Your job contains 1 sequence.
>psy17089
MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF
EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK
SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI
EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI
RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV
NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS
TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17089
(419 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P0A6P5 - symbol:der "50S ribosomal subunit stab... 606 1.1e-91 2
UNIPROTKB|Q9KTW7 - symbol:der "GTPase Der" species:243277... 584 1.9e-89 2
TIGR_CMR|VC_0763 - symbol:VC_0763 "GTP-binding protein" s... 584 1.9e-89 2
UNIPROTKB|Q47WC5 - symbol:der "GTPase Der" species:167879... 583 2.4e-89 2
TIGR_CMR|CPS_4247 - symbol:CPS_4247 "GTP-binding protein ... 583 2.4e-89 2
UNIPROTKB|Q8EC36 - symbol:der "GTPase Der" species:211586... 849 8.0e-85 1
TIGR_CMR|SO_3308 - symbol:SO_3308 "GTP-binding protein En... 849 8.0e-85 1
UNIPROTKB|Q83C83 - symbol:der "GTPase Der" species:227377... 835 2.4e-83 1
TIGR_CMR|CBU_1245 - symbol:CBU_1245 "GTP-binding protein"... 835 2.4e-83 1
UNIPROTKB|Q74AX4 - symbol:der "GTPase Der" species:243231... 703 2.4e-69 1
TIGR_CMR|GSU_2225 - symbol:GSU_2225 "GTP-binding protein ... 703 2.4e-69 1
TIGR_CMR|CHY_1919 - symbol:CHY_1919 "GTP-binding protein"... 652 6.0e-64 1
UNIPROTKB|Q3Z6P5 - symbol:der "GTPase Der" species:243164... 639 1.4e-62 1
TIGR_CMR|DET_1395 - symbol:DET_1395 "GTP-binding protein"... 639 1.4e-62 1
UNIPROTKB|Q81SW9 - symbol:der "GTPase Der" species:1392 "... 616 3.9e-60 1
TIGR_CMR|BA_1525 - symbol:BA_1525 "GTPase family protein"... 616 3.9e-60 1
UNIPROTKB|Q2GGW4 - symbol:engA "GTPase Der" species:20592... 555 1.1e-53 1
TIGR_CMR|ECH_0504 - symbol:ECH_0504 "GTP-binding protein ... 555 1.1e-53 1
UNIPROTKB|Q5LR04 - symbol:der "GTPase Der" species:246200... 325 1.9e-53 2
TIGR_CMR|SPO_2328 - symbol:SPO_2328 "GTP-binding protein ... 325 1.9e-53 2
UNIPROTKB|P64057 - symbol:der "GTPase Der" species:1773 "... 518 9.5e-50 1
UNIPROTKB|Q2GKV6 - symbol:der "GTPase Der" species:212042... 501 6.0e-48 1
TIGR_CMR|APH_0390 - symbol:APH_0390 "putative GTP-binding... 501 6.0e-48 1
DICTYBASE|DDB_G0279259 - symbol:DDB_G0279259 "putative GT... 491 1.4e-47 2
TAIR|locus:2099277 - symbol:emb2738 "embryo defective 273... 330 5.0e-46 2
GENEDB_PFALCIPARUM|PFL0835w - symbol:PFL0835w "GTP-bindin... 341 2.0e-44 2
UNIPROTKB|Q8I5N5 - symbol:PFL0835w "GTP binding protein, ... 341 2.0e-44 2
TIGR_CMR|CJE_0435 - symbol:CJE_0435 "GTPase family protei... 442 1.1e-41 1
UNIPROTKB|Q2GDM7 - symbol:NSE_0536 "GTPase Der" species:2... 383 1.9e-35 1
TIGR_CMR|NSE_0536 - symbol:NSE_0536 "putative GTP-binding... 383 1.9e-35 1
TIGR_CMR|CJE_1036 - symbol:CJE_1036 "tRNA modification GT... 218 2.1e-15 1
TIGR_CMR|GSU_3465 - symbol:GSU_3465 "tRNA modification GT... 217 3.0e-15 1
TIGR_CMR|CHY_0006 - symbol:CHY_0006 "tRNA modification GT... 209 2.7e-14 1
UNIPROTKB|Q74AX3 - symbol:era "GTPase Era" species:243231... 201 3.1e-14 1
TIGR_CMR|GSU_2226 - symbol:GSU_2226 "GTP-binding protein ... 201 3.1e-14 1
TIGR_CMR|BA_5734 - symbol:BA_5734 "tRNA modification GTPa... 202 1.7e-13 1
SGD|S000004625 - symbol:MSS1 "Mitochondrial protein" spec... 201 3.0e-13 1
TIGR_CMR|CHY_0430 - symbol:CHY_0430 "GTP-binding protein ... 183 5.7e-12 1
TIGR_CMR|NSE_0717 - symbol:NSE_0717 "tRNA modification GT... 190 5.7e-12 1
TIGR_CMR|CPS_4121 - symbol:CPS_4121 "GTP-binding protein ... 178 1.1e-11 2
TIGR_CMR|CBU_1922 - symbol:CBU_1922 "tRNA modification GT... 185 1.3e-11 2
TIGR_CMR|BA_4524 - symbol:BA_4524 "GTP-binding protein Er... 171 3.0e-11 2
UNIPROTKB|P75104 - symbol:mnmE "tRNA modification GTPase ... 180 5.0e-11 1
TAIR|locus:2029406 - symbol:AT1G78010 species:3702 "Arabi... 181 6.1e-11 1
TIGR_CMR|CPS_5049 - symbol:CPS_5049 "tRNA modification GT... 170 7.6e-10 1
WB|WBGene00009557 - symbol:F39B2.7 species:6239 "Caenorha... 169 8.5e-10 1
UNIPROTKB|Q9KPB3 - symbol:era "GTPase Era" species:243277... 164 1.5e-09 1
TIGR_CMR|VC_2460 - symbol:VC_2460 "GTP-binding protein Er... 164 1.5e-09 1
CGD|CAL0004408 - symbol:orf19.2042 species:5476 "Candida ... 168 1.6e-09 1
TIGR_CMR|APH_0350 - symbol:APH_0350 "GTP-binding protein ... 160 3.5e-09 1
DICTYBASE|DDB_G0288609 - symbol:eral1 "GTP-binding protei... 160 7.2e-09 1
UNIPROTKB|Q8EH80 - symbol:era "GTPase Era" species:211586... 156 1.4e-08 1
TIGR_CMR|SO_1349 - symbol:SO_1349 "GTP-binding protein Er... 156 1.4e-08 1
UNIPROTKB|P37214 - symbol:era "GTPase Era" species:210007... 154 1.6e-08 1
UNIPROTKB|Q9KVY5 - symbol:mnmE "tRNA modification GTPase ... 157 2.0e-08 1
TIGR_CMR|VC_0003 - symbol:VC_0003 "thiophene and furan ox... 157 2.0e-08 1
UNIPROTKB|Q5SM23 - symbol:era "GTPase Era" species:300852... 151 3.7e-08 1
FB|FBgn0039189 - symbol:CG18528 species:7227 "Drosophila ... 155 3.9e-08 1
TIGR_CMR|APH_1288 - symbol:APH_1288 "tRNA modification GT... 154 4.3e-08 1
TIGR_CMR|SO_0003 - symbol:SO_0003 "tRNA modification GTPa... 153 5.7e-08 1
UNIPROTKB|P25522 - symbol:mnmE "GTP-binding protein with ... 153 5.7e-08 1
UNIPROTKB|P06616 - symbol:era "GTP-binding protein" speci... 144 2.3e-07 1
ZFIN|ZDB-GENE-060526-84 - symbol:eral1 "Era G-protein-lik... 147 2.6e-07 1
TIGR_CMR|ECH_0476 - symbol:ECH_0476 "GTP-binding protein ... 142 3.8e-07 1
TIGR_CMR|SPO_3895 - symbol:SPO_3895 "tRNA modification GT... 141 1.1e-06 1
UNIPROTKB|P0A562 - symbol:era "GTPase Era" species:1773 "... 137 1.5e-06 1
GENEDB_PFALCIPARUM|PFD0530c - symbol:PFD0530c "Hypothetic... 149 1.8e-06 2
UNIPROTKB|Q9U0I1 - symbol:PFD0530c "Putative uncharacteri... 149 1.8e-06 2
TIGR_CMR|SPO_0691 - symbol:SPO_0691 "GTP-binding protein ... 136 1.9e-06 1
TAIR|locus:2154915 - symbol:AT5G66470 species:3702 "Arabi... 138 2.4e-06 1
RGD|1305367 - symbol:Gtpbp3 "GTP binding protein 3" speci... 133 1.1e-05 1
UNIPROTKB|Q7RM79 - symbol:PY02306 "Uncharacterized protei... 137 1.3e-05 2
POMBASE|SPAC222.05c - symbol:mss1 "mitochondrial GTPase (... 132 1.4e-05 1
TIGR_CMR|CJE_0763 - symbol:CJE_0763 "GTP-binding protein ... 128 1.4e-05 1
TIGR_CMR|CBU_1502 - symbol:CBU_1502 "GTP-binding protein ... 128 1.5e-05 1
UNIPROTKB|Q71ZH9 - symbol:LMOf2365_1510 "Putative GTPase"... 128 2.4e-05 1
TIGR_CMR|NSE_0959 - symbol:NSE_0959 "GTP-binding protein ... 126 2.8e-05 1
UNIPROTKB|Q5LW13 - symbol:engB "Probable GTP-binding prot... 121 3.7e-05 1
TIGR_CMR|SPO_0530 - symbol:SPO_0530 "GTP-binding protein"... 121 3.7e-05 1
UNIPROTKB|Q3ABV4 - symbol:CHY_1548 "GTP-binding protein" ... 126 4.6e-05 1
TIGR_CMR|CHY_1548 - symbol:CHY_1548 "GTP-binding protein"... 126 4.6e-05 1
UNIPROTKB|Q969Y2 - symbol:GTPBP3 "tRNA modification GTPas... 126 6.6e-05 1
UNIPROTKB|E1BH64 - symbol:E1BH64 "Uncharacterized protein... 125 8.5e-05 1
DICTYBASE|DDB_G0270228 - symbol:gtpbp3 "GTP-binding prote... 125 9.0e-05 1
TIGR_CMR|DET_1503 - symbol:DET_1503 "ferrous iron transpo... 125 0.00011 1
MGI|MGI:1917609 - symbol:Gtpbp3 "GTP binding protein 3" s... 124 0.00011 1
ASPGD|ASPL0000031943 - symbol:AN5518 species:162425 "Emer... 120 0.00016 1
TIGR_CMR|ECH_0060 - symbol:ECH_0060 "tRNA modification GT... 121 0.00020 1
UNIPROTKB|Q8EAH6 - symbol:hydF "Fe hydrogenase maturation... 120 0.00021 1
TIGR_CMR|SO_3926 - symbol:SO_3926 "GTP-binding protein" s... 120 0.00021 1
UNIPROTKB|B5X2B8 - symbol:eral1 "GTPase Era, mitochondria... 120 0.00027 1
UNIPROTKB|F1P349 - symbol:ERAL1 "GTPase Era, mitochondria... 119 0.00035 1
TIGR_CMR|GSU_1380 - symbol:GSU_1380 "ferrous iron transpo... 121 0.00036 1
ZFIN|ZDB-GENE-050522-335 - symbol:gtpbp3 "GTP binding pro... 118 0.00052 1
UNIPROTKB|E2RE04 - symbol:GTPBP3 "Uncharacterized protein... 115 0.00078 1
UNIPROTKB|Q81WJ8 - symbol:BAS3689 "Ribosome biogenesis GT... 112 0.00098 1
TIGR_CMR|BA_3976 - symbol:BA_3976 "GTPase family protein"... 112 0.00098 1
>UNIPROTKB|P0A6P5 [details] [associations]
symbol:der "50S ribosomal subunit stability factor"
species:83333 "Escherichia coli K-12" [GO:0005829 "cytosol"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0043022 GO:GO:0000027
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 PIR:F65027 RefSeq:NP_417006.2
RefSeq:YP_490739.1 ProteinModelPortal:P0A6P5 SMR:P0A6P5
DIP:DIP-48272N IntAct:P0A6P5 PaxDb:P0A6P5 PRIDE:P0A6P5
EnsemblBacteria:EBESCT00000000698 EnsemblBacteria:EBESCT00000017218
GeneID:12934159 GeneID:946983 KEGG:ecj:Y75_p2464 KEGG:eco:b2511
PATRIC:32120415 EchoBASE:EB3959 EcoGene:EG14207
BioCyc:EcoCyc:G7319-MONOMER BioCyc:ECOL316407:JW5403-MONOMER
BioCyc:MetaCyc:G7319-MONOMER Genevestigator:P0A6P5 Uniprot:P0A6P5
Length = 490
Score = 606 (218.4 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 117/236 (49%), Positives = 162/236 (68%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRDSI E + ++Y+LIDTAG+R+
Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRK 262
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
R K + +EKFSVIKTL++I +ANVV+L++DA++ IS QD+++ FI SGRSL++ VNK
Sbjct: 263 RGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNK 322
Query: 303 WDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTS 362
WD F+ FA +FISA+ + + + ES+ YDSS + TS
Sbjct: 323 WDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTS 382
Query: 363 RITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TR + A+++H P + R KL+YAH GG NPPI+VIHGN++K + + YKRYL
Sbjct: 383 MLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYL 438
Score = 327 (120.2 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 75/174 (43%), Positives = 100/174 (57%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ + G+ M +Q+ A VD R GL+ D+ I LR +P LV
Sbjct: 61 DG-TEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 XXXXX-XXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE 173
+DFY LG+G + I+A +G G+ + LE++L LP+ + +E
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQE 170
Score = 194 (73.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 53/168 (31%), Positives = 80/168 (47%)
Query: 3 PV-LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
P+ L +VGRPNVGKSTL NR+ +V + PG TRD Y + +++IDT G
Sbjct: 202 PIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVR 261
Query: 62 P--EVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVX- 118
++ + +T QA +D R+G+ +QD + F+ SG+ +V+V
Sbjct: 262 KRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVN 321
Query: 119 -----XXXXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LDF LG H ISAL+G+G+ N E++
Sbjct: 322 KWDGLSQEVKEQVKETLDF-RLGFIDFARVHFISALHGSGVGNLFESV 368
Score = 171 (65.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 43/120 (35%), Positives = 64/120 (53%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD E +++I IDT GI +
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI---D 61
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
T + +E ++L +I EA+VV+ ++DA+ + D IA + + + NK D
Sbjct: 62 GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTD 121
>UNIPROTKB|Q9KTW7 [details] [associations]
symbol:der "GTPase Der" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 584 (210.6 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 115/257 (44%), Positives = 165/257 (64%)
Query: 162 ELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
+L Y + + E+ + + IK+AI+G+PNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 186 QLEYSEEEAEAEYKRLQDLP-IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSI 244
Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
+ + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++DA++NIS Q
Sbjct: 245 YIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQ 304
Query: 282 DINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNI 341
D+++ F SGRS+++ VNKWD F+ FA +FISA+ +
Sbjct: 305 DLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGV 364
Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
ES+ Y S+ + TS +TR + A +H P + R KL+YAH GG NPPIIV
Sbjct: 365 GHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNPPIIV 424
Query: 402 IHGNRLKYIGNDYKRYL 418
IHGN++ + + YKRYL
Sbjct: 425 IHGNQVNELPDSYKRYL 441
Score = 328 (120.5 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 68/160 (42%), Positives = 98/160 (61%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ ++G+ +M +Q+ A VDGR GL D+ I LR+ +P +LV
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 XXXXXX-XXXLDFYELGIGNPHIISALYGNGIKNFLENIL 159
+F++LG+ + I+A +G G+ ++ +L
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVL 159
Score = 171 (65.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 50/168 (29%), Positives = 76/168 (45%)
Query: 3 PV-LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
P+ L ++GRPNVGKSTL NR+ +V + PG TRD Y ++ +++IDT G
Sbjct: 205 PIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVR 264
Query: 62 --PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVX- 118
+ + + +T QA VD R+ + +QD + F SG+ IV+
Sbjct: 265 RRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVN 324
Query: 119 -----XXXXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LD LG H ISAL+G G+ + E++
Sbjct: 325 KWDGLSFDVKEHVKKELD-RRLGFVDFARIHFISALHGTGVGHLFESV 371
Score = 170 (64.9 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD + ++I+IDT GI +
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI---D 61
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ E +E ++L +I EA+VV+ ++D + ++ D IA + + I+ VNK D
Sbjct: 62 GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVD 121
>TIGR_CMR|VC_0763 [details] [associations]
symbol:VC_0763 "GTP-binding protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 584 (210.6 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 115/257 (44%), Positives = 165/257 (64%)
Query: 162 ELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
+L Y + + E+ + + IK+AI+G+PNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 186 QLEYSEEEAEAEYKRLQDLP-IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSI 244
Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
+ + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++DA++NIS Q
Sbjct: 245 YIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQ 304
Query: 282 DINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNI 341
D+++ F SGRS+++ VNKWD F+ FA +FISA+ +
Sbjct: 305 DLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGV 364
Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
ES+ Y S+ + TS +TR + A +H P + R KL+YAH GG NPPIIV
Sbjct: 365 GHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNPPIIV 424
Query: 402 IHGNRLKYIGNDYKRYL 418
IHGN++ + + YKRYL
Sbjct: 425 IHGNQVNELPDSYKRYL 441
Score = 328 (120.5 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 68/160 (42%), Positives = 98/160 (61%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ ++G+ +M +Q+ A VDGR GL D+ I LR+ +P +LV
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 XXXXXX-XXXLDFYELGIGNPHIISALYGNGIKNFLENIL 159
+F++LG+ + I+A +G G+ ++ +L
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVL 159
Score = 171 (65.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 50/168 (29%), Positives = 76/168 (45%)
Query: 3 PV-LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
P+ L ++GRPNVGKSTL NR+ +V + PG TRD Y ++ +++IDT G
Sbjct: 205 PIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVR 264
Query: 62 --PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVX- 118
+ + + +T QA VD R+ + +QD + F SG+ IV+
Sbjct: 265 RRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVN 324
Query: 119 -----XXXXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LD LG H ISAL+G G+ + E++
Sbjct: 325 KWDGLSFDVKEHVKKELD-RRLGFVDFARIHFISALHGTGVGHLFESV 371
Score = 170 (64.9 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD + ++I+IDT GI +
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI---D 61
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ E +E ++L +I EA+VV+ ++D + ++ D IA + + I+ VNK D
Sbjct: 62 GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVD 121
>UNIPROTKB|Q47WC5 [details] [associations]
symbol:der "GTPase Der" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 583 (210.3 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 119/258 (46%), Positives = 164/258 (63%)
Query: 161 IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+EL ++ KK E + IK+AI+G+PNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 192 VELTEEELAKKLE-DEPQENDKIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS 250
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
+ E N ++Y LIDTAGIRRR +V+EK+SVIKTL++I +ANV +L++DAQ+ IS
Sbjct: 251 VYIPMERNGREYTLIDTAGIRRRKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISD 310
Query: 281 QDINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNN 340
QD+++ FI E+GRSL++ VNKWD F+ FA +FISA+
Sbjct: 311 QDLSLLGFILEAGRSLVLAVNKWDGLEDHEKDRIKTELDRRLGFIDFARVHFISALHGTG 370
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ES+ + S+ +ST+ +T+ L A+ +H P + R KL+YAH GG NPPII
Sbjct: 371 VGHLYESVEEAFVSATKRISTAMVTKILDMAVFDHQPPLHQGRRIKLKYAHAGGYNPPII 430
Query: 401 VIHGNRLKYIGNDYKRYL 418
+IHGN K + YKRYL
Sbjct: 431 IIHGNSAKKLPMSYKRYL 448
Score = 328 (120.5 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 74/162 (45%), Positives = 96/162 (59%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA+YPGLTRDR YG+ + + FI+IDTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ ++GI +M +Q+ A VD R GL D I + LRK + I +V
Sbjct: 61 NGD-EQGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIFVVANK 119
Query: 121 XXXXXXXXXL-DFYELGIG-NPHIISALYGNGIKNFLENILT 160
+ +FY LG+G + H I+A +G G+ L LT
Sbjct: 120 IDGIHGDSAVAEFYSLGLGEHVHQIAAAHGRGVTQLLTIALT 161
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 45/120 (37%), Positives = 67/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD E +I+IDT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGINGDE 64
