BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17090
(373 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2JIV0|SYH_BURP8 Histidine--tRNA ligase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=hisS PE=3 SV=1
Length = 446
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/374 (52%), Positives = 266/374 (71%), Gaps = 4/374 (1%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER K+ ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDTDAEIILMCQRLWDDLGLTGIKLEINSLGLAEERAKHRVELIAYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
KH D ED K LY N LRVLD+KN ++ + NAPKL+D+L +S HF G+Q+IL
Sbjct: 193 KHMDV--LDEDAKRRLYTNPLRVLDTKNPALQAVAQNAPKLIDFLGDESRAHFEGLQRIL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ N+ + CD+Y+ H G+ A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGIERILELLKEENLVPE-NEGCDVYVAHQGEAARDQAFIVAERLRDTGLDVILHCSP 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE-DPTLKQISISFKDA 359
+ SFKSQMKRA+AS A FA I+GE+EI N T +K LR+ + + +Q ++ +D
Sbjct: 370 DGQASSFKSQMKRADASGAAFAVILGEDEIANGTAGVKALRDSSQSNGKSEQQTVPLEDL 429
Query: 360 ENYFYKKIIKNINN 373
Y ++ + +
Sbjct: 430 TEYLINAMVASTED 443
>sp|Q13X29|SYH_BURXL Histidine--tRNA ligase OS=Burkholderia xenovorans (strain LB400)
GN=hisS PE=3 SV=1
Length = 446
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 256/346 (73%), Gaps = 3/346 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LELNS+G +ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLELNSLGLAHERAAHRVELIAYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
KH D E+ K LY N LRVLD+KN ++E+ NAPKL+D+L ++S HF G+Q+IL
Sbjct: 193 KHMDV--LDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESRAHFEGLQRIL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNIPFTINQRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ + CD+Y+VH G+ A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGIERILELLKEEQLVPE-DEGCDVYVVHQGEAAREQAFIIAERLRDTGLDVILHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 346
+ SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+ D
Sbjct: 370 DGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRDTNAD 415
>sp|Q8Y029|SYH_RALSO Histidine--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000)
GN=hisS PE=3 SV=1
Length = 432
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/342 (55%), Positives = 252/342 (73%), Gaps = 3/342 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+ L++RPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE+PQ GRYRQF
Sbjct: 66 MYSFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHEKPQRGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPDIDAE+I+MC RLW +L L + LELNS+G ER + DLI Y++
Sbjct: 126 HQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAAHRADLIKYLE 185
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+D ED K LY N LRVLD+KN ++E+ APKL+DYL ++S HF G+QK+L
Sbjct: 186 GFQD--ILDEDSKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGEESCAHFEGVQKLL 243
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI + IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++ K PA G
Sbjct: 244 KANNIPFTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQIGGKPAPACG 303
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+G+ER+IEL+++ N+ D+YIVH G EA+++A V +E LR GL VIL+
Sbjct: 304 WAMGVERIIELLREENLAPE-PQGSDVYIVHQGDEAQVQALVAAERLRDAGLDVILHASA 362
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQ KRA+AS A +A IIG++E+ + + IK LR
Sbjct: 363 EGRNGSFKSQFKRADASGAAYAVIIGDDEVASGVVQIKPLRG 404
>sp|B2SXS9|SYH_BURPP Histidine--tRNA ligase OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=hisS PE=3 SV=1
Length = 446
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/342 (55%), Positives = 253/342 (73%), Gaps = 3/342 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI +++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLEINSLGLAEERAAHRVELIAHLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
KH D E+ K LY N LRVLD+KN ++E+ NAPKL+D+L ++S HF G+Q+IL
Sbjct: 193 KHMDV--LDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESRAHFEGLQRIL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ + CD+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGIERILELLKEEQLVPE-DEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+
Sbjct: 370 DGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD 411
>sp|Q2SWE3|SYH_BURTA Histidine--tRNA ligase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=hisS PE=1 SV=1
Length = 446
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/348 (54%), Positives = 253/348 (72%), Gaps = 7/348 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+++MC RLW++L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAPKL+D+L S HF G+Q++L
Sbjct: 193 QHADK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+GIER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGIERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 346
+ SFKSQMKRA+AS A FA I GE+E+ N T +K LR +D
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDD 415
>sp|A9AGZ7|SYH_BURM1 Histidine--tRNA ligase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=hisS PE=3 SV=1
