BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy17091
         (1250 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|398836196|ref|ZP_10593542.1| ribosome-associated GTPase EngA [Herbaspirillum sp. YR522]
 gi|398213200|gb|EJM99794.1| ribosome-associated GTPase EngA [Herbaspirillum sp. YR522]
          Length = 446

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 265/430 (61%), Positives = 341/430 (79%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GIMHEM KQTKQA++E+D+++FIVDGRQGL   DK IT+FLRK G+P++LV+NK
Sbjct: 61  EPVAKEGIMHEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKCGRPVLLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE +  +S++ DFYELG+G+P++ISA +G+G+ + +E  L +    +    + E      
Sbjct: 121 SEGMKYTSVTADFYELGMGDPYVISAAHGDGVADLVEEALNV---VEANRPEAEPEPEGQ 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +  IK+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+  FE + ++Y LIDTAG
Sbjct: 178 VRGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFERDGQQYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V 
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLQSISDANVVLLLLDAQQDISEQDAHIAGFILESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  +QR  IKN+I +KLNFLSFA  +F+SA+K + I   M+SIN  Y ++  +L
Sbjct: 298 VNKWDGLQSDQRDAIKNDIDRKLNFLSFANTHFVSALKNSGIGPVMKSINSAYAAATANL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST R+TRAL  A+++  P RK  IRPKLRYAHQGG+NPP++VIHGN L  I ++YKRYLE
Sbjct: 358 STPRLTRALEQAVEHQQPPRKGSIRPKLRYAHQGGQNPPVVVIHGNALDAINDNYKRYLE 417

Query: 420 KYFYRTFSLI 429
           K+F  TFSL+
Sbjct: 418 KHFRETFSLV 427


>gi|300312253|ref|YP_003776345.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
 gi|300075038|gb|ADJ64437.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
          Length = 447

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 262/430 (60%), Positives = 338/430 (78%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GIM+EM KQTKQA++E+D+++FIVDGRQGL   DK IT+FLRK G+P++LV+NK
Sbjct: 61  EPVAKDGIMYEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKCGRPVLLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE +  +S++ DFYELG+G+P++ISA +G+G+ + +   L +    +    + E T +  
Sbjct: 121 SEGMKYTSVTADFYELGMGDPYVISAAHGDGVADLVTEALDVAEAQRTPEPEPEETAVRG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+  FE   + Y LIDTAG
Sbjct: 181 T---KIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFEREGRHYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K FE IEKFSV+KTLKSI +ANVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V 
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLKSISDANVVLLLLDAQQDISEQDAHIAGFVLESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  +QR  IK ++++KLNFLSFA F+FISA+K   I   M+SI+  Y +++  L
Sbjct: 298 VNKWDGMESDQRNQIKMDLERKLNFLSFAKFHFISALKSTGIGPLMKSIDSAYAAAMAKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST R+TRAL  A+++  P RK  IRPKLRYAHQGG+NPP++VIHGN L+ I ++YKRYLE
Sbjct: 358 STPRLTRALEEALEHQQPRRKGSIRPKLRYAHQGGQNPPVVVIHGNALEAIDDNYKRYLE 417

Query: 420 KYFYRTFSLI 429
           K+F  TFSL+
Sbjct: 418 KHFRETFSLV 427


>gi|340787109|ref|YP_004752574.1| GTP-binding protein [Collimonas fungivorans Ter331]
 gi|340552376|gb|AEK61751.1| GTP-binding protein [Collimonas fungivorans Ter331]
          Length = 447

 Score =  560 bits (1444), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 265/430 (61%), Positives = 339/430 (78%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GIMHEM KQTKQA+ E+DI+IFIVDGRQGL   DK IT+FLRKSG+ ++LV+NK
Sbjct: 61  EPVAKDGIMHEMAKQTKQAVAEADIVIFIVDGRQGLTPHDKTITDFLRKSGRSVMLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE +  +S++ +FYELG+G+P++ISA +G+G+ + +E  L +    +     +E      
Sbjct: 121 SEGMKYTSVTAEFYELGMGDPYVISAAHGDGVTDLVEESLDLAFSQRP---SEEPEPEDK 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+  FE + KKY LIDTAG
Sbjct: 178 ERGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFERDGKKYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K FE IEKFSV+KTL+SI EANVV+LLLDAQQ+IS QD +IA F+ E+GR+L+V 
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFVLETGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  ++R  IK ++ +KLNFLSFA F+FISA+K   I   M+SI+  Y +++ +L
Sbjct: 298 VNKWDGLTSDRRDEIKMDMDRKLNFLSFAKFHFISALKSTGITPLMKSIDSAYAAAMSNL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T ++TRALI A+++  P RK  IRPKLRYAHQGG NPPI+VIHGN L+ I ++YKRYLE
Sbjct: 358 TTPKLTRALIEAVEHQQPRRKGSIRPKLRYAHQGGMNPPIVVIHGNALESIEDNYKRYLE 417

Query: 420 KYFYRTFSLI 429
           K+F  TFSL+
Sbjct: 418 KHFRETFSLV 427


>gi|152981185|ref|YP_001353813.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille]
 gi|166198722|sp|A6SZW6.1|DER_JANMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|151281262|gb|ABR89672.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille]
          Length = 447

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 261/430 (60%), Positives = 342/430 (79%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1   MKPVIALIGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GIMHEM KQTKQA+ E+D++IFIVDGRQGL   DK IT+FLRKSG+ ++LV+NK
Sbjct: 61  EPVAKEGIMHEMAKQTKQAVAEADVVIFIVDGRQGLTPHDKTITDFLRKSGRSVMLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P++ISA +G+G+ + +E  L I    +   ++   +N  S
Sbjct: 121 AEGMKYTTVTADFYELGMGDPYVISAAHGDGVNDLVEEALNIAFAQRPPEEEAPASNDRS 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           I   K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+  FE + K Y LIDTAG
Sbjct: 181 I---KLAIVGRPNVGKSTLVNTLLGEERVIAFDLPGTTRDSIEIPFERDGKHYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K FE IEKFSV+KTL+SI EANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V 
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFILESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  ++R  IK ++++KL+FLSFA  +F+SA+K + I   M+S++  Y +++ +L
Sbjct: 298 VNKWDGLTSDRRDEIKMDLERKLSFLSFAKTHFVSALKSSGIGPMMKSVDGAYAAAMSNL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TRALI A+++  P RK  IRPKLRYAHQGG NPPI+VIHGN L+ I  +YKR+LE
Sbjct: 358 STPKLTRALIEAVEHQQPRRKGSIRPKLRYAHQGGMNPPIVVIHGNALEAIDANYKRFLE 417

Query: 420 KYFYRTFSLI 429
           K+F  TFSL+
Sbjct: 418 KHFRETFSLV 427


>gi|399018047|ref|ZP_10720233.1| ribosome-associated GTPase EngA [Herbaspirillum sp. CF444]
 gi|398102012|gb|EJL92204.1| ribosome-associated GTPase EngA [Herbaspirillum sp. CF444]
          Length = 447

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 257/430 (59%), Positives = 342/430 (79%), Gaps = 5/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GIM+EM KQTKQA++E+D+++FIVDGRQGL   DK IT+FLRKSG+ ++LV+NK
Sbjct: 61  EPVAKEGIMYEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKSGRSVMLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +S++ DFYELG+G+P++ISA +G+G+ + ++  L I +  +    ++    +  
Sbjct: 121 AEGMKYTSVTADFYELGLGDPYVISAAHGDGVADLVDEALDIAVAQRPDLGEE----VDV 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+  FE + K+Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFERDGKQYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K FE IEKFSV+KTL+SI E NVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V 
Sbjct: 237 IRRRGKVFEAIEKFSVVKTLQSISETNVVLLLLDAQQDISEQDAHIAGFVLESGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  ++R  IK ++++KL+FLSFA F+FISA+K   I   M+SI+  Y +++ +L
Sbjct: 297 VNKWDGLQSDRRDEIKMDLERKLSFLSFAKFHFISALKSTGIGPLMKSIDSAYAAAMSNL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T ++TRALI A+++  P RK  IRPKLRYAHQGG NPP++VIHGN L+ + + YKRYLE
Sbjct: 357 TTPKLTRALIEAVEHQQPRRKGSIRPKLRYAHQGGMNPPVVVIHGNALEGVDDSYKRYLE 416

Query: 420 KYFYRTFSLI 429
           K+F  TFSL+
Sbjct: 417 KHFRETFSLV 426


>gi|409406674|ref|ZP_11255136.1| GTP-binding protein [Herbaspirillum sp. GW103]
 gi|386435223|gb|EIJ48048.1| GTP-binding protein [Herbaspirillum sp. GW103]
          Length = 447

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 263/431 (61%), Positives = 340/431 (78%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG+G +G++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGQGRVGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GIM+EM KQTKQA++E+DI++FIVDGRQGL   DK IT+FLRK G+ ++LV+NK
Sbjct: 61  EPVAKDGIMYEMAKQTKQAVVEADIVVFIVDGRQGLTPHDKTITDFLRKCGRSVLLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           SE +  +S++ DFYELG+G+P++ISA +G+G+ + +E  L  IE    +  + +E     
Sbjct: 121 SEGMKYTSVTADFYELGMGDPYVISAAHGDGVADLVEEALDQIEAQRAQEPEAEE----P 176

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           ++   K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+  FE   + Y LIDTA
Sbjct: 177 AMRGTKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFEREGRHYTLIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           GIRRR K FE IEKFSV+KTLKSI +ANVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V
Sbjct: 237 GIRRRGKVFEAIEKFSVVKTLKSISDANVVLLLLDAQQDISEQDAHIAGFVLESGRALVV 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  +QR  IK ++++KLNFLSFA F+FISA+K   I   M+SI+  Y +++  
Sbjct: 297 GVNKWDGMESDQRNQIKMDLERKLNFLSFAKFHFISALKSTGIGPLMKSIDSAYAAAMAK 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           LST R+TRAL  A+++  P RK  IRPKLRYAHQGG+NPP++VIHGN L+ I ++YKRYL
Sbjct: 357 LSTPRLTRALEEALEHQQPRRKGSIRPKLRYAHQGGQNPPVVVIHGNALEAIDDNYKRYL 416

Query: 419 EKYFYRTFSLI 429
           EK+F  TFSL+
Sbjct: 417 EKHFRETFSLV 427


>gi|445498326|ref|ZP_21465181.1| GTP-binding protein EngA [Janthinobacterium sp. HH01]
 gi|444788321|gb|ELX09869.1| GTP-binding protein EngA [Janthinobacterium sp. HH01]
          Length = 448

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 254/431 (58%), Positives = 334/431 (77%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GIMHEM KQTKQA+ E+DI++F+VDGRQGL   DK IT+FLRKSG+P++LV+NK
Sbjct: 61  EPVAKEGIMHEMAKQTKQAVAEADIVVFLVDGRQGLTPHDKTITDFLRKSGRPVMLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE +  +++  DFYELG+G P+ IS+ +G+G+ + ++  L +    +     ++   +  
Sbjct: 121 SEGMRYTAVVADFYELGLGEPYSISSAHGDGVADLVDEALDLAFAQRP----EDAAELEK 176

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            ++ IK+A+VG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI+  FE + K+Y LIDTA
Sbjct: 177 TDHGIKIALVGRPNVGKSTLINTLVGEERVIAFDMPGTTRDSIEIPFERDGKQYTLIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           GIRRR K FE IEKFSV+KTL+SI EANVV+L+LDAQQ+IS QD +IA F+ E+GR+L++
Sbjct: 237 GIRRRGKVFEAIEKFSVVKTLQSISEANVVVLMLDAQQDISEQDAHIAGFVLETGRALVI 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  ++R  IK +I +KL+FL FA  +FISA+K   I   M+S++  Y ++   
Sbjct: 297 AVNKWDGLRTDERDEIKIDIDRKLDFLGFAKMHFISALKAQGIGPLMKSLDQAYAAAFAD 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           LST ++TRALI A++   P RK  IRPKLRYAHQGG NPP+IVIHGN L  +G  YKRYL
Sbjct: 357 LSTPKLTRALIEAVEKQEPRRKGSIRPKLRYAHQGGMNPPVIVIHGNALDAVGEPYKRYL 416

Query: 419 EKYFYRTFSLI 429
           EK+F  TF+L+
Sbjct: 417 EKHFRDTFNLV 427


>gi|134094495|ref|YP_001099570.1| GTP-binding protein EngA [Herminiimonas arsenicoxydans]
 gi|166198721|sp|A4G4K6.1|DER_HERAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|133738398|emb|CAL61443.1| GTP-binding protein EngA [Herminiimonas arsenicoxydans]
          Length = 447

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 260/430 (60%), Positives = 336/430 (78%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRMGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GIMHEM KQTKQA+ E+D++IFIVDGRQGL   DK IT+FLRKSG+ ++LV+NK
Sbjct: 61  EPVAKEGIMHEMAKQTKQAVAEADVVIFIVDGRQGLTPHDKTITDFLRKSGRSVMLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  + ++ DFYELG+G+P++ISA +G+G+ + +E  L I    +     +E      
Sbjct: 121 AEGMKYTMVTADFYELGLGDPYVISAAHGDGVSDLVEESLDIAFAQRP---PEEEVPESK 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+  FE   K Y LIDTAG
Sbjct: 178 DRSIRLAIVGRPNVGKSTLVNTLLGEERVIAFDLPGTTRDSIEIPFEREGKLYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K FE IEKFSV+KTL+SI EANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V 
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFILESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  ++R  IK ++++KL FLSFA  +F+SA+K + I   M+S+++ Y +++ +L
Sbjct: 298 VNKWDGLTSDRRDEIKIDLERKLGFLSFAKTHFVSALKSSGIGPMMKSVDNAYAAAMSNL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TRALI A+++  P RK  IRPKLRYAHQGG NPPI+VIHGN L  I  +YKR+LE
Sbjct: 358 STPKLTRALIEAVEHQQPRRKGSIRPKLRYAHQGGMNPPIVVIHGNALDAIDANYKRFLE 417

Query: 420 KYFYRTFSLI 429
           K+F  TFSL+
Sbjct: 418 KHFRETFSLV 427


>gi|395763286|ref|ZP_10443955.1| GTP-binding protein Der [Janthinobacterium lividum PAMC 25724]
          Length = 448

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 258/431 (59%), Positives = 336/431 (77%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GIMH+M  QTKQA+ E+D+++FIVDGRQGL   DK I +FLRKSG+P++LV+NK
Sbjct: 61  EPVAKEGIMHQMALQTKQAVAEADVVVFIVDGRQGLTPHDKTIVDFLRKSGRPVLLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE +  +++  +FYELG+G+P+ IS+ +G+G+ + +E +L +    +      E   +  
Sbjct: 121 SEGMRYTAVVSEFYELGMGDPYAISSAHGDGVNDLVEVMLDLAFAQRP----DEPEELEK 176

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  IK+A+VG+PNVGKSTLIN+LLGE RVI +D PGTTRDSI+  FE + ++Y LIDTA
Sbjct: 177 TDRGIKIALVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDSIEIPFERDGQQYTLIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           GIRRR K FE IEKFSV+KTL+SI EANVV+L+LDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 237 GIRRRGKVFEAIEKFSVVKTLQSISEANVVVLMLDAQQDISEQDAHIAGFILESGRALVV 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  ++R  IK +I +KL+FLSFA  +FISA+K  NI   M+S+N  Y +++  
Sbjct: 297 AVNKWDGLQSHERDEIKIDIDRKLDFLSFAQMHFISALKGTNIAPLMKSLNAAYAAAMCD 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           LST ++TRALI A++   P RK  IRPKLRYAHQGG NPP+IVIHGN L  +G+ YKRYL
Sbjct: 357 LSTPKLTRALIEAVEKQEPRRKGSIRPKLRYAHQGGMNPPVIVIHGNALDAVGDPYKRYL 416

Query: 419 EKYFYRTFSLI 429
           EK+F  TF+L+
Sbjct: 417 EKHFRDTFALV 427


>gi|427401453|ref|ZP_18892525.1| GTPase Der [Massilia timonae CCUG 45783]
 gi|425719562|gb|EKU82494.1| GTPase Der [Massilia timonae CCUG 45783]
          Length = 445

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 254/431 (58%), Positives = 333/431 (77%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG IG++ F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRIGERPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GIMHEM  QT+QA+ E+D+++FIVDGRQGL   DK IT++LRKSG+ ++LV+NK
Sbjct: 61  EPVAKEGIMHEMALQTRQAVAEADVVVFIVDGRQGLTPHDKTITDYLRKSGRKVMLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE +  +S++ DFYELG+G+P++ISA +G+G+ + +   L I    +      E   +  
Sbjct: 121 SEGMKYTSVTADFYELGMGDPYVISAAHGDGVHDLVNEALDIAFAQRP----DEPEELEP 176

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            ++  K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  FE + KKY LIDTA
Sbjct: 177 ADHGFKIAIVGRPNVGKSTLINTLVGEQRVIAFDMPGTTRDAIEVPFERDGKKYTLIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           GIRRR K FE IEKFSV+KT++SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 237 GIRRRGKIFEAIEKFSVVKTMQSISDANVVILLLDAQQDISEQDAHIAGFILESGRALVV 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  +QR  +KN++ +KL+FL FA  +F+SA++   I+  ++S+   Y ++  +
Sbjct: 297 AVNKWDGLQTDQRDQVKNDLDRKLDFLGFAKTHFVSALRGTGISQLLKSVESAYAAATAN 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           LST R+TRAL  A++   P RK   RPK+RYAHQGG+NPPIIVIHGN L+ I   YKRYL
Sbjct: 357 LSTPRLTRALQEAVEKQEPKRKGTSRPKMRYAHQGGQNPPIIVIHGNALEGITEPYKRYL 416

Query: 419 EKYFYRTFSLI 429
           EK+F  TF+L+
Sbjct: 417 EKHFRDTFNLV 427


>gi|237747713|ref|ZP_04578193.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
 gi|229379075|gb|EEO29166.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
          Length = 446

 Score =  537 bits (1384), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 250/431 (58%), Positives = 338/431 (78%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SR ALVA+YPGLTRDRHYGEG +G + F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRAALVADYPGLTRDRHYGEGRMGDRPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK+G+M EM KQTKQA+ E+D++IFIVDGRQG+   DK IT++LRKSG+P++L +NK
Sbjct: 61  EPVVKEGVMQEMAKQTKQAVAEADVVIFIVDGRQGITPHDKAITDYLRKSGRPVILAVNK 120

Query: 121 SENIN-SSISLDFYELGIG-NPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           +E +  +++  DFYELG+G +P +IS+ +G+G+   L+  L + +P      + E  +  
Sbjct: 121 AEGMKYTAVVADFYELGLGSDPLVISSAHGDGVHTLLDEALKM-VPLSPAETEDEIES-- 177

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             ++IK+AIVG+PNVGKST+IN+LLGE RVI +D PGTTRD+I+  FE + K+Y L+DTA
Sbjct: 178 GQKHIKLAIVGRPNVGKSTMINALLGEERVIAFDLPGTTRDAIEIPFERDGKQYTLVDTA 237

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+R+R K F+ IEKFSV+KTL++I EANVV+LL+DAQQ+IS QD +IA F+ ESGR+L+V
Sbjct: 238 GLRKRGKVFQAIEKFSVVKTLQAISEANVVLLLMDAQQDISEQDAHIAGFVLESGRALVV 297

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +  ++RK IK+ +++KL+FLSFA F+++SA+K   I++ M SI+  Y +++  
Sbjct: 298 GINKWDGLDQDKRKEIKSEVERKLHFLSFAKFHYVSALKSTGISALMRSIDSAYAAAMAK 357

Query: 359 LSTSRITRALISAIKNHPPCRKK-LIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
           LST R+TR L  A+++  P RK+   RPKLRYAHQGG+NPPIIVIHGN L  I +DYKRY
Sbjct: 358 LSTPRLTRVLEEAVEHQQPPRKQGGTRPKLRYAHQGGQNPPIIVIHGNSLDAISDDYKRY 417

Query: 418 LEKYFYRTFSL 428
           LEK+F   FSL
Sbjct: 418 LEKHFRDAFSL 428


>gi|237745515|ref|ZP_04575995.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS]
 gi|229376866|gb|EEO26957.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS]
          Length = 445

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 246/430 (57%), Positives = 336/430 (78%), Gaps = 5/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SR ALVA+YPGLTRDRHYGEG +G + F++IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRAALVADYPGLTRDRHYGEGRMGDRPFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK+G++ EM KQTKQA+ ESD+++F+VDGRQG+   DK IT++LRK G+P++LV+NK
Sbjct: 61  EPVVKEGVLQEMAKQTKQAVAESDVVVFMVDGRQGITPHDKAITDYLRKCGRPVILVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +++  DFYELG+G+P +IS+ +G+G+   LE  L  ++PY     + E      
Sbjct: 121 AEGMKYTAVVADFYELGLGDPLVISSAHGDGVHTLLEEALG-KVPYAP--AETEDGIAGE 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++A+VG+PNVGKST+IN+LLGE RVI +D PGTTRD+I+  FE + K Y L+DTAG
Sbjct: 178 QRPVRLAVVGRPNVGKSTMINALLGEERVIAFDLPGTTRDAIEIPFERDGKHYTLVDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K F+ IEKFSV+KTL++I EANVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V 
Sbjct: 238 LRKRGKVFQAIEKFSVVKTLQAISEANVVLLLLDAQQDISEQDAHIAGFVLESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  ++R+ +K  +++KL+FLSFA F+++SA+K   I + M S++  Y +++  L
Sbjct: 298 INKWDGLPPDKRREVKAEVERKLHFLSFAKFHYVSALKATGIGALMRSVDAAYAAAMAKL 357

Query: 360 STSRITRALISAIKNH-PPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           ST R+TR L  A+++  PP R+  IRPKLRYAHQGG+NPPIIVIHGN L+ +G+DYKRYL
Sbjct: 358 STPRLTRVLEEAVEHQAPPRRQGSIRPKLRYAHQGGQNPPIIVIHGNSLENVGDDYKRYL 417

Query: 419 EKYFYRTFSL 428
           EK+F   FSL
Sbjct: 418 EKHFRDAFSL 427


>gi|254252261|ref|ZP_04945579.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
 gi|124894870|gb|EAY68750.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
          Length = 445

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/429 (57%), Positives = 323/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E  +   
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAD--QPEEEDDNDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGVKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDEHARERAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|221198076|ref|ZP_03571122.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M]
 gi|221204366|ref|ZP_03577383.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2]
 gi|221212773|ref|ZP_03585749.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1]
 gi|421470062|ref|ZP_15918471.1| ribosome-associated GTPase EngA [Burkholderia multivorans ATCC
           BAA-247]
 gi|421478068|ref|ZP_15925839.1| ribosome-associated GTPase EngA [Burkholderia multivorans CF2]
 gi|221166986|gb|EED99456.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1]
 gi|221175223|gb|EEE07653.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2]
 gi|221182008|gb|EEE14409.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M]
 gi|400225314|gb|EJO55489.1| ribosome-associated GTPase EngA [Burkholderia multivorans CF2]
 gi|400228569|gb|EJO58494.1| ribosome-associated GTPase EngA [Burkholderia multivorans ATCC
           BAA-247]
          Length = 445

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 323/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E  +   
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAD--QPEEEDDNDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDEHARERAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|107029013|ref|YP_626108.1| GTP-binding protein EngA [Burkholderia cenocepacia AU 1054]
 gi|116689829|ref|YP_835452.1| GTP-binding protein EngA [Burkholderia cenocepacia HI2424]
 gi|170733168|ref|YP_001765115.1| GTP-binding protein EngA [Burkholderia cenocepacia MC0-3]
 gi|123370031|sp|Q1BGX0.1|DER_BURCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166224312|sp|A0K7T2.1|DER_BURCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|238688579|sp|B1JT88.1|DER_BURCC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|105898177|gb|ABF81135.1| Small GTP-binding protein domain protein [Burkholderia cenocepacia
           AU 1054]
 gi|116647918|gb|ABK08559.1| small GTP-binding protein [Burkholderia cenocepacia HI2424]
 gi|169816410|gb|ACA90993.1| small GTP-binding protein [Burkholderia cenocepacia MC0-3]
          Length = 445

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|161723167|ref|YP_442759.2| GTP-binding protein EngA [Burkholderia thailandensis E264]
 gi|167581710|ref|ZP_02374584.1| GTP-binding protein EngA [Burkholderia thailandensis TXDOH]
 gi|167619826|ref|ZP_02388457.1| GTP-binding protein EngA [Burkholderia thailandensis Bt4]
 gi|257138969|ref|ZP_05587231.1| GTP-binding protein EngA [Burkholderia thailandensis E264]
          Length = 445

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 324/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K+Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|254248074|ref|ZP_04941395.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
 gi|124872850|gb|EAY64566.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
          Length = 445

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++I+DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLIVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|416938396|ref|ZP_11934270.1| GTP-binding protein Der [Burkholderia sp. TJI49]
 gi|325524779|gb|EGD02753.1| GTP-binding protein Der [Burkholderia sp. TJI49]
          Length = 445

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 323/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKTIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAD--QPEEEDENDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDEHARERAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|83652896|gb|ABC36959.1| GTPase family protein [Burkholderia thailandensis E264]
          Length = 460

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 324/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 16  MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 75

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 76  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 135

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +
Sbjct: 136 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 191

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K+Y LIDTAG
Sbjct: 192 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAG 251

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V 
Sbjct: 252 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 311

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L
Sbjct: 312 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 371

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 372 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 431

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 432 NRFRETFSL 440


>gi|415943453|ref|ZP_11556062.1| GTP-binding protein [Herbaspirillum frisingense GSF30]
 gi|407758693|gb|EKF68483.1| GTP-binding protein [Herbaspirillum frisingense GSF30]
          Length = 430

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/414 (59%), Positives = 324/414 (78%), Gaps = 6/414 (1%)

Query: 18  LFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEMTKQTK 77
           +FNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGFEP  K GIM+EM KQTK
Sbjct: 1   MFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGFEPVAKDGIMYEMAKQTK 60

Query: 78  QAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLDFYELG 136
           QA++E+D+++FIVDGRQGL   DK IT+FLRK G+ ++LV+NKSE +  +S++ DFYELG
Sbjct: 61  QAVVEADVVVFIVDGRQGLTPHDKTITDFLRKCGRSVMLVVNKSEGMKYTSVTADFYELG 120

Query: 137 IGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGK 195
           +G+P++ISA +G+G+ + +E  L  IE    +  + +E     ++   K+AIVG+PNVGK
Sbjct: 121 MGDPYVISAAHGDGVADLVEEALDQIEAQRAQEPEPEE----AAVRGTKIAIVGRPNVGK 176

Query: 196 STLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSV 255
           STL+N+LLGE RVI +D PGTTRDSI+  FE   + Y LIDTAGIRRR K FE IEKFSV
Sbjct: 177 STLVNTLLGEERVIAFDMPGTTRDSIEIPFEREGRHYTLIDTAGIRRRGKVFEAIEKFSV 236

Query: 256 IKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIK 315
           +KTLKSI +ANVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V VNKWD +  +QR  IK
Sbjct: 237 VKTLKSISDANVVLLLLDAQQDISEQDAHIAGFVLESGRALVVGVNKWDGMQSDQRDQIK 296

Query: 316 NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNH 375
            ++++KLNFLSFA F+FISA+K   I   M+SI+  Y +++  LST R+TRAL  A+++ 
Sbjct: 297 MDLERKLNFLSFAKFHFISALKSTGIGPLMKSIDSAYAAAMAKLSTPRLTRALEEALEHQ 356

Query: 376 PPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            P RK  IRPKLRYAHQGG+NPP++VIHGN L+ I ++YKRYLEK+F  TFSL+
Sbjct: 357 QPRRKGSIRPKLRYAHQGGQNPPVVVIHGNALEAIDDNYKRYLEKHFRETFSLV 410



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 36/177 (20%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRD----------RHYGEGYIGKKSFII 54
           + +VGRPNVGKSTL N L      +  + PG TRD          RHY           +
Sbjct: 166 IAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFEREGRHY----------TL 215

Query: 55  IDTGGFEPEVKKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK 109
           IDT G     ++G + E  +     +T ++I ++++++ ++D +Q + EQD  I  F+ +
Sbjct: 216 IDTAGIR---RRGKVFEAIEKFSVVKTLKSISDANVVLLLLDAQQDISEQDAHIAGFVLE 272

Query: 110 SGQPIVLVINKSENINS----SISLDFYE----LGIGNPHIISALYGNGIKNFLENI 158
           SG+ +V+ +NK + + S     I +D       L     H ISAL   GI   +++I
Sbjct: 273 SGRALVVGVNKWDGMQSDQRDQIKMDLERKLNFLSFAKFHFISALKSTGIGPLMKSI 329


>gi|444371762|ref|ZP_21171295.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443594661|gb|ELT63296.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia
           K56-2Valvano]
          Length = 445

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEAEEDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMSKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|393778490|ref|ZP_10366763.1| EngA protein [Ralstonia sp. PBA]
 gi|392714528|gb|EIZ02129.1| EngA protein [Ralstonia sp. PBA]
          Length = 447

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 244/429 (56%), Positives = 324/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG IG++ FI+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRIGERPFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GIM EM KQT+QA++E+D ++FIVDGR GL  QD++I ++LRK+G+ ++LV+NK
Sbjct: 61  EPVAKDGIMAEMAKQTRQAVVEADTVVFIVDGRLGLAPQDRVIADYLRKTGRQVMLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  SS++ DFYELG+G+P +ISA +G+G+   ++  + + +  K    ++       
Sbjct: 121 AEGMKYSSVTADFYELGLGDPLVISAAHGDGVAELVDEAIDLAIQQKPELAEEPDDGTQG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           I   K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRD+I   FE   K Y LIDTAG
Sbjct: 181 I---KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDAIYVPFERGGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDA+Q++S QD +IA FI ESGR+L+V 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDARQDVSEQDAHIAGFIVESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK ++++KL FLSFA F+FISA++   I   M+SI+  Y ++++ L
Sbjct: 298 VNKWDGLDGHTRDRIKADMERKLKFLSFANFHFISAVERTGIGPLMKSIDAAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST R+TR ++ A++   P R  + RPKLRYAHQGG NPPII+IHGN L  I + YKRYLE
Sbjct: 358 STPRLTRVMMEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIIIIHGNALSAIPDTYKRYLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 GRFRAAFQL 426


>gi|444357828|ref|ZP_21159312.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia BC7]
 gi|443605518|gb|ELT73366.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia BC7]
          Length = 445

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEAEEDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDDHARDHAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMSKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|167836401|ref|ZP_02463284.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
          Length = 445

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/429 (57%), Positives = 323/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K+Y LIDTAG
Sbjct: 177 ARGTKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLARKLKFLDFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|206560243|ref|YP_002231007.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315]
 gi|238693091|sp|B4EAW5.1|DER_BURCJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|198036284|emb|CAR52180.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315]
          Length = 445

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 321/429 (74%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEAEEDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD    + R   K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGFDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMSKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|78066578|ref|YP_369347.1| GTP-binding protein EngA [Burkholderia sp. 383]
 gi|123728977|sp|Q39FR3.1|DER_BURS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|77967323|gb|ABB08703.1| Small GTP-binding protein [Burkholderia sp. 383]
          Length = 445

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 245/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  ++ISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDEHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPP+IVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|172060768|ref|YP_001808420.1| GTP-binding protein EngA [Burkholderia ambifaria MC40-6]
 gi|238689149|sp|B1YR40.1|DER_BURA4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|171993285|gb|ACB64204.1| small GTP-binding protein [Burkholderia ambifaria MC40-6]
          Length = 445

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 244/429 (56%), Positives = 324/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+H+M +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E  +   
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADDDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  ++ISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPP+IVIHGN L  + + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTDTYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|161524640|ref|YP_001579652.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616]
 gi|189350604|ref|YP_001946232.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616]
 gi|238687037|sp|A9AH00.1|DER_BURM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|160342069|gb|ABX15155.1| small GTP-binding protein [Burkholderia multivorans ATCC 17616]
 gi|189334626|dbj|BAG43696.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
          Length = 445

 Score =  525 bits (1351), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E  +   
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAD--QPEEEDDNDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR  K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRSGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDEHARERAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|402566392|ref|YP_006615737.1| GTP-binding protein EngA [Burkholderia cepacia GG4]
 gi|402247589|gb|AFQ48043.1| GTP-binding protein EngA [Burkholderia cepacia GG4]
          Length = 445

 Score =  525 bits (1351), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 245/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  ++ISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPP+IVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|134295839|ref|YP_001119574.1| GTP-binding protein EngA [Burkholderia vietnamiensis G4]
 gi|166224317|sp|A4JEN6.1|DER_BURVG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|134138996|gb|ABO54739.1| small GTP-binding protein [Burkholderia vietnamiensis G4]
          Length = 445

 Score =  525 bits (1351), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 245/429 (57%), Positives = 323/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E  +   
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADDNDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  ++ISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPP+IVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|53719151|ref|YP_108137.1| GTP-binding protein EngA [Burkholderia pseudomallei K96243]
 gi|124383522|ref|YP_001026075.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10229]
 gi|126439512|ref|YP_001059220.1| GTP-binding protein EngA [Burkholderia pseudomallei 668]
 gi|126449445|ref|YP_001080656.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10247]
 gi|126454834|ref|YP_001066487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1106a]
 gi|161579520|ref|YP_103001.2| GTP-binding protein EngA [Burkholderia mallei ATCC 23344]
 gi|162210023|ref|YP_333745.2| GTP-binding protein EngA [Burkholderia pseudomallei 1710b]
 gi|167719273|ref|ZP_02402509.1| GTP-binding protein EngA [Burkholderia pseudomallei DM98]
 gi|167738270|ref|ZP_02411044.1| GTP-binding protein EngA [Burkholderia pseudomallei 14]
 gi|167815459|ref|ZP_02447139.1| GTP-binding protein EngA [Burkholderia pseudomallei 91]
 gi|167823871|ref|ZP_02455342.1| GTP-binding protein EngA [Burkholderia pseudomallei 9]
 gi|167845410|ref|ZP_02470918.1| GTP-binding protein EngA [Burkholderia pseudomallei B7210]
 gi|167902402|ref|ZP_02489607.1| GTP-binding protein EngA [Burkholderia pseudomallei NCTC 13177]
 gi|167910644|ref|ZP_02497735.1| GTP-binding protein EngA [Burkholderia pseudomallei 112]
 gi|167918673|ref|ZP_02505764.1| GTP-binding protein EngA [Burkholderia pseudomallei BCC215]
 gi|254177966|ref|ZP_04884621.1| GTPase family protein [Burkholderia mallei ATCC 10399]
 gi|254189054|ref|ZP_04895565.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237]
 gi|254259698|ref|ZP_04950752.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a]
 gi|254297432|ref|ZP_04964885.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e]
 gi|254358306|ref|ZP_04974579.1| GTP-binding protein EngA [Burkholderia mallei 2002721280]
 gi|81824774|sp|Q63US9.1|DER_BURPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166224313|sp|A3MK70.1|DER_BURM7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166224314|sp|A2S2A6.1|DER_BURM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166224315|sp|A3NVW6.1|DER_BURP0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166224316|sp|A3NA49.1|DER_BURP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|52209565|emb|CAH35518.1| putative GTPase [Burkholderia pseudomallei K96243]
 gi|124291542|gb|ABN00811.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10229]
 gi|126219005|gb|ABN82511.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 668]
 gi|126228476|gb|ABN92016.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106a]
 gi|126242315|gb|ABO05408.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10247]
 gi|148027433|gb|EDK85454.1| GTP-binding protein EngA [Burkholderia mallei 2002721280]
 gi|157808014|gb|EDO85184.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e]
 gi|157936733|gb|EDO92403.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237]
 gi|160699005|gb|EDP88975.1| GTPase family protein [Burkholderia mallei ATCC 10399]
 gi|254218387|gb|EET07771.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a]
          Length = 445

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/429 (57%), Positives = 323/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVNDMINEAL--EVAYAG--EPQESEEAAA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|254179556|ref|ZP_04886155.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655]
 gi|184210096|gb|EDU07139.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655]
          Length = 445

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/429 (57%), Positives = 323/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISATHGDGVNDMINEAL--EVAYAG--EPQESEEAAA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|238027075|ref|YP_002911306.1| GTP-binding protein Der [Burkholderia glumae BGR1]
 gi|237876269|gb|ACR28602.1| GTP-binding protein EngA [Burkholderia glumae BGR1]
          Length = 448

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/429 (56%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E  +   
Sbjct: 121 AEGMKYTAVAADFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEDAAQ 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 177 SRGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA F+FISA +   I   + S++  Y +++  L
Sbjct: 297 VNKWDGLDSHARERTKADLTRKLKFLEFAKFHFISAAEKTGIGPLLRSVDDAYAAAMKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  + + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTDTYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF+L
Sbjct: 417 NRFRETFAL 425


>gi|121598397|ref|YP_993149.1| GTP-binding protein EngA [Burkholderia mallei SAVP1]
 gi|217421388|ref|ZP_03452892.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576]
 gi|237812544|ref|YP_002896995.1| GTP-binding protein EngA [Burkholderia pseudomallei MSHR346]
 gi|238563546|ref|ZP_00438709.2| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4]
 gi|242314802|ref|ZP_04813818.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b]
 gi|251767656|ref|ZP_02268028.2| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20]
 gi|254197870|ref|ZP_04904292.1| GTP-binding protein EngA [Burkholderia pseudomallei S13]
 gi|254199946|ref|ZP_04906312.1| GTP-binding protein EngA [Burkholderia mallei FMH]
 gi|254206279|ref|ZP_04912631.1| GTP-binding protein EngA [Burkholderia mallei JHU]
 gi|52426961|gb|AAU47554.1| GTPase family protein [Burkholderia mallei ATCC 23344]
 gi|76581515|gb|ABA50990.1| GTPase family protein [Burkholderia pseudomallei 1710b]
 gi|121227207|gb|ABM49725.1| GTPase family protein [Burkholderia mallei SAVP1]
 gi|147749542|gb|EDK56616.1| GTP-binding protein EngA [Burkholderia mallei FMH]
 gi|147753722|gb|EDK60787.1| GTP-binding protein EngA [Burkholderia mallei JHU]
 gi|169654611|gb|EDS87304.1| GTP-binding protein EngA [Burkholderia pseudomallei S13]
 gi|217395130|gb|EEC35148.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576]
 gi|237503777|gb|ACQ96095.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei MSHR346]
 gi|238520490|gb|EEP83949.1| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4]
 gi|242138041|gb|EES24443.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b]
 gi|243062055|gb|EES44241.1| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20]
          Length = 460

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/429 (57%), Positives = 323/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 16  MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 75

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 76  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 135

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +
Sbjct: 136 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVNDMINEAL--EVAYAG--EPQESEEAAA 191

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 192 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAG 251

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 252 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 311

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L
Sbjct: 312 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 371

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 372 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 431

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 432 NRFRETFSL 440


>gi|115351797|ref|YP_773636.1| GTP-binding protein EngA [Burkholderia ambifaria AMMD]
 gi|170702835|ref|ZP_02893684.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10]
 gi|171321331|ref|ZP_02910290.1| small GTP-binding protein [Burkholderia ambifaria MEX-5]
 gi|122323095|sp|Q0BEX1.1|DER_BURCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|115281785|gb|ABI87302.1| small GTP-binding protein [Burkholderia ambifaria AMMD]
 gi|170132253|gb|EDT00732.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10]
 gi|171093388|gb|EDT38576.1| small GTP-binding protein [Burkholderia ambifaria MEX-5]
          Length = 445

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/429 (56%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+H+M +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA  ++ISA K   I + M S++  Y +++  L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPP+IVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|413962510|ref|ZP_11401737.1| GTP-binding protein Der [Burkholderia sp. SJ98]
 gi|413928342|gb|EKS67630.1| GTP-binding protein Der [Burkholderia sp. SJ98]
          Length = 446

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/430 (56%), Positives = 327/430 (76%), Gaps = 6/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           FEP  K GI+HEM +QT+QA+ E+DI++FIVDGR GL  QDK I ++LRK+G+P+ LV+N
Sbjct: 61  FEPVAKDGILHEMARQTRQAVEEADIVVFIVDGRNGLAPQDKAIADYLRKTGRPLFLVVN 120

Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K+E +  S+++ DFYELG+G+P  ISA +G+G+   + + L I   YK   + +E  +  
Sbjct: 121 KAEGMKYSAVAADFYELGLGDPRAISAAHGDGVVEMINDALDIA--YKD--QPEESEDEK 176

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           +   +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 177 AKHGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDSIYVDFERQGRKYTLIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 237 GLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISEQDAHIAGFVVEQGRALVV 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  + R+  K+++ +KL FL FA F+++SA++   I + M+S++  Y +++  
Sbjct: 297 GVNKWDGLDSHVRERTKSDLTRKLKFLDFAKFHYVSALEKTGIGALMKSVDDAYAAAMAK 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           L T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIV+HGN L  I + YKRYL
Sbjct: 357 LPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVVHGNALDAITDTYKRYL 416

Query: 419 EKYFYRTFSL 428
           E  F  TF L
Sbjct: 417 EGRFRETFGL 426


>gi|330817163|ref|YP_004360868.1| GTPase family protein [Burkholderia gladioli BSR3]
 gi|327369556|gb|AEA60912.1| GTPase family protein [Burkholderia gladioli BSR3]
          Length = 448

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 242/429 (56%), Positives = 321/429 (74%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRAGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E  +  +
Sbjct: 121 AEGMKYTAVASDFYELGMGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADDTQA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 177 SRGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R   K ++ +KL FL FA F+FISA +   I   + S++  Y +++  L
Sbjct: 297 VNKWDGLDAHTRDRTKADLTRKLKFLEFAKFHFISAAEKTGIGPLLRSVDDAYAAAMKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPP+IV+HGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPVIVVHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF+L
Sbjct: 417 NRFRETFAL 425


>gi|167587055|ref|ZP_02379443.1| GTP-binding protein EngA [Burkholderia ubonensis Bu]
          Length = 445

 Score =  521 bits (1342), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/429 (56%), Positives = 320/429 (74%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE +  ++++ DFYELG+G+P  ISA +G+G+   +   L +        + +E     +
Sbjct: 121 SEGMKYTAVASDFYELGLGDPRAISAAHGDGVTEMINEALGVAYA----GQPEEEDEDKA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 177 SRGTKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLTRKLKFLEFAKFHFISAAEKTGIGPLMRSVDDAYGAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPP+IVIHGN L  + + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPVIVIHGNALDAVTDTYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|323526574|ref|YP_004228727.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001]
 gi|407714021|ref|YP_006834586.1| GTPase Der [Burkholderia phenoliruptrix BR3459a]
 gi|323383576|gb|ADX55667.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001]
 gi|407236205|gb|AFT86404.1| GTPase Der [Burkholderia phenoliruptrix BR3459a]
          Length = 445

 Score =  521 bits (1341), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 318/429 (74%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ ESDI++FIVDGR GL  QDK+I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKVIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+++ DFYELG+G+P  ISA +G+G+   +   L +    +     +E     +
Sbjct: 121 AEGMKYSAVAADFYELGLGDPRAISAAHGDGVTEMINEALGVAYAGQP----EESDEEKA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI   FE   K Y LIDTAG
Sbjct: 177 AHGIKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDSHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMSKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 417 NRFRETFKL 425


>gi|377820986|ref|YP_004977357.1| small GTP-binding protein [Burkholderia sp. YI23]
 gi|357935821|gb|AET89380.1| small GTP-binding protein [Burkholderia sp. YI23]
          Length = 446

 Score =  521 bits (1341), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 244/430 (56%), Positives = 325/430 (75%), Gaps = 6/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           FEP  K GI+HEM +QT+QA+ E+DI++FIVDGR GL  QDK I ++LRK+G+P+ LV+N
Sbjct: 61  FEPIAKDGILHEMARQTRQAVEEADIVVFIVDGRNGLAPQDKAIADYLRKTGRPLFLVVN 120

Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K+E +  S+++ DFYELG+G+P  ISA +G+G+   + + L I   YK   + +E     
Sbjct: 121 KAEGMKYSAVAADFYELGLGDPRAISAAHGDGVVEMINDALDIA--YKD--QPEETEEEK 176

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           +   +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 177 AKHGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDSIYVDFERQGRKYTLIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 237 GLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFVVEQGRALVV 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  + R+  K ++ +KL FL FA F+++SA++   I + M+S++  Y +++  
Sbjct: 297 GVNKWDGLDSHVRERTKADLSRKLKFLDFAKFHYVSALEKTGIGALMKSVDDAYAAAMAK 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           L T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIV+HGN L  I + YKRYL
Sbjct: 357 LPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVVHGNALDAITDTYKRYL 416

Query: 419 EKYFYRTFSL 428
           E  F  TF L
Sbjct: 417 EGRFRETFGL 426


>gi|167569736|ref|ZP_02362610.1| GTP-binding protein EngA [Burkholderia oklahomensis C6786]
          Length = 445

 Score =  521 bits (1341), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K+Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKRYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA  +FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERAKADLARKLKFLDFAKSHFISAAEKTGIGPLMRSVDDAYAAAMKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|91784203|ref|YP_559409.1| GTP-binding protein EngA [Burkholderia xenovorans LB400]
 gi|123168328|sp|Q13X32.1|DER_BURXL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|91688157|gb|ABE31357.1| Small GTP-binding protein [Burkholderia xenovorans LB400]
          Length = 445

 Score =  521 bits (1341), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/429 (57%), Positives = 319/429 (74%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ ESDI++FIVDGR GL  QDK I ++LRK G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+++ DFYELG+G+P  ISA +G+G+   +   L  E+ Y    + +E  +  +
Sbjct: 121 AEGMKYSTVAADFYELGLGDPRAISAAHGDGVTEMINEAL--EVAYAG--QPEENDDEKA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI   FE   K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I   YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 417 NRFRETFKL 425


>gi|390568827|ref|ZP_10249119.1| GTP-binding protein Der [Burkholderia terrae BS001]
 gi|420254110|ref|ZP_14757131.1| ribosome-associated GTPase EngA [Burkholderia sp. BT03]
 gi|389939176|gb|EIN01013.1| GTP-binding protein Der [Burkholderia terrae BS001]
 gi|398050089|gb|EJL42477.1| ribosome-associated GTPase EngA [Burkholderia sp. BT03]
          Length = 446

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 244/431 (56%), Positives = 325/431 (75%), Gaps = 8/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           FEP  K GI+HEM +QT+QA+ ESDI++FIVDGR GL  QDK I ++LRK+G+PI LV+N
Sbjct: 61  FEPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVN 120

Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           KSE +  +S++ DFYELG+G+P  +SA +G+G+   +   L +      +  + E ++  
Sbjct: 121 KSEGMKYTSVAADFYELGLGDPRAVSAAHGDGVTEMINEALDV-----AYAGQPEESDEE 175

Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
             ++ +K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE   KKY LIDT
Sbjct: 176 KAQHGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDT 235

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALV 295

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++ 
Sbjct: 296 VGVNKWDGLDPHVRERTKADLQRKLKFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMT 355

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  + + YKRY
Sbjct: 356 KLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTDTYKRY 415

Query: 418 LEKYFYRTFSL 428
           LE  F  TF+L
Sbjct: 416 LENRFRETFAL 426


>gi|307729253|ref|YP_003906477.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003]
 gi|307583788|gb|ADN57186.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003]
          Length = 445

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/429 (57%), Positives = 317/429 (73%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ ESDI++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+++ DFYELG+G+P  ISA +G+G+   +   L +        + +E  +   
Sbjct: 121 AEGMKYSAVAADFYELGLGDPRAISAAHGDGVTEMINEALGVAYA----GQPEESDDDKE 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI   FE   K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDSHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYTAAMSKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 417 NRFRETFKL 425


>gi|385209022|ref|ZP_10035890.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1]
 gi|385181360|gb|EIF30636.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1]
          Length = 445

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/429 (57%), Positives = 319/429 (74%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ ESDI++FIVDGR GL  QDK I ++LRK G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+++ DFYELG+G+P  ISA +G+G+   +   L  E+ Y    + +E  +  +
Sbjct: 121 AEGMKYSTVAADFYELGLGDPRAISAAHGDGVTEMINEAL--EVAYAG--QPEENDDEKA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI   FE   K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I   YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 417 NRFRETFKL 425


>gi|170694783|ref|ZP_02885934.1| small GTP-binding protein [Burkholderia graminis C4D1M]
 gi|170140414|gb|EDT08591.1| small GTP-binding protein [Burkholderia graminis C4D1M]
          Length = 445

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/429 (57%), Positives = 316/429 (73%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ ESDI++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+++ DFYELG+G+P  ISA +G+G+   +   L +        + +E      
Sbjct: 121 AEGMKYSTVAADFYELGLGDPRAISAAHGDGVTEMINEALGVAYA----GQPEESDEDKE 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI   FE   K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDSHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMSKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I   YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 417 NRFRETFKL 425


>gi|167562554|ref|ZP_02355470.1| GTP-binding protein EngA [Burkholderia oklahomensis EO147]
          Length = 445

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/429 (57%), Positives = 322/429 (75%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGVRPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K+Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKRYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA  +FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERAKADLARKLKFLDFAKSHFISAAEKTGIGPLMRSVDDAYAAAMKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TFSL
Sbjct: 417 NRFRETFSL 425


>gi|350544506|ref|ZP_08914103.1| GTP-binding protein EngA [Candidatus Burkholderia kirkii UZHbot1]
 gi|350527722|emb|CCD37535.1| GTP-binding protein EngA [Candidatus Burkholderia kirkii UZHbot1]
          Length = 463

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 241/431 (55%), Positives = 326/431 (75%), Gaps = 8/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 18  MKPVIALVGRPNVGKSTLFNRLTRSRDALVAHLPGLTRDRHYGEGRMGGERPYLVVDTGG 77

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           FEP  K GI+HEM +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+P+ LV+N
Sbjct: 78  FEPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPLFLVVN 137

Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K+E +  ++++ DFYELG+G+P  ISA +G+G+   + + L I      +  + E T   
Sbjct: 138 KAEGMKYTAVASDFYELGLGDPRAISAAHGDGVVEMINDALDI-----AYADQPEETEEE 192

Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
             ++ IK+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRDSI   FE   +KY LIDT
Sbjct: 193 KAQHGIKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDSIYVDFERQGRKYTLIDT 252

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+
Sbjct: 253 AGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISEQDAHIAGFVVEQGRALV 312

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V VNKWD +  + R+  K ++ +KL FL FA F+++SA++   I + M+S++  Y ++++
Sbjct: 313 VGVNKWDGLDSHVRERTKADLTRKLKFLDFAKFHYVSALEKTGIGALMKSVDEAYAAAMV 372

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIV+HGN L  + + YKRY
Sbjct: 373 KLPTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVVHGNALDAVTDTYKRY 432

Query: 418 LEKYFYRTFSL 428
           LE  F  TF L
Sbjct: 433 LEGRFRETFGL 443


>gi|295676899|ref|YP_003605423.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002]
 gi|295436742|gb|ADG15912.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002]
          Length = 445

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 320/429 (74%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ ESD+++FIVDGR GL  QDK I ++LRK G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEESDVVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYTNVAADFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDKE 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYTAAMSKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITDTYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 417 NRFRETFKL 425


>gi|73541770|ref|YP_296290.1| GTP-binding protein EngA [Ralstonia eutropha JMP134]
 gi|123732900|sp|Q46ZI7.1|DER_RALEJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|72119183|gb|AAZ61446.1| Small GTP-binding protein protein domain:GTP-binding protein
           [Ralstonia eutropha JMP134]
          Length = 447

 Score =  518 bits (1333), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 241/429 (56%), Positives = 323/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG + FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGDRPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD+ I ++LRK+G+ ++L +NK
Sbjct: 61  EPVVKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRVMLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +S++ DFYELG+G+P+ ISA +G+G++  ++  L + +  +    ++   +  S
Sbjct: 121 AEGMKYTSVAADFYELGMGDPYAISAAHGDGVRELVDEALELAVQERPELAEE---DADS 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE   K Y LIDTAG
Sbjct: 178 GKGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+V 
Sbjct: 238 LRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FLSFA F+F+SA +   I + M S++  Y ++++ L
Sbjct: 298 VNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R  + RPKLRYAHQGG NPPIIVIHGN L  +   Y+RYLE
Sbjct: 358 PTPQLTRVLQEAVEFQQPKRAGVSRPKLRYAHQGGSNPPIIVIHGNALSSVSETYRRYLE 417

Query: 420 KYFYRTFSL 428
             +   F L
Sbjct: 418 NRYRAAFKL 426


>gi|194290002|ref|YP_002005909.1| gtp-binding protein enga [Cupriavidus taiwanensis LMG 19424]
 gi|238692737|sp|B3R1J8.1|DER_CUPTR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|193223837|emb|CAQ69846.1| Ribosome-Associated GTP-binding protein protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 447

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 248/431 (57%), Positives = 323/431 (74%), Gaps = 8/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK+GI+ EM KQTKQA++E+D++IFIVDGR GL  QD+ I ++LRK+G+ I+L +NK
Sbjct: 61  EPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +S++ DFYELG+G+P+ ISA +G+G++  ++    IEL  ++   + E     S
Sbjct: 121 AEGMKYTSVAADFYELGMGDPYAISAAHGDGVRELVDE--AIELAVQE---RPELAEEAS 175

Query: 180 IEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
            E   +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE   K Y LIDT
Sbjct: 176 DEGKGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDT 235

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 236 AGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALV 295

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V VNKWD +  + R  IK+++++KL FLSFA F+F+SA +   I + M S++  Y ++++
Sbjct: 296 VGVNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAYAAAMV 355

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TR L  A++   P R    RPKLRYAHQGG NPPIIVIHGN L  +   Y+RY
Sbjct: 356 KLPTPQLTRVLQEAVEFQQPKRVGASRPKLRYAHQGGSNPPIIVIHGNALSGVAETYRRY 415

Query: 418 LEKYFYRTFSL 428
           LE  F   F L
Sbjct: 416 LENRFRAAFKL 426


>gi|187924514|ref|YP_001896156.1| GTP-binding protein EngA [Burkholderia phytofirmans PsJN]
 gi|238689579|sp|B2SXS6.1|DER_BURPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|187715708|gb|ACD16932.1| small GTP-binding protein [Burkholderia phytofirmans PsJN]
          Length = 445

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 316/429 (73%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYGEG  G + ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRTRDALVADLPGLTRDRHYGEGRAGDRPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ ESDI++FIVDGR GL  QDK I ++LRK G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+++ DFYELG+G+P  ISA +G+G+   +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYSNVAADFYELGLGDPRAISAAHGDGVTEMINEAL--EVAYAG--QPEESDEEKQ 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI   FE   K Y LIDTAG
Sbjct: 177 TRGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I   YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 417 NRFRETFKL 425


>gi|209521123|ref|ZP_03269851.1| small GTP-binding protein [Burkholderia sp. H160]
 gi|209498433|gb|EDZ98560.1| small GTP-binding protein [Burkholderia sp. H160]
          Length = 445

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 247/429 (57%), Positives = 320/429 (74%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG  G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRAGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ ESD+++FIVDGR GL  QDK I ++LRK G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEESDVVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E      
Sbjct: 121 AEGMKYANVAADFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDEE 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V 
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++++KL FL FA F+FISA +   I   M S++  Y +++  L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYTAAMSKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITDTYKRYLE 416

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 417 NRFRETFKL 425


>gi|94311040|ref|YP_584250.1| GTP-binding protein Der [Cupriavidus metallidurans CH34]
 gi|123383733|sp|Q1LLJ5.1|DER_RALME RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|93354892|gb|ABF08981.1| GTP-binding protein [Cupriavidus metallidurans CH34]
          Length = 447

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/429 (55%), Positives = 323/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG + FI+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGDRPFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IF+VDGR GL  QD++I ++LRK+G+ ++L INK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRVMLAINK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +S++ DFYELG+G+P+ IS+ +G+G++  ++  L + +  +     +E    H 
Sbjct: 121 AEGMKYTSVAADFYELGMGDPYAISSTHGDGVRELVDEALDLAVQERPELADQEDAGQHG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +   K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE   K Y LIDTAG
Sbjct: 181 V---KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISEQDAHIAGFIVESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  +QR  +K+++++KL FLSFA  +F+SA +   I + + S++  Y +++I L
Sbjct: 298 VNKWDGLDGHQRDRVKHDLERKLQFLSFANIHFVSARERTGIGALLRSVDDAYAAAMIKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L  A++   P R  + RPKLRYAHQGG NPPIIV+HGN L  + + Y+RYLE
Sbjct: 358 PTPQITRVLQEAVEFQQPKRVGVSRPKLRYAHQGGSNPPIIVVHGNALSGVTDAYRRYLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 NRFRTAFKL 426


>gi|430806176|ref|ZP_19433291.1| GTP-binding protein Der [Cupriavidus sp. HMR-1]
 gi|429501556|gb|EKZ99887.1| GTP-binding protein Der [Cupriavidus sp. HMR-1]
          Length = 447

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/429 (55%), Positives = 322/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG + FI+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGDRPFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IF+VDGR GL  QD++I ++LRK+G+ ++L INK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRVMLAINK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +S++ DFYELG+G+P+ IS+ +G+G+   ++  L + +  +     +E    H 
Sbjct: 121 AEGMKYTSVAADFYELGMGDPYAISSTHGDGVHELVDEALDLAVQERPELADQEDAGQHG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +   K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE   K Y LIDTAG
Sbjct: 181 V---KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISEQDAHIAGFIVESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  +QR  +K+++++KL FLSFA  +F+SA +   I + + S++  Y +++I L
Sbjct: 298 VNKWDGLDGHQRDRVKHDLERKLQFLSFANLHFVSARERTGIGALLRSVDDAYAAAMIKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L  A++   P R  + RPKLRYAHQGG NPPIIV+HGN L  + + Y+RYLE
Sbjct: 358 PTPQITRVLQEAVEFQQPKRVGVSRPKLRYAHQGGSNPPIIVVHGNALSGVTDAYRRYLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 NRFRTAFKL 426


>gi|186476174|ref|YP_001857644.1| GTP-binding protein EngA [Burkholderia phymatum STM815]
 gi|238691310|sp|B2JIU7.1|DER_BURP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|184192633|gb|ACC70598.1| small GTP-binding protein [Burkholderia phymatum STM815]
          Length = 446

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/431 (56%), Positives = 325/431 (75%), Gaps = 8/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           FEP  K GI+ EM +QT+QA+ ESD+I+FIVDGR GL  QDK I ++LRK+G+PI LV+N
Sbjct: 61  FEPVAKDGILFEMARQTRQAVEESDVIVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVN 120

Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K+E +  ++++ DFYELG+G+P  ISA +G+G+   +   L +      +  + E ++  
Sbjct: 121 KAEGMKYTNVAADFYELGLGDPRAISAAHGDGVTEMINEALDV-----AYAGQPEESDEE 175

Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
             ++ IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE   KKY LIDT
Sbjct: 176 KAQHGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDT 235

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALV 295

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V VNKWD +  + R+  K+++++KL FL FA F+FISA +   I   M S++  Y +++ 
Sbjct: 296 VGVNKWDGLDPHVRERTKSDLQRKLKFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMS 355

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  + + YKRY
Sbjct: 356 KLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTDTYKRY 415

Query: 418 LEKYFYRTFSL 428
           LE  F  TF+L
Sbjct: 416 LENRFRETFAL 426


>gi|339326391|ref|YP_004686084.1| GTPase Der [Cupriavidus necator N-1]
 gi|338166548|gb|AEI77603.1| GTPase Der [Cupriavidus necator N-1]
          Length = 456

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/431 (57%), Positives = 322/431 (74%), Gaps = 8/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG++ FI IDTGGF
Sbjct: 10  MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK+GI+ EM KQTKQA++E+D++IFIVDGR GL  QD+ I ++LRK+G+ I+L +NK
Sbjct: 70  EPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNK 129

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +S++ DFYELG+G+P+ ISA +G+G+   ++    IEL  ++   + E     S
Sbjct: 130 AEGMKYTSVAADFYELGMGDPYAISAAHGDGVSELVDE--AIELAVQE---RPELAEEIS 184

Query: 180 IEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
            E   +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE   K Y LIDT
Sbjct: 185 DEGKGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDT 244

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 245 AGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISEQDAHIAGFIVESGRALV 304

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V VNKWD +  + R  IK+++++KL FLSFA F+F+SA +   I + M S++  + ++++
Sbjct: 305 VGVNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAFAAAMV 364

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TR L  A++   P R    RPKLRYAHQGG NPPIIVIHGN L  +   Y+RY
Sbjct: 365 KLPTPQLTRVLQEAVEFQQPKRVGASRPKLRYAHQGGSNPPIIVIHGNALSGVAETYRRY 424

Query: 418 LEKYFYRTFSL 428
           LE  F   F L
Sbjct: 425 LENRFRTAFKL 435


>gi|312796097|ref|YP_004029019.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454]
 gi|312167872|emb|CBW74875.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454]
          Length = 444

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 236/429 (55%), Positives = 318/429 (74%), Gaps = 6/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT+QA+ E+D+++F+VDGR GL  QDK I ++LRK+G+PI LV+NK
Sbjct: 61  EPVAKDGILHEMARQTRQAVEEADVVVFVVDGRNGLAPQDKTIADYLRKTGRPIFLVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+++ DFYELG+G+P  ISA +G+G+   +   L +      +  +      H+
Sbjct: 121 AEGMKYSAVAADFYELGLGDPRAISAAHGDGVSEMIGQALAV-----AYADRAPHDEAHA 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI   FE   + Y LIDTAG
Sbjct: 176 GHGVKIAIVGRPNVGKSTLVNALLGEERVIAFDLPGTTRDSIYIDFERQGRPYTLIDTAG 235

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE +EKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L++ 
Sbjct: 236 LRKRGKVFEAVEKFSVVKTLQSIADANVVILLLDARQDISEQDAHIAGFVVEQGRALVIG 295

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+  K ++ +KL FL FA  ++ISA +   I + + S++  Y +++  L
Sbjct: 296 VNKWDGLDEHVRERTKADLARKLKFLDFAKSHYISAAEKTGIGALLRSVDAAYAAAMAKL 355

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRALI A++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  I + YKRYLE
Sbjct: 356 PTPKLTRALIDAVQFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITDTYKRYLE 415

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 416 GRFRETFGL 424


>gi|113868334|ref|YP_726823.1| GTP-binding protein EngA [Ralstonia eutropha H16]
 gi|113527110|emb|CAJ93455.1| GTP-binding protein [Ralstonia eutropha H16]
          Length = 456

 Score =  511 bits (1316), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/429 (57%), Positives = 321/429 (74%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG++ FI IDTGGF
Sbjct: 10  MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK+GI+ EM KQTKQA++E+D++IFIVDGR GL  QD+ I ++LRK+G+ I+L +NK
Sbjct: 70  EPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNK 129

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +S++ DFYELG+G+P+ ISA +G+G+   ++    IEL  ++  +  E      
Sbjct: 130 AEGMKYTSVAADFYELGMGDPYAISAAHGDGVSELVDE--AIELAVQERPELGEEIPDEG 187

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE   K Y LIDTAG
Sbjct: 188 -KGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 246

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+V 
Sbjct: 247 LRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVG 306

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FLSFA F+F+SA +   I + M S++  + ++++ L
Sbjct: 307 VNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAFAAAMVKL 366

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R    RPKLRYAHQGG NPPIIVIHGN L  +   Y+RYLE
Sbjct: 367 PTPQLTRVLQEAVEFQQPKRVGASRPKLRYAHQGGSNPPIIVIHGNALSGVAETYRRYLE 426

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 427 NRFRTAFKL 435


>gi|241662759|ref|YP_002981119.1| GTP-binding protein EngA [Ralstonia pickettii 12D]
 gi|404378009|ref|ZP_10983109.1| GTPase Der [Ralstonia sp. 5_2_56FAA]
 gi|240864786|gb|ACS62447.1| small GTP-binding protein [Ralstonia pickettii 12D]
 gi|348615940|gb|EGY65448.1| GTPase Der [Ralstonia sp. 5_2_56FAA]
          Length = 447

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 238/429 (55%), Positives = 322/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  +L + +  +  E  + H 
Sbjct: 121 AEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL--DLAFAERPELAEAADAHD 178

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDTAG
Sbjct: 179 -HGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+L+LDAQQ+IS QD +IA FI ESGR+L++ 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FLSFA  ++ISA +   I + M+S++  Y ++++ L
Sbjct: 298 VNKWDGLTGHARDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L+ A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+RYLE
Sbjct: 358 PTPKLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRYLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 GRFREAFQL 426


>gi|187928156|ref|YP_001898643.1| GTP-binding protein EngA [Ralstonia pickettii 12J]
 gi|238691801|sp|B2U9V3.1|DER_RALPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|187725046|gb|ACD26211.1| small GTP-binding protein [Ralstonia pickettii 12J]
          Length = 447

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 237/429 (55%), Positives = 322/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  ISA +G+G+ + +   L  +L + +  +  E  + H 
Sbjct: 121 AEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL--DLAFAERPELAEAADAHD 178

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDTAG
Sbjct: 179 -HGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+L+LDAQQ+IS QD +IA FI ESGR+L++ 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FLSFA  ++ISA +   I + M+S++  Y ++++ L
Sbjct: 298 VNKWDGLTGHARDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L+ A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+LE
Sbjct: 358 PTPKLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 GRFREAFQL 426


>gi|17545938|ref|NP_519340.1| GTP-binding protein EngA [Ralstonia solanacearum GMI1000]
 gi|26006721|sp|Q8Y026.1|DER_RALSO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|17428233|emb|CAD14921.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000]
          Length = 447

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 235/429 (54%), Positives = 320/429 (74%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  IS+ +G+G++  ++  L +    +    +    + H 
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRELVDEALDLAFAERPELAEAAEGHDHG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDTAG
Sbjct: 181 T---RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++ 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FLSFA  ++ISA +   I + M+S++  Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDMERKLQFLSFANVHYISAKQRTGIGALMKSVDDAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+LE
Sbjct: 358 PTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 GRFRDAFQL 426


>gi|344171684|emb|CCA84304.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
           syzygii R24]
          Length = 447

 Score =  508 bits (1308), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/429 (54%), Positives = 322/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  IS+ +G+G+++ ++  L +    +    +    + H 
Sbjct: 121 AEGMKYTTVATDFYELGLGDPRAISSAHGDGVRDLVDEALDLAFAERPELAEAAEGHDHG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDTAG
Sbjct: 181 T---RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++ 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FLSFA  ++ISA + + I + M+S++  Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDLERKLQFLSFANVHYISAKQRSGIGALMKSVDDAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+LE
Sbjct: 358 PTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 GRFRDAFQL 426


>gi|421888527|ref|ZP_16319618.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
           solanacearum K60-1]
 gi|378966147|emb|CCF96366.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
           solanacearum K60-1]
          Length = 447

 Score =  508 bits (1307), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/431 (54%), Positives = 322/431 (74%), Gaps = 8/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  IS+ +G+G+++ ++  L      + F ++ E  +   
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEALD-----QAFSERPELADAAQ 175

Query: 180 IE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                 ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDT
Sbjct: 176 AHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDT 235

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALV 295

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + VNKWD +  + R  IK+++++KL FLSFA  ++ISA +   I + M+S++  Y ++++
Sbjct: 296 IGVNKWDGLDGHARDRIKHDLERKLQFLSFANVHYISAKQRTGIGALMKSVDDAYAAAMV 355

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TR L  A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+
Sbjct: 356 KLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRF 415

Query: 418 LEKYFYRTFSL 428
           LE  F   F L
Sbjct: 416 LEGRFRDAFQL 426


>gi|299067270|emb|CBJ38467.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
           solanacearum CMR15]
          Length = 447

 Score =  508 bits (1307), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/429 (54%), Positives = 320/429 (74%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  IS+ +G+G++  ++  L +    +    +    + H 
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRELVDEALDLAFAERPELAEAAEGHDHG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDTAG
Sbjct: 181 T---RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++ 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FLSFA  ++ISA +   I + M+S++  Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDMERKLQFLSFANVHYISAKQRTGIGALMKSVDDAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+LE
Sbjct: 358 PTPKLTRVLQDAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 GRFRDAFQL 426


>gi|300691802|ref|YP_003752797.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
           solanacearum PSI07]
 gi|299078862|emb|CBJ51523.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
           solanacearum PSI07]
 gi|344166991|emb|CCA79182.1| GTPase involved in ribosome synthesis and maintenance [blood
           disease bacterium R229]
          Length = 447

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 237/429 (55%), Positives = 324/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  IS+ +G+G+++ ++  L  +L + +  +  E    H 
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEAL--DLAFAERPELAEAAEDHG 178

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDTAG
Sbjct: 179 YG-TRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++ 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FLSFA  ++ISA + + I + M+S++  Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDLERKLQFLSFANVHYISAKQRSGIGALMKSVDDAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+LE
Sbjct: 358 PTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 GRFRDAFQL 426


>gi|300704410|ref|YP_003746013.1| GTPase [Ralstonia solanacearum CFBP2957]
 gi|299072074|emb|CBJ43406.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
           solanacearum CFBP2957]
          Length = 447

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/431 (54%), Positives = 322/431 (74%), Gaps = 8/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  IS+ +G+G+++ ++  L      + F ++ E  +   
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEALD-----QAFSERPELADAAQ 175

Query: 180 IE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                 ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDT
Sbjct: 176 AHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDT 235

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALV 295

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + VNKWD +  + R  IK+++++KL FL+FA  ++ISA +   I + M+S++  Y ++++
Sbjct: 296 IGVNKWDGLDGHARDRIKHDLERKLQFLAFANVHYISAKQRTGIGALMKSVDDAYAAAMV 355

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TR L  A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+
Sbjct: 356 KLPTPKLTRVLQEAVEFQQPRRAGISRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRF 415

Query: 418 LEKYFYRTFSL 428
           LE  F   F L
Sbjct: 416 LEGRFRDAFQL 426


>gi|83747951|ref|ZP_00944982.1| GTP-binding protein [Ralstonia solanacearum UW551]
 gi|421897156|ref|ZP_16327524.1| gtp-binding protein [Ralstonia solanacearum MolK2]
 gi|83725369|gb|EAP72516.1| GTP-binding protein [Ralstonia solanacearum UW551]
 gi|206588362|emb|CAQ35325.1| gtp-binding protein [Ralstonia solanacearum MolK2]
          Length = 447

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 234/429 (54%), Positives = 320/429 (74%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  IS+ +G+G+++ ++  L      +    +    + H 
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEALDQAFSERPELAEAAQAHDHG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDTAG
Sbjct: 181 T---RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++ 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FL+FA  ++ISA +   I + M+S++  Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDLERKLQFLAFANVHYISAKQRTGIGALMKSVDDAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+LE
Sbjct: 358 PTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 GRFRDAFQL 426


>gi|386333812|ref|YP_006029983.1| GTPase [Ralstonia solanacearum Po82]
 gi|334196262|gb|AEG69447.1| GTPase [Ralstonia solanacearum Po82]
          Length = 447

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/431 (54%), Positives = 322/431 (74%), Gaps = 8/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P  IS+ +G+G+++ ++  L      + F ++ E  +   
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEALD-----QAFSERPELADAAQ 175

Query: 180 IE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                 ++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDT
Sbjct: 176 AHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDT 235

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALV 295

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + VNKWD +  + R  IK+++++KL FL+FA  ++ISA +   I + M+S++  Y ++++
Sbjct: 296 IGVNKWDGLDGHARDRIKHDLERKLQFLAFANVHYISAKQRTGIGALMKSVDDAYAAAMV 355

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TR L  A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+R+
Sbjct: 356 KLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRF 415

Query: 418 LEKYFYRTFSL 428
           LE  F   F L
Sbjct: 416 LEGRFRDAFQL 426


>gi|374366363|ref|ZP_09624444.1| GTP-binding protein Der [Cupriavidus basilensis OR16]
 gi|373102147|gb|EHP43187.1| GTP-binding protein Der [Cupriavidus basilensis OR16]
          Length = 447

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 230/429 (53%), Positives = 322/429 (75%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG++ FI IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IF+VDGR GL  QD++I ++LRK+G+ ++L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRVMLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +++  +FYELG+G+P+ IS+ +G+G++  ++  L + +  +    +++  +   
Sbjct: 121 AEGMKYTNVVSEFYELGMGDPYAISSTHGDGVRELVDEALELAVKERPELAEEDEGDQRG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +   K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE   K Y LIDTAG
Sbjct: 181 V---KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ++S QD +IA FI ESGR+L+V 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDVSEQDAHIAGFIVESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FL FA F+F+SA +   I++ + S++  Y ++++ L
Sbjct: 298 VNKWDGLDGHSRDRIKHDLERKLQFLDFANFHFVSAQQRTGISALLRSVDDAYAAAMVKL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R    RPKLRYAHQGG NPPII++HGN L  I + Y+RYLE
Sbjct: 358 PTPQLTRILQEAVEFQQPRRVGATRPKLRYAHQGGSNPPIIIVHGNSLSGIADTYRRYLE 417

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 418 NRFRSAFKL 426


>gi|421866987|ref|ZP_16298649.1| GTP-binding protein EngA [Burkholderia cenocepacia H111]
 gi|358073151|emb|CCE49527.1| GTP-binding protein EngA [Burkholderia cenocepacia H111]
          Length = 433

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/417 (56%), Positives = 311/417 (74%), Gaps = 5/417 (1%)

Query: 13  VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
           +GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGFEP  K GI+HEM
Sbjct: 1   MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDGILHEM 60

Query: 73  TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
            +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK+E +  ++++ D
Sbjct: 61  ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVATD 120

Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
           FYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E         IK+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEAEEDDPSRGIKIAIVGRP 176

Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
           NVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIE 236

Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
           KFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ VNKWD +  + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHAR 296

Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
              K ++ +KL FL FA  +FISA K   I + M S++  Y +++  L T ++TRALI A
Sbjct: 297 DRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMSKLPTPKLTRALIEA 356

Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSL 428
           ++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE  F  TFSL
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSL 413



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 16/167 (9%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           + +VGRPNVGKSTL N L      +  + PG TRD  Y +     K + +IDT G     
Sbjct: 170 IAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLR--- 226

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           ++G + E  +     +T Q+I +++++I ++D +Q + +QD  I  F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVN 286

Query: 120 KSENIN--------SSISLDFYELGIGNPHIISALYGNGIKNFLENI 158
           K + ++        + ++     L     H ISA    GI   + ++
Sbjct: 287 KWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSV 333


>gi|424904619|ref|ZP_18328129.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
 gi|390930597|gb|EIP87999.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
          Length = 433

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/417 (56%), Positives = 312/417 (74%), Gaps = 5/417 (1%)

Query: 13  VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
           +GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGFEP  K GI+HEM
Sbjct: 1   MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGFEPVAKDGILHEM 60

Query: 73  TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
            +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK+E +  ++++ D
Sbjct: 61  ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVASD 120

Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
           FYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +    K+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAAARGTKIAIVGRP 176

Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
           NVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K+Y LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAGLRRRGKVFEAIE 236

Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
           KFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V VNKWD +  + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVGVNKWDGLDPHVR 296

Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
           +  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L T ++TRALI A
Sbjct: 297 ERTKADLARKLKFLDFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEA 356

Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSL 428
           ++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE  F  TFSL
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSL 413



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 26/172 (15%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           + +VGRPNVGKSTL N L      +  + PG TRD  Y +     K + +IDT G     
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAGLR--- 226

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           ++G + E  +     +T Q+I +++++I ++D +Q + +QD  I  F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVGVN 286

Query: 120 KSENINSSIS-------------LDFYELGIGNPHIISALYGNGIKNFLENI 158
           K + ++  +              LDF +      H ISA    GI   + ++
Sbjct: 287 KWDGLDPHVRERTKADLARKLKFLDFAKF-----HFISAAEKTGIGALMRSV 333


>gi|167893952|ref|ZP_02481354.1| GTP-binding protein EngA [Burkholderia pseudomallei 7894]
          Length = 454

 Score =  501 bits (1290), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/417 (56%), Positives = 312/417 (74%), Gaps = 5/417 (1%)

Query: 13  VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
           +GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGFEP  K GI+HEM
Sbjct: 1   MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGFEPVAKDGILHEM 60

Query: 73  TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
            +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK+E +  ++++ D
Sbjct: 61  ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVASD 120

Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
           FYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +   IK+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVNDMINEAL--EVAYAG--EPQESEEAAAARGIKIAIVGRP 176

Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
           NVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K Y LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLRRRGKVFEAIE 236

Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
           KFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V VNKWD +  + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVGVNKWDGLDPHVR 296

Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
           +  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L T ++TRALI A
Sbjct: 297 ERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEA 356

Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSL 428
           ++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE  F  TFSL
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSL 413



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 20/169 (11%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           + +VGRPNVGKSTL N L      +  + PG TRD  Y +     K + +IDT G     
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLR--- 226

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           ++G + E  +     +T Q+I +++++I ++D RQ + +QD  I  F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVGVN 286

Query: 120 KSENINSSI----------SLDFYELGIGNPHIISALYGNGIKNFLENI 158
           K + ++  +           L F E      H ISA    GI   + ++
Sbjct: 287 KWDGLDPHVRERTKADLARKLKFLEF--AKFHFISAAEKTGIGALMRSV 333


>gi|387902351|ref|YP_006332690.1| GTP-binding protein EngA [Burkholderia sp. KJ006]
 gi|387577243|gb|AFJ85959.1| GTP-binding protein EngA [Burkholderia sp. KJ006]
          Length = 433

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/417 (56%), Positives = 312/417 (74%), Gaps = 5/417 (1%)

Query: 13  VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
           +GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGFEP  K GI+HEM
Sbjct: 1   MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDGILHEM 60

Query: 73  TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
            +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK+E +  ++++ D
Sbjct: 61  ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVATD 120

Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
           FYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E  +      IK+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADDNDPSRGIKIAIVGRP 176

Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
           NVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N KKY LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIE 236

Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
           KFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ VNKWD +  + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHAR 296

Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
              K ++ +KL FL FA  ++ISA K   I + M S++  Y +++  L T ++TRALI A
Sbjct: 297 DRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEA 356

Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSL 428
           ++   P R+  +RPKLRYAHQGG+NPP+IVIHGN L  +   YKRYLE  F  TFSL
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLENRFRETFSL 413



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 16/167 (9%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           + +VGRPNVGKSTL N L      +  + PG TRD  Y +     K + +IDT G     
Sbjct: 170 IAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLR--- 226

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           ++G + E  +     +T Q+I +++++I ++D +Q + +QD  I  F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVN 286

Query: 120 KSENIN--------SSISLDFYELGIGNPHIISALYGNGIKNFLENI 158
           K + ++        + ++     L     H ISA    GI   + ++
Sbjct: 287 KWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSV 333


>gi|421747045|ref|ZP_16184794.1| GTP-binding protein Der [Cupriavidus necator HPC(L)]
 gi|409774363|gb|EKN55994.1| GTP-binding protein Der [Cupriavidus necator HPC(L)]
          Length = 447

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 232/429 (54%), Positives = 314/429 (73%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG    + +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRGADRPYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GI+ EM KQT+QA++E+D++IFIVDGR GL  QD +I ++LRK+G+ ++L +NK
Sbjct: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDLVIADYLRKTGRRVMLAVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++++ DFYELG+G+P+ ISA +G+G++  +E  L   +  +    + E  N   
Sbjct: 121 AEGMKYTAVAADFYELGMGDPYAISATHGDGVRELVEEALEAAVEQRPELAEPEDQNTRG 180

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE   K Y LIDTAG
Sbjct: 181 T---KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ++S QD +IA FI ESGR+L+V 
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDVSEQDAHIAGFIVESGRALVVG 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  IK+++++KL FL FA F+FISA +   I   + S++  Y ++++ +
Sbjct: 298 VNKWDGLDGHTRDRIKHDLQRKLQFLDFANFHFISARERTGIGPLLRSVDEAYAAAMLKM 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A+    P R    RPK+RYAHQGG NPPIIV+HGN L  +   Y+R+LE
Sbjct: 358 PTPKLTRVLHDAVAFQQPRRVGATRPKMRYAHQGGSNPPIIVVHGNSLNAVPETYRRFLE 417

Query: 420 KYFYRTFSL 428
             F   F+L
Sbjct: 418 GRFRAAFNL 426


>gi|134277744|ref|ZP_01764459.1| GTP-binding protein EngA [Burkholderia pseudomallei 305]
 gi|226197301|ref|ZP_03792878.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan
           9]
 gi|386861538|ref|YP_006274487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026b]
 gi|403518915|ref|YP_006653048.1| GTP-binding protein EngA [Burkholderia pseudomallei BPC006]
 gi|418383003|ref|ZP_12966921.1| GTP-binding protein EngA [Burkholderia pseudomallei 354a]
 gi|418539390|ref|ZP_13104986.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026a]
 gi|418540682|ref|ZP_13106207.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258a]
 gi|418546927|ref|ZP_13112113.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258b]
 gi|418553146|ref|ZP_13117984.1| GTP-binding protein EngA [Burkholderia pseudomallei 354e]
 gi|134251394|gb|EBA51473.1| GTP-binding protein EngA [Burkholderia pseudomallei 305]
 gi|225930680|gb|EEH26690.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan
           9]
 gi|385346014|gb|EIF52707.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026a]
 gi|385360816|gb|EIF66723.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258a]
 gi|385362726|gb|EIF68531.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258b]
 gi|385372080|gb|EIF77212.1| GTP-binding protein EngA [Burkholderia pseudomallei 354e]
 gi|385376774|gb|EIF81410.1| GTP-binding protein EngA [Burkholderia pseudomallei 354a]
 gi|385658666|gb|AFI66089.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026b]
 gi|403074557|gb|AFR16137.1| GTP-binding protein EngA [Burkholderia pseudomallei BPC006]
          Length = 433

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/417 (56%), Positives = 312/417 (74%), Gaps = 5/417 (1%)

Query: 13  VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
           +GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGFEP  K GI+HEM
Sbjct: 1   MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGFEPVAKDGILHEM 60

Query: 73  TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
            +QT+QA+ E+D+++FIVDGR GL  QDK I ++LRK+G+PI LV+NK+E +  ++++ D
Sbjct: 61  ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVASD 120

Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
           FYELG+G+P  ISA +G+G+ + +   L  E+ Y    + +E     +   IK+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVNDMINEAL--EVAYAG--EPQESEEAAAARGIKIAIVGRP 176

Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
           NVGKSTL+N+L+GE+RVI +D PGTTRDSI   FE N K Y LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLRRRGKVFEAIE 236

Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
           KFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V VNKWD +  + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVGVNKWDGLDPHVR 296

Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
           +  K ++ +KL FL FA F+FISA +   I + M S++  Y +++  L T ++TRALI A
Sbjct: 297 ERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEA 356

Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSL 428
           ++   P R+  +RPKLRYAHQGG+NPPIIVIHGN L  +   YKRYLE  F  TFSL
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSL 413



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 20/169 (11%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           + +VGRPNVGKSTL N L      +  + PG TRD  Y +     K + +IDT G     
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLR--- 226

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           ++G + E  +     +T Q+I +++++I ++D RQ + +QD  I  F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVGVN 286

Query: 120 KSENINSSI----------SLDFYELGIGNPHIISALYGNGIKNFLENI 158
           K + ++  +           L F E      H ISA    GI   + ++
Sbjct: 287 KWDGLDPHVRERTKADLARKLKFLEF--AKFHFISAAEKTGIGALMRSV 333


>gi|394987681|ref|ZP_10380520.1| ribosome-associated GTPase EngA [Sulfuricella denitrificans skB26]
 gi|393792900|dbj|GAB70159.1| ribosome-associated GTPase EngA [Sulfuricella denitrificans skB26]
          Length = 465

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 231/429 (53%), Positives = 314/429 (73%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP LVLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G + ++++DTGGF
Sbjct: 1   MKPTLVLVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGHGRVGDRPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+HEM +QT QA+ E+D I+F+VD RQGL  QDK+I + LRK G+P+ L +NK
Sbjct: 61  EPVAKDGILHEMARQTLQAVAEADAIVFLVDARQGLAAQDKIIADQLRKMGRPLFLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +   + + +FYELG+G+P +IS  +G G+ +       +EL  + F    +  +   
Sbjct: 121 AEGMRRDVVAAEFYELGLGDPLVISGAHGEGVHDL------VELALESF--PLDEVDEEE 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++ K+AIVG+PNVGKSTL+NSLLGE RVI +D PGTTRDSI   FE ++K Y LIDTAG
Sbjct: 173 DDHPKIAIVGRPNVGKSTLVNSLLGEERVIAFDQPGTTRDSIYIDFERDSKYYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IR+R K FE IEKFSV+KTL+++ +ANVV+L+LDA+Q++S QD +IA FI ESGR+L+V 
Sbjct: 233 IRKRGKVFEAIEKFSVVKTLQAVEDANVVVLVLDARQDVSEQDAHIAGFILESGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  ++R+++K++I +KL FL FA F++ISA++ + +    +SI+  Y S++I +
Sbjct: 293 VNKWDDLSADRREVVKSDIARKLQFLDFAKFHYISALQGSGVGGLFKSIDGAYASAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T R+TR L+ A   H P +    RPKLRYAHQGG NPP+++IHG  L  +   YKRYLE
Sbjct: 353 PTPRLTRILMEATTQHQPPKSGPFRPKLRYAHQGGSNPPLVIIHGTSLSSLSASYKRYLE 412

Query: 420 KYFYRTFSL 428
             F + F L
Sbjct: 413 STFRQAFEL 421


>gi|339483558|ref|YP_004695344.1| GTP-binding protein engA [Nitrosomonas sp. Is79A3]
 gi|338805703|gb|AEJ01945.1| GTP-binding protein engA [Nitrosomonas sp. Is79A3]
          Length = 465