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ +V K + ++L +I EA+ V+ L+DA+ ++A D IA+ + + + + V NK D
Sbjct: 65 QGIDV--KMAE-QSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIFVVANKID 121
Score = 161 (61.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 48/167 (28%), Positives = 77/167 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
L ++GRPNVGKSTL NR+ +V + PG TRD Y + + +IDT G
Sbjct: 215 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGIRR-- 272
Query: 65 KKGIMHEMTK----QTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+K + + K +T +A +D ++G+ +QD + F+ ++G+ +VL
Sbjct: 273 RKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISDQDLSLLGFILEAGRSLVLAVNK 332
Query: 121 ------XXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LD LG H ISAL+G G+ + E++
Sbjct: 333 WDGLEDHEKDRIKTELD-RRLGFIDFARVHFISALHGTGVGHLYESV 378
>TIGR_CMR|CPS_4247 [details] [associations]
symbol:CPS_4247 "GTP-binding protein EngA" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 583 (210.3 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 119/258 (46%), Positives = 164/258 (63%)
Query: 161 IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+EL ++ KK E + IK+AI+G+PNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 192 VELTEEELAKKLE-DEPQENDKIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS 250
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
+ E N ++Y LIDTAGIRRR +V+EK+SVIKTL++I +ANV +L++DAQ+ IS
Sbjct: 251 VYIPMERNGREYTLIDTAGIRRRKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISD 310
Query: 281 QDINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNN 340
QD+++ FI E+GRSL++ VNKWD F+ FA +FISA+
Sbjct: 311 QDLSLLGFILEAGRSLVLAVNKWDGLEDHEKDRIKTELDRRLGFIDFARVHFISALHGTG 370
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ES+ + S+ +ST+ +T+ L A+ +H P + R KL+YAH GG NPPII
Sbjct: 371 VGHLYESVEEAFVSATKRISTAMVTKILDMAVFDHQPPLHQGRRIKLKYAHAGGYNPPII 430
Query: 401 VIHGNRLKYIGNDYKRYL 418
+IHGN K + YKRYL
Sbjct: 431 IIHGNSAKKLPMSYKRYL 448
Score = 328 (120.5 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 74/162 (45%), Positives = 96/162 (59%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA+YPGLTRDR YG+ + + FI+IDTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ ++GI +M +Q+ A VD R GL D I + LRK + I +V
Sbjct: 61 NGD-EQGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIFVVANK 119
Query: 121 XXXXXXXXXL-DFYELGIG-NPHIISALYGNGIKNFLENILT 160
+ +FY LG+G + H I+A +G G+ L LT
Sbjct: 120 IDGIHGDSAVAEFYSLGLGEHVHQIAAAHGRGVTQLLTIALT 161
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 45/120 (37%), Positives = 67/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD E +I+IDT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGINGDE 64
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ +V K + ++L +I EA+ V+ L+DA+ ++A D IA+ + + + + V NK D
Sbjct: 65 QGIDV--KMAE-QSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIFVVANKID 121
Score = 161 (61.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 48/167 (28%), Positives = 77/167 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
L ++GRPNVGKSTL NR+ +V + PG TRD Y + + +IDT G
Sbjct: 215 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGIRR-- 272
Query: 65 KKGIMHEMTK----QTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+K + + K +T +A +D ++G+ +QD + F+ ++G+ +VL
Sbjct: 273 RKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISDQDLSLLGFILEAGRSLVLAVNK 332
Query: 121 ------XXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LD LG H ISAL+G G+ + E++
Sbjct: 333 WDGLEDHEKDRIKTELD-RRLGFIDFARVHFISALHGTGVGHLYESV 378
>UNIPROTKB|Q8EC36 [details] [associations]
symbol:der "GTPase Der" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_718862.1 ProteinModelPortal:Q8EC36
GeneID:1170993 KEGG:son:SO_3308 PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 183/438 (41%), Positives = 256/438 (58%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLR-KSGQPIVLVXX 119
+ ++GI +M +Q+ A D R GL D I LR + V+
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANK 119
Query: 120 XXXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
+F+ LG+G + ++A G G+ N +E LT PY + ++ E
Sbjct: 120 IDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGIERQGEEEE 176
Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+ +Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I E + ++Y++IDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ ++
Sbjct: 237 IYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296
Query: 281 QDINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNN 340
QD+ + F +GR+L++ VNKWD F+ FA +FISA+
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRY+
Sbjct: 417 VIHGNQVSKLPDSYKRYM 434
>TIGR_CMR|SO_3308 [details] [associations]
symbol:SO_3308 "GTP-binding protein EngA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 RefSeq:NP_718862.1
ProteinModelPortal:Q8EC36 GeneID:1170993 KEGG:son:SO_3308
PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 183/438 (41%), Positives = 256/438 (58%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLR-KSGQPIVLVXX 119
+ ++GI +M +Q+ A D R GL D I LR + V+
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANK 119
Query: 120 XXXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
+F+ LG+G + ++A G G+ N +E LT PY + ++ E
Sbjct: 120 IDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGIERQGEEEE 176
Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+ +Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I E + ++Y++IDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ ++
Sbjct: 237 IYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296
Query: 281 QDINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNN 340
QD+ + F +GR+L++ VNKWD F+ FA +FISA+
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRY+
Sbjct: 417 VIHGNQVSKLPDSYKRYM 434
>UNIPROTKB|Q83C83 [details] [associations]
symbol:der "GTPase Der" species:227377 "Coxiella burnetii
RSA 493" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 186/419 (44%), Positives = 245/419 (58%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFN LT SR ALVA+ PG+TRDR YGE I + +++DTGG
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL-VXX 119
K + Q +QA VD + GLV D++I LRK G+ I L V
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNK 120
Query: 120 XXXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
DFY+LG G P++I+A G G+K+ + +L LP +K +KE
Sbjct: 121 ADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLE-NLPEEKEVIEKEVG---- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+A++G+PNVGKSTLIN LLGE RVI YD PGTTRDSI F N++ Y LIDTAG
Sbjct: 176 ---IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K + +EKFS+IK+L+++ A+VVI LLDA+Q ++ QD+ + N I E+G SLI+
Sbjct: 233 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIA 292
Query: 300 VNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD F+ FA FISA+ + +I Y S L
Sbjct: 293 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+T ++TRAL A+ H P K R +LRYAH G ++P IV+HG + K + Y RYL
Sbjct: 353 TTGQLTRALEKAVAEHEPPLVKGRRIRLRYAHLGARHPLTIVVHGKQTKSLPQSYSRYL 411
>TIGR_CMR|CBU_1245 [details] [associations]
symbol:CBU_1245 "GTP-binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 186/419 (44%), Positives = 245/419 (58%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFN LT SR ALVA+ PG+TRDR YGE I + +++DTGG
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL-VXX 119
K + Q +QA VD + GLV D++I LRK G+ I L V
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNK 120
Query: 120 XXXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
DFY+LG G P++I+A G G+K+ + +L LP +K +KE
Sbjct: 121 ADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLE-NLPEEKEVIEKEVG---- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+A++G+PNVGKSTLIN LLGE RVI YD PGTTRDSI F N++ Y LIDTAG
Sbjct: 176 ---IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K + +EKFS+IK+L+++ A+VVI LLDA+Q ++ QD+ + N I E+G SLI+
Sbjct: 233 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIA 292
Query: 300 VNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD F+ FA FISA+ + +I Y S L
Sbjct: 293 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+T ++TRAL A+ H P K R +LRYAH G ++P IV+HG + K + Y RYL
Sbjct: 353 TTGQLTRALEKAVAEHEPPLVKGRRIRLRYAHLGARHPLTIVVHGKQTKSLPQSYSRYL 411
>UNIPROTKB|Q74AX4 [details] [associations]
symbol:der "GTPase Der" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 157/419 (37%), Positives = 235/419 (56%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y FI+IDTGGFEP
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEP 63
Query: 63 EVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIV-LVXXXX 121
E ++ +M +Q++ A +DGR GL D + LR+ +P+ +V
Sbjct: 64 ESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVFFVVNKVD 123
Query: 122 XXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
+FY LG+ N ISA + G+++ ++ ++ LP + T+
Sbjct: 124 GETLEVAASEFYSLGVDNLLTISAEHNRGVRDLMDEVVAA-LPQRT-------TSPEERN 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
K+A+VG+PNVGKS+L+N LLG RV+ TPGTTRDS+ + F N K+Y+LIDTAGIR
Sbjct: 176 ATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAGIR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
R+ KT + IEK+SV+ +L+SI A+VV+++L+A++ ++ QD IA + +E+G++ I VN
Sbjct: 236 RKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGKACIFVVN 295
Query: 302 KWDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD+ F L+F F+SA +N ME + V + +
Sbjct: 296 KWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKVMAQYVKRV 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + R +A+++H R K +A Q G PP VI NR + Y+RYL
Sbjct: 356 TTSELNRIFSAAVESHHHPLVMGRRVKFYFATQVGTRPPTFVIFTNRPDGMHFSYERYL 414
>TIGR_CMR|GSU_2225 [details] [associations]
symbol:GSU_2225 "GTP-binding protein Era, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 157/419 (37%), Positives = 235/419 (56%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y FI+IDTGGFEP
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEP 63
Query: 63 EVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIV-LVXXXX 121
E ++ +M +Q++ A +DGR GL D + LR+ +P+ +V
Sbjct: 64 ESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVFFVVNKVD 123
Query: 122 XXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
+FY LG+ N ISA + G+++ ++ ++ LP + T+
Sbjct: 124 GETLEVAASEFYSLGVDNLLTISAEHNRGVRDLMDEVVAA-LPQRT-------TSPEERN 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
K+A+VG+PNVGKS+L+N LLG RV+ TPGTTRDS+ + F N K+Y+LIDTAGIR
Sbjct: 176 ATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAGIR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
R+ KT + IEK+SV+ +L+SI A+VV+++L+A++ ++ QD IA + +E+G++ I VN
Sbjct: 236 RKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGKACIFVVN 295
Query: 302 KWDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD+ F L+F F+SA +N ME + V + +
Sbjct: 296 KWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKVMAQYVKRV 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + R +A+++H R K +A Q G PP VI NR + Y+RYL
Sbjct: 356 TTSELNRIFSAAVESHHHPLVMGRRVKFYFATQVGTRPPTFVIFTNRPDGMHFSYERYL 414
>TIGR_CMR|CHY_1919 [details] [associations]
symbol:CHY_1919 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0017111 eggNOG:COG1160 HOGENOM:HOG000242861
KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR RefSeq:YP_360738.1 ProteinModelPortal:Q3AAU6
STRING:Q3AAU6 GeneID:3728232 KEGG:chy:CHY_1919 PATRIC:21276929
BioCyc:CHYD246194:GJCN-1918-MONOMER Uniprot:Q3AAU6
Length = 440
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 152/423 (35%), Positives = 235/423 (55%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFNR+ R A+V + PG+TRDR Y E K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEWQGKVFDLIDTGGLE 62
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXX 121
+ I ++ +Q ++A D R+G+ D+ + LRKS +P++LV
Sbjct: 63 FS-EDLITTKVREQIEKAINEADLILFVCDSREGITSTDEAVAKNLRKSDKPVILVANKV 121
Query: 122 XXXXX--XXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
D Y LG+G P +SA G + + L+ +++ +L + + ++ +
Sbjct: 122 DDYLNPPANFYDLYRLGLGEPFPVSAANGTNVGDLLDLVIS-KLNFPEDYEDEN------ 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+A+VG+PNVGKS+L+N+LLGE RV+ D PGTTRD+I + Y K Y+LIDTAG
Sbjct: 175 -PVVKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E +E++SV +++K+I A+V +L++ A++ ++ QD IA I+E GR +I+
Sbjct: 234 MRRKSRIEEDLERYSVNRSIKAIRRADVALLVISAEEGVTEQDKKIAGLIHEYGRGVIIV 293
Query: 300 VNKWD--SXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD FL +A F+SA +N ME ++ V
Sbjct: 294 VNKWDLIEKDAKTADRYKEHIYFELGFLKYAPVIFVSAKTGQRLNKLMELVDRVSFEHQK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRP-KLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++TS + + L A+ +PP + RP K+ YA Q PP + N + + Y R
Sbjct: 354 RVATSILNQVLREAVVLNPPPADRG-RPLKIYYATQIETKPPTFALFVNDAELMHFSYLR 412
Query: 417 YLE 419
YLE
Sbjct: 413 YLE 415
>UNIPROTKB|Q3Z6P5 [details] [associations]
symbol:der "GTPase Der" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 134/419 (31%), Positives = 231/419 (55%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGE-GYIGKKSFIIIDTGGFE 61
P++ +VGR NVGKSTL NRL + A+ + PG TRDR + ++ ++ I++DTGG +
Sbjct: 6 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRR-LIMVDTGGLD 64
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXX 121
P+++ I ++ Q A VD + GL+ D + + +R++G+P++LV
Sbjct: 65 PDLESIIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTGKPVILVANKA 124
Query: 122 XXXXXXX-XLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+FY LG G P +ISA +G+GI + ++ +L ELP + +E ++
Sbjct: 125 DNLKMGQEAAEFYSLGFGEPSVISAFHGSGISDLMDRVLE-ELPDQPIATPEEDNSV--- 180
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
K+A+VG+ NVGKSTL+N+ +G+ R I + PGTTRD+I + +N +LIDTAGI
Sbjct: 181 ---KLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR K +EK+SV++ LK++ A++V+L++D ++ ++AQD +IA ++ ++ + +I+ +
Sbjct: 238 RRRGKVESGVEKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKGIIIIL 297
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD FL +A F+S +++ + V + +
Sbjct: 298 NKWDLGKGQDKAEVTQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKVQEERNKRIP 357
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+++ + A+ H P + + K+ YA Q NPP V N K + Y+R++E
Sbjct: 358 TAKVNSVVTEALSAHTPPHQGKTQLKIYYATQADTNPPSFVFFVNNPKLVHFSYERFIE 416
>TIGR_CMR|DET_1395 [details] [associations]
symbol:DET_1395 "GTP-binding protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 134/419 (31%), Positives = 231/419 (55%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGE-GYIGKKSFIIIDTGGFE 61
P++ +VGR NVGKSTL NRL + A+ + PG TRDR + ++ ++ I++DTGG +
Sbjct: 6 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRR-LIMVDTGGLD 64
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXX 121
P+++ I ++ Q A VD + GL+ D + + +R++G+P++LV
Sbjct: 65 PDLESIIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTGKPVILVANKA 124
Query: 122 XXXXXXX-XLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+FY LG G P +ISA +G+GI + ++ +L ELP + +E ++
Sbjct: 125 DNLKMGQEAAEFYSLGFGEPSVISAFHGSGISDLMDRVLE-ELPDQPIATPEEDNSV--- 180
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
K+A+VG+ NVGKSTL+N+ +G+ R I + PGTTRD+I + +N +LIDTAGI
Sbjct: 181 ---KLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR K +EK+SV++ LK++ A++V+L++D ++ ++AQD +IA ++ ++ + +I+ +
Sbjct: 238 RRRGKVESGVEKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKGIIIIL 297
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD FL +A F+S +++ + V + +
Sbjct: 298 NKWDLGKGQDKAEVTQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKVQEERNKRIP 357
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+++ + A+ H P + + K+ YA Q NPP V N K + Y+R++E
Sbjct: 358 TAKVNSVVTEALSAHTPPHQGKTQLKIYYATQADTNPPSFVFFVNNPKLVHFSYERFIE 416
>UNIPROTKB|Q81SW9 [details] [associations]
symbol:der "GTPase Der" species:1392 "Bacillus anthracis"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042254 RefSeq:NP_843976.1
RefSeq:YP_018148.1 RefSeq:YP_027683.1 ProteinModelPortal:Q81SW9
SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 139/421 (33%), Positives = 229/421 (54%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG +
Sbjct: 3 KPVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL-VXXX 120
+ + ++ +Q + A +GR G+ D+ + L +S +P+VL V
Sbjct: 63 IG-DEPFLTQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSNKPVVLAVNKV 121
Query: 121 XXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
DFY LG G P IS +G G+ + L+ + F K E +
Sbjct: 122 DNPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDEAA-------QHFPKIEEDG-YDE 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+ +++G+PNVGKS+L+N+LLG+ RVI + GTTRD++ + + + K Y++IDTAG+
Sbjct: 174 DTIRFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ L++I ++VV+++LD ++ I QD IA + ++SGR++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYAHDSGRAVVIVV 293
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+ F L +A F+SA + + I+ V +S I
Sbjct: 294 NKWDAVKKDEKTMKAFEENIRAHFQFLEYAPIVFLSAKTRKRTQTLIPVIDEVNESHSIR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ + ++ A+ +P R K+ YA Q PP V+ N + + Y+R+L
Sbjct: 354 IQTNVLNDVIMDAVAMNPTPTHNGSRLKIFYATQVAVKPPTFVVFVNDPELLHFSYERFL 413
Query: 419 E 419
+
Sbjct: 414 K 414
>TIGR_CMR|BA_1525 [details] [associations]
symbol:BA_1525 "GTPase family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0042254
RefSeq:NP_843976.1 RefSeq:YP_018148.1 RefSeq:YP_027683.1
ProteinModelPortal:Q81SW9 SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 139/421 (33%), Positives = 229/421 (54%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG +
Sbjct: 3 KPVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL-VXXX 120
+ + ++ +Q + A +GR G+ D+ + L +S +P+VL V
Sbjct: 63 IG-DEPFLTQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSNKPVVLAVNKV 121
Query: 121 XXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
DFY LG G P IS +G G+ + L+ + F K E +