Length = 446
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 249/346 (71%), Gaps = 3/346 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG++L++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D+ ED K LY N LRVLD+KN ++EI NAPKL+D+L S HF G+Q++L
Sbjct: 193 QHVDA--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ N+ D+Y+VH G A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEENLAPE-QEGVDVYVVHQGDAAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 346
+ SFKSQMKRA+AS A FA I GE E+ N T+ +K LR D
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGTGGD 415
>sp|Q46ZI4|SYH_CUPPJ Histidine--tRNA ligase OS=Cupriavidus pinatubonensis (strain JMP134
/ LMG 1197) GN=hisS PE=3 SV=1
Length = 456
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/342 (55%), Positives = 254/342 (74%), Gaps = 3/342 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+ L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHERPQ GRYRQF
Sbjct: 87 MYSFTDALNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHERPQRGRYRQF 146
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+G EA+GF GPD+DAE+I+MC RLW +L L + LE+NS+G +ER + +LI Y++
Sbjct: 147 HQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTGVRLEINSLGQAHERAAHREELIKYLE 206
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
KD ED K LY N LRVLD+KN ++E+ NAPKL+D+L ++SL HF G+Q++L
Sbjct: 207 GFKD--ILDEDGKRRLYTNPLRVLDTKNPALQEMAANAPKLIDFLGEESLAHFEGVQRLL 264
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI YKIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI + K PA G
Sbjct: 265 KANNIPYKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIAQMGGKAAPACG 324
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER+IELI++ + + + CD+Y+VH G+ A+ +A V +E LR GL V+L+
Sbjct: 325 WAMGIERIIELIREEGVVPD-AVGCDVYLVHQGEAAQQQATVAAERLRDAGLDVVLHATP 383
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A +A IIGE+E+ + +K+LR
Sbjct: 384 DGKSGSFKSQMKRADASGAAYAVIIGEDEVAAGVVQVKELRQ 425
>sp|A4JEN9|SYH_BURVG Histidine--tRNA ligase OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=hisS PE=3 SV=1
Length = 446
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 250/346 (72%), Gaps = 3/346 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D ED K LY N LRVLD+KN ++EI NAPKL+D+L +S HF G+Q++L
Sbjct: 193 QHVDV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ ++ D+Y+VH G+ A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEEDLAPE-QEGVDVYVVHQGEAAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 346
+ SFKSQMKRA+AS A FA I GE E+ N T +K LR ++
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTAGVKALRGAGQE 415
>sp|A3NA53|SYH_BURP6 Histidine--tRNA ligase OS=Burkholderia pseudomallei (strain 668)
GN=hisS PE=3 SV=1
Length = 446
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 252/344 (73%), Gaps = 7/344 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAP+L+D+L S HF G+Q++L
Sbjct: 193 QHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+G+ER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I+GE+E+ N T+ +K LR
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVILGEDEVANGTVSVKPLRG 411
>sp|Q0BEW8|SYH_BURCM Histidine--tRNA ligase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=hisS PE=3 SV=1
Length = 446
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 250/346 (72%), Gaps = 3/346 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+ D ED K LY N LRVLD+KN ++EI NAPKL+D+L +S HF G+Q++L
Sbjct: 193 QFADV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ ++ D+Y+VH G+ A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEEDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 346
+ SFKSQMKRA+AS A FA I GE E+ N T+ +K LR E+
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEE 415
>sp|B1YR43|SYH_BURA4 Histidine--tRNA ligase OS=Burkholderia ambifaria (strain MC40-6)
GN=hisS PE=3 SV=1
Length = 446
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 250/346 (72%), Gaps = 3/346 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+ D ED K LY N LRVLD+KN ++EI NAPKL+D+L +S HF G+Q++L
Sbjct: 193 QFADV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ ++ D+Y+VH G+ A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEEDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 346
+ SFKSQMKRA+AS A FA I GE E+ N T+ +K LR E+
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEE 415
>sp|Q63UT2|SYH_BURPS Histidine--tRNA ligase OS=Burkholderia pseudomallei (strain K96243)
GN=hisS PE=3 SV=1
Length = 446
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAP+L+D+L S HF G+Q++L
Sbjct: 193 QHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+G+ER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411
>sp|A3NVX0|SYH_BURP0 Histidine--tRNA ligase OS=Burkholderia pseudomallei (strain 1106a)
GN=hisS PE=3 SV=1
Length = 446
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAP+L+D+L S HF G+Q++L
Sbjct: 193 QHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+G+ER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411