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/429 (55%), Positives = 316/429 (73%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP LVLVGRPNVGKSTLFNRLT +RDA+VA+ PGLTRDRHYG+G IG+K ++++DTGGF
Sbjct: 1   MKPTLVLVGRPNVGKSTLFNRLTRTRDAIVADIPGLTRDRHYGQGRIGEKPYLVMDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK+GI+H M KQT QAI E+D ++FIVDGRQG+   DK+I   LRKSGQ I+LV+NK
Sbjct: 61  EPVVKEGILHAMAKQTLQAIDEADKVLFIVDGRQGVTAHDKIIAEQLRKSGQKILLVVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E + +++ + +FYELG+G+P  +SA++G+ IK   +  L         F   E   + S
Sbjct: 121 TEGMATAVVTAEFYELGLGDPCAVSAIHGDNIKELADYALAD-------FPDVEEEPLES 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            +Y K+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRDSI   F + +K Y LIDTAG
Sbjct: 174 -KYPKIAIVGRPNVGKSTLINTLLGEERVIAFDQPGTTRDSIYIDFAHKDKHYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR   FE IEKFSVIKTL++I +ANV +L+LDA+  IS QD +IA FI E+GR+L++ 
Sbjct: 233 LRRRGHVFETIEKFSVIKTLQAIEDANVAVLILDAKNEISDQDAHIAGFILETGRALVIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   QR  IK  + +KL FLSFA  ++ISA+  + + + + SI+  Y +++  L
Sbjct: 293 VNKWDGLDEYQRDTIKRELTRKLAFLSFAQLHYISALHGSGMKNLLPSIDQAYAAAMADL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TRALI+AI+ HPP R  + RPK+RYAHQGG NPP+I++HG  L ++   Y+RYLE
Sbjct: 353 STPKLTRALIAAIEKHPPPRGGMSRPKMRYAHQGGSNPPLIIVHGTMLNHVPETYRRYLE 412

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 413 NTFREVFKL 421


>gi|358635852|dbj|BAL23149.1| GTP-binding protein [Azoarcus sp. KH32C]
          Length = 442

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 229/429 (53%), Positives = 316/429 (73%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G++ ++++DT GF
Sbjct: 1   MKPTIVLVGRPNVGKSTLFNRLTRTRDALVADQPGLTRDRHYGIGRVGERDYLVVDTAGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +P  K GIMHEM +Q +QAI E+D ++F+VDGR GL   D+ I   LR++G+P+ L++NK
Sbjct: 61  DPVAKTGIMHEMARQAEQAIAEADALLFLVDGRMGLTPHDEQIAERLRRAGRPVHLIVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE ++ +I + +F+ LG+G+P  ISA +G+G+K  ++++L  E P     +++       
Sbjct: 121 SEGMDRAIVAAEFHALGLGDPLPISAAHGDGVKQLVDHVLA-EFPTDGEDEEQASGGP-- 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKSTL+NSLLGE RVI +D PGTTRD+I   FE   + Y LIDTAG
Sbjct: 178 ----RIAIVGRPNVGKSTLVNSLLGEERVIAFDMPGTTRDAIAIPFERGGRDYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE IEKFSVIKTL++I +ANV +L+LDA Q+IS QD +IA FI +SGR+L+V 
Sbjct: 234 LRRRGKVFEAIEKFSVIKTLQAIEQANVAVLVLDASQDISDQDAHIAGFILDSGRALVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWDS+   +R++IK +I  KL FLSFA F++ISA+K   + + M+S++  Y ++ ++L
Sbjct: 294 VNKWDSVDDYRRELIKRDIAHKLGFLSFARFHYISALKGAGVAAVMKSVDGAYAAATVNL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST R+TR L +A+    P R  + RPK+RYAHQGG NPPI+VIHG  L+++ N Y RYLE
Sbjct: 354 STPRLTRTLQAALTKQAPPRHGIFRPKMRYAHQGGSNPPIVVIHGAALEHVPNSYVRYLE 413

Query: 420 KYFYRTFSL 428
           + F   F L
Sbjct: 414 RTFMDAFKL 422


>gi|71908594|ref|YP_286181.1| GTP-binding protein EngA [Dechloromonas aromatica RCB]
 gi|123760409|sp|Q47BS0.1|DER_DECAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|71848215|gb|AAZ47711.1| Small GTP-binding protein protein domain:GTP-binding protein
           [Dechloromonas aromatica RCB]
          Length = 443

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/429 (54%), Positives = 312/429 (72%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP LVLVGRPNVGKSTLFNRLT SRDA+VA+ PGLTRDRHYG G +GKK ++++DTGGF
Sbjct: 1   MKPTLVLVGRPNVGKSTLFNRLTKSRDAIVADMPGLTRDRHYGHGKLGKKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK+GI+HEM +QT+QAI E+D IIF+VDGR GL   DK I N LR+  +P+ + +NK
Sbjct: 61  EPLVKEGILHEMARQTEQAIAEADAIIFVVDGRSGLTPHDKEIANKLRRIDRPVFVAVNK 120

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +NS  +  +F+ELG+G P+ ISA +G GI+  +E  L       + F + E    HS
Sbjct: 121 AEGMNSGMVEAEFHELGLGEPNAISAAHGEGIRGLVEMAL-------ESFPEPEEDEWHS 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + ++VAIVG+PNVGKSTLIN+LLGE RVI +D PGTTRDSI+  FE   +KY+L+DTAG
Sbjct: 174 -DSVRVAIVGRPNVGKSTLINTLLGEERVIAFDAPGTTRDSIEIDFERGGRKYVLVDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSV+KTL+SI +ANVVIL++DAQ ++S QD +IA+FI +SGR+L+V 
Sbjct: 233 MRKRGKVFESIEKFSVVKTLQSIEDANVVILMVDAQADVSDQDAHIADFILQSGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    R+  +  +++KL FL FA F+FISA     + +   S++  Y +++  +
Sbjct: 293 VNKWDGLDAYTREQTRQILQRKLKFLDFAKFHFISARDNIGLGNMFRSVDSAYAAAMAKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T R+TR LI A+    P +  L RPK RYAHQGG NPPIIV+HGN +  + + Y+RYLE
Sbjct: 353 TTPRLTRVLIDAVAKQAPAKHGLFRPKPRYAHQGGSNPPIIVVHGNAVDQVTDSYRRYLE 412

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 413 HTFREAFKL 421


>gi|119897222|ref|YP_932435.1| GTP-binding protein EngA [Azoarcus sp. BH72]
 gi|166224303|sp|A1K3Z3.1|DER_AZOSB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|119669635|emb|CAL93548.1| probable GTP-binding protein [Azoarcus sp. BH72]
          Length = 442

 Score =  494 bits (1272), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 311/429 (72%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G + ++++DT GF
Sbjct: 1   MKPTIVLVGRPNVGKSTLFNRLTKTRDALVADQPGLTRDRHYGVGRVGDRDYLVVDTAGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +P  K GIMHEM +Q +QAI E+D+++F+VDGR G    D  I   LR++G+P+V+V+NK
Sbjct: 61  DPVAKDGIMHEMARQAEQAIAEADVLLFLVDGRAGRTPHDDQIAAHLRRAGRPVVVVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++ ++++ DF+ LG+G P  +SA +G+G+K  +E +L    P     +  E      
Sbjct: 121 AEGLDRATVAADFHALGLGAPLAVSAAHGDGVKALVELVLA-PFPADDEVEAAEDAGP-- 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               +VAIVG+PNVGKSTL+N+LLGE RVI +D PGTTRD+I   FE   K+Y LIDTAG
Sbjct: 178 ----RVAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDAIAIPFERGGKQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE +EKFSVIKTL++I EANVV+L+LDA Q+IS QD +IA F+ ++GR+L+V 
Sbjct: 234 LRRRGKVFEAVEKFSVIKTLQAIQEANVVVLVLDAAQDISDQDAHIAGFVLDTGRALVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++   +R  +K ++ +KL FLSFA F+ ISA++   I + ++S++  Y +++ +L
Sbjct: 294 INKWDAVDDYRRARLKEDMARKLAFLSFARFHQISALRAEGIAALLKSVDGAYAAAMSNL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST R+TR + +A+    P R    RPKLRYAHQGG NPP+IVIHGN L +I N Y R+LE
Sbjct: 354 STPRLTRTMQAAVAKQAPPRHGSARPKLRYAHQGGMNPPVIVIHGNALDHIPNSYVRFLE 413

Query: 420 KYFYRTFSL 428
           + F   F L
Sbjct: 414 RTFMEAFKL 422


>gi|415904117|ref|ZP_11552301.1| Putative Fe-S-cluster redox enzyme [Herbaspirillum frisingense
           GSF30]
 gi|407763612|gb|EKF72252.1| Putative Fe-S-cluster redox enzyme [Herbaspirillum frisingense
           GSF30]
          Length = 380

 Score =  492 bits (1266), Expect = e-136,   Method: Composition-based stats.
 Identities = 222/339 (65%), Positives = 278/339 (82%), Gaps = 1/339 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FGVSDF++MTDL+ SLR KLK    ++AP I+SD  S DGTR
Sbjct: 12  ELGEKPFRAKQLQRWIHQFGVSDFDQMTDLAKSLRDKLKTRAEVRAPAIISDHTSTDGTR 71

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETVFIPE+NR TLC+STQ GCA+NC FCSTG+QGF RNLTV EIIGQL
Sbjct: 72  KWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRFCSTGKQGFNRNLTVAEIIGQL 131

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LR+ K I+   +G+RQITN+VMMGMGEPLLN++ T+ AL+L+L D+AYGLSRR 
Sbjct: 132 WMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFEPTVTALRLMLDDNAYGLSRRR 191

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMIDKL+QECPV LAVSLHASN+ LR+ L+P+++K+PL+EL+LAC RY+ +
Sbjct: 192 VTLSTSGVVPMIDKLSQECPVALAVSLHASNDALRDSLIPLNRKHPLRELMLACKRYLEF 251

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+NDTD HA EL++L+++ +    CK NLIPFN FP S L  S N 
Sbjct: 252 APRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPCKFNLIPFNPFPESGLKRSHNP 311

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RIK FA+ILM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 312 RIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 350


>gi|372489746|ref|YP_005029311.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
 gi|359356299|gb|AEV27470.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
          Length = 461

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/430 (54%), Positives = 312/430 (72%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP LVLVGRPNVGKSTLFNRLT +RDA+VA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTLVLVGRPNVGKSTLFNRLTKTRDAIVADLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI HEM +QT+QAI E+D ++F+VDGR G+  QDK I N LRK  +P+++ +NK
Sbjct: 61  EPLAKDGIFHEMARQTEQAIAEADAVVFVVDGRVGITAQDKEIANKLRKLERPVLVAVNK 120

Query: 121 SENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E + ++ ++ DFYELG+G P  +SA +G+G+++ +E  L  + P       K+      
Sbjct: 121 AEGMKHTVVAADFYELGLGEPFPVSATHGDGVRDLVEMALA-DFPEPDEDDAKD------ 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            E  +VAIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I   FE N +KY LIDTAG
Sbjct: 174 -ETPRVAIVGRPNVGKSTLINALMGEERVIAFDMPGTTRDAIFVDFERNGRKYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE +EKFSV+KTL+SI +ANVV+L+LDA Q+IS QD +IA F+ ESGRSL+V 
Sbjct: 233 LRRRGKVFEAVEKFSVVKTLQSIEDANVVVLVLDADQDISDQDAHIAGFVVESGRSLVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWDS+   +R+ IK +++ KL FLSFA F++ISA+K   +     S++  Y +++  L
Sbjct: 293 VNKWDSLDAYRRERIKVDLEHKLKFLSFATFHYISALKGLGLEKLFTSVDRAYAAAMAKL 352

Query: 360 STSRITRALISAI-KNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
            T ++TR L+ A+ +  PP    + RPKLRYAHQGG NPP+IVIHGN L  +   Y+RYL
Sbjct: 353 PTPKLTRVLLDAVARQAPPRHGGIFRPKLRYAHQGGSNPPLIVIHGNALDSLPESYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F   F L
Sbjct: 413 EHTFREVFKL 422


>gi|409406680|ref|ZP_11255142.1| Fe-S-cluster redox enzyme protein [Herbaspirillum sp. GW103]
 gi|386435229|gb|EIJ48054.1| Fe-S-cluster redox enzyme protein [Herbaspirillum sp. GW103]
          Length = 390

 Score =  491 bits (1264), Expect = e-135,   Method: Composition-based stats.
 Identities = 222/339 (65%), Positives = 277/339 (81%), Gaps = 1/339 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FGVSDF++MTDL+ SLR KLK    ++AP I+SD  S DGTR
Sbjct: 22  ELGEKPFRAKQLQRWIHQFGVSDFDQMTDLAKSLRDKLKTRAEVRAPAIISDHTSTDGTR 81

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETVFIPE+NR TLC+STQ GCA+NC FCSTG+QGF RNLTV EIIGQL
Sbjct: 82  KWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRFCSTGKQGFNRNLTVAEIIGQL 141

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LR+ K I+   +G+RQITN+VMMGMGEPLLN+  T+ AL+L+L D+AYGLSRR 
Sbjct: 142 WMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFDPTVTALRLMLDDNAYGLSRRR 201

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMIDKL+QECPV LAVSLHASN+ LR+ L+P+++K+PL+EL+LAC RY+ +
Sbjct: 202 VTLSTSGVVPMIDKLSQECPVALAVSLHASNDALRDSLIPLNRKHPLRELMLACKRYLEF 261

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+NDTD HA EL++L+++ +    CK NLIPFN FP S L  S N 
Sbjct: 262 APRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPCKFNLIPFNPFPESGLKRSHNP 321

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RIK FA+ILM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 322 RIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 360


>gi|56476106|ref|YP_157695.1| GTP-binding protein EngA [Aromatoleum aromaticum EbN1]
 gi|81821192|sp|Q5P7B7.1|DER_AZOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|56312149|emb|CAI06794.1| GTP-binding protein engA [Aromatoleum aromaticum EbN1]
          Length = 442

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 313/429 (72%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G + ++++DT GF
Sbjct: 1   MKPTIVLVGRPNVGKSTLFNRLTKTRDALVADQPGLTRDRHYGIGRVGDRDYLVVDTAGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +P  K GIMHEM +Q +QAI E+D ++F+VDGR GL   D+ I   LR++G+P+ LV+NK
Sbjct: 61  DPVAKDGIMHEMARQAEQAIAEADALLFMVDGRSGLTPHDEQIAARLRRAGRPVYLVVNK 120

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE +  + ++ +F+ LG+G+P  +SA +G G+K  L+ +L    P  +  + +  T    
Sbjct: 121 SEGMERTMVAAEFHALGLGDPLPVSASHGEGVKQLLDLVLGAFPPDVEPEEDEGRTP--- 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++AIVG+PNVGKST +NSLLGE RVI +D PGTTRD+I   FE + + Y LIDTAG
Sbjct: 178 ----RIAIVGRPNVGKSTFVNSLLGEERVIAFDMPGTTRDAIAIPFERDGRHYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE +EKFSVIKTL++I +ANVV+L+LDA Q+IS QD +IA FI E+GR+L+V 
Sbjct: 234 LRRRGKVFEAVEKFSVIKTLQAIEQANVVVLVLDASQDISDQDAHIAGFILEAGRALVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   +R++IK ++ +KLNFLSFA F++ISA+K   + + M+S++  Y +++++L
Sbjct: 294 VNKWDDVDDYRRELIKQDLTRKLNFLSFARFHYISALKGAGVAAVMKSVDAAYAAAMVNL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST R+TR + +A+    P R  + RPK+RYAHQGG NPP++VIHG  L ++   Y RYLE
Sbjct: 354 STPRLTRTMQAALAKQAPPRHGVFRPKMRYAHQGGNNPPVVVIHGAALDHVPTSYVRYLE 413

Query: 420 KYFYRTFSL 428
           + F   F L
Sbjct: 414 RTFMEAFKL 422


>gi|114332129|ref|YP_748351.1| GTP-binding protein EngA [Nitrosomonas eutropha C91]
 gi|122313190|sp|Q0AE46.1|DER_NITEC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|114309143|gb|ABI60386.1| small GTP-binding protein [Nitrosomonas eutropha C91]
          Length = 468

 Score =  488 bits (1255), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 313/429 (72%), Gaps = 6/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP LVLVGRPNVGKSTLFNRLT SRDA+VA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTLVLVGRPNVGKSTLFNRLTRSRDAIVADIPGLTRDRHYGHGRLGLKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK GI+H M +QT QA+ E+D+++FIVDGRQGL  QDK+I + LRK+G+ I+LV+NK
Sbjct: 61  EPVVKSGILHAMARQTLQAVDEADVVLFIVDGRQGLASQDKIIADQLRKTGRKIILVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+ +++F+ELG+G P ++SAL+G  +   ++  L  + PY +  + +     H 
Sbjct: 121 AEGMPYSTAAVEFHELGLGTPCVVSALHGEHLGELIDFALE-DYPYAEDIEAEPGQEKHP 179

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +    +AI G+PNVGKSTLIN+LLGE R+I +D PGTTRDSI   FEY  ++Y LIDTAG
Sbjct: 180 V----IAIAGRPNVGKSTLINTLLGEERMIAFDQPGTTRDSIYIDFEYGQRRYTLIDTAG 235

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR  K +E +EKFSV+KTL+SI  ANVV+L+LDAQ  IS QD +IA FI E+GR+L++ 
Sbjct: 236 LRRSGKVWETVEKFSVVKTLQSIEAANVVVLVLDAQSGISEQDAHIAGFILETGRALVIA 295

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   QR   K   ++KL FL+FA  ++ISA+  N + + M S++  Y +++ H+
Sbjct: 296 INKWDGMDDYQRDTTKREFERKLAFLNFANLHYISALYGNGVKALMPSVDAAYTAAMAHI 355

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR +++A+    P R  + RPKLRYAHQGG+NPP+I++HG+ L ++   Y+RYLE
Sbjct: 356 PTPKLTRVMLAAVAKQQPPRGGVSRPKLRYAHQGGENPPLIIVHGSMLDHVPQTYRRYLE 415

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 416 NTFRDVFEL 424


>gi|325981901|ref|YP_004294303.1| ribosome-associated GTPase EngA [Nitrosomonas sp. AL212]
 gi|325531420|gb|ADZ26141.1| ribosome-associated GTPase EngA [Nitrosomonas sp. AL212]
          Length = 464

 Score =  488 bits (1255), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/429 (52%), Positives = 315/429 (73%), Gaps = 10/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP LVLVGRPNVGKSTLFNRLT +RDA+VA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTLVLVGRPNVGKSTLFNRLTRTRDAIVADIPGLTRDRHYGAGRVGDKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP +K+G+++ M KQT QAI E+D ++FIVDGRQGL   DK+I   LRKSGQ I+LV+NK
Sbjct: 61  EPVIKEGVLYAMAKQTIQAIDEADKVLFIVDGRQGLTAHDKIIAEQLRKSGQKILLVVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E + +++ + +F+ELG+G+P  +SA++G+ I   L ++   + P        E     +
Sbjct: 121 TEGMTTTVVTAEFFELGLGDPCAVSAMHGDNIHE-LADLALADFP--------EVVEESA 171

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++ K+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRDSI   F + +K+Y LIDTAG
Sbjct: 172 SKHPKIAIVGRPNVGKSTLINTLLGEERVIAFDQPGTTRDSIYVDFTHKDKQYTLIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  E IEKFS IKTL++I +ANVV+L+LDA+  IS QD +IA FI E+GR+L++ 
Sbjct: 232 LRRRGQVHETIEKFSAIKTLQAIEDANVVVLILDARNEISDQDAHIAGFILETGRALVIA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   QR  IK+++ +KL FLSFA  ++ISA+    +   + SI+  Y +++  L
Sbjct: 292 INKWDGLDEYQRATIKSDLSRKLAFLSFAQLHYISALHGTGMKKLLPSIDIAYAAAMADL 351

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR LI+A++ HPP R  + RPK+RYAHQGG NPP+I++HG+ L ++   Y+RYLE
Sbjct: 352 PTPKLTRVLIAAVEKHPPPRGGMSRPKMRYAHQGGSNPPLIIVHGSMLNHVPETYRRYLE 411

Query: 420 KYFYRTFSL 428
             F  TF L
Sbjct: 412 NTFRETFKL 420


>gi|348590095|ref|YP_004874557.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
 gi|347973999|gb|AEP36534.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
          Length = 459

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/442 (53%), Positives = 320/442 (72%), Gaps = 21/442 (4%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR+A+VA+Y GLTRDRHYGEG +G + F++IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRVGDRPFLVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
           P+VK GIM EM +QT+ AI ESD++IF+VD R G+   D  I   LRK G P++L +NK+
Sbjct: 64  PKVKTGIMKEMARQTELAISESDVVIFLVDARSGINAHDHEIAVKLRKVGVPVILAVNKA 123

Query: 122 ENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS- 179
           E + +S  S +F+ELG+G P  IS+ +G+G+ N +E  L+      K  + ++ T+I S 
Sbjct: 124 EGLQASQASAEFHELGLGEPLAISSAHGDGVANLIEVALS------KIPQVEDETSISSE 177

Query: 180 ---------IEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
                     E+    IK+A+VG+PNVGKSTLINSLLGE RVI +D PGTTRD+I+  FE
Sbjct: 178 DEVDSDSNETEFKDHRIKLAVVGRPNVGKSTLINSLLGEQRVIAFDMPGTTRDAIEIDFE 237

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N KKY LIDTAG+R+R K FE IEKFSVIKTL++I   NVV+L+LDAQ  IS QD +IA
Sbjct: 238 SNGKKYKLIDTAGLRKRGKVFESIEKFSVIKTLQAIEACNVVVLILDAQSEISEQDAHIA 297

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            FI ESGR+L+V +NKWD +  ++R+ +   +++KL FLSFA  ++ISA+K   I S ++
Sbjct: 298 GFILESGRALVVAINKWDGLSEDKREWVIRELERKLRFLSFAKVHYISALKAYGIKSLLK 357

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+N  ++++   L+T ++TR L SA++  PP RK + RPK+RYAHQGG+NPP+++IHGN 
Sbjct: 358 SVNQAHEAAFRKLATPKLTRELQSAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNA 417

Query: 407 LKYIGNDYKRYLEKYFYRTFSL 428
           L  I + Y+RYLE  F + F L
Sbjct: 418 LDAIPDSYRRYLEARFRKVFKL 439


>gi|30248179|ref|NP_840249.1| GTP-binding protein EngA [Nitrosomonas europaea ATCC 19718]
 gi|37999533|sp|Q82XU6.1|DER_NITEU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|30180064|emb|CAD84064.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily
           [Nitrosomonas europaea ATCC 19718]
          Length = 467

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 234/429 (54%), Positives = 311/429 (72%), Gaps = 6/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP LVLVGRPNVGKSTLFNRLT SRDA+VA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTLVLVGRPNVGKSTLFNRLTRSRDAIVADIPGLTRDRHYGHGRLGLKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK GI+H M KQT QA+ E+DI++FIVDGRQGL  QDK+I   LRK+GQ I+LV+NK
Sbjct: 61  EPVVKSGILHAMAKQTLQAVDEADIVLFIVDGRQGLAAQDKIIAEQLRKTGQKIILVVNK 120

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  SS++ +F+ELG+G P  +SAL+G+ +   ++  L    PY++    +       
Sbjct: 121 TEGMPYSSVTAEFHELGLGTPCAVSALHGDHLGELIDFALE-GYPYEEETAAEPGQEKCP 179

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +    +AI G+PNVGKSTLIN+LLGE RVI +D PGTTRDSI   FEY  + Y LIDTAG
Sbjct: 180 V----IAIAGRPNVGKSTLINTLLGEERVIAFDQPGTTRDSIYVDFEYGQRSYTLIDTAG 235

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR  K +E +EKFSV+KTL+SI  ANVVIL+LDA   IS QD +IA FI E+GRSL+V 
Sbjct: 236 LRRSGKVWETVEKFSVVKTLQSIEAANVVILVLDAHHEISDQDAHIAGFILETGRSLVVA 295

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   QR+IIK   ++KL FLSFA  ++ISA+  N +   M S++  Y ++  H+
Sbjct: 296 INKWDGLDDYQREIIKREFERKLGFLSFANLHYISALYGNGVKGLMPSVDAAYAAARAHI 355

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRA+++A+    P R  + RPKLRYAHQGG+NPP+I++HG+ L+++   Y+RYLE
Sbjct: 356 PTPKLTRAMLAAVAKQQPPRGGMSRPKLRYAHQGGENPPLIIVHGSMLEHVPQTYRRYLE 415

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 416 NTFREVFKL 424


>gi|300312259|ref|YP_003776351.1| Fe-S-cluster redox enzyme protein [Herbaspirillum seropedicae SmR1]
 gi|300075044|gb|ADJ64443.1| Fe-S-cluster redox enzyme protein [Herbaspirillum seropedicae SmR1]
          Length = 390

 Score =  486 bits (1252), Expect = e-134,   Method: Composition-based stats.
 Identities = 219/339 (64%), Positives = 277/339 (81%), Gaps = 1/339 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FGV+DF++MTDL+ SLR KLK    ++AP I+SD  S DGTR
Sbjct: 22  ELGEKPFRAKQLQRWIHQFGVADFDQMTDLAKSLRDKLKTRAEVRAPAIISDHTSTDGTR 81

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETVFIPE+NR TLC+STQ GCA+NC FCSTG+QGF RNL+V EIIGQL
Sbjct: 82  KWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRFCSTGKQGFNRNLSVAEIIGQL 141

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LR+ K I+   +G+RQITN+VMMGMGEPLLN++ T+ AL+L+L D+AYGLSRR 
Sbjct: 142 WMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFEPTVTALRLMLDDNAYGLSRRR 201

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMI KL+QECPV LAVSLHASN+ LR+ L+P+++K+PL+EL+LAC RY+ +
Sbjct: 202 VTLSTSGVVPMIGKLSQECPVALAVSLHASNDALRDSLIPLNRKHPLRELMLACKRYLEF 261

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+NDTD HA EL++L+++ +    CK NLIPFN FP S L  S N 
Sbjct: 262 APRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPCKFNLIPFNPFPESGLKRSHNP 321

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RIK FA+ILM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 322 RIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 360


>gi|329912290|ref|ZP_08275720.1| hypothetical protein IMCC9480_747 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545652|gb|EGF30807.1| hypothetical protein IMCC9480_747 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 388

 Score =  486 bits (1251), Expect = e-134,   Method: Composition-based stats.
 Identities = 222/342 (64%), Positives = 273/342 (79%), Gaps = 1/342 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FG SDF  MTDL+ SLR KL     +++P ++SD  S DGTR
Sbjct: 20  ELGEKPFRAKQLQRWIHQFGASDFTAMTDLAKSLRDKLATRAVVQSPAVISDHTSTDGTR 79

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETVFIPE+NR TLCISTQ GCA+NC FCSTG+QGF RNLTVGEIIGQL
Sbjct: 80  KWLLDVGQGNAVETVFIPEENRGTLCISTQAGCAVNCRFCSTGKQGFNRNLTVGEIIGQL 139

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LR+ K I+   +G+RQITN+VMMGMGEPLLNY+ T+ ALKL+L D+AYGLSRR 
Sbjct: 140 WMAEFELRKTKGIEPGPKGERQITNVVMMGMGEPLLNYEPTVTALKLMLDDNAYGLSRRR 199

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++P IDKL Q+CPV LAVSLHASN+ LR+ LVP++KKYPLKEL+ AC RY+ +
Sbjct: 200 VTLSTSGVVPNIDKLGQDCPVALAVSLHASNDALRDSLVPLNKKYPLKELMAACVRYLEF 259

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEYCML G+NDT+ HA EL++L+R    L  CK NLIPFN FP S L  S N 
Sbjct: 260 APRDFVTFEYCMLDGVNDTEQHARELVALVRHGAQLVPCKFNLIPFNPFPESGLTRSNNP 319

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
           +IK+FA++LM++GI  TIRK RG+DI+AACGQL+GE  D  K
Sbjct: 320 QIKLFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGEVQDRTK 361


>gi|399116777|emb|CCG19586.1| GTPp-binding protein EngA [Taylorella asinigenitalis 14/45]
          Length = 459

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/442 (53%), Positives = 319/442 (72%), Gaps = 21/442 (4%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR+A+VA+Y GLTRDRHYGEG +G + F++IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRVGDRPFLVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
           P+VK GIM EM +QT+ AI ESD++IF+VD R G+   D  I   LRK G P++L +NK+
Sbjct: 64  PKVKTGIMKEMARQTELAISESDVVIFLVDTRSGINAHDHEIAVKLRKVGVPVILAVNKA 123

Query: 122 ENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS- 179
           E + +S  S +F+ELG+G P  IS+ +G+G+ N +E  L+      K  + ++ T+I S 
Sbjct: 124 EGLQASQASAEFHELGLGEPLAISSAHGDGVANLIEAALS------KIPQVEDETSISSE 177

Query: 180 ---------IEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
                     E+    IK+A+VG+PNVGKSTLINSLLGE RVI +D PGTTRD+I+  FE
Sbjct: 178 DEVDSESNETEFKDHRIKLAVVGRPNVGKSTLINSLLGEQRVIAFDMPGTTRDAIEIDFE 237

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N KKY LIDTAG+R+R K FE IEKFSVIKTL++I   NVV+L+LDAQ  IS QD +IA
Sbjct: 238 SNGKKYKLIDTAGLRKRGKVFESIEKFSVIKTLQAIEACNVVVLILDAQSEISEQDAHIA 297

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            FI ESGR+L+V +NKWD +  ++R+ +    ++KL FLSFA  ++ISA+K   I S ++
Sbjct: 298 GFILESGRALVVAINKWDGLSEDKREWVIREFERKLRFLSFAKVHYISALKAYGIKSLLK 357

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+N  ++++   L+T ++TR L SA++  PP RK + RPK+RYAHQGG+NPP+++IHGN 
Sbjct: 358 SVNQAHEAAFRKLATPKLTRELQSAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNA 417

Query: 407 LKYIGNDYKRYLEKYFYRTFSL 428
           L  I + Y+RYLE  F + F L
Sbjct: 418 LDAIPDSYRRYLEARFRKVFKL 439


>gi|74316616|ref|YP_314356.1| GTP-binding protein EngA [Thiobacillus denitrificans ATCC 25259]
 gi|123773049|sp|Q3SL66.1|DER_THIDA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|74056111|gb|AAZ96551.1| GTP-binding protein [Thiobacillus denitrificans ATCC 25259]
          Length = 469

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 226/429 (52%), Positives = 310/429 (72%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P LVLVGRPNVGKSTLFNRLT +RDALV + PG+TRDRHYG G IG K ++++DTGG 
Sbjct: 1   MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPGMTRDRHYGRGRIGGKPYLVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP VK GI+ EM +QT QAI E+D IIF+VD R G+  QDK+I + LR+   P++L +NK
Sbjct: 61  EPVVKDGILAEMARQTLQAIDEADAIIFMVDARAGVTPQDKVIADRLRRVTSPVLLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +N ++ + +F+ELG+G P  IS  +G+GI + +   L        F +++E ++   
Sbjct: 121 AEGMNRAVVTAEFHELGLGEPLAISGAHGDGIADLVAEALA------PFPEEEEASDDFG 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +   K+A+VG+PNVGKSTL+N+L+G  RVI +D PGTTRDSI   FE   K Y+LIDTAG
Sbjct: 175 VP--KIALVGRPNVGKSTLVNALVGAERVIAFDQPGTTRDSIYVDFERGGKPYVLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE +EKFSVIKTL++I +ANVV+L+LDA++NIS QD ++A F+ E+GR+L+V 
Sbjct: 233 VRRRGKVFETVEKFSVIKTLQAIEDANVVVLVLDARENISEQDAHLAGFVLETGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   QR  +K +I +KL FL FA FN+ISA+K   + + ++ I   + ++ I L
Sbjct: 293 INKWDGLSAEQRDDVKRDIGRKLAFLDFARFNYISALKAKGLENLLKDIEAAHAAAFIKL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L  A++ H P +  L RPK RYAHQGGKNPP+IV+HGN L+ + +DYKRYLE
Sbjct: 353 STPKLTRVLEMAVEQHAPPKNGLFRPKPRYAHQGGKNPPVIVLHGNALEGLRDDYKRYLE 412

Query: 420 KYFYRTFSL 428
             F + F L
Sbjct: 413 SSFRKAFKL 421


>gi|445498333|ref|ZP_21465188.1| ribosomal RNA large subunit methyltransferase N [Janthinobacterium
           sp. HH01]
 gi|444788328|gb|ELX09876.1| ribosomal RNA large subunit methyltransferase N [Janthinobacterium
           sp. HH01]
          Length = 399

 Score =  485 bits (1249), Expect = e-134,   Method: Composition-based stats.
 Identities = 223/342 (65%), Positives = 275/342 (80%), Gaps = 1/342 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FG SDF+ MTDL+ SLR KLK   ++ AP I+SD  S DGTR
Sbjct: 31  ELGEKPFRAKQLQRWIHQFGASDFDSMTDLAKSLRDKLKTRAHVTAPAIISDHTSTDGTR 90

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE+NR TLCISTQ GCA+NC FCSTG+QGF RNL+VGEIIGQL
Sbjct: 91  KWLVDVGNGNAVETVFIPEENRGTLCISTQAGCAVNCRFCSTGKQGFSRNLSVGEIIGQL 150

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LRR K I+   +G+RQITN+VMMGMGEPLLN++ T  ALKL+L D+AYGLSRR 
Sbjct: 151 WMAEFELRRTKGIEPGPKGERQITNVVMMGMGEPLLNFEPTATALKLMLDDNAYGLSRRR 210

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+DKL+QE PV LAVSLHASN+ LR+ L+P++KKYPLKEL+ AC RY+ +
Sbjct: 211 VTLSTSGVVPMMDKLSQEVPVALAVSLHASNDKLRDSLIPLNKKYPLKELMAACKRYLEF 270

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND+D +A EL++L++  +   +CK NLIPFN FP S L+ SKN 
Sbjct: 271 APRDFITFEYCMLDGVNDSDENARELLALVQDREFGVNCKFNLIPFNPFPESGLLRSKNP 330

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
           RIK FA+IL++ GI  TIRK RG+DI+AACGQL+GE  D  K
Sbjct: 331 RIKAFAQILVDGGIVTTIRKTRGDDIDAACGQLAGEVQDRTK 372


>gi|395763293|ref|ZP_10443962.1| hypothetical protein JPAM2_16292 [Janthinobacterium lividum PAMC
           25724]
          Length = 391

 Score =  484 bits (1247), Expect = e-133,   Method: Composition-based stats.
 Identities = 221/339 (65%), Positives = 273/339 (80%), Gaps = 1/339 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FG SDF+ MTDL+ SLR KL     ++AP I+SD  S DGTR
Sbjct: 23  ELGEKPFRAKQLQRWIHQFGASDFDAMTDLAKSLRDKLATRAEVRAPAIISDHTSTDGTR 82

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE+NR TLCISTQ GCA+NC FCSTG+QGF RNL+VGEIIGQL
Sbjct: 83  KWLVDVGNGNAVETVFIPEENRGTLCISTQAGCAVNCRFCSTGKQGFNRNLSVGEIIGQL 142

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LRR K I+   +G+RQITN+VMMGMGEPLLN++ T+ ALKL+L D+AYGLSRR 
Sbjct: 143 WMAEFELRRTKGIEPGPKGERQITNVVMMGMGEPLLNFEPTVTALKLMLDDNAYGLSRRR 202

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+DKL+QE PV LAVSLHASN+ LR+ L+P++KKYPLKEL+ AC RY+ +
Sbjct: 203 VTLSTSGVVPMMDKLSQEVPVALAVSLHASNDVLRDGLIPLNKKYPLKELMAACKRYLEF 262

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND+D HA EL++L++  +   +CK NLIPFN FP S L  SKN 
Sbjct: 263 APRDFITFEYCMLDGVNDSDEHARELLALVQDREFGVNCKFNLIPFNPFPESGLFRSKNP 322

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RIK FA++LM+ GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 323 RIKAFAQVLMDGGIITTVRKTRGDDIDAACGQLAGEVKD 361


>gi|398836190|ref|ZP_10593536.1| 23S rRNA methyltransferase [Herbaspirillum sp. YR522]
 gi|398213194|gb|EJM99788.1| 23S rRNA methyltransferase [Herbaspirillum sp. YR522]
          Length = 390

 Score =  483 bits (1244), Expect = e-133,   Method: Composition-based stats.
 Identities = 218/339 (64%), Positives = 274/339 (80%), Gaps = 1/339 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FGV DF++MTDL+ SLR KLK    ++AP I+SD  S DGTR
Sbjct: 22  ELGEKPFRAKQLQRWIHQFGVGDFDQMTDLAKSLRDKLKTRAEVRAPAIISDHTSADGTR 81

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +E VFIPE+NR TLC+STQ GCA+NC FCSTG+QGF RNLTV EIIGQL
Sbjct: 82  KWLVDVGQGNAVEAVFIPEENRGTLCVSTQAGCAVNCRFCSTGKQGFNRNLTVAEIIGQL 141

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LRR K ++   +G+RQITN+VMMGMGEPLLN++ T+ AL+L+L D+AYGLSRR 
Sbjct: 142 WMAEFELRRTKGVEPGPKGERQITNVVMMGMGEPLLNFEPTVTALRLMLDDNAYGLSRRR 201

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMID+L+QECPV LAVSLHASN+ LR+ L+P+++K+PL+EL+ AC RY+ +
Sbjct: 202 VTLSTSGVVPMIDRLSQECPVALAVSLHASNDALRDSLIPLNRKHPLRELMAACKRYLEF 261

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND+D++A ELI L+ +     SCK NLIPFN FP S L  S N 
Sbjct: 262 APRDFITFEYCMLDGVNDSDVNARELIELVTQGDTAISCKFNLIPFNPFPESGLKRSHNP 321

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RIK FA+ILM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 322 RIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 360


>gi|224826453|ref|ZP_03699555.1| small GTP-binding protein [Pseudogulbenkiania ferrooxidans 2002]
 gi|224601554|gb|EEG07735.1| small GTP-binding protein [Pseudogulbenkiania ferrooxidans 2002]
          Length = 463

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 228/429 (53%), Positives = 310/429 (72%), Gaps = 10/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGHGRVGDKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V +GI+ EM +QT QA+ E+D I+F+VDGR G+  QDK+I N LR++ +P+ LV+NK
Sbjct: 61  EPVVDEGILFEMARQTLQAVDEADAIVFLVDGRTGITPQDKIIANRLRQNDRPVFLVVNK 120

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E I+ SI+  +F+EL +G P  ISA +G+G++  +E +L    P+     +KE      
Sbjct: 121 AEGISQSIAGAEFHELALGEPLAISAAHGDGVRELMEMVLE---PFPAATDEKE------ 171

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           + + K A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE ++  Y +IDTAG
Sbjct: 172 VRHPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFERDDHTYTIIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E IEKFSVIKT+K+I +ANV +L+LDAQ +IS QD  IA F  E+GR+L+V 
Sbjct: 232 VRRRGKVNETIEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD+I   Q++++K+ I +KL FL FA F+FISAI+   I    +SI+  Y ++++ L
Sbjct: 292 VNKWDNIDTEQKELVKHEIARKLGFLDFAKFHFISAIEGRGIADLFKSIDEAYRAAMVKL 351

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T ++TR L  A++   P R   +RPK+RYAHQGG NPPIIVIHGN L  + + Y RYLE
Sbjct: 352 ATPKLTRVLEVAVERQAPPRVGQVRPKMRYAHQGGMNPPIIVIHGNALAKVPDSYTRYLE 411

Query: 420 KYFYRTFSL 428
             F + F L
Sbjct: 412 HTFRKVFKL 420


>gi|349575218|ref|ZP_08887139.1| ribosome-associated GTPase EngA [Neisseria shayeganii 871]
 gi|348013226|gb|EGY52149.1| ribosome-associated GTPase EngA [Neisseria shayeganii 871]
          Length = 487

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 220/429 (51%), Positives = 310/429 (72%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGRVGSKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSPRPVFLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E  N ++ + +FYEL +G P++IS  +G+G+ + +E+IL       +F   +E     S
Sbjct: 121 AEGGNQAVLAAEFYELALGEPYVISGAHGDGVYDLMEDILG------RFPDAEE--EGES 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE + + + +IDTAG
Sbjct: 173 AKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERHGRPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVEEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ IK +I +KL FL FA F++ISA+K   I+   +SI   YD+++I++
Sbjct: 293 VNKWDGIDEERREQIKRDIARKLYFLDFARFHYISALKEKGIDGLFDSIQAAYDAAMINM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SA++   P R  L+RPK+RYAHQGG NPP+IV+HGN L++I + Y RYL 
Sbjct: 353 PTPKITRVLQSAVERQAPPRAGLVRPKMRYAHQGGMNPPVIVVHGNALQHISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|347540915|ref|YP_004848340.1| GTP-binding protein EngA [Pseudogulbenkiania sp. NH8B]
 gi|345644093|dbj|BAK77926.1| GTP-binding protein EngA [Pseudogulbenkiania sp. NH8B]
          Length = 463

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 228/429 (53%), Positives = 309/429 (72%), Gaps = 10/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGHGRVGDKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V +GI+ EM +QT QA+ E+D I+F+VDGR G+  QDK+I N LR++ +P+ LV+NK
Sbjct: 61  EPVVDEGILFEMARQTLQAVDEADAIVFLVDGRTGITPQDKIIANRLRQNDRPVFLVVNK 120

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E I+ SI+  +F+EL +G P  ISA +G+G++  +E +L    P+     +KE      
Sbjct: 121 AEGISQSIAGAEFHELALGEPLAISAAHGDGVRELMEMVLE---PFPAATDEKE------ 171

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           + + K A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE ++  Y +IDTAG
Sbjct: 172 VRHPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFERDDHTYTIIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E IEKFSVIKT+K+I +ANV +L+LDAQ +IS QD  IA F  E+GR+L+V 
Sbjct: 232 VRRRGKVNETIEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD+I   Q++++K  I +KL FL FA F+FISAI+   I    +SI+  Y ++++ L
Sbjct: 292 VNKWDNIDTEQKELVKREIARKLGFLDFAKFHFISAIEGRGIADLFKSIDEAYRAAMVKL 351

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T ++TR L  A++   P R   +RPK+RYAHQGG NPPIIVIHGN L  + + Y RYLE
Sbjct: 352 ATPKLTRVLEVAVERQAPPRVGQVRPKMRYAHQGGMNPPIIVIHGNALTKVPDSYTRYLE 411

Query: 420 KYFYRTFSL 428
             F + F L
Sbjct: 412 HTFRKVFKL 420


>gi|350571830|ref|ZP_08940146.1| ribosome-associated GTPase EngA [Neisseria wadsworthii 9715]
 gi|349791015|gb|EGZ44908.1| ribosome-associated GTPase EngA [Neisseria wadsworthii 9715]
          Length = 486

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 307/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVADMPGLTRDRHYGHGKVGSKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM K T QAI E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKHTLQAIDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVFLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N S+ + +FYEL +G+P+++S  +G+G+   +E++L      +KF   +E   I  
Sbjct: 121 GEGANRSVLAAEFYELALGDPYVVSGAHGDGVYGLIEDVL------EKFPHAEETEEI-- 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 173 AKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  +NV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVEEAVEKFSVIKAMQAVEASNVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I  +++  IK +I +KL FL FA F++ISA+K   I+    SI   YD+++I +
Sbjct: 293 VNKWDDIDEDRKAQIKRDIARKLYFLDFAKFHYISALKEKGIDGLFASIQAAYDAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IVIHGN L++I   Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQAPPRAGLVRPKMRYAHQGGMNPPVIVIHGNALQHIPEAYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|399114892|emb|CCG17688.1| GTPp-binding protein EngA [Taylorella equigenitalis 14/56]
          Length = 452

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/434 (53%), Positives = 317/434 (73%), Gaps = 12/434 (2%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR+A+VA+Y GLTRDRHYGEG IG + F++IDTGGFE
Sbjct: 4   KPVIALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRIGDRPFLVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
           P+VK GI+ EM +QT+ AI ESD++IF+VD R G+  QD  I   LRK G P++L +NK+
Sbjct: 64  PKVKTGILKEMARQTELAISESDVVIFLVDARSGINAQDHDIATKLRKVGVPVLLAVNKA 123

Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF------KKKEF 174
           E +  +  + +F+ELG+G P  IS+ +G+G+ N ++  L+ ++P  +          +EF
Sbjct: 124 EGLQPNQANAEFHELGLGEPLAISSAHGDGVANLIDIALS-KIPQSEEELNSEPDADREF 182

Query: 175 TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYIL 234
           T+      IK+AIVG+PNVGKSTLINSL+GE RVI +D PGTTRD+I+  FE+NNKKY L
Sbjct: 183 TD----HKIKLAIVGRPNVGKSTLINSLIGEQRVIAFDLPGTTRDAIEIDFEHNNKKYKL 238

Query: 235 IDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR 294
           IDTAG+R+R + FE IEKFSVIKTL++I   NVV+L+LDAQ  IS QD +IA FI ESGR
Sbjct: 239 IDTAGLRKRGRVFESIEKFSVIKTLQAIEACNVVVLVLDAQSEISEQDAHIAGFILESGR 298

Query: 295 SLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
           +L+V +NKWD +  ++R  +    ++KL FLSFA  +FISA+K   I S ++S+N  +++
Sbjct: 299 ALVVAINKWDGLDEDKRDWVIREFERKLRFLSFAKVHFISALKSQGIKSLLKSVNLAHEA 358

Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
           +   L T ++TR L +A+   PP RK + RPK+RYAHQGG+NPP+++IHGN L  I + Y
Sbjct: 359 AFRKLPTPKLTRELQAAVDQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNALDAIPDSY 418

Query: 415 KRYLEKYFYRTFSL 428
           +RYLE  F + F L
Sbjct: 419 RRYLETRFRKAFKL 432


>gi|319779671|ref|YP_004130584.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9]
 gi|397661898|ref|YP_006502598.1| GTPp-binding protein EngA [Taylorella equigenitalis ATCC 35865]
 gi|317109695|gb|ADU92441.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9]
 gi|394350077|gb|AFN35991.1| GTPp-binding protein EngA [Taylorella equigenitalis ATCC 35865]
          Length = 452

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/434 (53%), Positives = 317/434 (73%), Gaps = 12/434 (2%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR+A+VA+Y GLTRDRHYGEG IG + F++IDTGGFE
Sbjct: 4   KPVIALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRIGDRPFLVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
           P+VK GI+ EM +QT+ AI ESD++IF+VD R G+  QD  I   LRK G P++L +NK+
Sbjct: 64  PKVKTGILKEMARQTELAISESDVVIFLVDARSGINAQDHDIATKLRKVGVPVLLAVNKA 123

Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF------KKKEF 174
           E +  +  + +F+ELG+G P  IS+ +G+G+ N ++  L+ ++P  +          +EF
Sbjct: 124 EGLQPNQANAEFHELGLGEPLAISSAHGDGVANLIDIALS-KIPQSEEELNSEPDADQEF 182

Query: 175 TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYIL 234
           T+      IK+AIVG+PNVGKSTLINSL+GE RVI +D PGTTRD+I+  FE+NNKKY L
Sbjct: 183 TD----HKIKLAIVGRPNVGKSTLINSLIGEQRVIAFDLPGTTRDAIEIDFEHNNKKYKL 238

Query: 235 IDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR 294
           IDTAG+R+R + FE IEKFSVIKTL++I   NVV+L+LDAQ  IS QD +IA FI ESGR
Sbjct: 239 IDTAGLRKRGRVFESIEKFSVIKTLQAIEACNVVVLVLDAQSEISEQDAHIAGFILESGR 298

Query: 295 SLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
           +L+V +NKWD +  ++R  +    ++KL FLSFA  +FISA+K   I S ++S+N  +++
Sbjct: 299 ALVVAINKWDGLDEDKRDWVIREFERKLRFLSFAKVHFISALKSQGIKSLLKSVNLAHEA 358

Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
           +   L T ++TR L +A+   PP RK + RPK+RYAHQGG+NPP+++IHGN L  I + Y
Sbjct: 359 AFRKLPTPKLTRELQAAVDQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNALDAIPDSY 418

Query: 415 KRYLEKYFYRTFSL 428
           +RYLE  F + F L
Sbjct: 419 RRYLETRFRKAFKL 432


>gi|82703488|ref|YP_413054.1| GTP-binding protein EngA [Nitrosospira multiformis ATCC 25196]
 gi|123768150|sp|Q2Y6F9.1|DER_NITMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|82411553|gb|ABB75662.1| Small GTP-binding protein domain [Nitrosospira multiformis ATCC
           25196]
          Length = 466

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/430 (53%), Positives = 309/430 (71%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP LVLVGR NVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G + ++++DTGGF
Sbjct: 1   MKPTLVLVGRSNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGHGKLGDRPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP   +GI+HEM KQT QAI E+D+++FIVDGR GL  QDK++   LR+SG+  +L +NK
Sbjct: 61  EPMATEGILHEMAKQTLQAIDEADVVLFIVDGRSGLTAQDKIVAEQLRRSGRRTLLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S+ + +F+ELG+G P  ISA +G+ + N L  +   + P +   ++K+      
Sbjct: 121 TEGMAVSVVTAEFHELGLGEPCAISAAHGDNV-NELVTLALQDFPDEPEQERKD------ 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++ K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI   FE N + Y LIDTAG
Sbjct: 174 -DHPKIAIVGRPNVGKSTLVNTLLGEERVIAFDQPGTTRDSIYIDFERNGRTYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSV+KTL++I +ANVVIL+LDA   IS QD +I  FI E+GR+L++ 
Sbjct: 233 LRRRGKVQETVEKFSVVKTLQAIEDANVVILVLDAASEISDQDAHIGGFILEAGRALVLA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLS-FAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
           VNKWDS+   QR +IK +I +KL FL  FA F++ISA+        + S++  Y +++ H
Sbjct: 293 VNKWDSLDEYQRDMIKRDINRKLPFLQNFARFHYISALHGTGTKGLLPSVDAAYGAAMAH 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           L T R+TR L++A++  PP R  + RPKLRYAHQGG NPP+I+IHG+ L  +   Y+RYL
Sbjct: 353 LPTPRLTRTLLAAVEKQPPPRAGMSRPKLRYAHQGGSNPPLIIIHGSALNAVPQTYQRYL 412

Query: 419 EKYFYRTFSL 428
           E  F  TF L
Sbjct: 413 ENTFRDTFGL 422


>gi|134094488|ref|YP_001099563.1| hypothetical protein HEAR1261 [Herminiimonas arsenicoxydans]
 gi|205829776|sp|A4G4J9.1|RLMN_HERAR RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|133738391|emb|CAL61436.1| putative Fe-S-cluster redox enzyme [Herminiimonas arsenicoxydans]
          Length = 386

 Score =  482 bits (1240), Expect = e-133,   Method: Composition-based stats.
 Identities = 222/339 (65%), Positives = 271/339 (79%), Gaps = 5/339 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FG SDF+ MTDL+ SLR KLK    I AP ++SD  S DGTR
Sbjct: 22  ELGEKPFRAKQLQRWIHQFGASDFDAMTDLAKSLRDKLKTRAMIAAPAVISDHTSSDGTR 81

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETVFIPE+NR TLCISTQ GCA+NC FCSTG+QGF RNL+VGEIIGQL
Sbjct: 82  KWLIDVGQGNAVETVFIPEENRGTLCISTQAGCAVNCRFCSTGKQGFNRNLSVGEIIGQL 141

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LRR K I+   +G+RQITN+VMMGMGEPLLNY+ T+ ALKL+L D+AYGLSRR 
Sbjct: 142 WMAEFELRRTKGIEPGPKGERQITNVVMMGMGEPLLNYEPTVTALKLMLDDNAYGLSRRR 201

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMIDKL+Q+C V LAVSLHASN+ LR+ LVP++KKYPL+EL+ AC RY+ +
Sbjct: 202 VTLSTSGVVPMIDKLSQDCAVALAVSLHASNDALRDGLVPLNKKYPLQELMAACKRYLEF 261

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEYCML G+ND+D HA EL++L+R       CK NLIPFN FP S L  S N 
Sbjct: 262 APRDFVTFEYCMLDGVNDSDQHARELLTLVRD----VPCKFNLIPFNPFPESGLTRSNNP 317

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RIK FA++LM+ G+  TIRK RG+DI+AACGQL+GE  D
Sbjct: 318 RIKAFAQVLMDGGLVTTIRKTRGDDIDAACGQLAGEVQD 356


>gi|91775967|ref|YP_545723.1| GTP-binding protein EngA [Methylobacillus flagellatus KT]
 gi|91709954|gb|ABE49882.1| Small GTP-binding protein domain [Methylobacillus flagellatus KT]
          Length = 499

 Score =  481 bits (1238), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/429 (53%), Positives = 305/429 (71%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 2   MLPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPGLTRDRHYGRGVVGSKPYLVVDTGGF 61

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+ EM +QT  AI E+D++IF+VDGR GL  QDK+I   LRKS +PI+L +NK
Sbjct: 62  EPLVDSGILKEMARQTLLAIDEADVVIFLVDGRNGLAPQDKVIAERLRKSQRPILLAVNK 121

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +I S +F+ELG+G+P  IS+ +G G+++       +EL  + F +  E      
Sbjct: 122 TEGMQRAIASAEFHELGLGHPLSISSAHGEGVRDL------VELALENFPEPGEEEESQG 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            +  KVAIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI    E N K+Y +IDTAG
Sbjct: 176 NQVPKVAIVGRPNVGKSTLVNALLGEERVIAFDQPGTTRDSIYLDLERNGKRYTIIDTAG 235

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE +EKFSVIKT+++I EANV IL++DAQ+ I+ QD +++ +I +SGR+L+V 
Sbjct: 236 VRRRGKVFEAVEKFSVIKTMQAIEEANVAILVVDAQEGITEQDAHVSAYILDSGRALVVA 295

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  ++R+ IK  I +KL FL FA F++ISA++   +     S++  Y +++  L
Sbjct: 296 VNKWDGLEDDKREWIKREIDRKLQFLDFAKFHYISALRKKGLGELFHSVDAAYKAAMAKL 355

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L  A   H P   K IRPKLRYAHQGG NPPI+VIHGN +  I   Y+RYL 
Sbjct: 356 STPQLTRVLEDATMQHQPPISKGIRPKLRYAHQGGSNPPIVVIHGNHVDGIKESYRRYLA 415

Query: 420 KYFYRTFSL 428
             F + F L
Sbjct: 416 GVFRKAFQL 424


>gi|152980879|ref|YP_001353820.1| hypothetical protein mma_2130 [Janthinobacterium sp. Marseille]
 gi|205829777|sp|A6SZX3.1|RLMN_JANMA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|151280956|gb|ABR89366.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 387

 Score =  481 bits (1237), Expect = e-132,   Method: Composition-based stats.
 Identities = 221/339 (65%), Positives = 272/339 (80%), Gaps = 3/339 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH+FG SDF+ MTDL+ SLR KL     I AP ++SD  S DGTR
Sbjct: 21  ELGEKPFRAKQLQRWIHQFGASDFDAMTDLAKSLRDKLATRAIIAAPAVISDHTSADGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETVFIPE+NR TLCISTQ GCA+NC FCSTG+QGF RNL+VGE+IGQL
Sbjct: 81  KWLVDVGQGNAVETVFIPEENRGTLCISTQAGCAVNCRFCSTGKQGFNRNLSVGEVIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LRR K I+   +G+RQITN+VMMGMGEPLLNY+ T+ ALKL+L D+AYGLSRR 
Sbjct: 141 WMAEFELRRTKGIEPGPKGERQITNVVMMGMGEPLLNYEPTVTALKLMLDDNAYGLSRRR 200

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMIDKL+Q+C V LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ +
Sbjct: 201 VTLSTSGVVPMIDKLSQDCAVALAVSLHASNDALRDGLVPLNKKYPLVELMAACKRYLEF 260

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEYCML G+ND+D HA ELI+L+R+  +   CK NLIPFN FP S L  S N 
Sbjct: 261 APRDFVTFEYCMLDGVNDSDQHARELIALVRQADV--PCKFNLIPFNPFPESGLTRSHNP 318

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RIK FA++LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 319 RIKAFAQVLMDAGIVTTVRKTRGDDIDAACGQLAGEVQD 357


>gi|427401446|ref|ZP_18892518.1| ribosomal RNA large subunit methyltransferase N [Massilia timonae
           CCUG 45783]
 gi|425719555|gb|EKU82487.1| ribosomal RNA large subunit methyltransferase N [Massilia timonae
           CCUG 45783]
          Length = 389

 Score =  481 bits (1237), Expect = e-132,   Method: Composition-based stats.
 Identities = 220/339 (64%), Positives = 274/339 (80%), Gaps = 1/339 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE PFRAKQLQ+WIH+FG SDF+ MTDL+ SLR+KLK+   ++AP I+SD+ + DGTR
Sbjct: 21  DLGEKPFRAKQLQRWIHQFGASDFDSMTDLAKSLREKLKSRAEVRAPAIVSDKTASDGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE+NR TLCISTQ GCA+NC FCSTG+QGF RNLTV EIIGQL
Sbjct: 81  KWLVDVGNGNAVETVFIPEENRGTLCISTQAGCAVNCRFCSTGKQGFNRNLTVAEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LRR K I+   +G+RQITN+VMMGMGEPLLNY+ T+ ALK++L D+AYGLSRR 
Sbjct: 141 WMAEFELRRTKGIEPGPKGERQITNVVMMGMGEPLLNYEPTVTALKMMLDDNAYGLSRRR 200

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++P IDKL+Q+ PV +AVSLHASN+ LR+ LVP++KKYPL+EL+ AC RY+ +
Sbjct: 201 VTLSTSGVVPNIDKLSQDVPVAMAVSLHASNDALRDILVPLNKKYPLRELMAACKRYLEF 260

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G ND+D HA ELI+L+    +  +CK NLIPFN FP S L  SKN 
Sbjct: 261 APRDFITFEYCMLDGFNDSDEHARELIALVNDPVVGVNCKFNLIPFNPFPESGLTRSKNP 320

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RIK FA++LMN+GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 321 RIKAFAEVLMNAGIVTTVRKTRGDDIDAACGQLAGEVKD 359


>gi|237654043|ref|YP_002890357.1| GTP-binding protein EngA [Thauera sp. MZ1T]
 gi|237625290|gb|ACR01980.1| small GTP-binding protein [Thauera sp. MZ1T]
          Length = 442

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/429 (53%), Positives = 310/429 (72%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G + ++++DT GF
Sbjct: 1   MKPTIVLVGRPNVGKSTLFNRLTRTRDALVADQPGLTRDRHYGIGRVGDRDYLVVDTAGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +P  K GIMHEM +Q +QAI E+D+++F+VDGR G    D+ I   LR++G+P+ +V+NK
Sbjct: 61  DPVAKDGIMHEMARQAEQAIAEADVLLFLVDGRAGRTPHDENIAARLRRAGRPVHVVVNK 120

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E I+ + ++ DF+ LG+G+P  +SA +G+G+K  +E +L    P+    +K+   +   
Sbjct: 121 AEGIDRAMVAADFHALGLGDPLPVSAAHGDGVKQLVELVLA---PFPADDEKEHSDD--- 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            E  KVAIVG+PNVGKSTL+N+LLGE RVI +D PGTTRD+I   FE   K+Y LIDTAG
Sbjct: 175 -EGPKVAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDAISIPFERGGKRYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE +EKFSVIKTL+++ E NVV+L+LDA Q+IS QD +IA F  E+GR+L+V 
Sbjct: 234 LRRRGKVFEAVEKFSVIKTLQAVQECNVVVLVLDAAQDISDQDAHIAGFALEAGRALVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++   +R  +K +I +KL FLSFA F+ ISA+K   I   ++S++  Y ++  +L
Sbjct: 294 INKWDAVDDYRRDRLKADIARKLAFLSFARFHQISALKAEGIAGLLKSVDAAYAAATANL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T R+TRAL  A+    P R  L RPK+RYAHQGG NPP+IVIHGN L  I   Y RYLE
Sbjct: 354 ATPRLTRALQQAVARQAPPRHGLARPKMRYAHQGGMNPPVIVIHGNALDDIPQSYVRYLE 413

Query: 420 KYFYRTFSL 428
           + F   F L
Sbjct: 414 RCFMDAFDL 422


>gi|253999419|ref|YP_003051482.1| GTP-binding protein EngA [Methylovorus glucosetrophus SIP3-4]
 gi|313201441|ref|YP_004040099.1| small GTP-binding protein [Methylovorus sp. MP688]
 gi|253986098|gb|ACT50955.1| small GTP-binding protein [Methylovorus glucosetrophus SIP3-4]
 gi|312440757|gb|ADQ84863.1| small GTP-binding protein [Methylovorus sp. MP688]
          Length = 523

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 230/429 (53%), Positives = 304/429 (70%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P +VLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G  G K F+++DTGGF
Sbjct: 1   MLPTIVLVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGIGGDKPFLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+ EM KQT  AI E+D++IF+VDGR GL  QDK+I + LRKS +P++L +NK
Sbjct: 61  EPLVDSGILKEMAKQTLLAIDEADVVIFMVDGRNGLAPQDKVIADRLRKSQRPVLLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +I S +F+ELG+G+P  IS+ +G G+++       +EL    F + +       
Sbjct: 121 TEGMQRAIVSAEFHELGLGDPLSISSAHGEGVRDL------VELALADFPEPEPEEENDG 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               KVAIVG+PNVGKSTL+N+LLG+ RVI +D PGTTRDSI    E N K Y +IDTAG
Sbjct: 175 SRTPKVAIVGRPNVGKSTLVNALLGQERVIAFDQPGTTRDSIHIDLERNGKHYTIIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE IEKFSVIKT+++I EANV IL++DAQ+ I+ QD ++A +I E+GR+L+V 
Sbjct: 235 VRKRGKVFEAIEKFSVIKTIQAIEEANVAILVVDAQEGITEQDAHVAAYILEAGRALVVA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  ++R  IK  I +KL FL FA F++ISA++   +     S++  Y +++  L
Sbjct: 295 INKWDGLKEDERDWIKREIDRKLQFLDFAKFHYISALRKKGLPELFTSVDGAYKAAMAKL 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L  AI  H P   K IRPKLRYAHQGG NPPI+VIHGN +  + + YKRYLE
Sbjct: 355 STPQLTRVLEDAIIQHQPPISKGIRPKLRYAHQGGSNPPIVVIHGNHVDGVKDSYKRYLE 414

Query: 420 KYFYRTFSL 428
             F + F L
Sbjct: 415 GVFRKAFQL 423


>gi|261365613|ref|ZP_05978496.1| ribosome-associated GTPase EngA [Neisseria mucosa ATCC 25996]
 gi|288565845|gb|EFC87405.1| ribosome-associated GTPase EngA [Neisseria mucosa ATCC 25996]
          Length = 485

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 226/429 (52%), Positives = 304/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E      
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------EKFPEPEAEET-E 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I    R+ IK +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEEWREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 STPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|298368463|ref|ZP_06979781.1| ribosome-associated GTPase EngA [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282466|gb|EFI23953.1| ribosome-associated GTPase EngA [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 492

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 8   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 67

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 68  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSQRPVYLAVNK 127

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G PH+IS  +G+G+   +E IL      +KF + +       
Sbjct: 128 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL------EKFPEPE--AEEAD 179

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 180 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 239

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 240 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 299

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ IK +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 300 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 359

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 360 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 419

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 420 QTFRKAFNL 428


>gi|399018040|ref|ZP_10720226.1| 23S rRNA methyltransferase [Herbaspirillum sp. CF444]
 gi|398102005|gb|EJL92197.1| 23S rRNA methyltransferase [Herbaspirillum sp. CF444]
          Length = 393

 Score =  480 bits (1236), Expect = e-132,   Method: Composition-based stats.
 Identities = 219/342 (64%), Positives = 274/342 (80%), Gaps = 4/342 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQLQ+WIH++GV+DF +MTDL+ SLR+KL    ++ AP I+SD  S DGTR
Sbjct: 22  ELGEKPFRAKQLQRWIHQYGVADFAEMTDLAKSLREKLSTRAFVAAPAIISDHTSTDGTR 81

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE+ R TLCISTQ GCA+NC FCSTG+QGF RNL+VGEIIGQL
Sbjct: 82  KWLVDVGNGNAVETVFIPEETRGTLCISTQAGCAVNCRFCSTGKQGFNRNLSVGEIIGQL 141

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LR+ K I+   +G+RQITN+VMMGMGEPLLN++ T+ ALKL+L D+AYGLSRR 
Sbjct: 142 WMAEFELRKTKGIEAGPKGERQITNVVMMGMGEPLLNFEPTVTALKLMLDDNAYGLSRRR 201

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMIDKL+QECPV LAVSLHASN+ LR+ L+P++KKYPL+EL+ AC RY+ +
Sbjct: 202 VTLSTSGVVPMIDKLSQECPVALAVSLHASNDTLRDGLIPLNKKYPLQELMAACKRYLEF 261

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMR---KNKILTSCKINLIPFNCFPNSNLICS 830
           +PR  +TFEYCML G+ND+D HA EL++L++     K    CK NLIPFN FP S L  S
Sbjct: 262 APRDFVTFEYCMLDGVNDSDAHARELVALVQGGGDGKAAVPCKFNLIPFNPFPESGLKRS 321

Query: 831 KNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            N RIK FA+ILM++G+  TIRK RG+DI+AACGQL+GE  D
Sbjct: 322 HNPRIKAFAQILMDAGLVTTIRKTRGDDIDAACGQLAGEVKD 363


>gi|294670887|ref|ZP_06735743.1| hypothetical protein NEIELOOT_02591 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307374|gb|EFE48617.1| hypothetical protein NEIELOOT_02591 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 491

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 304/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGRLGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E     + + +FYEL +G PH+IS  +G+G+ + +E +L      + F   KE +N   
Sbjct: 121 GEGGRHDVLAAEFYELALGEPHVISGAHGDGVYHLIEKVL------EHFPDAKEESN--E 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L++ 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R  IK +I +KL FL FA F++ISA+K   I+   +SI   YD++ I +
Sbjct: 293 VNKWDGISEERRNDIKRDIARKLYFLDFAKFHYISALKERGIDGLFDSIQAAYDAAFIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IVIHGN L++I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPARAGLVRPKMRYAHQGGMNPPVIVIHGNSLQHIPDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|452126153|ref|ZP_21938736.1| GTP-binding protein Der [Bordetella holmesii F627]
 gi|452129521|ref|ZP_21942096.1| GTP-binding protein Der [Bordetella holmesii H558]
 gi|451921248|gb|EMD71393.1| GTP-binding protein Der [Bordetella holmesii F627]
 gi|451923156|gb|EMD73298.1| GTP-binding protein Der [Bordetella holmesii H558]
          Length = 451

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/431 (53%), Positives = 312/431 (72%), Gaps = 8/431 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G   FI+IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R GL   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILAEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIARLLRKSGQQRVLLAVNK 123

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
           +E +N   ++ +FYELG+G PH ISA +G+GI + +E  L  +  P ++     E +   
Sbjct: 124 AEGMNEGKAISEFYELGLGEPHPISAAHGDGIGDLIEVALQDLAAPEEEV----EPSEQD 179

Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
            +E+ IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  FE + +KY LIDT
Sbjct: 180 GVEHRIKLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFERDGRKYTLIDT 239

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K FE +EKFSVIKTL++I  +NVV+L+LDAQ  IS QD +IA F+ E+GR+++
Sbjct: 240 AGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQSEISEQDAHIAGFVLETGRAVV 299

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +   QR+ I+   ++KL FLSFA  + ISA+K   I   ++S+N  + ++  
Sbjct: 300 VAINKWDGLDDEQRERIEREFQRKLRFLSFARMHTISALKGQGIRPLLKSVNAAHAAAFA 359

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            LST ++TR L +A++   P RK + RPK+RYAHQGG+NPP+IV+HG+ L  I + Y+RY
Sbjct: 360 KLSTPKLTRELQAAVEQQQPPRKGIFRPKMRYAHQGGQNPPLIVVHGSALDAIPDSYRRY 419

Query: 418 LEKYFYRTFSL 428
           LE  F   F L
Sbjct: 420 LETRFRNAFDL 430


>gi|291613885|ref|YP_003524042.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1]
 gi|291583997|gb|ADE11655.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1]
          Length = 465

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 312/429 (72%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P LVLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G++ ++++DTGG 
Sbjct: 1   MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGRGRVGERPYLVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K+GIMHEM KQT+QA+ E+D+++FIVDGR GL  QD++I   LRK+G+P++L++NK
Sbjct: 61  EPVAKEGIMHEMAKQTRQAVDEADLVLFIVDGRDGLTPQDRIIATQLRKTGRPVMLLVNK 120

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +    ++ DF+ELG+G P  IS+ +G+ +   +E  L  ELP        E      
Sbjct: 121 AEGMRRERVTADFHELGLGEPIPISSAHGDNVAEMIEVALD-ELP------AAEVEAEEK 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++ K+AIVG+PNVGKSTL+N++LGE RVI +D PGTTRDSI   FE   ++Y +IDTAG
Sbjct: 174 SDHPKLAIVGRPNVGKSTLVNAILGEERVIAFDQPGTTRDSIYIDFERAGRQYTIIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K  E IEKFSV+KTL++I +ANVV+L++DA+  I+ QD ++A+F+ ++GR+L++ 
Sbjct: 234 IRRRGKIDEAIEKFSVVKTLQAIEDANVVVLVVDARDQITEQDAHLADFVLQAGRALVLA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   +R  +K +I++KL+FLSFA  +FISA+    +++ ++S+N  Y +++  +
Sbjct: 294 VNKWDGLDEYKRDTVKRDIERKLHFLSFAKHHFISALNGTGVDALLKSVNQAYTAAMTKM 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A++   P R    RPK+RYAHQGG NPP+I+IHG+ L  I + Y RYLE
Sbjct: 354 PTPQLTRVLEEALQKQQPPRVGSFRPKMRYAHQGGSNPPLIIIHGSALDKIPDSYTRYLE 413

Query: 420 KYFYRTFSL 428
           K F   F L
Sbjct: 414 KTFCDAFKL 422


>gi|419795877|ref|ZP_14321457.1| ribosome-associated GTPase EngA [Neisseria sicca VK64]
 gi|385700090|gb|EIG30347.1| ribosome-associated GTPase EngA [Neisseria sicca VK64]
          Length = 485

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 304/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E      
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEA-D 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ IK +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|225024393|ref|ZP_03713585.1| hypothetical protein EIKCOROL_01268 [Eikenella corrodens ATCC
           23834]
 gi|224942774|gb|EEG23983.1| hypothetical protein EIKCOROL_01268 [Eikenella corrodens ATCC
           23834]
          Length = 485

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 303/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D +IF+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E     + + +FYEL +G PH+IS  +G+G+   +E +L      + F +  E  +   
Sbjct: 121 GEGGRRDVLAAEFYELALGEPHVISGAHGDGVYYLMEEVL------ENFPEATEEDS--E 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE + K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  +NV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVEEAVEKFSVIKAMQAVEASNVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R  IK +I+ KL+FL FA F+FISA+K   I+    SI   YD++ I +
Sbjct: 293 VNKWDGISEERRNTIKKDIEHKLHFLDFAKFHFISALKERGIDGLFASIQSAYDAAFIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IVIHGN L+++ + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPARAGLVRPKMRYAHQGGMNPPVIVIHGNSLQHVADSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|349609886|ref|ZP_08889255.1| GTP-binding protein engA [Neisseria sp. GT4A_CT1]
 gi|348611082|gb|EGY60753.1| GTP-binding protein engA [Neisseria sp. GT4A_CT1]
          Length = 485

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 304/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E      
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEA-D 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ IK +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|348618426|ref|ZP_08884952.1| GTP-binding protein EngA [Candidatus Glomeribacter gigasporarum
           BEG34]
 gi|347816302|emb|CCD29695.1| GTP-binding protein EngA [Candidatus Glomeribacter gigasporarum
           BEG34]
          Length = 449

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 227/432 (52%), Positives = 301/432 (69%), Gaps = 3/432 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDALVA++ G TRDRHYGEG  G + + I+DTGGF
Sbjct: 1   MKPVITLVGRPNVGKSTLFNRLTRSRDALVADFAGTTRDRHYGEGRAGSRPYWIVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  ++GI+ +M +QT+QA+ ESD I+FIVD RQGL  QD+ I  +LRK+G+P+ +++NK
Sbjct: 61  EPAARRGIIRQMAQQTRQAVDESDCILFIVDARQGLTPQDEWIAAWLRKTGRPLCVILNK 120

Query: 121 SENINSS--ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKF-FKKKEFTNI 177
           +E   ++  ++ DFY LG+G  H ISA +GNG+   +E  L      ++     +E    
Sbjct: 121 AEGNAAAYVLAADFYALGLGELHPISAAHGNGVSAMIEAALEAACQGREAQTDTEEEGED 180

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                I++A+ G+PNVGKSTLIN+LLGE RVI  D PGTTRDSI   F++  + Y LIDT
Sbjct: 181 RQGRGIRIAVAGRPNVGKSTLINALLGEERVIASDAPGTTRDSIAIDFQWQGRDYQLIDT 240

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR +  E IEKFSVIKT++SI  A+VV+LLLDA+Q IS QD ++A F+ E GR+L+
Sbjct: 241 AGVRRRARVSEAIEKFSVIKTMQSIAAAHVVVLLLDARQEISEQDAHLAGFVVEQGRALV 300

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + VNKWD +   QR+  K  +++KL FL FA F+FISA++   +   M S++  Y + + 
Sbjct: 301 IGVNKWDGLDSYQRERAKVALRRKLPFLDFAEFHFISALRKTGLEPLMRSVDAAYQAGMC 360

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++T AL +A    PP R  LIRPKLRYAHQGG NPP IVIHGN L  +   Y+RY
Sbjct: 361 KLPTPKLTLALRAAAGFQPPRRSGLIRPKLRYAHQGGHNPPAIVIHGNALDALTPAYQRY 420

Query: 418 LEKYFYRTFSLI 429
           LEK F   F L+
Sbjct: 421 LEKRFRAAFPLV 432


>gi|255065190|ref|ZP_05317045.1| ribosome-associated GTPase EngA [Neisseria sicca ATCC 29256]
 gi|255050611|gb|EET46075.1| ribosome-associated GTPase EngA [Neisseria sicca ATCC 29256]
          Length = 535

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 51  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 110

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 111 EPVVDSGILHEMAKQTFQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 170

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G PH+IS  +G+G+   +E IL      +KF + +       
Sbjct: 171 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL------EKFPEPE--AEEAD 222

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 223 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 282

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 283 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 342

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ IK +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 343 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 402

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 403 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 462

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 463 QTFRKAFNL 471


>gi|340362433|ref|ZP_08684818.1| ribosome-associated GTPase EngA [Neisseria macacae ATCC 33926]
 gi|339887441|gb|EGQ76997.1| ribosome-associated GTPase EngA [Neisseria macacae ATCC 33926]
          Length = 485

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 304/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E      
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEKIL-------ENFPESEAEEA-D 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ IK +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SA++   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|187478830|ref|YP_786854.1| GTP-binding protein EngA, partial [Bordetella avium 197N]
 gi|115423416|emb|CAJ49950.1| GTP-binding protein [Bordetella avium 197N]
          Length = 451

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 308/429 (71%), Gaps = 4/429 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G   FI+IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R G+   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILAEMARQTRQAIAEADVVVFLVDARAGINAHDHEIARLLRKSGQQRVLLAVNK 123

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +N    + DF+ELG+G PH ISA +G+G+ + +E+ L   +P        E   +  
Sbjct: 124 AEGMNEGKATSDFFELGLGEPHPISAAHGDGVVDLIESALADLVPPADEIADAEEGEVQ- 182

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  FE + ++Y LIDTAG
Sbjct: 183 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIEFERDGRQYTLIDTAG 241

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE +EKFSVIKTL++I  +NVV+L+LDAQ  IS QD +IA F+ E+GR+++V 
Sbjct: 242 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQSEISEQDAHIAGFVLETGRAVVVA 301

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  +QR+ I+   ++KL FL+FA  + ISA+K   I   ++S+N  + ++   L
Sbjct: 302 INKWDGLDDDQRERIEREFQRKLRFLTFARMHTISALKGQGIRPLLKSVNAAHAAAFAKL 361

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L +A++   P RK + RPK+RYAHQGG+NPP+I++HG+ L  I + Y+RYLE
Sbjct: 362 STPKLTRELQAAVEQQQPPRKGIFRPKMRYAHQGGQNPPLIIVHGSALDAIPDSYRRYLE 421

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 422 TRFRNAFDL 430


>gi|257093699|ref|YP_003167340.1| GTP-binding protein EngA [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046223|gb|ACV35411.1| small GTP-binding protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 492

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/429 (53%), Positives = 308/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MK  +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKTSIVLVGRPNVGKSTLFNRLTRTRDALVADLPGLTRDRHYGHGKLGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GIM+ M +QT+QAI E+D++I +VDGR GL   DK I N LRK  +P+++ +NK
Sbjct: 61  EPLAKDGIMYHMARQTEQAIDEADVVILVVDGRSGLTALDKEIANRLRKVDRPVLVAVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE ++  + + DF+ELG+G P  ISA +G G++  ++  L +E P  +  + +  +++  
Sbjct: 121 SEGMSVGVVVSDFHELGLGEPLAISAAHGEGVRALID--LALE-PCAEAVESEPESDV-- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +KVAIVG+PNVGKSTLIN+LLGE+RVI +D PGTTRD+I+  FE   KKY LIDTAG
Sbjct: 176 ---VKVAIVGRPNVGKSTLINALLGEDRVIAFDQPGTTRDAIEVDFERGGKKYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR + FE IEKFSVIKTL+++ +A VVIL+LDA+Q+I+ QD +IA FI ESGR+L+V 
Sbjct: 233 LRRRGRVFETIEKFSVIKTLQAVEDAQVVILVLDARQDIAEQDAHIAAFIRESGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    R+ IK  ++ +L F+ FA F+++SA++   +     S++  Y ++I  L
Sbjct: 293 VNKWDGLDSYVREQIKGALEGQLGFIDFARFHYVSALRGQGLEPLFRSVDAAYRAAIADL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L  A+    P R  L RPKLRYAHQGG+NPP+IVIHGN L  +   Y+RYLE
Sbjct: 353 PTPQLTRTLSEAVARQAPPRSGLFRPKLRYAHQGGRNPPLIVIHGNALDKVPESYRRYLE 412

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 413 HTFREVFKL 421


>gi|421537871|ref|ZP_15984053.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93003]
 gi|402317908|gb|EJU53435.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93003]
          Length = 485

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERKGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+S  ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDSLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|15676748|ref|NP_273893.1| GTP-binding protein EngA [Neisseria meningitidis MC58]
 gi|385853467|ref|YP_005899981.1| GTP-binding protein [Neisseria meningitidis H44/76]
 gi|416197331|ref|ZP_11618541.1| GTP-binding protein [Neisseria meningitidis CU385]
 gi|421540026|ref|ZP_15986179.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93004]
 gi|427827899|ref|ZP_18994920.1| small GTP-binding domain protein [Neisseria meningitidis H44/76]
 gi|433464834|ref|ZP_20422319.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM422]
 gi|433488083|ref|ZP_20445251.1| ribosome-associated GTPase EngA [Neisseria meningitidis M13255]
 gi|433490203|ref|ZP_20447332.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM418]
 gi|433504645|ref|ZP_20461585.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9506]
 gi|433506871|ref|ZP_20463783.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9757]
 gi|433508979|ref|ZP_20465852.1| ribosome-associated GTPase EngA [Neisseria meningitidis 12888]
 gi|433511116|ref|ZP_20467948.1| ribosome-associated GTPase EngA [Neisseria meningitidis 4119]
 gi|26006741|sp|Q9JZY1.1|DER_NEIMB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|7226088|gb|AAF41263.1| essential GTPase [Neisseria meningitidis MC58]
 gi|316984259|gb|EFV63235.1| small GTP-binding domain protein [Neisseria meningitidis H44/76]
 gi|325140003|gb|EGC62532.1| GTP-binding protein [Neisseria meningitidis CU385]
 gi|325200471|gb|ADY95926.1| GTP-binding protein [Neisseria meningitidis H44/76]
 gi|402320310|gb|EJU55801.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93004]
 gi|432204321|gb|ELK60366.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM422]
 gi|432224549|gb|ELK80314.1| ribosome-associated GTPase EngA [Neisseria meningitidis M13255]
 gi|432228111|gb|ELK83812.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM418]
 gi|432242160|gb|ELK97684.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9506]
 gi|432242660|gb|ELK98178.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9757]
 gi|432247793|gb|ELL03228.1| ribosome-associated GTPase EngA [Neisseria meningitidis 12888]
 gi|432248607|gb|ELL04032.1| ribosome-associated GTPase EngA [Neisseria meningitidis 4119]
          Length = 485

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 307/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL  + P  +    +E    H 
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILE-KFPEPE---AEEADARHP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +     A++G+PNVGKSTL+N++LGE RVIT+D  GTTRDSI   FE   K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVITFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|412338299|ref|YP_006967054.1| GTP-binding protein [Bordetella bronchiseptica 253]
 gi|408768133|emb|CCJ52892.1| putative GTP-binding protein [Bordetella bronchiseptica 253]
          Length = 451

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/431 (52%), Positives = 311/431 (72%), Gaps = 7/431 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G   F++IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDTPFLVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R G+   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILAEMARQTRQAIAEADVVVFLVDARAGVNAHDHEIARLLRKSGQQRVLLAVNK 123

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
           +E +   + + DF+ELG+G PH ISA +G+GI + +E  L+  +  P     + ++    
Sbjct: 124 AEGMGVGNATSDFHELGLGEPHPISAAHGDGIVDLIEVALSGLVAPPVDTGEQLEQDVVD 183

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
           H I   K+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRD+I+  FE + +KY LIDT
Sbjct: 184 HRI---KLAIVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDAIEIDFERDGRKYTLIDT 240

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K FE IEKFSVIKTL++I  +NVV+L++DAQ  +S QD +IA F+ E+GR+++
Sbjct: 241 AGLRKRGKVFEAIEKFSVIKTLQAIEASNVVLLMIDAQAEVSEQDAHIAGFVLETGRAVV 300

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +  +QR+ I+   ++KL FLSFA  + ISA+K   +   ++S+N  + ++  
Sbjct: 301 VAINKWDGLDSDQRERIEREFQRKLRFLSFARMHTISALKGQGVKPLLKSVNAAHAAAFA 360

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            LST R+TR L +A++  PP RK + RPK+RYAHQGG+NPP+IVIHGN L  + + Y+RY
Sbjct: 361 KLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLIVIHGNALDAVPDSYRRY 420

Query: 418 LEKYFYRTFSL 428
           LE  F   F L
Sbjct: 421 LETRFRNAFDL 431


>gi|149926362|ref|ZP_01914623.1| GTP-binding protein EngA [Limnobacter sp. MED105]
 gi|149824725|gb|EDM83939.1| GTP-binding protein EngA [Limnobacter sp. MED105]
          Length = 441

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/429 (53%), Positives = 312/429 (72%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDALVAN PGLTRDRHYG G IG + ++++DTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRTRDALVANQPGLTRDRHYGVGRIGPREYLVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI  EM KQ++QAI+ESD+++F+VDGRQG+   D +I   LRK+ + ++LV+NK
Sbjct: 61  EPVAKDGIYAEMAKQSRQAIVESDLVLFLVDGRQGVTPHDHVIAAELRKAKREVILVVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E    S++  DF+ELG+G P  ISA +G+G++  + +I   +LP      + E      
Sbjct: 121 TEGYTHSMAAADFFELGLGEPETISASHGDGVRQLM-DIACEKLP---VLPEDEAGG--- 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IKVAI G+PNVGKST++N+LLGE RVI +D PGTTRDSI   FE N+K Y LIDTAG
Sbjct: 174 -RRIKVAIAGRPNVGKSTMVNTLLGEERVIAFDLPGTTRDSIYIDFERNDKPYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE +EKFSVIKTL++I +ANVVIL+LDAQQ+IS QD +IA FI E+GRSL++ 
Sbjct: 233 LRKRGKVFESVEKFSVIKTLQAIEDANVVILMLDAQQDISDQDASIAGFIVEAGRSLVLA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWDS+   +++ IK  + +KL FL++A F+++SA K   I + M+S++  + ++   L
Sbjct: 293 VNKWDSLDDYRKERIKAEVGRKLTFLNYAKFHYVSATKPFGIAAMMKSVDEAHAAAFAKL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR +   +++  P RK + RPKLRYAHQGG+NPPI+++HG  L  I ++YKRYLE
Sbjct: 353 STPKLTRLIQECVEHQQPPRKGIFRPKLRYAHQGGQNPPIVIVHGTALDAIPDNYKRYLE 412

Query: 420 KYFYRTFSL 428
                 F L
Sbjct: 413 TRIRERFKL 421


>gi|121634628|ref|YP_974873.1| GTP-binding protein EngA [Neisseria meningitidis FAM18]
 gi|385324412|ref|YP_005878851.1| putative GTP-binding protein EngA [Neisseria meningitidis 8013]
 gi|385339808|ref|YP_005893680.1| GTP-binding protein [Neisseria meningitidis G2136]
 gi|385854979|ref|YP_005901492.1| GTP-binding protein [Neisseria meningitidis M01-240355]
 gi|416205468|ref|ZP_11620559.1| GTP-binding protein [Neisseria meningitidis 961-5945]
 gi|421542253|ref|ZP_15988363.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM255]
 gi|421558880|ref|ZP_16004758.1| ribosome-associated GTPase EngA [Neisseria meningitidis 92045]
 gi|433466987|ref|ZP_20424444.1| ribosome-associated GTPase EngA [Neisseria meningitidis 87255]
 gi|433468993|ref|ZP_20426422.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98080]
 gi|433494417|ref|ZP_20451487.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM762]
 gi|433496601|ref|ZP_20453642.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7089]
 gi|433498661|ref|ZP_20455670.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7124]
 gi|433500629|ref|ZP_20457615.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM174]
 gi|433536535|ref|ZP_20493043.1| ribosome-associated GTPase EngA [Neisseria meningitidis 77221]
 gi|166225830|sp|A1KT93.1|DER_NEIMF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|120866334|emb|CAM10076.1| putative GTP-binding protein [Neisseria meningitidis FAM18]
 gi|261392799|emb|CAX50375.1| putative GTP-binding protein EngA [Neisseria meningitidis 8013]
 gi|325142105|gb|EGC64531.1| GTP-binding protein [Neisseria meningitidis 961-5945]
 gi|325198052|gb|ADY93508.1| GTP-binding protein [Neisseria meningitidis G2136]
 gi|325203920|gb|ADY99373.1| GTP-binding protein [Neisseria meningitidis M01-240355]
 gi|402318189|gb|EJU53714.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM255]
 gi|402337623|gb|EJU72871.1| ribosome-associated GTPase EngA [Neisseria meningitidis 92045]
 gi|432203563|gb|ELK59614.1| ribosome-associated GTPase EngA [Neisseria meningitidis 87255]
 gi|432205386|gb|ELK61416.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98080]
 gi|432231091|gb|ELK86761.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM762]
 gi|432234495|gb|ELK90115.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7124]
 gi|432235301|gb|ELK90917.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7089]
 gi|432235920|gb|ELK91529.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM174]
 gi|432274485|gb|ELL29573.1| ribosome-associated GTPase EngA [Neisseria meningitidis 77221]
          Length = 485