Sbjct: 122 DNPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDEAA-------QHFPKIEEDG-YDE 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+ +++G+PNVGKS+L+N+LLG+ RVI + GTTRD++ + + + K Y++IDTAG+
Sbjct: 174 DTIRFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ L++I ++VV+++LD ++ I QD IA + ++SGR++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYAHDSGRAVVIVV 293
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+ F L +A F+SA + + I+ V +S I
Sbjct: 294 NKWDAVKKDEKTMKAFEENIRAHFQFLEYAPIVFLSAKTRKRTQTLIPVIDEVNESHSIR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ + ++ A+ +P R K+ YA Q PP V+ N + + Y+R+L
Sbjct: 354 IQTNVLNDVIMDAVAMNPTPTHNGSRLKIFYATQVAVKPPTFVVFVNDPELLHFSYERFL 413
Query: 419 E 419
+
Sbjct: 414 K 414
>UNIPROTKB|Q2GGW4 [details] [associations]
symbol:engA "GTPase Der" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 149/422 (35%), Positives = 225/422 (53%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VG PNVGKST+FNRLT+ + A+V+N P LTRDR G+ + F I+DTGG + +
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDNTI 63
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLI--TNFLRKS-GQPIVLVXXXX 121
K + + Q K + VD R + DK I +LRK +PI+L+
Sbjct: 64 KLSSL--VLDQVKLSIEESDIIFFVVDAR--IEHDDKNIEFAKYLRKKVKKPIILIANKC 119
Query: 122 XXXXXXXXLDF--YELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+D+ Y IG P ISA + G+ + E +L P F K+ + +
Sbjct: 120 ESQKRCYSIDYLGYFDFIG-PVYISAEHNLGLVDLYEALL----P---FIKEYDLNTL-D 170
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK++IVG+PN GKST IN LL ENR+I PGTTRDSI + Y +K+ LIDTAG
Sbjct: 171 LHNIKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K E IE SV KT++SI +++VIL++D+ I QD++IA + G+++I+
Sbjct: 231 MRKKAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKAIIIA 290
Query: 300 VNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNF-ISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD L+F + +SA+K N N +E+ +Y +
Sbjct: 291 LNKWDMIAKKDRSELLKDICNYNK-LNFKVPVIEVSALKNINCNKIIETSIELYKCLTMR 349
Query: 359 LSTSRITRALISAIKNH-PP-CRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+STS + + L A++ H PP C K++ K++Y Q PP + N I Y++
Sbjct: 350 ISTSVLNKWLKLAVEYHKPPLCNGKVV--KIKYITQVKVIPPTFIAVVNGSYSIDLTYRQ 407
Query: 417 YL 418
YL
Sbjct: 408 YL 409
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+K+AIVG PNVGKST+ N L + I + P TRD + + K+ ++DT G+
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV-N 301
K ++ +K SI E++++ ++DA+ ++I A ++ + + I+ + N
Sbjct: 62 TIKLSSLV--LDQVKL--SIEESDIIFFVVDARIEHDDKNIEFAKYLRKKVKKPIILIAN 117
Query: 302 KWDS 305
K +S
Sbjct: 118 KCES 121
>TIGR_CMR|ECH_0504 [details] [associations]
symbol:ECH_0504 "GTP-binding protein EngA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 149/422 (35%), Positives = 225/422 (53%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VG PNVGKST+FNRLT+ + A+V+N P LTRDR G+ + F I+DTGG + +
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDNTI 63
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLI--TNFLRKS-GQPIVLVXXXX 121
K + + Q K + VD R + DK I +LRK +PI+L+
Sbjct: 64 KLSSL--VLDQVKLSIEESDIIFFVVDAR--IEHDDKNIEFAKYLRKKVKKPIILIANKC 119
Query: 122 XXXXXXXXLDF--YELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+D+ Y IG P ISA + G+ + E +L P F K+ + +
Sbjct: 120 ESQKRCYSIDYLGYFDFIG-PVYISAEHNLGLVDLYEALL----P---FIKEYDLNTL-D 170
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK++IVG+PN GKST IN LL ENR+I PGTTRDSI + Y +K+ LIDTAG
Sbjct: 171 LHNIKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K E IE SV KT++SI +++VIL++D+ I QD++IA + G+++I+
Sbjct: 231 MRKKAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKAIIIA 290
Query: 300 VNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNF-ISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD L+F + +SA+K N N +E+ +Y +
Sbjct: 291 LNKWDMIAKKDRSELLKDICNYNK-LNFKVPVIEVSALKNINCNKIIETSIELYKCLTMR 349
Query: 359 LSTSRITRALISAIKNH-PP-CRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+STS + + L A++ H PP C K++ K++Y Q PP + N I Y++
Sbjct: 350 ISTSVLNKWLKLAVEYHKPPLCNGKVV--KIKYITQVKVIPPTFIAVVNGSYSIDLTYRQ 407
Query: 417 YL 418
YL
Sbjct: 408 YL 409
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+K+AIVG PNVGKST+ N L + I + P TRD + + K+ ++DT G+
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV-N 301
K ++ +K SI E++++ ++DA+ ++I A ++ + + I+ + N
Sbjct: 62 TIKLSSLV--LDQVKL--SIEESDIIFFVVDARIEHDDKNIEFAKYLRKKVKKPIILIAN 117
Query: 302 KWDS 305
K +S
Sbjct: 118 KCES 121
>UNIPROTKB|Q5LR04 [details] [associations]
symbol:der "GTPase Der" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 325 (119.5 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 79/238 (33%), Positives = 122/238 (51%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++VA+VG+PN GKSTLIN +LGE+R++T G TRD+I ++N+ + DTAG+R+
Sbjct: 203 LQVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRK 262
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
+ K E +EK SV L+++ A VV++LLDA QD+ IA+ GR++++ VNK
Sbjct: 263 KAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAVNK 322
Query: 303 WDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
WD L A +SA + ++I ++ +
Sbjct: 323 WDVEENKQDKLRELKESFERLLPQLRGAPLVTVSAKTGRGLERLHDAILRAHEVWNRRIP 382
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T+ + R LI ++ HPP + R KLRY Q PP V+ + + Y RYL
Sbjct: 383 TAALNRWLIGMLEQHPPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPESYSRYL 440
Score = 248 (92.4 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 56/160 (35%), Positives = 81/160 (50%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M L +VGRPNVGKSTLFNRL R ALV + PG+TRD G+ +G F +IDT G
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
E + M + T++A +D R G+ D++ + LR+ ++L
Sbjct: 61 ETATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANK 120
Query: 121 XXXXXXXXX-LDFYELGIGNPHIISALYGNGIKNFLENIL 159
++ Y LG+G P +SA +G G+ N L +L
Sbjct: 121 AEGAAADAGVIEAYGLGLGEPIRLSAEHGEGL-NELYAVL 159
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ +AIVG+PNVGKSTL N L+G+ + D PG TRD + + ++ +IDTAG+
Sbjct: 3 LTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGLE- 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
T + ++ T +++ A++ + ++DA+ ++ D A+ + +I+ NK
Sbjct: 62 -TATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANK 120
>TIGR_CMR|SPO_2328 [details] [associations]
symbol:SPO_2328 "GTP-binding protein EngA" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 325 (119.5 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 79/238 (33%), Positives = 122/238 (51%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++VA+VG+PN GKSTLIN +LGE+R++T G TRD+I ++N+ + DTAG+R+
Sbjct: 203 LQVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRK 262
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
+ K E +EK SV L+++ A VV++LLDA QD+ IA+ GR++++ VNK
Sbjct: 263 KAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAVNK 322
Query: 303 WDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
WD L A +SA + ++I ++ +
Sbjct: 323 WDVEENKQDKLRELKESFERLLPQLRGAPLVTVSAKTGRGLERLHDAILRAHEVWNRRIP 382
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T+ + R LI ++ HPP + R KLRY Q PP V+ + + Y RYL
Sbjct: 383 TAALNRWLIGMLEQHPPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPESYSRYL 440
Score = 248 (92.4 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 56/160 (35%), Positives = 81/160 (50%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M L +VGRPNVGKSTLFNRL R ALV + PG+TRD G+ +G F +IDT G
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
E + M + T++A +D R G+ D++ + LR+ ++L
Sbjct: 61 ETATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANK 120
Query: 121 XXXXXXXXX-LDFYELGIGNPHIISALYGNGIKNFLENIL 159
++ Y LG+G P +SA +G G+ N L +L
Sbjct: 121 AEGAAADAGVIEAYGLGLGEPIRLSAEHGEGL-NELYAVL 159
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ +AIVG+PNVGKSTL N L+G+ + D PG TRD + + ++ +IDTAG+
Sbjct: 3 LTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGLE- 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
T + ++ T +++ A++ + ++DA+ ++ D A+ + +I+ NK
Sbjct: 62 -TATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANK 120
>UNIPROTKB|P64057 [details] [associations]
symbol:der "GTPase Der" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0042254 EMBL:BX842577 GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:H70504 RefSeq:NP_216229.1 RefSeq:NP_336210.1
RefSeq:YP_006515108.1 ProteinModelPortal:P64057 SMR:P64057
PRIDE:P64057 EnsemblBacteria:EBMYCT00000000320
EnsemblBacteria:EBMYCT00000071863 GeneID:13316498 GeneID:885086
GeneID:923951 KEGG:mtc:MT1753 KEGG:mtu:Rv1713 KEGG:mtv:RVBD_1713
PATRIC:18125608 TubercuList:Rv1713 OMA:NCFLVIN ProtClustDB:PRK03003
Uniprot:P64057
Length = 463
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 130/419 (31%), Positives = 208/419 (49%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRH-YGEGYIGKKSFIIIDTGGFE 61
PV+ +VGRPNVGKSTL NR+ R+A+V + PG+TRDR Y + G++ F++ DTGG+E
Sbjct: 27 PVVAVVGRPNVGKSTLVNRILGRREAVVQDIPGVTRDRVCYDALWTGRR-FVVQDTGGWE 85
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXX 121
P K G+ + +Q A VD G D+ L +SG+P+ L
Sbjct: 86 PNAK-GLQRLVAEQASVAMRTADAVILVVDAGVGATAADEAAARILLRSGKPVFLAANKV 144
Query: 122 XXXXXXX-XLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ LG+G PH ISA++G G+ + L+ +L LP + E +
Sbjct: 145 DSEKGESDAAALWSLGLGEPHAISAMHGRGVADLLDGVLAA-LP-----EVGESASASGG 198
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+VA+VGKPNVGKS+L+N L G+ R + ++ GTT D + SL E + +DTAG+
Sbjct: 199 PR-RVALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIELGGDVWRFVDTAGL 257
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ E ++ ++T +I A V I+L+DA Q ++ QD+ + + + E+GR+L++
Sbjct: 258 RRKVGQASGHEFYASVRTHAAIDSAEVAIVLIDASQPLTEQDLRVISMVIEAGRALVLAY 317
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD + +A ISA ++ + ++ S ++
Sbjct: 318 NKWDLVDEDRRELLQREIDRELVQVRWAQRVNISAKTGRAVHKLVPAMEDALASWDTRIA 377
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T + L PP + +P++ +A Q PP V+ G Y+R+LE
Sbjct: 378 TGPLNTWLTEVTAATPPPVRGGKQPRILFATQATARPPTFVLFTTGFLEAG--YRRFLE 434
>UNIPROTKB|Q2GKV6 [details] [associations]
symbol:der "GTPase Der" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 135/420 (32%), Positives = 214/420 (50%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYG-EGYIGKKSFIIIDTGGFEPE 63
+ +VG PNVGKSTLFNRLT + A+V++ +TRDR + G + FI IDTGG
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLR-FIAIDTGGV--- 59
Query: 64 VKKGIMHEMTK-QTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK-SGQPIVLVXXXX 121
G + + K Q + A +D ++ + +L K + +PI+LV
Sbjct: 60 ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIILVANKC 119
Query: 122 XXXXXXXXLDFYE-LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+D E LG P ISA + G+ + E I + ++ E
Sbjct: 120 ESNKNNVHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPL-------IEQSERPKKDQD 172
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I ++I+G+PNVGKST +NS+LGE RVIT GTTRDSI + + Y +L DTAGI
Sbjct: 173 RPIAISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAEYSYKGITLLLTDTAGI 232
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K E +EK SV + ++ +++VVIL++D Q IS QD++IA+ + G+ +++ +
Sbjct: 233 RKRTKVTENMEKLSVQSAIHALSKSHVVILIVDFTQGISQQDLSIASTAIKDGKGIVLAL 292
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAM-FNFISAIKLNNINSFMESINHVYDSSIIHL 359
NK D + F + +SA++ + + +Y+S+ H+
Sbjct: 293 NKADLVNDKAAEDAILNAIRQYSRVDFDVPIMKMSALENIGCDKVLSKAVKIYESASTHI 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS++ + L +AI HPP + + +L+Y Q PP VI N + + + Y+ YL+
Sbjct: 353 STSKLNKWLGTAIDYHPPHLQNKKKVRLKYISQVSTLPPTFVIATNSTE-VESTYQTYLK 411
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/125 (34%), Positives = 72/125 (57%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
KVAIVG PNVGKSTL N L I D TRD ++L ++ ++I IDT G+
Sbjct: 3 KVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADG 62
Query: 244 NKTFEVIEKFSVIKT-LKSILE-ANVVILLLDAQQNISAQDINIANFIYE-SGRSLIVCV 300
+ I+ S++KT ++ LE A+VV+ ++DAQ+ + ++ ++ + + + +I+
Sbjct: 63 GE----IQ--SLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIILVA 116
Query: 301 NKWDS 305
NK +S
Sbjct: 117 NKCES 121
>TIGR_CMR|APH_0390 [details] [associations]
symbol:APH_0390 "putative GTP-binding protein EngA"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 135/420 (32%), Positives = 214/420 (50%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYG-EGYIGKKSFIIIDTGGFEPE 63
+ +VG PNVGKSTLFNRLT + A+V++ +TRDR + G + FI IDTGG
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLR-FIAIDTGGV--- 59
Query: 64 VKKGIMHEMTK-QTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK-SGQPIVLVXXXX 121
G + + K Q + A +D ++ + +L K + +PI+LV
Sbjct: 60 ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIILVANKC 119
Query: 122 XXXXXXXXLDFYE-LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+D E LG P ISA + G+ + E I + ++ E
Sbjct: 120 ESNKNNVHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPL-------IEQSERPKKDQD 172
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I ++I+G+PNVGKST +NS+LGE RVIT GTTRDSI + + Y +L DTAGI
Sbjct: 173 RPIAISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAEYSYKGITLLLTDTAGI 232
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K E +EK SV + ++ +++VVIL++D Q IS QD++IA+ + G+ +++ +
Sbjct: 233 RKRTKVTENMEKLSVQSAIHALSKSHVVILIVDFTQGISQQDLSIASTAIKDGKGIVLAL 292
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAM-FNFISAIKLNNINSFMESINHVYDSSIIHL 359
NK D + F + +SA++ + + +Y+S+ H+
Sbjct: 293 NKADLVNDKAAEDAILNAIRQYSRVDFDVPIMKMSALENIGCDKVLSKAVKIYESASTHI 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS++ + L +AI HPP + + +L+Y Q PP VI N + + + Y+ YL+
Sbjct: 353 STSKLNKWLGTAIDYHPPHLQNKKKVRLKYISQVSTLPPTFVIATNSTE-VESTYQTYLK 411
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/125 (34%), Positives = 72/125 (57%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
KVAIVG PNVGKSTL N L I D TRD ++L ++ ++I IDT G+
Sbjct: 3 KVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADG 62
Query: 244 NKTFEVIEKFSVIKT-LKSILE-ANVVILLLDAQQNISAQDINIANFIYE-SGRSLIVCV 300
+ I+ S++KT ++ LE A+VV+ ++DAQ+ + ++ ++ + + + +I+
Sbjct: 63 GE----IQ--SLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIILVA 116
Query: 301 NKWDS 305
NK +S
Sbjct: 117 NKCES 121
>DICTYBASE|DDB_G0279259 [details] [associations]
symbol:DDB_G0279259 "putative GTP-binding protein"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0279259 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AAFI02000030 eggNOG:COG1160 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
RefSeq:XP_641756.1 ProteinModelPortal:Q54X21 STRING:Q54X21
EnsemblProtists:DDB0205682 GeneID:8621954 KEGG:ddi:DDB_G0279259
InParanoid:Q54X21 Uniprot:Q54X21
Length = 841
Score = 491 (177.9 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 121/320 (37%), Positives = 183/320 (57%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNS-RDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
KPV+ ++G+PNVGKST+FNR+ R ALV PG TRDR+YGEG++ + FI++DTGG
Sbjct: 152 KPVIAIIGKPNVGKSTIFNRIIEGQRRALVEEIPGTTRDRYYGEGFLYGREFILVDTGGL 211
Query: 61 EPEVKKG---IMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLR----KSGQP 113
E K+ + Q + A +D + GL DK + LR K G+P
Sbjct: 212 IGESKEDKDQFQGVIQDQAEIAMEEADAILFVLDYKSGLTSIDKELARMLRSKRQKLGKP 271
Query: 114 IVLVXXXXXXXXXXXXLDFYE-------LGIGNPHIISALYGNGIKNFLENILTIELPYK 166
I + DF E LG G P SA +G+ + + E IL+ + P+
Sbjct: 272 IY-IGVNKADNVSMRGEDFEEMKTQITRLGFGEPIPFSAHHGDNVHSMFELILS-QFPHM 329
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+K ++ I+++IVG+PN GKS+L+N ++ E R I D PGTT D + F
Sbjct: 330 DLSLEKLEEDLKPGP-IRISIVGQPNAGKSSLLNKIIEEERSIVSDIPGTTHDPVDCNFL 388
Query: 227 YNNKKYI-LIDTAGIRRRNKTFEV-IEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
+ + + LIDTAGIRRR+ T ++ +EK SV+ LK+I +++VV +++DA I+ QD+
Sbjct: 389 WRDTHELSLIDTAGIRRRS-THKIGLEKSSVLWALKAIEKSHVVFIVIDATIGITEQDLK 447
Query: 285 IANFIYESGRSLIVCVNKWD 304
IA+F+ E+ +S+I+ VNKWD
Sbjct: 448 IASFVVENRKSMIIIVNKWD 467
Score = 37 (18.1 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 386 KLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
KL++A Q PP V N + R+L
Sbjct: 765 KLKFAQQARGYPPTFVFWVNHPDNVEPSVVRFL 797
>TAIR|locus:2099277 [details] [associations]
symbol:emb2738 "embryo defective 2738" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG1160 HOGENOM:HOG000242861 OMA:IEWISSS Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
EMBL:BT046184 IPI:IPI00529367 RefSeq:NP_187815.2 UniGene:At.21430
ProteinModelPortal:B5X565 SMR:B5X565 STRING:B5X565 PaxDb:B5X565
PRIDE:B5X565 EnsemblPlants:AT3G12080.1 GeneID:820382
KEGG:ath:AT3G12080 TAIR:At3g12080 PhylomeDB:B5X565
ProtClustDB:CLSN2918072 Genevestigator:B5X565 Uniprot:B5X565
Length = 663
Score = 330 (121.2 bits), Expect = 5.0e-46, Sum P(2) = 5.0e-46
Identities = 106/361 (29%), Positives = 172/361 (47%)
Query: 74 KQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK--SGQPIVLVXXXXXX--XXXXXX 129
KQ A VDG+ G D I ++LRK S + I+L
Sbjct: 259 KQATAAVDESAVIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQA 318
Query: 130 LDFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNIHSIEYIK-VA 186
+F+ LG P ISAL G G L+ + + I+L + +++E N YI +A
Sbjct: 319 SEFWSLGF-TPIPISALSGTGTGELLDLVCSGLIKLEIMENIEEEEEEN-----YIPAIA 372
Query: 187 IVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY-NNKKYILIDTAGIRRRNK 245
I+G+PNVGKS+++N+L+ E+R I GTTRD+I + F + +K+ LIDTAGIR+++
Sbjct: 373 IIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRKKSS 432
Query: 246 TFE---VIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
E SV + ++I ++VV L+++A I+ QD+ IA I G+ +V VNK
Sbjct: 433 VASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKGCLVVVNK 492
Query: 303 WDSX---XXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
WD+ L +A + +AI +++++ + + V L