>sp|Q39FR0|SYH_BURS3 Histidine--tRNA ligase OS=Burkholderia sp. (strain 383) GN=hisS
PE=3 SV=1
Length = 446
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 249/346 (71%), Gaps = 3/346 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+ D ED K LY N LRVLD+KN ++EI NAPKL+D+L +S HF G+Q++L
Sbjct: 193 QFADV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ ++ D+Y+VH G+ A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEDDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 346
+ SFKSQMKRA+AS A FA I GE E+ N T+ +K LR D
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGGD 415
>sp|Q3JRQ5|SYH_BURP1 Histidine--tRNA ligase OS=Burkholderia pseudomallei (strain 1710b)
GN=hisS PE=3 SV=1
Length = 446
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAP+L+D+L S HF G+Q++L
Sbjct: 193 QHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQQLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+G+ER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411
>sp|A1V4K0|SYH_BURMS Histidine--tRNA ligase OS=Burkholderia mallei (strain SAVP1)
GN=hisS PE=3 SV=1
Length = 446
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAP+L+D+L S HF G+Q++L
Sbjct: 193 QHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQQLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+G+ER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411
>sp|Q62JW5|SYH_BURMA Histidine--tRNA ligase OS=Burkholderia mallei (strain ATCC 23344)
GN=hisS PE=3 SV=1
Length = 446
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAP+L+D+L S HF G+Q++L
Sbjct: 193 QHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQQLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+G+ER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411
>sp|A2S2A3|SYH_BURM9 Histidine--tRNA ligase OS=Burkholderia mallei (strain NCTC 10229)
GN=hisS PE=3 SV=1
Length = 446
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAP+L+D+L S HF G+Q++L
Sbjct: 193 QHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQQLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+G+ER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411
>sp|A3MK74|SYH_BURM7 Histidine--tRNA ligase OS=Burkholderia mallei (strain NCTC 10247)
GN=hisS PE=3 SV=1
Length = 446
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H D +D + LY N LRVLD+KN ++EI+ NAP+L+D+L S HF G+Q++L
Sbjct: 193 QHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSRAHFDGLQQLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 KANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
+A+G+ER++EL+K+ H Q D+Y+VH G A +AF+++E LR GL VIL+C
Sbjct: 311 WAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 367
Query: 299 VFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR
Sbjct: 368 SADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411
>sp|B4EAW8|SYH_BURCJ Histidine--tRNA ligase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=hisS PE=3 SV=1
Length = 446
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/342 (54%), Positives = 248/342 (72%), Gaps = 3/342 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+ D ED K LY N LRVLD+KN +++I NAPKL+D+L +S HF G+Q++L
Sbjct: 193 QFADV--LDEDAKRRLYTNPLRVLDTKNPALQDIAQNAPKLIDFLGDESRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ ++ D+Y+VH G+ A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEEDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE E+ N T+ +K LR
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRG 411
>sp|B1JT91|SYH_BURCC Histidine--tRNA ligase OS=Burkholderia cenocepacia (strain MC0-3)
GN=hisS PE=3 SV=1
Length = 446
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/342 (54%), Positives = 248/342 (72%), Gaps = 3/342 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+ D ED K LY N LRVLD+KN +++I NAPKL+D+L +S HF G+Q++L
Sbjct: 193 QFADV--LDEDAKRRLYTNPLRVLDTKNPALQDIAQNAPKLIDFLGDESRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ ++ D+Y+VH G+ A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEEDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE E+ N T+ +K LR
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRG 411
>sp|A0K7T5|SYH_BURCH Histidine--tRNA ligase OS=Burkholderia cenocepacia (strain HI2424)
GN=hisS PE=3 SV=1
Length = 446
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/342 (54%), Positives = 247/342 (72%), Gaps = 3/342 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+ D ED K LY N LRVLD+KN +++I NAPKL+D+L +S HF G+Q++L
Sbjct: 193 QFADV--LDEDAKRRLYTNPLRVLDTKNPALQDIAQNAPKLIDFLGDESRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ ++ D+Y+VH G A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEEDLAPE-QEGVDVYVVHQGDTAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE E+ N T+ +K LR
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRG 411
>sp|Q1BGX3|SYH_BURCA Histidine--tRNA ligase OS=Burkholderia cenocepacia (strain AU 1054)
GN=hisS PE=3 SV=1
Length = 446