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/430 (52%), Positives = 306/430 (71%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL T   P     + +E    H
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 175

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTA
Sbjct: 176 PV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 231

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V
Sbjct: 232 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 291

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I 
Sbjct: 292 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 351

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL
Sbjct: 352 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411

Query: 419 EKYFYRTFSL 428
            + F + F+L
Sbjct: 412 TQTFRKAFNL 421


>gi|345875075|ref|ZP_08826871.1| ribosome-associated GTPase EngA [Neisseria weaveri LMG 5135]
 gi|417958224|ref|ZP_12601140.1| ribosome-associated GTPase EngA [Neisseria weaveri ATCC 51223]
 gi|343967286|gb|EGV35535.1| ribosome-associated GTPase EngA [Neisseria weaveri ATCC 51223]
 gi|343969502|gb|EGV37714.1| ribosome-associated GTPase EngA [Neisseria weaveri LMG 5135]
          Length = 495

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 308/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 11  MKPTIALVGRPNVGKSTLFNRLTKTKDALVADLPGLTRDRHYGHGRVGSKPYLVVDTGGF 70

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM K T QAI E+D ++F+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 71  EPVVDSGILHEMAKHTLQAIDEADAVVFLVDCRTGLTPQDKIIADRLRQSSRPVFLAVNK 130

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ S +FYEL +G+P++IS  +G+G+   +E++L     + +  ++ E    H 
Sbjct: 131 GEGANHAVLSAEFYELALGDPYVISGAHGDGVYYLIEDVLA---HFPEAVEEDEQPR-HP 186

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE + K + +IDTAG
Sbjct: 187 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDGKPFTIIDTAG 242

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK +++I  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 243 VRRRGKVDEAVEKFSVIKAMQAIEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 302

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD+I  +++  IK +I +KL FL FA F++ISA+K   I    +SI   YD+++I +
Sbjct: 303 VNKWDNIDEDRKNQIKRDIARKLYFLDFAKFHYISALKERGIEGLFDSIQAAYDAAMIKM 362

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SA++   P R  L+RPK+RYAHQGG NPP+IV+HGN L++I + Y RYL 
Sbjct: 363 PTPKITRVLQSAVERQQPARAGLVRPKMRYAHQGGMNPPVIVVHGNSLQHISDAYTRYLT 422

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 423 QTFRKAFNL 431


>gi|145589468|ref|YP_001156065.1| GTP-binding protein EngA [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189037153|sp|A4SYD7.1|DER_POLSQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|145047874|gb|ABP34501.1| small GTP-binding protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 454

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/432 (54%), Positives = 311/432 (71%), Gaps = 10/432 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ +VGRPNVGKSTLFNRLT SRDALVA++ GLTRDRHYG+G IG+++FI +DTGGF
Sbjct: 1   MNPVITIVGRPNVGKSTLFNRLTRSRDALVADFSGLTRDRHYGKGRIGERAFICVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+ EM KQTKQA+ ESDI+IF+VDGR G+  QD++I +FLRK+G+P++L +NK
Sbjct: 61  EPVAKTGIVAEMAKQTKQAVAESDIVIFLVDGRLGMAPQDRVIADFLRKTGRPVILAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILT---IELPYKKFFKKKEFTN 176
           +E + S I + DF+ELG+G P  IS+ +G+G+K  +++ L    I  P      + E  N
Sbjct: 121 TEGMQSGIVTADFHELGLGEPFPISSAHGDGVKGLIDDALDSLGIAEP-----DEDELAN 175

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
             +   +K+A+VG+PNVGKSTLIN L+GE RVI +D PGTTRD+I+  FE N K YIL+D
Sbjct: 176 DPN-RPMKIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTRDAIEVPFERNGKPYILVD 234

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+RRR K FE IEKFSV+KTL++I + NVVIL+LDAQQ+IS QD +IA FI E+GR+L
Sbjct: 235 TAGLRRRGKVFEAIEKFSVVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEAGRAL 294

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           +V VNKWD +    ++  +  I +KL FL FA  + ISA K   +    + ++  Y +++
Sbjct: 295 VVAVNKWDGLDAYVKERARLEIAQKLRFLDFANVHPISAKKGTGLKDLFKDVDAAYAAAM 354

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
             L T R+TR L  AI++  P R  + RPKLRYAHQGG NPPI+VIHG  L  + + YKR
Sbjct: 355 AKLPTPRLTRILQEAIEHQQPKRVGMGRPKLRYAHQGGMNPPIVVIHGTSLSGVTDSYKR 414

Query: 417 YLEKYFYRTFSL 428
           YLE  F   F L
Sbjct: 415 YLEGRFRDVFKL 426


>gi|456063405|ref|YP_007502375.1| small GTP-binding protein [beta proteobacterium CB]
 gi|455440702|gb|AGG33640.1| small GTP-binding protein [beta proteobacterium CB]
          Length = 454

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/430 (53%), Positives = 313/430 (72%), Gaps = 6/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ +VGRPNVGKSTLFNRLT SRDALVA++ GLTRDRHYG+G IG+++FI +DTGGF
Sbjct: 1   MNPVITIVGRPNVGKSTLFNRLTRSRDALVADFSGLTRDRHYGKGRIGERAFICVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+ EM KQTKQA+ ESDI+IF+VDGR G+  QD++I +FLRK+G+P++L +NK
Sbjct: 61  EPVAKTGIVAEMAKQTKQAVAESDIVIFLVDGRLGMAPQDRVIADFLRKTGRPVILAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E + + + + DF+ELG+G P  IS+ +G+G++  +++ L ++ +P  +  + +   N  
Sbjct: 121 TEGMQAGVVTADFHELGLGEPFPISSAHGDGVRGLIDDALDSLGVPEPEPEELENDPN-- 178

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +K+A+VG+PNVGKSTLIN L+GE RVI +D PGTTRD+I+  FE N K YIL+DTA
Sbjct: 179 --RPMKIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTRDAIEVPFERNGKPYILVDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K FE IEKFSV+KTL++I + NVVIL+LDAQQ+IS QD +IA FI E+GR+L+V
Sbjct: 237 GLRRRGKVFEAIEKFSVVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEAGRALVV 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +    ++  +  I +KL FL FA  + ISA K   +    + ++  Y +++  
Sbjct: 297 AVNKWDGLDAYVKERARLEIAQKLRFLDFANVHPISAKKGTGLKELFKDVDLAYAAAMAK 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           L T ++TR L  AI++  P R  + RPKLRYAHQGG NPPI+VIHG  L  + + YKRYL
Sbjct: 357 LPTPKLTRILQEAIEHQQPKRVGMGRPKLRYAHQGGMNPPIVVIHGTSLSGVTDSYKRYL 416

Query: 419 EKYFYRTFSL 428
           E  F   F L
Sbjct: 417 EGRFRDVFKL 426


>gi|416172242|ref|ZP_11608722.1| GTP-binding protein [Neisseria meningitidis OX99.30304]
 gi|325130014|gb|EGC52808.1| GTP-binding protein [Neisseria meningitidis OX99.30304]
          Length = 485

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|303257594|ref|ZP_07343606.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47]
 gi|330999635|ref|ZP_08323344.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis
           YIT 11859]
 gi|302859564|gb|EFL82643.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47]
 gi|329574141|gb|EGG55717.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis
           YIT 11859]
          Length = 443

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 309/429 (72%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDRHYG+G IG K +++IDTGGF
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRHYGDGRIGDKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP   +GI+ EMT Q + AI ESD+++F+VDGR GL  QD+ I   LR+SG+   LV+NK
Sbjct: 61  EPIRTEGIVKEMTGQAQLAITESDVVLFLVDGRAGLTPQDQRIAQNLRESGKKTYLVVNK 120

Query: 121 SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
           +E +  +   +FYEL +G P+ ISA +G G+K  ++ +L      + F  +KE       
Sbjct: 121 AEGLTETAKAEFYELALGEPYTISAAHGEGVKALMDLVL------EPFPTEKEIDEEEDF 174

Query: 181 EY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           ++ IKVAI G+PN GKSTLIN+L+GE+R+I +D PGTTRD+I+  F+Y ++ Y LIDTAG
Sbjct: 175 KHKIKVAIAGRPNAGKSTLINALIGEDRLIAFDMPGTTRDAIEVEFQYKDRDYTLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSVIKTL++I  +NVV+LLLDA   I+ QD NIA +I ESGR+L+V 
Sbjct: 235 LRRKGKVFEAIEKFSVIKTLQAIESSNVVVLLLDAHAGIAEQDANIAGYILESGRALVVG 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWDS+   +R+ +K  +++KL+FL +A   +ISA++   ++  + ++N  + ++ + L
Sbjct: 295 VNKWDSLDDYERRRVKEELERKLHFLRWAKIVYISALEKRGLHHLLNAVNDAHTAAFMKL 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TRALI A     P R    RPK+RYAHQGG+NPP+IV+HGN L+ +   Y+RYLE
Sbjct: 355 STPKLTRALIEATTRQLPPRAGGGRPKMRYAHQGGQNPPVIVVHGNALQDVPESYRRYLE 414

Query: 420 KYFYRTFSL 428
            +F   F L
Sbjct: 415 GWFRDKFKL 423


>gi|416188151|ref|ZP_11614620.1| GTP-binding protein [Neisseria meningitidis M0579]
 gi|325135934|gb|EGC58544.1| GTP-binding protein [Neisseria meningitidis M0579]
          Length = 536

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/430 (52%), Positives = 306/430 (71%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL T   P     + +E    H
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 226

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTA
Sbjct: 227 PV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 282

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V
Sbjct: 283 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 342

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I 
Sbjct: 343 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 402

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL
Sbjct: 403 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462

Query: 419 EKYFYRTFSL 428
            + F + F+L
Sbjct: 463 TQTFRKAFNL 472


>gi|304387839|ref|ZP_07370013.1| ribosome-associated GTPase EngA [Neisseria meningitidis ATCC 13091]
 gi|304338104|gb|EFM04240.1| ribosome-associated GTPase EngA [Neisseria meningitidis ATCC 13091]
          Length = 536

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/430 (52%), Positives = 306/430 (71%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL T   P     + +E    H
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 226

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTA
Sbjct: 227 PV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 282

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V
Sbjct: 283 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 342

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I 
Sbjct: 343 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 402

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL
Sbjct: 403 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462

Query: 419 EKYFYRTFSL 428
            + F + F+L
Sbjct: 463 TQTFRKAFNL 472



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 12/140 (8%)

Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
           ++  T   SI    +A+VG+PNVGKSTL N L      + +D PG TRD      +  +K
Sbjct: 42  ERHLTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSK 101

Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVI-----KTLKSILEANVVILLLDAQQNISAQDINI 285
            Y++IDT G       FE +    ++     +TL+++ EA+ V+ L+D +  ++ QD  I
Sbjct: 102 PYLVIDTGG-------FEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKII 154

Query: 286 ANFIYESGRSLIVCVNKWDS 305
           A+ + +S R + + VNK + 
Sbjct: 155 ADRLRQSPRPVYLAVNKGEG 174


>gi|421548595|ref|ZP_15994620.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2781]
 gi|402326256|gb|EJU61661.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2781]
          Length = 485

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|161869787|ref|YP_001598955.1| GTP-binding protein EngA [Neisseria meningitidis 053442]
 gi|161595340|gb|ABX73000.1| GTP-binding protein engA [Neisseria meningitidis 053442]
          Length = 536

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/430 (52%), Positives = 306/430 (71%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL T   P     + +E    H
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 226

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTA
Sbjct: 227 PV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 282

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V
Sbjct: 283 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 342

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I 
Sbjct: 343 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 402

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL
Sbjct: 403 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462

Query: 419 EKYFYRTFSL 428
            + F + F+L
Sbjct: 463 TQTFRKAFNL 472


>gi|313668681|ref|YP_004048965.1| GTP-binding protein [Neisseria lactamica 020-06]
 gi|313006143|emb|CBN87604.1| putative GTP-binding protein [Neisseria lactamica 020-06]
          Length = 485

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K + I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKEHGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L +A++   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|421557066|ref|ZP_16002975.1| ribosome-associated GTPase EngA [Neisseria meningitidis 80179]
 gi|402335751|gb|EJU71015.1| ribosome-associated GTPase EngA [Neisseria meningitidis 80179]
          Length = 485

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/430 (52%), Positives = 305/430 (70%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL T   P     + +E    H
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 175

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +     A++G+PNVGKSTL+N +LGE RVI +D  GTTRDSI   FE   K + +IDTA
Sbjct: 176 PV----FAVIGRPNVGKSTLVNVILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 231

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V
Sbjct: 232 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 291

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I 
Sbjct: 292 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 351

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL
Sbjct: 352 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411

Query: 419 EKYFYRTFSL 428
            + F + F+L
Sbjct: 412 TQTFRKAFNL 421


>gi|296314652|ref|ZP_06864593.1| ribosome-associated GTPase EngA [Neisseria polysaccharea ATCC
           43768]
 gi|296838560|gb|EFH22498.1| ribosome-associated GTPase EngA [Neisseria polysaccharea ATCC
           43768]
          Length = 485

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 301/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G PH+IS  +G+G+   +E+IL    P  +            
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEDILET-FPESE-------KEEEE 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 173 AKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I    R+ IK +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEEHREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|385342155|ref|YP_005896026.1| GTP-binding protein [Neisseria meningitidis M01-240149]
 gi|385851494|ref|YP_005898009.1| GTP-binding protein [Neisseria meningitidis M04-240196]
 gi|385856998|ref|YP_005903510.1| GTP-binding protein [Neisseria meningitidis NZ-05/33]
 gi|416162703|ref|ZP_11606805.1| GTP-binding protein [Neisseria meningitidis N1568]
 gi|416183658|ref|ZP_11612671.1| GTP-binding protein [Neisseria meningitidis M13399]
 gi|433473252|ref|ZP_20430616.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97021]
 gi|433481802|ref|ZP_20439067.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2006087]
 gi|433483787|ref|ZP_20441015.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2002038]
 gi|433485987|ref|ZP_20443188.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97014]
 gi|325127951|gb|EGC50852.1| GTP-binding protein [Neisseria meningitidis N1568]
 gi|325134015|gb|EGC56670.1| GTP-binding protein [Neisseria meningitidis M13399]
 gi|325202361|gb|ADY97815.1| GTP-binding protein [Neisseria meningitidis M01-240149]
 gi|325206317|gb|ADZ01770.1| GTP-binding protein [Neisseria meningitidis M04-240196]
 gi|325207887|gb|ADZ03339.1| GTP-binding protein [Neisseria meningitidis NZ-05/33]
 gi|432210853|gb|ELK66809.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97021]
 gi|432217633|gb|ELK73501.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2006087]
 gi|432221490|gb|ELK77300.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2002038]
 gi|432223033|gb|ELK78815.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97014]
          Length = 485

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|329120372|ref|ZP_08249039.1| ribosome-associated GTPase EngA [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327462327|gb|EGF08653.1| ribosome-associated GTPase EngA [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 490

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 300/429 (69%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT S+DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRSKDALVHDLPGLTRDRHYGHGRLGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E     + + +FYEL +G P +IS  +G+G+ + +E+IL        F   +E T    
Sbjct: 121 GEGGRHDVLAAEFYELALGEPRVISGAHGDGVYHLIEDIL------DSFPDAQEETATE- 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  +NV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEASNVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R  IK +I +KL FL FA F+FISA+K   I+   +SI   YD+++I +
Sbjct: 293 VNKWDGISEERRNDIKRDIARKLYFLDFAKFHFISALKEKGIDGLFDSIQAAYDAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SA++   P R  L+RPK+RYAHQGG NPP+IVIHGN L++I   Y RYL 
Sbjct: 353 PTPKITRVLQSAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVIHGNALQHISESYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F L
Sbjct: 413 QTFRKAFHL 421


>gi|33593199|ref|NP_880843.1| GTP-binding protein EngA [Bordetella pertussis Tohama I]
 gi|33597408|ref|NP_885051.1| GTP-binding protein EngA [Bordetella parapertussis 12822]
 gi|33602148|ref|NP_889708.1| GTP-binding protein EngA [Bordetella bronchiseptica RB50]
 gi|384204496|ref|YP_005590235.1| GTP-binding protein EngA [Bordetella pertussis CS]
 gi|408415647|ref|YP_006626354.1| GTP-binding protein [Bordetella pertussis 18323]
 gi|410419768|ref|YP_006900217.1| GTP-binding protein [Bordetella bronchiseptica MO149]
 gi|410473477|ref|YP_006896758.1| GTP-binding protein [Bordetella parapertussis Bpp5]
 gi|427814227|ref|ZP_18981291.1| putative GTP-binding protein [Bordetella bronchiseptica 1289]
 gi|427821304|ref|ZP_18988367.1| putative GTP-binding protein [Bordetella bronchiseptica D445]
 gi|427821832|ref|ZP_18988894.1| putative GTP-binding protein [Bordetella bronchiseptica Bbr77]
 gi|41017018|sp|Q7VWL4.1|DER_BORPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|41017021|sp|Q7W6Q0.1|DER_BORPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|41017022|sp|Q7WHN4.1|DER_BORBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|33563574|emb|CAE42473.1| putative GTP-binding protein [Bordetella pertussis Tohama I]
 gi|33573835|emb|CAE38143.1| putative GTP-binding protein [Bordetella parapertussis]
 gi|33576586|emb|CAE33664.1| putative GTP-binding protein [Bordetella bronchiseptica RB50]
 gi|332382610|gb|AEE67457.1| GTP-binding protein EngA [Bordetella pertussis CS]
 gi|401777817|emb|CCJ63158.1| putative GTP-binding protein [Bordetella pertussis 18323]
 gi|408443587|emb|CCJ50257.1| putative GTP-binding protein [Bordetella parapertussis Bpp5]
 gi|408447063|emb|CCJ58735.1| putative GTP-binding protein [Bordetella bronchiseptica MO149]
 gi|410565227|emb|CCN22780.1| putative GTP-binding protein [Bordetella bronchiseptica 1289]
 gi|410572304|emb|CCN20576.1| putative GTP-binding protein [Bordetella bronchiseptica D445]
 gi|410587097|emb|CCN02127.1| putative GTP-binding protein [Bordetella bronchiseptica Bbr77]
          Length = 451

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/431 (52%), Positives = 310/431 (71%), Gaps = 7/431 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G   F++IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDTPFLVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R G+   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILAEMARQTRQAIAEADVVVFLVDARAGVNAHDHEIARLLRKSGQQRVLLAVNK 123

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
           +E +   + + DF+ELG+G PH ISA +G+GI + +E  L+  +  P     + ++    
Sbjct: 124 AEGMGVGNATGDFHELGLGEPHPISAAHGDGIVDLIEIALSGLVAPPADTGEQLEQDVVD 183

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
           H I   K+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRD+I+  FE + +KY LIDT
Sbjct: 184 HRI---KLAIVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDAIEIDFERDGRKYTLIDT 240

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K FE IEKFSVIKTL++I  +NVV+L++DAQ  +S QD +IA F+ E+GR+++
Sbjct: 241 AGLRKRGKVFEAIEKFSVIKTLQAIEASNVVLLMIDAQAEVSEQDAHIAGFVLETGRAVV 300

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +  +QR+ I+   ++KL FL FA  + ISA+K   +   ++S+N  + ++  
Sbjct: 301 VAINKWDGLDSDQRERIEREFQRKLRFLGFARMHTISALKGQGVKPLLKSVNAAHAAAFA 360

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            LST R+TR L +A++  PP RK + RPK+RYAHQGG+NPP+IVIHGN L  + + Y+RY
Sbjct: 361 KLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLIVIHGNALDAVPDSYRRY 420

Query: 418 LEKYFYRTFSL 428
           LE  F   F L
Sbjct: 421 LETRFRNAFDL 431


>gi|381401188|ref|ZP_09926102.1| GTP-binding protein Der [Kingella kingae PYKK081]
 gi|380833803|gb|EIC13657.1| GTP-binding protein Der [Kingella kingae PYKK081]
          Length = 489

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 303/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D +IF+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSPRPVFLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N  + + +FYEL +G P++IS  +G+G+   +E++L    P       +E  N H 
Sbjct: 121 GEGGNRPVLAAEFYELALGEPYVISGAHGDGVYYLIEDVLE-NFPDAS---DEEPENKHP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE +NK + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDNKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L++ 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA  +FISA+K   I+   +SI   Y+++ I +
Sbjct: 293 VNKWDGISDERREQVKRDIARKLYFLDFAKLHFISALKEKGIDGLFDSIQAAYNAAFIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SA++   P R  L+RPK+RYAHQGG NPP+IVIHGN L  IG+ Y RYL 
Sbjct: 353 PTPKITRVLQSAVERQQPPRAGLVRPKMRYAHQGGSNPPVIVIHGNSLHAIGDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|254804723|ref|YP_003082944.1| GTP-binding protein EngA [Neisseria meningitidis alpha14]
 gi|416177695|ref|ZP_11610064.1| GTP-binding protein [Neisseria meningitidis M6190]
 gi|416192597|ref|ZP_11616703.1| GTP-binding protein [Neisseria meningitidis ES14902]
 gi|421544217|ref|ZP_15990295.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM140]
 gi|421546327|ref|ZP_15992376.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM183]
 gi|421552621|ref|ZP_15998595.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM576]
 gi|421561020|ref|ZP_16006873.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2657]
 gi|421567289|ref|ZP_16013025.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3001]
 gi|433492340|ref|ZP_20449434.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM586]
 gi|433502681|ref|ZP_20459646.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM126]
 gi|254668265|emb|CBA05137.1| putative GTP-binding protein [Neisseria meningitidis alpha14]
 gi|254673335|emb|CBA08527.1| putative GTP-binding protein [Neisseria meningitidis alpha275]
 gi|325132265|gb|EGC54958.1| GTP-binding protein [Neisseria meningitidis M6190]
 gi|325137764|gb|EGC60339.1| GTP-binding protein [Neisseria meningitidis ES14902]
 gi|402324062|gb|EJU59500.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM183]
 gi|402324329|gb|EJU59765.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM140]
 gi|402331253|gb|EJU66594.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM576]
 gi|402339500|gb|EJU74716.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2657]
 gi|402344300|gb|EJU79441.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3001]
 gi|432229129|gb|ELK84822.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM586]
 gi|432240777|gb|ELK96308.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM126]
          Length = 485

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|385328173|ref|YP_005882476.1| putative GTP-binding protein EngA [Neisseria meningitidis alpha710]
 gi|308389025|gb|ADO31345.1| putative GTP-binding protein EngA [Neisseria meningitidis alpha710]
 gi|389606059|emb|CCA44972.1| GTP-binding protein engA [Neisseria meningitidis alpha522]
          Length = 485

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERKGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|404378735|ref|ZP_10983820.1| GTPase Der [Simonsiella muelleri ATCC 29453]
 gi|404294960|gb|EFG31543.2| GTPase Der [Simonsiella muelleri ATCC 29453]
          Length = 501

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/431 (52%), Positives = 303/431 (70%), Gaps = 13/431 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 13  MKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPGLTRDRHYGHGRVGSKPYLVVDTGGF 72

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D +IF+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 73  EPVVDSGILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSSRPVFLAVNK 132

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKF--FKKKEFTNI 177
            E  N  I + +FYEL +G P++IS  +G+G+   +E++L      +KF     ++  N 
Sbjct: 133 GEGGNRPILAAEFYELALGEPYVISGAHGDGVYYLIEDVL------EKFPDTSDEQPENK 186

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
           H +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDT
Sbjct: 187 HPV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDT 242

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R K  E +EKFSVIK +++I  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+
Sbjct: 243 AGVRKRGKVDEAVEKFSVIKAMQAIEAANVAVLVLDAQQDIADQDATIAGFALEAGRALV 302

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + VNKWD I   +R  IK +I +KL FL FA F++ISA+K   I+   +SI   YD++ I
Sbjct: 303 IAVNKWDGISEERRNDIKRDIARKLYFLDFAKFHYISALKEKGIDGLFDSIQAAYDAAFI 362

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            + T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IVIHGN L  IG+ Y RY
Sbjct: 363 KMPTPKITRVLQSAIERQQPPRAGLMRPKMRYAHQGGMNPPVIVIHGNSLHAIGDSYTRY 422

Query: 418 LEKYFYRTFSL 428
           L + F + F+L
Sbjct: 423 LTQTFRKAFNL 433


>gi|340787103|ref|YP_004752568.1| ribosomal RNA large subunit methyltransferase N [Collimonas
           fungivorans Ter331]
 gi|340552370|gb|AEK61745.1| Ribosomal RNA large subunit methyltransferase N [Collimonas
           fungivorans Ter331]
          Length = 391

 Score =  475 bits (1223), Expect = e-131,   Method: Composition-based stats.
 Identities = 220/341 (64%), Positives = 270/341 (79%), Gaps = 3/341 (0%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRAKQL +WIH+FG  DF+ MTDL+ SLR KL     I AP ++SD  S DGTR
Sbjct: 21  ELGEKPFRAKQLLRWIHQFGAHDFDAMTDLAKSLRDKLATRAMIAAPAVISDHTSTDGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETVFIPE+NR TLCISTQ GCA+NC FCSTG+QGF RNLTVGEIIGQL
Sbjct: 81  KWLLDVGQGNAVETVFIPEENRGTLCISTQAGCAVNCRFCSTGKQGFSRNLTVGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF+LR+ K I+   +G+RQITN+VMMGMGEPLLNY+ T+ ALKL+L D+AYGLSRR 
Sbjct: 141 WMAEFELRKSKGIEPGHKGERQITNVVMMGMGEPLLNYEPTVTALKLMLDDNAYGLSRRR 200

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMIDKL+Q+C V +AVSLHASN+ LR+ LVP++KKYPL++L+ AC RY+ +
Sbjct: 201 VTLSTSGVVPMIDKLSQDCAVAMAVSLHASNDTLRDGLVPLNKKYPLRDLMAACKRYLEF 260

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNK--ILTSCKINLIPFNCFPNSNLICSK 831
           +PR  ITFEYCML G+NDTD HA ELI+L++ +       CK NLIPFN FP S L  S 
Sbjct: 261 APRDFITFEYCMLDGVNDTDAHARELIALVQGHAGGPAVPCKFNLIPFNPFPESGLKRSN 320

Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           N RIK FA+ILM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 321 NPRIKAFAQILMDAGIVTTVRKTRGDDIDAACGQLAGEVQD 361


>gi|416213868|ref|ZP_11622561.1| GTP-binding protein [Neisseria meningitidis M01-240013]
 gi|325144121|gb|EGC66428.1| GTP-binding protein [Neisseria meningitidis M01-240013]
          Length = 536

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E IL       + F + E     +
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 224

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 225 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 283

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 284 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 343

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 344 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 403

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 404 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 463

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 464 QTFRKAFNL 472


>gi|59800867|ref|YP_207579.1| GTP-binding protein EngA [Neisseria gonorrhoeae FA 1090]
 gi|8134430|sp|O87407.1|DER_NEIG1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|3722226|gb|AAC63508.1| essential Gc protein [Neisseria gonorrhoeae]
 gi|59717762|gb|AAW89167.1| putative GTP-binding protein [Neisseria gonorrhoeae FA 1090]
          Length = 485

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/429 (51%), Positives = 303/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + L+GRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K + +IDTGGF
Sbjct: 1   MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  + ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L +A++   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|261379855|ref|ZP_05984428.1| ribosome-associated GTPase EngA [Neisseria subflava NJ9703]
 gi|284797551|gb|EFC52898.1| ribosome-associated GTPase EngA [Neisseria subflava NJ9703]
          Length = 485

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 307/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F+ E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFVLEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|254670450|emb|CBA06089.1| putative GTP-binding protein [Neisseria meningitidis alpha153]
          Length = 536

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E IL       + F + E     +
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 224

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 225 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 283

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 284 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 343

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 344 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 403

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 404 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 463

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 464 QTFRKAFNL 472


>gi|254493337|ref|ZP_05106508.1| GTP-binding protein engA [Neisseria gonorrhoeae 1291]
 gi|268598604|ref|ZP_06132771.1| GTP-binding protein engA [Neisseria gonorrhoeae MS11]
 gi|268600957|ref|ZP_06135124.1| GTP-binding protein engA [Neisseria gonorrhoeae PID18]
 gi|268603264|ref|ZP_06137431.1| GTP-binding protein engA [Neisseria gonorrhoeae PID1]
 gi|268681744|ref|ZP_06148606.1| GTP-binding protein engA [Neisseria gonorrhoeae PID332]
 gi|268683971|ref|ZP_06150833.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-92-679]
 gi|268686216|ref|ZP_06153078.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-93-1035]
 gi|226512377|gb|EEH61722.1| GTP-binding protein engA [Neisseria gonorrhoeae 1291]
 gi|268582735|gb|EEZ47411.1| GTP-binding protein engA [Neisseria gonorrhoeae MS11]
 gi|268585088|gb|EEZ49764.1| GTP-binding protein engA [Neisseria gonorrhoeae PID18]
 gi|268587395|gb|EEZ52071.1| GTP-binding protein engA [Neisseria gonorrhoeae PID1]
 gi|268622028|gb|EEZ54428.1| GTP-binding protein engA [Neisseria gonorrhoeae PID332]
 gi|268624255|gb|EEZ56655.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-92-679]
 gi|268626500|gb|EEZ58900.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-93-1035]
          Length = 500

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 220/429 (51%), Positives = 301/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + L+GRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K + +IDTGGF
Sbjct: 16  MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGF 75

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 76  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 135

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  + ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E     +
Sbjct: 136 GEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 188

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +  A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 189 KHPV-FAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 247

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 248 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 307

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 308 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 367

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L +A+    P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 368 PTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 427

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 428 QTFRKAFNL 436


>gi|194098169|ref|YP_002001217.1| GTP-binding protein EngA [Neisseria gonorrhoeae NCCP11945]
 gi|240013743|ref|ZP_04720656.1| GTP-binding protein EngA [Neisseria gonorrhoeae DGI18]
 gi|240016181|ref|ZP_04722721.1| GTP-binding protein EngA [Neisseria gonorrhoeae FA6140]
 gi|240120813|ref|ZP_04733775.1| GTP-binding protein EngA [Neisseria gonorrhoeae PID24-1]
 gi|385335350|ref|YP_005889297.1| GTP-binding protein EngA [Neisseria gonorrhoeae TCDC-NG08107]
 gi|238690187|sp|B4RKD2.1|DER_NEIG2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|193933459|gb|ACF29283.1| essential Gc protein [Neisseria gonorrhoeae NCCP11945]
 gi|317163893|gb|ADV07434.1| GTP-binding protein EngA [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 485

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 220/429 (51%), Positives = 301/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + L+GRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K + +IDTGGF
Sbjct: 1   MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  + ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E     +
Sbjct: 121 GEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +  A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 KHPV-FAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L +A+    P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|269214116|ref|ZP_05983629.2| ribosome-associated GTPase EngA [Neisseria cinerea ATCC 14685]
 gi|269144512|gb|EEZ70930.1| ribosome-associated GTPase EngA [Neisseria cinerea ATCC 14685]
          Length = 537

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 53  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 112

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 113 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 172

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL      +K  ++ +    H 
Sbjct: 173 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILEKFPEPEKEEEEAK----HP 228

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 229 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 284

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+++ QD  IA F  E+GR+L+V 
Sbjct: 285 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDVADQDATIAGFALEAGRALVVA 344

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 345 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 404

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 405 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 464

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 465 QTFRKAFNL 473



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 12/137 (8%)

Query: 174 FTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
            T   SI    +A+VG+PNVGKSTL N L      + +D PG TRD      +  +K Y+
Sbjct: 46  LTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYL 105

Query: 234 LIDTAGIRRRNKTFEVIEKFSVI-----KTLKSILEANVVILLLDAQQNISAQDINIANF 288
           +IDT G       FE +    ++     +TL+++ EA+ V+ L+D +  ++ QD  IA+ 
Sbjct: 106 VIDTGG-------FEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADR 158

Query: 289 IYESGRSLIVCVNKWDS 305
           + +S R + + VNK + 
Sbjct: 159 LRQSPRPVYLAVNKGEG 175


>gi|325265768|ref|ZP_08132455.1| ribosome-associated GTPase EngA [Kingella denitrificans ATCC 33394]
 gi|324982751|gb|EGC18376.1| ribosome-associated GTPase EngA [Kingella denitrificans ATCC 33394]
          Length = 489

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 300/429 (69%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM +QT QAI E+D +IF+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMARQTLQAIDEADAVIFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E     + + +FYEL +G PH+IS  +G+G+   +E +L    P  +   +++  N H 
Sbjct: 121 GEGGRRDVLAAEFYELALGEPHVISGAHGDGVYYLMEEVLE-NFPEAE---EEQPENKHP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L++ 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R  IK +I +KL FL FA F++ISA+K   I+   +SI   YD++ I +
Sbjct: 293 VNKWDGISEERRNDIKRDIARKLYFLDFAKFHYISALKERGIDGLFDSIQAAYDAAFIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IVIHGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQAPPRAGLVRPKMRYAHQGGMNPPVIVIHGNSLSAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|421563067|ref|ZP_16008889.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2795]
 gi|421906633|ref|ZP_16336526.1| GTP-binding protein engA [Neisseria meningitidis alpha704]
 gi|393292381|emb|CCI72468.1| GTP-binding protein engA [Neisseria meningitidis alpha704]
 gi|402341774|gb|EJU76947.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2795]
          Length = 485

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRSGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|333375652|ref|ZP_08467458.1| ribosome-associated GTPase EngA [Kingella kingae ATCC 23330]
 gi|332969954|gb|EGK08954.1| ribosome-associated GTPase EngA [Kingella kingae ATCC 23330]
          Length = 489

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 302/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG   +G K ++++DTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPGLTRDRHYGHAKVGSKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D +IF+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSPRPVFLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N  + + +FYEL +G P++IS  +G+G+   +E++L    P       +E  N H 
Sbjct: 121 GEGGNRPVLAAEFYELALGEPYVISGAHGDGVYYLIEDVLE-NFPDAS---DEEPENKHP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE +NK + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDNKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L++ 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA  +FISA+K   I+   +SI   Y+++ I +
Sbjct: 293 VNKWDGISDERREQVKRDIARKLYFLDFAKLHFISALKEKGIDGLFDSIQAAYNAAFIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SA++   P R  L+RPK+RYAHQGG NPP+IVIHGN L  IG+ Y RYL 
Sbjct: 353 PTPKITRVLQSAVERQQPPRAGLVRPKMRYAHQGGSNPPVIVIHGNSLHAIGDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|268594476|ref|ZP_06128643.1| GTP-binding protein engA [Neisseria gonorrhoeae 35/02]
 gi|268596471|ref|ZP_06130638.1| GTP-binding protein engA [Neisseria gonorrhoeae FA19]
 gi|291044231|ref|ZP_06569940.1| GTP-binding protein engA [Neisseria gonorrhoeae DGI2]
 gi|293399430|ref|ZP_06643583.1| ribosome-associated GTPase EngA [Neisseria gonorrhoeae F62]
 gi|268547865|gb|EEZ43283.1| GTP-binding protein engA [Neisseria gonorrhoeae 35/02]
 gi|268550259|gb|EEZ45278.1| GTP-binding protein engA [Neisseria gonorrhoeae FA19]
 gi|291011125|gb|EFE03121.1| GTP-binding protein engA [Neisseria gonorrhoeae DGI2]
 gi|291609999|gb|EFF39121.1| ribosome-associated GTPase EngA [Neisseria gonorrhoeae F62]
          Length = 502

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 220/429 (51%), Positives = 302/429 (70%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + L+GRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K + +IDTGGF
Sbjct: 18  MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGF 77

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 78  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 137

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  + ++ + +FYEL +G PH+IS  +G+G+   +E IL       + F + E     +
Sbjct: 138 GEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 190

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 191 -KHPVFAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 249

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 250 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 309

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 310 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 369

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L +A+    P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 370 PTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 429

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 430 QTFRKAFNL 438


>gi|319637814|ref|ZP_07992580.1| GTP-binding protein engA [Neisseria mucosa C102]
 gi|317400969|gb|EFV81624.1| GTP-binding protein engA [Neisseria mucosa C102]
          Length = 485

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 308/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE + K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  +V+EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDKVVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|253996245|ref|YP_003048309.1| GTP-binding protein EngA [Methylotenera mobilis JLW8]
 gi|253982924|gb|ACT47782.1| small GTP-binding protein [Methylotenera mobilis JLW8]
          Length = 484

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 227/429 (52%), Positives = 305/429 (71%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G    + ++++DTGGF
Sbjct: 1   MIPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPGLTRDRHYGRGIGASQPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP    GI+  M KQT QAI E+D IIF+VDGRQG+  QD  I N LR+S  P++L +NK
Sbjct: 61  EPHTDSGILKAMAKQTLQAIDEADAIIFLVDGRQGVSPQDMEIANRLRRSKCPVLLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  ++ S DF+ELG+G P  IS+ +G G+++ +E    + L   K  + +  T+   
Sbjct: 121 TEGMQKAVVSADFHELGLGYPLSISSAHGEGVRDIVE----LALENFKEVEDEPVTDYTG 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               KVAIVG+PNVGKSTL+N+LLGE RVI YD PGTTRDSI    E N K Y LIDTAG
Sbjct: 177 DRIPKVAIVGRPNVGKSTLVNALLGEERVIAYDEPGTTRDSIHIDLEKNGKHYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R + FE IEKFSVIKT+++I EANVVIL++DAQ+ I+ QD ++A +I ++GR+L+V 
Sbjct: 237 VRKRGRVFEAIEKFSVIKTIQAIEEANVVILVVDAQEGITEQDAHVAAYILDAGRALVVA 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  ++R  IK  I +KL FL FA F++ISA++   +    +S++  Y ++   L
Sbjct: 297 INKWDGLKEDERDWIKREIDRKLQFLDFAEFHYISALRKKGLPELFKSVDVAYKAAFAKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T ++TR LI A++ H P   K IRPKLRYAHQGG NPPI+VIHG+ +  + + Y R+LE
Sbjct: 357 ATPQLTRVLIDALQQHQPPISKGIRPKLRYAHQGGSNPPIVVIHGSHVDGVKDAYTRFLE 416

Query: 420 KYFYRTFSL 428
           K F RTF L
Sbjct: 417 KTFRRTFQL 425


>gi|225077176|ref|ZP_03720375.1| hypothetical protein NEIFLAOT_02231 [Neisseria flavescens
           NRL30031/H210]
 gi|224951524|gb|EEG32733.1| hypothetical protein NEIFLAOT_02231 [Neisseria flavescens
           NRL30031/H210]
          Length = 486

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 2   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 61

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 62  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 121

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 122 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEAA 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +  A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 175 KHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 234 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 294 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 354 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 413

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 414 QTFRKAFNL 422


>gi|218767960|ref|YP_002342472.1| GTP-binding protein EngA [Neisseria meningitidis Z2491]
 gi|421550399|ref|ZP_15996404.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69166]
 gi|433471007|ref|ZP_20428398.1| ribosome-associated GTPase EngA [Neisseria meningitidis 68094]
 gi|433475455|ref|ZP_20432796.1| ribosome-associated GTPase EngA [Neisseria meningitidis 88050]
 gi|433477334|ref|ZP_20434657.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70012]
 gi|433479360|ref|ZP_20436654.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63041]
 gi|433513205|ref|ZP_20469999.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63049]
 gi|433515350|ref|ZP_20472122.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2004090]
 gi|433517351|ref|ZP_20474100.1| ribosome-associated GTPase EngA [Neisseria meningitidis 96023]
 gi|433519572|ref|ZP_20476293.1| ribosome-associated GTPase EngA [Neisseria meningitidis 65014]
 gi|433521676|ref|ZP_20478371.1| ribosome-associated GTPase EngA [Neisseria meningitidis 61103]
 gi|433523737|ref|ZP_20480402.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97020]
 gi|433525877|ref|ZP_20482511.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69096]
 gi|433527961|ref|ZP_20484572.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3652]
 gi|433530135|ref|ZP_20486728.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3642]
 gi|433532392|ref|ZP_20488958.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2007056]
 gi|433533995|ref|ZP_20490540.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2001212]
 gi|433538726|ref|ZP_20495206.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70030]
 gi|433540705|ref|ZP_20497160.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63006]
 gi|26006740|sp|Q9JV01.1|DER_NEIMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|121051968|emb|CAM08277.1| putative GTP-binding protein [Neisseria meningitidis Z2491]
 gi|402330614|gb|EJU65961.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69166]
 gi|432209496|gb|ELK65463.1| ribosome-associated GTPase EngA [Neisseria meningitidis 68094]
 gi|432211273|gb|ELK67228.1| ribosome-associated GTPase EngA [Neisseria meningitidis 88050]
 gi|432216556|gb|ELK72437.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70012]
 gi|432217163|gb|ELK73032.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63041]
 gi|432248882|gb|ELL04306.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63049]
 gi|432253938|gb|ELL09274.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2004090]
 gi|432254360|gb|ELL09695.1| ribosome-associated GTPase EngA [Neisseria meningitidis 96023]
 gi|432255563|gb|ELL10892.1| ribosome-associated GTPase EngA [Neisseria meningitidis 65014]
 gi|432260449|gb|ELL15708.1| ribosome-associated GTPase EngA [Neisseria meningitidis 61103]
 gi|432260636|gb|ELL15894.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97020]
 gi|432262068|gb|ELL17313.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69096]
 gi|432266268|gb|ELL21456.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3652]
 gi|432268063|gb|ELL23235.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3642]
 gi|432268337|gb|ELL23508.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2007056]
 gi|432272505|gb|ELL27612.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2001212]
 gi|432274734|gb|ELL29821.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70030]
 gi|432277720|gb|ELL32766.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63006]
          Length = 485

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|421565128|ref|ZP_16010914.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3081]
 gi|402345457|gb|EJU80574.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3081]
          Length = 485

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|421863088|ref|ZP_16294789.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309379417|emb|CBX21984.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 485

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L +A++   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|319794354|ref|YP_004155994.1| ribosome-associated GTPase enga [Variovorax paradoxus EPS]
 gi|315596817|gb|ADU37883.1| ribosome-associated GTPase EngA [Variovorax paradoxus EPS]
          Length = 447

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/430 (52%), Positives = 305/430 (70%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA+Y GLTRDRHYG G +GK  FI+IDTGGF
Sbjct: 1   MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADYAGLTRDRHYGNGRLGKHEFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R+GL  QD  I N LR+ G+P VL  NK
Sbjct: 61  EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++    L DFYELG G+ H +SA +G G+++ +E  L +E P        E      
Sbjct: 121 AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVE--LALE-PLNLPDPDDETDEDDV 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ LIDTAG
Sbjct: 178 NKPIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQRFELIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++ 
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVIA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++   QR+ I+  I+ +L FL FA  +FISAIK   +    ++I   + S+   +
Sbjct: 298 INKWDAVDSYQREQIQRQIETRLPFLKFASLHFISAIKRQGLGPVWQAIAQAHKSATRKM 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L+ A++   P R  + RPKLRYAHQGG NPP+I+IHGN L+++ + YKR+LE
Sbjct: 358 STPVLTRLLLEAVQFQAPQRGGMFRPKLRYAHQGGMNPPVIIIHGNSLEHVTDAYKRFLE 417

Query: 420 KYFYRTFSLI 429
             F + F L+
Sbjct: 418 GRFRKEFDLV 427


>gi|418288058|ref|ZP_12900578.1| GTP-binding protein [Neisseria meningitidis NM233]
 gi|418290324|ref|ZP_12902487.1| GTP-binding protein [Neisseria meningitidis NM220]
 gi|372201766|gb|EHP15649.1| GTP-binding protein [Neisseria meningitidis NM220]
 gi|372202661|gb|EHP16442.1| GTP-binding protein [Neisseria meningitidis NM233]
          Length = 536

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 224

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 225 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 283

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 284 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 343

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 344 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 403

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 404 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 463

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 464 QTFRKAFNL 472



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 12/140 (8%)

Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
           ++  T   SI    +A+VG+PNVGKSTL N L      + +D PG TRD      +  +K
Sbjct: 42  ERHLTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSK 101

Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVI-----KTLKSILEANVVILLLDAQQNISAQDINI 285
            Y++IDT G       FE +    ++     +TL+++ EA+ V+ L+D +  ++ QD  I
Sbjct: 102 PYLVIDTGG-------FEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKII 154

Query: 286 ANFIYESGRSLIVCVNKWDS 305
           A+ + +S R + + VNK + 
Sbjct: 155 ADRLRQSPRPVYLAVNKGEG 174


>gi|385337795|ref|YP_005891668.1| GTP-binding protein engA [Neisseria meningitidis WUE 2594]
 gi|319410209|emb|CBY90548.1| GTP-binding protein engA [Neisseria meningitidis WUE 2594]
          Length = 536

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52  MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 224

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 225 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 283

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 284 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 343

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 344 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 403

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 404 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 463

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 464 QTFRKAFNL 472



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 12/140 (8%)

Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
           ++  T   SI    +A+VG+PNVGKSTL N L      + +D PG TRD      +  +K
Sbjct: 42  ERHLTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSK 101

Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVI-----KTLKSILEANVVILLLDAQQNISAQDINI 285
            Y++IDT G       FE +    ++     +TL+++ EA+ V+ L+D +  ++ QD  I
Sbjct: 102 PYLVIDTGG-------FEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKII 154

Query: 286 ANFIYESGRSLIVCVNKWDS 305
           A+ + +S R + + VNK + 
Sbjct: 155 ADRLRQSPRPVYLAVNKGEG 174


>gi|421554603|ref|ZP_16000544.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98008]
 gi|402332563|gb|EJU67888.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98008]
          Length = 485

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/429 (51%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGTHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+++ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDVADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L +A++   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|241758625|ref|ZP_04756739.1| ribosome-associated GTPase EngA [Neisseria flavescens SK114]
 gi|241321136|gb|EER57332.1| ribosome-associated GTPase EngA [Neisseria flavescens SK114]
          Length = 485

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 306/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            ++   A++G+PNVGKSTL+N++LGE RVI ++  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFNMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   ESI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L SAI+   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|261400171|ref|ZP_05986296.1| ribosome-associated GTPase EngA [Neisseria lactamica ATCC 23970]
 gi|269210170|gb|EEZ76625.1| ribosome-associated GTPase EngA [Neisseria lactamica ATCC 23970]
          Length = 485

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 220/429 (51%), Positives = 305/429 (71%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VDGR GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            E  N ++ + +FYEL +G+P++IS  +G+G+   +E+IL       + F + E     +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEAA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +  A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDTAG
Sbjct: 174 KHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSVIK ++++  ANV +L+LDAQQ+I+ QD  IA F  E+GR+L+V 
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD I   +R+ +K +I +KL FL FA F+FISA+K   I+   +SI   Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T +ITR L +A++   P R  L+RPK+RYAHQGG NPP+IV+HGN L  I + Y RYL 
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLT 412

Query: 420 KYFYRTFSL 428
           + F + F+L
Sbjct: 413 QTFRKAFNL 421


>gi|365093278|ref|ZP_09330344.1| GTP-binding protein Der [Acidovorax sp. NO-1]
 gi|363414452|gb|EHL21601.1| GTP-binding protein Der [Acidovorax sp. NO-1]
          Length = 447

 Score =  471 bits (1212), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 223/431 (51%), Positives = 309/431 (71%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R G+  QD  I N+LR+ G+P VLV NK
Sbjct: 61  EPDASTGIYKEMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +   + L +FYELG+G+ + +SA +G GI++ +E  L  ++LP        E  +  
Sbjct: 121 AEGMLEGVQLAEFYELGLGDVYPVSAAHGQGIRSLVEIALEPLQLPDPD---DSEVESDK 177

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           SI  IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ L+DTA
Sbjct: 178 SI--IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR+++V
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVV 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR++++ +I+ +L FL FA  +FISA K   +     SI   + ++   
Sbjct: 296 AVNKWDAVDDYQRQLLERSIETRLAFLKFASLHFISAKKRQGLGPLWASIAQAHKAATCK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L+ A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MSTPVLTRLLLEAVQFQSPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EGRFRKEFDLV 426


>gi|399018044|ref|ZP_10720230.1| histidyl-tRNA synthetase [Herbaspirillum sp. CF444]
 gi|398102009|gb|EJL92201.1| histidyl-tRNA synthetase [Herbaspirillum sp. CF444]
          Length = 448

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/378 (57%), Positives = 285/378 (75%), Gaps = 5/378 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D +NGDNL+LRPE TASV+R+ +E+NL YDGPKRLWY+GPMFRHE
Sbjct: 62   GEVTDIVEKEMYSFTDSMNGDNLTLRPENTASVVRAALEHNLTYDGPKRLWYAGPMFRHE 121

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPDIDAELI+MC RLW +L L++I LELNSIGN  ER K
Sbjct: 122  RPQRGRYRQFHQVGAEALGFTGPDIDAELIMMCQRLWDDLGLQDIRLELNSIGNAEERNK 181

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y ++HK+      D +  L+ N LR+LD+KN  +++++  APKLLDYL ++S 
Sbjct: 182  HRADLIAYFEQHKE--LLDADAQRRLHSNPLRILDTKNPAMQDMVNGAPKLLDYLGEESR 239

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QKILN+NNI + IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD LI+ 
Sbjct: 240  THFEGVQKILNHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEM 299

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+G+ERL+EL+K     +   +QCDIY+VH G+ A+L++FV++E LR+ 
Sbjct: 300  FGGKPTPACGFAMGVERLLELMKASGEQYA-PNQCDIYLVHQGEAAQLQSFVMAERLRSA 358

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL V+L+C   +   SFKSQMK+A+AS A FA IIGE+E+ N T  +K+LR    +    
Sbjct: 359  GLDVVLHCASASAGGSFKSQMKKADASGAAFAVIIGEDEVTNATATVKNLRAAEGESN-- 416

Query: 1228 QISISFKDAENYFYKKII 1245
            Q+++ F    +Y   +I+
Sbjct: 417  QVTVPFDGVPDYVVDQIV 434


>gi|34498989|ref|NP_903204.1| GTP-binding protein EngA [Chromobacterium violaceum ATCC 12472]
 gi|41017007|sp|Q7NS92.1|DER_CHRVO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|34104839|gb|AAQ61196.1| probable GTP-binding protein [Chromobacterium violaceum ATCC 12472]
          Length = 469

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 307/429 (71%), Gaps = 10/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG+G +G+K ++++DTGGF
Sbjct: 1   MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGQGRVGEKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V +GI+ EM KQT QA+ E+D ++F+VDGR GL  QDK+I N LR+  +P+ L +NK
Sbjct: 61  EPVVDEGILFEMAKQTLQAVDEADAVVFLVDGRAGLTPQDKIIANRLRQLDRPVFLAVNK 120

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  +I+  +F+EL +G P +ISA +G+G++  +E +L      + F  + E  +   
Sbjct: 121 AEGMKHAIAGAEFHELALGEPLVISAAHGDGVRELMELVL------EGFPDEVEEEDSR- 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
             + K A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE     Y +IDTAG
Sbjct: 174 --HPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFEREGHTYTIIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E++EKFSVIKT+K+I +ANV +L+LDAQ +IS QD  IA F  E+GR+L+V 
Sbjct: 232 VRRRAKVNEMLEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD++   Q++ ++  I +KLNFL FA F++ISAI+   +    +SI+  Y +++  L
Sbjct: 292 VNKWDNLDGEQKENVRREIARKLNFLDFAKFHYISAIEGRGVADLFKSIDEAYRAAMSKL 351

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T ++TR L  A++   P R  LIRPK+RYAHQGG+NPP+IV+HGN L  I   Y RYLE
Sbjct: 352 ATPKLTRVLQVALERQQPPRSGLIRPKMRYAHQGGQNPPVIVVHGNALDSIPASYTRYLE 411

Query: 420 KYFYRTFSL 428
             F + F L
Sbjct: 412 HTFRKVFKL 420


>gi|398807433|ref|ZP_10566311.1| ribosome-associated GTPase EngA [Variovorax sp. CF313]
 gi|398089443|gb|EJL79959.1| ribosome-associated GTPase EngA [Variovorax sp. CF313]
          Length = 447

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 223/430 (51%), Positives = 305/430 (70%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDRHYG G +GK  FI+IDTGGF
Sbjct: 1   MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADFAGLTRDRHYGNGRLGKHEFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R+GL  QD  I N LR+ G+P VL  NK
Sbjct: 61  EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++    L DFYELG G+ H +SA +G G+++ +E  L +E P        E      
Sbjct: 121 AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVE--LALE-PLNLPDPDDEADEDEV 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ LIDTAG
Sbjct: 178 NKPIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQRFELIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ + FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++ 
Sbjct: 238 LRRKGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVIA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++   QR+ I+  I+ +L FL FA  +FISAIK   +    ++I   + S+   +
Sbjct: 298 INKWDAVDSYQREQIQRQIETRLPFLKFAALHFISAIKRQGLGPVWQAIAQAHKSATRKM 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L+ A++   P R  + RPKLRYAHQGG NPP+IVIHGN L+++ + YKR+LE
Sbjct: 358 STPVLTRLLLEAVQFQAPKRGGMYRPKLRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFLE 417

Query: 420 KYFYRTFSLI 429
             F + F L+
Sbjct: 418 GRFRKEFDLV 427


>gi|238021706|ref|ZP_04602132.1| hypothetical protein GCWU000324_01609 [Kingella oralis ATCC 51147]
 gi|237866320|gb|EEP67362.1| hypothetical protein GCWU000324_01609 [Kingella oralis ATCC 51147]
          Length = 489

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/431 (51%), Positives = 299/431 (69%), Gaps = 13/431 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1   MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+HEM KQT QA+ E+D ++F+VD R GL  QDK+I + LR+S +P+ L +NK
Sbjct: 61  EPVVDSGILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT--NI 177
            E     + + +FYEL +G PH+IS  +G+G+   +E IL      + F    E    N 
Sbjct: 121 GEGGRRDVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL------ENFPDADETQPENK 174

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
           H +     A++G+PNVGKSTL+N++LGE RVI +D  GTTRDSI   FE   K + +IDT
Sbjct: 175 HPV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDT 230

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR K  E +EKFSVIK +++I  AN+ +L+LDAQQ+I+ QD  IA F  E+GR+L+
Sbjct: 231 AGVRRRGKVDEAVEKFSVIKAMQAIEAANIAVLVLDAQQDIADQDATIAGFALEAGRALV 290

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + VNKWD I   +R  IK +I +KL FL FA F++ISA+K   I+   +SI   Y+++ I
Sbjct: 291 IAVNKWDGISEERRNDIKRDIARKLYFLDFAKFHYISALKERGIDGLFDSIQAAYNAAFI 350

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
           ++ T +ITR L SA++   P R  L+RPK+RYAHQGG NPP+IVIHGN L  I + Y RY
Sbjct: 351 NMPTPKITRVLQSAVERQAPPRAGLVRPKMRYAHQGGMNPPVIVIHGNSLGAISDSYTRY 410

Query: 418 LEKYFYRTFSL 428
           L + F + F+L
Sbjct: 411 LTQTFRKAFNL 421


>gi|300312256|ref|YP_003776348.1| histidyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300075041|gb|ADJ64440.1| histidyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 451

 Score =  468 bits (1204), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/379 (57%), Positives = 282/379 (74%), Gaps = 4/379 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D +NGDNL+LRPE TA V+R+ +E+NL YDGPKRLWY GPMFRHE
Sbjct: 62   GEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRHE 121

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPDIDAELI+MC RLW +L L +I LELNSIGN  ER K
Sbjct: 122  RPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERNK 181

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y ++HKD      D +  L+ N LR+LD+KN  ++E++  APKLLDYL ++S 
Sbjct: 182  HRADLIAYFEQHKD--LLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESR 239

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QKIL +NNI + IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD LI+ 
Sbjct: 240  AHFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEM 299

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+G+ERL+EL+K     +   +QCD+Y+VH G++A+L++FVL+E LRT 
Sbjct: 300  FGGKPTPACGFAMGVERLLELMKASGEQYA-PNQCDVYLVHQGEDAQLQSFVLAERLRTA 358

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR-NKYEDPTL 1226
            GL V+L+C  +N   SFK+QMKRA+AS A FA IIGE+E+   T  +K +R    E+   
Sbjct: 359  GLDVVLHCASSNGGGSFKAQMKRADASGAAFAVIIGEDELKGGTATVKHMREGNAEEGRA 418

Query: 1227 KQISISFKDAENYFYKKII 1245
             Q S+ F    +Y  ++I+
Sbjct: 419  NQNSLPFDGVVDYIVEQIV 437


>gi|239815182|ref|YP_002944092.1| GTP-binding protein EngA [Variovorax paradoxus S110]
 gi|259645888|sp|C5CXH0.1|DER_VARPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|239801759|gb|ACS18826.1| small GTP-binding protein [Variovorax paradoxus S110]
          Length = 447

 Score =  468 bits (1204), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/430 (51%), Positives = 302/430 (70%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDRHYG G +GK  FI+IDTGGF
Sbjct: 1   MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADFAGLTRDRHYGNGRLGKHEFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R+GL  QD  I N LR+ G+P VL  NK
Sbjct: 61  EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++    L DFYELG G+ H +SA +G G+++ +E  L    P        E      
Sbjct: 121 AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVELALA---PLNLPDPDDEADEDDV 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ LIDTAG
Sbjct: 178 NKPIKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERNGQRFELIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I  A+VV+LLLDA Q ++ QD +IA +I ESGR++++ 
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIESASVVLLLLDATQGVTDQDAHIAGYILESGRAVVIA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++   QR+ I+  I+ +L FL FA  +FISAIK   +    ++I   + S+   +
Sbjct: 298 INKWDAVDSYQREQIQRQIETRLPFLKFASLHFISAIKRQGLGPVWQAIAQAHKSATRKM 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L+ A++   P R  + RPKLRYAHQGG NPP+I+IHGN L+++   YKR+LE
Sbjct: 358 STPVLTRLLLEAVQFQSPKRAGMFRPKLRYAHQGGMNPPVIIIHGNSLEHVTEAYKRFLE 417

Query: 420 KYFYRTFSLI 429
             F + F L+
Sbjct: 418 GRFRKEFDLV 427


>gi|319763709|ref|YP_004127646.1| ribosome-associated gtpase enga [Alicycliphilus denitrificans BC]
 gi|330824028|ref|YP_004387331.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601]
 gi|317118270|gb|ADV00759.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans BC]
 gi|329309400|gb|AEB83815.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601]
          Length = 447

 Score =  468 bits (1204), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/431 (52%), Positives = 303/431 (70%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  FI+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGKHEFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R GL  QD  I  +LR+ G+P VL  NK
Sbjct: 61  EPDASSGIYREMAKQTQQAVAEADVVIFVVDVRGGLSAQDHDIAKYLRRLGKPCVLAGNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +  S  L +FYELG+G  H +SA +G G+++ +E  L ++ LP     +  E   + 
Sbjct: 121 AEGMQDSAHLAEFYELGLGEVHPVSAAHGQGVRSLVELALKSLALP-----EAGEGDVVA 175

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ LIDTA
Sbjct: 176 EANVIRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQKFELIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVI 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++    R+ ++ +I+ +L+FL FA  +FISA+K   I     SI   Y S+   
Sbjct: 296 AVNKWDAVDDYGRQQLERSIETRLSFLKFAPLHFISAMKRQGIGPLWASIVQAYKSANRK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L  A++   P R  + RPKLRYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLQEAVQFQSPKRSGMFRPKLRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F LI
Sbjct: 416 EGRFRKEFDLI 426


>gi|422321708|ref|ZP_16402753.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
 gi|317403342|gb|EFV83855.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
          Length = 451

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 307/429 (71%), Gaps = 3/429 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G+  FI+IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R GL   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIATLLRKSGQQRVLLAVNK 123

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E + +  ++ +F+ELG+G P+ ISA +G+GI + +E  L          ++      H 
Sbjct: 124 AEGMGAGAAIAEFHELGLGQPYPISAAHGDGIVDLIELALQDLAEPPAEEEEPAEEGEHD 183

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  FE + ++Y LIDTAG
Sbjct: 184 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAG 242

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE +EKFSVIKTL++I  +NVV+L+LDAQ  IS QD +IA F+ E+GR+++V 
Sbjct: 243 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVLETGRAVVVA 302

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   +++ I+    +KL FLSFA  + ISA++   I   ++S+N  + ++   L
Sbjct: 303 VNKWDGLDGEEKERIEREFMRKLRFLSFARVHTISALRGQGIKPLLKSVNAAHAAAFAKL 362

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L +A++  PP RK + RPK+RYAHQGG+NPP++VIHGN L  + + Y+RYLE
Sbjct: 363 STPKLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAVPDSYRRYLE 422

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 423 TRFRNAFDL 431


>gi|409406677|ref|ZP_11255139.1| histidyl-tRNA synthetase [Herbaspirillum sp. GW103]
 gi|386435226|gb|EIJ48051.1| histidyl-tRNA synthetase [Herbaspirillum sp. GW103]
          Length = 470

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/379 (57%), Positives = 283/379 (74%), Gaps = 4/379 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D +NGDNL+LRPE TA V+R+ +E+NL YDGPKRLWY GPMFRHE
Sbjct: 81   GEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRHE 140

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPDIDAELI+MC RLW +L L +I LELNSIGN  ER K
Sbjct: 141  RPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERNK 200

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y ++HK+      D +  L+ N LR+LD+KN  ++E++  APKLLDYL ++S 
Sbjct: 201  HRADLIAYFEQHKE--LLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESR 258

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QKIL +NNI + IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD LI+ 
Sbjct: 259  AHFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEM 318

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+G+ERL+EL+K  N      +QCD+Y+VH G++A+L++FVL+E LRT 
Sbjct: 319  FGGKPTPACGFAMGVERLLELMKA-NGEQYAPNQCDVYLVHQGEDAQLQSFVLAERLRTA 377

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR-NKYEDPTL 1226
            GL V+L+C  +N   SFK+QMKRA+AS A FA IIGE+E+   T  +K +R    E+   
Sbjct: 378  GLDVVLHCASSNGGGSFKAQMKRADASGAAFAVIIGEDELKAGTATVKHMREGNAEEGRA 437

Query: 1227 KQISISFKDAENYFYKKII 1245
             Q +++F    +Y  ++I+
Sbjct: 438  NQSNMAFDGVVDYIVEQIV 456


>gi|351731464|ref|ZP_08949155.1| GTP-binding protein Der [Acidovorax radicis N35]
          Length = 447

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/431 (51%), Positives = 305/431 (70%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R G+  QD  I N+LR+ G+P VLV NK
Sbjct: 61  EPDASSGIYKEMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +   + L +FYELG+G  + +SA +G GI++ ++  L  ++LP            I 
Sbjct: 121 AEGMLEGVQLAEFYELGLGEVYPVSAAHGQGIRSLVDIALEPLQLPEPDDSDGDPDKGI- 179

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ L+DTA
Sbjct: 180 ----IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR+++V
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVV 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR++++ +I+ +L FL FA  +FISA K   +     SI   + ++   
Sbjct: 296 AVNKWDAVDDYQRQLLERSIETRLAFLKFASLHFISAKKRQGLGPLWTSIAQAHKAATCK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L+ A++   P R  + RPKLRYAHQGG NPP+IV+HGN L+++ + YKR+L
Sbjct: 356 MSTPILTRLLLEAVQFQSPKRAGMFRPKLRYAHQGGMNPPVIVVHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EGRFRKEFDLV 426


>gi|393757568|ref|ZP_10346392.1| GTP-binding protein Der [Alcaligenes faecalis subsp. faecalis NCIB
           8687]
 gi|393165260|gb|EJC65309.1| GTP-binding protein Der [Alcaligenes faecalis subsp. faecalis NCIB
           8687]
          Length = 452

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/432 (51%), Positives = 307/432 (71%), Gaps = 11/432 (2%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGR NVGKSTLFNRLT SR ALVAN+PGLTRDRHYGEG +G + +I++DTGGFE
Sbjct: 7   KPVVALVGRANVGKSTLFNRLTRSRAALVANFPGLTRDRHYGEGRVGSRPYIVVDTGGFE 66

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
           P  K G++ EM +QT+QAI E+D+++F+VD R+G+   D  I   LRK GQ ++L +NK+
Sbjct: 67  PVAKTGMLLEMARQTQQAIAEADVVVFLVDAREGVNALDLEIAQLLRKLGQKVLLAVNKA 126

Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNF----LENILTIELPYKKFFKKKEFTN 176
           E +   +  ++F+ELG+G P++ISA +G+G++      LE + + E P +     ++F +
Sbjct: 127 EGMRYEAGGVEFHELGLGQPYLISASHGDGVEELINLALEQVPSPE-PDQDGQDDEQFQH 185

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
                 IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  FE N  +Y LID
Sbjct: 186 -----RIKLAIVGRPNVGKSTLINTLVGEERVIAFDQPGTTRDAIEIEFERNGVEYTLID 240

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+R+R K FE +EKFSVIKTL++I   NVV+L++DA   IS QD +IA F+ E+GR+L
Sbjct: 241 TAGLRKRGKVFEAVEKFSVIKTLQAIEACNVVLLMIDAHTEISDQDASIAGFVVETGRAL 300

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           +V +NKWD +   QR+ IK    +KL FL+FA  + +SA+K   IN  ++S+N  + ++ 
Sbjct: 301 VVGINKWDGLDEYQREWIKREFDRKLRFLNFAKMHTLSALKGQGINPLLKSVNEAHAAAF 360

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
             LST ++TR +  A++   P RK + RPKLRYAHQGG NPPI+VIHGN L  I + Y+R
Sbjct: 361 SKLSTPKLTRVMQEAVEQQQPPRKGIFRPKLRYAHQGGMNPPIVVIHGNALDAISDSYRR 420

Query: 417 YLEKYFYRTFSL 428
           YLE  F   F L
Sbjct: 421 YLESRFREAFKL 432


>gi|424776097|ref|ZP_18203082.1| GTP-binding protein Der [Alcaligenes sp. HPC1271]
 gi|422888557|gb|EKU30943.1| GTP-binding protein Der [Alcaligenes sp. HPC1271]
          Length = 452

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/432 (51%), Positives = 306/432 (70%), Gaps = 11/432 (2%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGR NVGKSTLFNRLT SR ALVAN+PGLTRDRHYGEG +G + +I++DTGGFE
Sbjct: 7   KPVVALVGRANVGKSTLFNRLTRSRAALVANFPGLTRDRHYGEGRVGSRPYIVVDTGGFE 66

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
           P  K G++ EM +QT+QAI E+D+++F+VD R+G+   D  I   LRK GQ ++L +NK+
Sbjct: 67  PVAKTGMLLEMARQTQQAIAEADVVVFLVDAREGVNALDLEIAQLLRKLGQKVLLAVNKA 126

Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNF----LENILTIELPYKKFFKKKEFTN 176
           E +   +  ++F+ELG+G P++ISA +G+G++      LE +   E P +      EF +
Sbjct: 127 EGMRYEAGGVEFHELGLGQPYLISASHGDGVEELINLALEQVPNPE-PEEDGQDDDEFQH 185

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
                 IK+AIVG+PNVGKSTLIN+L+GE+RVI +D PGTTRD+I+  FE N  +Y LID
Sbjct: 186 -----RIKLAIVGRPNVGKSTLINTLVGEDRVIAFDQPGTTRDAIEIEFERNGVEYTLID 240

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+R+R K FE +EKFSVIKTL++I   NVV+L++DA   IS QD +IA F+ E+GR+L
Sbjct: 241 TAGLRKRGKVFEAVEKFSVIKTLQAIEACNVVLLMIDAHTEISDQDASIAGFVVETGRAL 300

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           +V +NKWD +   QR+ IK    +KL FL+FA  + +SA+K   IN  ++S+N  + ++ 
Sbjct: 301 VVGINKWDGLDEYQREWIKREFDRKLRFLNFAKMHTLSALKGQGINPLLKSVNAAHAAAF 360

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
             LST ++TR +  A++   P RK + RPKLRYAHQGG NPPI+VIHGN L  I + Y+R
Sbjct: 361 SKLSTPKLTRVMQEAVEQQQPPRKGIFRPKLRYAHQGGMNPPIVVIHGNALDAISDSYRR 420

Query: 417 YLEKYFYRTFSL 428
           YLE  F   F L
Sbjct: 421 YLETRFREAFKL 432


>gi|359798964|ref|ZP_09301533.1| GTP-binding protein Der [Achromobacter arsenitoxydans SY8]
 gi|359363102|gb|EHK64830.1| GTP-binding protein Der [Achromobacter arsenitoxydans SY8]
          Length = 450

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/429 (52%), Positives = 305/429 (71%), Gaps = 4/429 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G   FI IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIAIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R G+   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQRVLLAVNK 123

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +    ++ +F+ELG+G P+ ISA +G+GI + +E  L  +L      ++      H 
Sbjct: 124 AEGMGLGPAISEFHELGLGQPYPISAAHGDGIVDLIELALK-DLAEPPAEEEPAEEGEHD 182

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTLIN+ +GE RVI +D PGTTRD+I+  FE + ++Y LIDTAG
Sbjct: 183 -HRIKLAIVGRPNVGKSTLINTFMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAG 241

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE +EKFSVIKTL++I  +NVV+L+LDAQ  IS QD +IA F+ E+GR+++V 
Sbjct: 242 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVLETGRAVVVA 301

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   +++ I+    +KL FLSFA  + ISA++   I   ++SIN  + ++   L
Sbjct: 302 VNKWDGLDGEEKERIEREFNRKLRFLSFARVHTISALRGQGIKPLLKSINSAHAAAFAKL 361

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L +A++  PP RK + RPK+RYAHQGG+NPP++VIHGN L  I + Y+RYLE
Sbjct: 362 STPKLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLE 421

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 422 TRFRNAFDL 430


>gi|415943456|ref|ZP_11556065.1| Histidyl-tRNA synthetase [Herbaspirillum frisingense GSF30]
 gi|407758696|gb|EKF68486.1| Histidyl-tRNA synthetase [Herbaspirillum frisingense GSF30]
          Length = 438

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/379 (57%), Positives = 282/379 (74%), Gaps = 4/379 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D +NGDNL+LRPE TA V+R+ +E+NL YDGPKRLWY GPMFRHE
Sbjct: 47   GEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRHE 106

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPDIDAELI+MC RLW +L L +I LELNSIGN  ER K
Sbjct: 107  RPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERNK 166

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y ++HKD      D +  L+ N LR+LD+KN  ++E++  APKLLDYL ++S 
Sbjct: 167  HRADLIAYFEQHKD--LLDTDAQRRLHANPLRILDTKNPTMQEMVNAAPKLLDYLGEESR 224

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QKIL +NNI + IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD LI+ 
Sbjct: 225  AHFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEM 284

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+G+ERL+EL+K  N      +QCD+Y+VH G +A+L++FVL+E LRT 
Sbjct: 285  FGGKPTPACGFAMGVERLLELMKA-NGEQYAPNQCDVYLVHQGDDAQLQSFVLAERLRTA 343

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR-NKYEDPTL 1226
            GL V+L+C  +N   SFK+QMKRA+AS A FA IIGE+E+   T  +K +R    E+   
Sbjct: 344  GLDVVLHCASSNGGGSFKAQMKRADASGAAFAIIIGEDELKAGTATVKHMREGNAEEGRA 403

Query: 1227 KQISISFKDAENYFYKKII 1245
             Q +++F    +Y  ++I+
Sbjct: 404  NQSNMAFDAVVDYIVEQIV 422


>gi|293604545|ref|ZP_06686950.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
 gi|292817126|gb|EFF76202.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
          Length = 454

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/432 (52%), Positives = 311/432 (71%), Gaps = 6/432 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G+  FI IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIAIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R GL   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIAQLLRKSGQQRVLLAVNK 123

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYK-KFFKKKEFTN 176
           +E +    ++ +F+ELG+G P+ ISA +G+GI + +E  L    E P + + F++ E  +
Sbjct: 124 AEGMGLGPAISEFHELGLGQPYPISAAHGDGIVDLIELALKDLAEPPAEAEPFEEGE-GD 182

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
           +     IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  F+ + ++Y LID
Sbjct: 183 LEHDHRIKLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFDRDGRRYTLID 242

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+R+R K FE +EKFSVIKTL++I  +NVV+L+LDA   IS QD +IA F+ E+GR++
Sbjct: 243 TAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAHTEISEQDAHIAGFVLETGRAV 302

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           +V +NKWD +   +++ I+   ++KL FLSFA  + ISA++   I   ++SIN  + ++ 
Sbjct: 303 VVAINKWDGLDGEEKERIEREFQRKLRFLSFARVHTISALRGQGIKPLLKSINSAHAAAF 362

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
             LST ++TR L +AI+   P RK + RPK+RYAHQGG+NPP++VIHGN L  I + Y+R
Sbjct: 363 AKLSTPKLTRELQAAIEQQQPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAIPDSYRR 422

Query: 417 YLEKYFYRTFSL 428
           YLE  F   F L
Sbjct: 423 YLETRFRNAFDL 434


>gi|171463406|ref|YP_001797519.1| GTP-binding protein EngA [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689056|sp|B1XU78.1|DER_POLNS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|171192944|gb|ACB43905.1| small GTP-binding protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 454

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/432 (53%), Positives = 308/432 (71%), Gaps = 10/432 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ +VGR NVGKSTLFNRLT SRDALVA++ GLTRDRHYG+  IG+++FI +DTGGF
Sbjct: 1   MNPVITIVGRSNVGKSTLFNRLTRSRDALVADFSGLTRDRHYGKCRIGERAFICVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GI+ EM KQTKQ + ESDI+IF+VDGR G+  QD++I +FLRK+G+P++L +NK
Sbjct: 61  EPVAKTGIVAEMAKQTKQVVAESDIVIFLVDGRLGMAPQDRVIADFLRKTGRPVILAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILT---IELPYKKFFKKKEFTN 176
           +E + +S+ + DF+ELG+G P  IS+ +G+G++  +++ L    +  P      + E  N
Sbjct: 121 TEGMQASVVTADFHELGLGEPFPISSAHGDGVRGLIDDALDSLGVAEP-----DEDELVN 175

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
             +   +K+A+VG+PNVGKSTLIN L+GE RVI +D PGTTRD+I+  FE N K YIL+D
Sbjct: 176 DPN-RPMKIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTRDAIEVPFERNGKPYILVD 234

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+RRR K FE IEKFSV+KTL++I + NVVIL+LDAQQ+IS QD +IA FI E+GR+L
Sbjct: 235 TAGLRRRGKVFEAIEKFSVVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEAGRAL 294

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           +V VNKWD I    ++  +  I +KL FL FA  + ISA K   +    + ++  Y +++
Sbjct: 295 VVAVNKWDGIDTYVKERARLEIAQKLRFLDFANVHPISAKKGTGLKDLFKDVDAAYAAAM 354

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
             L   R+TR L  AI++  P R  + RPKLRYAHQGG NPPI+VIHG  L  + + YKR
Sbjct: 355 AKLPAPRLTRILQEAIEHQQPKRVGMGRPKLRYAHQGGMNPPIVVIHGTSLSGVTDSYKR 414

Query: 417 YLEKYFYRTFSL 428
           YLE  F   F L
Sbjct: 415 YLEGRFKDVFKL 426


>gi|406975213|gb|EKD98045.1| hypothetical protein ACD_23C00611G0002 [uncultured bacterium]
          Length = 447

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/431 (50%), Positives = 306/431 (70%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R G+  QD  I N+LR+ G+P VLV NK
Sbjct: 61  EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +   I L +FYELG+G+ + +SA +G GI+  ++  L  + LP     ++     + 
Sbjct: 121 AEGMLQGIQLAEFYELGLGDVYPVSAAHGQGIRGLVDLALEPLHLPDPDDTEESVDKGV- 179

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ L+DTA
Sbjct: 180 ----IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR++++ +I+ +L FL FA  +FISA K   +     SI   + ++   
Sbjct: 296 AVNKWDAVDDYQRQLLERSIETRLAFLKFAAMHFISAKKRQGLGPLWVSIAQAHKAATCK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L+ A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + +KR+L
Sbjct: 356 MSTPVLTRVLLEAVQFQAPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAFKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EGRFRKEFDLV 426


>gi|120610115|ref|YP_969793.1| GTP-binding protein EngA [Acidovorax citrulli AAC00-1]
 gi|166224298|sp|A1TM31.1|DER_ACIAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|120588579|gb|ABM32019.1| small GTP-binding protein [Acidovorax citrulli AAC00-1]
          Length = 447

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/431 (50%), Positives = 308/431 (71%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G +GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKLGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R GL  QD  I N+LR+ G+P +LV NK
Sbjct: 61  EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGLSAQDHDIANYLRRLGKPCLLVGNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +   + L +FYELG+G    +SA +G G+++ LE+ L T++L      + ++     
Sbjct: 121 AEGMREGVQLAEFYELGLGEVLPVSAAHGQGVRSMLESALDTLQL-----PEPEDEPEDG 175

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             + I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ LIDTA
Sbjct: 176 EDKPIRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQQFELIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++    R++++ +I+ +L+FL FA  +FISA K   +     SI   + ++   
Sbjct: 296 AVNKWDAVDDYGRQMLERSIETRLSFLKFASLHFISAKKRQGLGPLWTSIAQAHKAATCK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L+ A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLLEAVQFQAPKRSGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EGRFRKEFDLV 426


>gi|241764499|ref|ZP_04762520.1| small GTP-binding protein [Acidovorax delafieldii 2AN]
 gi|241366083|gb|EER60680.1| small GTP-binding protein [Acidovorax delafieldii 2AN]
          Length = 462

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 218/431 (50%), Positives = 303/431 (70%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  +I+IDTGGF
Sbjct: 16  MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 75

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R G+  QD  I N+LR+ G+P VLV NK
Sbjct: 76  EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 135

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +     L +FYELG+G  + +SA +G GI+  ++  L  + LP     +  +     
Sbjct: 136 AEGMLQGGQLAEFYELGLGEVYPVSAAHGQGIRGLVDLALEPLHLP-----EPDDAEQAA 190

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ L+DTA
Sbjct: 191 DKGTIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 250

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 251 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 310

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR++++ +I+ +L FL FA  +FISA K   +     SI   + ++   
Sbjct: 311 AVNKWDAVDEYQRQLLERSIETRLAFLKFAALHFISAKKRQGLGPLWASIVQAHKAATCK 370

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L+ A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 371 MSTPVLTRLLLEAVQFQTPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 430

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 431 EGRFRKEFDLV 441


>gi|311105363|ref|YP_003978216.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8]
 gi|310760052|gb|ADP15501.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8]
          Length = 450

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/429 (51%), Positives = 308/429 (71%), Gaps = 4/429 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G+  FI+IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGEIPFIVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R G+   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQRVLLAVNK 123

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E + +  ++ +F+ELG+G P+ ISA +G+GI + +E  L  +L      ++      H 
Sbjct: 124 AEGMGAGSAISEFHELGLGQPYPISAAHGDGIVDLIELALQ-DLAEPPAEEESPEEGEHD 182

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  FE + ++Y LIDTAG
Sbjct: 183 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAG 241

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE +EKFSVIKTL++I  +NVV+L+LDAQ  IS QD +IA F+ E+GR+++V 
Sbjct: 242 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVLETGRAVVVA 301

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    ++ I+   ++KL FLSFA  + ISA++   +   ++SIN  + ++   L
Sbjct: 302 INKWDGLDGEAKERIEREFQRKLRFLSFARMHTISALRGQGVKPLLKSINAAHAAAFAKL 361

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L +A++   P RK + RPK+RYAHQGG+NPP++VIHGN L  I + Y+RYLE
Sbjct: 362 STPKLTRELQTAVEQQQPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLE 421

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 422 TRFRNAFDL 430


>gi|326316284|ref|YP_004233956.1| ribosome-associated GTPase EngA [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373120|gb|ADX45389.1| ribosome-associated GTPase EngA [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 447

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 218/431 (50%), Positives = 307/431 (71%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G +GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKLGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R GL  QD  I N+LR+ G+P +LV NK
Sbjct: 61  EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGLSAQDHDIANYLRRLGKPCLLVGNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +     L +FYELG+G    +SA +G G+++ LE  L T++L      + ++     
Sbjct: 121 AEGMREGAQLAEFYELGLGEVLPVSAAHGQGVRSLLETALETLQL-----PEPEDEPEDG 175

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             + I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ LIDTA
Sbjct: 176 EDKPIRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQQFELIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++    R++++ +I+ +L+FL FA  +FISA K   +     SI   + S+   
Sbjct: 296 AVNKWDAVDDYGRQMLERSIETRLSFLKFASLHFISAKKRQGLGPLWTSIAQAHKSATCK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L+ A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLLEAVQFQTPKRSGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F+L+
Sbjct: 416 EGRFRKEFNLV 426


>gi|407938384|ref|YP_006854025.1| GTP-binding protein Der [Acidovorax sp. KKS102]
 gi|407896178|gb|AFU45387.1| GTP-binding protein Der [Acidovorax sp. KKS102]
          Length = 447

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/430 (50%), Positives = 303/430 (70%), Gaps = 5/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R G+  QD  I N+LR+ G+P VLV NK
Sbjct: 61  EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +   + L +FYELG+G  + +SA +G GI++ ++    I L      +  +      
Sbjct: 121 AEGMLQGVQLAEFYELGLGEVYPVSAAHGQGIRSLVD----IALELLNLPEPDDSDATLD 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ L+DTAG
Sbjct: 177 KGVIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I  A+VV+LLLDA Q ++ QD +IA +I ESGR++++ 
Sbjct: 237 LRRKGKVFEAIEKFSVVKTLQAIESAHVVLLLLDATQGVTDQDAHIAGYILESGRAVVLA 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD++   QR++++ +I+ +L FL FA  +FISA K   +     SI   + ++   +
Sbjct: 297 VNKWDAVDDYQRQLLERSIETRLAFLKFASLHFISAKKRQGLGPLWTSIAQAHRAATCKM 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L+ A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+LE
Sbjct: 357 STPVLTRLLLEAVQFQSPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFLE 416

Query: 420 KYFYRTFSLI 429
             F + F L+
Sbjct: 417 GRFRKAFDLV 426


>gi|124267181|ref|YP_001021185.1| GTP-binding protein EngA [Methylibium petroleiphilum PM1]
 gi|166225824|sp|A2SHB1.1|DER_METPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|124259956|gb|ABM94950.1| putative GTP-binding protein EngA [Methylibium petroleiphilum PM1]
          Length = 446

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 218/429 (50%), Positives = 305/429 (71%), Gaps = 5/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPVL LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G +G++ FI++DTGGF
Sbjct: 1   MKPVLALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGDGRLGEREFIVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  + GI  EM KQT+QA+ ESD++IF+VD R G+  QD  I  +LR +G+ ++L  NK
Sbjct: 61  EPTAESGIYKEMAKQTRQAVAESDVVIFVVDVRAGVTGQDHDIARYLRTAGKKVLLAANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +   I L +FYELG+G P  +S+ +G GI++    +LT  L    F +  +      
Sbjct: 121 AEGMLEGIQLAEFYELGMGEPLAVSSAHGQGIRS----LLTAALEDFAFDEPDDLALDDP 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ LIDTAG
Sbjct: 177 ERPIRLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERNGQKFELIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I +ANVV+LLLDA Q ++ QD +IA +I +SGR++++ 
Sbjct: 237 LRRKGKVFESIEKFSVVKTLQAIADANVVLLLLDATQGVTDQDAHIAGYILDSGRAVVLA 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD++   QR++++ +I+++L FL FA    ISAIK   +    ++I   + S+   L
Sbjct: 297 VNKWDAVDSYQRELLQRSIEQRLAFLKFAPVLHISAIKRQGLGPVWKAIADAWASATKKL 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T  +TR L+ A++   P R    RPKLRYAHQGG+NPP+IVIHGN L+++ + YKR+LE
Sbjct: 357 ATPVLTRVLLEAVQFQQPKRAGAFRPKLRYAHQGGQNPPVIVIHGNSLEHVTDAYKRFLE 416

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 417 GRFRCHFQL 425


>gi|423016755|ref|ZP_17007476.1| GTP-binding protein Der [Achromobacter xylosoxidans AXX-A]
 gi|338780183|gb|EGP44598.1| GTP-binding protein Der [Achromobacter xylosoxidans AXX-A]
          Length = 451

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 305/429 (71%), Gaps = 3/429 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G   FI IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDIPFIAIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R GL   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIATLLRKSGQQRVLLAVNK 123

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E + +  ++ +F+ELG+G P+ ISA +G+GI + +E  L          ++      H 
Sbjct: 124 AEGMGAGAAIAEFHELGLGQPYPISAAHGDGIVDLIELALQDLAEPPAEEEEAAEEGEHD 183

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  FE + ++Y LIDTAG
Sbjct: 184 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAG 242

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE +EKFSVIKTL++I  +NVV+L+LDAQ  IS QD +IA F+ E+GR++++ 
Sbjct: 243 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVLETGRAVVLA 302

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   +++ I+    +KL FLSFA  + ISA++   I   ++S+N  + ++   L
Sbjct: 303 INKWDGLDGEEKERIEREFMRKLRFLSFARVHTISALRGQGIKPLLKSVNAAHAAAFAKL 362

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L +A++  PP RK + RPK+RYAHQGG+NPP++VIHGN L  + + Y+RYLE
Sbjct: 363 STPKLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDSVPDSYRRYLE 422

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 423 TRFRNAFDL 431


>gi|163856334|ref|YP_001630632.1| GTP-binding protein EngA [Bordetella petrii DSM 12804]
 gi|229710727|sp|A9IK66.1|DER_BORPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|163260062|emb|CAP42363.1| putative GTP-binding protein [Bordetella petrii]
          Length = 451

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/429 (52%), Positives = 308/429 (71%), Gaps = 3/429 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G   FI+IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDTPFIVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R G+   D  I   LRKSGQ  +VL +NK
Sbjct: 64  PVAKTGILREMARQTRQAIAEADVVVFLVDARAGVNAHDHEIAQLLRKSGQQRVVLAVNK 123

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +   + + +F+ELG+G P+ ISA +G+GI + +   L  +L   +     +  ++  
Sbjct: 124 AEGMGVGNATSEFHELGLGTPYPISAAHGDGIVDLIGLALQ-DLVEPEPEPAPDAADLPP 182