Sbjct: 493 WDTIPNKNQETAAHYEDDVREKLRSLKWAPIVYSTAITGHSVDNIVVAAATVQKERSRRL 552
Query: 360 STSRITRALISAIK-NHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+ + + + A+ PP + R ++ Y Q PP V N K + Y+RY+
Sbjct: 553 STAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFSDTYRRYM 612
Query: 419 E 419
E
Sbjct: 613 E 613
Score = 185 (70.2 bits), Expect = 5.0e-46, Sum P(2) = 5.0e-46
Identities = 36/74 (48%), Positives = 47/74 (63%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKS LFNRL A+V + PG+TRDR YG Y G + F+++DTGG
Sbjct: 161 VAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVS 220
Query: 65 KK--GIMHEMTKQT 76
K G+M E+ T
Sbjct: 221 KSPSGVMEELNVST 234
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
K+ K + H ++ +VAIVG+PNVGKS L N L+GENR I D PG TRD +
Sbjct: 144 KRLAKNTQQIPEHLLQ--RVAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRS 201
Query: 226 EYNNKKYILIDTAGIRRRNKTFE-VIEKFSVIKTL 259
+ +++++++DT G+ +K+ V+E+ +V T+
Sbjct: 202 YWGDQEFVVVDTGGVMTVSKSPSGVMEELNVSTTI 236
>GENEDB_PFALCIPARUM|PFL0835w [details] [associations]
symbol:PFL0835w "GTP-binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 341 (125.1 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 92/298 (30%), Positives = 142/298 (47%)
Query: 131 DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGK 190
+F+ LG GNP S ++GNG+ L+ + K +E +I+ I ++ +GK
Sbjct: 524 EFWSLGFGNPFPCSGIHGNGLSEILDECIK---HIDKIKINEEHDDINEQNTINISFIGK 580
Query: 191 PNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL--FEYNNKKYILIDTAGIRRRNKT-- 246
PN GKS+++N +L NR I GTT DSI L + +++ Y LIDTAGI++R K
Sbjct: 581 PNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYRLIDTAGIQKRKKNVP 640
Query: 247 FEVIEKFSVI---KTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
F K+ + +T K+I ++V IL++D+ IS QDINIA I + +S I+C NKW
Sbjct: 641 FNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIARKIVQENKSCIICCNKW 700
Query: 304 DSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLST 361
D + F+ FISA + + Y + ++T
Sbjct: 701 DLIYNKNDIFNDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNIFHLAEETYKNYTKRVNT 760
Query: 362 SRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+ + + A+ PP K + YA Q PP V N K + +Y +YLE
Sbjct: 761 NTLNDIIKEALLLRPPIPIKNKSLNIYYAFQSHIKPPSFVFFCNSEKSVYANYTKYLE 818
Score = 164 (62.8 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 44/109 (40%), Positives = 59/109 (54%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNS-RDALVANYPGLTRDRHYGE-GYIGKKSFIIIDTGGF 60
P++ ++GRPNVGKST+FNRLT +D + TRD+ YGE + G K F ++DTGG
Sbjct: 309 PLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDVSSTRDKLYGEVEWEGYK-FELVDTGGL 367
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK 109
E +K E+ Q A VDG G+ +D I FLRK
Sbjct: 368 VFEQEK-FSKEIKDQILMALKESSVVIFVVDGIHGVDPRDIEICRFLRK 415
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/123 (31%), Positives = 66/123 (53%)
Query: 170 KKKEFTNIHSIEYIK-VAIVGKPNVGKSTLINSLLG--ENRVITYDTPGTTRDSIKSLFE 226
KKK+ ++ I + ++I+G+PNVGKST+ N L ++ I D +TRD + E
Sbjct: 295 KKKKDVELNIIRNLPLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDV-SSTRDKLYGEVE 353
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
+ K+ L+DT G+ + F K ++ LK E++VVI ++D + +DI I
Sbjct: 354 WEGYKFELVDTGGLVFEQEKFSKEIKDQILMALK---ESSVVIFVVDGIHGVDPRDIEIC 410
Query: 287 NFI 289
F+
Sbjct: 411 RFL 413
Score = 38 (18.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 151 IKNFLENILTIELPYKKFFKKKE 173
I FL + ++ P K+ KKE
Sbjct: 409 ICRFLRKYILLKHPQGKYINKKE 431
>UNIPROTKB|Q8I5N5 [details] [associations]
symbol:PFL0835w "GTP binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 341 (125.1 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 92/298 (30%), Positives = 142/298 (47%)
Query: 131 DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGK 190
+F+ LG GNP S ++GNG+ L+ + K +E +I+ I ++ +GK
Sbjct: 524 EFWSLGFGNPFPCSGIHGNGLSEILDECIK---HIDKIKINEEHDDINEQNTINISFIGK 580
Query: 191 PNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL--FEYNNKKYILIDTAGIRRRNKT-- 246
PN GKS+++N +L NR I GTT DSI L + +++ Y LIDTAGI++R K
Sbjct: 581 PNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYRLIDTAGIQKRKKNVP 640
Query: 247 FEVIEKFSVI---KTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
F K+ + +T K+I ++V IL++D+ IS QDINIA I + +S I+C NKW
Sbjct: 641 FNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIARKIVQENKSCIICCNKW 700
Query: 304 DSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLST 361
D + F+ FISA + + Y + ++T
Sbjct: 701 DLIYNKNDIFNDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNIFHLAEETYKNYTKRVNT 760
Query: 362 SRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+ + + A+ PP K + YA Q PP V N K + +Y +YLE
Sbjct: 761 NTLNDIIKEALLLRPPIPIKNKSLNIYYAFQSHIKPPSFVFFCNSEKSVYANYTKYLE 818
Score = 164 (62.8 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 44/109 (40%), Positives = 59/109 (54%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNS-RDALVANYPGLTRDRHYGE-GYIGKKSFIIIDTGGF 60
P++ ++GRPNVGKST+FNRLT +D + TRD+ YGE + G K F ++DTGG
Sbjct: 309 PLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDVSSTRDKLYGEVEWEGYK-FELVDTGGL 367
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK 109
E +K E+ Q A VDG G+ +D I FLRK
Sbjct: 368 VFEQEK-FSKEIKDQILMALKESSVVIFVVDGIHGVDPRDIEICRFLRK 415
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/123 (31%), Positives = 66/123 (53%)
Query: 170 KKKEFTNIHSIEYIK-VAIVGKPNVGKSTLINSLLG--ENRVITYDTPGTTRDSIKSLFE 226
KKK+ ++ I + ++I+G+PNVGKST+ N L ++ I D +TRD + E
Sbjct: 295 KKKKDVELNIIRNLPLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDV-SSTRDKLYGEVE 353
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
+ K+ L+DT G+ + F K ++ LK E++VVI ++D + +DI I
Sbjct: 354 WEGYKFELVDTGGLVFEQEKFSKEIKDQILMALK---ESSVVIFVVDGIHGVDPRDIEIC 410
Query: 287 NFI 289
F+
Sbjct: 411 RFL 413
Score = 38 (18.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 151 IKNFLENILTIELPYKKFFKKKE 173
I FL + ++ P K+ KKE
Sbjct: 409 ICRFLRKYILLKHPQGKYINKKE 431
>TIGR_CMR|CJE_0435 [details] [associations]
symbol:CJE_0435 "GTPase family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0042254 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_178454.1 HSSP:Q9X1F8
ProteinModelPortal:Q5HW81 STRING:Q5HW81 GeneID:3231197
KEGG:cjr:CJE0435 PATRIC:20042570 OMA:YLENTYR
BioCyc:CJEJ195099:GJC0-440-MONOMER Uniprot:Q5HW81
Length = 460
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 120/434 (27%), Positives = 216/434 (49%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
++L+G+PNVGKS+LFNR+ R A+ ++ G TRD + + +I K ++ID+GG +
Sbjct: 4 IILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQIHIHSKKAMLIDSGGLDESD 63
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXXX 124
+ + + K T + VDG+ ++D+ L+K G+PI LV
Sbjct: 64 E--LFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFYSLKKLGKPIALVINKVDNK 121
Query: 125 XXXXXL-DFYELGIGNPHIISALYGNGIKN---FLENILTIE--LP--------YKKFFK 170
+F G+ +S + G+ +LE L E +P + ++++
Sbjct: 122 KDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFLHEEFLIPDEEENLEDFLEYYE 181
Query: 171 K-KEFTNIHSIE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
+ KEF ++ +I+V IVG+ NVGKS+L+N+L+ + R + GTT D + +
Sbjct: 182 EGKEF-QFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVH 240
Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
+K +DTAGIR+R K + +E+F++ +T K + + + +L+LDA + + D IA
Sbjct: 241 KDKVIEFVDTAGIRKRGK-IQGLERFALNRTEKILSHSQIALLVLDAHEGFNELDERIAG 299
Query: 288 FIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMES 347
+ + +I+ +NKWD FL++A +SA+ ++ ++
Sbjct: 300 LVAKHYLGVIIVLNKWDKSEMDFDKTVKELRLDRFKFLAYAPVISVSALSGKRVHVLLDK 359
Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRK--KLIRPKLRYAHQGGKNPPIIVIHGN 405
I ++++ + TS++ + +A + HP KL+ K+ YA Q PP I + N
Sbjct: 360 ILQIFENFTQKIQTSKLNTLIENATRAHPLPHDYGKLV--KIYYAVQYDLAPPKIALIMN 417
Query: 406 RLKYIGNDYKRYLE 419
R K + YKRYL+
Sbjct: 418 RPKALHFSYKRYLQ 431
>UNIPROTKB|Q2GDM7 [details] [associations]
symbol:NSE_0536 "GTPase Der" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 114/422 (27%), Positives = 201/422 (47%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGK-KSFIIIDTGGFEPEVK 65
+VG+ NVGKSTLFN++ + ++ + G+TRD + KS +++DT GF P+
Sbjct: 9 IVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNPQ-- 66
Query: 66 KGIMH-EMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSG--QPIVLVXXXXX 122
H E ++T+ A +D + + +D L N+LR++ IVLV
Sbjct: 67 ----HPETVERTEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVLVCNKSD 120
Query: 123 XXXXXXXLDFYELGIGNPHIISALYGNGIK---NFLENILTIELPYKKFFKKKEFTNIHS 179
D G N +ISA + G++ +++E+ + +L K +++
Sbjct: 121 RKDRD---DCSLFGFQNVFLISAEHSLGLRELISYIESFIPEQLDTPKNGSEEQ------ 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+G+PNVGKS+L+N +G++RV+ GTTRD I ++ + L+DTAG
Sbjct: 172 -RRIKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQWKCTTFELVDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ-NISAQDINIANFIYESGRSLIV 298
+R++ + + +EK + L++ E++VVI + D + QD + N I E G+ +I+
Sbjct: 231 LRKKQRVTDGLEKICNSRALRTSAESDVVIFMCDISNFTLERQDFLLMNRILEQGKPMIL 290
Query: 299 CVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFN--FISAIKLNNINSFMESINHVYDSSI 356
NK D+ L + FIS + + + ++ ++D S
Sbjct: 291 VGNKKDAVDAIELENIKDFISLQAQKLIASQIPIFFISCLHEGDFSYILDECRRLHDDSK 350
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++ST R+ L ++ HP KL+Y + N + V+ NR + + Y
Sbjct: 351 RNISTHRLNMWLQEIVRRHPHPMVNSKAVKLKYIKKL-LNKFVFVLSANRPELVAESYLN 409
Query: 417 YL 418
Y+
Sbjct: 410 YV 411
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI-KSLFEYNNKKYILIDTAGIRR 242
+V+IVGK NVGKSTL N + E R IT D G TRD + + + + K +L+DTAG
Sbjct: 6 RVSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNP 65
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES-GRSLIVCV- 300
++ E +E+ T +I E+++V+ ++D I ++D+ AN++ + G S IV V
Sbjct: 66 QHP--ETVER-----TEYAIKESDMVLFVID--NKIDSEDMLFANWLRRNAGNSKIVLVC 116
Query: 301 NKWD 304
NK D
Sbjct: 117 NKSD 120
>TIGR_CMR|NSE_0536 [details] [associations]
symbol:NSE_0536 "putative GTP-binding protein EngA"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0005525
"GTP binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 114/422 (27%), Positives = 201/422 (47%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGK-KSFIIIDTGGFEPEVK 65
+VG+ NVGKSTLFN++ + ++ + G+TRD + KS +++DT GF P+
Sbjct: 9 IVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNPQ-- 66
Query: 66 KGIMH-EMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSG--QPIVLVXXXXX 122
H E ++T+ A +D + + +D L N+LR++ IVLV
Sbjct: 67 ----HPETVERTEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVLVCNKSD 120
Query: 123 XXXXXXXLDFYELGIGNPHIISALYGNGIK---NFLENILTIELPYKKFFKKKEFTNIHS 179
D G N +ISA + G++ +++E+ + +L K +++
Sbjct: 121 RKDRD---DCSLFGFQNVFLISAEHSLGLRELISYIESFIPEQLDTPKNGSEEQ------ 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+G+PNVGKS+L+N +G++RV+ GTTRD I ++ + L+DTAG
Sbjct: 172 -RRIKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQWKCTTFELVDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ-NISAQDINIANFIYESGRSLIV 298
+R++ + + +EK + L++ E++VVI + D + QD + N I E G+ +I+
Sbjct: 231 LRKKQRVTDGLEKICNSRALRTSAESDVVIFMCDISNFTLERQDFLLMNRILEQGKPMIL 290
Query: 299 CVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFN--FISAIKLNNINSFMESINHVYDSSI 356
NK D+ L + FIS + + + ++ ++D S
Sbjct: 291 VGNKKDAVDAIELENIKDFISLQAQKLIASQIPIFFISCLHEGDFSYILDECRRLHDDSK 350
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++ST R+ L ++ HP KL+Y + N + V+ NR + + Y
Sbjct: 351 RNISTHRLNMWLQEIVRRHPHPMVNSKAVKLKYIKKL-LNKFVFVLSANRPELVAESYLN 409
Query: 417 YL 418
Y+
Sbjct: 410 YV 411
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI-KSLFEYNNKKYILIDTAGIRR 242
+V+IVGK NVGKSTL N + E R IT D G TRD + + + + K +L+DTAG
Sbjct: 6 RVSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNP 65
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES-GRSLIVCV- 300
++ E +E+ T +I E+++V+ ++D I ++D+ AN++ + G S IV V
Sbjct: 66 QHP--ETVER-----TEYAIKESDMVLFVID--NKIDSEDMLFANWLRRNAGNSKIVLVC 116
Query: 301 NKWD 304
NK D
Sbjct: 117 NKSD 120
>TIGR_CMR|CJE_1036 [details] [associations]
symbol:CJE_1036 "tRNA modification GTPase TrmE"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:YP_179032.1 ProteinModelPortal:Q5HUK3
STRING:Q5HUK3 GeneID:3231546 KEGG:cjr:CJE1036 PATRIC:20043873
BioCyc:CJEJ195099:GJC0-1063-MONOMER Uniprot:Q5HUK3
Length = 442
Score = 218 (81.8 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 49/125 (39%), Positives = 75/125 (60%)
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IE K+AIVGKPNVGKS+L+N+LL R I D GTTRD+I+ F+ +IDTAG
Sbjct: 212 IEGFKIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAG 271
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR +VIE+ V + KS+ +A++++ + DA + +D I + + + + +
Sbjct: 272 IRESK---DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWI 328
Query: 300 VNKWD 304
+NK D
Sbjct: 329 LNKSD 333
>TIGR_CMR|GSU_3465 [details] [associations]
symbol:GSU_3465 "tRNA modification GTPase TrmE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:NP_954505.1 ProteinModelPortal:Q746Q3
GeneID:2686588 KEGG:gsu:GSU3465 PATRIC:22029787
BioCyc:GSUL243231:GH27-3432-MONOMER Uniprot:Q746Q3
Length = 456
Score = 217 (81.4 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 52/124 (41%), Positives = 75/124 (60%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E + V I GKPNVGKS+L+N+LL E R I PGTTRD I+ + +IDTAGI
Sbjct: 219 EGVAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGI 278
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R T +++EK V TL+ I EA++V+L++D + + D I + + +G+ LI+
Sbjct: 279 R---DTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSAL--AGKRLILVE 333
Query: 301 NKWD 304
NK D
Sbjct: 334 NKCD 337
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 47/157 (29%), Positives = 73/157 (46%)
Query: 4 VLVLV-GRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
V VL+ G+PNVGKS+L N L + A+V + PG TRD I +IDT G
Sbjct: 221 VAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIR- 279
Query: 63 EVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXX 122
+ + + E + T + +DG + L E D++I + L +G+ ++LV
Sbjct: 280 DTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSAL--AGKRLILVENKCD 337
Query: 123 XXXXXXXLDFYELGIGNPHI-ISALYGNGIKNFLENI 158
D EL + P + +S G+GI E+I
Sbjct: 338 LPRAVQIPD--ELVL-MPRVTVSTSRGDGIDELKESI 371
>TIGR_CMR|CHY_0006 [details] [associations]
symbol:CHY_0006 "tRNA modification GTPase TrmE"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
OMA:PGEFSEQ HOGENOM:HOG000200713 RefSeq:YP_358878.1
ProteinModelPortal:Q3AG56 STRING:Q3AG56 GeneID:3727714
KEGG:chy:CHY_0006 PATRIC:21273213 BioCyc:CHYD246194:GJCN-6-MONOMER
Uniprot:Q3AG56
Length = 461
Score = 209 (78.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 54/152 (35%), Positives = 79/152 (51%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E I I GKPNVGKS+L+N+LL + R I D PGTTRD I+ ++DTAGI
Sbjct: 221 EGITAVIAGKPNVGKSSLLNALLRKKRAIVTDIPGTTRDVIEDYLNLKGIPVKIVDTAGI 280
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R +T +++EK V KT + + +A+V + ++D I D I + I + +SL+V +
Sbjct: 281 R---ETEDLVEKLGVEKTREYLNQADVTLFVVDVSIGIDEDDEKILSLINKD-KSLLV-I 335
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNF 332
NK D F+ F+ NF
Sbjct: 336 NKIDLLQGKVNFEQYAVKTGIKNFVPFSARNF 367
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 6 VLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFI--IIDTGGFEPE 63
V+ G+PNVGKS+L N L + A+V + PG TRD E Y+ K I+DT G E
Sbjct: 226 VIAGKPNVGKSSLLNALLRKKRAIVTDIPGTTRD--VIEDYLNLKGIPVKIVDTAGIR-E 282
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
+ + ++T++ VD G+ E D+ I + + K +V+
Sbjct: 283 TEDLVEKLGVEKTREYLNQADVTLFVVDVSIGIDEDDEKILSLINKDKSLLVI 335
>UNIPROTKB|Q74AX3 [details] [associations]
symbol:era "GTPase Era" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 47/120 (39%), Positives = 69/120 (57%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+I+G+PNVGKSTL+N +LGE VIT D P TTR+ I+ + + + IDT GI
Sbjct: 12 VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIHHAR 71
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ KF V + L SI E ++V+LL++A + Q+ IA + + + VNK D
Sbjct: 72 SR---LNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPVFLVVNKID 128
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
++GRPNVGKSTL NR+ + + ++ P TR+R G + + IDT G +
Sbjct: 14 IIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIH-HARS 72
Query: 67 GIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
+ M ++ + V+ + +Q++ I L P+ LV
Sbjct: 73 RLNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPVFLV 123
>TIGR_CMR|GSU_2226 [details] [associations]
symbol:GSU_2226 "GTP-binding protein Era" species:243231
"Geobacter sulfurreducens PCA" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 47/120 (39%), Positives = 69/120 (57%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+I+G+PNVGKSTL+N +LGE VIT D P TTR+ I+ + + + IDT GI
Sbjct: 12 VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIHHAR 71
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ KF V + L SI E ++V+LL++A + Q+ IA + + + VNK D
Sbjct: 72 SR---LNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPVFLVVNKID 128
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
++GRPNVGKSTL NR+ + + ++ P TR+R G + + IDT G +
Sbjct: 14 IIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIH-HARS 72
Query: 67 GIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
+ M ++ + V+ + +Q++ I L P+ LV
Sbjct: 73 RLNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPVFLV 123
>TIGR_CMR|BA_5734 [details] [associations]
symbol:BA_5734 "tRNA modification GTPase TrmE"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291
RefSeq:NP_847879.1 RefSeq:YP_031574.1 RefSeq:YP_052661.1
ProteinModelPortal:Q81JD9 DNASU:1085503
EnsemblBacteria:EBBACT00000010687 EnsemblBacteria:EBBACT00000014942