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/342 (54%), Positives = 247/342 (72%), Gaps = 3/342 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD DAE+I+MC RLW +L L I LE+NS+G ER + ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+ D ED K LY N LRVLD+KN +++I NAPKL+D+L +S HF G+Q++L
Sbjct: 193 QFADV--LDEDAKRRLYTNPLRVLDTKNPALQDIAQNAPKLIDFLGDESRAHFEGLQRLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++ GGRYD LI++ K A G
Sbjct: 251 LANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER++EL+K+ ++ D+Y+VH G A +AF+ +E LR GL VI +C
Sbjct: 311 WAMGIERILELLKEEDLAPE-QEGVDVYVVHQGDTAREQAFIAAERLRDTGLDVIFHCSA 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
+ SFKSQMKRA+AS A FA I GE E+ N T+ +K LR
Sbjct: 370 DGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRG 411
>sp|B3R1K1|SYH_CUPTR Histidine--tRNA ligase OS=Cupriavidus taiwanensis (strain R1 / LMG
19424) GN=hisS PE=3 SV=1
Length = 456
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 254/345 (73%), Gaps = 3/345 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+ L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHERPQ GRYRQF
Sbjct: 87 MYSFTDSLNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHERPQRGRYRQF 146
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+G EA+GF GPD+DAE+I+MC RLW +L L + LE+NS+G +ER + LI Y++
Sbjct: 147 HQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTGVRLEINSLGQADERAAHREQLIKYLE 206
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+D +D K LY N LRVLD+KN ++++ NAPKL+D+L ++SL HF G+Q++L
Sbjct: 207 GFQD--ILDDDSKRRLYTNPLRVLDTKNPALQDMAANAPKLIDFLGEESLAHFEGVQRLL 264
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI + K PA G
Sbjct: 265 KANNIPFKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIAQMGGKPAPACG 324
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER+IELI++ + + + CD+Y+VH G+ A +A V +E LR GL V+L+
Sbjct: 325 WAMGIERIIELIREEGVVPD-AVGCDVYLVHQGEAAAQQAMVAAERLRDAGLDVVLHASP 383
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 345
+ SFKSQMKRA+AS A +A IIG++E+ + +K+LR + +
Sbjct: 384 DGKGGSFKSQMKRADASGAAYAVIIGDDEVAAGVVQVKELRQREQ 428
>sp|Q0K963|SYH_CUPNH Histidine--tRNA ligase OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=hisS PE=3 SV=1
Length = 456
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 253/345 (73%), Gaps = 3/345 (0%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+ L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHERPQ GRYRQF
Sbjct: 87 MYSFTDSLNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHERPQRGRYRQF 146
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+G EA+GF GPD+DAE+I+MC RLW +L L + LELNS+G +ER + LI Y++
Sbjct: 147 HQLGAEALGFAGPDVDAEIILMCQRLWDDLGLVGVRLELNSLGQAHERAAHREQLIKYLE 206
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+D +D K LY N LRVLD+KN ++E+ NAPKL+D+L ++SL HF G+Q++L
Sbjct: 207 GFQD--ILDDDSKRRLYTNPLRVLDTKNPALQEMAANAPKLIDFLGEESLAHFEGVQRLL 264
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI + K PA G
Sbjct: 265 KANNIPFKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIAQMGGKPAPACG 324
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
+A+GIER+IELI++ + + + CD+Y+VH G+ A +A + +E LR GL V+L+
Sbjct: 325 WAMGIERIIELIREEGVVPDAAG-CDVYLVHQGEAAAQQAMIAAERLRDAGLDVVLHASP 383
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 345
+ SFKSQMKRA+ S A +A IIG++E+ + +K+LR + +
Sbjct: 384 DGKGGSFKSQMKRADTSGAAYAVIIGDDEVAAGVVQVKELRQREQ 428
>sp|Q82XU9|SYH_NITEU Histidine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718
/ NBRC 14298) GN=hisS PE=3 SV=2
Length = 420
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/345 (54%), Positives = 253/345 (73%), Gaps = 7/345 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F+D LNG+NL+LRPEGTAS +R+VIE+NL+Y GP+RL+YSGPMFRHERPQ GRYRQF
Sbjct: 67 MYTFVDHLNGENLTLRPEGTASCVRAVIEHNLLYAGPQRLYYSGPMFRHERPQKGRYRQF 126
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPDIDAELI+MC+RLW+ L + ++ LE++++G+ R Y LI+Y++
Sbjct: 127 HQVGVEALGFAGPDIDAELIVMCARLWRLLGISDVRLEISTLGSTESRSVYRARLISYLE 186
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
K D ED + L N LR+LDSKN +REIL AP+L D L++DSL HF +Q+IL
Sbjct: 187 KFCDD--LDEDARRRLKTNPLRILDSKNPAMREILAGAPRLFDDLDEDSLAHFEALQRIL 244
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
+IS++IN +LVRG+DYYNRTVFEW TDKLG+Q +IC GGRYD LI + K PA G
Sbjct: 245 RNQDISFEINNRLVRGLDYYNRTVFEWVTDKLGAQGTICAGGRYDGLIAQIGGKPAPACG 304
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FA+GIER++ L+ + N DIY+VH G+ A ++ ++E+LR GLKV+L+
Sbjct: 305 FAMGIERILALMGE-NGAVGAHAIPDIYVVHQGEAAAEFSWKVAESLRDDGLKVVLHSGG 363
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 345
N FK+QMK+A+AS A FAAIIGE+E++ + IK LR E
Sbjct: 364 GN----FKAQMKKADASGARFAAIIGEDEVVAGQISIKPLREAAE 404
>sp|Q0AE43|SYH_NITEC Histidine--tRNA ligase OS=Nitrosomonas eutropha (strain C91)
GN=hisS PE=3 SV=1
Length = 421
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/345 (54%), Positives = 249/345 (72%), Gaps = 6/345 (1%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSFID+LNG+NL+LRPEGTAS +R+VIE+NL+Y GP+RL+YSGPMFRHERPQ GRYRQF
Sbjct: 67 MYSFIDQLNGENLTLRPEGTASCVRAVIEHNLLYSGPQRLYYSGPMFRHERPQKGRYRQF 126