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRD+I+  FE + +KY LIDTAG
Sbjct: 183 DHRIKLAIVGRPNVGKSTLINTLLGEERVIAFDLPGTTRDAIEIDFERDGRKYTLIDTAG 242

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K FE +EKFSVIKTL++I  +NVV+L+LDAQ  +S QD +IA F+ E+GR+++V 
Sbjct: 243 LRRRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEVSEQDAHIAGFVLETGRAVVVA 302

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  +QR+ I+   ++KL FLSFA  + ISA+K   I   ++S+   + ++   L
Sbjct: 303 INKWDGLDIDQRERIEREFRRKLRFLSFAPTHTISALKGQGIKPVLKSVVAAHAAAFAKL 362

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L +A++  PP RK + RPK+RYAHQGG+NPP+++IHGN L  I + Y+RYLE
Sbjct: 363 STPKLTRELHAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNALDAIPDSYRRYLE 422

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 423 TRFREAFKL 431


>gi|421482982|ref|ZP_15930561.1| GTP-binding protein Der [Achromobacter piechaudii HLE]
 gi|400198786|gb|EJO31743.1| GTP-binding protein Der [Achromobacter piechaudii HLE]
          Length = 450

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/429 (51%), Positives = 306/429 (71%), Gaps = 4/429 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G+  FI IDTGGFE
Sbjct: 4   KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIAIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
           P  K GI+ EM +QT+QAI E+D+++F+VD R G+   D  I   LRKSGQ  ++L +NK
Sbjct: 64  PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQRVLLAVNK 123

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +    ++ +F+ELG+G P+ ISA +G+GI + +E  L  +L      ++      H 
Sbjct: 124 AEGMGLGPAISEFHELGLGQPYPISAAHGDGIVDLIELALK-DLAEPPVEEEVFEEGDHD 182

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+  F+ + ++Y LIDTAG
Sbjct: 183 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFDRDGRRYTLIDTAG 241

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE +EKFSVIKTL++I  +NVV+L+LDA   IS QD +IA F+ E+GR+++V 
Sbjct: 242 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAHTEISEQDAHIAGFVLETGRAVVVA 301

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   +++ I+   ++KL FLSFA  + ISA++   I   ++SIN  + ++   L
Sbjct: 302 INKWDGLDGEEKERIEREFQRKLRFLSFARMHTISALRGQGIKPLLKSINSAHAAAFAKL 361

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++TR L +AI+   P RK + RPK+RYAHQGG+NPP++VIHGN L  I + Y+RYLE
Sbjct: 362 STPKLTRELQAAIEQQQPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLE 421

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 422 TRFRNAFDL 430


>gi|89901081|ref|YP_523552.1| GTP-binding protein EngA [Rhodoferax ferrireducens T118]
 gi|122479081|sp|Q21W32.1|DER_RHOFD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|89345818|gb|ABD70021.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118]
          Length = 447

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/431 (50%), Positives = 301/431 (69%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG    GK  FI+IDTGGF
Sbjct: 1   MKPVVALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNAKQGKHEFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT QA+ E+D++IF+VD R+G+  QD  I  +LR+ G+P VL  NK
Sbjct: 61  EPDAAGGIFKEMAKQTTQAVAEADVVIFVVDAREGISAQDHEIAKYLRRLGKPCVLAANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
           +E + +   L +F+ELG+G  H ISA +G GI+  ++  L  + L  +    ++    I 
Sbjct: 121 AEGMLAGAQLVEFFELGLGEVHAISAAHGQGIRTLVDLALAPLHLEDQDDADEQREPGI- 179

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ L+DTA
Sbjct: 180 ----IKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERNGQKFELVDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K FE IEKFSV+KTL++I  +NVV+LL+DA Q ++ QD +IA +I E+GR++++
Sbjct: 236 GLRRRGKVFEAIEKFSVVKTLQAIESSNVVLLLIDATQGVTDQDAHIAGYILENGRAVVI 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR+++K +I+ +L FL FA  + ISA K   +     SI   Y ++   
Sbjct: 296 AVNKWDAVDEYQRELVKRSIETRLPFLKFATMHLISATKRQGLGPLWASIAQAYKAANCK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L+ A++   P R  + RPKLRYAHQGG NPP+I+IHGN L+++ + YKR+L
Sbjct: 356 MSTPILTRLLLEAVQFQSPKRSGMFRPKLRYAHQGGMNPPVIIIHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EGRFRKEFDLV 426


>gi|302878616|ref|YP_003847180.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
           ES-2]
 gi|302581405|gb|ADL55416.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
           ES-2]
          Length = 470

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 214/430 (49%), Positives = 317/430 (73%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P LVLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G++ ++++DTGG 
Sbjct: 1   MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGRGRVGERPYLVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  K GIM EM +Q++QA+ E+D+++F+VDGR G   QD +I   LRK+G+PI+L++NK
Sbjct: 61  EPVAKDGIMFEMARQSRQAVDEADVVLFLVDGRAGCTPQDLIIATQLRKTGKPILLLVNK 120

Query: 121 SENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-KEFTNIH 178
           +E +  + ++ +F+ELG+G P+ IS+ +G+ +      +  IE+  + F ++  E   + 
Sbjct: 121 AEGMARARVTAEFFELGLGEPYPISSAHGDNV------VEVIEIALENFPEEIVEEDAVV 174

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             +  K+AIVG+PNVGKSTL+N++LGE RVI +D PGTTRDSI   FE + K+Y +IDTA
Sbjct: 175 EDKPPKLAIVGRPNVGKSTLVNAILGEQRVIAFDQPGTTRDSIYIDFERDGKQYTIIDTA 234

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E IEKFSVIKT+++I +ANVV+L++DA+  I+ QD ++A+F+ ++GR+L++
Sbjct: 235 GVRRRGKVEEAIEKFSVIKTMQAIEDANVVVLVVDARDQITEQDAHVADFVLQAGRALVL 294

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD + ++QR+++K++I++KL+FL FA  ++ISA+  N I++ ++S +  Y +++  
Sbjct: 295 AVNKWDGLDNHQREMVKSDIERKLHFLGFAKRHYISALNGNGISNVLKSADDAYAAAMSK 354

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST ++TRAL+ A +   P +     PK+RYAHQGG NPP+IVIHG+ L  I   Y RYL
Sbjct: 355 MSTPKLTRALLGATEKQAPPKVGRFLPKMRYAHQGGSNPPLIVIHGSGLDNIPASYARYL 414

Query: 419 EKYFYRTFSL 428
           E+ F   F L
Sbjct: 415 ERSFAEIFKL 424


>gi|340787106|ref|YP_004752571.1| histidyl-tRNA synthetase [Collimonas fungivorans Ter331]
 gi|340552373|gb|AEK61748.1| Histidyl-tRNA synthetase [Collimonas fungivorans Ter331]
          Length = 459

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 212/381 (55%), Positives = 279/381 (73%), Gaps = 6/381 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D +NGDNL+LRPE TA V+R+ IE+NL YDGPKRLWYSGPMFRHE
Sbjct: 62   GAVTDIVEKEMYSFTDSMNGDNLTLRPESTAGVVRAAIEHNLTYDGPKRLWYSGPMFRHE 121

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPDIDAELI+MC RLW +L L+++ L+LNSIG+  ER +
Sbjct: 122  RPQRGRYRQFHQVGAEALGFTGPDIDAELIMMCQRLWDDLGLQDVKLQLNSIGDAEERNR 181

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y ++HK+      D +  L+ N LR+LD+KN  +++++  AP+LL YL  +SL
Sbjct: 182  HRADLIAYFEQHKE--LLDADAQRRLHTNPLRILDTKNPAMQDMVNGAPQLLSYLGAESL 239

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QKILN+NNI + IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD L++ 
Sbjct: 240  AHFEGVQKILNHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLVEM 299

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+GIERL+EL++  N      ++CD+Y+VH G+ A+L++FVL+E LR  
Sbjct: 300  FGGKPTPACGFAMGIERLLELMRA-NGEQAVRNECDVYLVHQGEAAQLQSFVLAERLRNA 358

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL V+L+C   N   SFKSQMKRA+AS A +A IIGE+E+ N T  +K LR + +     
Sbjct: 359  GLDVVLHCASANAGGSFKSQMKRADASGAAYAIIIGEDEVANQTATVKTLRAEGDAEKAS 418

Query: 1228 ---QISISFKDAENYFYKKII 1245
               Q  + F    +Y   +I+
Sbjct: 419  AGNQSVVPFDAVSDYLVDQIV 439


>gi|398836193|ref|ZP_10593539.1| histidyl-tRNA synthetase [Herbaspirillum sp. YR522]
 gi|398213197|gb|EJM99791.1| histidyl-tRNA synthetase [Herbaspirillum sp. YR522]
          Length = 462

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/352 (59%), Positives = 270/352 (76%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D +NGD+L+LRPE TA V+R+ +E+NL YDGPKRLWY GPMFRHE
Sbjct: 62   GEVTDIVEKEMYSFTDSMNGDHLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRHE 121

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPDIDAELI+MC RLW +L L+NI LELNSIG+  ER +
Sbjct: 122  RPQRGRYRQFHQVGAEAVGFTGPDIDAELIMMCQRLWDDLGLENIRLELNSIGDAEERNR 181

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y ++H+D      D +  L+ N LR+LD+KN  +++++  APKLLDYL ++SL
Sbjct: 182  HRADLIAYFEQHRD--LLDADAQRRLHANPLRILDTKNPAMQDMVNAAPKLLDYLGEESL 239

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL +NN+ Y IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD L++ 
Sbjct: 240  AHFQGVQRILQHNNVPYSINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLVEM 299

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+G+ERL+EL+K     +   +QCD+Y+VH G++A++++FVL+E LRT 
Sbjct: 300  FGGKPTPACGFAMGVERLLELMKASGEQYA-PNQCDVYLVHQGEDAQMQSFVLAERLRTA 358

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL V+L+C   N   SFK+QMKRA+ S A FA IIGE+EI   T  +K LR 
Sbjct: 359  GLDVVLHCASANGGGSFKAQMKRADGSGAAFAVIIGEDEIKAGTATVKHLRQ 410


>gi|451812243|ref|YP_007448697.1| GTP-binding protein [Candidatus Kinetoplastibacterium galatii
           TCC219]
 gi|451778145|gb|AGF49093.1| GTP-binding protein [Candidatus Kinetoplastibacterium galatii
           TCC219]
          Length = 449

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/429 (54%), Positives = 312/429 (72%), Gaps = 2/429 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+VLVGRPNVGKSTLFNR T S+DALVAN+ GLTRDR YG+G  G   FIIIDTGGFE
Sbjct: 4   KPVIVLVGRPNVGKSTLFNRFTKSKDALVANFSGLTRDRIYGDGTFGNHEFIIIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
           P  K  +  ++  QT QAI+E+DI+IF+VDG+ GL   D  I NFLRK S   I+LV+NK
Sbjct: 64  PSSKDQMYVKVANQTNQAILEADIVIFLVDGKDGLCSTDYDIANFLRKLSITNILLVVNK 123

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE  N S+++ +F+ELG G+P +ISA +G+G+   +E+I   +L +  +       N + 
Sbjct: 124 SEGKNISAMASEFHELGFGSPFLISASHGDGVGLLIESIFESKLNFIDYKNDDVLQNDNL 183

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I+++IVG+PNVGKSTLINS+LGE R+IT+D+PGTTRDSI   F + ++ Y+LIDTAG
Sbjct: 184 DRKIRLSIVGQPNVGKSTLINSMLGEERLITFDSPGTTRDSINVDFGFLDRSYVLIDTAG 243

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR++  + IEKFSV+KTL+SI ++NVV+LLLDA   IS QD  IA++I ESG+++++ 
Sbjct: 244 LRRRSRVSDYIEKFSVVKTLQSIEKSNVVLLLLDANIGISDQDARIASYILESGKAIVIA 303

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWDSI  + R  ++   K+KL+FLSFA  +FISA++  NI   + S+N  YD++   L
Sbjct: 304 INKWDSISVDSRSTVEKEFKRKLHFLSFANMHFISALRKTNIKRLLFSVNDAYDAAFAKL 363

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TRAL++AIK  PP +K +  PKLRYAHQGG NPP+IVIHGN L  I + Y RYLE
Sbjct: 364 PTPKVTRALLNAIKQQPPPKKGIFVPKLRYAHQGGHNPPVIVIHGNCLTNIQDSYIRYLE 423

Query: 420 KYFYRTFSL 428
             F R F L
Sbjct: 424 SCFRREFKL 432


>gi|297538116|ref|YP_003673885.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
 gi|297257463|gb|ADI29308.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
          Length = 484

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/431 (52%), Positives = 303/431 (70%), Gaps = 9/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P +VLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G    + ++++DTGGF
Sbjct: 1   MLPTVVLVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGIGASQPYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP    GI+  M  QT  AI E+D+IIF+VDGRQG   QD  I N LR+S  P++L +NK
Sbjct: 61  EPNTDSGILKAMAVQTLLAIDEADVIIFLVDGRQGATPQDMEIANRLRRSKCPVLLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +N ++ S +F+ELG+G+P  IS+ +G G+K+       I+L  + F + +E   +  
Sbjct: 121 TEGMNKAVVSAEFHELGLGDPLSISSAHGEGVKDI------IDLALESFHEVEEEPELDQ 174

Query: 180 I--EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                 KVAIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI    E N K Y LIDT
Sbjct: 175 TGDRIPKVAIVGRPNVGKSTLVNALLGEERVIAFDEPGTTRDSISIDLEKNGKHYTLIDT 234

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R+R +  E IEKFSVIKT++SI EANVVIL++DAQ+ I+ QD ++A +I ++GR+L+
Sbjct: 235 AGVRKRGRVLEAIEKFSVIKTIQSIEEANVVILVVDAQEGITEQDAHVAAYILDAGRALV 294

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +   +R  +K  I +KL FL FA F++ISA++   +    +S++  + ++  
Sbjct: 295 VAINKWDGLKEEERDWVKREIDRKLMFLDFAEFHYISALRKKGLPELFKSVDIAFKAAFA 354

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L+T ++TR LI A++ H P   K IRPKLRYAHQGG NPPI+VIHGN +  + + Y R+
Sbjct: 355 KLATPQLTRVLIDALQQHQPPISKGIRPKLRYAHQGGSNPPIVVIHGNHVDGVKDAYTRF 414

Query: 418 LEKYFYRTFSL 428
           LEK F RTF L
Sbjct: 415 LEKTFRRTFQL 425


>gi|398805484|ref|ZP_10564457.1| ribosome-associated GTPase EngA [Polaromonas sp. CF318]
 gi|398091520|gb|EJL81961.1| ribosome-associated GTPase EngA [Polaromonas sp. CF318]
          Length = 447

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/431 (51%), Positives = 299/431 (69%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDRHYG G +G   +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRHYGNGKLGPHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R GL  QD  I  +LRK G+P VL  NK
Sbjct: 61  EPDAASGIYKEMAKQTRQAVAEADVVIFVVDARAGLNAQDHDIAKYLRKLGKPTVLTANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
           +E +   + L +F+ELG+G    +SA +G G++  ++  L  + LP       +E     
Sbjct: 121 AEGMTEGVQLSEFFELGLGEVLPVSASHGQGMRTLVDTALAPLNLP-----DPEEEAEPQ 175

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE   +KY LIDTA
Sbjct: 176 DPSVIRLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDTISVPFERAGQKYELIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGRS++V
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIENANVVLLLLDATQGVTDQDAHIAGYILESGRSVVV 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNK D++   QR++++ +I+ +L FL FA  + ISAIK   +    +SI   + S+   
Sbjct: 296 AVNKSDAVDSYQRELLERSIETRLGFLKFASIHAISAIKRQGLGPVWKSIVQAHASANRK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L+ A++   P R  + RPKLRYAHQGG NPPII+IHGN L+++   YKRYL
Sbjct: 356 MSTPVLTRLLLEAVQFQQPQRSGVFRPKLRYAHQGGMNPPIIIIHGNSLEHVTESYKRYL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EGRFRKEFDLV 426


>gi|319941508|ref|ZP_08015835.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B]
 gi|319804982|gb|EFW01821.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B]
          Length = 451

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/431 (48%), Positives = 304/431 (70%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST FNRLT SRDA+VA++PGLTRDR YG+G +G   +I++DTGGF
Sbjct: 1   MLPVIALVGRPNVGKSTFFNRLTRSRDAIVADFPGLTRDRQYGQGRVGPGPYIVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP   +GI+  M  Q + AI E+D+++F+ D R GL  QD  I   LR++ +P+VL++NK
Sbjct: 61  EPVRTEGIVQAMAGQAELAIEEADVVLFLTDARAGLTPQDIRIAQHLRRADRPVVLLVNK 120

Query: 121 SENINSSISLDFYELGIGNPHIISALYGNGIKNFLE---NILTIELPYKKFFKKKEFTNI 177
           +E +  +   +FYELG+G PH++S  +G G+++ L+   + L  + P   F + +   + 
Sbjct: 121 AEGLTETAKAEFYELGLGEPHLVSGAHGQGVRDALDLAFSCLPEDFP---FDEPEAEEDD 177

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                IKV + G+PN GKSTLIN+L+GE RVI +D PGTTRD+IK  FEY+ + Y L+DT
Sbjct: 178 DGPRRIKVTLAGRPNAGKSTLINALVGEERVIAFDMPGTTRDAIKIDFEYDGRPYELVDT 237

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+R++ + FE +EKFSV+KTL++I +ANVVIL++DA++ +S  D +IA ++ E+GR+L+
Sbjct: 238 AGLRKKGRVFEAVEKFSVVKTLQAIEDANVVILVVDAKEGVSEGDAHIAGYVLEAGRALV 297

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V VNKWD +   +R+    ++++KL+FL +A    ISA+K N +N  M +++  + ++  
Sbjct: 298 VAVNKWDLLDSYERERFNLDLERKLHFLRWARMIRISALKRNGLNHLMRAVDEAHAAAYA 357

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TRAL+ A++   P R K  RPK RYAHQGG NPP+IVIHGN L+ IG  Y+RY
Sbjct: 358 KLPTPKLTRALLEAVQRQQPPRAKGGRPKPRYAHQGGSNPPVIVIHGNALEDIGESYRRY 417

Query: 418 LEKYFYRTFSL 428
           LE YF  TF+L
Sbjct: 418 LEGYFRDTFNL 428


>gi|134094492|ref|YP_001099567.1| histidine tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|133738395|emb|CAL61440.1| histidine tRNA synthetase (Histidine--tRNA ligase) (HisRS)
            [Herminiimonas arsenicoxydans]
          Length = 448

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/378 (56%), Positives = 279/378 (73%), Gaps = 7/378 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D +NGD L+LRPE TASV+R+ +E+NL YDGPKRLWYSGPMFRHE
Sbjct: 62   GAVTDIVEKEMYSFTDSMNGDELTLRPECTASVVRAALEHNLTYDGPKRLWYSGPMFRHE 121

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIG EAIGF GPDIDAELI+MC RLW +L L+++ LELNSIGN  ER K
Sbjct: 122  RPQRGRYRQFHQIGAEAIGFSGPDIDAELIMMCQRLWDDLGLQDVRLELNSIGNAEERNK 181

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI+Y ++H  ++    + +  L+ N LR+LD+KN  ++E++  APKLLDYL +DS 
Sbjct: 182  HRADLISYFEQH--AELLDAEAQKRLHSNPLRILDTKNPAMQEMVNAAPKLLDYLGEDSR 239

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QKILN+N I + IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD L++ 
Sbjct: 240  AHFEGVQKILNHNAIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLVEM 299

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+G+ERL+EL+K         +QCD+YIVH G+ A+L+A V++E LR  
Sbjct: 300  FGGKPTPACGFAMGVERLLELMKASGEKFT-PNQCDVYIVHQGEPAQLQASVVAERLRDA 358

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL V+L+C  +    SFKSQMKRA+ S A +A IIGE+EI     ++K++R    D   K
Sbjct: 359  GLDVVLHCAASAGIGSFKSQMKRADNSGAAYAVIIGEDEIAKGAAVVKEMR----DAEGK 414

Query: 1228 QISISFKDAENYFYKKII 1245
            Q  ++F+   +Y   +I+
Sbjct: 415  QSEVAFEGIADYLVDQIV 432


>gi|152980083|ref|YP_001353816.1| histidyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|151280160|gb|ABR88570.1| histidyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 449

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/379 (56%), Positives = 279/379 (73%), Gaps = 7/379 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D +NGD L+LRPE TA V+R+ +E+NL YDGPKRLWY+GPMFRHE
Sbjct: 62   GEVTDIVEKEMYSFTDSMNGDQLTLRPECTAGVVRAALEHNLTYDGPKRLWYAGPMFRHE 121

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIG EAIGF GPDIDAELI+MC RLW +L L+++ LELNSIGN  ER K
Sbjct: 122  RPQRGRYRQFHQIGAEAIGFAGPDIDAELIMMCQRLWDDLGLQDVRLELNSIGNAEERNK 181

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y +K+ D      + +  L+ N LR+LD+KN  +++++  APKLLDYL ++S 
Sbjct: 182  HRADLIAYFEKNAD--LLDTEAQKRLHSNPLRILDTKNPTMQDMVNAAPKLLDYLGEESR 239

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QKIL +N I + IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD L++ 
Sbjct: 240  AHFEGVQKILRHNAIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLVEM 299

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFS-HQCDIYIVHVGKEAELKAFVLSENLRT 1166
            F  K  PA GFA+G+ERL+EL+K       F+ +QCD+YIVH G+EA+L+A V++E LR 
Sbjct: 300  FGGKPTPACGFAMGVERLLELMKA--SGEQFAPNQCDVYIVHQGEEAQLQASVVAERLRD 357

Query: 1167 LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTL 1226
             GL V+L+C       SFKSQMKRA+ S A +A IIGE+EI   T ++K++RN   +   
Sbjct: 358  AGLDVVLHCAAATGIGSFKSQMKRADGSGAAYAVIIGEDEIAQGTAVVKEMRNA--EAAG 415

Query: 1227 KQISISFKDAENYFYKKII 1245
             Q S+ F+   +Y   +I+
Sbjct: 416  NQASVPFEGIADYLVDQIV 434


>gi|347820229|ref|ZP_08873663.1| GTP-binding protein Der [Verminephrobacter aporrectodeae subsp.
           tuberculatae At4]
          Length = 447

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/431 (49%), Positives = 308/431 (71%), Gaps = 9/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ +VGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  G+  +I+IDTGGF
Sbjct: 1   MKPVIAIVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGRYEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM +QT+QA+ E+D++IF+VD R G+  QD+ I N+LR+SG+P VLV NK
Sbjct: 61  EPDASDGIYREMARQTQQAVAEADVVIFVVDARAGVCAQDQDIANYLRRSGRPCVLVANK 120

Query: 121 SEN-INSSISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E  +  +    FYELG+G  + +SA +G G+++ +E  L  + LP      +++ ++ +
Sbjct: 121 AEGMLEGAQPAQFYELGLGTVYPVSASHGQGVRDLVEVALDPLHLP------EQDASDAN 174

Query: 179 SIE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
           + +  I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE + +++ L+DT
Sbjct: 175 ADKGTIRLAVAGRPNVGKSTLINTWLGEERLVVFDMPGTTRDAIVVPFERSGQRFELVDT 234

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RR+ K F  +EKFSV+KTL++I  A+VV+L+LDA Q ++ QD +IA +I ESGRS+ 
Sbjct: 235 AGLRRKGKVFAAVEKFSVVKTLQAIESAHVVLLVLDATQGVTDQDAHIAGYILESGRSVT 294

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + VNKWD++   QR++++ +I+ +L FL FA  +FISA K   +     SI   Y S+  
Sbjct: 295 LAVNKWDAVDAYQRQLLQRSIESRLAFLKFAALHFISAQKRQGLGPLWASIVQAYRSANC 354

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            +ST  +TR L+ A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+
Sbjct: 355 KMSTPVLTRLLLEAVQFQSPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRF 414

Query: 418 LEKYFYRTFSL 428
           LE  F + F L
Sbjct: 415 LEGRFRKAFDL 425


>gi|264679419|ref|YP_003279326.1| small GTP-binding protein [Comamonas testosteroni CNB-2]
 gi|262209932|gb|ACY34030.1| small GTP-binding protein [Comamonas testosteroni CNB-2]
          Length = 446

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/433 (49%), Positives = 309/433 (71%), Gaps = 10/433 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+  +GI  EM KQT+QA+ E+D++IF++D R GL  QD  I N+LR+ G+P +LV NK
Sbjct: 61  EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLGKPTILVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE---NILTIELPYKKFFKKKEFTN 176
           +E +   + L +FYELG+G    +SA +G G+++ ++    +L +  P  + F +++   
Sbjct: 121 AEGMKDGVQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGLLNLPEPEDEVFGEED--- 177

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
               + +++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ LID
Sbjct: 178 ---QKPVRLAVAGRPNAGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQKFELID 234

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+RR+ K FE IEKFSV+KTL++I  ANVV+LL+DA Q ++ QD +IA +I ESGRS+
Sbjct: 235 TAGLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILESGRSV 294

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           ++ +NKWD++   QR++++ +I+ +L+FL FA  +FISA K   +    +SI   + ++ 
Sbjct: 295 VLGINKWDAVDDYQRQMLERSIETRLSFLKFAPLHFISAQKRQGLEPLWKSIIQAHRAAT 354

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
             + T  +TR L+ +I+   P +    RPK+RYAHQGG NPPIIVIHGN L+ + + YKR
Sbjct: 355 CKMPTPVLTRILMESIQFQTPKKVGAYRPKMRYAHQGGMNPPIIVIHGNSLELVTDAYKR 414

Query: 417 YLEKYFYRTFSLI 429
           +LE  F + F+L+
Sbjct: 415 FLEGRFRKEFNLV 427


>gi|438000040|ref|YP_007183773.1| GTP-binding protein [Candidatus Kinetoplastibacterium
           blastocrithidii (ex Strigomonas culicis)]
 gi|451812969|ref|YP_007449422.1| GTP-binding protein [Candidatus Kinetoplastibacterium
           blastocrithidii TCC012E]
 gi|429339274|gb|AFZ83696.1| GTP-binding protein [Candidatus Kinetoplastibacterium
           blastocrithidii (ex Strigomonas culicis)]
 gi|451778938|gb|AGF49818.1| GTP-binding protein [Candidatus Kinetoplastibacterium
           blastocrithidii TCC012E]
          Length = 451

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/431 (53%), Positives = 310/431 (71%), Gaps = 4/431 (0%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KP +VLVGRPNVGKSTLFNR T S+DALVAN+ GLTRDR YG+G  G+ +FI+IDTGGFE
Sbjct: 4   KPAIVLVGRPNVGKSTLFNRFTKSKDALVANFSGLTRDRIYGDGMFGEYNFIVIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
           P  K  +  ++  QT QAI+++DI+IF+VDG+ GL   D  I NFLRK S   + LVINK
Sbjct: 64  PLSKDKMYMKIANQTNQAILDADIVIFLVDGKDGLCNTDYDIANFLRKLSVTNVFLVINK 123

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE  +  +I+ +F+ELG G P +ISA +G+GI   +E+I   +L   K+ K     + + 
Sbjct: 124 SEGRSIDTIASEFHELGFGAPFLISASHGDGIGFLIESIFKSKLYIDKYSKNDNVDSQND 183

Query: 180 IEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
             Y  I+++IVG+PNVGKSTLINS+LGE R+IT+D+PGTTRDSI   F ++ + Y+LIDT
Sbjct: 184 DLYKKIRLSIVGQPNVGKSTLINSILGEERLITFDSPGTTRDSINIDFNFSGRSYVLIDT 243

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR++  + IEKFSVIKT++SI ++NVVIL LDA   IS QD  IA+FI ESG++++
Sbjct: 244 AGLRRRSRVSDCIEKFSVIKTIQSIEKSNVVILTLDANTGISDQDARIASFILESGKAIV 303

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + +NKWDSI  + R  I+   K+KL+FLSFA   FISA++  NI   + S+N  YD++ +
Sbjct: 304 IAINKWDSISLDSRSAIEREFKRKLHFLSFANMYFISALRKTNIKRLLFSVNDAYDAAFV 363

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L T ++TR L+ A K  PP +K +  PKLRYAHQGG+NPP+IVIHGN L  I + Y RY
Sbjct: 364 KLPTPKVTRVLLDATKQQPPPKKGIFVPKLRYAHQGGQNPPVIVIHGNCLTSIQDSYVRY 423

Query: 418 LEKYFYRTFSL 428
           LE +F R F L
Sbjct: 424 LESFFRREFKL 434


>gi|383758605|ref|YP_005437590.1| GTP-binding protein EngA [Rubrivivax gelatinosus IL144]
 gi|381379274|dbj|BAL96091.1| GTP-binding protein EngA [Rubrivivax gelatinosus IL144]
          Length = 447

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/430 (48%), Positives = 301/430 (70%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDA+VA++ GLTRDRHYG+  +G + FI++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRITKSRDAIVADFAGLTRDRHYGDARLGGREFIVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EPE   G++ EM KQTKQA+ E+D+++F+ D R GL  QD  I  FLR   + ++L +NK
Sbjct: 61  EPEKPSGVVAEMAKQTKQAVAEADVVVFVTDLRAGLSAQDHDIARFLRTQQKKVILAVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S  L +F+ELGIG PH +SA +G G+++ LE  L     +    + +E     +
Sbjct: 121 AEGMAESPLLAEFHELGIGEPHPLSASHGQGVRSLLETALE---DFDFGDEDEEGGEPDA 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+IK   E   +++ LIDTAG
Sbjct: 178 DAPIRLAVAGRPNVGKSTLINAWLGEERLVAFDQPGTTRDAIKVSLEREGRRFELIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I +ANVV+L++DA   +S QD +IA ++ ESGR++++ 
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIADANVVVLMVDATVGVSEQDAHIAGYVLESGRAVVLA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD+    QR+ ++ +I+ +L FL FA    ISA K   + +  ++I H + S+ + +
Sbjct: 298 LNKWDATDDYQRQQLQRSIESRLAFLKFAPVLQISAKKRTGLTALWKAILHAHASATVKM 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T  +TR LI A+++  P R+   RPK+RYAHQGG NPP++VIHGN L +I + YKRYLE
Sbjct: 358 PTPVLTRLLIDAVQHQAPRREGAFRPKMRYAHQGGMNPPLVVIHGNSLDHITDAYKRYLE 417

Query: 420 KYFYRTFSLI 429
             F   F L+
Sbjct: 418 GRFREHFKLV 427


>gi|237747710|ref|ZP_04578190.1| histidine tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379072|gb|EEO29163.1| histidine tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 454

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/377 (57%), Positives = 281/377 (74%), Gaps = 5/377 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D LNGD L+LRPE TA V+R+V+E+NL Y+GPKRLWYSGPMFRHE
Sbjct: 65   GAVTDIVEKEMYSFEDSLNGDQLTLRPESTAGVVRAVVEHNLTYNGPKRLWYSGPMFRHE 124

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIG EA+GFPGPDIDAELI++C RLW +L L+NI LE+NSIGN  ER +
Sbjct: 125  RPQRGRYRQFHQIGAEAVGFPGPDIDAELILLCQRLWDDLGLENIRLEINSIGNAGERNR 184

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y ++HK      ED +  LY N LR+LD+KN  +++++  APKLLDYLEK+SL
Sbjct: 185  HRADLIAYFEQHK--GLLDEDAQRRLYSNPLRILDTKNPTMQDMVNAAPKLLDYLEKESL 242

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
            DHF G+Q+IL  NNI Y IN +LVRGMDYYNRTVFEW +++LGSQ ++CGGGRYD L + 
Sbjct: 243  DHFEGVQRILKRNNIPYTINPRLVRGMDYYNRTVFEWISEELGSQGTVCGGGRYDPLFEM 302

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  P+ GFA+G+ERLIEL+K    + N + + D++I H G++A  +AFVL+E+LR  
Sbjct: 303  FGGKPTPSCGFALGMERLIELLKTQG-DVNTTSKADVFIAHQGEDALPEAFVLAESLRNT 361

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL VI+ C   N   SFK+QMKRA+ S A FA +IGE+E+ N    +K LR+  ++   K
Sbjct: 362  GLDVIVYCTAANSGGSFKAQMKRADESGAAFAVLIGEDEVKNGCASVKALRS--DNTADK 419

Query: 1228 QISISFKDAENYFYKKI 1244
            Q+S+ F+   +Y   +I
Sbjct: 420  QLSVPFEKVADYLVDQI 436


>gi|332527857|ref|ZP_08403894.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2]
 gi|332112434|gb|EGJ12227.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2]
          Length = 447

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/430 (48%), Positives = 300/430 (69%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDA+VA++ GLTRDRHYG+  +G + FI++DTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRITKSRDAIVADFAGLTRDRHYGDARLGGREFIVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EPE   G++ EM KQT+QA+ E+D+++F+ D R G+  QD  I  FLR   + ++L +NK
Sbjct: 61  EPEKPSGVVAEMAKQTRQAVAEADVVVFVADLRAGVSAQDHDIARFLRTQQKKVILAVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S  L +F+ELGIG PH +SA +G G+++ LE  L     +    + +E     +
Sbjct: 121 AEGMAESPLLAEFHELGIGEPHPLSASHGQGVRSLLEAALE---DFDFGDEDEEGAEPDA 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+IK   E   +++ LIDTAG
Sbjct: 178 DAPIRLAVAGRPNVGKSTLINAWLGEERLVAFDQPGTTRDAIKVSLEREGRRFELIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I +ANVV+L++DA   +S QD +IA ++ ESGR++++ 
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIADANVVVLMVDATVGVSEQDAHIAGYVLESGRAVVLA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD+    QR+ ++ +I+ +L FL FA    ISA K   + +  ++I H + S+ + +
Sbjct: 298 LNKWDATDEYQRQQLQRSIESRLAFLKFAPLLQISAKKRTGLTALWKAILHAHASATVKM 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T  +TR LI A+++  P R    RPK+RYAHQGG NPP++VIHGN L +I + YKRYLE
Sbjct: 358 PTPVLTRLLIDAVQHQAPRRDGAFRPKMRYAHQGGMNPPLVVIHGNSLDHITDAYKRYLE 417

Query: 420 KYFYRTFSLI 429
             F   F L+
Sbjct: 418 GRFREHFKLV 427


>gi|91788466|ref|YP_549418.1| GTP-binding protein EngA [Polaromonas sp. JS666]
 gi|123355649|sp|Q12AC2.1|DER_POLSJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|91697691|gb|ABE44520.1| Small GTP-binding protein domain [Polaromonas sp. JS666]
          Length = 447

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/430 (49%), Positives = 298/430 (69%), Gaps = 5/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKST+FNRLT +RDA+VA++ GLTRDRHYG G +G   +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTIFNRLTKTRDAIVADFAGLTRDRHYGNGKLGSHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D++IF+VD R G+  QD  I NFLRK G+P VL  NK
Sbjct: 61  EPDAASGIYKEMAKQTRQAVAEADVVIFVVDARAGISAQDHDIANFLRKLGKPTVLTANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +   +   +F+ELG+G    +SA +G G+++ ++    + L         E      
Sbjct: 121 AEGMTEGVQFSEFFELGLGEVLPVSASHGQGMRSLVD----LALAPLHLADPDEEAEPQD 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++A+ G+PNVGKSTLIN+ LGE R++++D PGTTRD+I   FE   +K+ LIDTAG
Sbjct: 177 PSVIRLAVAGRPNVGKSTLINTWLGEERLVSFDLPGTTRDAISVPFERAGQKFELIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++ 
Sbjct: 237 LRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYILESGRAVVLA 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++   QR+ ++ +I+ +L FL FA  + ISAIK   +    +SI   + S+   +
Sbjct: 297 INKWDAVDAYQRETLERSIETRLAFLKFASIHKISAIKRQGLAPVWKSIVQAHASANRKM 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L+ A++   P R  + RPK+RYAHQGG NPPII+IHGN L+++   YKRYLE
Sbjct: 357 STPVLTRLLLEAVQFQQPQRSGMFRPKMRYAHQGGMNPPIIIIHGNSLEHVTEAYKRYLE 416

Query: 420 KYFYRTFSLI 429
             F + F L+
Sbjct: 417 GRFRKEFDLV 426


>gi|451936483|ref|YP_007460337.1| GTP-binding protein [Candidatus Kinetoplastibacterium oncopeltii
           TCC290E]
 gi|451777406|gb|AGF48381.1| GTP-binding protein [Candidatus Kinetoplastibacterium oncopeltii
           TCC290E]
          Length = 450

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/431 (54%), Positives = 316/431 (73%), Gaps = 5/431 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+VLVGRPNVGKSTLFNR T S+DALVAN+ GLTRDR YG+G  G+  FIIIDTGGFE
Sbjct: 4   KPVIVLVGRPNVGKSTLFNRFTKSKDALVANFSGLTRDRIYGDGAFGQHEFIIIDTGGFE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
           P  K  +  ++  QT QAI+ESDI+IF++DG+ GL   D  I NFLRK S + I+LV+NK
Sbjct: 64  PLSKDQMYMKVANQTNQAILESDIVIFLLDGKDGLCNTDYEIANFLRKLSIKNILLVVNK 123

Query: 121 SE--NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNI 177
           SE   I++ IS +F+ELG G+P +ISA +G+G+ + +E+I   +L +  + +      +I
Sbjct: 124 SEGKTIDTVIS-EFHELGFGSPFLISASHGDGVGHLIESIFESKLNFIDQKYDNDVIQDI 182

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
              + I+++IVG+PNVGKSTLINS+LGE R+IT+D+PGTTRDSI   F+++ + YI IDT
Sbjct: 183 DLDKKIRLSIVGQPNVGKSTLINSILGEERLITFDSPGTTRDSINVNFDFSGRSYIFIDT 242

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AGIRRR++  + IEKFSV+KTL SI ++NVV+L+LDA   IS QD  IA++I ESG++++
Sbjct: 243 AGIRRRSRVSDYIEKFSVVKTLHSIEKSNVVMLVLDANIGISDQDARIASYILESGKAIV 302

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + +NKWDSI   +R  I+   K+KL+FLSFA  +FISA++  NIN  + S+N  YD++  
Sbjct: 303 IAINKWDSISIERRSDIEREFKRKLHFLSFANMHFISALRKTNINRLLFSVNDAYDAAFA 362

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            LST ++TR L++A K  PP +  +  PKLRYAHQGG+NPP+IVIHGN L  I + Y RY
Sbjct: 363 KLSTPKVTRVLLNATKQQPPRKNGIFVPKLRYAHQGGQNPPVIVIHGNCLTNIQDSYMRY 422

Query: 418 LEKYFYRTFSL 428
           LE  F + F L
Sbjct: 423 LESCFRKEFKL 433


>gi|121604778|ref|YP_982107.1| GTP-binding protein EngA [Polaromonas naphthalenivorans CJ2]
 gi|166225835|sp|A1VNF8.1|DER_POLNA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|120593747|gb|ABM37186.1| small GTP-binding protein [Polaromonas naphthalenivorans CJ2]
          Length = 445

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/431 (50%), Positives = 299/431 (69%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDRHYG G +G   +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRHYGNGKLGPHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM +QT+QA+ ESD++IF+VD R G+  QD  I N+LRK G+P VL  NK
Sbjct: 61  EPDAVTGIYKEMARQTRQAVAESDVVIFVVDARAGISAQDYDIANYLRKLGKPTVLAANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
           +E +     + +F+ELG+G    +SA +G G++  ++  L  + LP        E T   
Sbjct: 121 AEGLPEGTQVSEFFELGLGEMLAVSASHGQGMRMLVDLALAPLNLP-----DPAEETEQE 175

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE+  +K+ LIDTA
Sbjct: 176 DPAVIKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFEHAGQKFELIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIENANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR++++ +I+ +L FL FA  + ISAIK   +    +SI   + S+   
Sbjct: 296 AVNKWDAVDAYQRELLQRSIETRLGFLKFASIHHISAIKRQGLGPVWKSIIQAHASANRK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L+ A++   P R  + RPKLRYAHQGG NPPI++IHGN L ++   YKRYL
Sbjct: 356 MSTPVLTRLLMEAVQFQQPQRSGVFRPKLRYAHQGGMNPPIVIIHGNSLDHVTESYKRYL 415

Query: 419 EKYFYRTFSLI 429
           E    + F L+
Sbjct: 416 EGRIRKEFDLV 426


>gi|237747707|ref|ZP_04578187.1| ribosomal RNA large subunit methyltransferase N [Oxalobacter
           formigenes OXCC13]
 gi|229379069|gb|EEO29160.1| ribosomal RNA large subunit methyltransferase N [Oxalobacter
           formigenes OXCC13]
          Length = 387

 Score =  453 bits (1165), Expect = e-124,   Method: Composition-based stats.
 Identities = 208/340 (61%), Positives = 263/340 (77%), Gaps = 2/340 (0%)

Query: 534 HELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGT 593
            +L E PFRAKQLQ+WIH+FGVSDF +MTDL+ SLR KL+    +KAP I+ D +S DGT
Sbjct: 21  QKLNEKPFRAKQLQRWIHQFGVSDFAEMTDLAKSLRGKLELCAEVKAPDILKDTVSSDGT 80

Query: 594 RKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQ 652
           RKW+  V   N IETVFIPE  R TLC+STQ GCA+NC+FCSTG+QGF RNLT  EIIGQ
Sbjct: 81  RKWLLDVGAGNAIETVFIPEDTRGTLCVSTQAGCAVNCLFCSTGKQGFSRNLTTAEIIGQ 140

Query: 653 LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           LW+ EF +RR K +  +++ +RQI+N+VMMGMGEPL N+ +++ ALKL+L D+AYGLSRR
Sbjct: 141 LWMAEFAVRRSKGLT-DAKDERQISNVVMMGMGEPLFNFDASVSALKLMLDDNAYGLSRR 199

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V +STSG++PMID+LA+ECPV LAVSLHA N+ LR+ LVP++KK+PLKEL+ AC RY+ 
Sbjct: 200 RVTVSTSGVVPMIDRLAKECPVALAVSLHAPNDTLRDHLVPLNKKHPLKELMAACQRYLD 259

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
           Y+PR  ITFEYCML GINDTD HA EL+ L++      SCK+NLIPFN      L  S +
Sbjct: 260 YAPRDFITFEYCMLDGINDTDEHARELVKLVKHGPNPVSCKLNLIPFNSIAMPGLKRSTD 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +R++ FAKIL+++GI  T+RK RG DI AACG L+GE  D
Sbjct: 320 ARVQSFAKILLDAGIVTTVRKARGEDIEAACGLLAGEIKD 359


>gi|299530502|ref|ZP_07043922.1| GTP-binding protein EngA [Comamonas testosteroni S44]
 gi|298721478|gb|EFI62415.1| GTP-binding protein EngA [Comamonas testosteroni S44]
          Length = 446

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/431 (49%), Positives = 306/431 (70%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+  +GI  EM KQT+QA+ E+D++IF++D R GL  QD  I N+LR+ G+P +LV NK
Sbjct: 61  EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLGKPTILVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
           +E +   + L +FYELG+G    +SA +G G+++ ++  L +  LP  +     E     
Sbjct: 121 AEGMKDGVQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGLLNLPEPEEEVFGEEDQ-- 178

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             + +++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ LIDTA
Sbjct: 179 --KPVRLAVAGRPNAGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQKFELIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LL+DA Q ++ QD +IA +I ESGRS+++
Sbjct: 237 GLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILESGRSVVL 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++   QR++++ +I+ +L+FL FA  +FISA K   +    +SI   + ++   
Sbjct: 297 GINKWDAVDDYQRQMLERSIETRLSFLKFAPLHFISAQKRQGLEPLWKSIIQAHRAATCK 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L+ +I+   P +    RPK+RYAHQGG NPPIIVIHGN L+ + + YKR+L
Sbjct: 357 MPTPVLTRILMESIQFQTPKKVGAYRPKMRYAHQGGMNPPIIVIHGNSLELVTDAYKRFL 416

Query: 419 EKYFYRTFSLI 429
           E  F + F+L+
Sbjct: 417 EGRFRKEFNLV 427


>gi|237745509|ref|ZP_04575989.1| radical SAM enzyme [Oxalobacter formigenes HOxBLS]
 gi|229376860|gb|EEO26951.1| radical SAM enzyme [Oxalobacter formigenes HOxBLS]
          Length = 387

 Score =  452 bits (1163), Expect = e-124,   Method: Composition-based stats.
 Identities = 206/338 (60%), Positives = 261/338 (77%), Gaps = 2/338 (0%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           L E PFRAKQLQ+WIH+ GVSDF  MTDL+ SLR KL+    ++AP ++ D +S DGTRK
Sbjct: 23  LNEKPFRAKQLQRWIHQSGVSDFAGMTDLAKSLRGKLEGCAEVRAPKVLKDHLSADGTRK 82

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V + N IETV+IPE NR TLC+STQ GCA+NC+FCSTG+QGF RNLT  EIIGQLW
Sbjct: 83  WLLDVGEGNAIETVYIPEDNRGTLCVSTQAGCAVNCLFCSTGKQGFSRNLTTDEIIGQLW 142

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +RR KN+  N Q +RQI+N+VMMGMGEPL N+ +++ ALKL+L D+AYGLSRR V
Sbjct: 143 MAEFAIRRSKNMAAN-QSERQISNVVMMGMGEPLFNFDASVNALKLMLDDNAYGLSRRRV 201

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PMID+LA+ECPV LAVSLHA ++ LR+ LVP+++K+PL EL+ AC RY+ Y+
Sbjct: 202 TVSTSGVVPMIDRLAKECPVALAVSLHAPSDKLRDMLVPLNRKHPLSELMAACRRYLEYA 261

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML GINDTD HA EL+ L++      SCK+NLIPFN  P   L  S ++R
Sbjct: 262 PRDFITFEYCMLDGINDTDEHAKELVELVKHGSDPVSCKLNLIPFNSIPMPGLKRSSDAR 321

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I  FAKIL+++GI  T+RK RG DI AACG L+G+  D
Sbjct: 322 ISAFAKILLDAGIVTTVRKTRGEDIEAACGLLAGDVRD 359


>gi|221066038|ref|ZP_03542143.1| small GTP-binding protein [Comamonas testosteroni KF-1]
 gi|220711061|gb|EED66429.1| small GTP-binding protein [Comamonas testosteroni KF-1]
          Length = 446

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/431 (49%), Positives = 305/431 (70%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+  +GI  EM KQT+QA+ E+D++IF++D R GL  QD  I N+LR+ G+P +LV NK
Sbjct: 61  EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLGKPTILVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
           +E +     L +FYELG+G    +SA +G G+++ ++  L +  LP  +     E     
Sbjct: 121 AEGMKDGAQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGLLNLPEPEEEAFGEEDQ-- 178

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             + +++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ LIDTA
Sbjct: 179 --KPVRLAVAGRPNAGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQKFELIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LL+DA Q ++ QD +IA +I ESGRS+++
Sbjct: 237 GLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILESGRSVVL 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++   QR++++ +I+ +L+FL FA  +FISA K   +    +SI   + ++   
Sbjct: 297 AINKWDAVDDYQRQMLERSIETRLSFLKFAPLHFISAQKRQGLEPLWKSIIQAHRAATCK 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L+ +I+   P +    RPK+RYAHQGG NPPIIVIHGN L+ + + YKR+L
Sbjct: 357 MPTPVLTRILMESIQFQTPKKVGAYRPKMRYAHQGGMNPPIIVIHGNSLELVTDAYKRFL 416

Query: 419 EKYFYRTFSLI 429
           E  F + F+L+
Sbjct: 417 EGRFRKEFNLV 427


>gi|418531060|ref|ZP_13096979.1| GTP-binding protein Der [Comamonas testosteroni ATCC 11996]
 gi|371451769|gb|EHN64802.1| GTP-binding protein Der [Comamonas testosteroni ATCC 11996]
          Length = 446

 Score =  451 bits (1160), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/431 (49%), Positives = 305/431 (70%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+  +GI  EM KQT+QA+ E+D++IF++D R GL  QD  I N+LR+ G+P +LV NK
Sbjct: 61  EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLGKPTILVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
           +E +     L +FYELG+G    +SA +G G+++ ++  L +  LP  +     E     
Sbjct: 121 AEGMKDGAQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGLLNLPEPEEETFGEEDQ-- 178

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             + +++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ LIDTA
Sbjct: 179 --KPVRLAVAGRPNAGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQKFELIDTA 236

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LL+DA Q ++ QD +IA +I ESGRS+++
Sbjct: 237 GLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILESGRSVVL 296

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++   QR++++ +I+ +L+FL FA  +FISA K   +    +SI   + ++   
Sbjct: 297 GINKWDAVDDYQRQMLERSIETRLSFLKFAPLHFISAQKRQGLEPLWKSIIQAHRAATCK 356

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L+ +I+   P +    RPK+RYAHQGG NPPIIVIHGN L+ + + YKR+L
Sbjct: 357 MPTPVLTRILMESIQFQTPKKVGAYRPKMRYAHQGGMNPPIIVIHGNSLELVTDAYKRFL 416

Query: 419 EKYFYRTFSLI 429
           E  F + F+L+
Sbjct: 417 EGRFRKEFNLV 427


>gi|445498329|ref|ZP_21465184.1| histidyl-tRNA ligase HisS [Janthinobacterium sp. HH01]
 gi|444788324|gb|ELX09872.1| histidyl-tRNA ligase HisS [Janthinobacterium sp. HH01]
          Length = 450

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/351 (58%), Positives = 268/351 (76%), Gaps = 3/351 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D +NGD L+LRPEGTA  +R+VIE+NL+Y+GPKRLWY+GPMFRHE
Sbjct: 62   GAVTDIVEKEMYSFEDSMNGDKLTLRPEGTAGTVRAVIEHNLVYEGPKRLWYTGPMFRHE 121

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQFYQ G EA+GF GPD+DAE+I++C RLW +L L+NI LELNSIG+  ER +
Sbjct: 122  RPQRGRYRQFYQFGCEAVGFNGPDVDAEMIMLCRRLWDDLGLENIRLELNSIGDAEERAR 181

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + +DLI Y++KH+D      + K  L+ N LR+LD+KN  ++EI+  APKLLDYL ++SL
Sbjct: 182  HRVDLIAYLEKHED--LLDAEAKRRLHSNPLRILDTKNPALQEIVNAAPKLLDYLGEESL 239

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G++KIL++NNI Y IN +LVRG+DYYNRTVFEW TD LGSQ ++C GGRYD LI  
Sbjct: 240  AHFNGVRKILDHNNIPYVINPRLVRGLDYYNRTVFEWVTDALGSQGTVCAGGRYDPLIAS 299

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+GIERL+EL+K+         QCD+Y+VH G+ A+L+AFVL E LR  
Sbjct: 300  FGGKPTPAVGFAMGIERLLELMKEAG-EPEAPGQCDVYLVHQGEAAQLQAFVLGERLRDA 358

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR 1218
            GL V+++    N   SFK+QMK+A+ S A+FA IIGE+E+ N+T  +K +R
Sbjct: 359  GLDVVMHASTANGPGSFKTQMKKADGSGASFAVIIGEDEVANHTASVKAMR 409


>gi|374852463|dbj|BAL55395.1| GTP-binding protein EngA [uncultured beta proteobacterium]
          Length = 455

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/433 (48%), Positives = 295/433 (68%), Gaps = 10/433 (2%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           P LVLVGRPNVGKSTLFNRLT SRDALVAN PGLTRDR YG G +G + ++++DT GF+P
Sbjct: 6   PTLVLVGRPNVGKSTLFNRLTRSRDALVANVPGLTRDRRYGRGKVGGRPYLVVDTAGFDP 65

Query: 63  EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
             K+G+  EM +Q + AI E+D+++F+VDGR GL   D+ I ++LR  G  + +++NK+E
Sbjct: 66  TAKEGLTAEMVRQAELAIREADLVLFVVDGRAGLTPHDEAIADYLRALGVAVRVLVNKTE 125

Query: 123 NINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-FTNIHSI 180
            ++ +I+  +FY LG G P  ISA +G+G++  +  +L    P+ K    KE    + S 
Sbjct: 126 GLDRAIARAEFYALGFGEPLPISASHGDGVREMIHEVLA---PFPKPKPNKEPLAEMQSE 182

Query: 181 EY-----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
           E      I+VA++G+PNVGKSTLIN+LLGENR+I YD PGTTRD+I   FE+N + Y L+
Sbjct: 183 ETGDEDGIRVAVLGRPNVGKSTLINALLGENRLIAYDMPGTTRDAIDVPFEHNGRAYTLV 242

Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
           DTAG+R++ +  + IEKFSVIK L+++ +ANVVIL LDA Q +  QD ++  FI E+GR+
Sbjct: 243 DTAGVRKKGRVTDTIEKFSVIKALQAVEQANVVILTLDATQEVGEQDAHLGGFILETGRA 302

Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
           L++ VNKWD+    QR+ IK  +  KL FLSFA   F+SA     +++ M +++  + ++
Sbjct: 303 LVIAVNKWDAADAYQRQRIKTQLAHKLAFLSFAPVVFLSAKTGKGLDALMRAVDQAFAAA 362

Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
           +  L T ++TR L   +K   P R  L RPK RYAHQGG NPPIIVIHGN L+++   Y 
Sbjct: 363 MKKLPTPQLTRVLQELVKRQAPPRHGLFRPKPRYAHQGGSNPPIIVIHGNALEHLPKSYL 422

Query: 416 RYLEKYFYRTFSL 428
           RYLE  F   F L
Sbjct: 423 RYLEHGFTEAFGL 435


>gi|388567425|ref|ZP_10153859.1| GTP-binding protein Der [Hydrogenophaga sp. PBC]
 gi|388265447|gb|EIK91003.1| GTP-binding protein Der [Hydrogenophaga sp. PBC]
          Length = 446

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/431 (48%), Positives = 298/431 (69%), Gaps = 5/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA+  GLTRDRHYG G +GK+ +I+IDTGGF
Sbjct: 1   MKPVVALVGRPNVGKSTLFNRLTGTRDAIVADLAGLTRDRHYGNGRLGKQEYIVIDTGGF 60

Query: 61  EPEVKKG-IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           EP+  +G I  EM +QT+QA+ ESD+++F+VD R GL  QD  I  +LR+ G+P VLV N
Sbjct: 61  EPDAGEGSIYREMAQQTRQAVAESDVVLFVVDARAGLSAQDHDIATYLRRLGKPCVLVAN 120

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K+E +      ++F+ELG+G    +S  +G G+++ +E +L   LP     +  E     
Sbjct: 121 KAEGMTQGAQFVEFFELGLGEVLPVSGAHGQGVRSMIEAVLE-RLP--GLAEPDEDEAQA 177

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           + + I++ + G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I+  FE N +++ L+DTA
Sbjct: 178 APDTIRLTVAGRPNVGKSTLINAWLGEERLVAFDMPGTTRDAIRVPFERNGQRFELVDTA 237

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ + FE IEKFSVIKTL++I  A+VV+LLLDA Q ++ QD +IA +I ESGR+++V
Sbjct: 238 GLRRKGRVFEAIEKFSVIKTLQAIESAHVVLLLLDATQGVTDQDAHIAGYILESGRAVVV 297

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++   QR+ I+  I+ +L FL FA  + ISA K   +     SI   + S++  
Sbjct: 298 AINKWDAVDSYQREQIERQIETRLAFLKFAALHRISARKRQGLAPLWASIAQAHASAMRK 357

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L  A+    P R    RPK+RYAHQGG NPP+IVIHGN L  + + Y+R+L
Sbjct: 358 MSTPVLTRLLQEAVAFQAPSRGGQARPKMRYAHQGGMNPPVIVIHGNSLDRVPDAYRRFL 417

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 418 EGRFRKAFDLV 428


>gi|296136228|ref|YP_003643470.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12]
 gi|295796350|gb|ADG31140.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12]
          Length = 457

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/437 (48%), Positives = 302/437 (69%), Gaps = 9/437 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P++ LVGRPNVGKSTLFNR+T SRDA+VA+ PGLTRDRHYG   +  +  I++DTGGF
Sbjct: 1   MTPIVSLVGRPNVGKSTLFNRMTRSRDAIVADMPGLTRDRHYGMLRMADRPVIVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP V  GI+H+M +QT+QAI ESD+++F+VD R GL  QD  I   LRK+G+PI+L +NK
Sbjct: 61  EPVVDTGIVHQMARQTRQAIAESDLVVFLVDLRTGLSPQDLHIAAELRKTGKPILLAVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-------ELPYKKFFKKK 172
           +E  +   +L +F+ELG+G P  ISA +G+ + + L+ IL          +P  +   + 
Sbjct: 121 AEGRHGHAALAEFHELGLGEPFSISAAHGDSVPDLLDRILQALPSEPSEGIPETEAASEV 180

Query: 173 EFTNIHSIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKK 231
                   E+ +++AI G+PNVGKSTL+N+L+GE RVI +D PGTTRD+I+  FE + +K
Sbjct: 181 AAETTKPREHSLRLAIAGRPNVGKSTLVNALVGEERVIAFDMPGTTRDAIEVPFERDGRK 240

Query: 232 YILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYE 291
           +ILIDTAG+RR+ K FE +EKFSVIKTL++I +ANVV+LLLDA + +S QD +IA+F  E
Sbjct: 241 FILIDTAGLRRKGKVFEAVEKFSVIKTLQAIEQANVVVLLLDATEGVSDQDAHIASFAVE 300

Query: 292 SGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHV 351
           +GR+L++  NKWD++    R+ +   I+++L F+SFA F+ ISA   + +N  M+S+   
Sbjct: 301 AGRALVLAANKWDAVDTYGRERLMVAIRQRLPFVSFAKFHSISARTGSGLNGLMKSVIAA 360

Query: 352 YDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIG 411
           + ++   L T ++TRA+I A+    P R   +RPKLRYAHQGG NPPII+IHG+ L  + 
Sbjct: 361 HAAAYRKLPTPKLTRAIIEAVAQQQPPRSGPVRPKLRYAHQGGTNPPIIIIHGSALDRVP 420

Query: 412 NDYKRYLEKYFYRTFSL 428
             Y RYLE      F L
Sbjct: 421 ATYTRYLEGQLREKFDL 437


>gi|427401450|ref|ZP_18892522.1| histidine-tRNA ligase [Massilia timonae CCUG 45783]
 gi|425719559|gb|EKU82491.1| histidine-tRNA ligase [Massilia timonae CCUG 45783]
          Length = 447

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/378 (53%), Positives = 280/378 (74%), Gaps = 5/378 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D +NGD L+LRPEGTASV+R+V+E+NL+YDGP+RLWY GPMFRHE
Sbjct: 59   GAVTDIVEKEMYSFEDSMNGDQLTLRPEGTASVVRAVLEHNLVYDGPRRLWYKGPMFRHE 118

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q G EAIGF GPDIDAE+I+M  RLW +L L+N+ LELNSIGN  ER +
Sbjct: 119  RPQRGRYRQFFQFGAEAIGFSGPDIDAEMIMMSRRLWDDLGLQNVRLELNSIGNAEERNR 178

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++KH+D      + K  L+ N LR+LD+KN  ++E++  AP+LLDYL ++SL
Sbjct: 179  HRADLIAYLEKHEDI--LDAEAKRRLHSNPLRILDTKNPAMQEMVNAAPRLLDYLGEESL 236

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G++ +L+ N + Y +N +LVRG+DYYNRTVFEW TD+LG+Q +IC GGRYD LI+ 
Sbjct: 237  AHFNGVKALLDKNAVQYTVNPRLVRGLDYYNRTVFEWVTDELGAQGTICAGGRYDPLIET 296

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GFA+G+ER+IEL+K +       + CD+Y+VH G+EA+L++F+L+E +R  
Sbjct: 297  FGGKPTPAVGFAMGMERIIELMKGLG-EPAEPNVCDVYMVHQGEEAQLQSFILAERIRDA 355

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL V+L+C       SFKSQMK+A+ S A FA IIG++EI NN   +K +R +  +   +
Sbjct: 356  GLDVVLHCATPTGAGSFKSQMKKADGSGAAFAVIIGQDEIANNAAQVKTMRGEVGE--QQ 413

Query: 1228 QISISFKDAENYFYKKII 1245
            Q ++ F++  +Y   +I+
Sbjct: 414  QAAVPFEEVVDYLVDQIV 431


>gi|395763289|ref|ZP_10443958.1| histidyl-tRNA synthetase [Janthinobacterium lividum PAMC 25724]
          Length = 453

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/380 (54%), Positives = 281/380 (73%), Gaps = 5/380 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D +NGDNL+LRPEGTA V+R+V+E+NL+Y+GPKRLWY G MFRHE
Sbjct: 62   GAVTDIVEKEMYSFTDSMNGDNLTLRPEGTAGVVRAVVEHNLVYEGPKRLWYKGQMFRHE 121

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q GVEAIGF GPDIDAE+I+M  RLW +L L+ I LELNSIG+  ER +
Sbjct: 122  RPQKGRYRQFHQFGVEAIGFTGPDIDAEIIMMSRRLWDDLGLEGIRLELNSIGDAAERLR 181

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++ H  S+   E+ K  L+ N LR+LD+KN  +++++  AP+LLDYL ++SL
Sbjct: 182  HRADLIAYLESH--SELLDEEAKRRLHSNPLRILDTKNPAMQDLVNGAPQLLDYLGEESL 239

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF+G+QKILN+NNI + IN +LVRG+DYYNRTVFEW +DKLG+Q ++C GGRYD +++ 
Sbjct: 240  AHFHGVQKILNHNNIPFTINPRLVRGLDYYNRTVFEWVSDKLGAQGTVCAGGRYDGMVEM 299

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  PA GF +G+ERL+ L+K          QCD+Y+VH G++A L+AFVL+E +R  
Sbjct: 300  FGGKSTPAVGFGMGVERLVLLMKDA-AEPEAPAQCDVYLVHQGEQAGLQAFVLAERIRDA 358

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL V+L+C  +N   SFK+QMK+A+AS A FA I+G++EI NN   +K +R    D   +
Sbjct: 359  GLDVVLHCAASNGGGSFKTQMKKADASGAAFAVIMGDDEIANNVATVKAMREA--DAGAQ 416

Query: 1228 QISISFKDAENYFYKKIIKN 1247
            Q ++ F D  +Y   +II +
Sbjct: 417  QNTVPFDDVVDYVVDQIIGD 436


>gi|332530165|ref|ZP_08406113.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624]
 gi|332040357|gb|EGI76735.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624]
          Length = 444

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/430 (49%), Positives = 298/430 (69%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPVL LVGRPNVGKSTLFNRLT +RDA+VA+Y GLTRDRHYG G  G++ FI+IDTGGF
Sbjct: 1   MKPVLALVGRPNVGKSTLFNRLTQTRDAIVADYAGLTRDRHYGNGRQGRREFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  + GI  EM  QT+QA+ E+D +IF+VD R GL  QD  I N+LRK G+P VL  NK
Sbjct: 61  EPTAETGIYKEMANQTRQAVAEADAVIFVVDARAGLSAQDHDIANYLRKLGKPCVLTANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +     L +FYELG+G    +SA +G G++  ++  L  + LP      +++  +  
Sbjct: 121 AEGMQEGAQLAEFYELGLGEVLPVSAAHGQGLRTLVDQALEPLNLP------QEDEEDAV 174

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               I+ A+ G+PNVGKSTLIN+ LGE R+I +D PGTTRD+I+  FE   +K+ LIDTA
Sbjct: 175 EPGVIRFAVAGRPNVGKSTLINTWLGEERLIAFDMPGTTRDAIRVPFERQGQKFELIDTA 234

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ + FE +EKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 235 GLRRKGRVFEAVEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 294

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR+ ++  ++ +L FL FA  + ISA K   +    +S+   + ++   
Sbjct: 295 AVNKWDAVDDYQRQQLQRQLETRLTFLKFANLHLISARKRQGLEPLWKSMLKAHQAANRK 354

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L  A++   P +  + RPKLRYAHQGG NPP+IV+HGN L+++ + YKRYL
Sbjct: 355 MSTPVLTRLLQQAVQFQTPKKSGMYRPKLRYAHQGGMNPPVIVVHGNSLEHVSDAYKRYL 414

Query: 419 EKYFYRTFSL 428
           E +F + F L
Sbjct: 415 EGWFRKEFDL 424


>gi|378823405|ref|ZP_09846045.1| ribosome biogenesis GTPase Der [Sutterella parvirubra YIT 11816]
 gi|378597776|gb|EHY31024.1| ribosome biogenesis GTPase Der [Sutterella parvirubra YIT 11816]
          Length = 487

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/428 (47%), Positives = 303/428 (70%), Gaps = 3/428 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA+YPGLTRDR YG+G +G + ++++DTGGF
Sbjct: 41  MLPVIALVGRPNVGKSTLFNRLTRSRDAIVADYPGLTRDRQYGQGRVGPRPYLVVDTGGF 100

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP   +GI+  M  Q + AI E+D+++F+ D R GL   D  I   LR SG+ + L++NK
Sbjct: 101 EPVKSEGIVQAMAGQAELAIEEADVVLFVCDARAGLTPHDARIAQRLRVSGRKVFLLVNK 160

Query: 121 SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
           +E ++     +FYELG+G P++ISA +G G++  ++  L +E  + +  + +E  +  + 
Sbjct: 161 AEGLSDVAKAEFYELGLGEPYLISAAHGQGVRAVID--LALE-GFPEEEEDEEPEDPDAP 217

Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
           + +KV + G+PN GKSTLIN+L+GE R+I +D PGTTRD+IK  FEYN + Y L+DTAG+
Sbjct: 218 KRLKVTLAGRPNAGKSTLINALIGEERLIAFDMPGTTRDAIKVDFEYNGRPYELVDTAGL 277

Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
           R++ K FE IEKFSV+KTL++I  ANVVIL++DA+  I+  D +IA ++ ESGR+L+V V
Sbjct: 278 RKKGKVFEAIEKFSVVKTLQAIDGANVVILVIDAKNGIADHDAHIAGYVLESGRALVVAV 337

Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
           NKWD +   +R++    +++KL+FL +A    ISA+K N +N  M++++  + ++   + 
Sbjct: 338 NKWDLMSEYEREMFGLELERKLHFLRWARMIRISALKRNGLNHLMKAVDEAHAAAYRKIP 397

Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
           T ++TRAL+ A++   P R +  RPK R+AHQGG NPP+IV+HGN L+ IG  Y+RYLE 
Sbjct: 398 TPKLTRALLEAVERQQPPRARGGRPKPRFAHQGGSNPPVIVVHGNALEDIGESYRRYLES 457

Query: 421 YFYRTFSL 428
           +F   F L
Sbjct: 458 FFREKFDL 465


>gi|237745512|ref|ZP_04575992.1| histidyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376863|gb|EEO26954.1| histidyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 454

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/379 (56%), Positives = 279/379 (73%), Gaps = 7/379 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D LNGD L+LRPE TA V+R+V+E+NL Y+G KRLWY+GPMFRHE
Sbjct: 65   GAVTDIVEKEMYSFEDSLNGDQLTLRPECTAGVVRAVLEHNLTYNGSKRLWYTGPMFRHE 124

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIG EA+GFPGPDIDAELI++C RLW +L L NI LELNSIGN  ER +
Sbjct: 125  RPQRGRYRQFHQIGAEAVGFPGPDIDAELILLCQRLWDDLGLDNIRLELNSIGNAEERNR 184

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y ++HKD     ED +  LY N LR+LD+KN  +++++  APKLLDYL+++SL
Sbjct: 185  HRADLIAYFERHKDV--LDEDAQRRLYSNPLRILDTKNPHMQDMVNAAPKLLDYLDRESL 242

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
            DHF G++KIL  NNI + IN +LVRGMDYYNRTVFEW +++LG+Q ++CGGGRYD L + 
Sbjct: 243  DHFEGVKKILRRNNIPFTINPRLVRGMDYYNRTVFEWISEELGAQGTVCGGGRYDPLFEM 302

Query: 1108 FSNKFVPASGFAIGIERLIELIK-KININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            F  KF P+ GFA+G+ERLIEL+K K  I+   S + D++I H G++A L+A VL+E LR 
Sbjct: 303  FGGKFTPSCGFAMGVERLIELMKAKGGIDS--SKKADVFIAHQGEDALLEATVLAEALRN 360

Query: 1167 LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTL 1226
             GL VIL C   N   SFK+QMKRA+ S A FA +IGE+EI +    +K LR   E+   
Sbjct: 361  TGLDVILYCASLNSGGSFKAQMKRADESGATFAILIGEDEISSGQASVKALR--AENAGN 418

Query: 1227 KQISISFKDAENYFYKKII 1245
             Q S+ F+   +Y   +I+
Sbjct: 419  NQTSVPFEKVADYLVDQIV 437


>gi|389700023|ref|ZP_10185135.1| ribosome-associated GTPase EngA [Leptothrix ochracea L12]
 gi|388591284|gb|EIM31541.1| ribosome-associated GTPase EngA [Leptothrix ochracea L12]
          Length = 449

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/430 (49%), Positives = 295/430 (68%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA+YPGLTRDRHYG+G +   +FI+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTGSRDAIVADYPGLTRDRHYGDGKLAGHAFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+  +GI  EM +QT+QA+ E+D ++F+VD R GL  QD  I  +LR + + +VL  NK
Sbjct: 61  EPDCTEGIFKEMARQTRQAVAEADAVVFVVDLRAGLSAQDHDIAKYLRSANKRVVLAANK 120

Query: 121 SEN-INSSISLDFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
           +E  IN+    +FYELGIG P  IS+ +G GI++ +E  L  +ELP              
Sbjct: 121 AEGMINAPQLAEFYELGIGQPVAISSAHGQGIRSLVELALEGVELPDDDDEASGPIGG-- 178

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           +   I++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I   FE N + + LIDTA
Sbjct: 179 AARPIRLAVAGRPNAGKSTLINAWLGEERLVAFDLPGTTRDTIHVPFERNGQHFELIDTA 238

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I +ANVV+L++DA + +S QD +IA +I E+GR+++V
Sbjct: 239 GLRRKGKVFEAIEKFSVVKTLQAIADANVVLLVVDATEGVSDQDAHIAGYILEAGRAVVV 298

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD+I   QR+ +  +I+ +L FL FA    ISA +   +    ++I   + +++  
Sbjct: 299 AINKWDAIDRYQRERLDRSIELRLPFLKFAPILQISATRRQGLGPLWQAITGAWAAAMAK 358

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L  A++   P R    RPKLRYAHQGG+NPP++VIHGN +  + + YKRYL
Sbjct: 359 MPTPVLTRLLQEAVQFQQPKRVGSTRPKLRYAHQGGQNPPLVVIHGNAVDQVTDVYKRYL 418

Query: 419 EKYFYRTFSL 428
           E      FSL
Sbjct: 419 ESRIRAHFSL 428


>gi|334129946|ref|ZP_08503749.1| GTP-binding protein EngA [Methyloversatilis universalis FAM5]
 gi|333444982|gb|EGK72925.1| GTP-binding protein EngA [Methyloversatilis universalis FAM5]
          Length = 430

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/417 (48%), Positives = 301/417 (72%), Gaps = 9/417 (2%)

Query: 13  VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
           +GKSTLFNRLT +RDALVA++PGLTRDRHYG G +G + F+++DTGGFEP  + GIM EM
Sbjct: 1   MGKSTLFNRLTKTRDALVADFPGLTRDRHYGNGRLGDRPFLVVDTGGFEPTARDGIMVEM 60

Query: 73  TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSI-SLD 131
            +Q +QAI E+D+++FIVDGR GL   D+ I   LR++G+P+VL +NK+E +   I + +
Sbjct: 61  AQQAEQAIAEADVLVFIVDGRAGLTAHDREIAARLRRAGKPLVLAVNKAEGMRREIVAAE 120

Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
           F+ELG+G+ H+IS+ +G G++N +E  L    P+    + ++      +   K+A+ G+P
Sbjct: 121 FHELGLGDIHVISSAHGEGVRNLVEVCLA---PFPLDPEDED-----DLRGPKIAVAGRP 172

Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
           NVGKSTLIN+LLGE RVI +D  GTTRD+I   F+   K+Y LIDTAG+RR+ + FE IE
Sbjct: 173 NVGKSTLINALLGEERVIAFDQAGTTRDAISIPFQRGGKEYTLIDTAGLRRKGRVFESIE 232

Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
           KFSVIKT+++I ++N+ IL+LDA Q +S QD +I  FI ESGR+L++ +NKWD++   +R
Sbjct: 233 KFSVIKTVQAIEQSNICILVLDATQEVSDQDAHIGGFIVESGRALVLVINKWDAVDSYRR 292

Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
           +I K  + +KL+FL FA   +ISA++   ++    +++  Y +++I L T R+TRAL +A
Sbjct: 293 EIFKREVARKLSFLGFARQLYISALEGQGVSGIFGAVDAAYAAAMIKLPTPRLTRALQAA 352

Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSL 428
           ++   P +  L RPK+RYAHQGG NPP+IVIHG  L+++ + Y+R+LE++F  TF L
Sbjct: 353 VEKQAPPKHGLFRPKMRYAHQGGMNPPVIVIHGTALEHVSDSYRRFLERHFLETFKL 409



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 16/164 (9%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           P + + GRPNVGKSTL N L      +  +  G TRD        G K + +IDT G   
Sbjct: 164 PKIAVAGRPNVGKSTLINALLGEERVIAFDQAGTTRDAISIPFQRGGKEYTLIDTAGLR- 222

Query: 63  EVKKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
             +KG + E  +     +T QAI +S+I I ++D  Q + +QD  I  F+ +SG+ +VLV
Sbjct: 223 --RKGRVFESIEKFSVIKTVQAIEQSNICILVLDATQEVSDQDAHIGGFIVESGRALVLV 280

Query: 118 INKSENINS--------SISLDFYELGIGNPHIISALYGNGIKN 153
           INK + ++S         ++     LG      ISAL G G+  
Sbjct: 281 INKWDAVDSYRREIFKREVARKLSFLGFARQLYISALEGQGVSG 324


>gi|422348558|ref|ZP_16429451.1| ribosome-associated GTPase EngA [Sutterella wadsworthensis
           2_1_59BFAA]
 gi|404659192|gb|EKB32047.1| ribosome-associated GTPase EngA [Sutterella wadsworthensis
           2_1_59BFAA]
          Length = 448

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/428 (48%), Positives = 305/428 (71%), Gaps = 3/428 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA++PGLTRDR YG+G +G+  +I++DTGGF
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRSRDAIVADFPGLTRDRQYGQGRVGRMPYIVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP   +GI+  M  Q + AI E+D++IF+ D R GL   D+ I   LR+SG+ ++LV+NK
Sbjct: 61  EPVKSEGIVKAMASQAELAIDEADVVIFVCDARSGLTPHDQRIAVRLRQSGRKVILVVNK 120

Query: 121 SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
           +E +++  + +FYELG G P +ISA +G G+   ++  L +E  +++  + +E  +  + 
Sbjct: 121 AEGLSAVAAAEFYELGFGEPWLISAAHGQGVNAVMD--LALE-GFEEEPEDEEDDDPDAP 177

Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
           + +KV + G+PN GKSTLIN+L+GE R+I +D PGTTRD+I+  FEYN + Y L+DTAG+
Sbjct: 178 KRLKVTLAGRPNAGKSTLINALIGEERLIAFDMPGTTRDAIRVDFEYNGRPYELVDTAGL 237

Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
           R++ K FE IEKFSV+KTL++I +ANVVIL++DA+  I+  D +IA ++ +SGR+L+V V
Sbjct: 238 RKKGKVFEAIEKFSVVKTLQAIEDANVVILVVDAKNGIADHDAHIAGYVLDSGRALVVAV 297

Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
           NKWD +    R++    +++KL+FL +A    ISA+K N +N  M++++  + ++   + 
Sbjct: 298 NKWDLMSDYDREMFNLELERKLHFLRWARMIRISALKRNGLNHLMKAVDEAHAAAYRKIP 357

Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
           T ++TRAL  A++   P R +  RPK R+AHQGG NPP+IVIHGN L+ IG  Y+RYLE 
Sbjct: 358 TPKLTRALFEAVERQQPPRARGGRPKPRFAHQGGSNPPVIVIHGNALEDIGESYRRYLEG 417

Query: 421 YFYRTFSL 428
           +F   F L
Sbjct: 418 FFREKFDL 425


>gi|222110307|ref|YP_002552571.1| GTP-binding protein enga [Acidovorax ebreus TPSY]
 gi|254783151|sp|B9MFY0.1|DER_ACIET RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|221729751|gb|ACM32571.1| Miro domain protein [Acidovorax ebreus TPSY]
          Length = 447

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/431 (51%), Positives = 303/431 (70%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM +QT+QA+ E+D+++F+VD R GL  QD  I N+LR+ G+P VL  NK
Sbjct: 61  EPDASSGIYREMARQTQQAVAEADVVVFVVDVRGGLSAQDHDIANYLRRLGKPCVLAGNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +  S+ L +FYELG+G  H +SA +G G+++ ++  L  + LP  +        N+ 
Sbjct: 121 AEGMQDSMHLAEFYELGLGEVHPVSAAHGQGVRSLVDLALKPLALPEIEEEDAAAEKNV- 179

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ LIDTA
Sbjct: 180 ----IRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQKFELIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVI 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++    R+ ++ +I+ +L+FL FA  +FISA K   I     SI   Y S+   
Sbjct: 296 AVNKWDAVDDYGRQQLERSIETRLSFLKFAPLHFISAKKRQGIGPLWSSIIQAYKSANRK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L  A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLQEAVQFQSPKRSGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EARFRKEFDLV 426


>gi|94311043|ref|YP_584253.1| histidyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93354895|gb|ABF08984.1| histidyl tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 447

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/383 (53%), Positives = 274/383 (71%), Gaps = 3/383 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL+LRPEGTA+ +RS IE+NL+YDGPKRLWY GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDSLNGENLTLRPEGTAAAVRSTIEHNLLYDGPKRLWYIGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPD+DAE+I+MC RLW +L L N+ LELNS+G  +ER  
Sbjct: 124  RPQRGRYRQFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTNVRLELNSLGQAHERAA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y++  +D     ED K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++SL
Sbjct: 184  HREQLIKYLEGFQDI--LDEDSKRRLYTNPLRVLDTKNPALQEMAANAPKLIDFLGEESL 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI++
Sbjct: 242  AHFEGVQRILLANNIPFKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIQQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+GIER+IELI++ N+  + +  CD+Y+VH G+ A  +A + +E LR  
Sbjct: 302  MGGKPAPACGWAMGIERIIELIREENLVPD-TQGCDVYMVHQGELANQQAMIAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL V+L+   +    SFKSQMKRA+AS A+FA IIG++EI   T+ +K LR        +
Sbjct: 361  GLDVVLHATPDGKSGSFKSQMKRADASGASFAVIIGDDEIAAGTVQVKQLRGGNVAEGGQ 420

Query: 1228 QISISFKDAENYFYKKIIKNINN 1250
            Q ++  +    +    ++  I  
Sbjct: 421  QTTVPAEQVVEFIIDAMVDEIEG 443


>gi|386333815|ref|YP_006029986.1| histidyl-tRNA synthetase [Ralstonia solanacearum Po82]
 gi|334196265|gb|AEG69450.1| histidyl-tRNA synthetase (histidine--tRNA ligase) [Ralstonia
            solanacearum Po82]
          Length = 440

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/353 (57%), Positives = 261/353 (73%), Gaps = 3/353 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 124  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL + SL
Sbjct: 184  HRADLIKYLEDFQDI--LDEDGKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGEASL 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 242  KHFEGVQALLKANNIPYTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +       CD+YIVH G +A+++A V +E LR  
Sbjct: 302  IGGKPAPACGWAMGVERIIELLREEKLAPE-PQGCDVYIVHQGDQAQVQALVAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 1220
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      IK LR +
Sbjct: 361  GLDVILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQIKPLRGE 413


>gi|337279536|ref|YP_004619008.1| GTP-binding protein engA [Ramlibacter tataouinensis TTB310]
 gi|334730613|gb|AEG92989.1| candidate GTP-binding protein engA [Ramlibacter tataouinensis
           TTB310]
          Length = 462

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/431 (50%), Positives = 300/431 (69%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG    G+  FI+IDTGGF
Sbjct: 18  MKPVMALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNARQGRHEFIVIDTGGF 77

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP  + GI  EM KQT+QA+ E+D+++F+VD R GL  QD  I  +LRK G+P VL  NK
Sbjct: 78  EPTAEGGIYMEMAKQTRQAVAEADVVVFVVDARGGLSAQDHDIAGYLRKLGKPTVLAANK 137

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
           +E +     L +FYELG+G    +SA +G GI++ ++  L + +LP     +  E     
Sbjct: 138 AEGMQEGAQLAEFYELGLGEVLPVSAAHGQGIRSLVDTALGLLQLP-----EPGEEGEAG 192

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE   +K+ LIDTA
Sbjct: 193 PDGTIKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERAGQKFELIDTA 252

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ + FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 253 GLRRKGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 312

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR+ ++  I+ +L FL FA  +FISA K   +    +SI   + S+ + 
Sbjct: 313 AVNKWDAVDDYQREQLQRQIESRLAFLKFAKLHFISARKRQGLGPVWQSIAEAHRSATVK 372

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L+ A++   P R  + RPKLRYAHQGG NPP+IV+HGN L+++ + YKR+L
Sbjct: 373 MPTPVLTRLLLEAVQFQSPKRAGMFRPKLRYAHQGGMNPPVIVVHGNSLEHVTDAYKRFL 432

Query: 419 EKYFYRTFSLI 429
           E  F + F+L+
Sbjct: 433 EGRFRKEFNLV 443


>gi|83747948|ref|ZP_00944979.1| Histidyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83725366|gb|EAP72513.1| Histidyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 440

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/353 (57%), Positives = 261/353 (73%), Gaps = 3/353 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 124  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL + SL
Sbjct: 184  HRADLIKYLEDFQDI--LDEDSKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGEASL 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 242  KHFEGVQALLKANNIPYTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +       CD+YIVH G +A+++A V +E LR  
Sbjct: 302  IGGKPAPACGWAMGVERIIELLREEKLAPE-PQGCDVYIVHQGDQAQVQALVAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 1220
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      IK LR +
Sbjct: 361  GLDVILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQIKPLRGE 413


>gi|390568823|ref|ZP_10249115.1| histidyl-tRNA ligase [Burkholderia terrae BS001]
 gi|420254107|ref|ZP_14757128.1| histidyl-tRNA synthetase [Burkholderia sp. BT03]
 gi|389939172|gb|EIN01009.1| histidyl-tRNA ligase [Burkholderia terrae BS001]
 gi|398050086|gb|EJL42474.1| histidyl-tRNA synthetase [Burkholderia sp. BT03]
          Length = 447

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/384 (53%), Positives = 276/384 (71%), Gaps = 4/384 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER K
Sbjct: 124  RPQRGRYRQFHQVGVEALGFAGPDTDAEIILMCQRLWDDLGLTGIKLEINSLGLAEERAK 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y++KH D     ED K  L+ N LRVLD+KN  ++E+  NAPKL+D+L ++S 
Sbjct: 184  HRVELIAYLEKHLDV--LDEDAKRRLHTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 242  AHFEGLQRILKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ N+    +  CD+Y+ H G  A  +AF+++E LR  
Sbjct: 302  LGGKPTAACGWAMGIERILELLKEENLVPE-AEGCDVYVAHQGDAAREQAFIVAERLRDT 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE-DPTL 1226
            GL VIL+C  +    SFKSQMKRA+AS A FA I+GE+EI N T  +K LR+  + D   
Sbjct: 361  GLDVILHCSPDGQASSFKSQMKRADASGAAFAVILGEDEIANGTAGVKALRDTSQSDGKS 420

Query: 1227 KQISISFKDAENYFYKKIIKNINN 1250
            +Q ++  +D   Y    ++ +  +
Sbjct: 421  EQQTVPLEDLTEYLINAMVASTED 444


>gi|451823100|ref|YP_007459374.1| GTP-binding protein [Candidatus Kinetoplastibacterium desouzaii
           TCC079E]
 gi|451775900|gb|AGF46941.1| GTP-binding protein [Candidatus Kinetoplastibacterium desouzaii
           TCC079E]
          Length = 444

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/429 (51%), Positives = 304/429 (70%), Gaps = 7/429 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KPV+ LVGR NVGKSTLFNRLT +R+A+VA++PGLTRDRHYGE  I    FI+IDTGG E
Sbjct: 4   KPVISLVGRTNVGKSTLFNRLTKTRNAIVADFPGLTRDRHYGEANIAFHKFIVIDTGGLE 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
           P  K     ++  QT QAI+ESD+IIF++D R G+  QD  I   LRK + + I + INK
Sbjct: 64  PNSKDVFSAKIASQTNQAILESDVIIFLLDARSGICNQDYEIAKMLRKIANKRIFMAINK 123

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           SE ++      DFY++G+G P++IS+ +G+GI N  E+ L+ + P +        +N   
Sbjct: 124 SEGMSLEKFDSDFYKMGLGKPYLISSSHGDGIYNLFESALS-DFPTENDLDIDPPSN--- 179

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++AIVGKPNVGKSTLINS++GE R+I +D PGTT+DSI   F   ++ Y+L+DTAG
Sbjct: 180 -NNIRLAIVGKPNVGKSTLINSIIGEERLIAFDMPGTTKDSIDVDFSIKDRNYVLVDTAG 238

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IR+++K F+ +EKFSV+KTL+SI  +NVV+L+LDA  +IS QD +IA FI ESG+++++ 
Sbjct: 239 IRKKSKVFDYVEKFSVVKTLQSIESSNVVLLVLDACSDISEQDAHIAGFILESGKAIVIA 298

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NK DS+   + K I+   ++K++FLSFA  + ISAIK  NI S  +SIN  Y+S+  +L
Sbjct: 299 INKCDSVKPEEMKNIERTFQRKMHFLSFARMHMISAIKKYNIRSLFDSINEAYESTFANL 358

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST +I R L  A++  PP +K ++RPK+RYAHQGG+NPP+IVIHGN L  I   Y R+LE
Sbjct: 359 STPKINRLLKLAVEKQPPPKKNILRPKMRYAHQGGQNPPVIVIHGNSLDLIPKSYVRFLE 418