EnsemblBacteria:EBBACT00000021840 GeneID:1085503 GeneID:2820766
GeneID:2848296 KEGG:ban:BA_5734 KEGG:bar:GBAA_5734 KEGG:bat:BAS5337
HOGENOM:HOG000200713 OMA:IDFPEEV
BioCyc:BANT260799:GJAJ-5414-MONOMER
BioCyc:BANT261594:GJ7F-5590-MONOMER Uniprot:Q81JD9
Length = 458
Score = 202 (76.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 46/124 (37%), Positives = 76/124 (61%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E I AI+G+PNVGKS+L+NSL+ E + I D GTTRD I+ LIDTAGI
Sbjct: 219 EGIATAIIGRPNVGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGI 278
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R +T +V+E+ V ++ + + +A++V+++++ + ++ +D + + G+ IV V
Sbjct: 279 R---ETEDVVERIGVERSKEMMSQADLVLVVVNYSETLTNEDEELFRAV--QGKDFIVIV 333
Query: 301 NKWD 304
NK D
Sbjct: 334 NKTD 337
>SGD|S000004625 [details] [associations]
symbol:MSS1 "Mitochondrial protein" species:4932
"Saccharomyces cerevisiae" [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0070899
"mitochondrial tRNA wobble uridine modification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
SGD:S000004625 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005743 GO:GO:0003924 EMBL:BK006946 EMBL:Z49211
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH GeneTree:ENSGT00390000016851 OrthoDB:EOG4B2X62
EMBL:X69481 EMBL:DQ834923 PIR:S54025 RefSeq:NP_013736.1
ProteinModelPortal:P32559 SMR:P32559 DIP:DIP-5882N IntAct:P32559
MINT:MINT-2788166 STRING:P32559 PaxDb:P32559 EnsemblFungi:YMR023C
GeneID:855037 KEGG:sce:YMR023C CYGD:YMR023c NextBio:978251
Genevestigator:P32559 GermOnline:YMR023C GO:GO:0070899
Uniprot:P32559
Length = 526
Score = 201 (75.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 52/156 (33%), Positives = 88/156 (56%)
Query: 153 NFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
N +NI+ + F +K E + I IK+ ++G PNVGKS+L+NSL ++ I D
Sbjct: 246 NVEKNIICLRDQIVTFMQKVEKSTILQ-NGIKLVLLGAPNVGKSSLVNSLTNDDISIVSD 304
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI ++ N K I+ DTAGIR K+ + IE + + K +++++ + ++
Sbjct: 305 IPGTTRDSIDAMINVNGYKVIICDTAGIRE--KSSDKIEMLGIDRAKKKSVQSDLCLFIV 362
Query: 273 DAQQ--NISAQDINIANFIYES--GRSLIVCVNKWD 304
D + +DI +A+ ++ + +I+ VNK D
Sbjct: 363 DPTDLSKLLPEDI-LAHLSSKTFGNKRIIIVVNKSD 397
>TIGR_CMR|CHY_0430 [details] [associations]
symbol:CHY_0430 "GTP-binding protein Era" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
OMA:ITREQLF SUPFAM:SSF54814 eggNOG:COG1159 HOGENOM:HOG000245596
KO:K03595 TIGRFAMs:TIGR00436 RefSeq:YP_359291.1
ProteinModelPortal:Q3AEZ3 STRING:Q3AEZ3 GeneID:3728261
KEGG:chy:CHY_0430 PATRIC:21274021
BioCyc:CHYD246194:GJCN-431-MONOMER Uniprot:Q3AEZ3
Length = 298
Score = 183 (69.5 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 51/165 (30%), Positives = 83/165 (50%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR-R 243
V+IVG+PNVGKSTL+N ++G I D P TTR+ I+++ + I IDT G+++ R
Sbjct: 8 VSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPGVQKPR 67
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
NK E F + + L S+ E +V++ +++A I Q+ + + E +I+ VNK
Sbjct: 68 NKLGE----FMLKQALTSLDEVDVLLYVVEANSPIGPQENYLLKTLAEVKTPIILVVNKI 123
Query: 304 DSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESI 348
D L A +ISA+ ++ +E I
Sbjct: 124 DVVKMIEAQTLARQIESR---LKVAKTYYISALNGTGVSELVEGI 165
Score = 134 (52.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE-PEVK 65
+VGRPNVGKSTL N++ ++ A++++ P TR++ K I IDT G + P K
Sbjct: 10 IVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPGVQKPRNK 69
Query: 66 KGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXXXX 125
G M KQ + V+ + Q+ + L + PI+LV
Sbjct: 70 LGEF--MLKQALTSLDEVDVLLYVVEANSPIGPQENYLLKTLAEVKTPIILVVNKIDVVK 127
Query: 126 XXXXLDFYE-----LGIGNPHIISALYGNGIKNFLENILTIELP 164
L + + ISAL G G+ +E I + LP
Sbjct: 128 MIEAQTLARQIESRLKVAKTYYISALNGTGVSELVEGIFEL-LP 170
>TIGR_CMR|NSE_0717 [details] [associations]
symbol:NSE_0717 "tRNA modification GTPase TrmE"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 SMART:SM00382
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872
GO:GO:0003924 GO:GO:0006400 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:YP_506593.1 ProteinModelPortal:Q2GD53 STRING:Q2GD53
GeneID:3931628 KEGG:nse:NSE_0717 PATRIC:22681449 OMA:IEAHIIT
ProtClustDB:CLSK2528116 BioCyc:NSEN222891:GHFU-729-MONOMER
Uniprot:Q2GD53
Length = 550
Score = 190 (71.9 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 47/115 (40%), Positives = 65/115 (56%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E V IVGKPNVGKSTL N L + I D PGTTRD ++ + + IL DTAGI
Sbjct: 211 EGFSVVIVGKPNVGKSTLFNYLAKRDLAIVTDIPGTTRDILEVRLDCHGYPVILSDTAGI 270
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ----NISAQDINIANFIYE 291
+ +T + IEK + + LK EA+V++ L D + N+ +D+ AN + E
Sbjct: 271 Q---ETCDAIEKMGITRALKKATEADVIVFLRDITELHLTNVRREDV--ANSVIE 320
>TIGR_CMR|CPS_4121 [details] [associations]
symbol:CPS_4121 "GTP-binding protein Era" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_270776.1
ProteinModelPortal:Q47WP6 SMR:Q47WP6 STRING:Q47WP6 GeneID:3521211
KEGG:cps:CPS_4121 PATRIC:21471105
BioCyc:CPSY167879:GI48-4134-MONOMER Uniprot:Q47WP6
Length = 305
Score = 178 (67.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+AIVG+PNVGKSTL+N+LLG+ IT P TTR I + N++ +L+DT G+
Sbjct: 13 IAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPGLHTEE 72
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
K I + SI E +++ L++ + + D + + + +SG I+ VNK D
Sbjct: 73 K--RAINRLMNRAASSSIAEVELIMFLVEGT-HWTKDDELVLSKVKQSGTPCILVVNKTD 129
Query: 305 S 305
+
Sbjct: 130 N 130
Score = 152 (58.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 59/246 (23%), Positives = 103/246 (41%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ +VGRPNVGKSTL N L + ++ + P TR R G + +++DT G E
Sbjct: 12 LIAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPGLHTE 71
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXX 123
K+ I M + + V+G + D+L+ + +++SG P +LV
Sbjct: 72 EKRAINRLMNRAASSSIAEVELIMFLVEGTHW-TKDDELVLSKVKQSGTPCILVVNKTDN 130
Query: 124 XXXXXXLDFYELGIGNPHI------ISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
L + +G H I A G+G+ + LT LP F+ ++
Sbjct: 131 IPDKDELLPHLQKLGAMHDFRDIVPICATKGHGVDTIRQLCLT-SLPEGVFWFPEDHITD 189
Query: 178 HSIEYIKVAIVGKPNVGKS--TLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
S ++ I+ + + + L S+ E D G + L E +++K ++I
Sbjct: 190 RSSRFMASEIIREKLIRFTGDELPYSITVEIEQFKMDDKGIIHINALILVERDSQKRMVI 249
Query: 236 DTAGIR 241
G R
Sbjct: 250 GNKGER 255
Score = 39 (18.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 404 GNRLKYIGNDYKRYLE 419
G RLK IG + +R +E
Sbjct: 253 GERLKTIGQEARRDME 268
>TIGR_CMR|CBU_1922 [details] [associations]
symbol:CBU_1922 "tRNA modification GTPase TrmE"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0003924
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ ProtClustDB:PRK05291 EMBL:Y10436 RefSeq:NP_820899.1
ProteinModelPortal:P94612 GeneID:1209835 KEGG:cbu:CBU_1922
PATRIC:17932577 BioCyc:CBUR227377:GJ7S-1896-MONOMER Uniprot:P94612
Length = 452
Score = 185 (70.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 57/176 (32%), Positives = 88/176 (50%)
Query: 132 FYELGIGNPHI-ISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGK 190
+ E I P I L IK LEN+ +K K+ E I V I G+
Sbjct: 169 YIEASIDFPEEEIDFLADERIKETLENLTHQVQEIEKTAKQGALLR----EGITVVIAGE 224
Query: 191 PNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVI 250
PNVGKS+L+N L G+ I D GTTRD I+ + ++DTAG+R T +V+
Sbjct: 225 PNVGKSSLLNLLSGQETAIVTDIAGTTRDIIRESIHIDGLPIHVVDTAGLRL---TEDVV 281
Query: 251 EKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL--IVCVNKWD 304
EK V +T K++ +A++++L++DA + IA + E+ + ++ NK D
Sbjct: 282 EKEGVRRTQKAVQQADLLLLMIDASKPTEDFKKIIAQWFSENDNKIPTLIVENKID 337
Score = 40 (19.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 358 HLSTSRITRALISAIKNH 375
H+ S TRA + +KNH
Sbjct: 352 HIKLSVKTRAGVELLKNH 369
>TIGR_CMR|BA_4524 [details] [associations]
symbol:BA_4524 "GTP-binding protein Era" species:198094
"Bacillus anthracis str. Ames" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20
InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814 HOGENOM:HOG000245596
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
RefSeq:NP_846747.1 RefSeq:YP_021170.1 RefSeq:YP_030447.1
ProteinModelPortal:Q81LT7 DNASU:1088253
EnsemblBacteria:EBBACT00000009432 EnsemblBacteria:EBBACT00000018443
EnsemblBacteria:EBBACT00000022023 GeneID:1088253 GeneID:2819016
GeneID:2848213 KEGG:ban:BA_4524 KEGG:bar:GBAA_4524 KEGG:bat:BAS4199
BioCyc:BANT260799:GJAJ-4255-MONOMER
BioCyc:BANT261594:GJ7F-4400-MONOMER Uniprot:Q81LT7
Length = 301
Score = 171 (65.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 39/121 (32%), Positives = 72/121 (59%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR-R 243
V+I+G+PNVGKST +N ++G+ I D P TTR+ I+ ++ N+ + I IDT GI + +
Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK 70
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
+K + + K + TLK E ++V+ +++A + + I + E+ + + + +NK
Sbjct: 71 HKLGDFMVKMAQT-TLK---EVDIVLFMVNAVEGFGRGEEFIIEKLKETKQPVFLVINKI 126
Query: 304 D 304
D
Sbjct: 127 D 127
Score = 129 (50.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF-EPEVK 65
++GRPNVGKST NR+ + A++++ P TR++ G I IDT G +P+ K
Sbjct: 13 IIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPKHK 72
Query: 66 KGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
G M K + V+ +G ++ I L+++ QP+ LV
Sbjct: 73 LGDF--MVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQPVFLV 122
Score = 43 (20.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 375 HPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
HP +LI + R H + PI + GN + + K+YL
Sbjct: 130 HPEQLLELI-DQYRKLHDFAEIVPISALDGNNAEALIGTIKKYL 172
>UNIPROTKB|P75104 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:272634
"Mycoplasma pneumoniae M129" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264
GO:GO:0046872 GO:GO:0003924 GO:GO:0006400 EMBL:U00089
GenomeReviews:U00089_GR eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 OMA:IDFPEEV PIR:S73472 RefSeq:NP_109696.1
ProteinModelPortal:P75104 IntAct:P75104 GeneID:877349
KEGG:mpn:MPN008 PATRIC:20021289 BioCyc:MPNE272634:GJ6Z-8-MONOMER
Uniprot:P75104
Length = 442
Score = 180 (68.4 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 40/93 (43%), Positives = 59/93 (63%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
K+AI+G NVGKS+L+N+LL +++ I G+TRD ++ F N ++DTAGIR+
Sbjct: 219 KIAIIGNTNVGKSSLLNALLDQDKAIVSAIKGSTRDIVEGDFALNGHFVKILDTAGIRQH 278
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
+EK + KT +I AN+VI LLDA+Q
Sbjct: 279 QSA---LEKAGIQKTFGAIKTANLVIYLLDARQ 308
>TAIR|locus:2029406 [details] [associations]
symbol:AT1G78010 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006897 "endocytosis" evidence=RCA]
HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0007264 GO:GO:0003924 GO:GO:0005622
GO:GO:0006400 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HOGENOM:HOG000200713 OMA:IDFPEEV EMBL:BT015351 EMBL:BT015722
IPI:IPI00546429 RefSeq:NP_177924.3 UniGene:At.21626
ProteinModelPortal:Q66GQ1 SMR:Q66GQ1 STRING:Q66GQ1 PaxDb:Q66GQ1
PRIDE:Q66GQ1 EnsemblPlants:AT1G78010.1 GeneID:844136
KEGG:ath:AT1G78010 TAIR:At1g78010 InParanoid:Q66GQ1
PhylomeDB:Q66GQ1 ProtClustDB:CLSN2680810 Genevestigator:Q66GQ1
Uniprot:Q66GQ1
Length = 560
Score = 181 (68.8 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 41/122 (33%), Positives = 72/122 (59%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+++AIVG+PNVGKS+L+N+ R I + GTTRD +++ L+DTAGIR
Sbjct: 318 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLLDTAGIRE 377
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
N +++EK V ++ + A+V+I+ + A + + +D + I +S + +I+ +NK
Sbjct: 378 TN---DIVEKIGVERSETAAKVADVIIMAVSAVEGWTEEDTELLRKI-QSDKPMILVMNK 433
Query: 303 WD 304
D
Sbjct: 434 ID 435
Score = 117 (46.2 bits), Expect = 0.00078, P = 0.00078
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKS+L N + S A+V G TRD + ++DT G E
Sbjct: 320 IAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLLDTAGIR-ET 378
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK--SGQPIVLV 117
+ ++++ A V +G E+D T LRK S +P++LV
Sbjct: 379 NDIVEKIGVERSETAAKVADVIIMAVSAVEGWTEED---TELLRKIQSDKPMILV 430
>TIGR_CMR|CPS_5049 [details] [associations]
symbol:CPS_5049 "tRNA modification GTPase TrmE"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HSSP:Q9WYA4 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_271687.1
ProteinModelPortal:Q47U36 SMR:Q47U36 STRING:Q47U36 GeneID:3518638
KEGG:cps:CPS_5049 PATRIC:21472877
BioCyc:CPSY167879:GI48-5049-MONOMER Uniprot:Q47U36
Length = 471
Score = 170 (64.9 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 40/113 (35%), Positives = 66/113 (58%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E ++V I G+PN GKS+L+N+L G+ I D GTTRD + + +IDTAG+
Sbjct: 222 EGMRVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGL 281
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN--ISAQDINIANFIYE 291
R + +V+EK + + + I +A+ V+L++DA ++ I D +I +F E
Sbjct: 282 RDSD---DVVEKIGIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPE 331
>WB|WBGene00009557 [details] [associations]
symbol:F39B2.7 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] [GO:0015093 "ferrous iron transmembrane
transporter activity" evidence=IEA] [GO:0015684 "ferrous iron
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0005622 GO:GO:0006400
HSSP:P25522 eggNOG:COG0486 HOGENOM:HOG000200714 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:Z92834 PIR:T21994
RefSeq:NP_493573.1 ProteinModelPortal:Q9XTZ1 SMR:Q9XTZ1
IntAct:Q9XTZ1 STRING:Q9XTZ1 PaxDb:Q9XTZ1 EnsemblMetazoa:F39B2.7.1
EnsemblMetazoa:F39B2.7.2 GeneID:3564835 KEGG:cel:CELE_F39B2.7
UCSC:F39B2.7 CTD:3564835 WormBase:F39B2.7 InParanoid:Q9XTZ1
NextBio:954161 Uniprot:Q9XTZ1
Length = 439
Score = 169 (64.5 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 43/127 (33%), Positives = 75/127 (59%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ + + G+PN GKS+++N L ++ I PGTTRDS++++ + N + L DTAG+R+
Sbjct: 211 LDIVLYGRPNSGKSSILNQLAHDDVAIVSSIPGTTRDSLETIIQINGVRCRLTDTAGVRQ 270
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDI-NIANFIYESGRS----LI 297
KT +VIE + + K I A+++ +++D Q S D+ +I N + E R+ +I
Sbjct: 271 --KTNDVIEAEGIRRAQKRIQSADIICVVVDPQFT-SDDDVESILNDV-EVMRNREARVI 326
Query: 298 VCVNKWD 304
+ NK D
Sbjct: 327 IAKNKSD 333
>UNIPROTKB|Q9KPB3 [details] [associations]
symbol:era "GTPase Era" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0042254
GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ PIR:A82073 RefSeq:NP_232089.1 ProteinModelPortal:Q9KPB3
SMR:Q9KPB3 DNASU:2613002 GeneID:2613002 KEGG:vch:VC2460
PATRIC:20083941 Uniprot:Q9KPB3
Length = 325
Score = 164 (62.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VAIVG+PNVGKSTL+N+LLG+ IT P TTR I + N + I +DT G+
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
K I + S+ + N+V+ +++ + +A D + + ++ +++CVNK D
Sbjct: 94 K--RAINRLMNRAASSSLSDVNLVLFVVEGT-HWTADDEMVFTKLQKANFPVVLCVNKVD 150
Score = 141 (54.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 35/112 (31%), Positives = 52/112 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + ++ + P TR R G G I +DT G E
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
K+ I M + + V+G + + + T L+K+ P+VL
Sbjct: 94 KRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTK-LQKANFPVVL 144
>TIGR_CMR|VC_2460 [details] [associations]
symbol:VC_2460 "GTP-binding protein Era" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ PIR:A82073 RefSeq:NP_232089.1 ProteinModelPortal:Q9KPB3
SMR:Q9KPB3 DNASU:2613002 GeneID:2613002 KEGG:vch:VC2460
PATRIC:20083941 Uniprot:Q9KPB3
Length = 325
Score = 164 (62.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VAIVG+PNVGKSTL+N+LLG+ IT P TTR I + N + I +DT G+
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
K I + S+ + N+V+ +++ + +A D + + ++ +++CVNK D
Sbjct: 94 K--RAINRLMNRAASSSLSDVNLVLFVVEGT-HWTADDEMVFTKLQKANFPVVLCVNKVD 150
Score = 141 (54.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 35/112 (31%), Positives = 52/112 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + ++ + P TR R G G I +DT G E
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
K+ I M + + V+G + + + T L+K+ P+VL
Sbjct: 94 KRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTK-LQKANFPVVL 144
>CGD|CAL0004408 [details] [associations]
symbol:orf19.2042 species:5476 "Candida albicans" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:1900524 "positive
regulation of flocculation via cell wall protein-carbohydrate
interaction by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070899 "mitochondrial
tRNA wobble uridine modification" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 CGD:CAL0004408 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0005622 GO:GO:0006400 EMBL:AACQ01000031
EMBL:AACQ01000030 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:XP_719491.1 RefSeq:XP_719616.1 ProteinModelPortal:Q5AD25
STRING:Q5AD25 GeneID:3638773 GeneID:3638809 KEGG:cal:CaO19.2042
KEGG:cal:CaO19.9590 Uniprot:Q5AD25
Length = 529
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 43/157 (27%), Positives = 85/157 (54%)
Query: 151 IKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVIT 210
I++ ENI IE K + K + + I + I++A++G PN GKS+++N L ++ I
Sbjct: 249 IRDVKENIAKIESEIKAYLSKVKSSQI-LLNGIQLALLGPPNAGKSSILNILANKDAAIV 307
Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
+ GTTRD + E K ++ DTAGIR + + IE+ + + + + A+ VI+
Sbjct: 308 SEIAGTTRDILDIPLEIGGYKVVVGDTAGIRSFEEA-DSIEQEGIKRAKQRSMLADFVIV 366
Query: 271 LLDAQQNISAQDINIANFI---YESGRSLIVCVNKWD 304
+LD ++ + + + + ++ + +++ +NK D
Sbjct: 367 VLDPM-SVEKEPLELKEHLKTLVKANKQMLIVLNKQD 402
>TIGR_CMR|APH_0350 [details] [associations]
symbol:APH_0350 "GTP-binding protein Era" species:212042