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPDIDAELIIMC+RLW+ L + ++ LE++++G+ R Y LI+Y++
Sbjct: 127 HQVGVEALGFVGPDIDAELIIMCARLWRLLGIPDVRLEISTLGSIESRLIYRARLISYLE 186
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
K D ED + L N LR+LDSKN +REIL AP L D L++DSL HF +Q+IL
Sbjct: 187 KFYDE--LDEDARRRLKTNPLRILDSKNPGMREILEGAPHLFDDLDEDSLIHFDALQRIL 244
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
IS++IN +LVRG+DYYNRTVFEW TDKLG+Q +IC GGRYD LI + K PA G
Sbjct: 245 RNQGISFEINHRLVRGLDYYNRTVFEWVTDKLGAQGTICAGGRYDGLIAQIGGKPAPACG 304
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FA+GIER++ LI + ++ D+Y+VH G A ++ ++E+LR G KV+L+
Sbjct: 305 FAMGIERILSLISETDVAAEIHTVPDVYVVHQGDIAAGFSWKVAESLRDAGFKVVLHSGG 364
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 345
SFK+QMK+A+AS A FAAIIG++E + IK LR E
Sbjct: 365 G----SFKAQMKKADASGARFAAIIGDDEAATGQVSIKSLREAVE 405
>sp|Q5P7B4|SYH_AROAE Histidine--tRNA ligase OS=Aromatoleum aromaticum (strain EbN1)
GN=hisS PE=3 SV=1
Length = 438
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 249/342 (72%), Gaps = 7/342 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF D LNG+ L+LRPEGTAS +R+ I++ ++ G +RL+Y GPMFRHERPQ GRYRQF
Sbjct: 73 MYSFEDALNGEQLTLRPEGTASCVRAAIQHKMLSAGAQRLYYHGPMFRHERPQKGRYRQF 132
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+QIGVEA+GF GPDIDAE I+MC+RLW + L+++ LELNS+G+ +ER ++ +L+ Y++
Sbjct: 133 HQIGVEALGFDGPDIDAEHILMCARLWDDFGLEDVRLELNSLGSSDERARHRAELVAYLE 192
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H++ +D + L+ N LR+LD+KN +++++ NAPKLLD+L +DSL HF G+Q +L
Sbjct: 193 RHRER--LDDDGRRRLHTNPLRILDTKNPELQDLVDNAPKLLDFLGEDSLKHFNGVQVLL 250
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
+ Y+IN +LVRG+DYYNRTVFEW T +LG+Q ++C GGRYD L+++ + PA+G
Sbjct: 251 KDAGVPYRINHRLVRGLDYYNRTVFEWVTTRLGAQGTVCAGGRYDGLVEQLGGRPAPAAG 310
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FA+GIERL+ L ++ + Q D+Y+VH+G++A+ AF +E LR+ G V+++C
Sbjct: 311 FAMGIERLLALWRESGGEAEPA-QPDVYVVHLGEQAQRLAFRAAEALRSHGFAVLMHCGG 369
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
SFKSQMK+A+AS A A +IG++E + +K LR
Sbjct: 370 G----SFKSQMKKADASGAPVAVVIGDDEAATGEVGLKPLRG 407
>sp|Q3SL69|SYH_THIDA Histidine--tRNA ligase OS=Thiobacillus denitrificans (strain ATCC
25259) GN=hisS PE=3 SV=1
Length = 419
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/365 (49%), Positives = 249/365 (68%), Gaps = 13/365 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F+DELNG++L+LRPEGTAS +R+VI++NL+YDG KRLWYSGPMFRHERPQ GRYRQF
Sbjct: 67 MYTFVDELNGESLTLRPEGTASSVRAVIQHNLLYDGGKRLWYSGPMFRHERPQKGRYRQF 126
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVEA+GF GPD+DAELI+MC+ LW+ L + L+LN++G+ R+++ LI Y +
Sbjct: 127 HQVGVEALGFAGPDVDAELIVMCADLWRELGIAP-TLQLNTLGDHGARQRHRSKLIAYYE 185
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
H+D D + L+ N LR+LDSKN ++ + AP+LLD LE ++L+HF +Q +L
Sbjct: 186 AHRDV--LDADAQRRLHSNPLRILDSKNPAMQALNAEAPRLLDELEDEALNHFDALQGLL 243
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
N I+++IN +LVRG+DYYNRTVFEW TD+LG+Q ++C GGRYD L+++ K PA+G
Sbjct: 244 RANGIAFEINPRLVRGLDYYNRTVFEWVTDQLGAQGTVCAGGRYDGLVEQLGGKPAPAAG 303
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FA+GIERL+ L++ D YIVH G A+ A+ + LR GL V+L+C
Sbjct: 304 FAMGIERLLALVETSG-KPIVPAVPDAYIVHAGDTADAFAWQAAATLRGAGLAVVLHCGG 362
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAE 360
SFKSQMK+A+AS A +A IIG+ E + +K LR T +Q + A
Sbjct: 363 G----SFKSQMKKADASRARYAVIIGDEEAAAQQVSVKPLRG-----TAEQTRVELALAI 413
Query: 361 NYFYK 365
Y K
Sbjct: 414 EYLKK 418
>sp|A1K3Z0|SYH_AZOSB Histidine--tRNA ligase OS=Azoarcus sp. (strain BH72) GN=hisS PE=3
SV=1
Length = 433
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/343 (50%), Positives = 237/343 (69%), Gaps = 8/343 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYD-GPKRLWYSGPMFRHERPQYGRYRQ 59
MYSF D LNG++L+LRPEGTAS +R+ I++NL+ GP+RL+Y GPMFRHERPQ GRYRQ
Sbjct: 67 MYSFEDALNGEHLTLRPEGTASCVRAAIQHNLVAGHGPQRLYYHGPMFRHERPQKGRYRQ 126
Query: 60 FYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYI 119
F+QIGVEA+GF GPDIDAE IIMC+RLW +L L+++ LE+NS+G ER ++ LI Y+
Sbjct: 127 FHQIGVEALGFAGPDIDAEHIIMCARLWDDLGLEDVSLEINSLGAAEERAQHRAALIAYL 186
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+D ED + LY N LR+LD+KN ++ ++ AP+L DYL +S HF +Q
Sbjct: 187 EQHRDK--LDEDGQRRLYTNPLRILDTKNPDLQPVVEAAPRLADYLGDESRAHFDAVQLF 244
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L I Y+IN +LVRG+DYYNRTVFEW T +LG+Q ++C GGRYD L+ + K PA+
Sbjct: 245 LKDAGIPYRINHRLVRGLDYYNRTVFEWVTTRLGAQGTVCAGGRYDGLVAQLGGKPQPAA 304
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCV 299
GFA+G+ERL+ L ++ D+Y+VH+G+ A+ AF +E LR G +L+C
Sbjct: 305 GFAMGVERLLALWQESG-GEPERQAPDVYVVHLGEAAQRLAFQAAEALRGHGFSAVLHCG 363
Query: 300 FNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 342
SFKSQMK+A+ S A+ A +IGE+E + +K LR
Sbjct: 364 GG----SFKSQMKKADGSGASIAVVIGEDEAAAGEVGVKPLRG 402
>sp|Q47BR7|SYH_DECAR Histidine--tRNA ligase OS=Dechloromonas aromatica (strain RCB)
GN=hisS PE=3 SV=1
Length = 429