Query: 420 KYFYRTFSL 428
            +F + FSL
Sbjct: 419 SFFRKEFSL 427


>gi|207743443|ref|YP_002259835.1| histidyl-trna synthetase (histidine--trna ligase)(hisrs) protein
            [Ralstonia solanacearum IPO1609]
 gi|421897153|ref|ZP_16327521.1| histidyl-trna synthetase (histidine--trna ligase)(hisrs) protein
            [Ralstonia solanacearum MolK2]
 gi|206588359|emb|CAQ35322.1| histidyl-trna synthetase (histidine--trna ligase)(hisrs) protein
            [Ralstonia solanacearum MolK2]
 gi|206594840|emb|CAQ61767.1| histidyl-trna synthetase (histidine--trna ligase)(hisrs) protein
            [Ralstonia solanacearum IPO1609]
          Length = 423

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/353 (57%), Positives = 261/353 (73%), Gaps = 3/353 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 47   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 106

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 107  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 166

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL + SL
Sbjct: 167  HRADLIKYLEDFQDI--LDEDSKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGEASL 224

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 225  KHFEGVQALLKANNIPYTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 284

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +       CD+YIVH G +A+++A V +E LR  
Sbjct: 285  IGGKPAPACGWAMGVERIIELLREEKLAPE-PQGCDVYIVHQGDQAQVQALVAAERLRDA 343

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 1220
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      IK LR +
Sbjct: 344  GLDVILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQIKPLRGE 396


>gi|344166994|emb|CCA79185.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [blood disease
            bacterium R229]
          Length = 440

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 262/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER+ 
Sbjct: 124  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEEREA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + +DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL  +S 
Sbjct: 184  HRVDLIKYLEGFQDI--LDEDGKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGDESR 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 242  KHFEGVQTLLKANNIPYTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++ ++       CD+YIVH G +A+++A V +E LR  
Sbjct: 302  IGGKPAPACGWAMGVERIIELLREEHLAPE-PQGCDVYIVHQGDQAQMQALVAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      +K LR 
Sbjct: 361  GLDVILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQVKPLRG 412


>gi|300691805|ref|YP_003752800.1| histidyl-tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299078865|emb|CBJ51526.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia
            solanacearum PSI07]
          Length = 432

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 263/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 56   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER+ 
Sbjct: 116  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEEREA 175

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + +DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+  +APKL+DYL  +S 
Sbjct: 176  HRVDLIKYLEGFQDI--LDEDGKRRLYTNPLRVLDTKNPALQEMAASAPKLIDYLGDESR 233

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 234  KHFEGVQTLLKANNIPYTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 293

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++ ++       CD+YIVH G +A+++A V +E LR  
Sbjct: 294  IGGKPAPACGWAMGVERIIELLREEHLAPE-PQGCDVYIVHQGDQAQMQALVAAERLRDA 352

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      +K LR 
Sbjct: 353  GLDVILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQVKPLRG 404


>gi|300704413|ref|YP_003746016.1| histidyl-tRNA synthetase (histidine--tRNA ligase) [Ralstonia
            solanacearum CFBP2957]
 gi|299072077|emb|CBJ43409.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia
            solanacearum CFBP2957]
          Length = 432

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/353 (57%), Positives = 262/353 (74%), Gaps = 3/353 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L+LRPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 56   GEVTDIVEKEMYSFTDSLNGEHLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 116  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 175

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL + SL
Sbjct: 176  HRADLIKYLEGFQDI--LDEDGKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGEASL 233

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 234  KHFEGVQALLKANNIPYTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 293

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +       CD+YIVH G +A+++A V +E LR  
Sbjct: 294  IGGKPAPACGWAMGVERIIELLREERLAPE-PQGCDVYIVHQGDQAQVQALVAAERLRDA 352

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 1220
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      IK LR +
Sbjct: 353  GLDVILHCSPEGSNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQIKPLRGE 405


>gi|121593586|ref|YP_985482.1| GTP-binding protein EngA [Acidovorax sp. JS42]
 gi|166224299|sp|A1W581.1|DER_ACISJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|120605666|gb|ABM41406.1| small GTP-binding protein [Acidovorax sp. JS42]
          Length = 447

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/431 (51%), Positives = 302/431 (70%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM +QT+QA+ E+D+++F+VD R GL  QD  I N+LR+ G+P VL  NK
Sbjct: 61  EPDASSGIYREMARQTQQAVAEADVVVFVVDVRGGLSAQDHDIANYLRRLGKPCVLAGNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +  S+ L +FYELG+G  H +SA +G G+++ ++  L  + LP  +        N+ 
Sbjct: 121 AEGMQDSMHLAEFYELGLGEVHPVSAAHGQGVRSLVDLALKPLALPEIEEEDAAAEKNV- 179

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +K+ LIDTA
Sbjct: 180 ----IRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQKFELIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVI 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++    R+ ++ +I+  L+FL FA  +FISA K   I     SI   Y S+   
Sbjct: 296 AVNKWDAVDDYGRQQLERSIETCLSFLKFAPLHFISAKKRQGIGPLWSSIIQAYKSANRK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L  A++   P R  + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLQEAVQFQSPKRSGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EARFRKEFDLV 426


>gi|430806173|ref|ZP_19433288.1| histidyl-tRNA ligase [Cupriavidus sp. HMR-1]
 gi|429501553|gb|EKZ99884.1| histidyl-tRNA ligase [Cupriavidus sp. HMR-1]
          Length = 447

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/383 (53%), Positives = 273/383 (71%), Gaps = 3/383 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL+LRPEGTA+ +RS IE+NL+YDGPKRLWY GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDSLNGENLTLRPEGTAAAVRSTIEHNLLYDGPKRLWYIGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPD+DAE+I+MC RLW +L L N+ LELNS+G  +ER  
Sbjct: 124  RPQRGRYRQFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTNVRLELNSLGQAHERAA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y++  +D     ED K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++SL
Sbjct: 184  HREQLIKYLEGFQDI--LDEDSKRRLYTNPLRVLDTKNPALQEMAANAPKLIDFLGEESL 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+++IL  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI++
Sbjct: 242  AHFEGVKRILLANNIPFKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIQQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+GIER+IELI++ N+  +    CD+Y+VH G+ A  +A + +E LR  
Sbjct: 302  MGGKPAPACGWAMGIERIIELIREENLVPDV-QGCDVYMVHQGELANQQAMIAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL V+L+   +    SFKSQMKRA+AS A+FA IIG++EI   T+ +K LR        +
Sbjct: 361  GLDVVLHATPDGKSGSFKSQMKRADASGASFAVIIGDDEIAAGTVQVKQLRGGNAAEGGQ 420

Query: 1228 QISISFKDAENYFYKKIIKNINN 1250
            Q ++  +    +    ++  I  
Sbjct: 421  QTTVPAEQVVEFIIDAMVDEIEG 443


>gi|299067267|emb|CBJ38464.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia
            solanacearum CMR15]
          Length = 440

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/358 (56%), Positives = 263/358 (73%), Gaps = 6/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L++RPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 124  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL  +S 
Sbjct: 184  HRADLIKYLEGFQDI--LDEDSKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGDESR 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 242  RHFEGVQALLKANNIPYMINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++ N+       CD+YIVH G +A+++A V +E LR  
Sbjct: 302  IGGKPAPACGWAMGVERIIELLREENLAPE-PQGCDVYIVHQGDQAQVQALVAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPT 1225
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      +K LR    DP+
Sbjct: 361  GLDVILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQLKPLRG---DPS 415


>gi|421888530|ref|ZP_16319621.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia
            solanacearum K60-1]
 gi|378966150|emb|CCF96369.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia
            solanacearum K60-1]
          Length = 440

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/353 (57%), Positives = 262/353 (74%), Gaps = 3/353 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L+LRPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDSLNGEHLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 124  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL + SL
Sbjct: 184  HRADLIKYLEGFQDI--LDEDGKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGEVSL 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 242  KHFEGVQALLKANNIPYTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +       CD+YIVH G +A+++A V +E LR  
Sbjct: 302  IGGKPAPACGWAMGVERIIELLREEKLAPE-PQGCDVYIVHQGDQAQVQALVAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 1220
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      IK LR +
Sbjct: 361  GLDVILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQIKPLRGE 413


>gi|395003895|ref|ZP_10387992.1| ribosome-associated GTPase EngA [Acidovorax sp. CF316]
 gi|394318179|gb|EJE54639.1| ribosome-associated GTPase EngA [Acidovorax sp. CF316]
          Length = 447

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/431 (50%), Positives = 307/431 (71%), Gaps = 7/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D+++F+VD R G+  QD  I N+LR+  +P VLV NK
Sbjct: 61  EPDASTGIYREMAKQTQQAVAEADVVVFVVDARAGVSAQDHDIANYLRRLSKPCVLVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +   + L +FYELG+G    +SA +G GI++ +E  L  + LP      + + ++  
Sbjct: 121 AEGMVEGVQLAEFYELGLGEVFPVSAAHGQGIRSLVEIALEPLNLPDPD---EADASDDK 177

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           S+  IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE N +++ L+DTA
Sbjct: 178 SV--IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR +++ +I+ +L+FL FA  +FISA K   +     SI   + ++   
Sbjct: 296 AVNKWDAVDEYQRTLLERSIESRLSFLKFASMHFISAKKRQGLGPLWTSIVQAHKAATCK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +TR L+ A++   P R  + RPKLRYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MSTPVLTRLLLEAVQFQAPKRSGMFRPKLRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415

Query: 419 EKYFYRTFSLI 429
           E  F + F L+
Sbjct: 416 EGRFRKEFDLV 426


>gi|312796090|ref|YP_004029012.1| radical SAM protein [Burkholderia rhizoxinica HKI 454]
 gi|312167865|emb|CBW74868.1| Radical SAM family enzyme [Burkholderia rhizoxinica HKI 454]
          Length = 391

 Score =  435 bits (1119), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/338 (59%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRA+QLQ+WIH  GVSDF+ MTDL+ SLR KLK    I+ P ++ D  S DGTRK
Sbjct: 36  LGEKPFRARQLQRWIHHGGVSDFDAMTDLAKSLRDKLKTRASIRHPAVLQDHTSADGTRK 95

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V + N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL VGEIIGQLW
Sbjct: 96  WLLDVGEGNAVETVYIPEQGRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLGVGEIIGQLW 155

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF LR  +     + G+R ITN+VMMGMGEPLLN+ + + A++L+L DHAYGLSRR V
Sbjct: 156 MAEFALRAARGGL--APGERVITNVVMMGMGEPLLNFDAVVPAMRLMLDDHAYGLSRRRV 213

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++PMID+LA E PV LAVSLHA N+ LR++LVP+++KYPL EL+ AC+RY+  +
Sbjct: 214 TLSTSGVVPMIDRLAAELPVALAVSLHAPNDALRDELVPLNRKYPLAELMAACNRYLRVA 273

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND D HA +L++L R       CK NLIPFN FP S L+ S   R
Sbjct: 274 PRDFITFEYCMLDGVNDRDEHARQLLALTRD----VPCKFNLIPFNPFPESGLLRSHPER 329

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           IK FA+IL+++G+  T+R+ RG+DI+AACGQL+GE  D
Sbjct: 330 IKQFAQILIDAGVVTTVRRTRGDDIDAACGQLAGEVRD 367


>gi|451811518|ref|YP_007447973.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii
           TCC036E]
 gi|451776676|gb|AGF47675.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii
           TCC036E]
          Length = 445

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/432 (50%), Positives = 311/432 (71%), Gaps = 12/432 (2%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KP++ +VGR NVGKSTLFNRLT +++ALVA++PGLTRDRHYGE +    +FI+IDTGG +
Sbjct: 4   KPIVSIVGRANVGKSTLFNRLTKTKNALVADFPGLTRDRHYGEAHFASYNFIVIDTGGLD 63

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
              K     ++  QT QAI+ESDIIIF++DGR G+  QD  I   LRK S + I+L INK
Sbjct: 64  VHSKDQFSLKIASQTNQAILESDIIIFLLDGRSGICSQDYEIAKLLRKFSDKRILLAINK 123

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTN--- 176
           SE +N S+ S +FYELG+G P++IS+ +G+GI + +E+ L+        F + +      
Sbjct: 124 SEGMNLSNFSNEFYELGLGKPYLISSSHGDGIYHLIEDSLS-------GFSQTDVDENSI 176

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
           + S   IK+AI+GKPNVGKSTLINS LGE R+I +D PGTT+DSI   F+++++KYIL+D
Sbjct: 177 VESNSSIKLAIIGKPNVGKSTLINSFLGEERLIAFDMPGTTKDSINVDFKFDDRKYILVD 236

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+RR+++    IEKFSVIKT+++I  ++VV+L++DA + IS QD ++A FI ESG+++
Sbjct: 237 TAGMRRKSRVINYIEKFSVIKTIQAIESSDVVLLVIDANEEISDQDAHMAGFILESGKAI 296

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           ++  NK D+I   + K ++ + ++K++FLSFA  + ISA+K  +IN    SIN  YDSS 
Sbjct: 297 VIAFNKCDTIEKEKLKNLEKSFRRKMHFLSFAKLHMISALKKYHINDIFYSINEAYDSSF 356

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
            +LST ++ + L  AI   PP +K +IRPK+RYAHQGG+NPPIIVIHGN L++I + Y R
Sbjct: 357 ANLSTPKLNKLLKIAITKQPPPKKNIIRPKMRYAHQGGQNPPIIVIHGNSLEHISSSYIR 416

Query: 417 YLEKYFYRTFSL 428
           YLE +F R  SL
Sbjct: 417 YLESFFRRELSL 428


>gi|344171687|emb|CCA84307.1| histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia syzygii
            R24]
          Length = 440

 Score =  435 bits (1118), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 261/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER+ 
Sbjct: 124  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEEREA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL  +S 
Sbjct: 184  HRADLIKYLEGFQDI--LDEDGKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGDESR 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L  NNI Y IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 242  KHFEGVQTLLKANNIPYTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++ ++       CD+YIVH G +A+++A V +E LR  
Sbjct: 302  IGGKPAPACGWAMGVERIIELLREEHLAPE-PQGCDVYIVHQGDQAQMQALVAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C     + SFKSQ KRA+AS A++A IIG++E+      +K LR 
Sbjct: 361  GLDVILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQVKPLRG 412


>gi|413962504|ref|ZP_11401731.1| radical SAM enzyme, Cfr family protein [Burkholderia sp. SJ98]
 gi|413928336|gb|EKS67624.1| radical SAM enzyme, Cfr family protein [Burkholderia sp. SJ98]
          Length = 380

 Score =  434 bits (1117), Expect = e-118,   Method: Composition-based stats.
 Identities = 200/340 (58%), Positives = 258/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++G  DF+ MTDL+ SLR+KLK    +  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYGAEDFDGMTDLAKSLREKLKGRANMAMPDIISDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLVDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRREKNIKINSQGK--RQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR+    ++   GK  R +TN+VMMGMGEP+LNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRKSLGREVGGPGKGERVVTNVVMMGMGEPMLNYDAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+LA + PV LAVSLHA N+ LR+ LVP++KKYPL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLAADLPVALAVSLHAPNDPLRDMLVPLNKKYPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S L  SKN
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLTRSKN 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVQD 359


>gi|377820992|ref|YP_004977363.1| radical SAM enzyme, Cfr family [Burkholderia sp. YI23]
 gi|357935827|gb|AET89386.1| radical SAM enzyme, Cfr family [Burkholderia sp. YI23]
          Length = 380

 Score =  434 bits (1117), Expect = e-118,   Method: Composition-based stats.
 Identities = 200/340 (58%), Positives = 258/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++G  DF+ MTDL+ SLR+KLK    +  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYGADDFDGMTDLAKSLREKLKGRANMAMPGIISDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRREKNIKINSQGK--RQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LRR    ++   GK  R +TN+VMMGMGEP+LNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRRSLGREVGGPGKGERVVTNVVMMGMGEPMLNYDAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+LA + PV LAVSLHA N+ LR+ LVP++KKYPL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLAADLPVALAVSLHAPNDPLRDMLVPLNKKYPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+ND++ HA EL+++ R       CK NLIPFN FP S L  SKN
Sbjct: 264 VAPRDFITFEYCMLDGVNDSEAHARELLAVTRD----VPCKFNLIPFNPFPESGLTRSKN 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVQD 359


>gi|330817169|ref|YP_004360874.1| hypothetical protein bgla_1g22910 [Burkholderia gladioli BSR3]
 gi|327369562|gb|AEA60918.1| hypothetical protein bgla_1g22910 [Burkholderia gladioli BSR3]
          Length = 378

 Score =  434 bits (1116), Expect = e-118,   Method: Composition-based stats.
 Identities = 200/340 (58%), Positives = 256/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAMIGMPEIASDHVSSDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EI+GQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N +  R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRESLGRAPGPNGKADRVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KKYPL+EL+ AC RY+T
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKYPLRELMAACQRYLT 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDTD HA EL+++ R       CK NLIPFN FP S L+ SKN
Sbjct: 264 VAPRDFITFEYCMLDGVNDTDAHARELLAVTRD----VPCKFNLIPFNPFPESGLLRSKN 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            RIK F++IL+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 ERIKQFSQILIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|393778487|ref|ZP_10366760.1| histidyl-tRNA synthetase (histidine--tRNA ligase) [Ralstonia sp. PBA]
 gi|392714525|gb|EIZ02126.1| histidyl-tRNA synthetase (histidine--tRNA ligase) [Ralstonia sp. PBA]
          Length = 436

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/351 (56%), Positives = 261/351 (74%), Gaps = 3/351 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 64   GEVTDIVEKEMYSFTDALNGEHLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPDIDAE+I+MC RLW +L L  + L+LNS+G   ER  
Sbjct: 124  RPQRGRYRQFHQVGAEALGFAGPDIDAEIIMMCQRLWDDLGLVGVQLQLNSLGQSEERAA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++K +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL  +SL
Sbjct: 184  HRRDLIAYLEKFQDI--LDEDGKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGSESL 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q++L  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD L++ 
Sbjct: 242  RHFERVQELLKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTIAGGGRYDPLVEM 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++ N+  + +  CD+Y+VH G+EA+ +A +  E LR  
Sbjct: 302  IGGKPAPACGWAMGVERIIELMREENLVPD-APGCDVYVVHQGEEAQREAMLAGERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR 1218
            GL VIL+C  +    SFKSQMKRA+AS A +A IIG +EI    + +KDLR
Sbjct: 361  GLDVILHCTADGTSGSFKSQMKRADASGAAYAVIIGGDEIAAGVVQVKDLR 411


>gi|307729250|ref|YP_003906474.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583785|gb|ADN57183.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 446

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 262/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAQERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y++KH D     ED K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++S 
Sbjct: 183  HRVELIAYLEKHMDV--LDEDAKRRLYTNPLRVLDTKNPALQEVAQNAPKLIDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRILKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +       CD+Y+VH G  A  +AF+++E LR  
Sbjct: 301  LGGKATAACGWAMGIERILELLKEEQLVPE-DEGCDVYVVHQGDAAREQAFIIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C  +    SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+
Sbjct: 360  GLDVILHCSADGQSASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD 411


>gi|323526577|ref|YP_004228730.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383579|gb|ADX55670.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 446

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/352 (56%), Positives = 261/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y++KH D     ED K  LY N LRVLD+KN  ++E+  NAPKL+D+L  +S 
Sbjct: 183  HRVELIAYLEKHMDV--LDEDAKRRLYTNPLRVLDTKNPALQEVAQNAPKLIDFLGAESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRILKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +       CD+Y+VH G  A  +AF+++E LR  
Sbjct: 301  LGGKATAACGWAMGIERILELLKEEQLVPE-DEGCDVYVVHQGDAAREQAFIIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C  +    SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+
Sbjct: 360  GLDVILHCSADGQSASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD 411


>gi|407714024|ref|YP_006834589.1| histidyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
 gi|407236208|gb|AFT86407.1| histidyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
          Length = 446

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/352 (56%), Positives = 261/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y++KH D     ED K  LY N LRVLD+KN  ++E+  NAPKL+D+L  +S 
Sbjct: 183  HRVELIAYLEKHMDV--LDEDAKRRLYTNPLRVLDTKNPALQEVAQNAPKLIDFLGTESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRILKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +       CD+Y+VH G  A  +AF+++E LR  
Sbjct: 301  LGGKATAACGWAMGIERILELLKEEQLVPE-DEGCDVYVVHQGDAAREQAFIIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C  +    SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+
Sbjct: 360  GLDVILHCSADGQSASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD 411


>gi|186476177|ref|YP_001857647.1| histidyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|229558662|sp|B2JIV0.1|SYH_BURP8 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|184192636|gb|ACC70601.1| histidyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 446

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/384 (52%), Positives = 275/384 (71%), Gaps = 4/384 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER K
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDTDAEIILMCQRLWDDLGLTGIKLEINSLGLAEERAK 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y++KH D     ED K  LY N LRVLD+KN  ++ +  NAPKL+D+L  +S 
Sbjct: 183  HRVELIAYLEKHMDV--LDEDAKRRLYTNPLRVLDTKNPALQAVAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRILKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ N+    +  CD+Y+ H G+ A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEENLVPE-NEGCDVYVAHQGEAARDQAFIVAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE-DPTL 1226
            GL VIL+C  +    SFKSQMKRA+AS A FA I+GE+EI N T  +K LR+  + +   
Sbjct: 360  GLDVILHCSPDGQASSFKSQMKRADASGAAFAVILGEDEIANGTAGVKALRDSSQSNGKS 419

Query: 1227 KQISISFKDAENYFYKKIIKNINN 1250
            +Q ++  +D   Y    ++ +  +
Sbjct: 420  EQQTVPLEDLTEYLINAMVASTED 443


>gi|187928153|ref|YP_001898640.1| histidyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|187725043|gb|ACD26208.1| histidyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 450

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/358 (56%), Positives = 263/358 (73%), Gaps = 6/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG+ L++RPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 74   GEVTDIVEKEMYTFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 133

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 134  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 193

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++++   APKLLDYL  +S 
Sbjct: 194  HRADLIKYLEGFQDV--LDEDGKRRLYTNPLRVLDTKNPALQDMAAGAPKLLDYLGDESR 251

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QK+L  NNI + IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 252  AHFEGVQKLLKANNIPFIINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 311

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +    +  CD+YIVH G EA+++A + +E LR  
Sbjct: 312  IGGKPAPACGWAMGVERIIELLREEKLEPE-AQGCDVYIVHQGDEAQVQALIAAERLRDA 370

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPT 1225
            GL VIL+      + SFKSQ KRA+AS A++A IIG++E+      IK LR    DPT
Sbjct: 371  GLDVILHASPEGRNGSFKSQFKRADASGASYAVIIGDDEVTQGVAQIKPLRG---DPT 425


>gi|91784206|ref|YP_559412.1| histidyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123168325|sp|Q13X29.1|SYH_BURXL RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|91688160|gb|ABE31360.1| histidyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 446

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/356 (56%), Positives = 265/356 (74%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LELNS+G  +ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLELNSLGLAHERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y++KH D     E+ K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++S 
Sbjct: 183  HRVELIAYLEKHMDV--LDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRILKANNIPFTINQRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +       CD+Y+VH G+ A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEQLVPE-DEGCDVYVVHQGEAAREQAFIIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VIL+C  +    SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+   D
Sbjct: 360  GLDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRDTNAD 415


>gi|404378012|ref|ZP_10983112.1| histidyl-tRNA synthetase [Ralstonia sp. 5_2_56FAA]
 gi|348615943|gb|EGY65451.1| histidyl-tRNA synthetase [Ralstonia sp. 5_2_56FAA]
          Length = 440

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/358 (55%), Positives = 263/358 (73%), Gaps = 6/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG+ L++RPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 64   GEVTDIVEKEMYTFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 123

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 124  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 183

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++++   APKL+DYL  +S 
Sbjct: 184  HRADLIKYLEGFQDI--LDEDGKRRLYSNPLRVLDTKNPALQDMAAGAPKLIDYLGDESR 241

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QK+L  NNI + IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 242  AHFEGVQKLLKANNIPFTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 301

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +    +  CD+YIVH G EA+++A + +E LR  
Sbjct: 302  IGGKPAPACGWAMGVERIIELLREEKLEPE-AQGCDVYIVHQGDEAQVQALIAAERLRDA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPT 1225
            GL VIL+      + SFKSQ KRA+AS A++A IIG++E+      IK LR    DPT
Sbjct: 361  GLDVILHASPEGRNGSFKSQFKRADASGASYAVIIGDDEVTQGVAQIKPLRG---DPT 415


>gi|309782320|ref|ZP_07677047.1| histidine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308918938|gb|EFP64608.1| histidine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 450

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/358 (55%), Positives = 263/358 (73%), Gaps = 6/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG+ L++RPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 74   GEVTDIVEKEMYTFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 133

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 134  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 193

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++++   APKL+DYL  +S 
Sbjct: 194  HRADLIKYLEGFQDI--LDEDGKRRLYSNPLRVLDTKNPALQDMAAGAPKLIDYLGDESR 251

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QK+L  NNI + IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 252  AHFEGVQKLLKANNIPFTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 311

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +    +  CD+YIVH G EA+++A + +E LR  
Sbjct: 312  IGGKPAPACGWAMGVERIIELLREEKLEPE-AQGCDVYIVHQGDEAQVQALIAAERLRDA 370

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPT 1225
            GL VIL+      + SFKSQ KRA+AS A++A IIG++E+      IK LR    DPT
Sbjct: 371  GLDVILHASPEGRNGSFKSQFKRADASGASYAVIIGDDEVTQGVAQIKPLRG---DPT 425


>gi|238027069|ref|YP_002911300.1| radical SAM superfamily protein [Burkholderia glumae BGR1]
 gi|237876263|gb|ACR28596.1| radical SAM superfamily protein [Burkholderia glumae BGR1]
          Length = 378

 Score =  432 bits (1110), Expect = e-118,   Method: Composition-based stats.
 Identities = 200/340 (58%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGMPEIASDHVSSDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EI+GQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRESLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR+ LVP++KKYPL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDMLVPLNKKYPLRELMAACQRYLA 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML GINDTD HA EL+++ R       CK NLIPFN FP S L+ SKN
Sbjct: 264 VAPRDFITFEYCMLDGINDTDAHARELLAVTRD----VPCKFNLIPFNPFPESGLLRSKN 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            RIK F++IL+ +G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 ERIKQFSQILIEAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|209521126|ref|ZP_03269854.1| histidyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209498436|gb|EDZ98563.1| histidyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 446

 Score =  431 bits (1109), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/352 (56%), Positives = 262/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYVGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLSGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y++KH D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L ++S 
Sbjct: 183  HRVELIAYLEKHMDV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +       CD+Y+VH G  A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEQLVPE-DEGCDVYVVHQGDAAREQAFIIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C  +    SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+
Sbjct: 360  GLDVILHCSADGQSASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD 411


>gi|374366360|ref|ZP_09624441.1| histidyl-tRNA synthetase [Cupriavidus basilensis OR16]
 gi|373102144|gb|EHP43184.1| histidyl-tRNA synthetase [Cupriavidus basilensis OR16]
          Length = 462

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 196/352 (55%), Positives = 260/352 (73%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 83   GEVTDIVEKEMYSFTDALNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHE 142

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPD+DAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 143  RPQRGRYRQFHQLGAEALGFAGPDVDAEIIMMCQRLWDDLGLVGVRLELNSLGQAEERAA 202

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +LI Y++  +D     ED +  LY N LRVLD+KN  ++E+  NAPKL+D+L  +SL
Sbjct: 203  HREELIKYLEGFQDI--LDEDSQRRLYTNPLRVLDTKNPALQEMASNAPKLIDFLGAESL 260

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI +
Sbjct: 261  AHFDGVQRLLKANNIPFKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIAR 320

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+GIER+IEL+++ N+    +   D+Y+VH G+ A  +A +++E LR  
Sbjct: 321  MGGKAAPACGWAMGIERIIELLREENLVPQ-AEGADVYLVHQGEAAGQQAMMIAERLRDA 379

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL V+L+   +    SFKSQMKRA+ S A +A IIGE+E++  T  +KDLR 
Sbjct: 380  GLDVLLHATPDGKSGSFKSQMKRADGSGAAYAVIIGEDEVVAGTAQVKDLRQ 431


>gi|295676902|ref|YP_003605426.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436745|gb|ADG15915.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 446

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/352 (56%), Positives = 262/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+IIMC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIIMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y++KH D     ED K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++S 
Sbjct: 183  HRVELIAYLEKHMDV--LDEDAKRRLYTNPLRVLDTKNPALQEVAQNAPKLIDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +       CD+Y+VH G  A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEQLVPE-DEGCDVYVVHQGDAAREQAFIIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C  +    SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+
Sbjct: 360  GLDVILHCSADGQSASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD 411


>gi|241662756|ref|YP_002981116.1| histidyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864783|gb|ACS62444.1| histidyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 450

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 199/358 (55%), Positives = 263/358 (73%), Gaps = 6/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG+ L++RPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 74   GEVTDIVEKEMYTFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 133

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G  +ER  
Sbjct: 134  RPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQADERAA 193

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++++   APKL+DYL  +S 
Sbjct: 194  HRADLIKYLEGFQDI--LDEDGKRRLYSNPLRVLDTKNPALQDMAAGAPKLIDYLGDESR 251

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QK+L  NNI + IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 252  AHFEGVQKLLKANNIPFTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 311

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++  +    +  CD+YIVH G EA+++A + +E LR  
Sbjct: 312  IGGKPAPACGWAMGVERIIELLREEKLEPE-AQGCDVYIVHQGDEAQVQALIAAERLRDA 370

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPT 1225
            GL VIL+      + SFKSQ KRA+AS A++A IIG++E+      IK LR    DP 
Sbjct: 371  GLDVILHASPEGRNGSFKSQFKRADASGASYAVIIGDDEVTQGVAQIKPLRG---DPA 425


>gi|17545935|ref|NP_519337.1| histidyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|32130128|sp|Q8Y029.1|SYH_RALSO RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|17428230|emb|CAD14918.1| probable histidyl-trna synthetase (histidine--trna ligase)(hisrs)
            protein [Ralstonia solanacearum GMI1000]
          Length = 432

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 199/352 (56%), Positives = 261/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L++RPEGTA+ +R+VIE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 56   GEVTDIVEKEMYSFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            +PQ GRYRQF+Q+GVEA+GF GPDIDAE+I+MC RLW +L L  + LELNS+G   ER  
Sbjct: 116  KPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAA 175

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI Y++  +D     ED K  LY N LRVLD+KN  ++E+   APKL+DYL ++S 
Sbjct: 176  HRADLIKYLEGFQDI--LDEDSKRRLYTNPLRVLDTKNPALQEMAAGAPKLIDYLGEESC 233

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QK+L  NNI + IN +LVRG+DYYN TVFEWTTDKLG+Q ++ GGGRYD LI++
Sbjct: 234  AHFEGVQKLLKANNIPFTINPRLVRGLDYYNLTVFEWTTDKLGAQGTVAGGGRYDPLIEQ 293

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER+IEL+++ N+        D+YIVH G EA+++A V +E LR  
Sbjct: 294  IGGKPAPACGWAMGVERIIELLREENLAPE-PQGSDVYIVHQGDEAQVQALVAAERLRDA 352

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+      + SFKSQ KRA+AS A +A IIG++E+ +  + IK LR 
Sbjct: 353  GLDVILHASAEGRNGSFKSQFKRADASGAAYAVIIGDDEVASGVVQIKPLRG 404


>gi|377820989|ref|YP_004977360.1| histidyl-tRNA synthetase [Burkholderia sp. YI23]
 gi|357935824|gb|AET89383.1| histidyl-tRNA synthetase [Burkholderia sp. YI23]
          Length = 449

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/387 (51%), Positives = 274/387 (70%), Gaps = 7/387 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L++RPE TA+V+R+ IE+NL+YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRATIEHNLLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LELNS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDTDAEIIMMCQRLWDDLGLTGIRLELNSLGQAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +LI Y++KH DS    E+ K  LY N LRVLD+KN  ++EI  NAPKL+D+L + S 
Sbjct: 183  HRKELIAYLEKHVDS--LDEEAKRRLYTNPLRVLDTKNPAMQEIAQNAPKLVDFLGETSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGGRYD LI++
Sbjct: 241  KHFEGVQRLLKANNIPFTINPRLVRGLDYYNLTVFEWITDKLGAQGTVAGGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+G+ER++EL+K+  +    +   D+Y+VH G++A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGVERILELLKEEQLAPE-AEGTDVYVVHQGEKAAEQAFIVAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR----NKYED 1223
            GL VIL+C  +    SFKSQMK+A+AS A FA ++GE+E+   T+ +K LR       E 
Sbjct: 360  GLDVILHCSPDGASASFKSQMKKADASGAAFAVVLGEDELAQGTIGVKPLRRAGGETSEG 419

Query: 1224 PTLKQISISFKDAENYFYKKIIKNINN 1250
               +Q+++  +D   Y    ++    +
Sbjct: 420  QKNEQVNVPAEDLTEYLINAMVATAED 446


>gi|374366356|ref|ZP_09624437.1| hypothetical protein OR16_10354 [Cupriavidus basilensis OR16]
 gi|373102140|gb|EHP43180.1| hypothetical protein OR16_10354 [Cupriavidus basilensis OR16]
          Length = 384

 Score =  429 bits (1104), Expect = e-117,   Method: Composition-based stats.
 Identities = 197/339 (58%), Positives = 258/339 (76%), Gaps = 7/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRA+QLQ+WIH+FG S F+ M+DL+ SLR+KL     I++P +++D +S DGTR
Sbjct: 21  ELGEKPFRARQLQRWIHQFGASRFDAMSDLAKSLREKLATRAEIRSPAVITDNLSADGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   + +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQL
Sbjct: 81  KWLLDVGAGDAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF +R +  +   ++  R I+N+VMMGMGEPLLNY   + A++L+L DHAYGLSRR 
Sbjct: 141 WMAEFAMRAQ--LGRGAKDDRVISNVVMMGMGEPLLNYDQVVPAMRLMLDDHAYGLSRRR 198

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+D+LA++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ +
Sbjct: 199 VTLSTSGVVPMMDRLAKDLPVALAVSLHASNDPLRDMLVPLNKKYPLAELMAACRRYLEF 258

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA EL+ L+        CK NLIPFN FP S L  S N 
Sbjct: 259 APRDFITFEYCMLDGVNDGVEHARELLKLVAD----VPCKFNLIPFNPFPESGLKRSNNE 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +I+ FA++LM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 315 QIRRFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|254252255|ref|ZP_04945573.1| hypothetical protein BDAG_01475 [Burkholderia dolosa AUO158]
 gi|124894864|gb|EAY68744.1| hypothetical protein BDAG_01475 [Burkholderia dolosa AUO158]
          Length = 379

 Score =  429 bits (1104), Expect = e-117,   Method: Composition-based stats.
 Identities = 201/340 (59%), Positives = 256/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  SDF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNASDFDGMTDLAKSLREKLKGRASIAMPDIVSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE  R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEGTRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYNAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA+IL+++GI  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQILIDAGIVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|295676905|ref|YP_003605429.1| radical SAM enzyme, Cfr family [Burkholderia sp. CCGE1002]
 gi|295436748|gb|ADG15918.1| radical SAM enzyme, Cfr family [Burkholderia sp. CCGE1002]
          Length = 383

 Score =  429 bits (1103), Expect = e-117,   Method: Composition-based stats.
 Identities = 199/344 (57%), Positives = 259/344 (75%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P ++SD IS DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATITMPGVVSDHISSDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLIDVGNGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRREKN------IKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR  +       I  + +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASRGDAGGRAIGGDGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHASN+ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADVPVALAVSLHASNDALRDVLVPLNKKYPLRELMAACE 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++ HA EL+++ R       CK NLIPFN FP S LI
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAHARELLAVTRD----VPCKFNLIPFNPFPESGLI 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK  +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKPEQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|329912294|ref|ZP_08275724.1| Histidyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327545656|gb|EGF30811.1| Histidyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 464

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/379 (54%), Positives = 267/379 (70%), Gaps = 5/379 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D +NGD L+LRPE TA V+R+ IE+NL Y+GPKRLWY+GPMFRHE
Sbjct: 72   GTVTDIVEKEMYSFADSMNGDLLTLRPEATAGVVRAAIEHNLTYEGPKRLWYTGPMFRHE 131

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPDIDAEL+++C RLW +L L NI LELNSIGN  ER  
Sbjct: 132  RPQRGRYRQFHQVGAEALGFSGPDIDAELMMLCQRLWDDLGLDNIRLELNSIGNAEERNS 191

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + IDLI Y ++H +     E+ K  L+ N LR+LD+KN  ++ ++  AP+LL YL ++S 
Sbjct: 192  HRIDLIAYFEQHLEV--MDEEAKRRLHTNPLRILDTKNPAMQAMVNAAPQLLAYLGEESQ 249

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q IL +NN+ + IN +LVRGMDYYNRTVFEW TD+LGSQ ++C GGRYD L   
Sbjct: 250  AHFDGVQNILRHNNVPFTINPRLVRGMDYYNRTVFEWVTDELGSQGTVCAGGRYDTLFDM 309

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
            F  K  P+ GFA+GIERL+EL+K     +  S QCD+Y+VH G  A+LKA V++E LR  
Sbjct: 310  FGGKPTPSCGFAMGIERLLELMKAGGEKYAGS-QCDVYVVHQGDAAQLKASVVAERLRDA 368

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR-NKYEDPTL 1226
            GL V+L+C   +   S K+QMKRA+AS A FA I+GE+E+  +   +K LR    E    
Sbjct: 369  GLDVVLHCASASS-SSVKAQMKRADASGAAFAVILGEDEVAGDMATVKALRATDGETHQH 427

Query: 1227 KQISISFKDAENYFYKKII 1245
            +Q  + F    +Y   +II
Sbjct: 428  QQALVPFDSVADYLVDQII 446


>gi|160900447|ref|YP_001566029.1| GTP-binding protein EngA [Delftia acidovorans SPH-1]
 gi|333913255|ref|YP_004486987.1| ribosome-associated GTPase EngA [Delftia sp. Cs1-4]
 gi|238687162|sp|A9BMU9.1|DER_DELAS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|160366031|gb|ABX37644.1| small GTP-binding protein [Delftia acidovorans SPH-1]
 gi|333743455|gb|AEF88632.1| ribosome-associated GTPase EngA [Delftia sp. Cs1-4]
          Length = 448

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/431 (48%), Positives = 308/431 (71%), Gaps = 5/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G  GK  +I+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM +QT+QA+ E+D+++F+VD R G+  QD  I  +LR+ G+P VLV NK
Sbjct: 61  EPDASSGIFKEMARQTQQAVAEADVVVFVVDARLGMSAQDHDIAKYLRRLGKPCVLVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E +   + L +FYELG+G+   +SA +G G+++ L+  L  + LP  +  +   F ++ 
Sbjct: 121 AEGMKEGVQLTEFYELGLGDVLPVSAAHGQGVRDLLDLALGQLNLPEPE--EDDPFDDV- 177

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           + + I++ + G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE   +K+ LIDTA
Sbjct: 178 AQKPIRLTVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERAGQKFELIDTA 237

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ + FE IEKFSV+KTL++I  ANVV+LL+DA Q ++ QD +IA ++ ESGR++++
Sbjct: 238 GLRRKGRVFEAIEKFSVVKTLQAIESANVVLLLIDATQGVTDQDAHIAGYVLESGRAVVL 297

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR++++ +I+ +L+FL FA  +FISA K   +     SI   + ++   
Sbjct: 298 AVNKWDAVDDYQRQMLERSIETRLSFLKFAPMHFISAEKRQGLGPLWNSIIQAHKAATCK 357

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T  +TR L+ A++   P +  + RPK+RYAHQGG NPP+IVIHGN L+++   YKR+L
Sbjct: 358 MPTPVLTRLLMEAVQFQTPKKTGIYRPKMRYAHQGGMNPPVIVIHGNSLEHVTEAYKRFL 417

Query: 419 EKYFYRTFSLI 429
           E  F + F+L+
Sbjct: 418 EGRFRKEFNLV 428


>gi|187924517|ref|YP_001896159.1| histidyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|229558663|sp|B2SXS9.1|SYH_BURPP RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|187715711|gb|ACD16935.1| histidyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 446

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/352 (55%), Positives = 262/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI +++KH D     E+ K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++S 
Sbjct: 183  HRVELIAHLEKHMDV--LDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRILKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +       CD+Y+VH G  A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEQLVPE-DEGCDVYVVHQGDAAREQAFIIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C  +    SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+
Sbjct: 360  GLDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD 411


>gi|381353380|pdb|4E51|A Chain A, Crystal Structure Of A Histidyl-Trna Synthetase Hisrs From
            Burkholderia Thailandensis Bound To Histidine
 gi|381353381|pdb|4E51|B Chain B, Crystal Structure Of A Histidyl-Trna Synthetase Hisrs From
            Burkholderia Thailandensis Bound To Histidine
          Length = 467

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/358 (55%), Positives = 262/358 (73%), Gaps = 7/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 84   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 143

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+++MC RLW++L L  I LE+NS+G   ER  
Sbjct: 144  RPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSLGLAEERAA 203

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S 
Sbjct: 204  HRVELIKYLEQHADK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSR 261

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 262  AHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 321

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+GIER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 322  LGGKPTAACGWAMGIERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 378

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
              GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N T  +K LR   +D
Sbjct: 379  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDD 436


>gi|167562546|ref|ZP_02355462.1| radical SAM enzyme, Cfr family protein [Burkholderia oklahomensis
           EO147]
          Length = 378

 Score =  428 bits (1100), Expect = e-116,   Method: Composition-based stats.
 Identities = 199/340 (58%), Positives = 256/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGSGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGREPGPNGRADRVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+DKL  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDKLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL++L R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLALTRD----VPCKFNLIPFNPFPESGLVRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 DQIKRFAQVLIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|413962507|ref|ZP_11401734.1| histidyl-tRNA ligase [Burkholderia sp. SJ98]
 gi|413928339|gb|EKS67627.1| histidyl-tRNA ligase [Burkholderia sp. SJ98]
          Length = 449

 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/387 (51%), Positives = 274/387 (70%), Gaps = 7/387 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L++RPE TA+V+R+ IE+NL+YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRATIEHNLLYDGPKRLWYVGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LELNS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDTDAEIIMMCQRLWDDLGLTGIRLELNSLGQAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +LI Y++KH DS    E+ K  LY N LRVLD+KN  ++EI  NAPKL+D+L   S 
Sbjct: 183  HRKELIAYLEKHVDS--LDEEAKRRLYTNPLRVLDTKNPAMQEIAQNAPKLVDFLGDASR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGGRYD LI++
Sbjct: 241  KHFEGVQRLLKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAGGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+G+ER++EL+K+  +    +   D+Y+VH G+ A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGVERILELLKEEQLVPE-AEGTDVYVVHQGEAAAEQAFIVAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTL- 1226
            GL VIL+C  +    SFKSQMK+A+AS A FA ++GE+E+    + +K LR   ++ +  
Sbjct: 360  GLDVILHCSPDGASASFKSQMKKADASGAAFAVVLGEDELAQGMIGVKPLRRSIDETSGG 419

Query: 1227 ---KQISISFKDAENYFYKKIIKNINN 1250
               +Q+++  +D   Y    ++   ++
Sbjct: 420  QKNEQVNVRAEDLTEYLINAMVATADD 446


>gi|416920669|ref|ZP_11932606.1| radical SAM superfamily protein [Burkholderia sp. TJI49]
 gi|325526956|gb|EGD04412.1| radical SAM superfamily protein [Burkholderia sp. TJI49]
          Length = 379

 Score =  428 bits (1100), Expect = e-116,   Method: Composition-based stats.
 Identities = 199/340 (58%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRATISMPEIASDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KKYPL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKYPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA+IL+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQILIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|83720408|ref|YP_442753.1| radical SAM protein [Burkholderia thailandensis E264]
 gi|167619819|ref|ZP_02388450.1| radical SAM enzyme, Cfr family protein [Burkholderia thailandensis
           Bt4]
 gi|123753780|sp|Q2SWE6.1|RLMN_BURTA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|83654233|gb|ABC38296.1| radical SAM enzyme, Cfr family [Burkholderia thailandensis E264]
          Length = 378

 Score =  427 bits (1099), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 257/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL++L R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLALTRD----VPCKFNLIPFNPFPESGLLRSKT 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|167581703|ref|ZP_02374577.1| radical SAM enzyme, Cfr family protein [Burkholderia thailandensis
           TXDOH]
          Length = 378

 Score =  427 bits (1099), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 257/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL++L R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLALTRD----VPCKFNLIPFNPFPESGLLRSKT 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|167719265|ref|ZP_02402501.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           DM98]
 gi|418382995|ref|ZP_12966914.1| radical SAM protein [Burkholderia pseudomallei 354a]
 gi|418553140|ref|ZP_13117978.1| radical SAM protein [Burkholderia pseudomallei 354e]
 gi|385372074|gb|EIF77206.1| radical SAM protein [Burkholderia pseudomallei 354e]
 gi|385376834|gb|EIF81469.1| radical SAM protein [Burkholderia pseudomallei 354a]
          Length = 378

 Score =  427 bits (1099), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 257/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLVRSKT 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA+IL+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQILIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|73541777|ref|YP_296297.1| hypothetical protein Reut_A2089 [Ralstonia eutropha JMP134]
 gi|123732898|sp|Q46ZI0.1|RLMN_CUPPJ RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|72119190|gb|AAZ61453.1| 23S rRNA m(2)A-2503 methyltransferase [Ralstonia eutropha JMP134]
          Length = 384

 Score =  427 bits (1099), Expect = e-116,   Method: Composition-based stats.
 Identities = 197/339 (58%), Positives = 257/339 (75%), Gaps = 7/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRA+QLQ+WIH+FG S F+ M+DL+ SLR+KL     I++P  ++D +S DGTR
Sbjct: 21  ELGEKPFRARQLQRWIHQFGASRFDAMSDLAKSLREKLATRAEIRSPAAITDNLSADGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL
Sbjct: 81  KWLLDVGNGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF +R +  +    +  R I+N+VMMGMGEPLLNY + + A++L+L D+AYGLSRR 
Sbjct: 141 WMAEFAMREQ--LGRGPKDDRVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRR 198

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ +
Sbjct: 199 VTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEF 258

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA EL+ L+        CK NLIPFN FP S L  S N 
Sbjct: 259 APRDFITFEYCMLDGVNDGVEHARELLKLVAD----VPCKFNLIPFNPFPESGLKRSNND 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +I+ FA++LM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 315 QIRRFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|83720664|ref|YP_442756.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|257138966|ref|ZP_05587228.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|123726593|sp|Q2SWE3.1|SYH_BURTA RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|83654489|gb|ABC38552.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 446

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/358 (55%), Positives = 262/358 (73%), Gaps = 7/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+++MC RLW++L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQHADK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+GIER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 301  LGGKPTAACGWAMGIERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 357

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
              GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N T  +K LR   +D
Sbjct: 358  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDD 415


>gi|260221255|emb|CBA29636.1| GTP-binding protein engA [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 445

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/433 (49%), Positives = 303/433 (69%), Gaps = 11/433 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA+Y GLTRDRHYG G  GK+ FI+IDTGGF
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKTRDAIVADYAGLTRDRHYGNGKHGKQEFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D+++F+VD R GL  QD  I N+LRK G+P ++V NK
Sbjct: 61  EPDAGSGIFKEMAKQTRQAVAEADVVVFVVDARAGLSAQDHDIGNYLRKLGKPCLVVANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE---NILTIELPYKKFFKKKEFTN 176
           +E + +   L +F+ELG+G    +SA +G G+++ +E   + L +E P       ++   
Sbjct: 121 AEGMKAGSQLAEFFELGLGEVFPVSAAHGQGMRSLIEMALDALHLEEP-------EDDPE 173

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
                 IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE   +K+ L+D
Sbjct: 174 PSDPSVIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFEREGQKFELVD 233

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+R++ K FE IEKFSV+KTL++I  A+VV+LL+DA+Q ++ QD +IA +I ESGR++
Sbjct: 234 TAGLRKKGKVFEAIEKFSVVKTLQAIESASVVLLLIDAEQGVTDQDAHIAGYILESGRAV 293

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           +V VNKWD+I   QR+++K +++ +L FL FA  + ISA K   +     +I   + ++ 
Sbjct: 294 VVAVNKWDAIDEYQRELVKRSLETRLGFLKFAALHLISAKKRQGLGPLWGAIAQAHKAAN 353

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
             + T  +TR L+ A++   P +    RPKLRYAHQGG NPPIIVIHGN L+++   YKR
Sbjct: 354 CKMPTPVLTRLLLEAVQFQTPKKTGAYRPKLRYAHQGGMNPPIIVIHGNSLEHVTEAYKR 413

Query: 417 YLEKYFYRTFSLI 429
           +LE  F + F+LI
Sbjct: 414 FLEGRFRKEFNLI 426


>gi|167569729|ref|ZP_02362603.1| radical SAM enzyme, Cfr family protein [Burkholderia oklahomensis
           C6786]
          Length = 378

 Score =  427 bits (1098), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 256/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGSGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGREPGPNGRADRVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+DKL  E PV LAVSLHA N+ LR++LVP+++K+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDKLGAELPVALAVSLHAPNDALRDELVPLNRKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL++L R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLALTRD----VPCKFNLIPFNPFPESGLVRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 DQIKRFAQVLIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|385209019|ref|ZP_10035887.1| histidyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|385181357|gb|EIF30633.1| histidyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 446

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/352 (55%), Positives = 263/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G  +ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLEINSLGLAHERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI +++KH D     E+ K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++S 
Sbjct: 183  HRVELIAHLEKHMDV--LDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q+IL  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFDGLQRILKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +       CD+Y+VH G  A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEQLVPE-DEGCDVYVVHQGDAAREEAFIIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VIL+C  +    SFKSQMKRA+AS A FA ++GE+EI N T+ +K LR+
Sbjct: 360  GLDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD 411


>gi|167581706|ref|ZP_02374580.1| histidyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 446

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/358 (55%), Positives = 261/358 (72%), Gaps = 7/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQHADK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+GIER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 301  LGGKPTAACGWAMGIERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 357

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
              GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N T  +K LR   +D
Sbjct: 358  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTASVKPLRGTGDD 415


>gi|53719145|ref|YP_108131.1| hypothetical protein BPSL1511 [Burkholderia pseudomallei K96243]
 gi|53723553|ref|YP_103007.1| radical SAM protein [Burkholderia mallei ATCC 23344]
 gi|67639886|ref|ZP_00438715.1| radical SAM enzyme, Cfr family [Burkholderia mallei GB8 horse 4]
 gi|76811596|ref|YP_333752.1| radical SAM protein [Burkholderia pseudomallei 1710b]
 gi|121600638|ref|YP_993156.1| radical SAM protein [Burkholderia mallei SAVP1]
 gi|124383540|ref|YP_001026069.1| radical SAM protein [Burkholderia mallei NCTC 10229]
 gi|126440813|ref|YP_001059227.1| radical SAM protein [Burkholderia pseudomallei 668]
 gi|126450494|ref|YP_001080663.1| radical SAM protein [Burkholderia mallei NCTC 10247]
 gi|126453816|ref|YP_001066494.1| radical SAM protein [Burkholderia pseudomallei 1106a]
 gi|134277659|ref|ZP_01764374.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 305]
 gi|167002245|ref|ZP_02268035.1| radical SAM enzyme, Cfr family [Burkholderia mallei PRL-20]
 gi|167738262|ref|ZP_02411036.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           14]
 gi|167815452|ref|ZP_02447132.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           91]
 gi|167845403|ref|ZP_02470911.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           B7210]
 gi|167902394|ref|ZP_02489599.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|167910636|ref|ZP_02497727.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           112]
 gi|217421523|ref|ZP_03453027.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 576]
 gi|242316984|ref|ZP_04816000.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 1106b]
 gi|254177964|ref|ZP_04884619.1| radical SAM enzyme, Cfr family [Burkholderia mallei ATCC 10399]
 gi|254179549|ref|ZP_04886148.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 1655]
 gi|254189060|ref|ZP_04895571.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei Pasteur
           52237]
 gi|254197853|ref|ZP_04904275.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei S13]
 gi|254199953|ref|ZP_04906319.1| radical SAM enzyme, Cfr family [Burkholderia mallei FMH]
 gi|254206286|ref|ZP_04912638.1| radical SAM enzyme, Cfr family [Burkholderia mallei JHU]
 gi|254259301|ref|ZP_04950355.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 1710a]
 gi|254297426|ref|ZP_04964879.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 406e]
 gi|386861532|ref|YP_006274481.1| radical SAM protein [Burkholderia pseudomallei 1026b]
 gi|403518922|ref|YP_006653055.1| radical SAM protein [Burkholderia pseudomallei BPC006]
 gi|418539384|ref|ZP_13104980.1| radical SAM protein [Burkholderia pseudomallei 1026a]
 gi|418540676|ref|ZP_13106201.1| radical SAM protein [Burkholderia pseudomallei 1258a]
 gi|418546921|ref|ZP_13112107.1| radical SAM protein [Burkholderia pseudomallei 1258b]
 gi|81379862|sp|Q63UT5.1|RLMN_BURPS RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|81604959|sp|Q62JW2.1|RLMN_BURMA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|123744447|sp|Q3JRQ1.1|RLMN_BURP1 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|205829680|sp|A3MK77.1|RLMN_BURM7 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|205829681|sp|A2S2A0.1|RLMN_BURM9 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|205829682|sp|A1V4K3.1|RLMN_BURMS RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|205829683|sp|A3NVX3.1|RLMN_BURP0 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|205829684|sp|A3NA56.1|RLMN_BURP6 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|52209559|emb|CAH35512.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52426976|gb|AAU47569.1| radical SAM enzyme, Cfr family [Burkholderia mallei ATCC 23344]
 gi|76581049|gb|ABA50524.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 1710b]
 gi|121229448|gb|ABM51966.1| radical SAM enzyme, Cfr family [Burkholderia mallei SAVP1]
 gi|124291560|gb|ABN00829.1| radical SAM enzyme, Cfr family [Burkholderia mallei NCTC 10229]
 gi|126220306|gb|ABN83812.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 668]
 gi|126227458|gb|ABN90998.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 1106a]
 gi|126243364|gb|ABO06457.1| radical SAM enzyme, Cfr family [Burkholderia mallei NCTC 10247]
 gi|134251309|gb|EBA51388.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 305]
 gi|147749549|gb|EDK56623.1| radical SAM enzyme, Cfr family [Burkholderia mallei FMH]
 gi|147753729|gb|EDK60794.1| radical SAM enzyme, Cfr family [Burkholderia mallei JHU]
 gi|157807225|gb|EDO84395.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 406e]
 gi|157936739|gb|EDO92409.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei Pasteur
           52237]
 gi|160699003|gb|EDP88973.1| radical SAM enzyme, Cfr family [Burkholderia mallei ATCC 10399]
 gi|169654594|gb|EDS87287.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei S13]
 gi|184210089|gb|EDU07132.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 1655]
 gi|217395265|gb|EEC35283.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 576]
 gi|238520497|gb|EEP83956.1| radical SAM enzyme, Cfr family [Burkholderia mallei GB8 horse 4]
 gi|242140223|gb|EES26625.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 1106b]
 gi|243062062|gb|EES44248.1| radical SAM enzyme, Cfr family [Burkholderia mallei PRL-20]
 gi|254217990|gb|EET07374.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei 1710a]
 gi|385346008|gb|EIF52701.1| radical SAM protein [Burkholderia pseudomallei 1026a]
 gi|385360810|gb|EIF66717.1| radical SAM protein [Burkholderia pseudomallei 1258a]
 gi|385362720|gb|EIF68525.1| radical SAM protein [Burkholderia pseudomallei 1258b]
 gi|385658660|gb|AFI66083.1| radical SAM protein [Burkholderia pseudomallei 1026b]
 gi|403074564|gb|AFR16144.1| radical SAM protein [Burkholderia pseudomallei BPC006]
          Length = 378

 Score =  427 bits (1097), Expect = e-116,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 257/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLVRSKT 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|167619822|ref|ZP_02388453.1| histidyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 446

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/358 (55%), Positives = 261/358 (72%), Gaps = 7/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQHADK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+GIER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 301  LGGKPTAACGWAMGIERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 357

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
              GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N T  +K LR   +D
Sbjct: 358  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDD 415


>gi|73541773|ref|YP_296293.1| histidyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|83305877|sp|Q46ZI4.1|SYH_CUPPJ RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|72119186|gb|AAZ61449.1| histidyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 456

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/352 (56%), Positives = 263/352 (74%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 77   GEVTDIVEKEMYSFTDALNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHE 136

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPD+DAE+I+MC RLW +L L  + LE+NS+G  +ER  
Sbjct: 137  RPQRGRYRQFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTGVRLEINSLGQAHERAA 196

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +LI Y++  KD     ED K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++SL
Sbjct: 197  HREELIKYLEGFKDI--LDEDGKRRLYTNPLRVLDTKNPALQEMAANAPKLIDFLGEESL 254

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI YKIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI +
Sbjct: 255  AHFEGVQRLLKANNIPYKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIAQ 314

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+GIER+IELI++  +  + +  CD+Y+VH G+ A+ +A V +E LR  
Sbjct: 315  MGGKAAPACGWAMGIERIIELIREEGVVPD-AVGCDVYLVHQGEAAQQQATVAAERLRDA 373

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL V+L+   +    SFKSQMKRA+AS A +A IIGE+E+    + +K+LR 
Sbjct: 374  GLDVVLHATPDGKSGSFKSQMKRADASGAAYAVIIGEDEVAAGVVQVKELRQ 425


>gi|209521129|ref|ZP_03269857.1| radical SAM enzyme, Cfr family [Burkholderia sp. H160]
 gi|209498439|gb|EDZ98566.1| radical SAM enzyme, Cfr family [Burkholderia sp. H160]
          Length = 383

 Score =  426 bits (1096), Expect = e-116,   Method: Composition-based stats.
 Identities = 196/344 (56%), Positives = 259/344 (75%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P ++SD IS DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATITMPGVVSDHISSDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLIDVGNGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRREKN------IKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR  +       +  + +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASRGDAGGRAMGGDGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA N+ LR++LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPNDALRDELVPLNKKYPLRELMAACE 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++ HA +L+++ R       CK NLIPFN FP S LI
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAHARQLLAVTRD----VPCKFNLIPFNPFPESGLI 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK  +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKQEQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|194290009|ref|YP_002005916.1| hypothetical protein RALTA_A1912 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223844|emb|CAQ69853.1| Conserved hypothetical protein; radical SAM enzyme, Cfr family
           domain; putative iron binding enzyme [Cupriavidus
           taiwanensis LMG 19424]
          Length = 384

 Score =  426 bits (1096), Expect = e-116,   Method: Composition-based stats.
 Identities = 195/339 (57%), Positives = 258/339 (76%), Gaps = 7/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRA+QLQ+WIH +G S F+ M+DL+ SLR+KL     I+AP +++D +S DGTR
Sbjct: 21  ELGEKPFRARQLQRWIHHYGASRFDAMSDLAKSLREKLATRAEIRAPAVITDNLSADGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQL
Sbjct: 81  KWLLDVGEGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF +R +  +    +  R I+N+VMMGMGEPLLNY + + A++L+L D+AYGLSRR 
Sbjct: 141 WMAEFAMREQ--LGRGPKDDRVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRR 198

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ +
Sbjct: 199 VTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEF 258

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA EL+ L+        CK NLIPFN FP S L  S N 
Sbjct: 259 APRDFITFEYCMLDGVNDGVEHARELLKLVAD----VPCKFNLIPFNPFPESGLKRSNNE 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +I+ FA++LM++G+  TIRK RG+DI+AACGQL+GE  D
Sbjct: 315 QIRRFAQVLMDAGVVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|430806169|ref|ZP_19433284.1| Radical SAM enzyme, Cfr family protein [Cupriavidus sp. HMR-1]
 gi|429501549|gb|EKZ99880.1| Radical SAM enzyme, Cfr family protein [Cupriavidus sp. HMR-1]
          Length = 384

 Score =  426 bits (1096), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/339 (58%), Positives = 256/339 (75%), Gaps = 7/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRA+QLQ+WIH+FG S F+ MTDL+ SLR+KL     I++P  +SD  S DGTR
Sbjct: 21  ELGEKPFRARQLQRWIHQFGASHFDAMTDLAKSLREKLATRAEIRSPAAISDNTSSDGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETV+IPE  R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQL
Sbjct: 81  KWLLDVGDGNAVETVYIPEDTRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF +R +  +    + +R I+N+VMMGMGEPLLNY + + A++L+L D+AYGLSRR 
Sbjct: 141 WMAEFAMRAQ--LGRGPKDERVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRR 198

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP+++KYPL EL+ AC RY+ +
Sbjct: 199 VTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNRKYPLAELMAACRRYLEF 258

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA EL+ L+        CK NLIPFN FP S L  S N 
Sbjct: 259 APRDFITFEYCMLDGVNDGVEHARELLKLVAD----VPCKFNLIPFNPFPESGLKRSNNE 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +I+ FA+ILM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 315 QIRRFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVMD 353


>gi|78066584|ref|YP_369353.1| hypothetical protein Bcep18194_A5115 [Burkholderia sp. 383]
 gi|123770007|sp|Q39FQ7.1|RLMN_BURS3 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|77967329|gb|ABB08709.1| 23S rRNA m(2)A-2503 methyltransferase [Burkholderia sp. 383]
          Length = 379

 Score =  426 bits (1096), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIGMPEIASDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KKYPL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDPLRDELVPLNKKYPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|206560249|ref|YP_002231013.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
 gi|421866980|ref|ZP_16298642.1| Ribosomal RNA large subunit methyltransferase N [Burkholderia
           cenocepacia H111]
 gi|444359172|ref|ZP_21160500.1| 23S rRNA m2A2503 methyltransferase [Burkholderia cenocepacia BC7]
 gi|444370037|ref|ZP_21169731.1| 23S rRNA m2A2503 methyltransferase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|254807159|sp|B4EAX1.1|RLMN_BURCJ RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|198036290|emb|CAR52186.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
 gi|358073144|emb|CCE49520.1| Ribosomal RNA large subunit methyltransferase N [Burkholderia
           cenocepacia H111]
 gi|443598135|gb|ELT66520.1| 23S rRNA m2A2503 methyltransferase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443602509|gb|ELT70584.1| 23S rRNA m2A2503 methyltransferase [Burkholderia cenocepacia BC7]
          Length = 379

 Score =  426 bits (1096), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIVMPEIASDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KKYPL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKYPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|254358299|ref|ZP_04974572.1| radical SAM enzyme, Cfr family [Burkholderia mallei 2002721280]
 gi|148027426|gb|EDK85447.1| radical SAM enzyme, Cfr family [Burkholderia mallei 2002721280]
          Length = 378

 Score =  426 bits (1096), Expect = e-116,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 256/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNADDFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLVRSKT 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|171059545|ref|YP_001791894.1| GTP-binding protein EngA [Leptothrix cholodnii SP-6]
 gi|238689085|sp|B1XXK9.1|DER_LEPCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|170776990|gb|ACB35129.1| small GTP-binding protein [Leptothrix cholodnii SP-6]
          Length = 448

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/430 (48%), Positives = 298/430 (69%), Gaps = 3/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ +VGRPNVGKSTLFNRLT  RDA+VA++ GLTRDRHYG+G +    FI+IDTGGF
Sbjct: 1   MKPVIAIVGRPNVGKSTLFNRLTGRRDAIVADFAGLTRDRHYGDGKLDNHEFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ E+D ++F+VD R GL  QD  I  +LR +G+ ++L  NK
Sbjct: 61  EPDSTSGIYKEMAKQTRQAVAEADAVVFVVDVRAGLSAQDHDIARYLRATGKRVLLAANK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +     L +FYELG+G P  +S+ +G G+++ +E  + +E       ++        
Sbjct: 121 AEGMKDGPQLAEFYELGMGEPLAVSSAHGQGVRSLIE--MALEGIEPPEPEEGYSEEELR 178

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE  +KKY LIDTAG
Sbjct: 179 NRPTRLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAIHVPFERGDKKYELIDTAG 238

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I +ANVV+LL+DA + +S QD +IA ++ ++GR++++ 
Sbjct: 239 LRRKGKVFESIEKFSVVKTLQAISDANVVLLLIDATEGVSDQDAHIAGYVLDAGRAVVIA 298

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD+I   QR+ ++ +I+++L FL FA    ISA K   +    ++I+  + S+   L
Sbjct: 299 INKWDAIDSYQRETLQRSIEQRLAFLKFAPVLMISAKKRQGLGPLWKAIDDAWASATRKL 358

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T ++TR L+ A++   P R   +RPKLRYAHQGG+NPPIIVIHGN ++++   YKRYLE
Sbjct: 359 PTPQLTRLLLEAVEYQQPKRAGAVRPKLRYAHQGGQNPPIIVIHGNAVEHVTEVYKRYLE 418

Query: 420 KYFYRTFSLI 429
             F   F L+
Sbjct: 419 ARFREHFKLV 428


>gi|167836392|ref|ZP_02463275.1| radical SAM enzyme, Cfr family protein [Burkholderia thailandensis
           MSMB43]
 gi|424904625|ref|ZP_18328135.1| radical SAM enzyme, Cfr family protein [Burkholderia thailandensis
           MSMB43]
 gi|390930603|gb|EIP88005.1| radical SAM enzyme, Cfr family protein [Burkholderia thailandensis
           MSMB43]
          Length = 378

 Score =  426 bits (1095), Expect = e-116,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 256/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP+++K+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNRKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT  HA EL++L R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTQAHARELLALTRD----VPCKFNLIPFNPFPESGLVRSKT 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++GI  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGIVTTIRKTRGDDIDAACGQLAGAVRD 359


>gi|167823864|ref|ZP_02455335.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           9]
 gi|226197115|ref|ZP_03792692.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei Pakistan
           9]
 gi|237812551|ref|YP_002897002.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei MSHR346]
 gi|225930494|gb|EEH26504.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei Pakistan
           9]
 gi|237502725|gb|ACQ95043.1| radical SAM enzyme, Cfr family [Burkholderia pseudomallei MSHR346]
          Length = 378

 Score =  426 bits (1095), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 255/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRREKNIKINSQGK--RQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR          GK  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKVERVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLVRSKT 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|94311047|ref|YP_584257.1| Radical SAM enzyme, Cfr family [Cupriavidus metallidurans CH34]
 gi|123260051|sp|Q1LLI8.1|RLMN_RALME RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|93354899|gb|ABF08988.1| Radical SAM enzyme, Cfr family [Cupriavidus metallidurans CH34]
          Length = 384

 Score =  426 bits (1095), Expect = e-116,   Method: Composition-based stats.
 Identities = 197/339 (58%), Positives = 256/339 (75%), Gaps = 7/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRA+QLQ+WIH+FG S F+ MTDL+ SLR+KL     I++P  +SD  S DGTR
Sbjct: 21  ELGEKPFRARQLQRWIHQFGASHFDAMTDLAKSLREKLATRAEIRSPAAISDHTSSDGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETV+IPE  R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQL
Sbjct: 81  KWLLDVGAGNAVETVYIPEDTRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF +R +  +    + +R I+N+VMMGMGEPLLNY + + A++L+L D+AYGLSRR 
Sbjct: 141 WMAEFAMRAQ--LGRGPKDERVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRR 198

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP+++KYPL EL+ AC RY+ +
Sbjct: 199 VTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNRKYPLAELMAACRRYLEF 258

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA EL+ L+        CK NLIPFN FP S L  S N 
Sbjct: 259 APRDFITFEYCMLDGVNDGVEHARELLKLVAD----VPCKFNLIPFNPFPESGLKRSNNE 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +I+ FA++LM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 315 QIRRFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGEVMD 353


>gi|113868341|ref|YP_726830.1| Fe-S-cluster redox protein [Ralstonia eutropha H16]
 gi|123032871|sp|Q0K959.1|RLMN_CUPNH RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|113527117|emb|CAJ93462.1| Predicted Fe-S-cluster redox enzyme [Ralstonia eutropha H16]
          Length = 384

 Score =  426 bits (1095), Expect = e-116,   Method: Composition-based stats.
 Identities = 196/339 (57%), Positives = 257/339 (75%), Gaps = 7/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRA+QLQ+WIH +G S F+ M+DL+ SLR+KL     I+AP  ++D +S DGTR
Sbjct: 21  ELGEKPFRARQLQRWIHHYGASRFDAMSDLAKSLREKLATRAEIRAPAAITDHLSADGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQL
Sbjct: 81  KWLLDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF +R +  +    +  R I+N+VMMGMGEPLLNY + + A++L+L D+AYGLSRR 
Sbjct: 141 WMAEFAMREQ--LGRGPKDDRVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRR 198

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ +
Sbjct: 199 VTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEF 258

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA EL+ L+        CK NLIPFN FP S L  S N 
Sbjct: 259 APRDFITFEYCMLDGVNDGVEHARELLKLVAD----VPCKFNLIPFNPFPESGLKRSNND 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +I+ FA++LM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 315 QIRRFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|107029007|ref|YP_626102.1| hypothetical protein Bcen_6265 [Burkholderia cenocepacia AU 1054]
 gi|116689835|ref|YP_835458.1| radical SAM protein [Burkholderia cenocepacia HI2424]
 gi|170733174|ref|YP_001765121.1| radical SAM protein [Burkholderia cenocepacia MC0-3]
 gi|123179922|sp|Q1BGX6.1|RLMN_BURCA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|205829678|sp|B1JT94.1|RLMN_BURCC RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|205829679|sp|A0K7T8.1|RLMN_BURCH RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|105898171|gb|ABF81129.1| 23S rRNA m(2)A-2503 methyltransferase [Burkholderia cenocepacia AU
           1054]
 gi|116647924|gb|ABK08565.1| 23S rRNA m(2)A-2503 methyltransferase [Burkholderia cenocepacia
           HI2424]
 gi|169816416|gb|ACA90999.1| radical SAM enzyme, Cfr family [Burkholderia cenocepacia MC0-3]
          Length = 379

 Score =  426 bits (1095), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIVMPDIASDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KKYPL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKYPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|134295842|ref|YP_001119577.1| histidyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166227953|sp|A4JEN9.1|SYH_BURVG RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|134138999|gb|ABO54742.1| histidyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 446

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/356 (55%), Positives = 259/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQHVDV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLAPE-QEGVDVYVVHQGEAAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T  +K LR   ++
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTAGVKALRGAGQE 415


>gi|339326398|ref|YP_004686091.1| ribosomal RNA large subunit methyltransferase N [Cupriavidus
           necator N-1]
 gi|338166555|gb|AEI77610.1| ribosomal RNA large subunit methyltransferase N [Cupriavidus
           necator N-1]
          Length = 384

 Score =  426 bits (1094), Expect = e-116,   Method: Composition-based stats.
 Identities = 196/339 (57%), Positives = 257/339 (75%), Gaps = 7/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRA+QLQ+WIH +G S F+ M+DL+ SLR+KL     I+AP  ++D +S DGTR
Sbjct: 21  ELGEKPFRARQLQRWIHHYGASRFDAMSDLAKSLREKLATRAEIRAPAAITDNLSADGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V + N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQL
Sbjct: 81  KWLLDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF +R +  +    +  R I+N+VMMGMGEPLLNY + + A++L+L D+AYGLSRR 
Sbjct: 141 WMAEFAMREQ--LGRGPKDDRVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRR 198

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ +
Sbjct: 199 VTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEF 258

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA EL+ L+        CK NLIPFN FP S L  S N 
Sbjct: 259 APRDFITFEYCMLDGVNDGVEHARELLKLVAD----VPCKFNLIPFNPFPESGLKRSNND 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +I+ FA++LM++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 315 QIRRFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|387902355|ref|YP_006332694.1| histidyl-tRNA synthetase [Burkholderia sp. KJ006]
 gi|387577247|gb|AFJ85963.1| Histidyl-tRNA synthetase [Burkholderia sp. KJ006]
          Length = 446

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/352 (55%), Positives = 257/352 (73%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQHVDV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLAPE-QEGVDVYVVHQGEAAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T  +K LR 
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTAGVKALRG 411


>gi|241662752|ref|YP_002981112.1| radical SAM enzyme, Cfr family [Ralstonia pickettii 12D]
 gi|240864779|gb|ACS62440.1| radical SAM enzyme, Cfr family [Ralstonia pickettii 12D]
          Length = 383

 Score =  426 bits (1094), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/338 (58%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G SDF +MTDL+ SLR+KL     I+AP +++D +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGASDFGEMTDLAKSLREKLATRANIQAPAVITDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V + N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQLW
Sbjct: 82  WLVDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + AL L+L D+AYGLSRR V
Sbjct: 142 MAEFAMR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPALALMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+LA++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TVSTSGVVPMMDRLARDVPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+NDT  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDTVEHARELLRVVAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|161524637|ref|YP_001579649.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350607|ref|YP_001946235.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221198080|ref|ZP_03571126.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204361|ref|ZP_03577378.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221212770|ref|ZP_03585746.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|421470066|ref|ZP_15918475.1| histidine--tRNA ligase [Burkholderia multivorans ATCC BAA-247]
 gi|229558661|sp|A9AGZ7.1|SYH_BURM1 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|160342066|gb|ABX15152.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334629|dbj|BAG43699.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221166983|gb|EED99453.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221175218|gb|EEE07648.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221182012|gb|EEE14413.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|400228573|gb|EJO58498.1| histidine--tRNA ligase [Burkholderia multivorans ATCC BAA-247]
          Length = 446

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/356 (55%), Positives = 258/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D+    ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDA--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ N+        D+Y+VH G  A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEENLAPE-QEGVDVYVVHQGDAAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR    D
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGTGGD 415


>gi|221198083|ref|ZP_03571129.1| radical SAM enzyme, Cfr family [Burkholderia multivorans CGD2M]
 gi|221204358|ref|ZP_03577375.1| radical SAM enzyme, Cfr family [Burkholderia multivorans CGD2]
 gi|221212767|ref|ZP_03585743.1| radical SAM enzyme, Cfr family [Burkholderia multivorans CGD1]
 gi|421466928|ref|ZP_15915598.1| 23S rRNA m2A2503 methyltransferase [Burkholderia multivorans ATCC
           BAA-247]
 gi|221166980|gb|EED99450.1| radical SAM enzyme, Cfr family [Burkholderia multivorans CGD1]
 gi|221175215|gb|EEE07645.1| radical SAM enzyme, Cfr family [Burkholderia multivorans CGD2]
 gi|221182015|gb|EEE14416.1| radical SAM enzyme, Cfr family [Burkholderia multivorans CGD2M]
 gi|400234184|gb|EJO63658.1| 23S rRNA m2A2503 methyltransferase [Burkholderia multivorans ATCC
           BAA-247]
          Length = 378

 Score =  426 bits (1094), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 255/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASITMPDIVSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLVDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYNAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA+IL+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQILIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|350544503|ref|ZP_08914100.1| Histidyl-tRNA synthetase [Candidatus Burkholderia kirkii UZHbot1]
 gi|350527719|emb|CCD37531.1| Histidyl-tRNA synthetase [Candidatus Burkholderia kirkii UZHbot1]
          Length = 451

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 196/387 (50%), Positives = 276/387 (71%), Gaps = 7/387 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG++L++RPE TA+V+R+ IE+NL+YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGEHLTMRPENTAAVVRATIEHNLLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LELNS+G  +ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDTDAEIIMMCQRLWDDLGLTGIRLELNSLGQADERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +LI Y++KH DS     + K  LY N LR+LD+KN  ++EI  NAPKL+D+L  +S 
Sbjct: 183  HRQELIAYLEKHADS--LDGEAKRRLYTNPLRMLDTKNPAMQEIAQNAPKLVDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGGRYD LI++
Sbjct: 241  RHFEGVQRLLKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAGGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+G+ER++EL+K+  +    +   D+Y+VH G++A  +AF+++E LR  
Sbjct: 301  LGGKPTAACGWAMGVERILELLKEERLVPE-AEGTDVYVVHQGEKAAEQAFIVAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTL- 1226
            GL VIL+C  +    SFKSQMK+A+AS A FA ++GE+E+    + +K LR    + +  
Sbjct: 360  GLDVILHCSPDGASASFKSQMKKADASGAAFAVVLGEDELAQGMIGVKPLRRSGGETSDG 419

Query: 1227 ---KQISISFKDAENYFYKKIIKNINN 1250
               +Q+++  +D   Y    ++   ++
Sbjct: 420  QKNEQVNVRAEDLTEYLINAMVATADD 446


>gi|421478076|ref|ZP_15925847.1| 23S rRNA m2A2503 methyltransferase [Burkholderia multivorans CF2]
 gi|400225322|gb|EJO55497.1| 23S rRNA m2A2503 methyltransferase [Burkholderia multivorans CF2]
          Length = 378

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 255/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNARDFDGMTDLAKSLREKLKGRASITMPDIVSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLVDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYNAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA+IL+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQILIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|385209016|ref|ZP_10035884.1| 23S rRNA m2A2503 methyltransferase [Burkholderia sp. Ch1-1]
 gi|385181354|gb|EIF30630.1| 23S rRNA m2A2503 methyltransferase [Burkholderia sp. Ch1-1]
          Length = 383

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 197/344 (57%), Positives = 257/344 (74%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD IS DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATISMPGIVSDHISTDGTRK 83

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLIDVGNSNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRREKNIKI------NSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR  + +        + +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASRGVDGGRATGGDGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA ++ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQ 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++  A EL+++ R       CK NLIPFN FP S LI
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAQARELLAVTRD----VPCKFNLIPFNPFPESGLI 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK  +IK FA++LM++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKPEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|186476180|ref|YP_001857650.1| radical SAM protein [Burkholderia phymatum STM815]
 gi|205829685|sp|B2JIV3.1|RLMN_BURP8 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|184192639|gb|ACC70604.1| radical SAM enzyme, Cfr family [Burkholderia phymatum STM815]
          Length = 382

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 196/344 (56%), Positives = 258/344 (75%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P ++SD IS DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRASITMPPVVSDHISSDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL  GEIIGQL 
Sbjct: 84  WLVDVGNGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLGTGEIIGQLR 143

Query: 655 VTEFKLRREKNIKI------NSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR  +          + +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASRGTAGGRATGGDGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA N+ LR++LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPNDALRDELVPLNKKYPLRELMAACQ 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++ HA EL+++ R       CK NLIPFN FP S L+
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAHARELLAVTRD----VPCKFNLIPFNPFPESGLL 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK+ +IK FA++LM++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKSEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|390568820|ref|ZP_10249112.1| radical SAM enzyme, Cfr family protein [Burkholderia terrae BS001]
 gi|420250111|ref|ZP_14753338.1| 23S rRNA methyltransferase [Burkholderia sp. BT03]
 gi|389939169|gb|EIN01006.1| radical SAM enzyme, Cfr family protein [Burkholderia terrae BS001]
 gi|398062477|gb|EJL54251.1| 23S rRNA methyltransferase [Burkholderia sp. BT03]
          Length = 382

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 197/344 (57%), Positives = 256/344 (74%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+W+H++  +DF+ MTDL+ SLR+KLK    I  P I+SD IS DGTRK
Sbjct: 24  LGEKPFRAKQLQRWLHQYNAADFDGMTDLAKSLREKLKGRASITMPPIVSDHISTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQL 
Sbjct: 84  WLVDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLR 143

Query: 655 VTEFKLRRE------KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR        +      +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASLGTAGGRATGGEGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA N+ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPNDALRDVLVPLNKKYPLRELMAACQ 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++ HA EL+++ R       CK NLIPFN FP S L 
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAHARELLAVTRD----VPCKFNLIPFNPFPESGLF 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SKN +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKNEQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|167893945|ref|ZP_02481347.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           7894]
 gi|167918665|ref|ZP_02505756.1| radical SAM enzyme, Cfr family protein [Burkholderia pseudomallei
           BCC215]
          Length = 378

 Score =  425 bits (1093), Expect = e-116,   Method: Composition-based stats.
 Identities = 196/340 (57%), Positives = 257/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKAFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRAVIGTPDILSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+ +V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQL 
Sbjct: 84  WLINVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVITNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+++L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMERLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S L+ SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLVRSKT 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  TIRK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTIRKTRGDDIDAACGQLAGAVKD 359


>gi|17545931|ref|NP_519333.1| hypothetical protein RSc1212 [Ralstonia solanacearum GMI1000]
 gi|81505540|sp|Q8Y032.1|RLMN_RALSO RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|17428226|emb|CAD14914.1| conserved hypothetical protein 48 [Ralstonia solanacearum GMI1000]
          Length = 383

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 196/338 (57%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G +DF +MTDL+ SLR+KL     I+AP ++SD +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGAADFGEMTDLAKSLREKLATRATIQAPAVISDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQLW
Sbjct: 82  WLVDVGAGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR V
Sbjct: 142 MAEFAMR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++PM+D+L+Q+ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TLSTSGVVPMMDRLSQDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND+  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDSVEHARELLRVVAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|187928149|ref|YP_001898636.1| radical SAM enzyme, Cfr family [Ralstonia pickettii 12J]
 gi|254807195|sp|B2U9U6.1|RLMN_RALPJ RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|187725039|gb|ACD26204.1| radical SAM enzyme, Cfr family [Ralstonia pickettii 12J]
          Length = 383

 Score =  425 bits (1092), Expect = e-115,   Method: Composition-based stats.
 Identities = 198/338 (58%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G S+F +MTDL+ SLR+KL     I+AP ++SD +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGASEFGEMTDLAKSLREKLATRANIQAPAVISDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V + N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQLW
Sbjct: 82  WLVDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + AL L+L D+AYGLSRR V
Sbjct: 142 MAEFAMR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPALALMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+LA++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TVSTSGVVPMMDRLARDVPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+NDT  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDTVEHARELLRVVAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|187924520|ref|YP_001896162.1| radical SAM enzyme, Cfr family [Burkholderia phytofirmans PsJN]
 gi|205829686|sp|B2SXT2.1|RLMN_BURPP RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|187715714|gb|ACD16938.1| radical SAM enzyme, Cfr family [Burkholderia phytofirmans PsJN]
          Length = 383

 Score =  425 bits (1092), Expect = e-115,   Method: Composition-based stats.
 Identities = 198/344 (57%), Positives = 256/344 (74%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD IS DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATISMPGIVSDNISTDGTRK 83

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT  EIIGQL 
Sbjct: 84  WLIDVGNSNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTAEIIGQLR 143

Query: 655 VTEFKLRREKNIKI------NSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR  + I        + +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASRGIDGGRATGGDGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA ++ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQ 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++  A EL++L R       CK NLIPFN FP S LI
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAQARELLALTRD----VPCKFNLIPFNPFPESGLI 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK  +IK FA++LM++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKPEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|393778483|ref|ZP_10366756.1| Radical SAM enzyme, Cfr family [Ralstonia sp. PBA]
 gi|392714521|gb|EIZ02122.1| Radical SAM enzyme, Cfr family [Ralstonia sp. PBA]
          Length = 390

 Score =  424 bits (1091), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/339 (57%), Positives = 255/339 (75%), Gaps = 7/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE PFRA+QLQ+WIH+ G  +F+ MTDL+ SLR+KL     I+ P  ++D IS DGTR
Sbjct: 21  QLGEKPFRARQLQRWIHQSGADNFDGMTDLARSLREKLATRAEIRTPQAITDHISSDGTR 80

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL
Sbjct: 81  KWLIDVGGGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTAGEIIGQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ EF +R    +    +  R ITN+VMMGMGEPLLNY+  + A++L+L D+AYGLSRR 
Sbjct: 141 WMAEFAMR--ARLGRGPKDPRVITNVVMMGMGEPLLNYEPVVTAMRLMLDDNAYGLSRRR 198

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++PMID+LA++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ +
Sbjct: 199 VTLSTSGVVPMIDRLARDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLAF 258

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND+  HA EL++L+        CK NLIPFN FP S L  S N 
Sbjct: 259 APRDFITFEYCMLDGVNDSIAHARELVALVAD----VPCKFNLIPFNPFPESGLKRSNNE 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +I+ F ++L+++GI  TIRK RG+DI+AACGQL+G+  D
Sbjct: 315 QIRRFGQVLIDAGIVTTIRKTRGDDIDAACGQLAGDVKD 353


>gi|167836396|ref|ZP_02463279.1| histidyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
 gi|424904622|ref|ZP_18328132.1| histidyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
 gi|390930600|gb|EIP88002.1| histidyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 446

 Score =  424 bits (1091), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/356 (54%), Positives = 259/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG++L+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDSLNGEHLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLAGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H +S    +D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQHAES--LDDDAQRRLYTNPLRVLDTKNPALQEIVQNAPKLIDFLGDASR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+G+ER++EL+K+ N+        D+Y+VH G  A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGVERILELLKEENLMPE-QEGVDVYVVHQGDAAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N    +K LR    D
Sbjct: 360  GLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVANGAASVKPLRGAGAD 415


>gi|91784209|ref|YP_559415.1| hypothetical protein Bxe_A1592 [Burkholderia xenovorans LB400]
 gi|123358658|sp|Q13X26.1|RLMN_BURXL RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|91688163|gb|ABE31363.1| 23S rRNA m(2)A-2503 methyltransferase [Burkholderia xenovorans
           LB400]
          Length = 383

 Score =  424 bits (1091), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/344 (56%), Positives = 257/344 (74%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRA+QLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD IS DGTRK
Sbjct: 24  LGEKPFRARQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATISMPGIVSDHISTDGTRK 83

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLIDVGNSNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRREKNIKI------NSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR  + +        + +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASRGVDGGRATGGDGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA ++ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQ 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++  A EL+++ R       CK NLIPFN FP S LI
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAQARELLAVTRD----VPCKFNLIPFNPFPESGLI 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK  +IK FA++LM++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKPEQIKRFAQVLMDAGVITTVRKTRGDDIDAACGQLAGAVKD 363


>gi|134295845|ref|YP_001119580.1| radical SAM protein [Burkholderia vietnamiensis G4]
 gi|387902358|ref|YP_006332697.1| ribosomal RNA large subunit methyltransferase N [Burkholderia sp.
           KJ006]
 gi|205829687|sp|A4JEP2.1|RLMN_BURVG RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|134139002|gb|ABO54745.1| 23S rRNA m(2)A-2503 methyltransferase [Burkholderia vietnamiensis
           G4]
 gi|387577250|gb|AFJ85966.1| Ribosomal RNA large subunit methyltransferase N [Burkholderia sp.
           KJ006]
          Length = 379