"Anaplasma phagocytophilum HZ" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0042274
GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 HOGENOM:HOG000245597 RefSeq:YP_504957.1
ProteinModelPortal:Q2GKZ4 STRING:Q2GKZ4 GeneID:3930686
KEGG:aph:APH_0350 PATRIC:20949290
BioCyc:APHA212042:GHPM-379-MONOMER Uniprot:Q2GKZ4
Length = 305
Score = 160 (61.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 47/140 (33%), Positives = 69/140 (49%)
Query: 165 YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ F ++ E N ++ VA+VG N GKSTLIN L+G I + TTR + S+
Sbjct: 2 FSNFGERVEIENTGLMKCSLVAVVGMTNAGKSTLINKLVGFKASIVTNKVHTTRVKMNSV 61
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
N + + DT GI KT +EKF V S+ A++VIL+LDA++ I
Sbjct: 62 LNEGNVQLVFTDTPGIFSP-KT--KLEKFIVKNAWMSMKGADMVILVLDAKRRICVHVEK 118
Query: 285 IANFIYESGRSLIVCVNKWD 304
I + + I +NK D
Sbjct: 119 IIKRLQRDNVASIAVINKMD 138
>DICTYBASE|DDB_G0288609 [details] [associations]
symbol:eral1 "GTP-binding protein era homolog"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0288609 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 EMBL:AAFI02000118 RefSeq:XP_636640.1
ProteinModelPortal:Q54IP6 STRING:Q54IP6 EnsemblProtists:DDB0219361
GeneID:8626714 KEGG:ddi:DDB_G0288609 InParanoid:Q54IP6 OMA:DAVKRPT
Uniprot:Q54IP6
Length = 398
Score = 160 (61.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 175 TNIHS--IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKY 232
T IH+ + + VAI+G PN GKSTL+NS++GE T TTRD++ ++ ++ +
Sbjct: 105 TPIHNENAKTLNVAIIGAPNAGKSTLVNSIVGEKICAVSPTEHTTRDAVLGIYSKDDTQI 164
Query: 233 ILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES 292
+ DT GI + + +F V + EA++V+L++DA N S+ I + E
Sbjct: 165 LFHDTPGIIKNFNRMAHVREF-VNLAWGVVKEADIVLLVVDATNNNSSDTEFIVGKLEEQ 223
Query: 293 GRSLI 297
+LI
Sbjct: 224 MLNLI 228
>UNIPROTKB|Q8EH80 [details] [associations]
symbol:era "GTPase Era" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
HSSP:Q9X1F8 SUPFAM:SSF54814 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ HOGENOM:HOG000245597
RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80 GeneID:1169170
KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 51/193 (26%), Positives = 81/193 (41%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ ++GRPNVGKSTL NRL + ++ + P TR R G G + + IDT G E
Sbjct: 47 MVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGLHIE 106
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQP--IVLVXXXX 121
++ I M + + VDG + D+++ + LR+ G+ VL
Sbjct: 107 EQRAINRLMNRAAASSLADVSMVIFVVDGMTWTAD-DEMVLSKLRRGGEERKTVLAINKV 165
Query: 122 XXXXXXXXLDFYELGIGNPHI------ISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
L Y + + ISA G +K LE + LP FF +++
Sbjct: 166 DNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILE-LAAQSLPENPFFFPEDYV 224
Query: 176 NIHSIEYIKVAIV 188
S ++ IV
Sbjct: 225 TDRSQRFMASEIV 237
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 176 NIH-SIEYI-KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
++H + Y VAI+G+PNVGKSTL+N LLG+ IT P TTR I + ++ +
Sbjct: 37 SVHYDVTYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIV 96
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
IDT G+ + I + S+ + ++VI ++D +A D + + + G
Sbjct: 97 FIDTPGLHIEEQ--RAINRLMNRAAASSLADVSMVIFVVDGM-TWTADDEMVLSKLRRGG 153
Query: 294 --RSLIVCVNKWDS 305
R ++ +NK D+
Sbjct: 154 EERKTVLAINKVDN 167
>TIGR_CMR|SO_1349 [details] [associations]
symbol:SO_1349 "GTP-binding protein Era" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80
GeneID:1169170 KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 51/193 (26%), Positives = 81/193 (41%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ ++GRPNVGKSTL NRL + ++ + P TR R G G + + IDT G E
Sbjct: 47 MVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGLHIE 106
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQP--IVLVXXXX 121
++ I M + + VDG + D+++ + LR+ G+ VL
Sbjct: 107 EQRAINRLMNRAAASSLADVSMVIFVVDGMTWTAD-DEMVLSKLRRGGEERKTVLAINKV 165
Query: 122 XXXXXXXXLDFYELGIGNPHI------ISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
L Y + + ISA G +K LE + LP FF +++
Sbjct: 166 DNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILE-LAAQSLPENPFFFPEDYV 224
Query: 176 NIHSIEYIKVAIV 188
S ++ IV
Sbjct: 225 TDRSQRFMASEIV 237
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 176 NIH-SIEYI-KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
++H + Y VAI+G+PNVGKSTL+N LLG+ IT P TTR I + ++ +
Sbjct: 37 SVHYDVTYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIV 96
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
IDT G+ + I + S+ + ++VI ++D +A D + + + G
Sbjct: 97 FIDTPGLHIEEQ--RAINRLMNRAAASSLADVSMVIFVVDGM-TWTADDEMVLSKLRRGG 153
Query: 294 --RSLIVCVNKWDS 305
R ++ +NK D+
Sbjct: 154 EERKTVLAINKVDN 167
>UNIPROTKB|P37214 [details] [associations]
symbol:era "GTPase Era" species:210007 "Streptococcus
mutans UA159" [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0042254 GO:GO:0019843 GO:GO:0019003
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:L03428 EMBL:AE014133 RefSeq:NP_721952.1
ProteinModelPortal:P37214 EnsemblBacteria:EBSTRT00000013881
GeneID:1028847 GenomeReviews:AE014133_GR KEGG:smu:SMU_1617
PATRIC:19665223 SABIO-RK:P37214 Uniprot:P37214
Length = 299
Score = 154 (59.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/182 (25%), Positives = 85/182 (46%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VAI+G+PNVGKST +N ++G+ I D TTR+ I ++ + ++ + IDT GI +
Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKP- 66
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
KT + F V ++ E + V+ ++ A + D I + + +I+ +NK D
Sbjct: 67 KT--ALGDFMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERLKAAKVPVILVINKID 124
Query: 305 SXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMES-INHVYDSSIIHLSTSR 363
F ISA++ NN++ ++ ++H+ + + +
Sbjct: 125 KVHPNQLLEQIDDFRNQMDFQEIVP---ISALQGNNVSHLVDLLVDHL-EEGFQYFPADQ 180
Query: 364 IT 365
IT
Sbjct: 181 IT 182
Score = 112 (44.5 bits), Expect = 0.0010, P = 0.0010
Identities = 44/180 (24%), Positives = 82/180 (45%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF-EPE 63
+ ++GRPNVGKST N + + A++++ TR++ G K+ + IDT G +P+
Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPK 67
Query: 64 VKKG-IMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXX 122
G M E T + D ++G + D +I L+ + P++LV
Sbjct: 68 TALGDFMVESAYSTLREVDTVLFMVPA-DEKRG--KGDNMIIERLKAAKVPVILVINKID 124
Query: 123 XXXXXXXL----DFY-ELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTN 176
L DF ++ ISAL GN + + ++ ++ +E ++ +F + T+
Sbjct: 125 KVHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQ-YFPADQITD 183
>UNIPROTKB|Q9KVY5 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 36/105 (34%), Positives = 59/105 (56%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KV I G+PN GKS+L+N+L G+ I D GTTRD ++ + +IDTAG+
Sbjct: 214 EGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL 273
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ--QNISAQDI 283
R + + +EK + + + I +A+ V+ ++D + QDI
Sbjct: 274 RDAS---DAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDI 315
>TIGR_CMR|VC_0003 [details] [associations]
symbol:VC_0003 "thiophene and furan oxidation protein ThdF"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 36/105 (34%), Positives = 59/105 (56%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KV I G+PN GKS+L+N+L G+ I D GTTRD ++ + +IDTAG+
Sbjct: 214 EGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL 273
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ--QNISAQDI 283
R + + +EK + + + I +A+ V+ ++D + QDI
Sbjct: 274 RDAS---DAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDI 315
>UNIPROTKB|Q5SM23 [details] [associations]
symbol:era "GTPase Era" species:300852 "Thermus
thermophilus HB8" [GO:0000028 "ribosomal small subunit assembly"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0000028 EMBL:AP008226 GenomeReviews:AP008226_GR GO:GO:0070181
GO:GO:0043024 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_143386.1 PDB:1WF3
PDB:1X18 PDB:1X1L PDBsum:1WF3 PDBsum:1X18 PDBsum:1X1L
ProteinModelPortal:Q5SM23 SMR:Q5SM23 STRING:Q5SM23 GeneID:3167951
KEGG:ttj:TTHA0120 PATRIC:23955177 EvolutionaryTrace:Q5SM23
Uniprot:Q5SM23
Length = 301
Score = 151 (58.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 38/123 (30%), Positives = 68/123 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VAIVGKPNVGKSTL+N+LLG P TTR ++ + ++ + +DT G+ +
Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGL---H 66
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES-GRSLIVCV-NK 302
K + + +F + +++ + N V+ ++D + + +D +A + G+ I+ V NK
Sbjct: 67 KPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNK 126
Query: 303 WDS 305
D+
Sbjct: 127 LDA 129
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VG+PNVGKSTL N L + A ++ P TR R G G++ + +DT G +
Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 69
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKS-GQ-PIVLVXXXXX 122
+ M ++ +A VD R +D+L+ L+ G+ PI+LV
Sbjct: 70 D-ALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLD 128
Query: 123 XXXX--XXXLDFYE-LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEF 174
++E L P ++SAL + ++L + +P FF +++
Sbjct: 129 AAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLAL-MPEGPFFYPEDY 182
>FB|FBgn0039189 [details] [associations]
symbol:CG18528 species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0046872 GO:GO:0003924
GO:GO:0005622 GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 GeneTree:ENSGT00390000016851 EMBL:AY071544
EMBL:AY071692 RefSeq:NP_651251.3 UniGene:Dm.5798 SMR:Q9VC87
IntAct:Q9VC87 MINT:MINT-821147 STRING:Q9VC87
EnsemblMetazoa:FBtr0084628 GeneID:42906 KEGG:dme:Dmel_CG18528
UCSC:CG18528-RA FlyBase:FBgn0039189 InParanoid:Q9VC87 OMA:LTQTRHR
OrthoDB:EOG4HQC0H GenomeRNAi:42906 NextBio:831200 Uniprot:Q9VC87
Length = 493
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 36/109 (33%), Positives = 65/109 (59%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++ I+G PNVGKS+L+N L + I D GTTRD I+++ + + DTAG+RR
Sbjct: 240 VRTVIIGAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDIIETMHNFGGYPVVFSDTAGLRR 299
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS--AQDINIANFI 289
T + IE+ + + ++++++++LL +A+ NI+ D +A F+
Sbjct: 300 Y--TTDSIEQEGMQRAKNCLVQSDLILLLAEAK-NIAQLTHDDAVAPFV 345
>TIGR_CMR|APH_1288 [details] [associations]
symbol:APH_1288 "tRNA modification GTPase TrmE"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ RefSeq:YP_505803.1 ProteinModelPortal:Q2GIJ8
STRING:Q2GIJ8 GeneID:3930863 KEGG:aph:APH_1288 PATRIC:20951370
ProtClustDB:PRK05291 BioCyc:APHA212042:GHPM-1290-MONOMER
Uniprot:Q2GIJ8
Length = 445
Score = 154 (59.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++V I+G PN GKSTL NS+ N I + PGTTRD ++ + YI++DTAGIR
Sbjct: 218 VRVVILGPPNAGKSTLFNSIARRNAAIVSEHPGTTRDVLEVAIDIGGYPYIVLDTAGIR- 276
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
++ + IE+ + + + EA++ I++ + S Q I+
Sbjct: 277 --ESCDGIEQEGIKRAKMAAEEADIKIVMYP-YETTSMQGID 315
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+V++G PN GKSTLFN + A+V+ +PG TRD IG +I++DT G E
Sbjct: 220 VVILGPPNAGKSTLFNSIARRNAAIVSEHPGTTRDVLEVAIDIGGYPYIVLDTAGIR-ES 278
Query: 65 KKGIMHEMTKQTKQA 79
GI E K+ K A
Sbjct: 279 CDGIEQEGIKRAKMA 293
>TIGR_CMR|SO_0003 [details] [associations]
symbol:SO_0003 "tRNA modification GTPase TrmE"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0008175 "tRNA methyltransferase
activity" evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 RefSeq:NP_715645.2 ProteinModelPortal:Q8CX52
GeneID:1167901 KEGG:son:SO_0003 PATRIC:23519697 Uniprot:Q8CX52
Length = 453
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 41/127 (32%), Positives = 66/127 (51%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KV I G+PN GKS+L+N+L G+ I + GTTRD ++ + +IDTAG+
Sbjct: 214 EGMKVVIAGRPNAGKSSLLNALAGKESAIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGL 273
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI-ANFIYESGRSLIVC 299
R T + +E+ + + I A+ V+ ++D + +I +FI +L V
Sbjct: 274 R---DTTDTVEQIGIERAWNEINSADRVLFMVDGTTTTAVDPHDIWPDFINRLPTNLGVT 330
Query: 300 V--NKWD 304
V NK D
Sbjct: 331 VIRNKAD 337
>UNIPROTKB|P25522 [details] [associations]
symbol:mnmE "GTP-binding protein with a role in
modification of tRNA" species:83333 "Escherichia coli K-12"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009268 "response to pH" evidence=IMP] [GO:0030488 "tRNA
methylation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IEA;IDA] [GO:0005525 "GTP binding" evidence=IEA;IDA]
[GO:0006805 "xenobiotic metabolic process" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0003924 GO:GO:0009268
GO:GO:0006805 EMBL:L10328 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
EMBL:S57109 PIR:A38160 PIR:C65173 RefSeq:NP_418162.1
RefSeq:YP_491728.1 PDB:1RFL PDB:2GJ8 PDB:2GJ9 PDB:2GJA PDBsum:1RFL
PDBsum:2GJ8 PDBsum:2GJ9 PDBsum:2GJA ProteinModelPortal:P25522
SMR:P25522 DIP:DIP-11033N IntAct:P25522 PRIDE:P25522
EnsemblBacteria:EBESCT00000002643 EnsemblBacteria:EBESCT00000017912
GeneID:12932528 GeneID:948222 KEGG:ecj:Y75_p3466 KEGG:eco:b3706
PATRIC:32122909 EchoBASE:EB0990 EcoGene:EG10997
BioCyc:EcoCyc:EG10997-MONOMER BioCyc:ECOL316407:JW3684-MONOMER
EvolutionaryTrace:P25522 Genevestigator:P25522 GO:GO:0030488
Uniprot:P25522
Length = 454
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KV I G+PN GKS+L+N+L G I D GTTRD ++ + +IDTAG+
Sbjct: 215 EGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL 274
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI-ANFIYESGRSLIVC 299
R + + +E+ + + + I +A+ V+ ++D + I FI L +
Sbjct: 275 REAS---DEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPIT 331
Query: 300 V--NKWD 304
V NK D
Sbjct: 332 VVRNKAD 338
>UNIPROTKB|P06616 [details] [associations]
symbol:era "GTP-binding protein" species:83333 "Escherichia
coli K-12" [GO:0005829 "cytosol" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IDA] [GO:0070181 "SSU rRNA binding"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0005525 "GTP binding" evidence=IEA;IDA] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0006468 EMBL:D64044
EMBL:U36841 GO:GO:0042274 GO:GO:0070181 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:M14658 EMBL:X02673 PIR:S44713 RefSeq:NP_417061.1
RefSeq:YP_490794.1 PDB:1EGA PDB:3IEU PDBsum:1EGA PDBsum:3IEU
ProteinModelPortal:P06616 SMR:P06616 DIP:DIP-9521N IntAct:P06616
MINT:MINT-1248282 PhosSite:P010424 PRIDE:P06616
EnsemblBacteria:EBESCT00000004013 EnsemblBacteria:EBESCT00000004014
EnsemblBacteria:EBESCT00000015240 GeneID:12934226 GeneID:947036
KEGG:ecj:Y75_p2519 KEGG:eco:b2566 PATRIC:32120531 EchoBASE:EB0266
EcoGene:EG10270 HOGENOM:HOG000245597 BioCyc:EcoCyc:EG10270-MONOMER
BioCyc:ECOL316407:JW2550-MONOMER EvolutionaryTrace:P06616
Genevestigator:P06616 Uniprot:P06616
Length = 301
Score = 144 (55.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+AIVG+PNVGKSTL+N LLG+ IT TTR I + + I +DT G+
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
K I + SI + +VI +++ + + D + N + E +I+ VNK D
Sbjct: 71 K--RAINRLMNKAASSSIGDVELVIFVVEGTR-WTPDDEMVLNKLREGKAPVILAVNKVD 127
Query: 305 S 305
+
Sbjct: 128 N 128
Score = 141 (54.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N+L + ++ + TR R G G I +DT G E
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
K+ I M K + V+G + + D+++ N LR+ P++L
Sbjct: 71 KRAINRLMNKAASSSIGDVELVIFVVEGTRWTPD-DEMVLNKLREGKAPVIL 121
>ZFIN|ZDB-GENE-060526-84 [details] [associations]
symbol:eral1 "Era G-protein-like 1 (E. coli)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=ISS] [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00449 PROSITE:PS50823 ZFIN:ZDB-GENE-060526-84
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005743
GO:GO:0005759 GO:GO:0019843 GO:GO:0000028 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 CTD:26284
GeneTree:ENSGT00390000013800 HOGENOM:HOG000245598 SUPFAM:SSF54814
eggNOG:COG1159 HOVERGEN:HBG051495 OrthoDB:EOG44XJGX EMBL:BX548073
EMBL:BC163468 EMBL:BC163480 IPI:IPI00799669 RefSeq:NP_001122219.1
UniGene:Dr.155067 ProteinModelPortal:B0S6U7 STRING:B0S6U7
Ensembl:ENSDART00000083778 GeneID:569087 KEGG:dre:569087
OMA:TTTRNIS NextBio:20889500 Bgee:B0S6U7 Uniprot:B0S6U7
Length = 447
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+KVAIVG PN GKSTL N LLG TTR + N+ + +L+DT G+
Sbjct: 111 LKVAIVGSPNAGKSTLTNQLLGRKLFAVSSKVHTTRSRAVGVLTENDTQIVLLDTPGLTT 170
Query: 243 RNKTFE-VIEKFSVIKTLKSILEANVVILLLD 273
+ K +E ++ KS+ EA++V++L+D
Sbjct: 171 QIKAKRHQLENSLLVDPFKSLKEADLVVVLVD 202
>TIGR_CMR|ECH_0476 [details] [associations]
symbol:ECH_0476 "GTP-binding protein Era" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
HOGENOM:HOG000245597 RefSeq:YP_507292.1 ProteinModelPortal:Q2GGZ1
STRING:Q2GGZ1 GeneID:3928006 KEGG:ech:ECH_0476 PATRIC:20576424
BioCyc:ECHA205920:GJNR-478-MONOMER Uniprot:Q2GGZ1
Length = 296
Score = 142 (55.0 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 45/120 (37%), Positives = 61/120 (50%)
Query: 186 AIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNK 245
AIVG N GKSTLIN L+G+ TTR + ++ N + I IDT GI K
Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSP-K 70
Query: 246 TFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDS 305
T +EKF V S+ VILLLD + ++ I + I +S + I+ VNK D+
Sbjct: 71 T--KLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRIKQSNINAILVVNKIDT 128
>TIGR_CMR|SPO_3895 [details] [associations]
symbol:SPO_3895 "tRNA modification GTPase TrmE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0003924
GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_169083.1
ProteinModelPortal:Q5LLM7 GeneID:3196284 KEGG:sil:SPO3895
PATRIC:23381297 Uniprot:Q5LLM7
Length = 428
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/90 (34%), Positives = 51/90 (56%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