Score = 360 bits (924), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 170/343 (49%), Positives = 234/343 (68%), Gaps = 7/343 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MYSF+D LNG+ L+LRPEGTA +R+VIE+NL +RL+Y G MFRHERPQ GRYRQF
Sbjct: 67 MYSFVDGLNGEALTLRPEGTAGCVRAVIEHNLAARQTQRLYYIGQMFRHERPQKGRYRQF 126
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+Q+GVE+ G GPDIDAE+I+M +RLW +L L I L+LNS+G ER + LI Y +
Sbjct: 127 HQVGVESFGMAGPDIDAEMILMGARLWADLGLDGIELQLNSLGQPEERALHRAALITYFE 186
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+ +++ ED K L+ N LR+LD+KN ++E+ APKL+DYL +SL HF G+Q++L
Sbjct: 187 E--NAELLDEDAKRRLHTNPLRILDTKNPAMQELCAAAPKLIDYLGAESLAHFEGVQRVL 244
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++C GGRYD L+++ K PA G
Sbjct: 245 RDAGVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVCAGGRYDGLVEQLGGKPTPACG 304
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FA+G+ERLI LI++ + D+Y+VH G+ A +AF ++E LR G+ V+ +C
Sbjct: 305 FAMGVERLIALIRESG-GEPAAPAPDVYLVHQGEAAARQAFRVAEGLRDQGINVLQHCGG 363
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 343
SFKSQMK+A+ S A FA IIG++E +K LR +
Sbjct: 364 G----SFKSQMKKADGSGATFAVIIGDDEAATGEAQLKSLRAE 402
>sp|Q2KY92|SYH_BORA1 Histidine--tRNA ligase OS=Bordetella avium (strain 197N) GN=hisS
PE=3 SV=1
Length = 428
Score = 358 bits (918), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 173/341 (50%), Positives = 234/341 (68%), Gaps = 7/341 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D LNG++L++RPE TA V+R+ IE+N++Y+ P R++ GP+FRHERPQ GRYRQF
Sbjct: 70 MYTFTDALNGESLTMRPEMTAGVVRAAIEHNMLYERPHRVYSIGPVFRHERPQRGRYRQF 129
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+QI VEA+GF GPDIDAELI+M RLW L L +I LELNS+G ER + LI Y++
Sbjct: 130 HQIDVEALGFAGPDIDAELIVMLGRLWNTLGLADIRLELNSLGQPAERAAHRAALIEYLE 189
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
KH D ED K LY N LRVLD+KN ++E+ AP+L D+L + S HF G+ + L
Sbjct: 190 KHVD--ILDEDGKRRLYTNPLRVLDTKNPALQEMANAAPRLFDFLGEASRAHFDGVCQRL 247
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
+ I Y +N +LVRG+DYYN TVFEW TD+LGSQ ++CGGGRYD LI+ K PA G
Sbjct: 248 DDAGIGYSLNPRLVRGLDYYNLTVFEWVTDRLGSQGTVCGGGRYDGLIELLGGKPAPAVG 307
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FAIG+ERL++L ++ + +C++Y+VH G+ A+ A + E+LR GL VI++
Sbjct: 308 FAIGVERLLDLWEQ-SAGQQTPPECEVYVVHQGEGAQRLAARVGEDLRDAGLSVIVHAG- 365
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR 341
SFKSQ KRA+AS A A I+G++E+ T +K LR
Sbjct: 366 ---AASFKSQFKRADASGARVAVILGDDEVATKTASVKYLR 403
>sp|Q7W6P7|SYH_BORPA Histidine--tRNA ligase OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=hisS PE=3 SV=2
Length = 428
Score = 357 bits (915), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 245/356 (68%), Gaps = 8/356 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++ GP+FRHERPQ GRYRQF
Sbjct: 70 MYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHERPQRGRYRQF 129
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G ER + LI +++
Sbjct: 130 HQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAAHRAALIEHLE 189
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H+D ED + +Y N LRVLD+KN ++E+ +AP+L D+L ++S HF G+ + L
Sbjct: 190 RHQDI--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEESRSHFDGLCQRL 247
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ K PA G
Sbjct: 248 ADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVELLGGKPAPAVG 307
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FAIG+ERL++L ++ ++ +C++YIVH G+E + A + E LR GL VI++
Sbjct: 308 FAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDAGLDVIVHAGA 366
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTLKQISIS 355
FK+Q KRA+AS A A I+G +E+ + T IK LR D +Q+ ++
Sbjct: 367 AG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQQQVPLA 418
>sp|Q7WHN1|SYH_BORBR Histidine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=hisS PE=3 SV=1
Length = 428
Score = 357 bits (915), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 245/356 (68%), Gaps = 8/356 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++ GP+FRHERPQ GRYRQF
Sbjct: 70 MYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHERPQRGRYRQF 129
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G ER + LI +++
Sbjct: 130 HQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAAHRAALIEHLE 189
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H+D ED + +Y N LRVLD+KN ++E+ +AP+L D+L ++S HF G+ + L
Sbjct: 190 RHQDI--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEESRSHFDGLCQRL 247
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ K PA G
Sbjct: 248 ADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVELLGGKPAPAVG 307
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FAIG+ERL++L ++ ++ +C++YIVH G+E + A + E LR GL VI++
Sbjct: 308 FAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDAGLDVIVHAGA 366
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTLKQISIS 355
FK+Q KRA+AS A A I+G +E+ + T IK LR D +Q+ ++
Sbjct: 367 AG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQQQVPLA 418