 Score =  424 bits (1091), Expect = e-115,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRATIGMPEIASDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYNAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|402566386|ref|YP_006615731.1| radical SAM enzyme, Cfr family [Burkholderia cepacia GG4]
 gi|402247583|gb|AFQ48037.1| radical SAM enzyme, Cfr family [Burkholderia cepacia GG4]
          Length = 379

 Score =  424 bits (1091), Expect = e-115,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 255/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIVMPDIVSDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|309782324|ref|ZP_07677051.1| radical SAM enzyme, Cfr family [Ralstonia sp. 5_7_47FAA]
 gi|404378016|ref|ZP_10983116.1| ribosomal RNA large subunit methyltransferase N [Ralstonia sp.
           5_2_56FAA]
 gi|308918942|gb|EFP64612.1| radical SAM enzyme, Cfr family [Ralstonia sp. 5_7_47FAA]
 gi|348615947|gb|EGY65455.1| ribosomal RNA large subunit methyltransferase N [Ralstonia sp.
           5_2_56FAA]
          Length = 383

 Score =  424 bits (1091), Expect = e-115,   Method: Composition-based stats.
 Identities = 198/338 (58%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G SDF +MTDL+ SLR+KL     I+AP +++D +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGASDFGEMTDLAKSLREKLATRANIQAPAVITDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V + N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQLW
Sbjct: 82  WLVDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + AL L+L D+AYGLSRR V
Sbjct: 142 MAEFAMR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPALALMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+LA++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TVSTSGVVPMMDRLARDVPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACCRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+NDT  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDTVEHARELLRVVAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|115351803|ref|YP_773642.1| radical SAM protein [Burkholderia ambifaria AMMD]
 gi|122323090|sp|Q0BEW5.1|RLMN_BURCM RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|115281791|gb|ABI87308.1| 23S rRNA m(2)A-2503 methyltransferase [Burkholderia ambifaria AMMD]
          Length = 379

 Score =  424 bits (1090), Expect = e-115,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIVMPEIASDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYNAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|170703874|ref|ZP_02894562.1| radical SAM enzyme, Cfr family [Burkholderia ambifaria IOP40-10]
 gi|171321348|ref|ZP_02910305.1| radical SAM enzyme, Cfr family [Burkholderia ambifaria MEX-5]
 gi|170131219|gb|EDS99858.1| radical SAM enzyme, Cfr family [Burkholderia ambifaria IOP40-10]
 gi|171093366|gb|EDT38556.1| radical SAM enzyme, Cfr family [Burkholderia ambifaria MEX-5]
          Length = 379

 Score =  424 bits (1090), Expect = e-115,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIVMPEIASDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|421478075|ref|ZP_15925846.1| histidine--tRNA ligase [Burkholderia multivorans CF2]
 gi|400225321|gb|EJO55496.1| histidine--tRNA ligase [Burkholderia multivorans CF2]
          Length = 446

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/356 (55%), Positives = 257/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ N+        D+Y+VH G  A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEENLAPE-QEGVDVYVVHQGDAAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR    D
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGTGGD 415


>gi|167587047|ref|ZP_02379435.1| radical SAM enzyme, Cfr family protein [Burkholderia ubonensis Bu]
          Length = 379

 Score =  424 bits (1090), Expect = e-115,   Method: Composition-based stats.
 Identities = 198/340 (58%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIVMPDIVSDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR+ LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDMLVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA+IL+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQILIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|172060774|ref|YP_001808426.1| radical SAM protein [Burkholderia ambifaria MC40-6]
 gi|205829677|sp|B1YR46.1|RLMN_BURA4 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|171993291|gb|ACB64210.1| radical SAM enzyme, Cfr family [Burkholderia ambifaria MC40-6]
          Length = 379

 Score =  424 bits (1090), Expect = e-115,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIVMPEIASDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYNAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|330817166|ref|YP_004360871.1| histidyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327369559|gb|AEA60915.1| Histidyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 444

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/361 (54%), Positives = 261/361 (72%), Gaps = 3/361 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL+LRPE TA+V+R+ IE+NL+YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTLRPENTAAVVRAAIEHNLLYDGPKRLWYVGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEAIGF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEAIGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H +     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L + S 
Sbjct: 183  HRVELIKYLEQHVEV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGESSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFDGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+G+ER++EL+K+  +        D+Y+VH G+ A  +AF++ E LR  
Sbjct: 301  LGGKPTAACGWAMGVERILELLKEEQLVPE-QDGVDVYLVHQGEAAREQAFIIGERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL VI +C  +    SFKSQMKRA+AS A +A I+GE+E+ N T  +K LR    + + +
Sbjct: 360  GLDVIFHCSADGASASFKSQMKRADASGAAYAVILGEDEVANGTAGVKALRGAEGEKSAQ 419

Query: 1228 Q 1228
            Q
Sbjct: 420  Q 420


>gi|167569733|ref|ZP_02362607.1| histidyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 446

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/352 (55%), Positives = 258/352 (73%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYVGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H       +D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQH--VAQLDDDAQRRLYTNPLRVLDTKNPALQEIVQNAPKLIDFLGDASR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QK+L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQKLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+G+ER++EL+K+ ++        D+Y+VH G  A  +AFV++E LR  
Sbjct: 301  LGGKPTAACGWAMGVERILELLKEESLVPE-QEGVDVYVVHQGDAAREQAFVVAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL V+L+C  +    SFKSQMKRA+AS A FA I GE+EI N T  +K LR 
Sbjct: 360  GLDVVLHCSADGAGASFKSQMKRADASGAAFAVIFGEDEIANGTASVKPLRG 411


>gi|312796094|ref|YP_004029016.1| histidyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167869|emb|CBW74872.1| Histidyl-tRNA synthetase (EC 6.1.1.21) [Burkholderia rhizoxinica HKI
            454]
          Length = 445

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/358 (54%), Positives = 264/358 (73%), Gaps = 6/358 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+ L++RPE TA+V+R+ IE+NL+YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDSLNGEQLTMRPENTAAVVRAAIEHNLLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIILMCQRLWDDLGLTGIRLEINSLGQAQERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +LI Y+++H   +   +D K  LY N LRVLD+KN  +++I  +APKL+D+L   SL
Sbjct: 183  HRNELIAYLERH--VELLDDDAKRRLYTNPLRVLDTKNPAMQDIATHAPKLIDFLGDASL 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L+ N+I + IN +LVRG+DYYN TVFEW TDKLG+Q ++ GGGRYD LI++
Sbjct: 241  AHFEGVQRLLSANHIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAGGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER++EL+++  +  +    CD+Y+VH G  A  +AFV++E LR  
Sbjct: 301  LGGKPAPACGWALGVERILELLREDQLVPS-DDGCDVYVVHQGDAARERAFVIAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPT 1225
            GL VIL+C  +    SFKSQMKRA+AS A +A I+G++E+  + + IK LR    DP 
Sbjct: 360  GLDVILHCSADGAPASFKSQMKRADASGAAYAVILGDDEVQRDEVSIKALRG---DPA 414


>gi|171321334|ref|ZP_02910293.1| histidyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093391|gb|EDT38579.1| histidyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 446

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/356 (55%), Positives = 259/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++  D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQFADV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR   E+
Sbjct: 360  GLDVIFHCSADGASASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEE 415


>gi|115351800|ref|YP_773639.1| histidyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170702838|ref|ZP_02893687.1| histidyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|172060771|ref|YP_001808423.1| histidyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|122323093|sp|Q0BEW8.1|SYH_BURCM RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|229558658|sp|B1YR43.1|SYH_BURA4 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|115281788|gb|ABI87305.1| histidyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170132256|gb|EDT00735.1| histidyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|171993288|gb|ACB64207.1| histidyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 446

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/356 (55%), Positives = 259/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++  D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQFADV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR   E+
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEE 415


>gi|126440200|ref|YP_001059224.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166227952|sp|A3NA53.1|SYH_BURP6 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|126219693|gb|ABN83199.1| histidine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 446

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/354 (55%), Positives = 261/354 (73%), Gaps = 7/354 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAP+L+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFDGLQRLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+G+ER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 301  LGGKPTAACGWAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 357

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
              GL VIL+C  +    SFKSQMKRA+AS A FA I+GE+E+ N T+ +K LR 
Sbjct: 358  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVILGEDEVANGTVSVKPLRG 411


>gi|170694776|ref|ZP_02885927.1| radical SAM enzyme, Cfr family [Burkholderia graminis C4D1M]
 gi|170140407|gb|EDT08584.1| radical SAM enzyme, Cfr family [Burkholderia graminis C4D1M]
          Length = 383

 Score =  424 bits (1089), Expect = e-115,   Method: Composition-based stats.
 Identities = 197/344 (57%), Positives = 256/344 (74%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD IS DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATISMPGIVSDHISTDGTRK 83

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLIEVGNSNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRRE------KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR        + +    +G+R +TN+VMMGM EPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASLGAAGGRAVGGEGKGERVVTNVVMMGMAEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA ++ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQ 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++  A EL++L R       CK NLIPFN FP S L+
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAQARELLALTRD----VPCKFNLIPFNPFPESGLV 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK+ +IK FA++LM++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKSEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|161524634|ref|YP_001579646.1| radical SAM protein [Burkholderia multivorans ATCC 17616]
 gi|189350610|ref|YP_001946238.1| Cfr family radical SAM enzyme [Burkholderia multivorans ATCC 17616]
 gi|160342063|gb|ABX15149.1| radical SAM enzyme, Cfr family [Burkholderia multivorans ATCC
           17616]
 gi|189334632|dbj|BAG43702.1| Cfr family radical SAM enzyme [Burkholderia multivorans ATCC 17616]
          Length = 378

 Score =  424 bits (1089), Expect = e-115,   Method: Composition-based stats.
 Identities = 197/340 (57%), Positives = 255/340 (75%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   +F+ MTDL+ SLR+KLK    I  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGNFDGMTDLAKSLREKLKGRASITMPDIVSDHVSADGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLVDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVVMMGMGEPLLNYNAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KK+PL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKHPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA+IL+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQILIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|300691809|ref|YP_003752804.1| hypothetical protein RPSI07_2165 [Ralstonia solanacearum PSI07]
 gi|299078869|emb|CBJ51530.1| conserved protein of unknown function, predicted radical SAM enzyme
           [Ralstonia solanacearum PSI07]
 gi|344166998|emb|CCA79189.1| conserved hypothetical protein, predicted radical SAM enzyme [blood
           disease bacterium R229]
          Length = 383

 Score =  423 bits (1088), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/338 (57%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G +DF +MTDL+ SLR+KL     I+AP ++SD +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGAADFGEMTDLAKSLREKLATRATIQAPAVISDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQLW
Sbjct: 82  WLVDVGAGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR V
Sbjct: 142 MAEFAVR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TLSTSGVVPMMDRLSRDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND+  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDSVEHARELLRVIAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|167562550|ref|ZP_02355466.1| histidyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 446

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/352 (55%), Positives = 258/352 (73%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYVGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H       +D +  LY N LRVLD+KN  ++EI+ +APKL+D+L   S 
Sbjct: 183  HRVELIKYLEQH--VAQLDDDAQRRLYTNPLRVLDTKNPALQEIVQSAPKLIDFLGDASR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+QK+L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQKLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+G+ER++EL+K+ ++        D+Y+VH G  A  +AFV++E LR  
Sbjct: 301  LGGKPTAACGWAMGVERILELLKEESLVPE-QEGVDVYVVHQGDAAREQAFVVAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL V+L+C  +    SFKSQMKRA+AS A FA I GE+EI N T  +K LR 
Sbjct: 360  GLDVVLHCSADGAGASFKSQMKRADASGAAFAVIFGEDEIANGTASVKPLRG 411


>gi|299067263|emb|CBJ38460.1| conserved protein of unknown function, predicted radical SAM enzyme
           [Ralstonia solanacearum CMR15]
          Length = 383

 Score =  423 bits (1088), Expect = e-115,   Method: Composition-based stats.
 Identities = 195/338 (57%), Positives = 256/338 (75%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G +DF +MTDL+ SLR+KL     I+AP ++SD +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGAADFGEMTDLAKSLREKLATRATIQAPAVISDNLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQLW
Sbjct: 82  WLVDVGAGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR V
Sbjct: 142 MAEFAMR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++PM+D+L+ + PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TLSTSGVVPMMDRLSHDLPVALAVSLHASNDALRDVLVPLNKKYPLAELVAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND+  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDSVEHARELLRVVAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|83747944|ref|ZP_00944975.1| Radical SAM family enzyme [Ralstonia solanacearum UW551]
 gi|207743447|ref|YP_002259839.1| hypothetical protein 48 [Ralstonia solanacearum IPO1609]
 gi|83725362|gb|EAP72509.1| Radical SAM family enzyme [Ralstonia solanacearum UW551]
 gi|206594844|emb|CAQ61771.1| conserved hypothetical protein 48 [Ralstonia solanacearum IPO1609]
          Length = 383

 Score =  423 bits (1088), Expect = e-115,   Method: Composition-based stats.
 Identities = 195/338 (57%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G +DF +MTDL+ SLR+KL     I+AP ++SD +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGAADFGEMTDLAKSLREKLATRATIQAPAVISDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQLW
Sbjct: 82  WLVDVGAGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR V
Sbjct: 142 MAEFAMR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TLSTSGVVPMMDRLSRDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND+  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDSVEHARELLRVIAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|323526580|ref|YP_004228733.1| radical SAM protein [Burkholderia sp. CCGE1001]
 gi|323383582|gb|ADX55673.1| radical SAM enzyme, Cfr family [Burkholderia sp. CCGE1001]
          Length = 383

 Score =  423 bits (1088), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/344 (56%), Positives = 255/344 (74%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    +  P I+SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATLTMPGIVSDHVSADGTRK 83

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLIDVGNSNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRRE------KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR        +      +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASLGAAGGRATGGEGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA ++ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQ 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++  A EL++L R       CK NLIPFN FP S L+
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAQARELLALTRD----VPCKFNLIPFNPFPESGLV 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK  +IK FA++LM++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSKQEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|402566389|ref|YP_006615734.1| histidyl-tRNA synthetase [Burkholderia cepacia GG4]
 gi|402247586|gb|AFQ48040.1| histidyl-tRNA synthetase [Burkholderia cepacia GG4]
          Length = 446

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/356 (55%), Positives = 259/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++  D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQFADV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLVPE-QEGVDVYVVHQGETAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR   E+
Sbjct: 360  GLDVIFHCSADGATASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEE 415


>gi|300704417|ref|YP_003746020.1| hypothetical protein RCFBP_20221 [Ralstonia solanacearum CFBP2957]
 gi|421888535|ref|ZP_16319625.1| conserved hypothetical protein, predicted radical SAM enzyme
           [Ralstonia solanacearum K60-1]
 gi|299072081|emb|CBJ43413.1| conserved protein of unknown function, predicted radical SAM enzyme
           [Ralstonia solanacearum CFBP2957]
 gi|378966093|emb|CCF96373.1| conserved hypothetical protein, predicted radical SAM enzyme
           [Ralstonia solanacearum K60-1]
          Length = 383

 Score =  423 bits (1087), Expect = e-115,   Method: Composition-based stats.
 Identities = 195/338 (57%), Positives = 256/338 (75%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G +DF +MTDL+ SLR+KL     I+AP ++SD +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGAADFGEMTDLAKSLREKLATRATIQAPAVISDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEI+GQLW
Sbjct: 82  WLVDVGAGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIVGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR V
Sbjct: 142 MAEFAMR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++PM+D+L+ + PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TLSTSGVVPMMDRLSHDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND+  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDSVEHARELLRVVAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|134277363|ref|ZP_01764078.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134251013|gb|EBA51092.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 446

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/354 (55%), Positives = 260/354 (73%), Gaps = 7/354 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAP+L+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFDGLQRLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+G+ER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 301  LGGKPTAACGWAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 357

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
              GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR 
Sbjct: 358  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411


>gi|53723541|ref|YP_103004.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67639883|ref|ZP_00438712.1| histidine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|76811640|ref|YP_333748.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121598300|ref|YP_993153.1| histidyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385953|ref|YP_001026072.1| histidyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449975|ref|YP_001080660.1| histidyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167002242|ref|ZP_02268032.1| histidine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167893949|ref|ZP_02481351.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167910640|ref|ZP_02497731.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167918669|ref|ZP_02505760.1| histidyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217421587|ref|ZP_03453091.1| histidine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|237812548|ref|YP_002896999.1| histidyl-tRNA synthetase [Burkholderia pseudomallei MSHR346]
 gi|254177586|ref|ZP_04884241.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254189058|ref|ZP_04895569.1| histidyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254199950|ref|ZP_04906316.1| histidyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254206283|ref|ZP_04912635.1| histidyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254260769|ref|ZP_04951823.1| histidine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297428|ref|ZP_04964881.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358302|ref|ZP_04974575.1| histidyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|386861535|ref|YP_006274484.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1026b]
 gi|418539387|ref|ZP_13104983.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1026a]
 gi|81685079|sp|Q62JW5.1|SYH_BURMA RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|123598924|sp|Q3JRQ5.1|SYH_BURP1 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|166227948|sp|A3MK74.1|SYH_BURM7 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|166227949|sp|A2S2A3.1|SYH_BURM9 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|166227950|sp|A1V4K0.1|SYH_BURMS RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|52426964|gb|AAU47557.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76581093|gb|ABA50568.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121227110|gb|ABM49628.1| histidyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293973|gb|ABN03242.1| histidine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126242845|gb|ABO05938.1| histidine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147749546|gb|EDK56620.1| histidyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753726|gb|EDK60791.1| histidyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027429|gb|EDK85450.1| histidyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157806820|gb|EDO83990.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936737|gb|EDO92407.1| histidyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698625|gb|EDP88595.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|217395329|gb|EEC35347.1| histidine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|237505085|gb|ACQ97403.1| histidine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238520494|gb|EEP83953.1| histidine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243062059|gb|EES44245.1| histidine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254219458|gb|EET08842.1| histidine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|385346011|gb|EIF52704.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1026a]
 gi|385658663|gb|AFI66086.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1026b]
          Length = 446

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/354 (55%), Positives = 260/354 (73%), Gaps = 7/354 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAP+L+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFDGLQQLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+G+ER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 301  LGGKPTAACGWAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 357

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
              GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR 
Sbjct: 358  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411


>gi|53719148|ref|YP_108134.1| histidyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126453409|ref|YP_001066491.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167719270|ref|ZP_02402506.1| histidyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167738266|ref|ZP_02411040.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167815456|ref|ZP_02447136.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167845407|ref|ZP_02470915.1| histidyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167902398|ref|ZP_02489603.1| histidyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|242314906|ref|ZP_04813922.1| histidine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254179552|ref|ZP_04886151.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|403518919|ref|YP_006653052.1| histidyl-tRNA synthetase [Burkholderia pseudomallei BPC006]
 gi|418540679|ref|ZP_13106204.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1258a]
 gi|418546924|ref|ZP_13112110.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1258b]
 gi|418553143|ref|ZP_13117981.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 354e]
 gi|81690387|sp|Q63UT2.1|SYH_BURPS RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|166227951|sp|A3NVX0.1|SYH_BURP0 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|52209562|emb|CAH35515.1| histidyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126227051|gb|ABN90591.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|184210092|gb|EDU07135.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|242138145|gb|EES24547.1| histidine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|385360813|gb|EIF66720.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1258a]
 gi|385362723|gb|EIF68528.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1258b]
 gi|385372077|gb|EIF77209.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 354e]
 gi|403074561|gb|AFR16141.1| histidyl-tRNA synthetase [Burkholderia pseudomallei BPC006]
          Length = 446

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/354 (55%), Positives = 260/354 (73%), Gaps = 7/354 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAP+L+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFDGLQRLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+G+ER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 301  LGGKPTAACGWAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 357

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
              GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR 
Sbjct: 358  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411


>gi|416938392|ref|ZP_11934266.1| histidyl-tRNA synthetase [Burkholderia sp. TJI49]
 gi|325524775|gb|EGD02749.1| histidyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 446

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/356 (55%), Positives = 259/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++  D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQFVDV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLAPE-QEGVDVYVVHQGEAAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR   E+
Sbjct: 360  GLDVIFHCSADGGPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEE 415


>gi|407714027|ref|YP_006834592.1| ribosomal RNA large subunit methyltransferase N [Burkholderia
           phenoliruptrix BR3459a]
 gi|407236211|gb|AFT86410.1| Ribosomal RNA large subunit methyltransferase N [Burkholderia
           phenoliruptrix BR3459a]
          Length = 388

 Score =  422 bits (1086), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/344 (56%), Positives = 255/344 (74%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    +  P ++SD IS DGTRK
Sbjct: 29  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATLTMPGVVSDHISADGTRK 88

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 89  WLIDVGNSNAVETVFIPEEARGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 148

Query: 655 VTEFKLRRE------KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR        +      +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 149 MAEFALRASLGAAGGRATGGEGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 208

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA ++ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 209 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQ 268

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++  A EL++L R       CK NLIPFN FP S L+
Sbjct: 269 RYLKVAPRDFITFEYCMLDGVNDSEAQARELLALTRD----VPCKFNLIPFNPFPESGLV 324

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            SK  +IK FA++LM++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 325 RSKQEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGAVKD 368


>gi|78066581|ref|YP_369350.1| histidyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123742580|sp|Q39FR0.1|SYH_BURS3 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|77967326|gb|ABB08706.1| histidyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 446

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/356 (55%), Positives = 258/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++  D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQFADV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEDDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR    D
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGGD 415


>gi|344171691|emb|CCA84311.1| conserved hypothetical protein, predicted radical SAM enzyme
           [Ralstonia syzygii R24]
          Length = 383

 Score =  422 bits (1085), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/338 (57%), Positives = 257/338 (76%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G +DF +MTDL+ SLR+KL     I+AP ++SD +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGAADFGEMTDLAKSLREKLAIRATIQAPAVISDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+ GEIIGQLW
Sbjct: 82  WLVDVGAGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR V
Sbjct: 142 MAEFAVR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TLSTSGVVPMMDRLSRDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND+  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDSVEHARELLRVIAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|386333819|ref|YP_006029990.1| hypothetical protein RSPO_c02157 [Ralstonia solanacearum Po82]
 gi|334196269|gb|AEG69454.1| conserved hypothetical protein [Ralstonia solanacearum Po82]
          Length = 383

 Score =  422 bits (1085), Expect = e-115,   Method: Composition-based stats.
 Identities = 195/338 (57%), Positives = 256/338 (75%), Gaps = 7/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRAKQLQ+WIH+ G +DF +MTDL+ SLR+KL     I+AP ++SD +S DGTRK
Sbjct: 22  LGEKSFRAKQLQRWIHQSGAADFGEMTDLAKSLREKLATRATIQAPAVISDHLSSDGTRK 81

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV+IPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL  GEI+GQLW
Sbjct: 82  WLVDVGAGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLGTGEIVGQLW 141

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           + EF +R  K +    +  R ITN+VMMGMGEPLLNY + + A++L+L D+AYGLSRR V
Sbjct: 142 MAEFAMR--KQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRV 199

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++PM+D+L+++ PV LAVSLHASN+ LR+ LVP++KKYPL EL+ AC RY+ ++
Sbjct: 200 TLSTSGVVPMMDRLSRDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFA 259

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND+  HA EL+ ++        CK NLIPFN FP S L  S N +
Sbjct: 260 PRDFITFEYCMLDGVNDSVEHARELLRVIAD----VPCKFNLIPFNPFPESGLKRSNNEQ 315

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I+ F+++L+++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 316 IRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|238027072|ref|YP_002911303.1| histidyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876266|gb|ACR28599.1| Histidyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 446

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/356 (55%), Positives = 257/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+NL+YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDSLNGENLTMRPENTAAVVRASIEHNLLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++  D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQFADQ--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+  +        D+YIVH G+ A  +AF++ E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEQLVPE-QDGVDVYIVHQGEAAREQAFIIGERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A +A I+GE+E+ N T+ +K LR    D
Sbjct: 360  GLDVIFHCSADGASASFKSQMKRADASGAAYAVILGEDEVANGTVGVKALRGAGAD 415


>gi|339326394|ref|YP_004686087.1| histidyl-tRNA synthetase HisS [Cupriavidus necator N-1]
 gi|338166551|gb|AEI77606.1| histidyl-tRNA synthetase HisS [Cupriavidus necator N-1]
          Length = 456

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/353 (55%), Positives = 261/353 (73%), Gaps = 3/353 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 77   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHE 136

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPD+DAE+I+MC RLW +L L  + LELNS+G  +ER  
Sbjct: 137  RPQRGRYRQFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLVGVRLELNSLGQAHERAA 196

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y++  +D     +D K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++SL
Sbjct: 197  HREQLIKYLEGFQDI--LDDDSKRRLYTNPLRVLDTKNPALQEMAANAPKLIDFLGEESL 254

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI +
Sbjct: 255  AHFEGVQRLLKANNIPFKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIAQ 314

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+GIER+IELI++  +  + +  CD+Y+VH G+ A  +A + +E LR  
Sbjct: 315  MGGKSAPACGWAMGIERIIELIREEGVVPDAAG-CDVYLVHQGEAAAQQAMIAAERLRDA 373

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 1220
            GL V+L+   +    SFKSQMKRA+ S A +A IIGE+E+    + +K+LR +
Sbjct: 374  GLDVVLHASPDGKGGSFKSQMKRADTSGAAYAVIIGEDEVAAGVVQVKELRQR 426


>gi|167823868|ref|ZP_02455339.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226197114|ref|ZP_03792691.1| histidine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254198372|ref|ZP_04904794.1| histidyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169655113|gb|EDS87806.1| histidyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|225930493|gb|EEH26503.1| histidine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 446

 Score =  421 bits (1083), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/354 (54%), Positives = 260/354 (73%), Gaps = 7/354 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG++L+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFVDALNGESLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     +D +  LY N LRVLD+KN  ++EI+ NAP+L+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPQLIDFLGDVSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFDGLQRLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLR 1165
               K   A G+A+G+ER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR
Sbjct: 301  LGGKPTAACGWAMGVERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLR 357

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
              GL VIL+C  +    SFKSQMKRA+AS A FA I GE+E+ N T+ +K LR 
Sbjct: 358  DTGLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRG 411


>gi|307729247|ref|YP_003906471.1| radical SAM enzyme, Cfr family [Burkholderia sp. CCGE1003]
 gi|307583782|gb|ADN57180.1| radical SAM enzyme, Cfr family [Burkholderia sp. CCGE1003]
          Length = 383

 Score =  421 bits (1083), Expect = e-114,   Method: Composition-based stats.
 Identities = 196/344 (56%), Positives = 255/344 (74%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++  +DF+ MTDL+ SLR+KLK    I  P I+SD IS DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATISMPGIVSDHISADGTRK 83

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNLT GEIIGQL 
Sbjct: 84  WLIDVGNSNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLR 143

Query: 655 VTEFKLRRE------KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           + EF LR        +      +G+R +TN+VMMGMGEPLLNY + + A++L+L D+AYG
Sbjct: 144 MAEFALRASLGAAGGRATGGEGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V LSTSG++PM+D+L  + PV LAVSLHA ++ LR+ LVP++KKYPL+EL+ AC 
Sbjct: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQ 263

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+  +PR  ITFEYCML G+ND++  A EL++L R       CK NLIPFN FP S L+
Sbjct: 264 RYLKVAPRDFITFEYCMLDGVNDSEAQARELLALTRD----VPCKFNLIPFNPFPESGLV 319

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            S+  +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 RSRPEQIKRFAQVLVDAGVVTTVRKTRGDDIDAACGQLAGAVKD 363


>gi|170733171|ref|YP_001765118.1| histidyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|206560246|ref|YP_002231010.1| histidyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|421866983|ref|ZP_16298645.1| Histidyl-tRNA synthetase [Burkholderia cenocepacia H111]
 gi|444357826|ref|ZP_21159310.1| histidine--tRNA ligase [Burkholderia cenocepacia BC7]
 gi|444371764|ref|ZP_21171297.1| histidine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
 gi|229558659|sp|B1JT91.1|SYH_BURCC RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|229558660|sp|B4EAW8.1|SYH_BURCJ RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|169816413|gb|ACA90996.1| histidyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|198036287|emb|CAR52183.1| histidyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|358073147|emb|CCE49523.1| Histidyl-tRNA synthetase [Burkholderia cenocepacia H111]
 gi|443594663|gb|ELT63298.1| histidine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
 gi|443605516|gb|ELT73364.1| histidine--tRNA ligase [Burkholderia cenocepacia BC7]
          Length = 446

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/352 (55%), Positives = 257/352 (73%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++  D     ED K  LY N LRVLD+KN  +++I  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQFADV--LDEDAKRRLYTNPLRVLDTKNPALQDIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLAPE-QEGVDVYVVHQGETAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR 
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRG 411


>gi|167587051|ref|ZP_02379439.1| histidyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 446

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/356 (54%), Positives = 258/356 (72%), Gaps = 3/356 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D+     D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDA--LDADAQRRLYTNPLRVLDTKNPALQEIVQNAPKLIDFLGDHSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFDGLQRLLKANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+G+ER++EL+K+  +        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGVERILELLKEEQLMPE-QDGVDVYVVHQGEAAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL VI +C  +    SFKSQMKRA+AS A FA I GE EI N T+ +K LR   E+
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEIANGTVGVKALRGTGEE 415


>gi|107029010|ref|YP_626105.1| histidyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116689832|ref|YP_835455.1| histidyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123179919|sp|Q1BGX3.1|SYH_BURCA RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|166227947|sp|A0K7T5.1|SYH_BURCH RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|105898174|gb|ABF81132.1| histidyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116647921|gb|ABK08562.1| histidyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 446

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/352 (55%), Positives = 256/352 (72%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++  D     ED K  LY N LRVLD+KN  +++I  NAPKL+D+L  +S 
Sbjct: 183  HRVELIKYLEQFADV--LDEDAKRRLYTNPLRVLDTKNPALQDIAQNAPKLIDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G  A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLAPE-QEGVDVYVVHQGDTAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T+ +K LR 
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRG 411


>gi|113868337|ref|YP_726826.1| histidyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123032872|sp|Q0K963.1|SYH_CUPNH RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|113527113|emb|CAJ93458.1| Histidyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 456

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/353 (54%), Positives = 261/353 (73%), Gaps = 3/353 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 77   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHE 136

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPD+DAE+I+MC RLW +L L  + LELNS+G  +ER  
Sbjct: 137  RPQRGRYRQFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLVGVRLELNSLGQAHERAA 196

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y++  +D     +D K  LY N LRVLD+KN  ++E+  NAPKL+D+L ++SL
Sbjct: 197  HREQLIKYLEGFQDI--LDDDSKRRLYTNPLRVLDTKNPALQEMAANAPKLIDFLGEESL 254

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI +
Sbjct: 255  AHFEGVQRLLKANNIPFKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIAQ 314

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+GIER+IELI++  +  + +  CD+Y+VH G+ A  +A + +E LR  
Sbjct: 315  MGGKPAPACGWAMGIERIIELIREEGVVPDAAG-CDVYLVHQGEAAAQQAMIAAERLRDA 373

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 1220
            GL V+L+   +    SFKSQMKRA+ S A +A IIG++E+    + +K+LR +
Sbjct: 374  GLDVVLHASPDGKGGSFKSQMKRADTSGAAYAVIIGDDEVAAGVVQVKELRQR 426


>gi|194290005|ref|YP_002005912.1| histidyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|229558653|sp|B3R1K1.1|SYH_CUPTR RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|193223840|emb|CAQ69849.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
            [Cupriavidus taiwanensis LMG 19424]
          Length = 456

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/355 (54%), Positives = 263/355 (74%), Gaps = 3/355 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+ +R+ IE+NL+YDGPKRLWY+GPMFRHE
Sbjct: 77   GEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHE 136

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+GF GPD+DAE+I+MC RLW +L L  + LE+NS+G  +ER  
Sbjct: 137  RPQRGRYRQFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTGVRLEINSLGQADERAA 196

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y++  +D     +D K  LY N LRVLD+KN  ++++  NAPKL+D+L ++SL
Sbjct: 197  HREQLIKYLEGFQDI--LDDDSKRRLYTNPLRVLDTKNPALQDMAANAPKLIDFLGEESL 254

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NNI +KIN +LVRG+DYYN TVFEW TDKLG+Q +I GGGRYD LI +
Sbjct: 255  AHFEGVQRLLKANNIPFKINPRLVRGLDYYNLTVFEWITDKLGAQGTIAGGGRYDPLIAQ 314

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+GIER+IELI++  +  + +  CD+Y+VH G+ A  +A V +E LR  
Sbjct: 315  MGGKPAPACGWAMGIERIIELIREEGVVPD-AVGCDVYLVHQGEAAAQQAMVAAERLRDA 373

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 1222
            GL V+L+   +    SFKSQMKRA+AS A +A IIG++E+    + +K+LR + +
Sbjct: 374  GLDVVLHASPDGKGGSFKSQMKRADASGAAYAVIIGDDEVAAGVVQVKELRQREQ 428


>gi|145589471|ref|YP_001156068.1| histidyl-tRNA synthetase [Polynucleobacter necessarius subsp.
            asymbioticus QLW-P1DMWA-1]
 gi|145047877|gb|ABP34504.1| histidyl-tRNA synthetase [Polynucleobacter necessarius subsp.
            asymbioticus QLW-P1DMWA-1]
          Length = 442

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/355 (54%), Positives = 255/355 (71%), Gaps = 2/355 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+V+RSVIENNL+Y+GPKRLWY+GPMFRHE
Sbjct: 68   GEVTDIVEKEMYSFEDRLNGEQLTLRPEGTAAVVRSVIENNLLYEGPKRLWYTGPMFRHE 127

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q G+EA+GF GPDIDAE+I+M  RLW  L LK + LE+NS+G  NER +
Sbjct: 128  RPQRGRYRQFHQFGIEALGFAGPDIDAEIILMGQRLWDELGLKGVRLEINSLGQANERAE 187

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y +KH+      ED +  L  N LR+LDSKN  ++ ++  AP+LLD+L ++SL
Sbjct: 188  HRAALIKYFEKHQSQ--LDEDSRRRLLTNPLRILDSKNPEMQTLIDGAPQLLDFLGEESL 245

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q +L  NNI  KIN +LVRG+DYYN TVFEW T++LG+Q +I GGGRYD LI++
Sbjct: 246  KHFNAVQALLKANNIPCKINPRLVRGLDYYNLTVFEWVTEELGAQGTIAGGGRYDPLIER 305

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER++EL+K          QCDI+++H G E    A +++E LR+ 
Sbjct: 306  MGGKAAPACGWAMGMERVLELMKVSGSLPEAQAQCDIFVLHQGGETLTAAMIIAERLRSA 365

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 1222
            G+  IL C  +    SFKSQMK+A+AS A FA IIG +E+  N   +KDLR   E
Sbjct: 366  GIDTILFCPPDGQSASFKSQMKKADASGAAFAVIIGPDELAKNEAQLKDLRGTGE 420


>gi|326794518|ref|YP_004312338.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1]
 gi|326545282|gb|ADZ90502.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1]
          Length = 445

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/424 (46%), Positives = 299/424 (70%), Gaps = 7/424 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA+YPGLTRDR YG+G +G+  FI+IDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRLTKSRDALVADYPGLTRDRKYGDGKLGEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M  Q+ QAI E+D ++F+VDGR GL   D++I N LR+S +P  LV+NK
Sbjct: 61  TGD-EQGIDEKMASQSLQAIEEADAVLFLVDGRHGLNPADEMIANHLRRSSKPTYLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNIH 178
           ++ IN  I+L DFY +G+G+ + I+A +G G+++ ++  L    P+ ++  + ++   + 
Sbjct: 120 TDGINEDIALADFYSVGLGSLYPIAAAHGKGVRSLIDTALA---PFAEQVAEARDQIQLE 176

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           S + I++ +VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+   ++ ++K+Y LIDTA
Sbjct: 177 S-KGIRIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYQRHDKEYTLIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR    E +EKFS++KTL++I +ANVVI ++DA +++  QD+++  ++ ++GR L++
Sbjct: 236 GVRRRKHVKEAVEKFSIVKTLQAIQDANVVICVIDAHEDLVEQDLHMIGYVLDAGRGLVI 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +  ++R+ IK  ++++L F+ +A  ++ISA+    +    ++I   YDS    
Sbjct: 296 AINKWDGMQKDEREHIKKEVERRLGFVPYAKVHYISALHGTAVGDLYDTIEETYDSCYSK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
            ST+R+T+ L  A+  H P   K  R KLRYAHQGG NPP IV+HGN+   +   YKRYL
Sbjct: 356 WSTNRLTKILEDAVSEHQPPMVKGRRIKLRYAHQGGSNPPRIVVHGNQTDALPGSYKRYL 415

Query: 419 EKYF 422
           E  F
Sbjct: 416 ENKF 419


>gi|171463403|ref|YP_001797516.1| histidyl-tRNA synthetase [Polynucleobacter necessarius subsp.
            necessarius STIR1]
 gi|171192941|gb|ACB43902.1| histidyl-tRNA synthetase [Polynucleobacter necessarius subsp.
            necessarius STIR1]
          Length = 442

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/368 (54%), Positives = 259/368 (70%), Gaps = 7/368 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG  L+LRPEGTA+++RSVIENNL+Y+GPKRLWY+GPMFRHE
Sbjct: 68   GEVTDIVEKEMYSFEDRLNGKQLALRPEGTAALVRSVIENNLLYEGPKRLWYTGPMFRHE 127

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q G+EA+GF GPDIDAE+I+M  RLW  L LK + LE+NS+G   ER +
Sbjct: 128  RPQRGRYRQFHQFGIEALGFAGPDIDAEIILMGQRLWDELGLKGVRLEINSLGQAPERAE 187

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   L+ Y +KH+D     ED K  L  N LR+LDSKN  ++ ++  APKLLDYL ++SL
Sbjct: 188  HRAALVIYFEKHQDQ--LDEDSKRRLLSNPLRILDSKNPEMQALIEGAPKLLDYLGEESL 245

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q +L  NNI  KIN +LVRG+DYYN TVFEW TD+LG+Q +I GGGRYD LI++
Sbjct: 246  KHFNAVQALLKANNIPCKINPRLVRGLDYYNLTVFEWVTDELGAQGTIAGGGRYDPLIER 305

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER++EL+K          QCDI+++H G E    A +++E LR+ 
Sbjct: 306  MGGKAAPACGWAMGMERVLELMKVSGSLPETRAQCDIFVLHQGGETLTAAMIIAERLRSA 365

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            G+  IL C  +    SFKSQMK+A++S A FA IIG +E+  N   +KDLR      T +
Sbjct: 366  GIDTILFCPPDGQSASFKSQMKKADSSGAAFAVIIGPDELAKNEAQLKDLRG-----TGE 420

Query: 1228 QISISFKD 1235
            Q S+   D
Sbjct: 421  QKSVPLDD 428


>gi|375106257|ref|ZP_09752518.1| ribosome-associated GTPase EngA [Burkholderiales bacterium
           JOSHI_001]
 gi|374666988|gb|EHR71773.1| ribosome-associated GTPase EngA [Burkholderiales bacterium
           JOSHI_001]
          Length = 447

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/430 (48%), Positives = 303/430 (70%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPVL LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+  +G   FI+IDTGGF
Sbjct: 1   MKPVLALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGDAKLGGHEFIVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EPE   GI+ EM +QT+QA+ E+D+++F+VD R GL  QD  I  +LR   + ++L +NK
Sbjct: 61  EPENPTGIVKEMARQTRQAVAEADVVVFVVDARAGLSAQDHDIARYLRSVNKRVLLAVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E +  S  + +F+ELGIG+P+ +SA +G GI++  +  L +        + +E     +
Sbjct: 121 AEGMLESPQVAEFHELGIGDPNPVSAAHGQGIRSLADAALEL---LNLPDEPEEEVEEAA 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I++A+ G+PNVGKSTLIN+ LGE R+I +D PGTTRD+I   FE N K++ LIDTAG
Sbjct: 178 DKPIRLAVAGRPNVGKSTLINAWLGEERLIAFDMPGTTRDAIHVPFERNGKRFELIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K FE IEKFSV+KTL++I +ANVV+L++DA Q +S QD +IA +I ESGR++++ 
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIADANVVVLMVDATQGVSEQDAHIAGYILESGRAVVIA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD++   QR++   ++++++ FL FA    ISAIK   +    ++I+  + S+   +
Sbjct: 298 VNKWDAVDAYQREMFNRSLEQRMAFLRFADVLHISAIKRAGLAPLWKAISAAHASATCKM 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T  +TR +  A+++  P R  + RPKLRYAHQGG NPPI+V+HGN L++I + YKR+LE
Sbjct: 358 PTPVLTRLVQEAVEHQAPRRAGMFRPKLRYAHQGGMNPPIVVVHGNALEHITDTYKRFLE 417

Query: 420 KYFYRTFSLI 429
                 F L+
Sbjct: 418 GRIRDHFKLV 427


>gi|292492503|ref|YP_003527942.1| small GTP-binding protein [Nitrosococcus halophilus Nc4]
 gi|291581098|gb|ADE15555.1| small GTP-binding protein [Nitrosococcus halophilus Nc4]
          Length = 464

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/430 (47%), Positives = 298/430 (69%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MK ++ LVGRPNVGKSTLFNRLT SRDALVA+ PG+TRDR YG    G++SF+++DTGG 
Sbjct: 1   MKALVALVGRPNVGKSTLFNRLTRSRDALVADQPGVTRDRKYGIARYGEQSFLVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E + G+   M  Q + AI E+DII+F+VDGR+GL   D+ I   LR++ +P+ LVINK
Sbjct: 61  T-EQESGVGELMRVQAQLAIEEADIILFLVDGREGLSALDETIAEQLRRAQKPLKLVINK 119

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E  +   ++ +FY LG+G P  ISA  G G+   L+++ T+ LP     + KE   I +
Sbjct: 120 TEGRDQELVASEFYRLGLGEPATISAQQGQGVGGLLQDLSTL-LP----LEGKEEAGIQA 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              ++ A+VG+PNVGKSTL+N LLGE RV++++ PGTTRDSI   F +  + Y L+DTAG
Sbjct: 175 -RGLQFAVVGRPNVGKSTLVNRLLGEERVLSFEAPGTTRDSIAIPFCHQGQDYTLVDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR+K  +++EKFS+ KTL++I  A VVIL++DA++ +  QD+++A  I ESG+++++ 
Sbjct: 234 IRRRSKILDMLEKFSIAKTLEAIEAAQVVILVIDAREGVVEQDLHLAGLILESGKAVVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  +QR+ +K ++ ++L FL FA  +FISA+  + +     SI+  Y S+  HL
Sbjct: 294 VNKWDGLSSDQRRKVKADLDRRLPFLDFARVHFISALHGSGVGELFPSIDKAYRSANCHL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T+ + +AL +A++ HPP   K  R KLRYAHQGG NPP I+IHG++ + +  +YKRYL 
Sbjct: 354 PTAELNQALAAAVEKHPPPVVKGRRIKLRYAHQGGHNPPKIIIHGSQAEAVPVNYKRYLI 413

Query: 420 KYFYRTFSLI 429
            YF   F+L+
Sbjct: 414 NYFRTAFALV 423


>gi|254252258|ref|ZP_04945576.1| Histidyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894867|gb|EAY68747.1| Histidyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 446

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/352 (54%), Positives = 254/352 (72%), Gaps = 3/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFR E
Sbjct: 63   GEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRLE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RP  GRYRQF+Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER  
Sbjct: 123  RPHRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            + ++LI Y+++H D     ED K  LY N LRVLD+KN  ++EI  NAPKL+D+L   S 
Sbjct: 183  HRVELIKYLEQHVDV--LDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDQSR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L  NN+ +KIN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++
Sbjct: 241  AHFEGLQRLLLANNVPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K   A G+A+GIER++EL+K+ ++        D+Y+VH G+ A  +AF+ +E LR  
Sbjct: 301  LGGKPTAACGWAMGIERILELLKEEDLAPE-QEGVDVYVVHQGEAAREQAFIAAERLRDT 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VI +C  +    SFKSQMKRA+AS A FA I GE E+ N T  +K LR 
Sbjct: 360  GLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTAGVKALRG 411


>gi|254492694|ref|ZP_05105865.1| putative GTPase [Methylophaga thiooxidans DMS010]
 gi|224462215|gb|EEF78493.1| putative GTPase [Methylophaga thiooxydans DMS010]
          Length = 468

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/430 (48%), Positives = 287/430 (66%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKST+FNRLT SRDALVA+Y GLTRDR YG        FI+IDTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTIFNRLTRSRDALVADYAGLTRDRIYGTVREENLDFILIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             +    +   M KQ K AI E+D+++FIVDGR GL+  D  +   LR  G+P+ LVINK
Sbjct: 61  TDQTDN-MSDLMRKQAKLAIDEADLVLFIVDGRAGLMPSDTDVAQQLRSDGKPVRLVINK 119

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK-FFKKKEFTNIH 178
           +E      ++ DFY LG+G P +ISA  G G    LE I  + LP  +  F++++     
Sbjct: 120 TEGEQREMVAADFYSLGLGEPQVISATQGRGFTELLEEI-KVCLPQAEVLFEEEDEATDD 178

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             + I++A++G+PNVGKSTLIN LLGE RV+ +D PGTTRDSI   FE +   Y LIDTA
Sbjct: 179 RPDDIRLAVLGRPNVGKSTLINRLLGEERVVAFDEPGTTRDSIHIPFEKDGVNYTLIDTA 238

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR+K  E +EKFSV+KTL+++ +ANV +L+LDA + I  QD+++A  I ESGR++++
Sbjct: 239 GVRRRSKVSEKLEKFSVLKTLQALEDANVALLVLDAHEGIVEQDLHLAGLILESGRAVVL 298

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  ++R+ +  NI+++L F++FA  +FISA+  + +   ++++   Y S++  
Sbjct: 299 AVNKWDGLEKSEREWVATNIERRLPFMNFAKTHFISALHGSGVGLLLKTVRQAYQSAMTK 358

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + TSR+TR L  A+ +H P   +  R K RYAH GGKNPP I+IHGN+     N YKRYL
Sbjct: 359 VPTSRLTRVLEDAVSDHQPPLVRGRRIKFRYAHLGGKNPPRIIIHGNQTDATPNSYKRYL 418

Query: 419 EKYFYRTFSL 428
           E YF     L
Sbjct: 419 ENYFRDVLKL 428


>gi|390951008|ref|YP_006414767.1| ribosome-associated GTPase EngA [Thiocystis violascens DSM 198]
 gi|390427577|gb|AFL74642.1| ribosome-associated GTPase EngA [Thiocystis violascens DSM 198]
          Length = 465

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/430 (47%), Positives = 289/430 (67%), Gaps = 7/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ L+GRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G IG K ++I+DTGG 
Sbjct: 1   MLPVITLIGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGVGQIGPKPYVIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                +G+   M +Q  +AI E+D ++F+VD R G   +D  I+  LR+ G+PI LV+NK
Sbjct: 61  G-TAPEGVEALMERQVLRAIDEADHLLFMVDARDGCSPEDIEISQRLRRLGKPITLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           S++ + + +  DF+ LG+G+P  +S+  GNG++  ++ +   +LP  +     E T    
Sbjct: 120 SDSTDPTFATADFHRLGLGDPWPVSSTQGNGVRELIDRVFE-QLPEAEGSIDGEDTQ--- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            E I+VA+VG+PN GKSTLIN LLGE R++T+D PGTTRDSI   FE   + Y LIDTAG
Sbjct: 176 -EGIRVAVVGRPNAGKSTLINRLLGEERLVTFDLPGTTRDSIFIPFERLGRHYTLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  E IEKFSVIKTL++I  ANV+IL++DA Q I  QD  +A  I ESGR+L+V 
Sbjct: 235 LRRRARVHEAIEKFSVIKTLQAIAAANVIILVIDAHQGIGEQDATLAGHIIESGRALVVA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  +QR+ +K+  ++KL FL FA  + ISA+  + +   ++ + H Y ++   L
Sbjct: 295 INKWDGLDTDQREQVKSQFQRKLAFLDFAKLHLISALHGSGVGLLLDEVEHAYANATRDL 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T  +TR L +A++ H P      R KLRYAHQGG+NPPIIVIHGN+ + +   Y+RYL 
Sbjct: 355 GTPVLTRLLEAAVQEHQPPIVHGRRIKLRYAHQGGRNPPIIVIHGNQTEAVPETYRRYLI 414

Query: 420 KYFYRTFSLI 429
             F +   L+
Sbjct: 415 NRFRKELKLL 424


>gi|456063408|ref|YP_007502378.1| Histidyl-tRNA synthetase [beta proteobacterium CB]
 gi|455440705|gb|AGG33643.1| Histidyl-tRNA synthetase [beta proteobacterium CB]
          Length = 439

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/352 (54%), Positives = 255/352 (72%), Gaps = 2/352 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+V+RSV+ENNL+Y+GPKRLWY+GPMFRHE
Sbjct: 65   GEVTDIVEKEMYSFEDRLNGEQLTLRPEGTAAVVRSVVENNLLYEGPKRLWYTGPMFRHE 124

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q G+EA+GF GPDIDAE+I+M  RLW  L LK + LE+NS+G   ER +
Sbjct: 125  RPQRGRYRQFHQFGIEAMGFAGPDIDAEIILMGQRLWDELGLKGVRLEINSLGQAPERAE 184

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   L+ Y +K+K+     ED +  L  N LR+LDSKN  +++++  APKLLD+L ++SL
Sbjct: 185  HRAALVTYFEKNKEQ--LDEDSQRRLLTNPLRILDSKNPAMQDLIEGAPKLLDFLGEESL 242

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q +L  NNI  KIN +LVRG+DYYN TVFEW T++LG+Q +I GGGRYD LI++
Sbjct: 243  KHFEAVQALLKANNIPCKINPRLVRGLDYYNLTVFEWITEELGAQGTIAGGGRYDPLIER 302

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER++EL+K          QCD +++H G E    A +++E LR  
Sbjct: 303  MGGKAAPACGWAMGMERVLELMKVSGSLPEPQAQCDAFVIHQGGETLTAAMIIAERLRNA 362

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            G+ VIL C  +    SFKSQMK+A+AS A +A IIG +E+  N   +KDLR+
Sbjct: 363  GIDVILFCPPDGQSASFKSQMKKADASGAAYAVIIGPDELAQNEAQLKDLRS 414


>gi|387127022|ref|YP_006295627.1| GTP-binding protein EngA [Methylophaga sp. JAM1]
 gi|386274084|gb|AFI83982.1| GTP-binding protein EngA [Methylophaga sp. JAM1]
          Length = 469

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/431 (48%), Positives = 292/431 (67%), Gaps = 6/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +R+ALVA++ GLTRDR YG     +  FI+IDTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTKTRNALVADHAGLTRDRIYGNARHDEAEFILIDTGGL 60

Query: 61  EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
              V+   M + M KQ + AI+E+D+I+F+VDG+ G+V  D+LI   LR  G+P++LVIN
Sbjct: 61  T--VQGDDMSDLMRKQAELAIVEADLILFVVDGKTGVVPADELIAKQLRNVGKPVLLVIN 118

Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K+E+    ++  DFY LG+G P +ISA  G GI N + N L  +LP  +  +  E     
Sbjct: 119 KTESEQKELAAADFYRLGLGEPEVISATQGRGISNLM-NTLMRDLPAIRIVETDEEEAEE 177

Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                I +A+VG+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE +   YILIDT
Sbjct: 178 DTSGDICLAVVGRPNVGKSTLVNRLLGEDRVVAFDEPGTTRDSIYIPFEKDGTNYILIDT 237

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR+K  E +EKFS++KTL++I  ANVV+L+LDA Q +  QD+++A  I ESGR+++
Sbjct: 238 AGVRRRSKVSEALEKFSIVKTLQAIEAANVVLLVLDAHQGVVDQDLHLAGLIIESGRAVV 297

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + VNKWD +   +R+ +  NI+++L FLSFA  +FISA+  + +   ++S+   Y S++ 
Sbjct: 298 IAVNKWDGLEKQEREWVATNIERRLPFLSFAKTHFISALHGSGVGLLLKSVKRAYGSALA 357

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            + T ++TR L  A+ +H P      R K RYAH GGKNPP I+IHGN+ +   N Y+RY
Sbjct: 358 KIPTPQLTRVLEEAVADHQPPLVNGRRIKYRYAHLGGKNPPRIIIHGNQTEATPNSYRRY 417

Query: 418 LEKYFYRTFSL 428
           LE YF     L
Sbjct: 418 LENYFRTALKL 428


>gi|345863296|ref|ZP_08815508.1| GTP-binding protein EngA [endosymbiont of Tevnia jerichonana (vent
           Tica)]
 gi|345125757|gb|EGW55625.1| GTP-binding protein EngA [endosymbiont of Tevnia jerichonana (vent
           Tica)]
          Length = 461

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/433 (46%), Positives = 289/433 (66%), Gaps = 19/433 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDR YG G +G   ++++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRKYGMGRLGPGPYVVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E   G+   M +Q +QAI E+D ++ ++D R+G    D +I   LR++G+P+  V+NK
Sbjct: 61  SGE--DGVDLLMEQQVRQAIGEADHVLLLLDAREGCTGGDAIIAEQLRRTGKPVTAVVNK 118

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNF----LENILTIELPYKKFFKKKEFT 175
           SE ++   +  +F+ LG+G P  I+A +G G+       LE++  +E+P       +E  
Sbjct: 119 SEGLSRDAAANEFFSLGLGEPKAIAAAHGQGVHGLIVEVLESLPPVEMP-------EELP 171

Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
                E I++A+VG+PNVGKSTL+N +LGE RV+ +D PGTTRDSI   F +++K Y LI
Sbjct: 172 -----EGIQIAVVGRPNVGKSTLVNRMLGEERVVAFDQPGTTRDSIFIPFVHDDKHYTLI 226

Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
           DTAG+RRR +  EVIEKFSVIKTL+++ +ANV +L+LDAQQ +  QD N+A  I ESGR+
Sbjct: 227 DTAGVRRRARVNEVIEKFSVIKTLQALEQANVALLVLDAQQGVGEQDANLAGHILESGRA 286

Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
           L++ +NKWD +   QR+ ++  I++KL FL FA  ++ISA+  + +      ++  Y ++
Sbjct: 287 LVLVINKWDGLDQGQRQQVREEIERKLPFLDFATHHYISALHGSGVGDLYRLVDRAYANA 346

Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
              L+T  +TR L   ++ H P   +  R KLRYAHQGGKNPPIIVIHGN+ +++ + Y+
Sbjct: 347 TRDLATPELTRLLELLVQEHQPPLVRGRRIKLRYAHQGGKNPPIIVIHGNQTEHVPSTYR 406

Query: 416 RYLEKYFYRTFSL 428
           RYL   F R   L
Sbjct: 407 RYLVGRFRRALKL 419


>gi|335043517|ref|ZP_08536544.1| putative GTPase [Methylophaga aminisulfidivorans MP]
 gi|333790131|gb|EGL56013.1| putative GTPase [Methylophaga aminisulfidivorans MP]
          Length = 468

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/429 (49%), Positives = 286/429 (66%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKST+FNRLT SRDALVA+Y GLTRDR YG+       FI+IDTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTIFNRLTRSRDALVADYAGLTRDRIYGKVKEPGFDFILIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             +    +   M KQ K AI E+D+I+FIVDGR GL+  D  +   LR  G+P+ LVINK
Sbjct: 61  TDQTDN-MSDLMRKQAKLAIDEADLILFIVDGRAGLMPTDSDVAQQLRNDGKPVCLVINK 119

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E     I S +FY LG+G P +ISA  G GI + L  I    +P  +  +  E   +  
Sbjct: 120 TEGERREIISAEFYALGLGEPQVISATQGRGIDSLLAEIKQ-RIPAVEKIEADE-AEVFD 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++A++G+PNVGKSTLIN LLGE RV+ +D PGTTRDSI   FE +   Y LIDTAG
Sbjct: 178 ENEIRLAVLGRPNVGKSTLINRLLGEERVVAFDEPGTTRDSIHIPFEKDGVNYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR+K  E +EKFSV+KTL+++ +ANVV+L+LDA + I  QD+++A  I ESGR++++ 
Sbjct: 238 VRRRSKVSEKLEKFSVLKTLQALEDANVVMLVLDAHEGIVEQDLHLAGLIVESGRAVVIA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  ++R+ +  NI+++L FL+FA  +FISA+  + +    +S+   + S++  +
Sbjct: 298 VNKWDGLEKSEREWVTTNIERRLPFLNFAKTHFISALHGSGVGLLFKSVRQAFQSAMTKV 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            TSR+TR L  AI +HPP   +  R K RYAH GGKNPP I+IHGN+ +   N YKRYLE
Sbjct: 358 PTSRLTRVLEDAIADHPPPLVRGRRIKFRYAHLGGKNPPRIIIHGNQTESTPNSYKRYLE 417

Query: 420 KYFYRTFSL 428
             F     L
Sbjct: 418 NTFREALKL 426


>gi|145589473|ref|YP_001156070.1| radical SAM protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|205829801|sp|A4SYE2.1|RLMN_POLSQ RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|145047879|gb|ABP34506.1| 23S rRNA m(2)A-2503 methyltransferase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 402

 Score =  413 bits (1061), Expect = e-112,   Method: Composition-based stats.
 Identities = 198/350 (56%), Positives = 253/350 (72%), Gaps = 14/350 (4%)

Query: 533 VHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDG 592
           V  L E PFRAKQL +WIH+ GVSD N M+DL+ S R  L + V + +  ++ D+ + DG
Sbjct: 20  VAGLNEKPFRAKQLMQWIHQRGVSDINDMSDLAKSFRATLLDKVEVLSLPVIKDEHATDG 79

Query: 593 TRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIG 651
           TRKW+  V   N +E+VFIPE +R TLCIS+Q GCA+NC FCSTGRQGF RNLT GEIIG
Sbjct: 80  TRKWLLDVGAGNAVESVFIPEDDRGTLCISSQAGCAVNCRFCSTGRQGFSRNLTSGEIIG 139

Query: 652 QLWVTEFKLRREKNI-----KINSQG----KRQITNIVMMGMGEPLLNYKSTIGALKLIL 702
           QLW  E  LR +        K  + G     R I+N+VMMGMGEPLLNY + + AL+L+L
Sbjct: 140 QLWFAEHLLRNDPEAIRRIEKYPTPGWEHTGRVISNVVMMGMGEPLLNYDNVVSALRLML 199

Query: 703 SDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKE 762
            D AYGLSRR V +STSG++PMID+LAQ+CPV LAVSLHA N+ LR++LVP+++KYPL+E
Sbjct: 200 DDRAYGLSRRRVTVSTSGVVPMIDRLAQDCPVALAVSLHAPNDALRDQLVPLNQKYPLRE 259

Query: 763 LILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCF 822
           L+ AC RY+ ++PR  +TFEYCML G+ND+DI A EL+ L+R  K    CKINLIPFN F
Sbjct: 260 LLDACERYLPFAPRDFLTFEYCMLDGVNDSDIQAKELVRLLRNIK----CKINLIPFNPF 315

Query: 823 PNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           P S L  S   R+  FA IL+++G+  T+RK RG+DI AACGQL+G+  D
Sbjct: 316 PESGLKRSSAQRVNAFAGILLDAGMVATVRKTRGDDIAAACGQLAGDVVD 365


>gi|304414053|ref|ZP_07395421.1| GTP-binding protein [Candidatus Regiella insecticola LSR1]
 gi|304283267|gb|EFL91663.1| GTP-binding protein [Candidatus Regiella insecticola LSR1]
          Length = 491

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/452 (46%), Positives = 295/452 (65%), Gaps = 24/452 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN LT +R ALV+++PGLTRDR YG        FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNHLTRTRSALVSDFPGLTRDRQYGRAEFESHEFIVIDTGGV 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M  Q   AI E+DI++FIVDGR G++  D+ IT  LR   +   L++NK
Sbjct: 61  D-GTEQGVETLMASQALLAIEEADIVLFIVDGRAGMLPADQEITQHLRNRQKSTFLLVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
           ++ INS  ++ DFY LG+G  + I+A +G G+   LE ++   +P K+            
Sbjct: 120 TDGINSDSAIADFYSLGLGEVYAIAASHGRGVAQLLERVMAPFIPAKEPVVLTDEQLNAA 179

Query: 170 ------KKKEFTNIHSIEY------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
                 +K + T +    +      IK+AIVG+PNVGKSTL N +LGE RVI YD PGTT
Sbjct: 180 YWATQEEKNDETGLEEDNFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVIVYDLPGTT 239

Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
           RDSI      N ++YILIDTAG+R+R K  + +EKFSVIKTLK+I ++NVV+L++DAQ  
Sbjct: 240 RDSIYIPMTRNERQYILIDTAGVRKRGKVTQTVEKFSVIKTLKAIEDSNVVLLVIDAQDG 299

Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
           IS QD+++  FI  SGRSL++ +NKWD I    R+ +KN +  +LNF+ FA  +FISA++
Sbjct: 300 ISDQDLSLLGFILNSGRSLVIVINKWDGIQAEDRQRVKNELDLRLNFIDFARIHFISALR 359

Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
           ++ + +  +S+   YDSS   ++TS +TR +  A + HPP R +  R KL+YAH GG NP
Sbjct: 360 VSGVGNLFKSVCEAYDSSTKRVNTSLLTRIMQMAEEEHPPARIQGRRVKLKYAHAGGYNP 419

Query: 398 PIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           PIIVIHGN++  + + YKRYL  YF R+  +I
Sbjct: 420 PIIVIHGNQVSSLTDAYKRYLMNYFRRSLKII 451


>gi|89095338|ref|ZP_01168256.1| GTP-binding protein EngA [Neptuniibacter caesariensis]
 gi|89080413|gb|EAR59667.1| GTP-binding protein EngA [Oceanospirillum sp. MED92]
          Length = 479

 Score =  411 bits (1057), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/426 (46%), Positives = 299/426 (70%), Gaps = 9/426 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG--KKSFIIIDTG 58
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDR YGEG +   ++ +I++DTG
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRKYGEGRLANEEQDYIVVDTG 60

Query: 59  GFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
           G   + ++GI +EM KQ+ QA+ E+D+++FIVDGR G+   D++I N+LR+S +P  LV+
Sbjct: 61  GITGD-EQGIDYEMAKQSLQAVDEADVVLFIVDGRAGINPADEMIANYLRRSEKPFYLVV 119

Query: 119 NKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
           NK++ +N  I + DFYELG G P  I+A +G G+   +E +L      ++  ++     +
Sbjct: 120 NKTDGLNPDIVVADFYELGFGQPFPIAASHGRGVTQLIEMVLEELPEPEEESQE----TM 175

Query: 178 HSIE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
             +E  IK+A+VG+PNVGKSTL+N +LGE+RV+ +D  GTTRDS+   +  ++K Y LID
Sbjct: 176 DEVEKSIKIAVVGRPNVGKSTLVNRMLGEDRVVVFDKAGTTRDSVYIPYVRDDKNYTLID 235

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+RRR    E  EKFS++KTL+++ +A+VV+ ++DA++ ++ QD+++ +F+ ++GRSL
Sbjct: 236 TAGVRRRKNITEAAEKFSIVKTLQAVNDAHVVVFVIDAREGVTEQDMHMLSFVIDTGRSL 295

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           ++ +NKWD +   ++  +K  +++KL F  FA  +FISA+  +N+ +  +S++  Y+ ++
Sbjct: 296 VIALNKWDGMNGEEKARVKEQVERKLEFAEFADMHFISALHGSNVGNMYDSVDEAYEYAM 355

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
              STS++TR L   + +H P   K  R KLRYAHQGG NPPIIV+HGN+   +   YKR
Sbjct: 356 AKWSTSKLTRLLEDVVADHQPPMVKGRRIKLRYAHQGGSNPPIIVVHGNQTNALPGSYKR 415

Query: 417 YLEKYF 422
           YLE  F
Sbjct: 416 YLENKF 421


>gi|187478836|ref|YP_786860.1| hypothetical protein BAV2346 [Bordetella avium 197N]
 gi|123725044|sp|Q2KY87.1|RLMN_BORA1 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|115423422|emb|CAJ49956.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 382

 Score =  411 bits (1056), Expect = e-111,   Method: Composition-based stats.
 Identities = 196/347 (56%), Positives = 250/347 (72%), Gaps = 9/347 (2%)

Query: 531 NIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISF 590
           ++V + G  PFRA+QLQ+W+H+  V  F+ MTDL+   R +L     I+A  +  +Q S 
Sbjct: 19  DLVGQWGGKPFRARQLQRWVHQRSVDSFDAMTDLARDFRAQLSERAIIEALPVNIEQRSS 78

Query: 591 DGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEI 649
           DGTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EI
Sbjct: 79  DGTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLRTSEI 138

Query: 650 IGQLW----VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           IGQLW    V E  +   +     ++  R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 139 IGQLWWAKRVLEADIGSARLANAGAEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 198

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
            YGLSRR V +STSG++PM+D+LAQ+CPV LAVSLHA N+ LR+ LVP++KKYPLKEL+ 
Sbjct: 199 GYGLSRRRVTVSTSGVVPMMDRLAQDCPVALAVSLHAPNDALRDDLVPLNKKYPLKELLA 258

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ +    CK+NLIPFN FP S
Sbjct: 259 ACERYLAHAPRDFITFEYCMLDGINDTDQHAKELIQLARQVR----CKLNLIPFNPFPAS 314

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S   R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 315 GLKRSAAPRVKVFAQRLMDAGIITTVRKTRGDDIDAACGQLAGEVKD 361


>gi|293604539|ref|ZP_06686944.1| cfr family radical SAM enzyme [Achromobacter piechaudii ATCC 43553]
 gi|292817120|gb|EFF76196.1| cfr family radical SAM enzyme [Achromobacter piechaudii ATCC 43553]
          Length = 384

 Score =  411 bits (1056), Expect = e-111,   Method: Composition-based stats.
 Identities = 196/348 (56%), Positives = 257/348 (73%), Gaps = 12/348 (3%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L ++  I+A  +  +Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWMHQRGADSFDAMTDLAREFRSQLASNCRIEALPVNIEQRSAD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLKTSEII 139

Query: 651 GQLWVTEFKLR------REKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSD 704
           GQLW  +  L       R ++ K  ++  R I+N+VMMGMGEPLLNY   + AL+L+L D
Sbjct: 140 GQLWWAKRVLEADIGTARLESAKA-TEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDD 198

Query: 705 HAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELI 764
           +AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPLKEL+
Sbjct: 199 NAYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLKELL 258

Query: 765 LACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPN 824
            AC RY+ ++PR  ITFEYCML GINDTD HA ELI + R+ +    CK+NLIPFN FP 
Sbjct: 259 AACERYLAFAPRDFITFEYCMLDGINDTDQHAKELIQIARQLR----CKLNLIPFNPFPE 314

Query: 825 SNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           S L  S ++R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 315 SGLKRSNSARVKVFAQRLMDAGIITTVRKTRGDDIDAACGQLAGEVRD 362


>gi|423016749|ref|ZP_17007470.1| ribosomal RNA large subunit methyltransferase N [Achromobacter
           xylosoxidans AXX-A]
 gi|338780177|gb|EGP44592.1| ribosomal RNA large subunit methyltransferase N [Achromobacter
           xylosoxidans AXX-A]
          Length = 384

 Score =  410 bits (1054), Expect = e-111,   Method: Composition-based stats.
 Identities = 195/347 (56%), Positives = 256/347 (73%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L +   I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWMHQRGADSFDAMTDLARDFRGQLASRCVIEALAVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLKTSEII 139

Query: 651 GQLWVTEFKLRRE-KNIKINS----QGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L  +    ++ S    +  R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEADIGTARLESARATEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPLKEL+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLKELLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI++ R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAFAPRDFITFEYCMLDGINDTDQHARELINIARQIR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S  +R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPTARVKVFAQRLMDAGIITTVRKTRGDDIDAACGQLAGEVRD 362


>gi|452126159|ref|ZP_21938742.1| radical SAM superfamily protein 2 [Bordetella holmesii F627]
 gi|452129527|ref|ZP_21942102.1| radical SAM superfamily protein 2 [Bordetella holmesii H558]
 gi|451921254|gb|EMD71399.1| radical SAM superfamily protein 2 [Bordetella holmesii F627]
 gi|451923162|gb|EMD73304.1| radical SAM superfamily protein 2 [Bordetella holmesii H558]
          Length = 382

 Score =  410 bits (1054), Expect = e-111,   Method: Composition-based stats.
 Identities = 199/364 (54%), Positives = 258/364 (70%), Gaps = 18/364 (4%)

Query: 523 DFAESID---------KNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLK 573
           D AESI+          ++V + G  PFRA+QLQ+WIH+ GV  F+ M+DL+   R +L 
Sbjct: 2   DNAESINLLGMDAKALADLVGQWGGKPFRARQLQRWIHQRGVDSFDAMSDLARDFRAQLT 61

Query: 574 NSVYIKAPHIMSDQISFDGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIF 632
               I+A  +  +Q S DGTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC F
Sbjct: 62  ERCVIEALPVNIEQRSADGTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRF 121

Query: 633 CSTGRQGFVRNLTVGEIIGQLW----VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPL 688
           CSTG QGF RNL   EIIGQLW    V E  +   +  + + +  R I+N+VMMGMGEPL
Sbjct: 122 CSTGHQGFNRNLKTSEIIGQLWWAKRVLEADVGSARLAQASGEDTRVISNVVMMGMGEPL 181

Query: 689 LNYKSTIGALKLILSDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLR 748
           LNY   + AL+++L D+ YGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR
Sbjct: 182 LNYDQVLPALRMMLDDNGYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALR 241

Query: 749 NKLVPISKKYPLKELILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKI 808
           + LVP++KKYPLKEL+ AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ + 
Sbjct: 242 DDLVPLNKKYPLKELLAACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVR- 300

Query: 809 LTSCKINLIPFNCFPNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSG 868
              CK+NLIPFN FP S L  S   R+++FA+ LM++GI  T+RK RG+DI+AACGQL+G
Sbjct: 301 ---CKLNLIPFNPFPASGLKRSPAPRVRVFAQRLMDAGIITTVRKTRGDDIDAACGQLAG 357

Query: 869 EETD 872
           E  D
Sbjct: 358 EVKD 361


>gi|359798970|ref|ZP_09301539.1| ribosomal RNA large subunit methyltransferase N [Achromobacter
           arsenitoxydans SY8]
 gi|359363108|gb|EHK64836.1| ribosomal RNA large subunit methyltransferase N [Achromobacter
           arsenitoxydans SY8]
          Length = 384

 Score =  410 bits (1054), Expect = e-111,   Method: Composition-based stats.
 Identities = 195/348 (56%), Positives = 255/348 (73%), Gaps = 10/348 (2%)

Query: 531 NIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISF 590
           ++V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  +  +Q S 
Sbjct: 19  DLVGQWGGKPFRARQLQRWMHQRGADSFDAMTDLAREFRSQLATHCRIEALPVNIEQRST 78

Query: 591 DGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEI 649
           DGTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EI
Sbjct: 79  DGTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLKTSEI 138

Query: 650 IGQLWVTEFKLRRE-KNIKINS----QGKRQITNIVMMGMGEPLLNYKSTIGALKLILSD 704
           IGQLW  +  L  +    ++ S    +  R I+N+VMMGMGEPLLNY   + AL+L+L D
Sbjct: 139 IGQLWWAKRVLEADIGTARLESARATEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDD 198

Query: 705 HAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELI 764
           +AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPLKEL+
Sbjct: 199 NAYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLKELL 258

Query: 765 LACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPN 824
            AC RY+ ++PR  ITFEYCML GINDTD HA ELI + R+ +    CK+NLIPFN FP 
Sbjct: 259 AACERYLAFAPRDFITFEYCMLDGINDTDQHAKELIQIARQLR----CKLNLIPFNPFPE 314

Query: 825 SNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           S L  S ++R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 315 SGLKRSNSARVKVFAQRLMDAGIITTVRKTRGDDIDAACGQLAGEVRD 362


>gi|421482988|ref|ZP_15930567.1| radical SAM superfamily protein 2 [Achromobacter piechaudii HLE]
 gi|400198792|gb|EJO31749.1| radical SAM superfamily protein 2 [Achromobacter piechaudii HLE]
          Length = 384

 Score =  410 bits (1053), Expect = e-111,   Method: Composition-based stats.
 Identities = 196/348 (56%), Positives = 256/348 (73%), Gaps = 12/348 (3%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L +   I+A  +  +Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWMHQRGADSFDAMTDLAREFRGQLASHCRIEALPVNIEQRSTD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLKTSEII 139

Query: 651 GQLWVTEFKLR------REKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSD 704
           GQLW  +  L       R ++ K  ++  R I+N+VMMGMGEPLLNY   + AL+L+L D
Sbjct: 140 GQLWWAKRVLEADIGTARLESAKA-TEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDD 198

Query: 705 HAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELI 764
           +AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPLKEL+
Sbjct: 199 NAYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLKELL 258

Query: 765 LACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPN 824
            AC RY+ ++PR  ITFEYCML GINDTD HA ELI + R+ +    CK+NLIPFN FP 
Sbjct: 259 AACERYLAFAPRDFITFEYCMLDGINDTDQHAKELIQIARQLR----CKLNLIPFNPFPE 314

Query: 825 SNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           S L  S ++R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 315 SGLKRSNSARVKVFAQRLMDAGIITTVRKTRGDDIDAACGQLAGEVRD 362


>gi|387129675|ref|YP_006292565.1| GTP-binding protein EngA [Methylophaga sp. JAM7]
 gi|386270964|gb|AFJ01878.1| GTP-binding protein EngA [Methylophaga sp. JAM7]
          Length = 469

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/433 (48%), Positives = 288/433 (66%), Gaps = 10/433 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MK V+ L+GRPNVGKSTLFNRLT SRDALVA++ GLTRDR YG        FI+IDTGG 
Sbjct: 1   MKSVIALLGRPNVGKSTLFNRLTRSRDALVADHAGLTRDRIYGHVRDDNAQFILIDTGGL 60

Query: 61  EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
             E     M E M KQ   AI E+D+++F+VDGR GL+  D+ I   LR  G+P++LVIN
Sbjct: 61  TNETDS--MSELMRKQAALAIDEADLMVFLVDGRAGLLPADEEIARLLRNVGKPVLLVIN 118

Query: 120 KSENINSS-ISLDFYELGIGNPHIISALYGNGIK---NFLENILTIELPYKKFFKKKEFT 175
           KSE      ++ +FY +G+G P +ISA  G GI    N + NIL   LP      + +  
Sbjct: 119 KSEGEQRELVAAEFYSMGLGEPVVISATQGRGIDRLLNHITNILPETLPELIVESEPDEE 178

Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
              +I   ++AIVG+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE +  +Y  I
Sbjct: 179 EDSTI---RLAIVGRPNVGKSTLVNRLLGEERVVAFDAPGTTRDSIYIPFEKDGTQYTFI 235

Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
           DTAG+RRR+K  E +EKFSV+KTL+++  ANVV+L++DAQ+ I  QD+++A  I ESGR+
Sbjct: 236 DTAGVRRRSKVSEALEKFSVVKTLQAVEAANVVMLVVDAQEGIVDQDLHLAGLIIESGRA 295

Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
           +++ VNKWD +   +R+ + +NI+++L FL+FA  +FISA+  + +   ++S+   Y ++
Sbjct: 296 VVIAVNKWDGLEKQEREWVASNIERRLPFLTFAKTHFISALHGSGVGLLLKSVKQAYQAA 355

Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
           +  + TSR+TR L  AI +HPP      R K R+AH GGKNPP ++IHGN+ +     Y+
Sbjct: 356 LTKIPTSRLTRVLEDAIADHPPPLVNGRRIKYRFAHLGGKNPPRVIIHGNQTEATPQSYR 415

Query: 416 RYLEKYFYRTFSL 428
           RYLE YF  T  L
Sbjct: 416 RYLENYFRTTLKL 428


>gi|291085040|ref|ZP_06570912.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220]
 gi|291071734|gb|EFE09843.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220]
          Length = 504

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/454 (45%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 15  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 74

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 75  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRARQKPTFLVANK 133

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   + +DFY LG+G  H I+A +G G+ + LE++L   LP+      +E  +   
Sbjct: 134 TDGLDPDQAVIDFYSLGLGEIHPIAASHGRGVLSLLEHVL---LPWMDDVAPQEEVD-ED 189

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE+RV+ YD PG
Sbjct: 190 AEYWAKLAAEENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPG 249

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 250 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITEAVEKFSVIKTLQAIEDANVVMLVIDAR 309

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 310 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLGFIDFARVHFISA 369

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   +ST+ +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 370 LHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 429

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF +T  ++
Sbjct: 430 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKTLDVM 463


>gi|339483565|ref|YP_004695351.1| Ribosomal RNA large subunit methyltransferase N [Nitrosomonas sp.
           Is79A3]
 gi|338805710|gb|AEJ01952.1| Ribosomal RNA large subunit methyltransferase N [Nitrosomonas sp.
           Is79A3]
          Length = 366

 Score =  409 bits (1052), Expect = e-111,   Method: Composition-based stats.
 Identities = 188/342 (54%), Positives = 250/342 (73%), Gaps = 6/342 (1%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE PFRA+QL +WIH+   +DFN M+DL+ SLR+KL +   I+ P I+SD ++ DGTRK
Sbjct: 20  IGEKPFRARQLLRWIHQNSTADFNAMSDLAKSLREKLADQAVIELPQIISDYVATDGTRK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N IETV+IPE NR TLC+S+QVGCA+ C FCSTG+QGF RNLTV EI+GQLW
Sbjct: 80  WLLAVGAGNGIETVYIPEANRGTLCVSSQVGCALACTFCSTGKQGFNRNLTVAEIVGQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           +    LR + +   + Q  R +TN+VMMGMGEPL N+++ + AL L+L DHAYGLSRR V
Sbjct: 140 IANKTLRSDVS-DTSIQANRAVTNVVMMGMGEPLANFENVVTALDLMLDDHAYGLSRRRV 198

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++P ID+L + CPV LA+SLHA N+ LR++LVPI+KKYP+KEL+ AC RY+  +
Sbjct: 199 TVSTSGLVPAIDRLRERCPVALAISLHAPNDALRDQLVPINKKYPIKELLAACQRYLLAA 258

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEY ML G+ND+  HA ELI+L++     T CK NLIPFN FP S    S    
Sbjct: 259 PRDFITFEYVMLAGVNDSIAHARELIALVQD----TPCKFNLIPFNSFPGSGFKRSTAET 314

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           +++F  +LM +G+  T+RK RG+DI AACGQL+G+  D  ++
Sbjct: 315 VRVFRDVLMQAGLVTTVRKTRGDDIAAACGQLAGQVKDKTRR 356


>gi|118594986|ref|ZP_01552333.1| hypothetical protein MB2181_04920 [Methylophilales bacterium
           HTCC2181]
 gi|118440764|gb|EAV47391.1| hypothetical protein MB2181_04920 [Methylophilales bacterium
           HTCC2181]
          Length = 363

 Score =  409 bits (1052), Expect = e-111,   Method: Composition-based stats.
 Identities = 190/347 (54%), Positives = 248/347 (71%), Gaps = 5/347 (1%)

Query: 533 VHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDG 592
           + + G  P+RAKQL KWI++ G  DF++MTDL+ S R+ L+ +  I  P I  D +S DG
Sbjct: 16  LEKFGHKPYRAKQLLKWIYQSGEHDFSQMTDLAKSFRQSLQTTSEIATPSIQLDHLSTDG 75

Query: 593 TRKWIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIG 651
           TRKW+  V  KN IE VFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT GEI+G
Sbjct: 76  TRKWLLDVGAKNGIEAVFIPETDRGTLCISSQVGCALECTFCSTGRQGFNRNLTSGEIVG 135

Query: 652 QLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSR 711
           QLW+    LR + N ++ +   R ITN+VMMGMGEPL NY   + AL+++L DH YGLSR
Sbjct: 136 QLWLANKMLREQANYRLLAHEDRIITNVVMMGMGEPLTNYNHVVHALEMMLDDHVYGLSR 195

Query: 712 RHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYI 771
           R V LSTSG+IP IDKL  +CPV LA+SLHA ++ LR+++VPI+KKYPL++L+ AC RYI
Sbjct: 196 RRVTLSTSGLIPAIDKLRDDCPVSLAISLHAPDDKLRDEIVPINKKYPLQDLMAACIRYI 255

Query: 772 TYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSK 831
             +PR  +TFEY ML G+ND+   A  L+ L++       CK NLIPFN FPNS  +CS 
Sbjct: 256 EKAPRDFVTFEYVMLEGVNDSVDQAKALVKLVKN----VPCKFNLIPFNPFPNSGYLCSS 311

Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEM 878
            S I  F ++LM++G+  T+RK RG+DI+AACGQL+G+  D  K+ M
Sbjct: 312 RSVINAFKQVLMDAGLVATVRKTRGDDIDAACGQLAGQVQDKTKRTM 358


>gi|161511228|ref|NP_840246.2| histidyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|46397795|sp|Q82XU9.2|SYH_NITEU RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
          Length = 420

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/355 (55%), Positives = 262/355 (73%), Gaps = 7/355 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F+D LNG+NL+LRPEGTAS +R+VIE+NL+Y GP+RL+YSGPMFRHE
Sbjct: 57   GEVTDIVEKEMYTFVDHLNGENLTLRPEGTASCVRAVIEHNLLYAGPQRLYYSGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAELI+MC+RLW+ L + ++ LE++++G+   R  
Sbjct: 117  RPQKGRYRQFHQVGVEALGFAGPDIDAELIVMCARLWRLLGISDVRLEISTLGSTESRSV 176

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            Y   LI+Y++K  D     ED +  L  N LR+LDSKN  +REIL  AP+L D L++DSL
Sbjct: 177  YRARLISYLEKFCDD--LDEDARRRLKTNPLRILDSKNPAMREILAGAPRLFDDLDEDSL 234

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q+IL   +IS++IN +LVRG+DYYNRTVFEW TDKLG+Q +IC GGRYD LI +
Sbjct: 235  AHFEALQRILRNQDISFEINNRLVRGLDYYNRTVFEWVTDKLGAQGTICAGGRYDGLIAQ 294

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFA+GIER++ L+ + N         DIY+VH G+ A   ++ ++E+LR  
Sbjct: 295  IGGKPAPACGFAMGIERILALMGE-NGAVGAHAIPDIYVVHQGEAAAEFSWKVAESLRDD 353

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 1222
            GLKV+L+    N    FK+QMK+A+AS A FAAIIGE+E++   + IK LR   E
Sbjct: 354  GLKVVLHSGGGN----FKAQMKKADASGARFAAIIGEDEVVAGQISIKPLREAAE 404


>gi|456063410|ref|YP_007502380.1| radical SAM protein [beta proteobacterium CB]
 gi|455440707|gb|AGG33645.1| radical SAM protein [beta proteobacterium CB]
          Length = 397

 Score =  409 bits (1051), Expect = e-111,   Method: Composition-based stats.
 Identities = 195/350 (55%), Positives = 252/350 (72%), Gaps = 14/350 (4%)

Query: 533 VHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDG 592
           V  L E PFRAKQL +WIH+ GVSD N M+DL+ S R  L +   + +  ++ D+ + DG
Sbjct: 5   VAGLNEKPFRAKQLMQWIHQRGVSDINDMSDLAKSFRATLLDKAEVLSLPVIKDEHAADG 64

Query: 593 TRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIG 651
           TRKW+ +V   N +E+VFIPE +R TLCIS+Q GCA+NC FCSTG QGF RNLT GEIIG
Sbjct: 65  TRKWLLNVGAGNAVESVFIPEDDRGTLCISSQAGCAVNCRFCSTGHQGFSRNLTAGEIIG 124

Query: 652 QLWVTEFKLRREKNI-----KINSQG----KRQITNIVMMGMGEPLLNYKSTIGALKLIL 702
           QLW  E  LR + N      K  + G     R I+N+V+MGMGEPLLNY + + AL+L+L
Sbjct: 125 QLWFAEHLLRTDPNAVRRIEKYPTPGWEHTGRVISNVVLMGMGEPLLNYDNVVTALRLML 184

Query: 703 SDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKE 762
            D AYGLSRR V +STSG++PMID+LAQ+CPV LAVSLHA N+ LR++LVP+++KYPL+E
Sbjct: 185 DDRAYGLSRRRVTVSTSGVVPMIDRLAQDCPVALAVSLHAPNDKLRDQLVPLNQKYPLRE 244

Query: 763 LILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCF 822
           L+ AC RY+ ++PR  +TFEYCML G+ND+DI A EL+ L+   K    CKINLIPFN F
Sbjct: 245 LLAACERYLPFAPRDFLTFEYCMLDGVNDSDIQAKELVRLLANIK----CKINLIPFNPF 300

Query: 823 PNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           P S L  S   R+  FA IL+++G+  T+RK RG+DI AACGQL+G+  D
Sbjct: 301 PESGLKRSSAQRVHAFASILLDAGMVATVRKTRGDDIAAACGQLAGDVVD 350


>gi|422321702|ref|ZP_16402747.1| ribosomal RNA large subunit methyltransferase N [Achromobacter
           xylosoxidans C54]
 gi|317403336|gb|EFV83849.1| ribosomal RNA large subunit methyltransferase N [Achromobacter
           xylosoxidans C54]
          Length = 384

 Score =  409 bits (1051), Expect = e-111,   Method: Composition-based stats.
 Identities = 195/347 (56%), Positives = 255/347 (73%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L +   I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWMHQRGADSFDAMTDLARDFRGQLASRCVIEALAVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLKTSEII 139

Query: 651 GQLWVTEFKLRRE-KNIKINS----QGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L  +    ++ S       R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEADIGTARLESARATDDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPLKEL+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLKELLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI + R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAFAPRDFITFEYCMLDGINDTDQHARELIHIARQIR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPSARVKVFAQRLMDAGIITTVRKTRGDDIDAACGQLAGEVRD 362


>gi|152995389|ref|YP_001340224.1| small GTP-binding protein [Marinomonas sp. MWYL1]
 gi|189037150|sp|A6VV10.1|DER_MARMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|150836313|gb|ABR70289.1| small GTP-binding protein [Marinomonas sp. MWYL1]
          Length = 445

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/425 (46%), Positives = 296/425 (69%), Gaps = 9/425 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT SRDALVA+YPGLTRDR YG+G +G+  FI+IDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+  AI E+D+++F+VDGR GL   D++I + LR+S + + LV+NK
Sbjct: 61  SGD-EQGIDEKMARQSLLAIEEADVVLFLVDGRHGLNPADEMIASHLRRSNKQVSLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ IN  I+L DFY LG G  H I+A +G G+   ++ ++   LP+ +  + +E  N  S
Sbjct: 120 TDGINEDIALADFYSLGFGELHPIAASHGKGVHVLIDKVM---LPFAE--RVEEAKNQIS 174