+VAI+G PN GKSTL+N L G +T + GTTRD I+ + L+DTAG+R
Sbjct: 215 EVAIIGPPNAGKSTLLNMLAGREAALTSEVAGTTRDVIEVRMDLGGLPVTLLDTAGLR-- 272
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLD 273
+T +++E + + +A++ + L +
Sbjct: 273 -ETGDLVEGMGIALARRRADQADLRVFLTE 301
>UNIPROTKB|P0A562 [details] [associations]
symbol:era "GTPase Era" species:1773 "Mycobacterium
tuberculosis" [GO:0005829 "cytosol" evidence=IDA] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0042254 EMBL:BX842579 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 HOGENOM:HOG000245596 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ PIR:C70586 RefSeq:NP_336913.1
RefSeq:YP_006515798.1 RefSeq:YP_177873.1 ProteinModelPortal:P0A562
SMR:P0A562 EnsemblBacteria:EBMYCT00000003963
EnsemblBacteria:EBMYCT00000070369 GeneID:13319070 GeneID:886027
GeneID:925918 KEGG:mtc:MT2433 KEGG:mtu:Rv2364c KEGG:mtv:RVBD_2364c
PATRIC:18127100 TubercuList:Rv2364c Uniprot:P0A562
Length = 300
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/123 (32%), Positives = 63/123 (51%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V +VG+PN GKSTL N+L+G IT P TTR +I+ + ++ + IL+DT G+ R
Sbjct: 9 VCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPGLHRPR 68
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG---RSLIVCVN 301
V +T ++ +V+ L + A + I D I + +G +L+V V
Sbjct: 69 TLLGKRLNDLVRETYAAV---DVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVVIVT 125
Query: 302 KWD 304
K D
Sbjct: 126 KID 128
>GENEDB_PFALCIPARUM|PFD0530c [details] [associations]
symbol:PFD0530c "Hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR006073 Pfam:PF01926
GO:GO:0005525 EMBL:AL844503 RefSeq:XP_001351420.1
ProteinModelPortal:Q9U0I1 EnsemblProtists:PFD0530c:mRNA
GeneID:812379 KEGG:pfa:PFD0530c EuPathDB:PlasmoDB:PF3D7_0410700
HOGENOM:HOG000283971 ProtClustDB:CLSZ2433459 Uniprot:Q9U0I1
Length = 904
Score = 149 (57.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 43/106 (40%), Positives = 61/106 (57%)
Query: 149 NGIKNF--LENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGEN 206
NG K L+ ++ L Y KKK+ IH+ + +K +G PNVGKS LIN +L
Sbjct: 636 NGKKEIIVLKKLIN-RLCYHIIEKKKK-KGIHNYK-VKCIFIGLPNVGKSALINRILEIK 692
Query: 207 RVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEK 252
+ +YD PG T + I+ Y+NKKY LIDT GI +N +++ EK
Sbjct: 693 KAKSYDNPGLTTN-IQM---YSNKKYELIDTPGILAQN-LYKIKEK 733
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 334 SAIKLNNINSFMESINHVYDSSII-HLS 360
+ + + N N++M N++Y ++ H+S
Sbjct: 757 NVVSIKNYNNYMHVENNIYLLALCNHIS 784
>UNIPROTKB|Q9U0I1 [details] [associations]
symbol:PFD0530c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
EMBL:AL844503 RefSeq:XP_001351420.1 ProteinModelPortal:Q9U0I1
EnsemblProtists:PFD0530c:mRNA GeneID:812379 KEGG:pfa:PFD0530c
EuPathDB:PlasmoDB:PF3D7_0410700 HOGENOM:HOG000283971
ProtClustDB:CLSZ2433459 Uniprot:Q9U0I1
Length = 904
Score = 149 (57.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 43/106 (40%), Positives = 61/106 (57%)
Query: 149 NGIKNF--LENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGEN 206
NG K L+ ++ L Y KKK+ IH+ + +K +G PNVGKS LIN +L
Sbjct: 636 NGKKEIIVLKKLIN-RLCYHIIEKKKK-KGIHNYK-VKCIFIGLPNVGKSALINRILEIK 692
Query: 207 RVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEK 252
+ +YD PG T + I+ Y+NKKY LIDT GI +N +++ EK
Sbjct: 693 KAKSYDNPGLTTN-IQM---YSNKKYELIDTPGILAQN-LYKIKEK 733
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 334 SAIKLNNINSFMESINHVYDSSII-HLS 360
+ + + N N++M N++Y ++ H+S
Sbjct: 757 NVVSIKNYNNYMHVENNIYLLALCNHIS 784
>TIGR_CMR|SPO_0691 [details] [associations]
symbol:SPO_0691 "GTP-binding protein Era" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016049 "cell growth" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20
InterPro:IPR015946 OMA:ITREQLF SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 HOGENOM:HOG000245597
RefSeq:YP_165946.1 ProteinModelPortal:Q5LVK9 GeneID:3195765
KEGG:sil:SPO0691 PATRIC:23374651 Uniprot:Q5LVK9
Length = 301
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/123 (26%), Positives = 67/123 (54%)
Query: 185 VAIVGKPNVGKSTLINSLLGEN-RVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
VA++G+PN GKSTL+N ++G ++T+ TTR I+ + + + +DT G+ +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQ-TTRTRIRGVAMEGEAQIVFVDTPGLFQP 66
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYE--SGRSLIVCVN 301
+ +++ V +A++V+L+++A + I+ I + E GR++ + +N
Sbjct: 67 RRR---LDRAMVAAAWGGAADADIVVLMIEAHRGITEGVERILEGLAEIAKGRTVALAIN 123
Query: 302 KWD 304
K D
Sbjct: 124 KID 126
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 41/168 (24%), Positives = 69/168 (41%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGG-FEPE 63
+ L+G PN GKSTL NR+ ++ ++V + TR R G G+ + +DT G F+P
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRTRIRGVAMEGEAQIVFVDTPGLFQP- 66
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK--SGQPIVLVXXXX 121
++ + M ++ +G+ E + I L + G+ + L
Sbjct: 67 -RRRLDRAMVAAAWGGAADADIVVLMIEAHRGITEGVERILEGLAEIAKGRTVALAINKI 125
Query: 122 XXXXXXXXLDFYE-----LGIGNPHIISALYGNGIKNFLENILTIELP 164
L E +ISA G+G+++ L L ELP
Sbjct: 126 DRVPAEKLLGLSEALNARFEFARTFMISAERGHGVED-LRKWLAAELP 172
>TAIR|locus:2154915 [details] [associations]
symbol:AT5G66470 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 eggNOG:COG1159
HOGENOM:HOG000245596 KO:K03595 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
EMBL:AY065195 EMBL:AY093245 IPI:IPI00521579 RefSeq:NP_201448.2
UniGene:At.28631 ProteinModelPortal:Q8VZ74 SMR:Q8VZ74 IntAct:Q8VZ74
STRING:Q8VZ74 PaxDb:Q8VZ74 PRIDE:Q8VZ74 EnsemblPlants:AT5G66470.1
GeneID:836779 KEGG:ath:AT5G66470 TAIR:At5g66470 InParanoid:Q8VZ74
PhylomeDB:Q8VZ74 ProtClustDB:CLSN2690267 ArrayExpress:Q8VZ74
Genevestigator:Q8VZ74 Uniprot:Q8VZ74
Length = 427
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 66/276 (23%), Positives = 116/276 (42%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VG PNVGKSTL N++ + ++V + P TR R G + I+ DT G +
Sbjct: 132 VAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKK 191
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLR--KSGQPIVLVXXXXX 122
+ M K + A VD + ++++ L + P++LV
Sbjct: 192 MHRLDTMMMKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGDLEKKPPMLLVMNKKD 251
Query: 123 XXX---XXXXLDFYELGIGNPHII--SALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
L++YE +I SA YG+GI++ E IL+ +LP+ + K+ +
Sbjct: 252 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWILS-KLPFGPPYYPKDIVSE 310
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD--SIKSLFEYNNKKYILI 235
H + IV + + + V++Y T +D ++ + + N++K ILI
Sbjct: 311 HPERFFVSEIVREKIFMQYRNEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILI 370
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTL--KSILEANVVI 269
G + KT + + L K LE V +
Sbjct: 371 GKEG--KALKTLATAARLDIEDFLQKKVFLEVEVKV 404
Score = 133 (51.9 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG PNVGKSTL N ++G+ I D P TTR I + + IL DT G+
Sbjct: 132 VAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIE-- 189
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDA 274
K ++ + + + A+ V++L+DA
Sbjct: 190 KKMHRLDTMMMKNVRDAAINADCVVILVDA 219
>RGD|1305367 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006400 "tRNA modification" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 RGD:1305367 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006400 CTD:84705 eggNOG:COG0486
HOGENOM:HOG000200714 HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 HSSP:Q9WYA4 GeneTree:ENSGT00390000016851
EMBL:BC087083 IPI:IPI00358231 RefSeq:NP_001011919.1
UniGene:Rn.109111 ProteinModelPortal:Q5PQQ1 STRING:Q5PQQ1
PhosphoSite:Q5PQQ1 PRIDE:Q5PQQ1 Ensembl:ENSRNOT00000060355
GeneID:290633 KEGG:rno:290633 UCSC:RGD:1305367 NextBio:631337
Genevestigator:Q5PQQ1 Uniprot:Q5PQQ1
Length = 492
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/130 (31%), Positives = 71/130 (54%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRV-ITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
V + G PN GKS+L+N LL + V I PGTTRD +++ + +L DTAG+R
Sbjct: 252 VVVAGPPNAGKSSLVN-LLSQKPVSIVSPEPGTTRDILETPVDLAGFPVLLSDTAGLR-- 308
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ-----DINIANFI---YESGRS 295
+ +E+ V + + + +A++++ +LDA S+ D +A + ++SGR
Sbjct: 309 -EGAGAVEQEGVRRARQRLEQADIILGMLDASDLASSSSCSFLDTVVAPLVAQSHDSGRQ 367
Query: 296 -LIVCVNKWD 304
L++ +NK D
Sbjct: 368 RLLLLLNKSD 377
>UNIPROTKB|Q7RM79 [details] [associations]
symbol:PY02306 "Uncharacterized protein" species:73239
"Plasmodium yoelii yoelii" [GO:0003924 "GTPase activity"
evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA] [GO:0006184
"GTP catabolic process" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR006073 Pfam:PF01926
GO:GO:0005525 GO:GO:0005730 GO:GO:0003924 GO:GO:0042254
eggNOG:COG1161 EMBL:AABL01000631 RefSeq:XP_730178.1
ProteinModelPortal:Q7RM79 GeneID:3807478 KEGG:pyo:PY02306
EuPathDB:PlasmoDB:PY02306 Uniprot:Q7RM79
Length = 779
Score = 137 (53.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/96 (37%), Positives = 50/96 (52%)
Query: 149 NGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRV 208
NG K + I ++ + K IH+ + +K +G PNVGKS LIN +L +
Sbjct: 511 NGKKEIIVLKKLINRLCERVIESKRKKGIHNYK-VKCIFLGLPNVGKSALINKILEIKKT 569
Query: 209 ITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+YD PG T K++ Y+ KKY LIDT GI N
Sbjct: 570 KSYDLPGLT----KNIQMYSTKKYELIDTPGIIAHN 601
Score = 42 (19.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 330 FNFISAIKLNNINSFMESINHVYDSSII-HLS 360
++ + + + N NS+M N++Y ++ H+S
Sbjct: 628 YSIDNIVNIKNYNSYMHVENNIYLLALCNHIS 659
>POMBASE|SPAC222.05c [details] [associations]
symbol:mss1 "mitochondrial GTPase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=ISM] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005743 "mitochondrial
inner membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0006412 "translation" evidence=ISO] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PomBase:SPAC222.05c GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0005743 GO:GO:0003924 GO:GO:0032543 GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH PIR:T50146 RefSeq:NP_593144.1 ProteinModelPortal:Q9UTE7
STRING:Q9UTE7 EnsemblFungi:SPAC222.05c.1 GeneID:2541951
KEGG:spo:SPAC222.05c OrthoDB:EOG4B2X62 NextBio:20803035
Uniprot:Q9UTE7
Length = 496
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRV-ITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
I VAI+G N GKS+LIN LL R+ I GTTRD+I+ L + N +L DTAG+R
Sbjct: 240 INVAILGPSNAGKSSLIN-LLANRRISIVSPQSGTTRDAIEVLVDINGFPVLLSDTAGLR 298
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
+ E IEK I+ K+ E + + L +
Sbjct: 299 KGEDVQE-IEKIG-IEIAKARAEESQLTLFV 327
>TIGR_CMR|CJE_0763 [details] [associations]
symbol:CJE_0763 "GTP-binding protein Era" species:195099
"Campylobacter jejuni RM1221" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0042254
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814
eggNOG:COG1159 RefSeq:YP_178772.1 ProteinModelPortal:Q5HVB3
STRING:Q5HVB3 GeneID:3230715 KEGG:cjr:CJE0763 PATRIC:20043259
HOGENOM:HOG000245596 KO:K03595 OMA:ATRRKIN ProtClustDB:PRK00089
BioCyc:CJEJ195099:GJC0-779-MONOMER TIGRFAMs:TIGR00436
Uniprot:Q5HVB3
Length = 291
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+I+G+ N GKSTLINSLL E + TR IK++ + + I IDT G+
Sbjct: 6 VSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKAIVMHEKNQIIFIDTPGLHESG 65
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR-SLIVCVNKW 303
T + + V +KS+ + +V++ + S +D NF+ + + I+ +NK
Sbjct: 66 AT---LNQLLVQSAIKSMGDCDVILFVASVFD--STKDYE--NFLSLNPQVPHIIALNKV 118
Query: 304 D 304
D
Sbjct: 119 D 119
>TIGR_CMR|CBU_1502 [details] [associations]
symbol:CBU_1502 "GTP-binding protein Era" species:227377
"Coxiella burnetii RSA 493" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016049 "cell growth" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0019843 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 eggNOG:COG1159
HOGENOM:HOG000245596 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 EMBL:L27436 PIR:S60768 RefSeq:NP_820485.1
ProteinModelPortal:P51836 SMR:P51836 GeneID:1209412
KEGG:cbu:CBU_1502 PATRIC:17931769 OMA:KVAKDWQ
BioCyc:CBUR227377:GJ7S-1487-MONOMER Uniprot:P51836
Length = 295
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/120 (29%), Positives = 64/120 (53%)
Query: 186 AIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNK 245
AI+G+PNVGKSTL+N LL + IT P TTR I + + + + I +DT G+
Sbjct: 10 AIIGRPNVGKSTLLNQLLEQKISITSRKPQTTRYQILGVKTFKDIQVIYVDTPGLHAG-- 67
Query: 246 TFEVIEKFSVIKTLKSIL-EANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
T I ++ + +T + L + + ++ +++ +QD + + + E + + +NK D
Sbjct: 68 TERTINRY-MNRTARGALRDVDAIVFVIEPHWE--SQDAWVLDNLKEIETPVFLVINKVD 124
>UNIPROTKB|Q71ZH9 [details] [associations]
symbol:LMOf2365_1510 "Putative GTPase" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006073 Pfam:PF01926
GO:GO:0005525 EMBL:AE017262 GenomeReviews:AE017262_GR KO:K06948
eggNOG:COG1161 HOGENOM:HOG000016390 ProtClustDB:PRK13796
InterPro:IPR019988 TIGRFAMs:TIGR03597 RefSeq:YP_014108.1
ProteinModelPortal:Q71ZH9 STRING:Q71ZH9 GeneID:2797679
KEGG:lmf:LMOf2365_1510 PATRIC:20324259 OMA:LCQRCFR Uniprot:Q71ZH9
Length = 366
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 185 VAIVGKPNVGKSTLINSLL----GENRVITYDT-PGTTRDSIKSLFEYNNKKYILIDTAG 239
V +VG NVGKSTLIN ++ GEN VIT PGTT D I+ N +L+DT G
Sbjct: 163 VYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGN---VLVDTPG 219
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
I ++ I+ + +K + E + L+ +Q + + +++ +SL+V
Sbjct: 220 IINHHQMAHFIDT-TTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLVVY 278
Query: 300 VN 301
V+
Sbjct: 279 VS 280
>TIGR_CMR|NSE_0959 [details] [associations]
symbol:NSE_0959 "GTP-binding protein Era" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0042274
GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_506823.1
ProteinModelPortal:Q2GCH3 STRING:Q2GCH3 GeneID:3931774
KEGG:nse:NSE_0959 PATRIC:22681891
BioCyc:NSEN222891:GHFU-961-MONOMER Uniprot:Q2GCH3
Length = 308
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 49/177 (27%), Positives = 79/177 (44%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGG-FEPEVK 65
L+G NVGKSTL N L S+ + V + TR R G + +DT G F P +
Sbjct: 27 LIGNSNVGKSTLLNALIGSKISAVTHKVQTTRTRIRGIYTKDDVQLVFVDTPGIFIPRCQ 86
Query: 66 KGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXXXX 125
+ + K +A +D R+ + + K + LRK+ +VLV
Sbjct: 87 --LERVIVKNAWRAFAGTDIFCFIIDPRRPISDSTK---DILRKANGKLVLVINKIDLVE 141
Query: 126 XXXXLDF-YELG-IGN---PHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
L+ EL +G+ +ISAL GNG+ + + +L P +F K++ T++
Sbjct: 142 KPRLLEVAQELNSLGHFEKTFMISALKGNGVADLMNYLLKSAQPGPWYFDKEDETDM 198
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 31/121 (25%), Positives = 64/121 (52%)
Query: 185 VAIVGKPNVGKSTLINSLLGEN-RVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
V+++G NVGKSTL+N+L+G +T+ TTR I+ ++ ++ + + +DT GI
Sbjct: 25 VSLIGNSNVGKSTLLNALIGSKISAVTHKVQ-TTRTRIRGIYTKDDVQLVFVDTPGIFIP 83
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
+E+ V ++ ++ ++D ++ IS +I + ++ L++ +NK
Sbjct: 84 RCQ---LERVIVKNAWRAFAGTDIFCFIIDPRRPISDSTKDI---LRKANGKLVLVINKI 137
Query: 304 D 304
D
Sbjct: 138 D 138
>UNIPROTKB|Q5LW13 [details] [associations]
symbol:engB "Probable GTP-binding protein EngB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00321 InterPro:IPR006073
InterPro:IPR019987 Pfam:PF01926 GO:GO:0005525 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0007049 GO:GO:0000917
eggNOG:COG0218 HOGENOM:HOG000009835 KO:K03978 ProtClustDB:PRK00454
TIGRFAMs:TIGR03598 HSSP:O57939 RefSeq:YP_165792.1
ProteinModelPortal:Q5LW13 GeneID:3194815 KEGG:sil:SPO0530
PATRIC:23374323 OMA:FIWASPS Uniprot:Q5LW13
Length = 217
Score = 121 (47.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVI-TYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
++V G+ NVGKS+LIN+L G + +TPG T++ + F + Y L+D G
Sbjct: 46 VEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEI--NFFTQGPELY-LVDLPGYG 102
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVI----LLLDAQQNISAQDINIANFIYESGRSLI 297
N +V+EK+ K LK L + +L+DA+ + A D I + S +
Sbjct: 103 YANAPLKVVEKWQ--KLLKQYLSGRQTLRRAFVLIDARHGVKAVDDEIMKLLDTSAVTFQ 160
Query: 298 VCVNKWD 304
+ K D
Sbjct: 161 CVLTKAD 167
>TIGR_CMR|SPO_0530 [details] [associations]
symbol:SPO_0530 "GTP-binding protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00321
InterPro:IPR006073 InterPro:IPR019987 Pfam:PF01926 GO:GO:0005525
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0007049 GO:GO:0000917
eggNOG:COG0218 HOGENOM:HOG000009835 KO:K03978 ProtClustDB:PRK00454
TIGRFAMs:TIGR03598 HSSP:O57939 RefSeq:YP_165792.1
ProteinModelPortal:Q5LW13 GeneID:3194815 KEGG:sil:SPO0530
PATRIC:23374323 OMA:FIWASPS Uniprot:Q5LW13
Length = 217
Score = 121 (47.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVI-TYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
++V G+ NVGKS+LIN+L G + +TPG T++ + F + Y L+D G
Sbjct: 46 VEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEI--NFFTQGPELY-LVDLPGYG 102
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVI----LLLDAQQNISAQDINIANFIYESGRSLI 297
N +V+EK+ K LK L + +L+DA+ + A D I + S +
Sbjct: 103 YANAPLKVVEKWQ--KLLKQYLSGRQTLRRAFVLIDARHGVKAVDDEIMKLLDTSAVTFQ 160
Query: 298 VCVNKWD 304
+ K D
Sbjct: 161 CVLTKAD 167
>UNIPROTKB|Q3ABV4 [details] [associations]
symbol:CHY_1548 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG1160
RefSeq:YP_360380.1 ProteinModelPortal:Q3ABV4 STRING:Q3ABV4
GeneID:3727802 KEGG:chy:CHY_1548 PATRIC:21276225
HOGENOM:HOG000287473 OMA:ILPQVQT
BioCyc:CHYD246194:GJCN-1547-MONOMER InterPro:IPR023873
TIGRFAMs:TIGR03918 Uniprot:Q3ABV4
Length = 397
Score = 126 (49.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE---YNNKKYI----LIDT 237