>sp|Q7VWL1|SYH_BORPE Histidine--tRNA ligase OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=hisS PE=3 SV=2
Length = 428
Score = 356 bits (914), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 244/356 (68%), Gaps = 8/356 (2%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++ GP+FRHERPQ GRYRQF
Sbjct: 70 MYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHERPQRGRYRQF 129
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G ER + LI +++
Sbjct: 130 HQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAAHRAALIEHLE 189
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
+H+D ED + +Y N LRVLD+KN ++E+ +AP+L D+L + S HF G+ + L
Sbjct: 190 RHQDV--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEASRSHFDGLCQRL 247
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ K PA G
Sbjct: 248 ADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVELLGGKPTPAVG 307
Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
FAIG+ERL++L ++ ++ +C++YIVH G+E + A + E LR GL VI++
Sbjct: 308 FAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDAGLDVIVHAGA 366
Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTLKQISIS 355
FK+Q KRA+AS A A I+G +E+ + T IK LR D +Q+ ++
Sbjct: 367 AG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQQQVPLA 418
>sp|P62373|SYH_PHOPR Histidine--tRNA ligase OS=Photobacterium profundum GN=hisS PE=3
SV=1
Length = 422
Score = 354 bits (908), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 249/363 (68%), Gaps = 12/363 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ I+N L+Y+ +RLWY GPMFR+ERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRYERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+GVE G GPD+DAELI+M +RLW+ L + +++ LELNSIG+ + R Y LI ++
Sbjct: 126 HQVGVEVFGLNGPDVDAELIMMTARLWRELGINQHVRLELNSIGSLDARATYREALIAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H + ED K ++ N LRVLD+KN ++EIL++APKL +YL+ DS HF G+ ++
Sbjct: 186 EQHLEV--LDEDCKRRMHTNPLRVLDTKNPAVQEILVDAPKLSEYLDDDSKAHFAGLCEL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I Y++N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L+++ K PA
Sbjct: 244 LDAAGIEYQVNERLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVEQLGGKATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ + + + D Y+V VG+ + L+E LR GL+V+ +
Sbjct: 304 GFAMGVERLVLLMETLEL-ADVRRSVDAYVVTVGEGTMMAGMKLAEKLRENVPGLRVMNH 362
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFK 357
N FK Q KRA+ A A ++GENEI +NT+++KDLR E T+ Q ++ K
Sbjct: 363 FGGGN----FKKQFKRADNVGAAIALVLGENEIADNTVVVKDLRGG-EQTTMAQDEVTAK 417
Query: 358 DAE 360
AE
Sbjct: 418 LAE 420
>sp|A9MHL6|SYH_SALAR Histidine--tRNA ligase OS=Salmonella arizonae (strain ATCC BAA-731
/ CDC346-86 / RSK2980) GN=hisS PE=3 SV=1
Length = 424
Score = 350 bits (898), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 241/356 (67%), Gaps = 7/356 (1%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCV 299
GFA+G+ERL+ L++ +N S DIY+V G E + A L+E LR V L +
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGTETQSAAMTLAERLRDEMPDVKL--I 361
Query: 300 FNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N+ +FK Q RA+ A A ++GE+E+ N T+++KDLR+ E + Q S++
Sbjct: 362 TNHGGGNFKKQFARADKWGARIALVLGESEVANGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|B5RCZ1|SYH_SALG2 Histidine--tRNA ligase OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=hisS PE=3 SV=1
Length = 424
Score = 350 bits (897), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 243/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ +A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWDARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|O52765|SYH_SALTY Histidine--tRNA ligase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=hisS PE=1 SV=4
Length = 424
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|C0PYN1|SYH_SALPC Histidine--tRNA ligase OS=Salmonella paratyphi C (strain RKS4594)
GN=hisS PE=3 SV=1
Length = 424
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|A9N202|SYH_SALPB Histidine--tRNA ligase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=hisS PE=3 SV=1
Length = 424
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|B4TR94|SYH_SALSV Histidine--tRNA ligase OS=Salmonella schwarzengrund (strain
CVM19633) GN=hisS PE=3 SV=1
Length = 424
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 241/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKN-ICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + + + LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGIADHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|B5F197|SYH_SALA4 Histidine--tRNA ligase OS=Salmonella agona (strain SL483) GN=hisS
PE=3 SV=1
Length = 424
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 241/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKN-ICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + + + LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGIADHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|B5FAX3|SYH_VIBFM Histidine--tRNA ligase OS=Vibrio fischeri (strain MJ11) GN=hisS
PE=3 SV=1
Length = 422