Query: 180 IEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
           IE   I++ +VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+   +  N+K+Y LIDT
Sbjct: 175 IESRGIRIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYVRNDKEYTLIDT 234

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AGIRRR    E +EKFS++K L++I +ANVVI+++D+ +N+  QD+++  ++ ++GR +I
Sbjct: 235 AGIRRRKHVKEAVEKFSIVKALQAIQDANVVIVVIDSHENLVEQDLHMIGYVLDAGRGVI 294

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + +NKWD +  + R+ IK+ ++++L F+ +A  ++ISA+    +    ++I   Y+S   
Sbjct: 295 IAINKWDGLKKDDREHIKSEVERRLGFVPYAKVHYISALHGTGVGDLYDTIESTYESCYA 354

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
             +T+R+TR L  +I  H P      R KLRYAHQGG NPP IV+HGN+   +   YKRY
Sbjct: 355 KWTTNRLTRILEDSIAEHQPPMVNSRRIKLRYAHQGGSNPPRIVVHGNQTDSLPGSYKRY 414

Query: 418 LEKYF 422
           LE  F
Sbjct: 415 LENKF 419


>gi|74316609|ref|YP_314349.1| hypothetical protein Tbd_0591 [Thiobacillus denitrificans ATCC
           25259]
 gi|123773051|sp|Q3SL73.1|RLMN_THIDA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|74056104|gb|AAZ96544.1| Conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 372

 Score =  409 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 191/344 (55%), Positives = 251/344 (72%), Gaps = 10/344 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E GE PFRA+Q+  WIH+ GV+DF +MTD++ SLR+KL+N   ++AP I    +S DGTR
Sbjct: 19  ERGEKPFRARQVFHWIHQAGVTDFAQMTDIAKSLREKLQNEAVVQAPAINFAHLSADGTR 78

Query: 595 KWIFHVK-KNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N IETVFIPE +R TLC+S+QVGCA+ C FCSTGRQGF RNLTV EI+GQL
Sbjct: 79  KWLFDVGVGNGIETVFIPEDDRGTLCVSSQVGCALECTFCSTGRQGFNRNLTVAEIVGQL 138

Query: 654 WVTEFKLRREKNIKINSQG-----KRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           WV +  L+RE N   +  G     +R +TN+VMMGMGEPL N+++ + AL ++L DHAYG
Sbjct: 139 WVAQHSLKREPNRTASDHGAGEIAERPVTNVVMMGMGEPLANFENVVTALGVMLDDHAYG 198

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V +STSG++P +D+LA+ CPV LAVSLHA N+ LR+++VPI++KYPL EL+ AC 
Sbjct: 199 LSRRRVTVSTSGLVPAMDRLAERCPVALAVSLHAPNDALRDQIVPINRKYPLAELMAACR 258

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+ ++PR  ITFEY ML G+ND   HA +LI+L R       CK NLIPFN FP+S   
Sbjct: 259 RYLVHAPRDFITFEYVMLAGVNDQPEHARQLIALTRD----VPCKFNLIPFNPFPDSGYE 314

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
             +   +++F +IL ++G  VT RK RG+DI+AACGQL+G   D
Sbjct: 315 KPRAEAMRVFREILQDAGYVVTTRKTRGDDIDAACGQLAGRVAD 358


>gi|333908807|ref|YP_004482393.1| GTP-binding protein engA [Marinomonas posidonica IVIA-Po-181]
 gi|333478813|gb|AEF55474.1| GTP-binding protein engA [Marinomonas posidonica IVIA-Po-181]
          Length = 446

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/423 (45%), Positives = 294/423 (69%), Gaps = 5/423 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT SRDALVA+YPGLTRDR YG+G +G   FI+IDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGKVGGHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+  AI E+D ++F+VDGR GL   D++I N LR+S +P+ LV+NK
Sbjct: 61  SGD-EQGIDEKMARQSLLAIEEADTVLFLVDGRHGLNPADEMIANHLRRSNKPVTLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ IN  I+L DFY LG G    I+A +G G+   +++++   LP+ +  ++ +      
Sbjct: 120 TDGINEDIALADFYSLGFGELQPIAAAHGKGVHVLIDHVM---LPFAEQVEEAKNQIDLD 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++ +VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+   +  ++K+Y LIDTAG
Sbjct: 177 SRGIRIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYLRHDKEYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR    E +EKFS++KTL++I +ANVVI+++D+ +++  QD+++  ++ ++GR +++ 
Sbjct: 237 IRRRKHVKEAVEKFSIVKTLQAIQDANVVIVVIDSHEDLVEQDLHMIGYVLDAGRGVVIA 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  ++R+ IK+ ++++L F+ +A  ++ISA+    +    ++I   Y+S     
Sbjct: 297 INKWDGLQKDEREHIKSEVERRLGFVPYAKVHYISALHGTAVGDLYDTIETTYESCYAKW 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+TR L  A+  H P      R KLRYAHQGG NPP IV+HGN++  +   YKRYLE
Sbjct: 357 STNRLTRILEDAVSEHQPPMVNSRRIKLRYAHQGGSNPPRIVVHGNQVNSLPGSYKRYLE 416

Query: 420 KYF 422
             F
Sbjct: 417 NKF 419


>gi|325981894|ref|YP_004294296.1| ribosomal RNA large subunit methyltransferase N [Nitrosomonas sp.
           AL212]
 gi|325531413|gb|ADZ26134.1| Ribosomal RNA large subunit methyltransferase N [Nitrosomonas sp.
           AL212]
          Length = 366

 Score =  409 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 191/339 (56%), Positives = 248/339 (73%), Gaps = 6/339 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRA+QL +WIH+FG++DF+ M+DL+  LR+KL     I+ P IMSD ++ DGTR
Sbjct: 19  EIGEKPFRARQLLRWIHQFGIADFDLMSDLAKGLREKLATQAVIELPTIMSDYVAADGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N IETVFIPE +R TLCIS+QVGCA+ C FCSTG+QGF RNLTV EIIGQL
Sbjct: 79  KWLLSVGAGNGIETVFIPEISRGTLCISSQVGCALACTFCSTGKQGFNRNLTVAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+   K+          Q KR +TN+VMMGMGEPL N+++ + AL L+L DHAYGLSRR 
Sbjct: 139 WIAN-KMLETCGDDTKLQTKRAVTNVVMMGMGEPLANFENVVTALDLMLDDHAYGLSRRR 197

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P ID+L + CPV LAVSLHA N+ LR++LVPI+KKYP+KEL+ AC RY++ 
Sbjct: 198 VTVSTSGLVPAIDRLRERCPVALAVSLHAPNDTLRDQLVPINKKYPIKELLAACQRYLSA 257

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND+  HA EL+ L++       CK NLIPFN F +S    S   
Sbjct: 258 APRDFITFEYVMLDGINDSVAHACELVKLVQD----IPCKFNLIPFNSFSDSGYKRSSTE 313

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            I++F  +L+++G+  T+RK RG+DI AACGQL+G+  D
Sbjct: 314 AIRVFRDVLVHAGLITTVRKTRGDDIAAACGQLAGQVKD 352


>gi|311105357|ref|YP_003978210.1| radical SAM superfamily protein 2 [Achromobacter xylosoxidans A8]
 gi|310760046|gb|ADP15495.1| radical SAM superfamily protein 2 [Achromobacter xylosoxidans A8]
          Length = 384

 Score =  409 bits (1050), Expect = e-111,   Method: Composition-based stats.
 Identities = 195/347 (56%), Positives = 254/347 (73%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  +  +Q S D
Sbjct: 20  LVGKWGGKPFRARQLQRWMHQRGADSFDAMTDLARDFRGQLAQHCRIEALPVNIEQRSTD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLKTSEII 139

Query: 651 GQLWVTEFKLRRE-KNIKINS----QGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L  +    ++ S    +  R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEADIGTARLESARATEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPLKEL+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLKELLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI + R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAFAPRDFITFEYCMLDGINDTDQHAKELIQIARQLR----CKLNLIPFNPFPES 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSNSARVKVFAQRLMDAGIITTVRKTRGDDIDAACGQLAGEVRD 362


>gi|372270400|ref|ZP_09506448.1| GTP-binding protein engA [Marinobacterium stanieri S30]
          Length = 477

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/423 (46%), Positives = 288/423 (68%), Gaps = 5/423 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDR YGEG +G   +I+IDTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRKYGEGRLGNCDYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI   M +Q+ QAI E++I++F+VDGR GL   D++I + LR+  +   LV+NK
Sbjct: 61  SGD-EDGIDQRMAEQSLQAIDEANIVLFLVDGRAGLNPADEMIADHLRRQEKECWLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ I+  +++ DFY LGIG P  I+A +G  +   ++ +L    P+     ++       
Sbjct: 120 TDGIDPDVAMADFYALGIGQPVPIAASHGRNVTMLMDEVLA---PFIVEEDEEAEGEQEH 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I++AIVG+PNVGKSTL+N +LGE+RV+ YD  GTTRDSI   +E + + Y LIDTAG
Sbjct: 177 DDSIRIAIVGRPNVGKSTLVNRMLGEDRVVVYDQAGTTRDSIYIPYERDGQDYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E +EKFS++KTL++I +ANVV+ ++DA++ ++ QD+++  F+ +SGR+L+V 
Sbjct: 237 VRRRKNIKEAVEKFSIVKTLQAIKDANVVVSVIDAREGVTEQDLSMLGFVIDSGRALVVT 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    R+ +K  ++++L F  FA F+FISA+    + +  +SIN  YD ++   
Sbjct: 297 LNKWDGMTAEDREHVKTQVERRLEFAGFARFHFISALHGTGVGNLYDSINEAYDCAMAKW 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+++T+ L   + +H P      R KLRYAHQGG NPPIIV+HGN+   +   YKRYLE
Sbjct: 357 STNQLTKLLEDVVADHQPPAVNNRRIKLRYAHQGGSNPPIIVVHGNQTNALPGSYKRYLE 416

Query: 420 KYF 422
             F
Sbjct: 417 NRF 419


>gi|344338106|ref|ZP_08769039.1| GTP-binding protein engA [Thiocapsa marina 5811]
 gi|343802160|gb|EGV20101.1| GTP-binding protein engA [Thiocapsa marina 5811]
          Length = 466

 Score =  408 bits (1048), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/430 (46%), Positives = 285/430 (66%), Gaps = 6/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ L+GRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG G +G   ++I+DTGG 
Sbjct: 1   MLPVITLIGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRQYGIGVVGPSRYVIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
              +  G+   M +Q + AI E+D ++F+VD R G    D  I   LR+ G+P+ LV+NK
Sbjct: 61  SQAID-GVEALMERQVRLAIDEADHLLFLVDARDGCTPGDIEIAARLRRMGKPVSLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           S+ ++  ++  DF+ LG+G P  +SA +G G+++ ++ +     P       +      +
Sbjct: 120 SDTMDPVLATADFHRLGLGEPMAVSATHGRGVQDLIDAVFA-RFP---LVDDEGIGAAET 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            E I+VAIVG+PN GKSTLIN +LG++R++T+D+PGTTRDSI   FE   + Y LIDTAG
Sbjct: 176 EEGIRVAIVGRPNAGKSTLINRILGDDRLVTFDSPGTTRDSIFVPFEQQGRHYTLIDTAG 235

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR++  +VIEKFSVIKTL++I  ANVVIL+LDA + +  QD  +A  I E GR+L+V 
Sbjct: 236 MRRRSRVDDVIEKFSVIKTLQAIDAANVVILVLDAHEGVGEQDATLAGHIIERGRALVVA 295

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  +QR+ IK    +KL FL FA  + +SA+  + +   ++ +   Y ++  +L
Sbjct: 296 INKWDGLAPDQREQIKTQFARKLAFLDFAKMHLVSALHGSGVGLLLDEVEKAYTNATRNL 355

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L  A++ H P      R KLRYAHQGG+NPPII+IHGN+   + + Y+RYL 
Sbjct: 356 STPELTRLLEDAVQEHQPPLVHGRRIKLRYAHQGGRNPPIIIIHGNQTDSVPDTYRRYLI 415

Query: 420 KYFYRTFSLI 429
             F R   L+
Sbjct: 416 NRFRRELKLL 425


>gi|149926356|ref|ZP_01914617.1| hypothetical protein LMED105_13193 [Limnobacter sp. MED105]
 gi|149824719|gb|EDM83933.1| hypothetical protein LMED105_13193 [Limnobacter sp. MED105]
          Length = 379

 Score =  407 bits (1047), Expect = e-110,   Method: Composition-based stats.
 Identities = 196/359 (54%), Positives = 260/359 (72%), Gaps = 11/359 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQL KWIH+ G+ +F+ MTDL+ S R+ L +   IKAP I+SD +S DGTRK
Sbjct: 23  LGEKPFRAKQLAKWIHQSGMDNFDSMTDLAKSFRQNLNSRACIKAPSIISDNVSKDGTRK 82

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   + +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EI+ QLW
Sbjct: 83  WLFDVGNGDAVETVFIPEERRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIVAQLW 142

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
                L RE   ++ +Q +R +TN+VMMGMGEPLLNY + + AL+L+L D AYGLSRR V
Sbjct: 143 KANV-LLREAGDRVYAQ-ERPVTNVVMMGMGEPLLNYDALVPALQLMLDDTAYGLSRRRV 200

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++P +D+L+Q+CPV LAVSLHA N+ LR+ LVP++KKYPL+EL+ AC RY+ ++
Sbjct: 201 TVSTSGVVPFMDRLSQDCPVALAVSLHAPNDALRDHLVPLNKKYPLRELLDACLRYLKFA 260

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEY ML G+ND   HA +L+ + +    +  CK NLIPFN FP S L+ S +  
Sbjct: 261 PRDFITFEYVMLDGVNDKPEHAQQLLEIAK----IVPCKFNLIPFNPFPESGLLKSTSPA 316

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD--IVKKEMYSFI--DELNGDN 889
           IK F  IL  +G+  T+RK RG+DI+AACGQL+GE  D   VK+ + S +  +EL G +
Sbjct: 317 IKTFVDILGGAGVVTTVRKTRGDDIDAACGQLAGEVRDRTKVKERLVSTVSLEELRGSS 375


>gi|412338305|ref|YP_006967060.1| hypothetical protein BN112_0980 [Bordetella bronchiseptica 253]
 gi|408768139|emb|CCJ52898.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
          Length = 382

 Score =  407 bits (1046), Expect = e-110,   Method: Composition-based stats.
 Identities = 195/347 (56%), Positives = 251/347 (72%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWVHQRGADSFDAMTDLARDFRAQLARDCVIEALPVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLRASEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGK-----RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L    +      GK     R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEAAVDTARLPGGKAGEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPL  L+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLNALLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPSARVKVFAQRLMDAGIVTTVRKTRGDDIDAACGQLAGEVRD 362


>gi|348618423|ref|ZP_08884949.1| histidine tRNA synthetase (Histidine--tRNA ligase) (HisRS)
            [Candidatus Glomeribacter gigasporarum BEG34]
 gi|347816299|emb|CCD29692.1| histidine tRNA synthetase (Histidine--tRNA ligase) (HisRS)
            [Candidatus Glomeribacter gigasporarum BEG34]
          Length = 440

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 182/351 (51%), Positives = 252/351 (71%), Gaps = 2/351 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMY F D LNG+ LSLRPE TA+++R+ IE++L+YDGPKRLWYSGPMFRHE
Sbjct: 63   GAATDIVEKEMYCFTDALNGEQLSLRPENTAAIVRAAIEHHLLYDGPKRLWYSGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD+DAE+I+   RLW  L L+ + LELN++G  +ER  
Sbjct: 123  RPQRGRYRQFHQLGVEALGFAGPDVDAEIILAGQRLWDCLQLQGLRLELNTLGQLDERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   L +Y+K+H +     ED K  L  N LR+LD+KN  +++I+  AP+L+D+L + S 
Sbjct: 183  HRAALADYLKRHIE--LLDEDAKRRLETNPLRILDTKNPALQDIMRGAPRLMDFLGEASR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +++IL  N IS+ +N +LVRG+DYYN TVFEW TD+LG+Q S+ GGGRYD LI++
Sbjct: 241  AHFEALRRILQANGISFTLNPRLVRGLDYYNLTVFEWVTDRLGAQGSVAGGGRYDRLIEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER++EL+K+ +        CD Y++H G+ A  +AF +SE LR  
Sbjct: 301  LGGKPAPACGWALGVERILELLKENDPGARPEPHCDAYVLHQGEAARTQAFAVSERLRAA 360

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR 1218
            GL V+ +C  +     FK+QMK A+AS A +A IIGE+E+ + T+ IK LR
Sbjct: 361  GLSVVQHCSGDGAPVRFKTQMKHADASGAQYAVIIGEDEVNSGTVTIKALR 411


>gi|297538107|ref|YP_003673876.1| radical SAM enzyme, Cfr family [Methylotenera versatilis 301]
 gi|297257454|gb|ADI29299.1| radical SAM enzyme, Cfr family [Methylotenera versatilis 301]
          Length = 374

 Score =  407 bits (1046), Expect = e-110,   Method: Composition-based stats.
 Identities = 195/343 (56%), Positives = 249/343 (72%), Gaps = 5/343 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E GE PFRAKQL +W+H FGV DF +MTD++  LR+KL     I  P++  +Q+S DGTR
Sbjct: 25  EQGEKPFRAKQLMRWMHHFGVYDFEQMTDIAKVLREKLVVDAEITLPNVQLEQVSNDGTR 84

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+      N IETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNL+V EIIGQL
Sbjct: 85  KWLIGTDTANSIETVFIPEDDRGTLCISSQVGCALECTFCSTGRQGFNRNLSVSEIIGQL 144

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
            +    LR+E    + S   R I+N+VMMGMGEPL NY + + A++++L D+AYGLSRR 
Sbjct: 145 AIANQSLRQESGYDLLSANDRIISNVVMMGMGEPLANYDNVVTAMQIMLDDNAYGLSRRR 204

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++P +D+L ++CPV LAVSLHA N+ LR+ +VPI+KKYPLKEL+ AC+RY+  
Sbjct: 205 VTLSTSGMVPAMDRLKEDCPVALAVSLHAPNDALRDVIVPINKKYPLKELMAACNRYLEK 264

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEY ML G+NDT  HA +L+ L+R      SCK NLIPFN FPNS    SK S
Sbjct: 265 APRDFVTFEYVMLDGVNDTVEHAHQLLDLVRN----VSCKFNLIPFNPFPNSGYDTSKAS 320

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
            I++F  ILM +G  VT+RK RG DI+AACGQL+G+  D  K+
Sbjct: 321 HIRVFRDILMQAGYVVTVRKTRGEDIDAACGQLAGKVLDKTKR 363


>gi|157144555|ref|YP_001451874.1| GTP-binding protein EngA [Citrobacter koseri ATCC BAA-895]
 gi|166224326|sp|A8AD75.1|DER_CITK8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|157081760|gb|ABV11438.1| hypothetical protein CKO_00275 [Citrobacter koseri ATCC BAA-895]
          Length = 490

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/454 (45%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   + +DFY LG+G  H I+A +G G+ + LE++L   LP+      +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIHPIAASHGRGVLSLLEHVL---LPWMDDVAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE+RV+ YD PG
Sbjct: 176 AEYWAKLAAEENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDEREYVLIDTAGVRKRGKVTDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   +ST+ +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMAMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|119897215|ref|YP_932428.1| hypothetical protein azo0924 [Azoarcus sp. BH72]
 gi|205829650|sp|A1K3Y6.1|RLMN_AZOSB RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|119669628|emb|CAL93541.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 375

 Score =  407 bits (1046), Expect = e-110,   Method: Composition-based stats.
 Identities = 191/347 (55%), Positives = 249/347 (71%), Gaps = 10/347 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRA+Q+ +W+H+ G  DF++MTD++ SLR KLK    I+ P  + D +S DGTRK
Sbjct: 22  LGEKPFRARQVMRWMHREGCDDFDQMTDVAKSLRAKLKEIAVIRPPVPVRDSVSSDGTRK 81

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE NR TLC+S+Q GCA++C FCSTG+QGF RNLT  EIIGQLW
Sbjct: 82  WLLDVGNANAVETVFIPETNRGTLCVSSQAGCALDCAFCSTGKQGFNRNLTAAEIIGQLW 141

Query: 655 VTEFKLRREKNIKINSQGK-----RQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGL 709
           +    L   ++   + +       R I+N+VMMGMGEPL N+ + + AL+L+L DHAYGL
Sbjct: 142 LANKLLGAARDAAADLEAGEKDNGRIISNVVMMGMGEPLANFDNVVTALRLMLDDHAYGL 201

Query: 710 SRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHR 769
           SRR V +STSGI+P ID+L  ECPV LAVSLHASN+ LR++LVPI++KYPL+EL+ AC R
Sbjct: 202 SRRRVTVSTSGIVPAIDRLRDECPVALAVSLHASNDALRDRLVPINQKYPLRELMAACQR 261

Query: 770 YITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLIC 829
           Y+  +PR  ITFEY ML G+ND + HA ELI+L+R       CK NLIPFN FPNS    
Sbjct: 262 YLERAPRDFITFEYVMLDGVNDQEAHARELIALVRD----VPCKFNLIPFNPFPNSGFQR 317

Query: 830 SKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           S   RI+ FA IL+++GI  T RK RG+D++AACGQL+G+  D  ++
Sbjct: 318 SNAERIRRFAGILLDAGIVTTTRKTRGDDVDAACGQLAGQVQDKTRR 364


>gi|427821838|ref|ZP_18988900.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
 gi|410587103|emb|CCN02133.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
          Length = 382

 Score =  407 bits (1046), Expect = e-110,   Method: Composition-based stats.
 Identities = 194/347 (55%), Positives = 251/347 (72%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWVHQRGADSFDAMTDLAREFRAQLARDCVIEALPVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLRASEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGK-----RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L    +      GK     R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEAAADTARLPGGKAGEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPL  L+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLNALLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+++FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPSARVRVFAQRLMDAGIVTTVRKTRGDDIDAACGQLAGEVRD 362


>gi|33593205|ref|NP_880849.1| hypothetical protein BP2201 [Bordetella pertussis Tohama I]
 gi|384204502|ref|YP_005590241.1| hypothetical protein BPTD_2167 [Bordetella pertussis CS]
 gi|410419762|ref|YP_006900211.1| hypothetical protein BN115_1973 [Bordetella bronchiseptica MO149]
 gi|427821310|ref|ZP_18988373.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
 gi|81578506|sp|Q7VWK8.1|RLMN_BORPE RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|33563580|emb|CAE42479.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332382616|gb|AEE67463.1| hypothetical protein BPTD_2167 [Bordetella pertussis CS]
 gi|408447057|emb|CCJ58729.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
 gi|410572310|emb|CCN20582.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
          Length = 382

 Score =  407 bits (1045), Expect = e-110,   Method: Composition-based stats.
 Identities = 194/347 (55%), Positives = 251/347 (72%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWVHQRGADSFDAMTDLARDFRAQLARDCVIEALPVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLRASEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGK-----RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L    +      GK     R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEAAADTARLPGGKAGEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPL  L+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLNALLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+++FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPSARVRVFAQRLMDAGIVTTVRKTRGDDIDAACGQLAGEVRD 362


>gi|114319757|ref|YP_741440.1| GTP-binding protein EngA [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312352|sp|Q0AB37.1|DER_ALHEH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|114226151|gb|ABI55950.1| small GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 467

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/438 (45%), Positives = 291/438 (66%), Gaps = 21/438 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT SRDALVA++PGLTRDR YG G +G++ +I++DTGG 
Sbjct: 1   MDPVIALVGRPNVGKSTLFNQLTRSRDALVADHPGLTRDRQYGVGKVGERPYIVVDTGGL 60

Query: 61  --EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
             +PE   G+   M +Q   AI E+D I+F+VDGR G    D+ +   LR+ G+P+ LV+
Sbjct: 61  GDDPE---GVEQGMHQQALAAIEEADAILFLVDGRSGPTAADEELAAHLRRQGKPVWLVV 117

Query: 119 NKSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
           NK++ ++  ++  +F+ LG+G P  I+A +G GI   ++++L   LP       + FT+ 
Sbjct: 118 NKTDGVDHRLATAEFHALGLGEPLPIAAAHGRGIAGLMDHVLA-GLP-------EGFTSA 169

Query: 178 HSIEYI-------KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
           H+   +       ++AIVG+PNVGKSTL+N LLGE RV+ YD PGTTRDS+    E + +
Sbjct: 170 HAALQVEEAEGATRIAIVGRPNVGKSTLVNRLLGEERVLVYDMPGTTRDSVFIPLERDGR 229

Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
            Y LIDTAG+RRR +  E +EKFSVI+TLK++  A+VVIL++DA++ ++ QD ++   + 
Sbjct: 230 PYTLIDTAGMRRRARVHETVEKFSVIQTLKAMEAAHVVILVIDAREGVTDQDTHLIGHVL 289

Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
           ESGR+L++ +NKWD +   QR+ +K  +++KL FL+FA  +FISA+  + +     +++ 
Sbjct: 290 ESGRALVLAINKWDGLTAEQREAVKAGLERKLTFLNFARRHFISALHGSGVGLLFGAVDK 349

Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
             +++   L T  +   L  A+  H P   +  R KLRYAHQGGKNPP+IVIHGN++K +
Sbjct: 350 ALEAARRDLPTPILNEILADAVAAHAPPLVQGRRIKLRYAHQGGKNPPVIVIHGNQVKKL 409

Query: 411 GNDYKRYLEKYFYRTFSL 428
              YKRYLE  F     L
Sbjct: 410 PGAYKRYLEHVFRDELDL 427


>gi|33602154|ref|NP_889714.1| hypothetical protein BB3178 [Bordetella bronchiseptica RB50]
 gi|427814221|ref|ZP_18981285.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
 gi|81579923|sp|Q7WHM8.1|RLMN_BORBR RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|33576592|emb|CAE33670.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|410565221|emb|CCN22774.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
          Length = 382

 Score =  406 bits (1043), Expect = e-110,   Method: Composition-based stats.
 Identities = 193/347 (55%), Positives = 251/347 (72%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWVHQRGADSFDAMTDLARDFRAQLARDCVIEALPVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLRASEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGK-----RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L    +      GK     R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEAAADTARLPGGKAGEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP+++KYPL  L+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNRKYPLNALLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+++FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPSARVRVFAQRLMDAGIVTTVRKTRGDDIDAACGQLAGEVRD 362


>gi|410473483|ref|YP_006896764.1| hypothetical protein BN117_2930 [Bordetella parapertussis Bpp5]
 gi|408443593|emb|CCJ50263.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
          Length = 382

 Score =  406 bits (1043), Expect = e-110,   Method: Composition-based stats.
 Identities = 193/347 (55%), Positives = 251/347 (72%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWVHQRGADSFDAMTDLARDFRAQLARDCVIEALPVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLRASEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGK-----RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L    +      GK     R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEAAADTARLPGGKAGEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP+++KYPL  L+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNRKYPLNALLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+++FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPSARVRVFAQRLMDAGIVTTVRKTRGDDIDAACGQLAGEVRD 362


>gi|114332132|ref|YP_748354.1| histidyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313187|sp|Q0AE43.1|SYH_NITEC RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|114309146|gb|ABI60389.1| histidyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 421

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/355 (55%), Positives = 258/355 (72%), Gaps = 6/355 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSFID+LNG+NL+LRPEGTAS +R+VIE+NL+Y GP+RL+YSGPMFRHE
Sbjct: 57   GEVTDIVEKEMYSFIDQLNGENLTLRPEGTASCVRAVIEHNLLYSGPQRLYYSGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAELIIMC+RLW+ L + ++ LE++++G+   R  
Sbjct: 117  RPQKGRYRQFHQVGVEALGFVGPDIDAELIIMCARLWRLLGIPDVRLEISTLGSIESRLI 176

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            Y   LI+Y++K  D     ED +  L  N LR+LDSKN  +REIL  AP L D L++DSL
Sbjct: 177  YRARLISYLEKFYDE--LDEDARRRLKTNPLRILDSKNPGMREILEGAPHLFDDLDEDSL 234

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q+IL    IS++IN +LVRG+DYYNRTVFEW TDKLG+Q +IC GGRYD LI +
Sbjct: 235  IHFDALQRILRNQGISFEINHRLVRGLDYYNRTVFEWVTDKLGAQGTICAGGRYDGLIAQ 294

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFA+GIER++ LI + ++        D+Y+VH G  A   ++ ++E+LR  
Sbjct: 295  IGGKPAPACGFAMGIERILSLISETDVAAEIHTVPDVYVVHQGDIAAGFSWKVAESLRDA 354

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 1222
            G KV+L+        SFK+QMK+A+AS A FAAIIG++E     + IK LR   E
Sbjct: 355  GFKVVLHSGGG----SFKAQMKKADASGARFAAIIGDDEAATGQVSIKSLREAVE 405


>gi|71908601|ref|YP_286188.1| hypothetical protein Daro_2988 [Dechloromonas aromatica RCB]
 gi|123760407|sp|Q47BR3.1|RLMN_DECAR RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|71848222|gb|AAZ47718.1| 23S rRNA m(2)A-2503 methyltransferase [Dechloromonas aromatica RCB]
          Length = 364

 Score =  406 bits (1043), Expect = e-110,   Method: Composition-based stats.
 Identities = 192/343 (55%), Positives = 251/343 (73%), Gaps = 11/343 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E GE PFRAKQ+ +WIH+ GV+DF+ MTD++ SLR+KLK    +  P ++SD++S DGTR
Sbjct: 19  EQGEKPFRAKQVLRWIHRSGVADFDAMTDIAKSLREKLKAKAVVAPPAVVSDKLSDDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           K++  V   N +ETVFIPE +R TLCISTQ GCA++C FCSTG+QGF RNL+V EIIGQL
Sbjct: 79  KFLIDVGNGNAVETVFIPEDDRGTLCISTQAGCALDCAFCSTGKQGFNRNLSVAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W     L            +R I+N+V+MGMGEPL N+++++ ALKL+L D+AYGLSRR 
Sbjct: 139 WQANHALGAVHG------DERVISNVVLMGMGEPLANFENSVAALKLMLDDNAYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           + +STSG++P++D+L  ECPV LAVSLHA N+ LR++LVPI++KYPLKEL+ AC RY+  
Sbjct: 193 ITVSTSGLVPVMDRLGDECPVALAVSLHAPNDKLRDQLVPINQKYPLKELMAACQRYLEK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GINDTD HA EL++L++       CK NLIPFN FP S    S   
Sbjct: 253 APRDFITFEYIMLDGINDTDAHARELLALVKS----VHCKFNLIPFNPFPGSPFRRSPAE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           R++ FA ILM +GI  T RK RG+DI+AACGQL+G+  D  K+
Sbjct: 309 RVRHFADILMQAGIVTTTRKTRGDDIDAACGQLAGQVQDKTKR 351


>gi|407695036|ref|YP_006819824.1| GTPase Der [Alcanivorax dieselolei B5]
 gi|407252374|gb|AFT69481.1| GTPase Der [Alcanivorax dieselolei B5]
          Length = 465

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/423 (44%), Positives = 282/423 (66%), Gaps = 5/423 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+G +G + +I++DTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGDGRMGDRPYIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   MT Q   A+ E+D ++F+VDGR GL   D+ + + LRK  +P+ LV+NK
Sbjct: 61  G-ESEEGIDRPMTDQALLAVGEADAVLFMVDGRAGLTAADQQVASELRKLPKPVFLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+     I+A +G G++  ++ +L +   + +  +  E      
Sbjct: 120 TDGLDPDSAMADFYALGLTQVLPIAAAHGRGVRALMDEVLAV---FPEPEETGEEEEPED 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + ++VA++G+PNVGKSTLIN +LGE RV+ +D  GTTRDSI+  FE N + Y+LIDTAG
Sbjct: 177 PDTVRVAVLGRPNVGKSTLINRILGEERVVVFDQAGTTRDSIEVPFERNGRPYVLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E IEKFSVIK L+++  A VV+L++DA+  IS QD+++  ++ E+GR+L++ 
Sbjct: 237 VRRRGKVHETIEKFSVIKALQAVDAAQVVLLVVDARDGISDQDLHLLGYVLEAGRALVIA 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + +  +K  + ++L F+ +A   FISA+    +      +   +DS+ I +
Sbjct: 297 MNKWDGLESDHKDWVKQQLDRRLQFVPWAKIKFISALHGTGVGDLFGLVERAWDSAFIKI 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            ++ +TR L      HPP R    R KLRYAH GG NPP++VIHGNR   +   Y+RYLE
Sbjct: 357 GSNALTRMLEDITHAHPPPRSGRFRAKLRYAHLGGSNPPVVVIHGNRTDSLPVSYRRYLE 416

Query: 420 KYF 422
             F
Sbjct: 417 NRF 419


>gi|432388021|ref|ZP_19630908.1| GTPase Der [Escherichia coli KTE16]
 gi|432514817|ref|ZP_19752039.1| GTPase Der [Escherichia coli KTE224]
 gi|432699945|ref|ZP_19935098.1| GTPase Der [Escherichia coli KTE169]
 gi|432746510|ref|ZP_19981175.1| GTPase Der [Escherichia coli KTE43]
 gi|433145114|ref|ZP_20330255.1| GTPase Der [Escherichia coli KTE168]
 gi|430905524|gb|ELC27133.1| GTPase Der [Escherichia coli KTE16]
 gi|431041203|gb|ELD51734.1| GTPase Der [Escherichia coli KTE224]
 gi|431242921|gb|ELF37311.1| GTPase Der [Escherichia coli KTE169]
 gi|431291048|gb|ELF81571.1| GTPase Der [Escherichia coli KTE43]
 gi|431660743|gb|ELJ27606.1| GTPase Der [Escherichia coli KTE168]
          Length = 490

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/454 (45%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   MT+Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMTEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|323499818|ref|ZP_08104777.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326]
 gi|323315059|gb|EGA68111.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326]
          Length = 494

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/455 (43%), Positives = 300/455 (65%), Gaps = 28/455 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIAQHLRKLEKPSMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGI-------------------KNFLENILT 160
            + I++ + S +F++LG+ N + I+A +G G+                   K  LE++  
Sbjct: 120 VDGIDADAASAEFWQLGVENMYQIAAAHGRGVTALIDLALNPFAEKLLEESKGELEDLTG 179

Query: 161 IE------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
            E      L Y +   ++EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FEDEEQDKLDYTEEEAEQEFNRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVMLVIDA 298

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVIAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFIS 358

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGG 418

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+VIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 419 YNPPIVVIHGNQVNELPDSYKRYLMNYYRKSLEIM 453


>gi|254506757|ref|ZP_05118897.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16]
 gi|219550338|gb|EED27323.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16]
          Length = 494

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/454 (44%), Positives = 302/454 (66%), Gaps = 27/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIAKHLRKLEKPSMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGI-------------------KNFLENILT 160
            + I++ + S +F++LG+ N + I+A +G G+                   K  LE++  
Sbjct: 120 VDGIDADAASAEFWQLGVENMYQIAAAHGRGVTALIELALNPFAEKLLDESKGELEDLTE 179

Query: 161 IE-----LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            E     L Y +   ++EFT +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 FEDEEEKLDYSEEEAEEEFTRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 238

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA+
Sbjct: 239 TTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVLLVIDAR 298

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           +NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FISA
Sbjct: 299 ENISDQDLSLLGFALNAGRSIVIAVNKWDGLDMDVKEHVKKELDRRLGFVDFARIHFISA 358

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ES+   Y S+   + TS +TR +  A ++H P   +  R KL+YAH GG 
Sbjct: 359 LHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAGGY 418

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++  + + YKRYL  YF ++  ++
Sbjct: 419 NPPIVVIHGNQVNDLPDSYKRYLMNYFRKSLEIM 452


>gi|33597413|ref|NP_885056.1| hypothetical protein BPP2857 [Bordetella parapertussis 12822]
 gi|81579190|sp|Q7W6P5.1|RLMN_BORPA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|33573840|emb|CAE38149.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 382

 Score =  405 bits (1040), Expect = e-109,   Method: Composition-based stats.
 Identities = 192/347 (55%), Positives = 251/347 (72%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWVHQRGADSFDAMTDLARDFRAQLARDCVIEALPVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLRASEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGK-----RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L    +      GK     R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEAAADTARLPGGKAGEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+Q+CP+ LAVSLHA N+ LR++LVP+++KYPL  L+ 
Sbjct: 200 AYGLSRRRVTVSTSGVVPMMDRLSQDCPLALAVSLHAPNDALRDELVPLNRKYPLNALLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+++FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPSARVRVFAQRLMDAGIVTTVRKTRGDDIDAACGQLAGEVRD 362


>gi|440286602|ref|YP_007339367.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
           strain FGI 57]
 gi|440046124|gb|AGB77182.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
           strain FGI 57]
          Length = 492

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/455 (44%), Positives = 301/455 (66%), Gaps = 30/455 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M +Q+  AI E+D+++F+VD R GL+  DK I   LR   +P  LV NK
Sbjct: 61  D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADKAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
           ++ +++  ++ DF+ LG+G+ + I+A +G G+ + LE++L   LP+              
Sbjct: 120 TDGVDADQAIADFWSLGLGDIYPIAASHGRGVTSLLEHVL---LPFVDDVNPPEEVDEDA 176

Query: 166 ---KKFFKKKEFTNIHSIE--------YIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
               KF  ++    +   E         IK+AIVG+PNVGKSTL N +LGE+RV+ YD P
Sbjct: 177 EYWAKFEAEQNGEPLEEPEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMP 236

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    + + ++Y+LIDTAG+R+R K  +V+EKFSVIKTL++I +ANVV+L++DA
Sbjct: 237 GTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDANVVLLVIDA 296

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++ IS QD+++  FI  SGRSL++ VNKWD + +  R+ +K  +  +L F+ FA  +FIS
Sbjct: 297 REGISDQDLSLLGFILNSGRSLVIVVNKWDGLSNEVREQVKETLDYRLGFIDFARVHFIS 356

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+  + + +  ES+   YDSS   + T+ +TR +  A+++H P   +  R KL+YAH GG
Sbjct: 357 ALHGSGVGNLFESVREAYDSSTRRVGTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGG 416

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 417 YNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 451


>gi|56480123|ref|NP_708350.2| GTP-binding protein Der [Shigella flexneri 2a str. 301]
 gi|161984887|ref|YP_408907.2| GTP-binding protein EngA [Shigella boydii Sb227]
 gi|56383674|gb|AAN44057.2| putative GTP-binding factor [Shigella flexneri 2a str. 301]
          Length = 490

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV+NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|120554059|ref|YP_958410.1| GTP-binding protein EngA [Marinobacter aquaeolei VT8]
 gi|387814562|ref|YP_005430048.1| ribosome synthesis and maintenance GTPase [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
 gi|166225823|sp|A1TZQ4.1|DER_MARAV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|120323908|gb|ABM18223.1| small GTP-binding protein [Marinobacter aquaeolei VT8]
 gi|381339578|emb|CCG95625.1| GTPase involved in ribosome synthesis and maintenance [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
          Length = 473

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/432 (44%), Positives = 292/432 (67%), Gaps = 8/432 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN++T SRDALVA++PGLTRDR YGEG    + FI+IDTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGNYEGQKFIVIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI  EM +Q+ QA+ E+DI++F+VDGR GL   D++I ++LRKSG+   LV+NK
Sbjct: 61  TGD-EAGIDAEMARQSMQAVEEADIVLFLVDGRAGLTAGDEMIADYLRKSGKQAHLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++  +  ++  DFY LG  +  +I+A +  GI + LE +L    P  +  + ++  + + 
Sbjct: 120 TDGQDPDVAAADFYSLGFESTFLIAAAHNRGILSLLEALL----PEPENPEDQDRADRYP 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++ +VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+   +E    +Y LIDTAG
Sbjct: 176 --GIRIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYERQGHEYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E +EKFS+IKTL++I +A+VVIL++DA++ +  QD+++  F+ ++GRSL++ 
Sbjct: 234 VRRRKNVREAVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    R  +K  + ++L+FL +A   +ISA+    + +  ES+   Y+S++   
Sbjct: 294 INKWDGMDPEDRDRVKEQVARRLDFLDYADKYYISALHGTGVGTMYESVQACYESAMSKW 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T+R+T  L  A+  H P      R KLRYAHQGG NPP++V+HGN++  +   YKRYLE
Sbjct: 354 PTNRLTAILQDAVAQHQPPMVHGRRIKLRYAHQGGSNPPVVVVHGNQVDSLPGAYKRYLE 413

Query: 420 KYFYRTFSLIDA 431
             F +   ++ A
Sbjct: 414 NTFRKVLKVVGA 425


>gi|205353618|ref|YP_002227419.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|375124468|ref|ZP_09769632.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Gallinarum str. SG9]
 gi|445136906|ref|ZP_21383589.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9184]
 gi|238690507|sp|B5RCY8.1|DER_SALG2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|205273399|emb|CAR38374.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628718|gb|EGE35061.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Gallinarum str. SG9]
 gi|444844672|gb|ELX69902.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9184]
          Length = 490

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/450 (44%), Positives = 297/450 (66%), Gaps = 22/450 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   +    P ++  +  E+ 
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEEVDEDAEYW 179

Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
               +E                 IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 180 AQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 239

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 299

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA+  +
Sbjct: 300 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 359

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
           ++ +  ES+   YDSS   +ST+ +TR +  A+++H P   +  R KL+YAH GG NPPI
Sbjct: 360 DVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 419

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 420 VVIHGNQVKDLPDSYKRYLMNYFRKSLEVM 449


>gi|88799909|ref|ZP_01115481.1| predicted GTPase [Reinekea blandensis MED297]
 gi|88777340|gb|EAR08543.1| predicted GTPase [Reinekea sp. MED297]
          Length = 458

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/429 (44%), Positives = 286/429 (66%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNR T +RDALVA++ GLTRDR YG+G +G++ FI+IDTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNRFTRTRDALVADWSGLTRDRKYGDGKLGERPFIVIDTGGV 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
               ++G+   M +Q+  AI E+D ++F+VDG+ G+   D  +   LRK+ + + LV+NK
Sbjct: 61  S-GFEEGLDEAMARQSFAAIDEADAVLFLVDGQSGITSADSFLAEHLRKTQKSVTLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++  +  +++ DFYELG+G P  I+A    G+++ LE++L      ++F +  E  +   
Sbjct: 120 TDGRDPDVAVADFYELGLGEPVAIAASQNRGVRSLLEDVL------EQFPEPIEQIDPME 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I++AI+G+PNVGKSTL+N +LGE+RV+ YD PGTT DSI   +E + K Y LIDTAG
Sbjct: 174 DDSIRLAIIGRPNVGKSTLVNRMLGEDRVVVYDHPGTTMDSIYIPYERHGKAYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E +EKFS++KTL++I +ANVV+L++DAQ  +  QD+++  F  ESGR+L++ 
Sbjct: 234 VRRRKNITEAVEKFSIVKTLQAIQDANVVVLVIDAQDGLVDQDMHMLGFALESGRALVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   ++  IK  I +++ FL +A  +FISA+   N+    ES+   YD +    
Sbjct: 294 INKWDGLSEEKKDSIKTAIDRRMPFLDWADMHFISALHGTNVGHLYESVEEAYDGARSKW 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ +T  +   ++ H P      R KLRYAHQGG NPPI+VIHGN+L  +   YKRYLE
Sbjct: 354 STNHLTNLMQGVVEMHQPPMVGGRRIKLRYAHQGGSNPPIVVIHGNQLNKLPGSYKRYLE 413

Query: 420 KYFYRTFSL 428
             F +   +
Sbjct: 414 NAFRKAMGV 422


>gi|358450419|ref|ZP_09160882.1| GTP-binding protein EngA [Marinobacter manganoxydans MnI7-9]
 gi|357225350|gb|EHJ03852.1| GTP-binding protein EngA [Marinobacter manganoxydans MnI7-9]
          Length = 473

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/429 (45%), Positives = 291/429 (67%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN++T SRDALVA++PGLTRDR YGEG    + FI+IDTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGSYEGQRFIVIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++G+  EM +Q+ QA+ E+DI++F+VDGR GL   D+LI + LR+SG+   LV+NK
Sbjct: 61  TGD-EQGLDLEMARQSMQAVEEADIVLFLVDGRAGLTAGDELIADSLRRSGKQARLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++  +  I+  DFY LG  +  +I+A +  GI++ LE +L  E   ++  +   +  I  
Sbjct: 120 TDGQDPDIAASDFYSLGFESTFLIAASHNRGIRSMLEILLPSEEEREEEDRADRYPGI-- 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               ++ +VG+PNVGKSTL+N +LGE RV+ YD PGTTRDS+   +E    +Y LIDTAG
Sbjct: 178 ----RIGVVGRPNVGKSTLVNRMLGEERVVVYDMPGTTRDSVHIPYERQGSQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    EV+EKFS+IKTL++I +A+VVIL++DA++ +  QD+++  F+ ++GRSL++ 
Sbjct: 234 VRRRKNVSEVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    R  +K  ++++L+FL +A  ++ISA+  + +    ES+   Y+S++   
Sbjct: 294 VNKWDGMDPEDRARVKEQVQRRLDFLDYADKHYISALHGSGVGVMYESVQACYESAMAKW 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T+R+T  L  AI  H P      R KLRYAHQGG NPP+IV+HGN++  +   YKRYLE
Sbjct: 354 PTNRLTAILQDAIAQHQPPMVHGRRIKLRYAHQGGSNPPVIVVHGNQVDSLPGAYKRYLE 413

Query: 420 KYFYRTFSL 428
             F +   +
Sbjct: 414 NTFRKVLKV 422


>gi|417690635|ref|ZP_12339855.1| small GTP-binding domain protein [Shigella boydii 5216-82]
 gi|332087958|gb|EGI93083.1| small GTP-binding domain protein [Shigella boydii 5216-82]
          Length = 490

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/456 (44%), Positives = 296/456 (64%), Gaps = 30/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDA 431
           NPPI+VIHGN++K + + YKRYL  YF ++  ++ A
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGA 451


>gi|170767411|ref|ZP_02901864.1| GTP-binding protein EngA [Escherichia albertii TW07627]
 gi|170123745|gb|EDS92676.1| GTP-binding protein EngA [Escherichia albertii TW07627]
          Length = 499

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE +L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLERVL---LPWMEELAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE+RV+ YD PG
Sbjct: 185 AEYWAQFEAQENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|420321401|ref|ZP_14823229.1| GTPase Der [Shigella flexneri 2850-71]
 gi|391247472|gb|EIQ06721.1| GTPase Der [Shigella flexneri 2850-71]
          Length = 490

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/454 (45%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  +V+EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|30063903|ref|NP_838074.1| GTP-binding protein EngA [Shigella flexneri 2a str. 2457T]
 gi|110806442|ref|YP_689962.1| GTP-binding protein EngA [Shigella flexneri 5 str. 8401]
 gi|384544127|ref|YP_005728190.1| GTP-binding protein engA [Shigella flexneri 2002017]
 gi|415853751|ref|ZP_11529681.1| small GTP-binding domain protein [Shigella flexneri 2a str. 2457T]
 gi|417703044|ref|ZP_12352155.1| small GTP-binding domain protein [Shigella flexneri K-218]
 gi|417724132|ref|ZP_12372936.1| small GTP-binding domain protein [Shigella flexneri K-304]
 gi|417729436|ref|ZP_12378134.1| small GTP-binding domain protein [Shigella flexneri K-671]
 gi|417734231|ref|ZP_12382882.1| small GTP-binding domain protein [Shigella flexneri 2747-71]
 gi|417739382|ref|ZP_12387961.1| small GTP-binding domain protein [Shigella flexneri 4343-70]
 gi|417744403|ref|ZP_12392929.1| small GTP-binding domain protein [Shigella flexneri 2930-71]
 gi|418257516|ref|ZP_12881184.1| small GTP-binding domain protein [Shigella flexneri 6603-63]
 gi|420342837|ref|ZP_14844310.1| GTPase Der [Shigella flexneri K-404]
 gi|424838837|ref|ZP_18263474.1| GTP-binding protein EngA [Shigella flexneri 5a str. M90T]
 gi|123146827|sp|Q0T208.1|DER_SHIF8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|30042158|gb|AAP17884.1| putative GTP-binding factor [Shigella flexneri 2a str. 2457T]
 gi|110615990|gb|ABF04657.1| putative GTP-binding factor [Shigella flexneri 5 str. 8401]
 gi|281601913|gb|ADA74897.1| GTP-binding protein engA [Shigella flexneri 2002017]
 gi|313650997|gb|EFS15397.1| small GTP-binding domain protein [Shigella flexneri 2a str. 2457T]
 gi|332754198|gb|EGJ84566.1| small GTP-binding domain protein [Shigella flexneri 4343-70]
 gi|332755561|gb|EGJ85925.1| small GTP-binding domain protein [Shigella flexneri K-671]
 gi|332756305|gb|EGJ86656.1| small GTP-binding domain protein [Shigella flexneri 2747-71]
 gi|332766344|gb|EGJ96554.1| small GTP-binding domain protein [Shigella flexneri 2930-71]
 gi|333001904|gb|EGK21470.1| small GTP-binding domain protein [Shigella flexneri K-218]
 gi|333016427|gb|EGK35758.1| small GTP-binding domain protein [Shigella flexneri K-304]
 gi|383467889|gb|EID62910.1| GTP-binding protein EngA [Shigella flexneri 5a str. M90T]
 gi|391265910|gb|EIQ24877.1| GTPase Der [Shigella flexneri K-404]
 gi|397897138|gb|EJL13549.1| small GTP-binding domain protein [Shigella flexneri 6603-63]
          Length = 490

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV+NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|336451633|ref|ZP_08622070.1| ribosome-associated GTPase EngA [Idiomarina sp. A28L]
 gi|336281446|gb|EGN74726.1| ribosome-associated GTPase EngA [Idiomarina sp. A28L]
          Length = 483

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/445 (44%), Positives = 296/445 (66%), Gaps = 17/445 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+G+  +  F+++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTQSRDALVADFPGLTRDRQYGQGHYEEYKFVVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++G+   M +Q+ QA+ E+D+++F+VD R G+   D+ I ++LRK  + I LV+NK
Sbjct: 61  HGK-EEGLDLMMARQSLQAVDEADVVLFLVDARDGITAADEFIADYLRKQNKKIHLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLE---NILTIELP----YKKFFKKK 172
            + I+  + S DF+ LG+G    I+A +G G+   L+   + L  E P     ++  +  
Sbjct: 120 VDGIDGNAASADFFSLGLGEIWQIAAAHGRGVTQLLQATLDPLANEFPDMLANEEQTEAT 179

Query: 173 EFTNIHS--------IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
           E T   +         + IK+AI+G+PNVGKSTL N +LGE RV+ +D PGTTRDS+   
Sbjct: 180 ELTEADAEAEIARLQAQPIKLAIIGRPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIP 239

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
            E   ++Y+LIDTAG+RRR +    IEK+SV+KTL++I  ANVVIL++DA++ IS QD+N
Sbjct: 240 MEREGREYVLIDTAGVRRRGRIDMAIEKYSVVKTLQAIESANVVILVIDARETISDQDLN 299

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+  +GRS+++ VNKWD + ++ R+ IK  + ++L F+ FA  +FISA+   N+   
Sbjct: 300 LLGFVLNAGRSVVIAVNKWDGLDNDAREWIKTELDRRLGFVDFARLHFISALHGTNVGHL 359

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            ES+   Y S+   +ST+++TR + SA   H P   +  R KL++AH GG NPP+IV+HG
Sbjct: 360 FESVQEAYASATQRVSTAQLTRIMESAQDEHQPPLVRGRRVKLKFAHAGGYNPPLIVVHG 419

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  + N YKRYL  YF R+  L+
Sbjct: 420 NQVTDLPNSYKRYLINYFRRSLKLM 444


>gi|81246371|gb|ABB67079.1| putative GTP-binding factor [Shigella boydii Sb227]
          Length = 503

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 14  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV+NK
Sbjct: 74  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVVNK 132

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 462


>gi|419701355|ref|ZP_14228956.1| GTP-binding protein Der [Escherichia coli SCI-07]
 gi|380347556|gb|EIA35843.1| GTP-binding protein Der [Escherichia coli SCI-07]
          Length = 490

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGETYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|207857927|ref|YP_002244578.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|378954146|ref|YP_005211633.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Gallinarum/pullorum str. RKS5078]
 gi|421357052|ref|ZP_15807365.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 622731-39]
 gi|421361378|ref|ZP_15811642.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 639016-6]
 gi|421367131|ref|ZP_15817332.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 640631]
 gi|421372689|ref|ZP_15822837.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 77-0424]
 gi|421375733|ref|ZP_15825845.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607307-6]
 gi|421381049|ref|ZP_15831105.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 485549-17]
 gi|421383731|ref|ZP_15833762.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 596866-22]
 gi|421388658|ref|ZP_15838646.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 596866-70]
 gi|421396293|ref|ZP_15846224.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 629164-26]
 gi|421401586|ref|ZP_15851461.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 629164-37]
 gi|421402012|ref|ZP_15851876.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 639672-46]
 gi|421408909|ref|ZP_15858706.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 639672-50]
 gi|421413715|ref|ZP_15863467.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 77-1427]
 gi|421415477|ref|ZP_15865203.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 77-2659]
 gi|421423614|ref|ZP_15873269.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 78-1757]
 gi|421424838|ref|ZP_15874476.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 22510-1]
 gi|421429356|ref|ZP_15878953.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 8b-1]
 gi|421437188|ref|ZP_15886710.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648905 5-18]
 gi|421437856|ref|ZP_15887366.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648901 6-18]
 gi|421446296|ref|ZP_15895712.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 50-3079]
 gi|421449722|ref|ZP_15899104.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 58-6482]
 gi|436592281|ref|ZP_20512135.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 22704]
 gi|436720342|ref|ZP_20518985.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SE30663]
 gi|436802860|ref|ZP_20525559.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CHS44]
 gi|436811038|ref|ZP_20530034.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1882]
 gi|436817151|ref|ZP_20534233.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1884]
 gi|436845485|ref|ZP_20538812.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1594]
 gi|436853350|ref|ZP_20543310.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1566]
 gi|436859561|ref|ZP_20547474.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1580]
 gi|436863732|ref|ZP_20550027.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1543]
 gi|436868432|ref|ZP_20553192.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1441]
 gi|436882800|ref|ZP_20561425.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1810]
 gi|436887158|ref|ZP_20563558.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1558]
 gi|436898925|ref|ZP_20570560.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1018]
 gi|436901136|ref|ZP_20572060.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1010]
 gi|436909409|ref|ZP_20576133.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1729]
 gi|436921344|ref|ZP_20583747.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_0895]
 gi|436930037|ref|ZP_20588548.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_0899]
 gi|436938069|ref|ZP_20592981.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1457]
 gi|436945334|ref|ZP_20597488.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1747]
 gi|436949498|ref|ZP_20599479.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_0968]
 gi|436960756|ref|ZP_20604393.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1444]
 gi|436974659|ref|ZP_20611158.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1445]
 gi|436983922|ref|ZP_20614242.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1559]
 gi|436991126|ref|ZP_20617305.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1565]
 gi|437007427|ref|ZP_20623280.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1808]
 gi|437016652|ref|ZP_20626068.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1811]
 gi|437033320|ref|ZP_20632514.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_0956]
 gi|437037924|ref|ZP_20634334.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1455]
 gi|437049630|ref|ZP_20640222.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1575]
 gi|437054928|ref|ZP_20643228.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1725]
 gi|437066399|ref|ZP_20649477.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1745]
 gi|437072818|ref|ZP_20652660.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1791]
 gi|437080640|ref|ZP_20657190.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1795]
 gi|437088897|ref|ZP_20661802.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 576709]
 gi|437111626|ref|ZP_20668213.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 635290-58]
 gi|437118558|ref|ZP_20670392.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607308-16]
 gi|437133441|ref|ZP_20678414.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607308-19]
 gi|437139483|ref|ZP_20681816.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607307-2]
 gi|437143575|ref|ZP_20684399.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607308-9]
 gi|437149977|ref|ZP_20688487.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 629163]
 gi|437160247|ref|ZP_20694523.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SE15-1]
 gi|437172210|ref|ZP_20701008.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_N202]
 gi|437180349|ref|ZP_20706072.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_56-3991]
 gi|437185731|ref|ZP_20709152.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_76-3618]
 gi|437206835|ref|ZP_20712561.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 13183-1]
 gi|437262195|ref|ZP_20718915.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_81-2490]
 gi|437270383|ref|ZP_20723179.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SL909]
 gi|437275164|ref|ZP_20725710.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SL913]
 gi|437284182|ref|ZP_20729435.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_69-4941]
 gi|437315440|ref|ZP_20737129.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 638970-15]
 gi|437330761|ref|ZP_20741788.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 17927]
 gi|437336088|ref|ZP_20742910.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CHS4]
 gi|437377378|ref|ZP_20750033.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 22558]
 gi|437420452|ref|ZP_20754626.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 543463 22-17]
 gi|437439224|ref|ZP_20757164.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 543463 40-18]
 gi|437461317|ref|ZP_20762266.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 561362 1-1]
 gi|437472198|ref|ZP_20765433.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 642044 4-1]
 gi|437489924|ref|ZP_20770706.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 642046 4-7]
 gi|437510812|ref|ZP_20776890.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648898 4-5]
 gi|437524983|ref|ZP_20779550.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648899 3-17]
 gi|437549555|ref|ZP_20783354.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648900 1-16]
 gi|437576694|ref|ZP_20790765.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648901 1-17]
 gi|437593485|ref|ZP_20795418.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648901 39-2]
 gi|437606108|ref|ZP_20799642.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648902 6-8]
 gi|437613330|ref|ZP_20801514.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648903 1-6]
 gi|437627607|ref|ZP_20805890.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648904 3-6]
 gi|437662554|ref|ZP_20813519.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 653049 13-19]
 gi|437676517|ref|ZP_20816978.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 642044 8-1]
 gi|437695098|ref|ZP_20822068.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 561362 9-7]
 gi|437713639|ref|ZP_20827519.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 543463 42-20]
 gi|437721448|ref|ZP_20829066.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648901 16-16]
 gi|437753120|ref|ZP_20834008.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 76-2651]
 gi|437814545|ref|ZP_20842367.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 33944]
 gi|437868880|ref|ZP_20848283.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 6.0562-1]
 gi|437991323|ref|ZP_20853795.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 50-5646]
 gi|438082436|ref|ZP_20857781.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 81-2625]
 gi|438100707|ref|ZP_20863974.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 62-1976]
 gi|438109160|ref|ZP_20867223.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 53-407]
 gi|438131971|ref|ZP_20873738.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Pullorum str. ATCC 9120]
 gi|445173601|ref|ZP_21396742.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SE8a]
 gi|445191687|ref|ZP_21399861.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 20037]
 gi|445232243|ref|ZP_21406014.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SE10]
 gi|445275219|ref|ZP_21410555.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 436]
 gi|445334897|ref|ZP_21415277.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 18569]
 gi|445344441|ref|ZP_21417617.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 13-1]
 gi|445361956|ref|ZP_21424019.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. PT23]
 gi|238690463|sp|B5R578.1|DER_SALEP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|206709730|emb|CAR34082.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|357204757|gb|AET52803.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Gallinarum/pullorum str. RKS5078]
 gi|395988763|gb|EJH97909.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 640631]
 gi|395992354|gb|EJI01472.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 622731-39]
 gi|395993381|gb|EJI02476.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 639016-6]
 gi|395999605|gb|EJI08623.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 77-0424]
 gi|396002143|gb|EJI11148.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 485549-17]
 gi|396004648|gb|EJI13630.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607307-6]
 gi|396009902|gb|EJI18817.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 629164-26]
 gi|396019641|gb|EJI28493.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 596866-70]
 gi|396020968|gb|EJI29801.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 596866-22]
 gi|396021114|gb|EJI29945.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 629164-37]
 gi|396026468|gb|EJI35235.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 639672-50]
 gi|396033288|gb|EJI41998.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 639672-46]
 gi|396036335|gb|EJI44996.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 78-1757]
 gi|396038856|gb|EJI47490.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 77-1427]
 gi|396047714|gb|EJI56285.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 77-2659]
 gi|396050613|gb|EJI59136.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648905 5-18]
 gi|396058920|gb|EJI67379.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 8b-1]
 gi|396059013|gb|EJI67471.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 22510-1]
 gi|396063225|gb|EJI71626.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 50-3079]
 gi|396069230|gb|EJI77570.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 58-6482]
 gi|396075029|gb|EJI83306.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648901 6-18]
 gi|434941368|gb|ELL47819.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Pullorum str. ATCC 9120]
 gi|434956964|gb|ELL50646.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CHS44]
 gi|434964569|gb|ELL57567.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1882]
 gi|434971600|gb|ELL64103.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1884]
 gi|434978454|gb|ELL70487.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1594]
 gi|434978685|gb|ELL70682.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 22704]
 gi|434984079|gb|ELL75840.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1566]
 gi|434984211|gb|ELL75955.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SE30663]
 gi|434987721|gb|ELL79353.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1580]
 gi|434997215|gb|ELL88480.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1543]
 gi|435003002|gb|ELL94041.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1810]
 gi|435004114|gb|ELL95107.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1441]
 gi|435011061|gb|ELM01798.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1558]
 gi|435013341|gb|ELM03995.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1018]
 gi|435021717|gb|ELM12085.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1010]
 gi|435025438|gb|ELM15586.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_0895]
 gi|435028833|gb|ELM18893.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1729]
 gi|435032861|gb|ELM22784.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_0899]
 gi|435034520|gb|ELM24389.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1457]
 gi|435036112|gb|ELM25934.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1747]
 gi|435052567|gb|ELM42058.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1444]
 gi|435052662|gb|ELM42150.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1445]
 gi|435053252|gb|ELM42705.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_0968]
 gi|435064565|gb|ELM53692.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1559]
 gi|435068649|gb|ELM57660.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1808]
 gi|435068836|gb|ELM57846.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1565]
 gi|435077334|gb|ELM66089.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_0956]
 gi|435082634|gb|ELM71246.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1811]
 gi|435087924|gb|ELM76397.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1455]
 gi|435096074|gb|ELM84348.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1575]
 gi|435098295|gb|ELM86538.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1745]
 gi|435099276|gb|ELM87487.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1725]
 gi|435109502|gb|ELM97449.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1791]
 gi|435112294|gb|ELN00163.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CDC_2010K_1795]
 gi|435116320|gb|ELN04066.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 576709]
 gi|435118035|gb|ELN05716.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 635290-58]
 gi|435120671|gb|ELN08236.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607308-19]
 gi|435131371|gb|ELN18584.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607307-2]
 gi|435132094|gb|ELN19295.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607308-16]
 gi|435139660|gb|ELN26643.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 607308-9]
 gi|435145210|gb|ELN32034.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_N202]
 gi|435147161|gb|ELN33940.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 629163]
 gi|435147664|gb|ELN34421.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SE15-1]
 gi|435149141|gb|ELN35854.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_56-3991]
 gi|435159282|gb|ELN45634.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_76-3618]
 gi|435162120|gb|ELN48316.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_81-2490]
 gi|435171114|gb|ELN56757.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SL909]
 gi|435175087|gb|ELN60515.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SL913]
 gi|435180905|gb|ELN66005.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 638970-15]
 gi|435186169|gb|ELN71018.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CVM_69-4941]
 gi|435189371|gb|ELN74005.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 17927]
 gi|435197804|gb|ELN82060.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. CHS4]
 gi|435201130|gb|ELN85062.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 543463 22-17]
 gi|435204105|gb|ELN87817.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 22558]
 gi|435206324|gb|ELN89863.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 13183-1]
 gi|435212618|gb|ELN95587.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 543463 40-18]
 gi|435220375|gb|ELO02672.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 561362 1-1]
 gi|435226430|gb|ELO08008.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 642044 4-1]
 gi|435231134|gb|ELO12392.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 642046 4-7]
 gi|435231954|gb|ELO13099.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648898 4-5]
 gi|435243387|gb|ELO23653.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648901 1-17]
 gi|435246738|gb|ELO26728.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648900 1-16]
 gi|435248684|gb|ELO28540.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648899 3-17]
 gi|435251799|gb|ELO31397.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648901 39-2]
 gi|435256377|gb|ELO35686.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648902 6-8]
 gi|435264585|gb|ELO43497.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648903 1-6]
 gi|435267465|gb|ELO46163.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 653049 13-19]
 gi|435276254|gb|ELO54266.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 642044 8-1]
 gi|435278051|gb|ELO55927.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 561362 9-7]
 gi|435285831|gb|ELO63193.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648904 3-6]
 gi|435286583|gb|ELO63836.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 543463 42-20]
 gi|435294467|gb|ELO71100.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648901 16-16]
 gi|435295610|gb|ELO72059.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 33944]
 gi|435311372|gb|ELO85549.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 76-2651]
 gi|435320625|gb|ELO93192.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 81-2625]
 gi|435324978|gb|ELO96871.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 62-1976]
 gi|435332737|gb|ELP03640.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 53-407]
 gi|435335300|gb|ELP05566.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 6.0562-1]
 gi|435336745|gb|ELP06553.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 50-5646]
 gi|444859841|gb|ELX84777.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SE8a]
 gi|444862593|gb|ELX87441.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. SE10]
 gi|444867875|gb|ELX92548.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 20037]
 gi|444874989|gb|ELX99221.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 18569]
 gi|444880202|gb|ELY04282.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 13-1]
 gi|444884402|gb|ELY08235.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. PT23]
 gi|444887705|gb|ELY11395.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 436]
          Length = 490

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/450 (44%), Positives = 296/450 (65%), Gaps = 22/450 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   +    P ++  +  E+ 
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEEVDEDAEYW 179

Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
               +E                 IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 180 AQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 239

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 299

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA+  +
Sbjct: 300 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 359

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            + +  ES+   YDSS   +ST+ +TR +  A+++H P   +  R KL+YAH GG NPPI
Sbjct: 360 GVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 419

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 420 VVIHGNQVKDLPDSYKRYLMNYFRKSLEVM 449


>gi|241764492|ref|ZP_04762513.1| radical SAM enzyme, Cfr family [Acidovorax delafieldii 2AN]
 gi|241366076|gb|EER60673.1| radical SAM enzyme, Cfr family [Acidovorax delafieldii 2AN]
          Length = 373

 Score =  404 bits (1038), Expect = e-109,   Method: Composition-based stats.
 Identities = 185/340 (54%), Positives = 256/340 (75%), Gaps = 7/340 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF+ M+DL+++LR KLK   +++A  ++S+ +S DGT 
Sbjct: 19  QLGEKRFRATQLFRWIHQRGASDFDAMSDLAVALRTKLKGCAFVQALPVISEHVSADGTV 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E+VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNLT GEI+ QL
Sbjct: 79  KWLFDVGDGNAVESVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLTTGEIVAQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+    ++ +Q  R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR 
Sbjct: 139 WFAEHALRK----RLATQ-SRVISNVVMMGMGEPLQNYTALVPALRVMLDDHGYGLSRRR 193

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR+ LVP+++KYPL+EL+ AC RY+ +
Sbjct: 194 VTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDNLVPLNRKYPLEELLDACRRYLEH 253

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNK-ILTSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI+L+   + +   CK NLIPFN FP S L+ S +
Sbjct: 254 APRDFITFEYCMLDGVNDQVEHARQLIALVNPAQGVPIRCKFNLIPFNPFPASGLLRSPS 313

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +++ +FAK+L ++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 314 AQVAMFAKVLSDAGIVTTVRKTRGDDIDAACGQLAGDVKD 353


>gi|301024743|ref|ZP_07188383.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1]
 gi|300396412|gb|EFJ79950.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1]
          Length = 499

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +  + ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQDVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|419920349|ref|ZP_14438467.1| GTP-binding protein EngA [Escherichia coli KD2]
 gi|388384881|gb|EIL46587.1| GTP-binding protein EngA [Escherichia coli KD2]
          Length = 490

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +  + ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQDVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|432393023|ref|ZP_19635853.1| GTPase Der [Escherichia coli KTE21]
 gi|430918179|gb|ELC39218.1| GTPase Der [Escherichia coli KTE21]
          Length = 490

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|417342951|ref|ZP_12123630.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Baildon str. R6-199]
 gi|357955994|gb|EHJ81605.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Baildon str. R6-199]
          Length = 504

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/450 (44%), Positives = 296/450 (65%), Gaps = 22/450 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI IDTGG 
Sbjct: 15  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 74

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 75  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 133

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   +    P ++  +  E+ 
Sbjct: 134 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEEVDEDAEYW 193

Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
               +E                 IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 194 AQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 253

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 254 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 313

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA+  +
Sbjct: 314 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 373

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            + +  ES+   YDSS   +ST+ +TR +  A+++H P   +  R KL+YAH GG NPPI
Sbjct: 374 GVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 433

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 434 VVIHGNQVKDLPDSYKRYLMNYFRKSLEVM 463


>gi|62181086|ref|YP_217503.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224582944|ref|YP_002636742.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|375115427|ref|ZP_09760597.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SCSA50]
 gi|81309623|sp|Q57LJ0.1|DER_SALCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|254783165|sp|C0PYN4.1|DER_SALPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|62128719|gb|AAX66422.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224467471|gb|ACN45301.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322715573|gb|EFZ07144.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SCSA50]
          Length = 490

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/450 (44%), Positives = 295/450 (65%), Gaps = 22/450 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   +    P +K  +  E+ 
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEKVDEDAEYW 179

Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
                E                 IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 180 AQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 239

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 299

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA+  +
Sbjct: 300 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 359

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            + +  ES+   YDSS   +ST+ +TR +  A+++H P   +  R KL+YAH GG NPPI
Sbjct: 360 GVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 419

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 420 VVIHGNQVKDLPDSYKRYLMNYFRKSLEVM 449


>gi|432486293|ref|ZP_19728208.1| GTPase Der [Escherichia coli KTE212]
 gi|433174413|ref|ZP_20358935.1| GTPase Der [Escherichia coli KTE232]
 gi|431015502|gb|ELD29057.1| GTPase Der [Escherichia coli KTE212]
 gi|431691625|gb|ELJ57083.1| GTPase Der [Escherichia coli KTE232]
          Length = 490

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|215487861|ref|YP_002330292.1| GTP-binding protein EngA [Escherichia coli O127:H6 str. E2348/69]
 gi|254783152|sp|B7UGV7.1|DER_ECO27 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|215265933|emb|CAS10342.1| predicted GTP-binding protein [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 490

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLSDSYKRYLMNYFRKSLDVM 449


>gi|300904315|ref|ZP_07122172.1| ribosome-associated GTPase EngA, partial [Escherichia coli MS 84-1]
 gi|300403747|gb|EFJ87285.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1]
          Length = 492

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|345875081|ref|ZP_08826877.1| ribosomal RNA large subunit methyltransferase N [Neisseria weaveri
           LMG 5135]
 gi|343969508|gb|EGV37720.1| ribosomal RNA large subunit methyltransferase N [Neisseria weaveri
           LMG 5135]
          Length = 362

 Score =  404 bits (1037), Expect = e-109,   Method: Composition-based stats.
 Identities = 190/343 (55%), Positives = 244/343 (71%), Gaps = 11/343 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE PFRAKQ+ +WIH+ G SDF +MTDL+ SLR KL+    I  P +M+ QIS DGTRK
Sbjct: 20  MGEKPFRAKQVLRWIHQGGASDFAEMTDLAKSLRSKLEEKAEIAVPELMTSQISSDGTRK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQLW
Sbjct: 80  WLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
                    K + +  + +R I+N+VMMGMGEPL N+ + + AL ++L DH YGLSRR V
Sbjct: 140 WAN------KAMGVTPKNERVISNVVMMGMGEPLANFDNVVTALSIMLDDHGYGLSRRRV 193

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++P +D+L +  PV LAVSLHASN+ +R+++VP++KKYPL+EL+ AC RY+  +
Sbjct: 194 TVSTSGMVPQMDRLKEVMPVALAVSLHASNDEVRDEIVPLNKKYPLRELMAACQRYLVKA 253

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEY ML G+ND   HA ELI L++       CK NLIPFN FPNS    S N  
Sbjct: 254 PRDFITFEYVMLDGVNDKPQHAYELIELVKD----VPCKFNLIPFNPFPNSGYERSSNEN 309

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
           I+IF  IL  +G+ VT+RK RG+DI+AACGQL+G+  D  K++
Sbjct: 310 IRIFRDILQQAGLVVTVRKTRGDDIDAACGQLAGQVQDKTKRQ 352


>gi|218548052|ref|YP_002381843.1| GTP-binding protein EngA [Escherichia fergusonii ATCC 35469]
 gi|331684159|ref|ZP_08384755.1| ribosome-associated GTPase EngA [Escherichia coli H299]
 gi|416898704|ref|ZP_11928250.1| small GTP-binding domain protein [Escherichia coli STEC_7v]
 gi|417115520|ref|ZP_11966656.1| ribosome-associated GTPase EngA [Escherichia coli 1.2741]
 gi|422799824|ref|ZP_16848323.1| ribosome GTPase EngA [Escherichia coli M863]
 gi|450191393|ref|ZP_21891202.1| GTP-binding protein Der [Escherichia coli SEPT362]
 gi|226741141|sp|B7LKC7.1|DER_ESCF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|218355593|emb|CAQ88204.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
           fergusonii ATCC 35469]
 gi|323967959|gb|EGB63371.1| ribosome GTPase EngA [Escherichia coli M863]
 gi|327252218|gb|EGE63890.1| small GTP-binding domain protein [Escherichia coli STEC_7v]
 gi|331079111|gb|EGI50313.1| ribosome-associated GTPase EngA [Escherichia coli H299]
 gi|386140939|gb|EIG82091.1| ribosome-associated GTPase EngA [Escherichia coli 1.2741]
 gi|449319540|gb|EMD09589.1| GTP-binding protein Der [Escherichia coli SEPT362]
          Length = 490

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|419921567|ref|ZP_14439619.1| GTP-binding protein EngA [Escherichia coli 541-15]
 gi|432534832|ref|ZP_19771804.1| GTPase Der [Escherichia coli KTE234]
 gi|388397518|gb|EIL58496.1| GTP-binding protein EngA [Escherichia coli 541-15]
 gi|431059587|gb|ELD68940.1| GTPase Der [Escherichia coli KTE234]
          Length = 490

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAACHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|358635845|dbj|BAL23142.1| Fe-S cluster redox protein [Azoarcus sp. KH32C]
          Length = 377

 Score =  404 bits (1037), Expect = e-109,   Method: Composition-based stats.
 Identities = 188/349 (53%), Positives = 245/349 (70%), Gaps = 11/349 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E GE PFRA+Q+  W+H+FG +DF+ MTD++ SLR KL     I+ P  + D +S DGTR
Sbjct: 21  ERGEKPFRARQVMHWMHRFGETDFDAMTDVAKSLRAKLAQEACIRPPQAIRDTVSHDGTR 80

Query: 595 KWIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +E VFIPE NR TLCIS+Q GCA++C FCSTG+QGF RNLT  EIIGQL
Sbjct: 81  KWLLDVGSANAVEAVFIPETNRGTLCISSQAGCALDCAFCSTGKQGFNRNLTAAEIIGQL 140

Query: 654 WVTEFKLRRE------KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAY 707
           W+    L         K+ +      R I+N+VMMGMGEPL N+ + + AL+L+L DHAY
Sbjct: 141 WLANKLLGGAAAPAGAKDAEGEPDNGRVISNVVMMGMGEPLTNFDNVVTALRLMLDDHAY 200

Query: 708 GLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILAC 767
           GLSRR V +STSGI+P +D+L  ECPV LAVSLHA ++ LR++LVPI++KYPL+EL+ AC
Sbjct: 201 GLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHAPDDALRDRLVPINQKYPLRELMAAC 260

Query: 768 HRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNL 827
            RY+  +PR  +TFEY ML G+NDTD HA  L++L+R       CK NLIPFN FPN+  
Sbjct: 261 QRYLERAPRDFVTFEYVMLDGVNDTDAHARALVALVRD----VPCKFNLIPFNPFPNAGF 316

Query: 828 ICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
             S   RI+ FA IL+++GI  T RK RG+D+NAACGQL+G+  D  ++
Sbjct: 317 ERSHPDRIRRFASILIDAGIVTTTRKTRGDDVNAACGQLAGQVQDRTRR 365


>gi|198283717|ref|YP_002220038.1| GTP-binding protein EngA [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667499|ref|YP_002426346.1| GTP-binding protein EngA [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226741127|sp|B7JC34.1|DER_ACIF2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|238690897|sp|B5EJF7.1|DER_ACIF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|198248238|gb|ACH83831.1| small GTP-binding protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519712|gb|ACK80298.1| ribosome-associated GTPase EngA [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 449

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/429 (45%), Positives = 283/429 (65%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKST FNRLT +R+ALVA+ PGLTRDRHYG      + ++++DTGGF
Sbjct: 1   MTAVIALVGRPNVGKSTFFNRLTRTREALVADLPGLTRDRHYGTAQFEGRQYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EPE ++G++  M  QT+ AI E+D I F+VD ++GL  QD  I   LR+ G+PI LV+NK
Sbjct: 61  EPEEREGLVAAMAAQTRLAITEADAICFLVDAKEGLSTQDAEIAQELRRGGKPIYLVVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +   +   L +FY LG+G P+ ISA +G+G++  LE I + +LP       ++ T   +
Sbjct: 121 MDAKGAVSELPEFYRLGLGTPYTISAAHGHGVEPLLEAIFS-DLP-----TSEDDTADAA 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            +  ++A++G+PNVGKSTL+N++LGE RV+ +D PGTTRDSI+  +E   K Y++IDTAG
Sbjct: 175 RKGPRIAMLGRPNVGKSTLVNTMLGEKRVLVFDEPGTTRDSIRIPYERQGKPYVMIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  E +EK SV+KTL ++ EA+VV+L+LDA+  I+ QD ++     E GR ++V 
Sbjct: 235 MRRRARVGEGLEKLSVLKTLSALREADVVLLVLDARLGIAEQDAHLVGVAVELGRPIVVV 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   +RK +K  ++++L+F+ +A    ISA+    +    +SI+ ++  S  H 
Sbjct: 295 VNKWDGMTPEERKAVKQELERRLDFIRYAPVYTISALHGTGVGDLYKSIDQLWIDSRRHF 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ + RAL   I+ H P      R KLRY HQGG+NP  +V HGN+L  +   YKRYLE
Sbjct: 355 STAELNRALADVIETHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQLTRLPGTYKRYLE 414

Query: 420 KYFYRTFSL 428
             F R   L
Sbjct: 415 SAFRRALHL 423


>gi|420337230|ref|ZP_14838796.1| GTPase Der [Shigella flexneri K-315]
 gi|391260108|gb|EIQ19173.1| GTPase Der [Shigella flexneri K-315]
          Length = 490

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 296/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEKEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|422806467|ref|ZP_16854899.1| ribosome GTPase EngA [Escherichia fergusonii B253]
 gi|324113005|gb|EGC06981.1| ribosome GTPase EngA [Escherichia fergusonii B253]
          Length = 490

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLTPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|417286436|ref|ZP_12073725.1| ribosome-associated GTPase EngA [Escherichia coli TW07793]
 gi|386249895|gb|EII96064.1| ribosome-associated GTPase EngA [Escherichia coli TW07793]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-QD 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|300920666|ref|ZP_07137077.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1]
 gi|300412347|gb|EFJ95657.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1]
          Length = 499

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAACHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|417828922|ref|ZP_12475473.1| small GTP-binding domain protein [Shigella flexneri J1713]
 gi|335574777|gb|EGM61095.1| small GTP-binding domain protein [Shigella flexneri J1713]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 ADGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|171463401|ref|YP_001797514.1| radical SAM enzyme, Cfr family [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192939|gb|ACB43900.1| radical SAM enzyme, Cfr family [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 383

 Score =  403 bits (1036), Expect = e-109,   Method: Composition-based stats.
 Identities = 194/350 (55%), Positives = 249/350 (71%), Gaps = 14/350 (4%)

Query: 533 VHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDG 592
           V  L E PFRAKQL +WIH+ GVSD N M+DL+ S R  L +   + +  ++ D+ + DG
Sbjct: 5   VAGLNEKPFRAKQLMQWIHQRGVSDINHMSDLAKSFRATLLDKTEVLSLPVIKDEHALDG 64

Query: 593 TRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIG 651
           TRKW+  V   N +E+VFIPE +R TLCIS+Q GCA+NC FCSTG QGF RNLT GEIIG
Sbjct: 65  TRKWLLDVGAGNAVESVFIPEDDRGTLCISSQAGCAVNCRFCSTGHQGFARNLTSGEIIG 124

Query: 652 QLWVTEFKLRREKNI-----KINSQG----KRQITNIVMMGMGEPLLNYKSTIGALKLIL 702
           QLW  E  LR +        K  + G     R I+N+VMMGMGEPLLNY + + AL+L+L
Sbjct: 125 QLWFAEHLLRNDPEAVCRIEKFLTPGWEHTGRVISNVVMMGMGEPLLNYDNVVSALRLML 184

Query: 703 SDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKE 762
            D AYGLSRR V +STSG++PMID+LAQ+CPV LAVSLHA N+ LR++LVP+++KY L+E
Sbjct: 185 DDRAYGLSRRRVTVSTSGVVPMIDRLAQDCPVALAVSLHAPNDALRDQLVPLNQKYLLRE 244

Query: 763 LILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCF 822
           L+ AC RY+ ++PR  +TFEYCML  +ND+DI A EL+ L+R  K    CKINLIPFN F
Sbjct: 245 LLDACERYLPFAPRDFLTFEYCMLDSVNDSDIQAKELVRLLRNIK----CKINLIPFNPF 300

Query: 823 PNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           P S L  S   R+  FA IL+++G+  T+RK RG+DI AACGQL+G+  D
Sbjct: 301 PESGLKRSPAQRVNAFAGILLDAGMVATVRKTRGDDIAAACGQLAGDVVD 350


>gi|424815436|ref|ZP_18240587.1| putative GTP-binding factor [Escherichia fergusonii ECD227]
 gi|325496456|gb|EGC94315.1| putative GTP-binding factor [Escherichia fergusonii ECD227]
          Length = 499