+ I G+ N GKSTL+N+++GE R IT PGTT D + FE Y ++I L DT
Sbjct: 12 IGIFGRCNAGKSTLLNNIIGEERAITSSIPGTTTDPNRRAFELLPYGPVEFIDTPGLDDT 71
Query: 238 A--GIRRRNKTFEVIEKFSVI 256
+ G R+ KT EV+ SV+
Sbjct: 72 SVLGEIRKAKTREVLATCSVV 92
>TIGR_CMR|CHY_1548 [details] [associations]
symbol:CHY_1548 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG1160 RefSeq:YP_360380.1
ProteinModelPortal:Q3ABV4 STRING:Q3ABV4 GeneID:3727802
KEGG:chy:CHY_1548 PATRIC:21276225 HOGENOM:HOG000287473 OMA:ILPQVQT
BioCyc:CHYD246194:GJCN-1547-MONOMER InterPro:IPR023873
TIGRFAMs:TIGR03918 Uniprot:Q3ABV4
Length = 397
Score = 126 (49.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE---YNNKKYI----LIDT 237
+ I G+ N GKSTL+N+++GE R IT PGTT D + FE Y ++I L DT
Sbjct: 12 IGIFGRCNAGKSTLLNNIIGEERAITSSIPGTTTDPNRRAFELLPYGPVEFIDTPGLDDT 71
Query: 238 A--GIRRRNKTFEVIEKFSVI 256
+ G R+ KT EV+ SV+
Sbjct: 72 SVLGEIRKAKTREVLATCSVV 92
>UNIPROTKB|Q969Y2 [details] [associations]
symbol:GTPBP3 "tRNA modification GTPase GTPBP3,
mitochondrial" species:9606 "Homo sapiens" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
EMBL:CH471106 EMBL:AC010463 CTD:84705 eggNOG:COG0486
HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 EMBL:AF360742
EMBL:AF361481 EMBL:AF360743 EMBL:AF360744 EMBL:AY078987
EMBL:AY078988 EMBL:AK027606 EMBL:AK291929 EMBL:AK297953
EMBL:BC017207 EMBL:BC019261 IPI:IPI00464994 IPI:IPI00644024
IPI:IPI00783945 IPI:IPI00982192 RefSeq:NP_001122327.1
RefSeq:NP_001182351.1 RefSeq:NP_116009.2 RefSeq:NP_598399.2
UniGene:Hs.334885 HSSP:Q9WYA4 ProteinModelPortal:Q969Y2 SMR:Q969Y2
IntAct:Q969Y2 MINT:MINT-2877402 STRING:Q969Y2 PhosphoSite:Q969Y2
DMDM:74731069 PaxDb:Q969Y2 PRIDE:Q969Y2 DNASU:84705
Ensembl:ENST00000324894 Ensembl:ENST00000358792
Ensembl:ENST00000361619 GeneID:84705 KEGG:hsa:84705 UCSC:uc002ngg.4
UCSC:uc002ngh.4 UCSC:uc010eas.3 GeneCards:GC19P017448
H-InvDB:HIX0014890 HGNC:HGNC:14880 HPA:HPA042158 MIM:580000
MIM:608536 neXtProt:NX_Q969Y2 PharmGKB:PA134883205 OMA:PGEFSEQ
GenomeRNAi:84705 NextBio:74792 ArrayExpress:Q969Y2 Bgee:Q969Y2
CleanEx:HS_GTPBP3 Genevestigator:Q969Y2 Uniprot:Q969Y2
Length = 492
Score = 126 (49.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ V + G PN GKS+L+N L + I PGTTRD +++ + +L DTAG+R
Sbjct: 250 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLR- 308
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN-IANFIYESG 293
+ +E+ V + + + +A++++ +LDA S N +A + G
Sbjct: 309 --EGVGPVEQEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVG 358
>UNIPROTKB|E1BH64 [details] [associations]
symbol:E1BH64 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:DAAA02019078
IPI:IPI00710937 ProteinModelPortal:E1BH64
Ensembl:ENSBTAT00000005506 Uniprot:E1BH64
Length = 493
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V + G PN GKS+L+N L + I PGTTRD +++ + +L DTAG+R
Sbjct: 254 VVVAGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGLR--- 310
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
+ +E+ V + K + +A++++ +LDA S N + +
Sbjct: 311 EGVGPVEQEGVRRAQKRLEQADLILAVLDASDLASPASCNFLDTV 355
>DICTYBASE|DDB_G0270228 [details] [associations]
symbol:gtpbp3 "GTP-binding protein 3" species:44689
"Dictyostelium discoideum" [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISS] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 dictyBase:DDB_G0270228
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003924 GO:GO:0006400 HSSP:P25522
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 RefSeq:XP_646629.1
ProteinModelPortal:Q55C52 STRING:Q55C52 EnsemblProtists:DDB0267051
GeneID:8617601 KEGG:ddi:DDB_G0270228 OMA:IRISGTH
ProtClustDB:CLSZ2431449 Uniprot:Q55C52
Length = 512
Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+AIVG PN GKS+LIN L I GTTRD ++ + + + I+ DTAG+R N
Sbjct: 249 IAIVGPPNAGKSSLINLLTNRKASIVSPIAGTTRDIVEVILDIDGYPVIIGDTAGLR--N 306
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDA 274
T + IE + +++ + L D+
Sbjct: 307 STNDQIEIEGIEMAKDRFNNSDIKLFLFDS 336
>TIGR_CMR|DET_1503 [details] [associations]
symbol:DET_1503 "ferrous iron transport protein B,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0015639 "ferrous iron uptake transmembrane transporter
activity" evidence=ISS] [GO:0015684 "ferrous iron transport"
evidence=ISS] InterPro:IPR006073 InterPro:IPR011619
InterPro:IPR011640 InterPro:IPR011642 Pfam:PF02421 Pfam:PF07664
Pfam:PF07670 PRINTS:PR00326 GO:GO:0005525 GO:GO:0016021
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0015093
eggNOG:COG0370 KO:K04759 RefSeq:YP_182203.1
ProteinModelPortal:Q3Z6E6 STRING:Q3Z6E6 GeneID:3229252
KEGG:det:DET1503 PATRIC:21610028 HOGENOM:HOG000054022 OMA:VINILNF
ProtClustDB:CLSK836888 BioCyc:DETH243164:GJNF-1504-MONOMER
Uniprot:Q3Z6E6
Length = 576
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 51/172 (29%), Positives = 73/172 (42%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGG- 59
MK VL L G PNVGKS +F RLT + + ANYPG T G+ +G + +ID G
Sbjct: 1 MKKVL-LFGNPNVGKSVVFTRLTGVQ-TMSANYPGTTVTFSRGQMKLGDEIAEVIDVPGS 58
Query: 60 --FEPEVKKGIM-HEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
EP + I+ M + VD +E++ +T L + G P V+
Sbjct: 59 YTLEPTCEAEIVARRMLDEVAADKEGEVIILNVVDATN--LERNLYLTQQLLERGLPTVI 116
Query: 117 VXXX---XXXXXXXXXLDFYELGIGNPHI-ISALYGNGIKNFLENILTIELP 164
LD +G P SA G GIK + +L+ ++P
Sbjct: 117 AMNMWDETRHKGIKIELDRLSEILGVPIAPTSATSGEGIKQLVVQLLSPQIP 168
>MGI|MGI:1917609 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 MGI:MGI:1917609 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
CTD:84705 eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
EMBL:AF361482 EMBL:AY029613 EMBL:BC092042 IPI:IPI00338388
IPI:IPI00556865 RefSeq:NP_115933.2 RefSeq:XP_003689533.1
UniGene:Mm.142112 ProteinModelPortal:Q923K4 SMR:Q923K4
STRING:Q923K4 PhosphoSite:Q923K4 PaxDb:Q923K4 PRIDE:Q923K4
Ensembl:ENSMUST00000007754 Ensembl:ENSMUST00000095259
Ensembl:ENSMUST00000150969 GeneID:100862531 GeneID:70359
KEGG:mmu:100862531 KEGG:mmu:70359 GeneTree:ENSGT00390000016851
InParanoid:Q923K4 NextBio:331446 Bgee:Q923K4 CleanEx:MM_GTPBP3
Genevestigator:Q923K4 Uniprot:Q923K4
Length = 492
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 39/130 (30%), Positives = 68/130 (52%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRV-ITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
V + G PN GKS+L+N LL + V I PGTTRD +++ + +L DTAG+R
Sbjct: 252 VVVTGPPNAGKSSLVN-LLSQKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLR-- 308
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ-----DINIANFIYES----GR 294
+ +E+ V + + +A++++ +LDA S+ D + + +S G+
Sbjct: 309 -EGVGAVEQEGVRRARHRLEQADIILGVLDASDLASSSSCSFLDTVVTPLLAQSQDSGGQ 367
Query: 295 SLIVCVNKWD 304
L++ +NK D
Sbjct: 368 RLLLLLNKSD 377
>ASPGD|ASPL0000031943 [details] [associations]
symbol:AN5518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR006073 InterPro:IPR019987 Pfam:PF01926
GO:GO:0005525 EMBL:BN001305 GO:GO:0000917 EMBL:AACD01000094
eggNOG:COG0218 KO:K03978 TIGRFAMs:TIGR03598 OrthoDB:EOG4R7ZM0
RefSeq:XP_663122.1 ProteinModelPortal:Q5B1R2 STRING:Q5B1R2
EnsemblFungi:CADANIAT00003567 GeneID:2871811 KEGG:ani:AN5518.2
HOGENOM:HOG000216645 OMA:GRTREMN Uniprot:Q5B1R2
Length = 332
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 166 KKFFKKKEF--TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKS 223
KK + +F T + SIE +VA +G+ NVGKS+L+N+++G+ T PG TR+ +
Sbjct: 85 KKLWSAAKFRTTPLSSIEP-EVAFLGRSNVGKSSLLNAVMGKEMCWTSSKPGRTREM--N 141
Query: 224 LF-----EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
F + K +L+D G + ++T +E ++K L+ + LL+D++ I
Sbjct: 142 AFGIGGTKGGESKIVLLDMPGYGKASRTEWGVE---IMKYLQGRKQLRRAFLLIDSEHGI 198
Query: 279 SAQDINI 285
D I
Sbjct: 199 KPTDAAI 205
>TIGR_CMR|ECH_0060 [details] [associations]
symbol:ECH_0060 "tRNA modification GTPase TrmE"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291 OMA:IDFPEEV
RefSeq:YP_506891.1 ProteinModelPortal:Q2GI42 STRING:Q2GI42
GeneID:3927317 KEGG:ech:ECH_0060 PATRIC:20575687
BioCyc:ECHA205920:GJNR-60-MONOMER Uniprot:Q2GI42
Length = 439
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
I V I+G+PN GKSTL N L + I + GTTRD +++ + I+IDTAGIR
Sbjct: 212 IYVTILGEPNSGKSTLFNHLAKRDIAIVSEYAGTTRDPLEAHIDVAGYPIIIIDTAGIRE 271
Query: 243 RNKTFE 248
E
Sbjct: 272 STDPVE 277
>UNIPROTKB|Q8EAH6 [details] [associations]
symbol:hydF "Fe hydrogenase maturation GTPase HydF"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P25522
HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 33/121 (27%), Positives = 61/121 (50%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI-DTAGIRRR 243
+A+VG+ N GKS+L+N L G+ I D GTT D++ +E + DTAGI
Sbjct: 5 IALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYELQPLGPVTFYDTAGIDDE 64
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
+ V T + + +++ +L++D +Q + D+ + + I + +++ NK
Sbjct: 65 G----TLGAMRVSATRRVLFRSDMALLVVD-EQGLCPSDMALIDEIRQLQMPILMVFNKA 119
Query: 304 D 304
D
Sbjct: 120 D 120
>TIGR_CMR|SO_3926 [details] [associations]
symbol:SO_3926 "GTP-binding protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P25522 HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 33/121 (27%), Positives = 61/121 (50%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI-DTAGIRRR 243
+A+VG+ N GKS+L+N L G+ I D GTT D++ +E + DTAGI
Sbjct: 5 IALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYELQPLGPVTFYDTAGIDDE 64
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
+ V T + + +++ +L++D +Q + D+ + + I + +++ NK
Sbjct: 65 G----TLGAMRVSATRRVLFRSDMALLVVD-EQGLCPSDMALIDEIRQLQMPILMVFNKA 119
Query: 304 D 304
D
Sbjct: 120 D 120
>UNIPROTKB|B5X2B8 [details] [associations]
symbol:eral1 "GTPase Era, mitochondrial" species:8030
"Salmo salar" [GO:0000028 "ribosomal small subunit assembly"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0019843 "rRNA binding" evidence=ISS] [GO:0043024 "ribosomal
small subunit binding" evidence=ISS] InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0005759
GO:GO:0019843 GO:GO:0000028 GO:GO:0043024 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 HOVERGEN:HBG051495 EMBL:BT045187
EMBL:BT059676 RefSeq:NP_001133545.1 UniGene:Ssa.32452
ProteinModelPortal:B5X2B8 GeneID:100195044 CTD:100195044
Uniprot:B5X2B8
Length = 457
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 30/92 (32%), Positives = 48/92 (52%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++VAI+G PN GKSTL N LLG TTR + ++ + IL+DT G+
Sbjct: 109 LRVAIIGAPNAGKSTLSNQLLGRKVFAVSKKVHTTRARALGVLTEDDTQIILLDTPGLTT 168
Query: 243 RNKTFE-VIEKFSVIKTLKSILEANVVILLLD 273
K +EK + ++ EA +V++++D
Sbjct: 169 PTKVKRHQLEKSLLEDPWNTVKEAGLVVVMVD 200
>UNIPROTKB|F1P349 [details] [associations]
symbol:ERAL1 "GTPase Era, mitochondrial" species:9031
"Gallus gallus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0000028
"ribosomal small subunit assembly" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0043024 "ribosomal small subunit binding"
evidence=IEA] HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 Pfam:PF01926 Pfam:PF07650
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005759 GO:GO:0019843
GO:GO:0000028 GO:GO:0043024 Gene3D:3.30.300.20 InterPro:IPR015946
GeneTree:ENSGT00390000013800 IPI:IPI00600649 OMA:TTTRNIS
EMBL:AADN02025859 Ensembl:ENSGALT00000006365 Uniprot:F1P349
Length = 458
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 28/104 (26%), Positives = 54/104 (51%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+++AI+G PN GKSTL N LLG TTR + + + + + I++DT G+
Sbjct: 88 LRIAIIGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCKARGVITHEDTQLIILDTPGLTS 147
Query: 243 RNKTFE-VIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
K +E + S+ A++V++L+D ++ + +++
Sbjct: 148 PMKAKRHKLEAAMLTDPWDSMKHADLVLVLVDVSEHWTRNSLSL 191
>TIGR_CMR|GSU_1380 [details] [associations]
symbol:GSU_1380 "ferrous iron transport protein B"
species:243231 "Geobacter sulfurreducens PCA" [GO:0015639 "ferrous
iron uptake transmembrane transporter activity" evidence=ISS]
[GO:0015684 "ferrous iron transport" evidence=ISS]
InterPro:IPR003373 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR011619 InterPro:IPR011640 InterPro:IPR011642
Pfam:PF02421 Pfam:PF07664 Pfam:PF07670 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0016021 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0015093 KO:K04759
TIGRFAMs:TIGR00437 HOGENOM:HOG000054022 RefSeq:NP_952433.1
ProteinModelPortal:Q74DD6 GeneID:2685745 KEGG:gsu:GSU1380
PATRIC:22025535 OMA:FIFGFFR ProtClustDB:CLSK782543
BioCyc:GSUL243231:GH27-1331-MONOMER Uniprot:Q74DD6
Length = 663
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
KVA+VG PNVGKS L N+L G ++ + PGT+ + + + + +IDT G+
Sbjct: 23 KVALVGNPNVGKSVLFNALTGAYVAVS-NYPGTSVEVSRGSASFEGGSWEIIDTPGMY-- 79
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
+ E+ V + + +VV+ +LDA+ N+ + + E+G +I+ VN
Sbjct: 80 -SILPITEEERVAREILLTERPDVVLHVLDAR-NLERMLVMTLQLV-EAGLPVILVVNIM 136
Query: 304 D 304
D
Sbjct: 137 D 137
>ZFIN|ZDB-GENE-050522-335 [details] [associations]
symbol:gtpbp3 "GTP binding protein 3" species:7955
"Danio rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 ZFIN:ZDB-GENE-050522-335 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
EMBL:BC095801 IPI:IPI00500987 RefSeq:NP_001018605.1
UniGene:Dr.41738 HSSP:P25522 ProteinModelPortal:Q501Z5 SMR:Q501Z5
STRING:Q501Z5 GeneID:553807 KEGG:dre:553807 CTD:84705
eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
InParanoid:Q501Z5 KO:K03650 OrthoDB:EOG4WH8KW NextBio:20880525
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 Uniprot:Q501Z5
Length = 500
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ V I G N GKS+L+N L I T GTTRD ++ + +L DTAG+R
Sbjct: 249 VHVVIAGSTNAGKSSLLNLLTQRPAAIVSPTAGTTRDVLEVPLDIGGYPVLLSDTAGLR- 307
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
T + +E+ V + + + +A++ ++++D Q
Sbjct: 308 --DTSDSVEQEGVRRARQRVEQADLSLVVVDLTQ 339
>UNIPROTKB|E2RE04 [details] [associations]
symbol:GTPBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 InterPro:IPR025867 Pfam:PF12631 OMA:IRISGTH
GeneTree:ENSGT00390000016851 EMBL:AAEX03012297
Ensembl:ENSCAFT00000024419 Uniprot:E2RE04
Length = 399
Score = 115 (45.5 bits), Expect = 0.00078, P = 0.00078
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+ + G PN GKS+L+N L + I PGTTRD +++ + +L DTAG+R
Sbjct: 159 IVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGLREGA 218
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDA 274
+E+ V + + + +A++++ +LDA
Sbjct: 219 GP---VEQEGVRRARQRLEQADLILAVLDA 245
>UNIPROTKB|Q81WJ8 [details] [associations]
symbol:BAS3689 "Ribosome biogenesis GTPase A" species:1392
"Bacillus anthracis" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR HSSP:Q9X1F8
Gene3D:1.10.1580.10 InterPro:IPR023179 InterPro:IPR016478
PIRSF:PIRSF006230 InterPro:IPR019991 TIGRFAMs:TIGR03596
HOGENOM:HOG000003788 KO:K14540 OMA:GMLWPRI ProtClustDB:PRK09563
RefSeq:NP_846218.1 RefSeq:YP_020615.1 RefSeq:YP_029940.1
ProteinModelPortal:Q81WJ8 SMR:Q81WJ8 DNASU:1086795
EnsemblBacteria:EBBACT00000011382 EnsemblBacteria:EBBACT00000018382
EnsemblBacteria:EBBACT00000023612 GeneID:1086795 GeneID:2820017
GeneID:2848163 KEGG:ban:BA_3976 KEGG:bar:GBAA_3976 KEGG:bat:BAS3689
BioCyc:BANT260799:GJAJ-3747-MONOMER
BioCyc:BANT261594:GJ7F-3864-MONOMER Uniprot:Q81WJ8
Length = 296
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 50/175 (28%), Positives = 72/175 (41%)
Query: 67 GIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXXXXX 126
G M + +Q + VD R L ++ +I + + +VL
Sbjct: 8 GHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADMADDRL 67
Query: 127 XXXLDFYELGIGNPHI-ISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKV 185
Y G+ I I+A G G+K E ++ K+ F K I I+
Sbjct: 68 TKQWIAYFKEKGHMAISINAQAGQGMK---EIAAACKVLVKEKFDKMVAKGIRP-RVIRA 123
Query: 186 AIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
IVG PNVGKSTLIN L +N T D PG T + + + K+ L+DT GI
Sbjct: 124 LIVGIPNVGKSTLINKLAKKNIAKTGDRPGVT--TAQQWIKVG-KEMELLDTPGI 175
>TIGR_CMR|BA_3976 [details] [associations]
symbol:BA_3976 "GTPase family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006073 Pfam:PF01926
GO:GO:0005525 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR HSSP:Q9X1F8 Gene3D:1.10.1580.10
InterPro:IPR023179 InterPro:IPR016478 PIRSF:PIRSF006230
InterPro:IPR019991 TIGRFAMs:TIGR03596 HOGENOM:HOG000003788
KO:K14540 OMA:GMLWPRI ProtClustDB:PRK09563 RefSeq:NP_846218.1
RefSeq:YP_020615.1 RefSeq:YP_029940.1 ProteinModelPortal:Q81WJ8
SMR:Q81WJ8 DNASU:1086795 EnsemblBacteria:EBBACT00000011382
EnsemblBacteria:EBBACT00000018382 EnsemblBacteria:EBBACT00000023612
GeneID:1086795 GeneID:2820017 GeneID:2848163 KEGG:ban:BA_3976
KEGG:bar:GBAA_3976 KEGG:bat:BAS3689
BioCyc:BANT260799:GJAJ-3747-MONOMER
BioCyc:BANT261594:GJ7F-3864-MONOMER Uniprot:Q81WJ8
Length = 296
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 50/175 (28%), Positives = 72/175 (41%)
Query: 67 GIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXXXXX 126
G M + +Q + VD R L ++ +I + + +VL
Sbjct: 8 GHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADMADDRL 67
Query: 127 XXXLDFYELGIGNPHI-ISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKV 185
Y G+ I I+A G G+K E ++ K+ F K I I+
Sbjct: 68 TKQWIAYFKEKGHMAISINAQAGQGMK---EIAAACKVLVKEKFDKMVAKGIRP-RVIRA 123
Query: 186 AIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
IVG PNVGKSTLIN L +N T D PG T + + + K+ L+DT GI
Sbjct: 124 LIVGIPNVGKSTLINKLAKKNIAKTGDRPGVT--TAQQWIKVG-KEMELLDTPGI 175
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 419 379 0.00089 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 597 (63 KB)
Total size of DFA: 216 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.59u 0.15s 29.74t Elapsed: 00:00:02
Total cpu time: 29.61u 0.15s 29.76t Elapsed: 00:00:02
Start: Thu Aug 15 11:43:58 2013 End: Thu Aug 15 11:44:00 2013