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 245/363 (67%), Gaps = 12/363 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IEN L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+GVE G GPD+DAELI+M +RLW+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQVGVEVFGLNGPDVDAELIMMTARLWRELGIDQHVRLELNSIGSLEARANYRTALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H D ED K ++ N +RVLD+KN ++ IL +APKL +YL+ DS HF G+ ++
Sbjct: 186 EQHLDV--LDEDCKRRMHTNPMRVLDTKNPDVQAILGDAPKLSEYLDDDSKAHFSGLCEL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I Y++N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L+++ K PA
Sbjct: 244 LDAAGIQYQVNERLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVEQLGGKTTPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ + + + D+Y+V G+ + L+E+LR GL+V+
Sbjct: 304 GFAMGLERLVLLMETLELT-DVRRSVDVYMVTAGEGTLMAGMKLAESLREQVPGLRVM-- 360
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFK 357
C F +FK Q KRA+ + A A I+GE E+ T+ +KDLRN E TL Q + K
Sbjct: 361 CHFGG--GNFKKQFKRADNAGAAVALILGETEVAEQTVNVKDLRNG-EQVTLPQSDVFTK 417
Query: 358 DAE 360
AE
Sbjct: 418 LAE 420
>sp|Q5E771|SYH_VIBF1 Histidine--tRNA ligase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=hisS PE=3 SV=1
Length = 422
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 245/363 (67%), Gaps = 12/363 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IEN L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+GVE G GPD+DAELI+M +RLW+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQVGVEVFGLNGPDVDAELIMMTARLWRELGIDQHVRLELNSIGSLEARANYRTALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H D ED K ++ N +RVLD+KN ++ IL +APKL +YL+ DS HF G+ ++
Sbjct: 186 EQHLDV--LDEDCKRRMHTNPMRVLDTKNPDVQAILGDAPKLSEYLDDDSKAHFSGLCEL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I Y++N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L+++ K PA
Sbjct: 244 LDAAGIQYQVNERLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVEQLGGKTTPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ + + + D+Y+V G+ + L+E+LR GL+V+
Sbjct: 304 GFAMGLERLVLLMETLELT-DVRRSVDVYMVTAGEGTLMAGMKLAESLREQVPGLRVM-- 360
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFK 357
C F +FK Q KRA+ + A A I+GE E+ T+ +KDLRN E TL Q + K
Sbjct: 361 CHFGG--GNFKKQFKRADNAGAAVALILGETEVAEQTVNVKDLRNG-EQVTLPQSDVFTK 417
Query: 358 DAE 360
AE
Sbjct: 418 LAE 420
>sp|B4T0P8|SYH_SALNS Histidine--tRNA ligase OS=Salmonella newport (strain SL254) GN=hisS
PE=3 SV=1
Length = 424
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|B5R581|SYH_SALEP Histidine--tRNA ligase OS=Salmonella enteritidis PT4 (strain
P125109) GN=hisS PE=3 SV=1
Length = 424
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|B5FR62|SYH_SALDC Histidine--tRNA ligase OS=Salmonella dublin (strain CT_02021853)
GN=hisS PE=3 SV=1
Length = 424
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|B4TD92|SYH_SALHS Histidine--tRNA ligase OS=Salmonella heidelberg (strain SL476)
GN=hisS PE=3 SV=1
Length = 424
Score = 348 bits (894), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPVLGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
>sp|Q8Z4P4|SYH_SALTI Histidine--tRNA ligase OS=Salmonella typhi GN=hisS PE=3 SV=3
Length = 424
Score = 348 bits (894), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 242/358 (67%), Gaps = 11/358 (3%)
Query: 1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
MY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHERPQ GRYRQF
Sbjct: 67 MYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQF 125
Query: 61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R Y L+ ++
Sbjct: 126 HQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARANYRDALVAFL 185
Query: 120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
++H+++ ED K +Y N LRVLDSKN ++ +L +AP L DYL+ DS +HF G+ K+
Sbjct: 186 EQHQET--LDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPVLGDYLDDDSREHFAGLCKL 243
Query: 180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
L+ I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++ + PA
Sbjct: 244 LDAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAV 303
Query: 240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR--TLGLKVILN 297
GFA+G+ERL+ L++ +N S DIY+V G + + A L+E LR G+K++ N
Sbjct: 304 GFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTN 363
Query: 298 CVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISIS 355
N FK Q RA+ A A ++GE+E+ + T+++KDLR+ E + Q S++
Sbjct: 364 HGGGN----FKKQFARADKWGARIALVLGESEVADGTVVVKDLRSG-EQTAVAQDSVA 416
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,293,235
Number of Sequences: 539616
Number of extensions: 6348923
Number of successful extensions: 20454
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 17245
Number of HSP's gapped (non-prelim): 1209
length of query: 373
length of database: 191,569,459
effective HSP length: 119
effective length of query: 254
effective length of database: 127,355,155
effective search space: 32348209370
effective search space used: 32348209370
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)