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|432441977|ref|ZP_19684317.1| GTPase Der [Escherichia coli KTE189]
 gi|432447083|ref|ZP_19689382.1| GTPase Der [Escherichia coli KTE191]
 gi|432617653|ref|ZP_19853766.1| GTPase Der [Escherichia coli KTE75]
 gi|432899588|ref|ZP_20110177.1| GTPase Der [Escherichia coli KTE192]
 gi|433014793|ref|ZP_20203135.1| GTPase Der [Escherichia coli KTE104]
 gi|433024365|ref|ZP_20212346.1| GTPase Der [Escherichia coli KTE106]
 gi|433029449|ref|ZP_20217305.1| GTPase Der [Escherichia coli KTE109]
 gi|433199168|ref|ZP_20383065.1| GTPase Der [Escherichia coli KTE94]
 gi|433322943|ref|ZP_20400332.1| GTP-binding protein Der [Escherichia coli J96]
 gi|430966431|gb|ELC83839.1| GTPase Der [Escherichia coli KTE189]
 gi|430973356|gb|ELC90324.1| GTPase Der [Escherichia coli KTE191]
 gi|431153641|gb|ELE54545.1| GTPase Der [Escherichia coli KTE75]
 gi|431425717|gb|ELH07785.1| GTPase Der [Escherichia coli KTE192]
 gi|431529779|gb|ELI06474.1| GTPase Der [Escherichia coli KTE104]
 gi|431534426|gb|ELI10909.1| GTPase Der [Escherichia coli KTE106]
 gi|431542501|gb|ELI17668.1| GTPase Der [Escherichia coli KTE109]
 gi|431720553|gb|ELJ84580.1| GTPase Der [Escherichia coli KTE94]
 gi|432348516|gb|ELL42966.1| GTP-binding protein Der [Escherichia coli J96]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|110642676|ref|YP_670406.1| GTP-binding protein EngA [Escherichia coli 536]
 gi|161486155|ref|NP_754915.2| GTP-binding protein EngA [Escherichia coli CFT073]
 gi|191172582|ref|ZP_03034121.1| ribosome-associated GTPase EngA [Escherichia coli F11]
 gi|218701021|ref|YP_002408650.1| GTP-binding protein EngA [Escherichia coli IAI39]
 gi|312965427|ref|ZP_07779659.1| small GTP-binding domain protein [Escherichia coli 2362-75]
 gi|386620118|ref|YP_006139698.1| putative GTP-binding protein [Escherichia coli NA114]
 gi|386625248|ref|YP_006144976.1| GTPase, multicopy suppressor of ftsJ [Escherichia coli O7:K1 str.
           CE10]
 gi|386640042|ref|YP_006106840.1| GTP-binding protein EngA [Escherichia coli ABU 83972]
 gi|387830408|ref|YP_003350345.1| putative GTP-binding protein [Escherichia coli SE15]
 gi|415840210|ref|ZP_11521699.1| small GTP-binding domain protein [Escherichia coli RN587/1]
 gi|416335665|ref|ZP_11672358.1| GTP-binding protein EngA [Escherichia coli WV_060327]
 gi|417281586|ref|ZP_12068886.1| ribosome-associated GTPase EngA [Escherichia coli 3003]
 gi|417663068|ref|ZP_12312649.1| GTP-binding protein EngA [Escherichia coli AA86]
 gi|417756768|ref|ZP_12404842.1| small GTP-binding domain protein [Escherichia coli DEC2B]
 gi|418997396|ref|ZP_13544990.1| small GTP-binding domain protein [Escherichia coli DEC1A]
 gi|419003065|ref|ZP_13550589.1| small GTP-binding domain protein [Escherichia coli DEC1B]
 gi|419008748|ref|ZP_13556179.1| small GTP-binding domain protein [Escherichia coli DEC1C]
 gi|419014422|ref|ZP_13561770.1| GTPase Der [Escherichia coli DEC1D]
 gi|419019440|ref|ZP_13566746.1| small GTP-binding domain protein [Escherichia coli DEC1E]
 gi|419024940|ref|ZP_13572166.1| GTPase Der [Escherichia coli DEC2A]
 gi|419029977|ref|ZP_13577138.1| small GTP-binding domain protein [Escherichia coli DEC2C]
 gi|419035402|ref|ZP_13582488.1| small GTP-binding domain protein [Escherichia coli DEC2D]
 gi|419040663|ref|ZP_13587691.1| small GTP-binding domain protein [Escherichia coli DEC2E]
 gi|419914739|ref|ZP_14433127.1| GTP-binding protein EngA [Escherichia coli KD1]
 gi|425278912|ref|ZP_18670150.1| ribosome-associated GTPase EngA [Escherichia coli ARS4.2123]
 gi|425301366|ref|ZP_18691257.1| ribosome-associated GTPase EngA [Escherichia coli 07798]
 gi|432398467|ref|ZP_19641246.1| GTPase Der [Escherichia coli KTE25]
 gi|432407592|ref|ZP_19650300.1| GTPase Der [Escherichia coli KTE28]
 gi|432412684|ref|ZP_19655346.1| GTPase Der [Escherichia coli KTE39]
 gi|432422863|ref|ZP_19665407.1| GTPase Der [Escherichia coli KTE178]
 gi|432432760|ref|ZP_19675187.1| GTPase Der [Escherichia coli KTE187]
 gi|432437243|ref|ZP_19679631.1| GTPase Der [Escherichia coli KTE188]
 gi|432457583|ref|ZP_19699765.1| GTPase Der [Escherichia coli KTE201]
 gi|432466700|ref|ZP_19708787.1| GTPase Der [Escherichia coli KTE205]
 gi|432471838|ref|ZP_19713882.1| GTPase Der [Escherichia coli KTE206]
 gi|432496579|ref|ZP_19738375.1| GTPase Der [Escherichia coli KTE214]
 gi|432501003|ref|ZP_19742760.1| GTPase Der [Escherichia coli KTE216]
 gi|432505322|ref|ZP_19747045.1| GTPase Der [Escherichia coli KTE220]
 gi|432524716|ref|ZP_19761843.1| GTPase Der [Escherichia coli KTE230]
 gi|432554558|ref|ZP_19791279.1| GTPase Der [Escherichia coli KTE47]
 gi|432559726|ref|ZP_19796395.1| GTPase Der [Escherichia coli KTE49]
 gi|432569605|ref|ZP_19806115.1| GTPase Der [Escherichia coli KTE53]
 gi|432584726|ref|ZP_19821118.1| GTPase Der [Escherichia coli KTE57]
 gi|432593737|ref|ZP_19830052.1| GTPase Der [Escherichia coli KTE60]
 gi|432608405|ref|ZP_19844589.1| GTPase Der [Escherichia coli KTE67]
 gi|432652045|ref|ZP_19887798.1| GTPase Der [Escherichia coli KTE87]
 gi|432695330|ref|ZP_19930528.1| GTPase Der [Escherichia coli KTE162]
 gi|432711531|ref|ZP_19946589.1| GTPase Der [Escherichia coli KTE6]
 gi|432714251|ref|ZP_19949288.1| GTPase Der [Escherichia coli KTE8]
 gi|432723987|ref|ZP_19958904.1| GTPase Der [Escherichia coli KTE17]
 gi|432728568|ref|ZP_19963446.1| GTPase Der [Escherichia coli KTE18]
 gi|432742252|ref|ZP_19976971.1| GTPase Der [Escherichia coli KTE23]
 gi|432784436|ref|ZP_20018615.1| GTPase Der [Escherichia coli KTE63]
 gi|432845473|ref|ZP_20078273.1| GTPase Der [Escherichia coli KTE141]
 gi|432895485|ref|ZP_20107205.1| GTPase Der [Escherichia coli KTE165]
 gi|432920490|ref|ZP_20124125.1| GTPase Der [Escherichia coli KTE173]
 gi|432928087|ref|ZP_20129340.1| GTPase Der [Escherichia coli KTE175]
 gi|432974672|ref|ZP_20163509.1| GTPase Der [Escherichia coli KTE209]
 gi|432981890|ref|ZP_20170665.1| GTPase Der [Escherichia coli KTE211]
 gi|432991618|ref|ZP_20180282.1| GTPase Der [Escherichia coli KTE217]
 gi|432996227|ref|ZP_20184813.1| GTPase Der [Escherichia coli KTE218]
 gi|433000798|ref|ZP_20189322.1| GTPase Der [Escherichia coli KTE223]
 gi|433058997|ref|ZP_20246040.1| GTPase Der [Escherichia coli KTE124]
 gi|433073740|ref|ZP_20260391.1| GTPase Der [Escherichia coli KTE129]
 gi|433078691|ref|ZP_20265219.1| GTPase Der [Escherichia coli KTE131]
 gi|433088204|ref|ZP_20274574.1| GTPase Der [Escherichia coli KTE137]
 gi|433097332|ref|ZP_20283515.1| GTPase Der [Escherichia coli KTE139]
 gi|433106776|ref|ZP_20292748.1| GTPase Der [Escherichia coli KTE148]
 gi|433111752|ref|ZP_20297613.1| GTPase Der [Escherichia coli KTE150]
 gi|433116410|ref|ZP_20302199.1| GTPase Der [Escherichia coli KTE153]
 gi|433121070|ref|ZP_20306740.1| GTPase Der [Escherichia coli KTE157]
 gi|433126080|ref|ZP_20311635.1| GTPase Der [Escherichia coli KTE160]
 gi|433140148|ref|ZP_20325401.1| GTPase Der [Escherichia coli KTE167]
 gi|433150065|ref|ZP_20335083.1| GTPase Der [Escherichia coli KTE174]
 gi|433184215|ref|ZP_20368460.1| GTPase Der [Escherichia coli KTE85]
 gi|433208644|ref|ZP_20392318.1| GTPase Der [Escherichia coli KTE97]
 gi|433213428|ref|ZP_20397018.1| GTPase Der [Escherichia coli KTE99]
 gi|442608257|ref|ZP_21023017.1| GTP-binding protein EngA [Escherichia coli Nissle 1917]
 gi|31563151|sp|Q8FF59.2|DER_ECOL6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|123147831|sp|Q0TEX4.1|DER_ECOL5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|226741137|sp|B7NQW0.1|DER_ECO7I RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|110344268|gb|ABG70505.1| probable GTP-binding protein EngA [Escherichia coli 536]
 gi|190907055|gb|EDV66655.1| ribosome-associated GTPase EngA [Escherichia coli F11]
 gi|218371007|emb|CAR18835.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
           coli IAI39]
 gi|281179565|dbj|BAI55895.1| putative GTP-binding protein [Escherichia coli SE15]
 gi|307554534|gb|ADN47309.1| GTP-binding protein EngA [Escherichia coli ABU 83972]
 gi|312289847|gb|EFR17735.1| small GTP-binding domain protein [Escherichia coli 2362-75]
 gi|320196348|gb|EFW70972.1| GTP-binding protein EngA [Escherichia coli WV_060327]
 gi|323188371|gb|EFZ73663.1| small GTP-binding domain protein [Escherichia coli RN587/1]
 gi|330912286|gb|EGH40796.1| GTP-binding protein EngA [Escherichia coli AA86]
 gi|333970619|gb|AEG37424.1| putative GTP-binding protein [Escherichia coli NA114]
 gi|349738985|gb|AEQ13691.1| GTPase, multicopy suppressor of ftsJ [Escherichia coli O7:K1 str.
           CE10]
 gi|377843223|gb|EHU08263.1| small GTP-binding domain protein [Escherichia coli DEC1A]
 gi|377844266|gb|EHU09303.1| small GTP-binding domain protein [Escherichia coli DEC1C]
 gi|377846668|gb|EHU11675.1| small GTP-binding domain protein [Escherichia coli DEC1B]
 gi|377856390|gb|EHU21250.1| GTPase Der [Escherichia coli DEC1D]
 gi|377859443|gb|EHU24274.1| small GTP-binding domain protein [Escherichia coli DEC1E]
 gi|377863724|gb|EHU28529.1| GTPase Der [Escherichia coli DEC2A]
 gi|377873342|gb|EHU37979.1| small GTP-binding domain protein [Escherichia coli DEC2B]
 gi|377876977|gb|EHU41575.1| small GTP-binding domain protein [Escherichia coli DEC2C]
 gi|377879758|gb|EHU44330.1| small GTP-binding domain protein [Escherichia coli DEC2D]
 gi|377890703|gb|EHU55160.1| small GTP-binding domain protein [Escherichia coli DEC2E]
 gi|386245915|gb|EII87645.1| ribosome-associated GTPase EngA [Escherichia coli 3003]
 gi|388385709|gb|EIL47380.1| GTP-binding protein EngA [Escherichia coli KD1]
 gi|408200544|gb|EKI25721.1| ribosome-associated GTPase EngA [Escherichia coli ARS4.2123]
 gi|408212758|gb|EKI37271.1| ribosome-associated GTPase EngA [Escherichia coli 07798]
 gi|430914715|gb|ELC35810.1| GTPase Der [Escherichia coli KTE25]
 gi|430929066|gb|ELC49587.1| GTPase Der [Escherichia coli KTE28]
 gi|430934539|gb|ELC54894.1| GTPase Der [Escherichia coli KTE39]
 gi|430943599|gb|ELC63706.1| GTPase Der [Escherichia coli KTE178]
 gi|430952128|gb|ELC71335.1| GTPase Der [Escherichia coli KTE187]
 gi|430962574|gb|ELC80431.1| GTPase Der [Escherichia coli KTE188]
 gi|430981590|gb|ELC98317.1| GTPase Der [Escherichia coli KTE201]
 gi|430992983|gb|ELD09342.1| GTPase Der [Escherichia coli KTE205]
 gi|430997580|gb|ELD13841.1| GTPase Der [Escherichia coli KTE206]
 gi|431023837|gb|ELD37032.1| GTPase Der [Escherichia coli KTE214]
 gi|431028580|gb|ELD41624.1| GTPase Der [Escherichia coli KTE216]
 gi|431037672|gb|ELD48648.1| GTPase Der [Escherichia coli KTE220]
 gi|431051167|gb|ELD60842.1| GTPase Der [Escherichia coli KTE230]
 gi|431083223|gb|ELD89530.1| GTPase Der [Escherichia coli KTE47]
 gi|431090946|gb|ELD96697.1| GTPase Der [Escherichia coli KTE49]
 gi|431099095|gb|ELE04396.1| GTPase Der [Escherichia coli KTE53]
 gi|431115480|gb|ELE18983.1| GTPase Der [Escherichia coli KTE57]
 gi|431127065|gb|ELE29380.1| GTPase Der [Escherichia coli KTE60]
 gi|431137349|gb|ELE39196.1| GTPase Der [Escherichia coli KTE67]
 gi|431189900|gb|ELE89317.1| GTPase Der [Escherichia coli KTE87]
 gi|431233418|gb|ELF29009.1| GTPase Der [Escherichia coli KTE162]
 gi|431248483|gb|ELF42677.1| GTPase Der [Escherichia coli KTE6]
 gi|431256101|gb|ELF49178.1| GTPase Der [Escherichia coli KTE8]
 gi|431264579|gb|ELF56284.1| GTPase Der [Escherichia coli KTE17]
 gi|431273120|gb|ELF64218.1| GTPase Der [Escherichia coli KTE18]
 gi|431283943|gb|ELF74802.1| GTPase Der [Escherichia coli KTE23]
 gi|431328859|gb|ELG16163.1| GTPase Der [Escherichia coli KTE63]
 gi|431394329|gb|ELG77865.1| GTPase Der [Escherichia coli KTE141]
 gi|431421852|gb|ELH04064.1| GTPase Der [Escherichia coli KTE165]
 gi|431441692|gb|ELH22800.1| GTPase Der [Escherichia coli KTE173]
 gi|431443052|gb|ELH24130.1| GTPase Der [Escherichia coli KTE175]
 gi|431488404|gb|ELH68039.1| GTPase Der [Escherichia coli KTE209]
 gi|431491199|gb|ELH70806.1| GTPase Der [Escherichia coli KTE211]
 gi|431495700|gb|ELH75286.1| GTPase Der [Escherichia coli KTE217]
 gi|431505257|gb|ELH83879.1| GTPase Der [Escherichia coli KTE218]
 gi|431508190|gb|ELH86464.1| GTPase Der [Escherichia coli KTE223]
 gi|431568530|gb|ELI41503.1| GTPase Der [Escherichia coli KTE124]
 gi|431587108|gb|ELI58489.1| GTPase Der [Escherichia coli KTE129]
 gi|431595815|gb|ELI65802.1| GTPase Der [Escherichia coli KTE131]
 gi|431603981|gb|ELI73397.1| GTPase Der [Escherichia coli KTE137]
 gi|431614913|gb|ELI84047.1| GTPase Der [Escherichia coli KTE139]
 gi|431626484|gb|ELI95033.1| GTPase Der [Escherichia coli KTE148]
 gi|431627495|gb|ELI95897.1| GTPase Der [Escherichia coli KTE150]
 gi|431633231|gb|ELJ01512.1| GTPase Der [Escherichia coli KTE153]
 gi|431641770|gb|ELJ09504.1| GTPase Der [Escherichia coli KTE157]
 gi|431643592|gb|ELJ11283.1| GTPase Der [Escherichia coli KTE160]
 gi|431659152|gb|ELJ26050.1| GTPase Der [Escherichia coli KTE167]
 gi|431669859|gb|ELJ36224.1| GTPase Der [Escherichia coli KTE174]
 gi|431705312|gb|ELJ69909.1| GTPase Der [Escherichia coli KTE85]
 gi|431729929|gb|ELJ93548.1| GTPase Der [Escherichia coli KTE97]
 gi|431734453|gb|ELJ97854.1| GTPase Der [Escherichia coli KTE99]
 gi|441710862|emb|CCQ08994.1| GTP-binding protein EngA [Escherichia coli Nissle 1917]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|432802706|ref|ZP_20036675.1| GTPase Der [Escherichia coli KTE84]
 gi|431347848|gb|ELG34725.1| GTPase Der [Escherichia coli KTE84]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|170681267|ref|YP_001744699.1| GTP-binding protein EngA [Escherichia coli SMS-3-5]
 gi|218706014|ref|YP_002413533.1| GTP-binding protein EngA [Escherichia coli UMN026]
 gi|293405952|ref|ZP_06649944.1| GTP-binding protein engA [Escherichia coli FVEC1412]
 gi|298381753|ref|ZP_06991352.1| GTP-binding protein engA [Escherichia coli FVEC1302]
 gi|331664074|ref|ZP_08364984.1| ribosome-associated GTPase EngA [Escherichia coli TA143]
 gi|387608161|ref|YP_006097017.1| GTP-binding protein [Escherichia coli 042]
 gi|417587510|ref|ZP_12238279.1| small GTP-binding domain protein [Escherichia coli STEC_C165-02]
 gi|419933195|ref|ZP_14450463.1| GTP-binding protein EngA [Escherichia coli 576-1]
 gi|422787128|ref|ZP_16839867.1| ribosome GTPase EngA [Escherichia coli H489]
 gi|422829998|ref|ZP_16878160.1| GTP-binding protein engA [Escherichia coli B093]
 gi|422972908|ref|ZP_16975520.1| GTPase Der [Escherichia coli TA124]
 gi|425306241|ref|ZP_18695943.1| ribosome-associated GTPase EngA [Escherichia coli N1]
 gi|432354427|ref|ZP_19597698.1| GTPase Der [Escherichia coli KTE2]
 gi|432402776|ref|ZP_19645528.1| GTPase Der [Escherichia coli KTE26]
 gi|432427042|ref|ZP_19669541.1| GTPase Der [Escherichia coli KTE181]
 gi|432461508|ref|ZP_19703655.1| GTPase Der [Escherichia coli KTE204]
 gi|432476732|ref|ZP_19718729.1| GTPase Der [Escherichia coli KTE208]
 gi|432490279|ref|ZP_19732148.1| GTPase Der [Escherichia coli KTE213]
 gi|432518610|ref|ZP_19755796.1| GTPase Der [Escherichia coli KTE228]
 gi|432538733|ref|ZP_19775633.1| GTPase Der [Escherichia coli KTE235]
 gi|432603142|ref|ZP_19839386.1| GTPase Der [Escherichia coli KTE66]
 gi|432632272|ref|ZP_19868197.1| GTPase Der [Escherichia coli KTE80]
 gi|432641988|ref|ZP_19877820.1| GTPase Der [Escherichia coli KTE83]
 gi|432666937|ref|ZP_19902516.1| GTPase Der [Escherichia coli KTE116]
 gi|432681121|ref|ZP_19916494.1| GTPase Der [Escherichia coli KTE143]
 gi|432719659|ref|ZP_19954627.1| GTPase Der [Escherichia coli KTE9]
 gi|432771463|ref|ZP_20005788.1| GTPase Der [Escherichia coli KTE50]
 gi|432775591|ref|ZP_20009860.1| GTPase Der [Escherichia coli KTE54]
 gi|432793702|ref|ZP_20027786.1| GTPase Der [Escherichia coli KTE78]
 gi|432799661|ref|ZP_20033682.1| GTPase Der [Escherichia coli KTE79]
 gi|432840303|ref|ZP_20073768.1| GTPase Der [Escherichia coli KTE140]
 gi|432852169|ref|ZP_20082211.1| GTPase Der [Escherichia coli KTE144]
 gi|432863374|ref|ZP_20087421.1| GTPase Der [Escherichia coli KTE146]
 gi|432887488|ref|ZP_20101541.1| GTPase Der [Escherichia coli KTE158]
 gi|432913728|ref|ZP_20119361.1| GTPase Der [Escherichia coli KTE190]
 gi|432962776|ref|ZP_20152308.1| GTPase Der [Escherichia coli KTE202]
 gi|433019574|ref|ZP_20207774.1| GTPase Der [Escherichia coli KTE105]
 gi|433054155|ref|ZP_20241329.1| GTPase Der [Escherichia coli KTE122]
 gi|433063951|ref|ZP_20250870.1| GTPase Der [Escherichia coli KTE125]
 gi|433068801|ref|ZP_20255587.1| GTPase Der [Escherichia coli KTE128]
 gi|433159556|ref|ZP_20344391.1| GTPase Der [Escherichia coli KTE177]
 gi|433179346|ref|ZP_20363741.1| GTPase Der [Escherichia coli KTE82]
 gi|433204180|ref|ZP_20387947.1| GTPase Der [Escherichia coli KTE95]
 gi|226741139|sp|B7N699.1|DER_ECOLU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|226741140|sp|B1LNG6.1|DER_ECOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|170518985|gb|ACB17163.1| GTP-binding protein EngA [Escherichia coli SMS-3-5]
 gi|218433111|emb|CAR14008.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
           coli UMN026]
 gi|284922461|emb|CBG35548.1| GTP-binding protein [Escherichia coli 042]
 gi|291428160|gb|EFF01187.1| GTP-binding protein engA [Escherichia coli FVEC1412]
 gi|298279195|gb|EFI20709.1| GTP-binding protein engA [Escherichia coli FVEC1302]
 gi|323961327|gb|EGB56939.1| ribosome GTPase EngA [Escherichia coli H489]
 gi|331059873|gb|EGI31850.1| ribosome-associated GTPase EngA [Escherichia coli TA143]
 gi|345335540|gb|EGW67978.1| small GTP-binding domain protein [Escherichia coli STEC_C165-02]
 gi|371597541|gb|EHN86362.1| GTPase Der [Escherichia coli TA124]
 gi|371607185|gb|EHN95763.1| GTP-binding protein engA [Escherichia coli B093]
 gi|388414225|gb|EIL74191.1| GTP-binding protein EngA [Escherichia coli 576-1]
 gi|408227873|gb|EKI51442.1| ribosome-associated GTPase EngA [Escherichia coli N1]
 gi|430874834|gb|ELB98386.1| GTPase Der [Escherichia coli KTE2]
 gi|430925247|gb|ELC45920.1| GTPase Der [Escherichia coli KTE26]
 gi|430954741|gb|ELC73596.1| GTPase Der [Escherichia coli KTE181]
 gi|430988329|gb|ELD04823.1| GTPase Der [Escherichia coli KTE204]
 gi|431004550|gb|ELD19764.1| GTPase Der [Escherichia coli KTE208]
 gi|431019731|gb|ELD33125.1| GTPase Der [Escherichia coli KTE213]
 gi|431050404|gb|ELD60154.1| GTPase Der [Escherichia coli KTE228]
 gi|431068613|gb|ELD77087.1| GTPase Der [Escherichia coli KTE235]
 gi|431141716|gb|ELE43481.1| GTPase Der [Escherichia coli KTE66]
 gi|431169850|gb|ELE70065.1| GTPase Der [Escherichia coli KTE80]
 gi|431181251|gb|ELE81122.1| GTPase Der [Escherichia coli KTE83]
 gi|431199763|gb|ELE98490.1| GTPase Der [Escherichia coli KTE116]
 gi|431219851|gb|ELF17240.1| GTPase Der [Escherichia coli KTE143]
 gi|431261852|gb|ELF53875.1| GTPase Der [Escherichia coli KTE9]
 gi|431313929|gb|ELG01884.1| GTPase Der [Escherichia coli KTE50]
 gi|431317595|gb|ELG05373.1| GTPase Der [Escherichia coli KTE54]
 gi|431339365|gb|ELG26427.1| GTPase Der [Escherichia coli KTE78]
 gi|431342769|gb|ELG29740.1| GTPase Der [Escherichia coli KTE79]
 gi|431388337|gb|ELG72073.1| GTPase Der [Escherichia coli KTE140]
 gi|431399425|gb|ELG82832.1| GTPase Der [Escherichia coli KTE144]
 gi|431403972|gb|ELG87232.1| GTPase Der [Escherichia coli KTE146]
 gi|431415837|gb|ELG98332.1| GTPase Der [Escherichia coli KTE158]
 gi|431438993|gb|ELH20362.1| GTPase Der [Escherichia coli KTE190]
 gi|431472650|gb|ELH52537.1| GTPase Der [Escherichia coli KTE202]
 gi|431529882|gb|ELI06573.1| GTPase Der [Escherichia coli KTE105]
 gi|431569584|gb|ELI42526.1| GTPase Der [Escherichia coli KTE122]
 gi|431580737|gb|ELI53294.1| GTPase Der [Escherichia coli KTE125]
 gi|431582684|gb|ELI54696.1| GTPase Der [Escherichia coli KTE128]
 gi|431677048|gb|ELJ43130.1| GTPase Der [Escherichia coli KTE177]
 gi|431700229|gb|ELJ65211.1| GTPase Der [Escherichia coli KTE82]
 gi|431720127|gb|ELJ84161.1| GTPase Der [Escherichia coli KTE95]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|162138394|ref|YP_541823.2| GTP-binding protein EngA [Escherichia coli UTI89]
 gi|218559437|ref|YP_002392350.1| GTP-binding protein EngA [Escherichia coli S88]
 gi|218690631|ref|YP_002398843.1| GTP-binding protein EngA [Escherichia coli ED1a]
 gi|222157217|ref|YP_002557356.1| GTP-binding protein engA [Escherichia coli LF82]
 gi|306814419|ref|ZP_07448581.1| GTP-binding protein EngA [Escherichia coli NC101]
 gi|386600489|ref|YP_006101995.1| ribosome-associated GTPase EngA [Escherichia coli IHE3034]
 gi|386603449|ref|YP_006109749.1| GTP-binding protein EngA [Escherichia coli UM146]
 gi|387617827|ref|YP_006120849.1| GTP-binding protein EngA [Escherichia coli O83:H1 str. NRG 857C]
 gi|417085911|ref|ZP_11953221.1| GTP-binding protein EngA [Escherichia coli cloneA_i1]
 gi|419947488|ref|ZP_14463834.1| GTP-binding protein EngA [Escherichia coli HM605]
 gi|422752149|ref|ZP_16806053.1| ribosome GTPase EngA [Escherichia coli H252]
 gi|422755893|ref|ZP_16809717.1| ribosome GTPase EngA [Escherichia coli H263]
 gi|422837418|ref|ZP_16885391.1| GTP-binding protein engA [Escherichia coli H397]
 gi|432358852|ref|ZP_19602072.1| GTPase Der [Escherichia coli KTE4]
 gi|432363610|ref|ZP_19606774.1| GTPase Der [Escherichia coli KTE5]
 gi|432382206|ref|ZP_19625149.1| GTPase Der [Escherichia coli KTE15]
 gi|432574611|ref|ZP_19811089.1| GTPase Der [Escherichia coli KTE55]
 gi|432588793|ref|ZP_19825149.1| GTPase Der [Escherichia coli KTE58]
 gi|432598517|ref|ZP_19834791.1| GTPase Der [Escherichia coli KTE62]
 gi|432612376|ref|ZP_19848538.1| GTPase Der [Escherichia coli KTE72]
 gi|432647039|ref|ZP_19882828.1| GTPase Der [Escherichia coli KTE86]
 gi|432656674|ref|ZP_19892377.1| GTPase Der [Escherichia coli KTE93]
 gi|432733253|ref|ZP_19968082.1| GTPase Der [Escherichia coli KTE45]
 gi|432755345|ref|ZP_19989893.1| GTPase Der [Escherichia coli KTE22]
 gi|432760335|ref|ZP_19994829.1| GTPase Der [Escherichia coli KTE46]
 gi|432779415|ref|ZP_20013648.1| GTPase Der [Escherichia coli KTE59]
 gi|432788417|ref|ZP_20022547.1| GTPase Der [Escherichia coli KTE65]
 gi|432821863|ref|ZP_20055554.1| GTPase Der [Escherichia coli KTE118]
 gi|432828001|ref|ZP_20061650.1| GTPase Der [Escherichia coli KTE123]
 gi|432905840|ref|ZP_20114640.1| GTPase Der [Escherichia coli KTE194]
 gi|432938853|ref|ZP_20137096.1| GTPase Der [Escherichia coli KTE183]
 gi|432972670|ref|ZP_20161536.1| GTPase Der [Escherichia coli KTE207]
 gi|432986227|ref|ZP_20174948.1| GTPase Der [Escherichia coli KTE215]
 gi|433005974|ref|ZP_20194402.1| GTPase Der [Escherichia coli KTE227]
 gi|433008570|ref|ZP_20196986.1| GTPase Der [Escherichia coli KTE229]
 gi|433039516|ref|ZP_20227114.1| GTPase Der [Escherichia coli KTE113]
 gi|433083425|ref|ZP_20269881.1| GTPase Der [Escherichia coli KTE133]
 gi|433102051|ref|ZP_20288131.1| GTPase Der [Escherichia coli KTE145]
 gi|433154592|ref|ZP_20339530.1| GTPase Der [Escherichia coli KTE176]
 gi|433164405|ref|ZP_20349140.1| GTPase Der [Escherichia coli KTE179]
 gi|433169479|ref|ZP_20354104.1| GTPase Der [Escherichia coli KTE180]
 gi|433189251|ref|ZP_20373348.1| GTPase Der [Escherichia coli KTE88]
 gi|226741136|sp|B7MHZ6.1|DER_ECO45 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|254783154|sp|B7MYE6.1|DER_ECO81 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|218366206|emb|CAR03954.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
           coli S88]
 gi|218428195|emb|CAR09112.2| GTPase involved in ribosome synthesis and maintenance [Escherichia
           coli ED1a]
 gi|222034222|emb|CAP76963.1| GTP-binding protein engA [Escherichia coli LF82]
 gi|294491525|gb|ADE90281.1| ribosome-associated GTPase EngA [Escherichia coli IHE3034]
 gi|305851813|gb|EFM52265.1| GTP-binding protein EngA [Escherichia coli NC101]
 gi|307625933|gb|ADN70237.1| GTP-binding protein EngA [Escherichia coli UM146]
 gi|312947088|gb|ADR27915.1| GTP-binding protein EngA [Escherichia coli O83:H1 str. NRG 857C]
 gi|323949171|gb|EGB45062.1| ribosome GTPase EngA [Escherichia coli H252]
 gi|323955752|gb|EGB51510.1| ribosome GTPase EngA [Escherichia coli H263]
 gi|355350889|gb|EHG00084.1| GTP-binding protein EngA [Escherichia coli cloneA_i1]
 gi|371615234|gb|EHO03662.1| GTP-binding protein engA [Escherichia coli H397]
 gi|388410496|gb|EIL70720.1| GTP-binding protein EngA [Escherichia coli HM605]
 gi|430876272|gb|ELB99791.1| GTPase Der [Escherichia coli KTE4]
 gi|430885815|gb|ELC08685.1| GTPase Der [Escherichia coli KTE5]
 gi|430907681|gb|ELC29179.1| GTPase Der [Escherichia coli KTE15]
 gi|431107058|gb|ELE11246.1| GTPase Der [Escherichia coli KTE55]
 gi|431121126|gb|ELE24124.1| GTPase Der [Escherichia coli KTE58]
 gi|431130030|gb|ELE32139.1| GTPase Der [Escherichia coli KTE62]
 gi|431148550|gb|ELE49841.1| GTPase Der [Escherichia coli KTE72]
 gi|431179694|gb|ELE79586.1| GTPase Der [Escherichia coli KTE86]
 gi|431190540|gb|ELE89939.1| GTPase Der [Escherichia coli KTE93]
 gi|431274462|gb|ELF65519.1| GTPase Der [Escherichia coli KTE45]
 gi|431301775|gb|ELF90976.1| GTPase Der [Escherichia coli KTE22]
 gi|431307989|gb|ELF96279.1| GTPase Der [Escherichia coli KTE46]
 gi|431326231|gb|ELG13593.1| GTPase Der [Escherichia coli KTE59]
 gi|431336612|gb|ELG23720.1| GTPase Der [Escherichia coli KTE65]
 gi|431367515|gb|ELG53992.1| GTPase Der [Escherichia coli KTE118]
 gi|431371489|gb|ELG57198.1| GTPase Der [Escherichia coli KTE123]
 gi|431431911|gb|ELH13685.1| GTPase Der [Escherichia coli KTE194]
 gi|431462839|gb|ELH43046.1| GTPase Der [Escherichia coli KTE183]
 gi|431480808|gb|ELH60524.1| GTPase Der [Escherichia coli KTE207]
 gi|431499121|gb|ELH78302.1| GTPase Der [Escherichia coli KTE215]
 gi|431513672|gb|ELH91754.1| GTPase Der [Escherichia coli KTE227]
 gi|431523185|gb|ELI00329.1| GTPase Der [Escherichia coli KTE229]
 gi|431550628|gb|ELI24617.1| GTPase Der [Escherichia coli KTE113]
 gi|431601549|gb|ELI71065.1| GTPase Der [Escherichia coli KTE133]
 gi|431618330|gb|ELI87304.1| GTPase Der [Escherichia coli KTE145]
 gi|431673114|gb|ELJ39344.1| GTPase Der [Escherichia coli KTE176]
 gi|431686680|gb|ELJ52240.1| GTPase Der [Escherichia coli KTE179]
 gi|431686827|gb|ELJ52383.1| GTPase Der [Escherichia coli KTE180]
 gi|431705168|gb|ELJ69766.1| GTPase Der [Escherichia coli KTE88]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|416299203|ref|ZP_11652284.1| GTP-binding protein EngA [Shigella flexneri CDC 796-83]
 gi|417683132|ref|ZP_12332482.1| small GTP-binding domain protein [Shigella boydii 3594-74]
 gi|420326668|ref|ZP_14828419.1| GTPase Der [Shigella flexneri CCH060]
 gi|420353927|ref|ZP_14855027.1| GTPase Der [Shigella boydii 4444-74]
 gi|421683595|ref|ZP_16123388.1| small GTP-binding domain protein [Shigella flexneri 1485-80]
 gi|320185211|gb|EFW59991.1| GTP-binding protein EngA [Shigella flexneri CDC 796-83]
 gi|332092745|gb|EGI97814.1| small GTP-binding domain protein [Shigella boydii 3594-74]
 gi|391250185|gb|EIQ09408.1| GTPase Der [Shigella flexneri CCH060]
 gi|391277260|gb|EIQ36010.1| GTPase Der [Shigella boydii 4444-74]
 gi|404337951|gb|EJZ64399.1| small GTP-binding domain protein [Shigella flexneri 1485-80]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEVEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|90111450|ref|NP_417006.2| GTPase; multicopy suppressor of ftsJ [Escherichia coli str. K-12
           substr. MG1655]
 gi|157156728|ref|YP_001463833.1| GTP-binding protein EngA [Escherichia coli E24377A]
 gi|157161986|ref|YP_001459304.1| GTP-binding protein EngA [Escherichia coli HS]
 gi|161367551|ref|NP_289064.2| GTP-binding protein EngA [Escherichia coli O157:H7 str. EDL933]
 gi|162139766|ref|NP_311400.2| GTP-binding protein EngA [Escherichia coli O157:H7 str. Sakai]
 gi|168748430|ref|ZP_02773452.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4113]
 gi|168756283|ref|ZP_02781290.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4401]
 gi|168761121|ref|ZP_02786128.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4501]
 gi|168768603|ref|ZP_02793610.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4486]
 gi|168773575|ref|ZP_02798582.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4196]
 gi|168778477|ref|ZP_02803484.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4076]
 gi|168787857|ref|ZP_02812864.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC869]
 gi|168798882|ref|ZP_02823889.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC508]
 gi|170019206|ref|YP_001724160.1| GTP-binding protein EngA [Escherichia coli ATCC 8739]
 gi|170082121|ref|YP_001731441.1| GTP-binding protein EngA [Escherichia coli str. K-12 substr. DH10B]
 gi|188494621|ref|ZP_03001891.1| GTP-binding protein EngA [Escherichia coli 53638]
 gi|191167672|ref|ZP_03029481.1| ribosome-associated GTPase EngA [Escherichia coli B7A]
 gi|193064026|ref|ZP_03045111.1| ribosome-associated GTPase EngA [Escherichia coli E22]
 gi|194427302|ref|ZP_03059852.1| ribosome-associated GTPase EngA [Escherichia coli B171]
 gi|194437572|ref|ZP_03069668.1| ribosome-associated GTPase EngA [Escherichia coli 101-1]
 gi|195936653|ref|ZP_03082035.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC4024]
 gi|208814338|ref|ZP_03255667.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821434|ref|ZP_03261754.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4042]
 gi|209399678|ref|YP_002271981.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC4115]
 gi|209919988|ref|YP_002294072.1| GTP-binding protein EngA [Escherichia coli SE11]
 gi|217326913|ref|ZP_03442996.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           TW14588]
 gi|218555036|ref|YP_002387949.1| GTP-binding protein EngA [Escherichia coli IAI1]
 gi|218696138|ref|YP_002403805.1| GTP-binding protein EngA [Escherichia coli 55989]
 gi|238901676|ref|YP_002927472.1| GTP-binding protein EngA [Escherichia coli BW2952]
 gi|251785836|ref|YP_003000140.1| 50S ribosomal subunit stability factor [Escherichia coli BL21(DE3)]
 gi|253772595|ref|YP_003035426.1| GTP-binding protein EngA [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162485|ref|YP_003045593.1| GTP-binding protein EngA [Escherichia coli B str. REL606]
 gi|254289246|ref|YP_003054994.1| GTP-binding protein EngA [Escherichia coli BL21(DE3)]
 gi|254794457|ref|YP_003079294.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. TW14359]
 gi|260845141|ref|YP_003222919.1| GTP-binding protein Der [Escherichia coli O103:H2 str. 12009]
 gi|260856605|ref|YP_003230496.1| GTP-binding protein EngA [Escherichia coli O26:H11 str. 11368]
 gi|260869200|ref|YP_003235602.1| putative GTP-binding protein Der [Escherichia coli O111:H- str.
           11128]
 gi|261223057|ref|ZP_05937338.1| 50S ribosome associated factor involved in the biogenesis and
           stability of 50S ribosomal subunits [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259392|ref|ZP_05951925.1| putative GTP-binding protein Der [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283732|ref|YP_003500550.1| GTP-binding protein engA [Escherichia coli O55:H7 str. CB9615]
 gi|293415776|ref|ZP_06658419.1| ribosome-associated GTPase EngA [Escherichia coli B185]
 gi|293446864|ref|ZP_06663286.1| ribosome-associated GTPase EngA [Escherichia coli B088]
 gi|301022369|ref|ZP_07186258.1| ribosome-associated GTPase EngA [Escherichia coli MS 196-1]
 gi|307312494|ref|ZP_07592127.1| ribosome-associated GTPase EngA [Escherichia coli W]
 gi|312973248|ref|ZP_07787420.1| small GTP-binding domain protein [Escherichia coli 1827-70]
 gi|331669257|ref|ZP_08370105.1| ribosome-associated GTPase EngA [Escherichia coli TA271]
 gi|378712028|ref|YP_005276921.1| ribosome-associated GTPase EngA [Escherichia coli KO11FL]
 gi|386281578|ref|ZP_10059240.1| GTPase Der [Escherichia sp. 4_1_40B]
 gi|386594720|ref|YP_006091120.1| small GTP-binding protein [Escherichia coli DH1]
 gi|386609913|ref|YP_006125399.1| GTP-binding protein [Escherichia coli W]
 gi|386615214|ref|YP_006134880.1| hypothetical protein UMNK88_3161 [Escherichia coli UMNK88]
 gi|386700543|ref|YP_006164380.1| GTP-binding protein Der [Escherichia coli KO11FL]
 gi|386705776|ref|YP_006169623.1| GTP-binding protein engA [Escherichia coli P12b]
 gi|386710401|ref|YP_006174122.1| GTP-binding protein Der [Escherichia coli W]
 gi|387613107|ref|YP_006116223.1| GTP-binding protein [Escherichia coli ETEC H10407]
 gi|387622211|ref|YP_006129839.1| GTP-binding protein engA [Escherichia coli DH1]
 gi|387883705|ref|YP_006314007.1| GTP-binding protein EngA [Escherichia coli Xuzhou21]
 gi|388478547|ref|YP_490739.1| GTP-binding protein [Escherichia coli str. K-12 substr. W3110]
 gi|404375852|ref|ZP_10981032.1| GTPase Der [Escherichia sp. 1_1_43]
 gi|407470407|ref|YP_006783150.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2009EL-2071]
 gi|407480931|ref|YP_006778080.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2011C-3493]
 gi|410481497|ref|YP_006769043.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2009EL-2050]
 gi|415778567|ref|ZP_11489613.1| small GTP-binding domain protein [Escherichia coli 3431]
 gi|415784561|ref|ZP_11492382.1| small GTP-binding domain protein [Escherichia coli EPECa14]
 gi|415803706|ref|ZP_11500685.1| small GTP-binding domain protein [Escherichia coli E128010]
 gi|415815177|ref|ZP_11506697.1| small GTP-binding domain protein [Escherichia coli LT-68]
 gi|415822432|ref|ZP_11511060.1| small GTP-binding domain protein [Escherichia coli OK1180]
 gi|415828724|ref|ZP_11515196.1| small GTP-binding domain protein [Escherichia coli OK1357]
 gi|416283491|ref|ZP_11646833.1| GTP-binding protein EngA [Shigella boydii ATCC 9905]
 gi|416309997|ref|ZP_11656196.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1044]
 gi|416321664|ref|ZP_11663512.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC1212]
 gi|416329938|ref|ZP_11669065.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1125]
 gi|416344043|ref|ZP_11677943.1| GTP-binding protein EngA [Escherichia coli EC4100B]
 gi|416775875|ref|ZP_11874611.1| GTP-binding protein Der [Escherichia coli O157:H7 str. G5101]
 gi|416787459|ref|ZP_11879523.1| GTP-binding protein Der [Escherichia coli O157:H- str. 493-89]
 gi|416799089|ref|ZP_11884438.1| GTP-binding protein Der [Escherichia coli O157:H- str. H 2687]
 gi|416809521|ref|ZP_11889123.1| GTP-binding protein Der [Escherichia coli O55:H7 str. 3256-97]
 gi|416820192|ref|ZP_11893681.1| GTP-binding protein Der [Escherichia coli O55:H7 str. USDA 5905]
 gi|416831012|ref|ZP_11898971.1| GTP-binding protein Der [Escherichia coli O157:H7 str. LSU-61]
 gi|417122159|ref|ZP_11971417.1| ribosome-associated GTPase EngA [Escherichia coli 97.0246]
 gi|417134397|ref|ZP_11979182.1| ribosome-associated GTPase EngA [Escherichia coli 5.0588]
 gi|417140800|ref|ZP_11983911.1| ribosome-associated GTPase EngA [Escherichia coli 97.0259]
 gi|417145952|ref|ZP_11986910.1| ribosome-associated GTPase EngA [Escherichia coli 1.2264]
 gi|417154959|ref|ZP_11993088.1| ribosome-associated GTPase EngA [Escherichia coli 96.0497]
 gi|417163678|ref|ZP_11998866.1| ribosome-associated GTPase EngA [Escherichia coli 99.0741]
 gi|417176086|ref|ZP_12005882.1| ribosome-associated GTPase EngA [Escherichia coli 3.2608]
 gi|417185144|ref|ZP_12010640.1| ribosome-associated GTPase EngA [Escherichia coli 93.0624]
 gi|417189178|ref|ZP_12012736.1| ribosome-associated GTPase EngA [Escherichia coli 4.0522]
 gi|417207703|ref|ZP_12019924.1| ribosome-associated GTPase EngA [Escherichia coli JB1-95]
 gi|417221201|ref|ZP_12024641.1| ribosome-associated GTPase EngA [Escherichia coli 96.154]
 gi|417231348|ref|ZP_12032746.1| ribosome-associated GTPase EngA [Escherichia coli 5.0959]
 gi|417237685|ref|ZP_12035416.1| ribosome-associated GTPase EngA [Escherichia coli 9.0111]
 gi|417251795|ref|ZP_12043560.1| ribosome-associated GTPase EngA [Escherichia coli 4.0967]
 gi|417261490|ref|ZP_12048978.1| ribosome-associated GTPase EngA [Escherichia coli 2.3916]
 gi|417269294|ref|ZP_12056654.1| ribosome-associated GTPase EngA [Escherichia coli 3.3884]
 gi|417272940|ref|ZP_12060289.1| ribosome-associated GTPase EngA [Escherichia coli 2.4168]
 gi|417278163|ref|ZP_12065479.1| ribosome-associated GTPase EngA [Escherichia coli 3.2303]
 gi|417290760|ref|ZP_12078041.1| ribosome-associated GTPase EngA [Escherichia coli B41]
 gi|417299962|ref|ZP_12087189.1| ribosome-associated GTPase EngA [Escherichia coli 900105 (10e)]
 gi|417308996|ref|ZP_12095837.1| GTPase Der [Escherichia coli PCN033]
 gi|417582014|ref|ZP_12232816.1| small GTP-binding domain protein [Escherichia coli STEC_B2F1]
 gi|417592846|ref|ZP_12243541.1| small GTP-binding domain protein [Escherichia coli 2534-86]
 gi|417597817|ref|ZP_12248453.1| small GTP-binding domain protein [Escherichia coli 3030-1]
 gi|417609136|ref|ZP_12259639.1| small GTP-binding domain protein [Escherichia coli STEC_DG131-3]
 gi|417613977|ref|ZP_12264435.1| small GTP-binding domain protein [Escherichia coli STEC_EH250]
 gi|417619095|ref|ZP_12269509.1| small GTP-binding domain protein [Escherichia coli G58-1]
 gi|417629810|ref|ZP_12280047.1| small GTP-binding domain protein [Escherichia coli STEC_MHI813]
 gi|417635483|ref|ZP_12285695.1| small GTP-binding domain protein [Escherichia coli STEC_S1191]
 gi|417640264|ref|ZP_12290405.1| small GTP-binding domain protein [Escherichia coli TX1999]
 gi|417667913|ref|ZP_12317458.1| small GTP-binding domain protein [Escherichia coli STEC_O31]
 gi|417708568|ref|ZP_12357599.1| small GTP-binding domain protein [Shigella flexneri VA-6]
 gi|417806062|ref|ZP_12453008.1| GTP-binding protein Der [Escherichia coli O104:H4 str. LB226692]
 gi|417833805|ref|ZP_12480252.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 01-09591]
 gi|417863150|ref|ZP_12508198.1| engA [Escherichia coli O104:H4 str. C227-11]
 gi|417943685|ref|ZP_12586932.1| GTP-binding protein Der [Escherichia coli XH140A]
 gi|417975808|ref|ZP_12616605.1| GTP-binding protein Der [Escherichia coli XH001]
 gi|418303960|ref|ZP_12915754.1| small GTP-binding domain protein [Escherichia coli UMNF18]
 gi|418941808|ref|ZP_13495120.1| GTP-binding protein Der [Escherichia coli O157:H43 str. T22]
 gi|419046239|ref|ZP_13593176.1| small GTP-binding domain protein [Escherichia coli DEC3A]
 gi|419052222|ref|ZP_13599093.1| small GTP-binding domain protein [Escherichia coli DEC3B]
 gi|419058257|ref|ZP_13605062.1| small GTP-binding domain protein [Escherichia coli DEC3C]
 gi|419063724|ref|ZP_13610451.1| small GTP-binding domain protein [Escherichia coli DEC3D]
 gi|419070622|ref|ZP_13616243.1| small GTP-binding domain protein [Escherichia coli DEC3E]
 gi|419076590|ref|ZP_13622104.1| small GTP-binding domain protein [Escherichia coli DEC3F]
 gi|419081703|ref|ZP_13627151.1| small GTP-binding domain protein [Escherichia coli DEC4A]
 gi|419087558|ref|ZP_13632914.1| small GTP-binding domain protein [Escherichia coli DEC4B]
 gi|419093314|ref|ZP_13638599.1| small GTP-binding domain protein [Escherichia coli DEC4C]
 gi|419099259|ref|ZP_13644456.1| small GTP-binding domain protein [Escherichia coli DEC4D]
 gi|419105075|ref|ZP_13650204.1| small GTP-binding domain protein [Escherichia coli DEC4E]
 gi|419110535|ref|ZP_13655591.1| small GTP-binding domain protein [Escherichia coli DEC4F]
 gi|419115894|ref|ZP_13660910.1| small GTP-binding domain protein [Escherichia coli DEC5A]
 gi|419121465|ref|ZP_13666421.1| small GTP-binding domain protein [Escherichia coli DEC5B]
 gi|419137561|ref|ZP_13682356.1| GTPase Der [Escherichia coli DEC5E]
 gi|419143461|ref|ZP_13688199.1| GTPase Der [Escherichia coli DEC6A]
 gi|419149140|ref|ZP_13693793.1| small GTP-binding domain protein [Escherichia coli DEC6B]
 gi|419154910|ref|ZP_13699471.1| GTPase Der [Escherichia coli DEC6C]
 gi|419160197|ref|ZP_13704702.1| GTPase Der [Escherichia coli DEC6D]
 gi|419165314|ref|ZP_13709770.1| small GTP-binding domain protein [Escherichia coli DEC6E]
 gi|419171180|ref|ZP_13715066.1| GTPase Der [Escherichia coli DEC7A]
 gi|419176082|ref|ZP_13719898.1| small GTP-binding domain protein [Escherichia coli DEC7B]
 gi|419181811|ref|ZP_13725424.1| small GTP-binding domain protein [Escherichia coli DEC7C]
 gi|419187258|ref|ZP_13730772.1| small GTP-binding domain protein [Escherichia coli DEC7D]
 gi|419192557|ref|ZP_13736009.1| GTPase Der [Escherichia coli DEC7E]
 gi|419198011|ref|ZP_13741397.1| GTPase Der [Escherichia coli DEC8A]
 gi|419204462|ref|ZP_13747642.1| small GTP-binding domain protein [Escherichia coli DEC8B]
 gi|419210740|ref|ZP_13753817.1| small GTP-binding domain protein [Escherichia coli DEC8C]
 gi|419216601|ref|ZP_13759600.1| small GTP-binding domain protein [Escherichia coli DEC8D]
 gi|419222520|ref|ZP_13765441.1| small GTP-binding domain protein [Escherichia coli DEC8E]
 gi|419227866|ref|ZP_13770717.1| small GTP-binding domain protein [Escherichia coli DEC9A]
 gi|419233455|ref|ZP_13776230.1| small GTP-binding domain protein [Escherichia coli DEC9B]
 gi|419238879|ref|ZP_13781594.1| small GTP-binding domain protein [Escherichia coli DEC9C]
 gi|419244356|ref|ZP_13786994.1| small GTP-binding domain protein [Escherichia coli DEC9D]
 gi|419250167|ref|ZP_13792746.1| small GTP-binding domain protein [Escherichia coli DEC9E]
 gi|419255993|ref|ZP_13798506.1| small GTP-binding domain protein [Escherichia coli DEC10A]
 gi|419262303|ref|ZP_13804717.1| small GTP-binding domain protein [Escherichia coli DEC10B]
 gi|419268213|ref|ZP_13810565.1| small GTP-binding domain protein [Escherichia coli DEC10C]
 gi|419273743|ref|ZP_13816038.1| small GTP-binding domain protein [Escherichia coli DEC10D]
 gi|419279044|ref|ZP_13821290.1| small GTP-binding domain protein [Escherichia coli DEC10E]
 gi|419285211|ref|ZP_13827382.1| small GTP-binding domain protein [Escherichia coli DEC10F]
 gi|419290439|ref|ZP_13832531.1| small GTP-binding domain protein [Escherichia coli DEC11A]
 gi|419295833|ref|ZP_13837876.1| small GTP-binding domain protein [Escherichia coli DEC11B]
 gi|419301228|ref|ZP_13843227.1| GTPase Der [Escherichia coli DEC11C]
 gi|419307356|ref|ZP_13849255.1| GTPase Der [Escherichia coli DEC11D]
 gi|419312366|ref|ZP_13854228.1| GTPase Der [Escherichia coli DEC11E]
 gi|419317802|ref|ZP_13859604.1| GTPase Der [Escherichia coli DEC12A]
 gi|419323951|ref|ZP_13865644.1| small GTP-binding domain protein [Escherichia coli DEC12B]
 gi|419329940|ref|ZP_13871544.1| GTPase Der [Escherichia coli DEC12C]
 gi|419335573|ref|ZP_13877098.1| small GTP-binding domain protein [Escherichia coli DEC12D]
 gi|419340950|ref|ZP_13882414.1| small GTP-binding domain protein [Escherichia coli DEC12E]
 gi|419370995|ref|ZP_13912114.1| GTPase Der [Escherichia coli DEC14A]
 gi|419376443|ref|ZP_13917467.1| small GTP-binding domain protein [Escherichia coli DEC14B]
 gi|419381780|ref|ZP_13922730.1| small GTP-binding domain protein [Escherichia coli DEC14C]
 gi|419387124|ref|ZP_13928002.1| small GTP-binding domain protein [Escherichia coli DEC14D]
 gi|419392629|ref|ZP_13933436.1| small GTP-binding domain protein [Escherichia coli DEC15A]
 gi|419397614|ref|ZP_13938382.1| small GTP-binding domain protein [Escherichia coli DEC15B]
 gi|419402956|ref|ZP_13943680.1| small GTP-binding domain protein [Escherichia coli DEC15C]
 gi|419408075|ref|ZP_13948764.1| small GTP-binding domain protein [Escherichia coli DEC15D]
 gi|419413664|ref|ZP_13954316.1| small GTP-binding domain protein [Escherichia coli DEC15E]
 gi|419810220|ref|ZP_14335102.1| GTP-binding protein Der [Escherichia coli O32:H37 str. P4]
 gi|419865997|ref|ZP_14388368.1| GTP-binding protein Der [Escherichia coli O103:H25 str. CVM9340]
 gi|419868346|ref|ZP_14390627.1| GTP-binding protein Der [Escherichia coli O103:H2 str. CVM9450]
 gi|419878639|ref|ZP_14400103.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9534]
 gi|419885689|ref|ZP_14406377.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9545]
 gi|419887602|ref|ZP_14408176.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9570]
 gi|419894063|ref|ZP_14414003.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9574]
 gi|419899544|ref|ZP_14419047.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM9942]
 gi|419906605|ref|ZP_14425495.1| ribosome-associated GTPase EngA [Escherichia coli O26:H11 str.
           CVM10026]
 gi|419931187|ref|ZP_14448775.1| GTP-binding protein EngA [Escherichia coli 541-1]
 gi|419939148|ref|ZP_14455949.1| GTP-binding protein EngA [Escherichia coli 75]
 gi|419950853|ref|ZP_14467058.1| GTP-binding protein EngA [Escherichia coli CUMT8]
 gi|420087417|ref|ZP_14599387.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9602]
 gi|420097596|ref|ZP_14608891.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9634]
 gi|420105083|ref|ZP_14615664.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9455]
 gi|420111504|ref|ZP_14621335.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9553]
 gi|420112679|ref|ZP_14622466.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM10021]
 gi|420119928|ref|ZP_14629171.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM10030]
 gi|420124629|ref|ZP_14633476.1| GTP-binding protein EngA [Escherichia coli O26:H11 str. CVM10224]
 gi|420134520|ref|ZP_14642625.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM9952]
 gi|420270738|ref|ZP_14773096.1| ribosome-associated GTPase EngA [Escherichia coli PA22]
 gi|420276513|ref|ZP_14778797.1| ribosome-associated GTPase EngA [Escherichia coli PA40]
 gi|420281704|ref|ZP_14783940.1| ribosome-associated GTPase EngA [Escherichia coli TW06591]
 gi|420287788|ref|ZP_14789974.1| ribosome-associated GTPase EngA [Escherichia coli TW10246]
 gi|420293541|ref|ZP_14795657.1| ribosome-associated GTPase EngA [Escherichia coli TW11039]
 gi|420299383|ref|ZP_14801432.1| ribosome-associated GTPase EngA [Escherichia coli TW09109]
 gi|420305395|ref|ZP_14807389.1| ribosome-associated GTPase EngA [Escherichia coli TW10119]
 gi|420310816|ref|ZP_14812749.1| ribosome-associated GTPase EngA [Escherichia coli EC1738]
 gi|420316126|ref|ZP_14818001.1| ribosome-associated GTPase EngA [Escherichia coli EC1734]
 gi|420331948|ref|ZP_14833605.1| GTPase Der [Shigella flexneri K-1770]
 gi|420386564|ref|ZP_14885913.1| GTPase Der [Escherichia coli EPECa12]
 gi|420392257|ref|ZP_14891508.1| small GTP-binding domain protein [Escherichia coli EPEC C342-62]
 gi|421774679|ref|ZP_16211291.1| ribosome-associated GTPase EngA [Escherichia coli AD30]
 gi|421813498|ref|ZP_16249216.1| ribosome-associated GTPase EngA [Escherichia coli 8.0416]
 gi|421819313|ref|ZP_16254809.1| ribosome-associated GTPase EngA [Escherichia coli 10.0821]
 gi|421825307|ref|ZP_16260665.1| ribosome-associated GTPase EngA [Escherichia coli FRIK920]
 gi|421832040|ref|ZP_16267327.1| ribosome-associated GTPase EngA [Escherichia coli PA7]
 gi|422761957|ref|ZP_16815714.1| ribosome GTPase EngA [Escherichia coli E1167]
 gi|422767160|ref|ZP_16820887.1| ribosome-associated GTPase EngA [Escherichia coli E1520]
 gi|422771585|ref|ZP_16825274.1| ribosome GTPase EngA [Escherichia coli E482]
 gi|422777770|ref|ZP_16831422.1| ribosome-associated GTPase EngA [Escherichia coli H120]
 gi|422792453|ref|ZP_16845153.1| ribosome GTPase EngA [Escherichia coli TA007]
 gi|422819337|ref|ZP_16867548.1| GTPase Der [Escherichia coli M919]
 gi|422835603|ref|ZP_16883657.1| GTP-binding protein engA [Escherichia coli E101]
 gi|422956110|ref|ZP_16968584.1| GTPase Der [Escherichia coli H494]
 gi|422988637|ref|ZP_16979410.1| GTPase Der [Escherichia coli O104:H4 str. C227-11]
 gi|422995529|ref|ZP_16986293.1| GTPase Der [Escherichia coli O104:H4 str. C236-11]
 gi|423000674|ref|ZP_16991428.1| GTPase Der [Escherichia coli O104:H4 str. 09-7901]
 gi|423004346|ref|ZP_16995092.1| GTPase Der [Escherichia coli O104:H4 str. 04-8351]
 gi|423010846|ref|ZP_17001580.1| GTPase Der [Escherichia coli O104:H4 str. 11-3677]
 gi|423020074|ref|ZP_17010783.1| GTPase Der [Escherichia coli O104:H4 str. 11-4404]
 gi|423025240|ref|ZP_17015937.1| GTPase Der [Escherichia coli O104:H4 str. 11-4522]
 gi|423031060|ref|ZP_17021748.1| GTPase Der [Escherichia coli O104:H4 str. 11-4623]
 gi|423038886|ref|ZP_17029560.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|423044006|ref|ZP_17034673.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|423045734|ref|ZP_17036394.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|423054273|ref|ZP_17043080.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|423061248|ref|ZP_17050044.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|423704110|ref|ZP_17678535.1| GTPase Der [Escherichia coli H730]
 gi|423706631|ref|ZP_17681014.1| GTPase Der [Escherichia coli B799]
 gi|423726222|ref|ZP_17700283.1| ribosome-associated GTPase EngA [Escherichia coli PA31]
 gi|424078599|ref|ZP_17815590.1| ribosome-associated GTPase EngA [Escherichia coli FDA505]
 gi|424085064|ref|ZP_17821567.1| ribosome-associated GTPase EngA [Escherichia coli FDA517]
 gi|424091473|ref|ZP_17827418.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1996]
 gi|424098095|ref|ZP_17833417.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1985]
 gi|424104328|ref|ZP_17839109.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1990]
 gi|424111000|ref|ZP_17845244.1| ribosome-associated GTPase EngA [Escherichia coli 93-001]
 gi|424116939|ref|ZP_17850787.1| ribosome-associated GTPase EngA [Escherichia coli PA3]
 gi|424123121|ref|ZP_17856452.1| ribosome-associated GTPase EngA [Escherichia coli PA5]
 gi|424135559|ref|ZP_17868031.1| ribosome-associated GTPase EngA [Escherichia coli PA10]
 gi|424148554|ref|ZP_17879938.1| ribosome-associated GTPase EngA [Escherichia coli PA15]
 gi|424154371|ref|ZP_17885335.1| ribosome-associated GTPase EngA [Escherichia coli PA24]
 gi|424250483|ref|ZP_17890898.1| ribosome-associated GTPase EngA [Escherichia coli PA25]
 gi|424328678|ref|ZP_17896810.1| ribosome-associated GTPase EngA [Escherichia coli PA28]
 gi|424450805|ref|ZP_17902520.1| ribosome-associated GTPase EngA [Escherichia coli PA32]
 gi|424457005|ref|ZP_17908151.1| ribosome-associated GTPase EngA [Escherichia coli PA33]
 gi|424463442|ref|ZP_17913890.1| ribosome-associated GTPase EngA [Escherichia coli PA39]
 gi|424469782|ref|ZP_17919615.1| ribosome-associated GTPase EngA [Escherichia coli PA41]
 gi|424476307|ref|ZP_17925632.1| ribosome-associated GTPase EngA [Escherichia coli PA42]
 gi|424482060|ref|ZP_17931050.1| ribosome-associated GTPase EngA [Escherichia coli TW07945]
 gi|424488220|ref|ZP_17936797.1| ribosome-associated GTPase EngA [Escherichia coli TW09098]
 gi|424494784|ref|ZP_17942519.1| ribosome-associated GTPase EngA [Escherichia coli TW09195]
 gi|424501590|ref|ZP_17948496.1| ribosome-associated GTPase EngA [Escherichia coli EC4203]
 gi|424507837|ref|ZP_17954242.1| ribosome-associated GTPase EngA [Escherichia coli EC4196]
 gi|424515158|ref|ZP_17959852.1| ribosome-associated GTPase EngA [Escherichia coli TW14313]
 gi|424521378|ref|ZP_17965515.1| ribosome-associated GTPase EngA [Escherichia coli TW14301]
 gi|424527271|ref|ZP_17970996.1| ribosome-associated GTPase EngA [Escherichia coli EC4421]
 gi|424533419|ref|ZP_17976778.1| ribosome-associated GTPase EngA [Escherichia coli EC4422]
 gi|424539519|ref|ZP_17982471.1| ribosome-associated GTPase EngA [Escherichia coli EC4013]
 gi|424545570|ref|ZP_17987985.1| ribosome-associated GTPase EngA [Escherichia coli EC4402]
 gi|424551810|ref|ZP_17993678.1| ribosome-associated GTPase EngA [Escherichia coli EC4439]
 gi|424557996|ref|ZP_17999422.1| ribosome-associated GTPase EngA [Escherichia coli EC4436]
 gi|424564342|ref|ZP_18005352.1| ribosome-associated GTPase EngA [Escherichia coli EC4437]
 gi|424570475|ref|ZP_18011038.1| ribosome-associated GTPase EngA [Escherichia coli EC4448]
 gi|424582461|ref|ZP_18022115.1| ribosome-associated GTPase EngA [Escherichia coli EC1863]
 gi|424754449|ref|ZP_18182363.1| GTP-binding protein EngA [Escherichia coli O26:H11 str.
           CFSAN001629]
 gi|424764622|ref|ZP_18192041.1| GTP-binding protein EngA [Escherichia coli O111:H11 str.
           CFSAN001630]
 gi|424772063|ref|ZP_18199178.1| GTP-binding protein EngA [Escherichia coli O111:H8 str.
           CFSAN001632]
 gi|425099168|ref|ZP_18501907.1| ribosome-associated GTPase EngA [Escherichia coli 3.4870]
 gi|425105227|ref|ZP_18507553.1| ribosome-associated GTPase EngA [Escherichia coli 5.2239]
 gi|425111242|ref|ZP_18513169.1| ribosome-associated GTPase EngA [Escherichia coli 6.0172]
 gi|425115988|ref|ZP_18517787.1| ribosome-associated GTPase EngA [Escherichia coli 8.0566]
 gi|425120753|ref|ZP_18522449.1| ribosome-associated GTPase EngA [Escherichia coli 8.0569]
 gi|425127167|ref|ZP_18528344.1| ribosome-associated GTPase EngA [Escherichia coli 8.0586]
 gi|425132900|ref|ZP_18533757.1| ribosome-associated GTPase EngA [Escherichia coli 8.2524]
 gi|425139407|ref|ZP_18539796.1| ribosome-associated GTPase EngA [Escherichia coli 10.0833]
 gi|425151310|ref|ZP_18550931.1| ribosome-associated GTPase EngA [Escherichia coli 88.0221]
 gi|425163532|ref|ZP_18562427.1| ribosome-associated GTPase EngA [Escherichia coli FDA506]
 gi|425169272|ref|ZP_18567756.1| ribosome-associated GTPase EngA [Escherichia coli FDA507]
 gi|425175337|ref|ZP_18573466.1| ribosome-associated GTPase EngA [Escherichia coli FDA504]
 gi|425181364|ref|ZP_18579070.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1999]
 gi|425194406|ref|ZP_18591185.1| ribosome-associated GTPase EngA [Escherichia coli NE1487]
 gi|425200882|ref|ZP_18597100.1| ribosome-associated GTPase EngA [Escherichia coli NE037]
 gi|425207264|ref|ZP_18603073.1| ribosome-associated GTPase EngA [Escherichia coli FRIK2001]
 gi|425213023|ref|ZP_18608433.1| ribosome-associated GTPase EngA [Escherichia coli PA4]
 gi|425219143|ref|ZP_18614120.1| ribosome-associated GTPase EngA [Escherichia coli PA23]
 gi|425225693|ref|ZP_18620170.1| ribosome-associated GTPase EngA [Escherichia coli PA49]
 gi|425231957|ref|ZP_18626006.1| ribosome-associated GTPase EngA [Escherichia coli PA45]
 gi|425237876|ref|ZP_18631605.1| ribosome-associated GTPase EngA [Escherichia coli TT12B]
 gi|425244091|ref|ZP_18637409.1| ribosome-associated GTPase EngA [Escherichia coli MA6]
 gi|425250255|ref|ZP_18643201.1| ribosome-associated GTPase EngA [Escherichia coli 5905]
 gi|425256084|ref|ZP_18648612.1| ribosome-associated GTPase EngA [Escherichia coli CB7326]
 gi|425262344|ref|ZP_18654361.1| ribosome-associated GTPase EngA [Escherichia coli EC96038]
 gi|425268341|ref|ZP_18659979.1| ribosome-associated GTPase EngA [Escherichia coli 5412]
 gi|425273661|ref|ZP_18665072.1| ribosome-associated GTPase EngA [Escherichia coli TW15901]
 gi|425284206|ref|ZP_18675244.1| ribosome-associated GTPase EngA [Escherichia coli TW00353]
 gi|425295775|ref|ZP_18685986.1| ribosome-associated GTPase EngA [Escherichia coli PA38]
 gi|425312481|ref|ZP_18701674.1| ribosome-associated GTPase EngA [Escherichia coli EC1735]
 gi|425318475|ref|ZP_18707273.1| ribosome-associated GTPase EngA [Escherichia coli EC1736]
 gi|425324543|ref|ZP_18712921.1| ribosome-associated GTPase EngA [Escherichia coli EC1737]
 gi|425330908|ref|ZP_18718773.1| ribosome-associated GTPase EngA [Escherichia coli EC1846]
 gi|425337084|ref|ZP_18724466.1| ribosome-associated GTPase EngA [Escherichia coli EC1847]
 gi|425343426|ref|ZP_18730325.1| ribosome-associated GTPase EngA [Escherichia coli EC1848]
 gi|425349235|ref|ZP_18735712.1| ribosome-associated GTPase EngA [Escherichia coli EC1849]
 gi|425355529|ref|ZP_18741604.1| ribosome-associated GTPase EngA [Escherichia coli EC1850]
 gi|425361492|ref|ZP_18747149.1| ribosome-associated GTPase EngA [Escherichia coli EC1856]
 gi|425367674|ref|ZP_18752844.1| ribosome-associated GTPase EngA [Escherichia coli EC1862]
 gi|425374024|ref|ZP_18758674.1| ribosome-associated GTPase EngA [Escherichia coli EC1864]
 gi|425380687|ref|ZP_18764704.1| ribosome-associated GTPase EngA [Escherichia coli EC1865]
 gi|425386913|ref|ZP_18770479.1| ribosome-associated GTPase EngA [Escherichia coli EC1866]
 gi|425393600|ref|ZP_18776715.1| ribosome-associated GTPase EngA [Escherichia coli EC1868]
 gi|425399699|ref|ZP_18782413.1| ribosome-associated GTPase EngA [Escherichia coli EC1869]
 gi|425405788|ref|ZP_18788019.1| ribosome-associated GTPase EngA [Escherichia coli EC1870]
 gi|425412178|ref|ZP_18793949.1| ribosome-associated GTPase EngA [Escherichia coli NE098]
 gi|425418499|ref|ZP_18799778.1| ribosome-associated GTPase EngA [Escherichia coli FRIK523]
 gi|425423355|ref|ZP_18804523.1| ribosome-associated GTPase EngA [Escherichia coli 0.1288]
 gi|425429760|ref|ZP_18810380.1| ribosome-associated GTPase EngA [Escherichia coli 0.1304]
 gi|428954276|ref|ZP_19026085.1| ribosome-associated GTPase EngA [Escherichia coli 88.1042]
 gi|428960241|ref|ZP_19031559.1| ribosome-associated GTPase EngA [Escherichia coli 89.0511]
 gi|428966865|ref|ZP_19037594.1| ribosome-associated GTPase EngA [Escherichia coli 90.0091]
 gi|428979063|ref|ZP_19048899.1| ribosome-associated GTPase EngA [Escherichia coli 90.2281]
 gi|428984875|ref|ZP_19054281.1| ribosome-associated GTPase EngA [Escherichia coli 93.0055]
 gi|428990989|ref|ZP_19059990.1| ribosome-associated GTPase EngA [Escherichia coli 93.0056]
 gi|428996855|ref|ZP_19065464.1| ribosome-associated GTPase EngA [Escherichia coli 94.0618]
 gi|429003101|ref|ZP_19071238.1| ribosome-associated GTPase EngA [Escherichia coli 95.0183]
 gi|429009186|ref|ZP_19076713.1| ribosome-associated GTPase EngA [Escherichia coli 95.1288]
 gi|429015715|ref|ZP_19082620.1| ribosome-associated GTPase EngA [Escherichia coli 95.0943]
 gi|429021544|ref|ZP_19088079.1| ribosome-associated GTPase EngA [Escherichia coli 96.0428]
 gi|429027648|ref|ZP_19093663.1| ribosome-associated GTPase EngA [Escherichia coli 96.0427]
 gi|429033836|ref|ZP_19099372.1| ribosome-associated GTPase EngA [Escherichia coli 96.0939]
 gi|429039894|ref|ZP_19105015.1| ribosome-associated GTPase EngA [Escherichia coli 96.0932]
 gi|429045701|ref|ZP_19110427.1| ribosome-associated GTPase EngA [Escherichia coli 96.0107]
 gi|429051224|ref|ZP_19115795.1| ribosome-associated GTPase EngA [Escherichia coli 97.0003]
 gi|429056598|ref|ZP_19120924.1| ribosome-associated GTPase EngA [Escherichia coli 97.1742]
 gi|429062095|ref|ZP_19126122.1| ribosome-associated GTPase EngA [Escherichia coli 97.0007]
 gi|429068370|ref|ZP_19131848.1| ribosome-associated GTPase EngA [Escherichia coli 99.0672]
 gi|429074318|ref|ZP_19137574.1| ribosome-associated GTPase EngA [Escherichia coli 99.0678]
 gi|429079512|ref|ZP_19142652.1| ribosome-associated GTPase EngA [Escherichia coli 99.0713]
 gi|429720101|ref|ZP_19255030.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429772002|ref|ZP_19304023.1| GTPase Der [Escherichia coli O104:H4 str. 11-02030]
 gi|429776947|ref|ZP_19308923.1| GTPase Der [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429785674|ref|ZP_19317570.1| GTPase Der [Escherichia coli O104:H4 str. 11-02092]
 gi|429791564|ref|ZP_19323419.1| GTPase Der [Escherichia coli O104:H4 str. 11-02093]
 gi|429792412|ref|ZP_19324262.1| GTPase Der [Escherichia coli O104:H4 str. 11-02281]
 gi|429798988|ref|ZP_19330787.1| GTPase Der [Escherichia coli O104:H4 str. 11-02318]
 gi|429807501|ref|ZP_19339226.1| GTPase Der [Escherichia coli O104:H4 str. 11-02913]
 gi|429812401|ref|ZP_19344085.1| GTPase Der [Escherichia coli O104:H4 str. 11-03439]
 gi|429817922|ref|ZP_19349561.1| GTPase Der [Escherichia coli O104:H4 str. 11-04080]
 gi|429823134|ref|ZP_19354729.1| GTPase Der [Escherichia coli O104:H4 str. 11-03943]
 gi|429827528|ref|ZP_19358582.1| ribosome-associated GTPase EngA [Escherichia coli 96.0109]
 gi|429833889|ref|ZP_19364251.1| ribosome-associated GTPase EngA [Escherichia coli 97.0010]
 gi|429904509|ref|ZP_19370488.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429908647|ref|ZP_19374611.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429914518|ref|ZP_19380466.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429919548|ref|ZP_19385480.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429925368|ref|ZP_19391282.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429929305|ref|ZP_19395207.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429935844|ref|ZP_19401730.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429941524|ref|ZP_19407398.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429944204|ref|ZP_19410067.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429951763|ref|ZP_19417609.1| GTPase Der [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429955112|ref|ZP_19420944.1| GTPase Der [Escherichia coli O104:H4 str. Ec12-0466]
 gi|432370734|ref|ZP_19613819.1| GTPase Der [Escherichia coli KTE10]
 gi|432377721|ref|ZP_19620710.1| GTPase Der [Escherichia coli KTE12]
 gi|432417992|ref|ZP_19660590.1| GTPase Der [Escherichia coli KTE44]
 gi|432450643|ref|ZP_19692905.1| GTPase Der [Escherichia coli KTE193]
 gi|432481861|ref|ZP_19723816.1| GTPase Der [Escherichia coli KTE210]
 gi|432544096|ref|ZP_19780938.1| GTPase Der [Escherichia coli KTE236]
 gi|432549587|ref|ZP_19786353.1| GTPase Der [Escherichia coli KTE237]
 gi|432564801|ref|ZP_19801381.1| GTPase Der [Escherichia coli KTE51]
 gi|432576774|ref|ZP_19813231.1| GTPase Der [Escherichia coli KTE56]
 gi|432622742|ref|ZP_19858770.1| GTPase Der [Escherichia coli KTE76]
 gi|432628135|ref|ZP_19864111.1| GTPase Der [Escherichia coli KTE77]
 gi|432637753|ref|ZP_19873622.1| GTPase Der [Escherichia coli KTE81]
 gi|432661722|ref|ZP_19897362.1| GTPase Der [Escherichia coli KTE111]
 gi|432671616|ref|ZP_19907144.1| GTPase Der [Escherichia coli KTE119]
 gi|432675635|ref|ZP_19911091.1| GTPase Der [Escherichia coli KTE142]
 gi|432686337|ref|ZP_19921632.1| GTPase Der [Escherichia coli KTE156]
 gi|432692459|ref|ZP_19927686.1| GTPase Der [Escherichia coli KTE161]
 gi|432705289|ref|ZP_19940388.1| GTPase Der [Escherichia coli KTE171]
 gi|432738002|ref|ZP_19972759.1| GTPase Der [Escherichia coli KTE42]
 gi|432765869|ref|ZP_20000307.1| GTPase Der [Escherichia coli KTE48]
 gi|432806691|ref|ZP_20040619.1| GTPase Der [Escherichia coli KTE91]
 gi|432810180|ref|ZP_20044073.1| GTPase Der [Escherichia coli KTE101]
 gi|432816238|ref|ZP_20050021.1| GTPase Der [Escherichia coli KTE115]
 gi|432832568|ref|ZP_20066140.1| GTPase Der [Escherichia coli KTE135]
 gi|432835465|ref|ZP_20069003.1| GTPase Der [Escherichia coli KTE136]
 gi|432869847|ref|ZP_20090440.1| GTPase Der [Escherichia coli KTE147]
 gi|432876256|ref|ZP_20094296.1| GTPase Der [Escherichia coli KTE154]
 gi|432935408|ref|ZP_20134762.1| GTPase Der [Escherichia coli KTE184]
 gi|432948358|ref|ZP_20143514.1| GTPase Der [Escherichia coli KTE196]
 gi|432956065|ref|ZP_20147884.1| GTPase Der [Escherichia coli KTE197]
 gi|432968590|ref|ZP_20157504.1| GTPase Der [Escherichia coli KTE203]
 gi|433034337|ref|ZP_20222046.1| GTPase Der [Escherichia coli KTE112]
 gi|433044063|ref|ZP_20231557.1| GTPase Der [Escherichia coli KTE117]
 gi|433048927|ref|ZP_20236274.1| GTPase Der [Escherichia coli KTE120]
 gi|433092885|ref|ZP_20279149.1| GTPase Der [Escherichia coli KTE138]
 gi|433131053|ref|ZP_20316488.1| GTPase Der [Escherichia coli KTE163]
 gi|433135721|ref|ZP_20321062.1| GTPase Der [Escherichia coli KTE166]
 gi|433194568|ref|ZP_20378554.1| GTPase Der [Escherichia coli KTE90]
 gi|442592530|ref|ZP_21010505.1| GTP-binding protein EngA [Escherichia coli O10:K5(L):H4 str. ATCC
           23506]
 gi|442599042|ref|ZP_21016777.1| GTP-binding protein EngA [Escherichia coli O5:K4(L):H4 str. ATCC
           23502]
 gi|443618566|ref|YP_007382422.1| GTP-binding protein Der [Escherichia coli APEC O78]
 gi|444926063|ref|ZP_21245366.1| ribosome-associated GTPase EngA [Escherichia coli 09BKT078844]
 gi|444931773|ref|ZP_21250818.1| ribosome-associated GTPase EngA [Escherichia coli 99.0814]
 gi|444937223|ref|ZP_21256004.1| ribosome-associated GTPase EngA [Escherichia coli 99.0815]
 gi|444942854|ref|ZP_21261376.1| ribosome-associated GTPase EngA [Escherichia coli 99.0816]
 gi|444948232|ref|ZP_21266547.1| ribosome-associated GTPase EngA [Escherichia coli 99.0839]
 gi|444959407|ref|ZP_21277264.1| ribosome-associated GTPase EngA [Escherichia coli 99.1753]
 gi|444975826|ref|ZP_21292954.1| ribosome-associated GTPase EngA [Escherichia coli 99.1805]
 gi|444981209|ref|ZP_21298125.1| ribosome-associated GTPase EngA [Escherichia coli ATCC 700728]
 gi|444986604|ref|ZP_21303389.1| ribosome-associated GTPase EngA [Escherichia coli PA11]
 gi|444991919|ref|ZP_21308566.1| ribosome-associated GTPase EngA [Escherichia coli PA19]
 gi|444997225|ref|ZP_21313727.1| ribosome-associated GTPase EngA [Escherichia coli PA13]
 gi|445002802|ref|ZP_21319195.1| ribosome-associated GTPase EngA [Escherichia coli PA2]
 gi|445008240|ref|ZP_21324483.1| ribosome-associated GTPase EngA [Escherichia coli PA47]
 gi|445013335|ref|ZP_21329446.1| ribosome-associated GTPase EngA [Escherichia coli PA48]
 gi|445019200|ref|ZP_21335169.1| ribosome-associated GTPase EngA [Escherichia coli PA8]
 gi|445024656|ref|ZP_21340484.1| ribosome-associated GTPase EngA [Escherichia coli 7.1982]
 gi|445029991|ref|ZP_21345670.1| ribosome-associated GTPase EngA [Escherichia coli 99.1781]
 gi|445035459|ref|ZP_21350995.1| ribosome-associated GTPase EngA [Escherichia coli 99.1762]
 gi|445041083|ref|ZP_21356460.1| ribosome-associated GTPase EngA [Escherichia coli PA35]
 gi|445051825|ref|ZP_21366876.1| ribosome-associated GTPase EngA [Escherichia coli 95.0083]
 gi|445057597|ref|ZP_21372459.1| ribosome-associated GTPase EngA [Escherichia coli 99.0670]
 gi|450219663|ref|ZP_21896205.1| GTP-binding protein EngA [Escherichia coli O08]
 gi|450246564|ref|ZP_21901001.1| GTP-binding protein EngA [Escherichia coli S17]
 gi|452971711|ref|ZP_21969938.1| GTP-binding protein Der [Escherichia coli O157:H7 str. EC4009]
 gi|68566316|sp|P0A6P5.1|DER_ECOLI RecName: Full=GTPase Der; AltName: Full=Double era-like domain
           protein; AltName: Full=GTP-binding protein EngA
 gi|68566317|sp|P0A6P6.1|DER_ECO57 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166920098|sp|A7ZPV4.1|DER_ECO24 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166920099|sp|A8A317.1|DER_ECOHS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|189037147|sp|B1IWF0.1|DER_ECOLC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|226741138|sp|B7M7L5.1|DER_ECO8A RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|229784133|sp|B1XAY6.1|DER_ECODH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|238058973|sp|B5Z0Y0.1|DER_ECO5E RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|238058974|sp|B6I583.1|DER_ECOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|254783153|sp|B7LCQ1.1|DER_ECO55 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|259645873|sp|C4ZX86.1|DER_ECOBW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|85675433|dbj|BAA16397.2| predicted GTP-binding protein [Escherichia coli str. K12 substr.
           W3110]
 gi|87082120|gb|AAC75564.2| GTPase; multicopy suppressor of ftsJ [Escherichia coli str. K-12
           substr. MG1655]
 gi|157067666|gb|ABV06921.1| GTP-binding protein EngA [Escherichia coli HS]
 gi|157078758|gb|ABV18466.1| GTP-binding protein EngA [Escherichia coli E24377A]
 gi|169754134|gb|ACA76833.1| small GTP-binding protein [Escherichia coli ATCC 8739]
 gi|169889956|gb|ACB03663.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187770576|gb|EDU34420.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017037|gb|EDU55159.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4113]
 gi|188489820|gb|EDU64923.1| GTP-binding protein EngA [Escherichia coli 53638]
 gi|189003270|gb|EDU72256.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4076]
 gi|189356591|gb|EDU75010.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4401]
 gi|189362188|gb|EDU80607.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368460|gb|EDU86876.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4501]
 gi|189372347|gb|EDU90763.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC869]
 gi|189378586|gb|EDU97002.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC508]
 gi|190902271|gb|EDV62011.1| ribosome-associated GTPase EngA [Escherichia coli B7A]
 gi|192929261|gb|EDV82870.1| ribosome-associated GTPase EngA [Escherichia coli E22]
 gi|194414623|gb|EDX30895.1| ribosome-associated GTPase EngA [Escherichia coli B171]
 gi|194423378|gb|EDX39369.1| ribosome-associated GTPase EngA [Escherichia coli 101-1]
 gi|208735615|gb|EDZ84302.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741557|gb|EDZ89239.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4042]
 gi|209161078|gb|ACI38511.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           EC4115]
 gi|209913247|dbj|BAG78321.1| putative GTP-binding protein [Escherichia coli SE11]
 gi|217319280|gb|EEC27705.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
           TW14588]
 gi|218352870|emb|CAU98669.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
           coli 55989]
 gi|218361804|emb|CAQ99403.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
           coli IAI1]
 gi|238862452|gb|ACR64450.1| predicted GTP-binding protein [Escherichia coli BW2952]
 gi|242378109|emb|CAQ32882.1| 50S ribosomal subunit stability factor [Escherichia coli BL21(DE3)]
 gi|253323639|gb|ACT28241.1| small GTP-binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974386|gb|ACT40057.1| GTP-binding protein EngA [Escherichia coli B str. REL606]
 gi|253978553|gb|ACT44223.1| GTP-binding protein EngA [Escherichia coli BL21(DE3)]
 gi|254593857|gb|ACT73218.1| 50S ribosome associated factor involved in the biogenesis and
           stability of 50S ribosomal subunits [Escherichia coli
           O157:H7 str. TW14359]
 gi|257755254|dbj|BAI26756.1| predicted GTP-binding protein Der [Escherichia coli O26:H11 str.
           11368]
 gi|257760288|dbj|BAI31785.1| predicted GTP-binding protein Der [Escherichia coli O103:H2 str.
           12009]
 gi|257765556|dbj|BAI37051.1| predicted GTP-binding protein Der [Escherichia coli O111:H- str.
           11128]
 gi|260448409|gb|ACX38831.1| small GTP-binding protein [Escherichia coli DH1]
 gi|290763605|gb|ADD57566.1| GTP-binding protein engA [Escherichia coli O55:H7 str. CB9615]
 gi|291323694|gb|EFE63122.1| ribosome-associated GTPase EngA [Escherichia coli B088]
 gi|291433424|gb|EFF06403.1| ribosome-associated GTPase EngA [Escherichia coli B185]
 gi|299881282|gb|EFI89493.1| ribosome-associated GTPase EngA [Escherichia coli MS 196-1]
 gi|306907417|gb|EFN37921.1| ribosome-associated GTPase EngA [Escherichia coli W]
 gi|309702843|emb|CBJ02174.1| GTP-binding protein [Escherichia coli ETEC H10407]
 gi|310331843|gb|EFP99078.1| small GTP-binding domain protein [Escherichia coli 1827-70]
 gi|315061830|gb|ADT76157.1| predicted GTP-binding protein [Escherichia coli W]
 gi|315137135|dbj|BAJ44294.1| GTP-binding protein engA [Escherichia coli DH1]
 gi|315615770|gb|EFU96402.1| small GTP-binding domain protein [Escherichia coli 3431]
 gi|320180501|gb|EFW55432.1| GTP-binding protein EngA [Shigella boydii ATCC 9905]
 gi|320188844|gb|EFW63503.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC1212]
 gi|320200075|gb|EFW74664.1| GTP-binding protein EngA [Escherichia coli EC4100B]
 gi|320640855|gb|EFX10343.1| GTP-binding protein Der [Escherichia coli O157:H7 str. G5101]
 gi|320646298|gb|EFX15225.1| GTP-binding protein Der [Escherichia coli O157:H- str. 493-89]
 gi|320651803|gb|EFX20183.1| GTP-binding protein Der [Escherichia coli O157:H- str. H 2687]
 gi|320657189|gb|EFX24998.1| GTP-binding protein Der [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662795|gb|EFX30127.1| GTP-binding protein Der [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667599|gb|EFX34514.1| GTP-binding protein Der [Escherichia coli O157:H7 str. LSU-61]
 gi|323156165|gb|EFZ42324.1| small GTP-binding domain protein [Escherichia coli EPECa14]
 gi|323159381|gb|EFZ45366.1| small GTP-binding domain protein [Escherichia coli E128010]
 gi|323170218|gb|EFZ55871.1| small GTP-binding domain protein [Escherichia coli LT-68]
 gi|323177365|gb|EFZ62953.1| small GTP-binding domain protein [Escherichia coli OK1180]
 gi|323184428|gb|EFZ69803.1| small GTP-binding domain protein [Escherichia coli OK1357]
 gi|323377589|gb|ADX49857.1| ribosome-associated GTPase EngA [Escherichia coli KO11FL]
 gi|323936404|gb|EGB32694.1| ribosome-associated GTPase EngA [Escherichia coli E1520]
 gi|323941227|gb|EGB37412.1| ribosome GTPase EngA [Escherichia coli E482]
 gi|323944733|gb|EGB40800.1| ribosome-associated GTPase EngA [Escherichia coli H120]
 gi|323971076|gb|EGB66324.1| ribosome GTPase EngA [Escherichia coli TA007]
 gi|324118145|gb|EGC12042.1| ribosome GTPase EngA [Escherichia coli E1167]
 gi|326340309|gb|EGD64113.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1125]
 gi|326344993|gb|EGD68737.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1044]
 gi|331064451|gb|EGI36362.1| ribosome-associated GTPase EngA [Escherichia coli TA271]
 gi|332344383|gb|AEE57717.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|333000699|gb|EGK20275.1| small GTP-binding domain protein [Shigella flexneri VA-6]
 gi|338769624|gb|EGP24403.1| GTPase Der [Escherichia coli PCN033]
 gi|339416058|gb|AEJ57730.1| small GTP-binding domain protein [Escherichia coli UMNF18]
 gi|340733449|gb|EGR62580.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 01-09591]
 gi|340739357|gb|EGR73592.1| GTP-binding protein Der [Escherichia coli O104:H4 str. LB226692]
 gi|341916439|gb|EGT66056.1| engA [Escherichia coli O104:H4 str. C227-11]
 gi|342364547|gb|EGU28647.1| GTP-binding protein Der [Escherichia coli XH140A]
 gi|344194577|gb|EGV48650.1| GTP-binding protein Der [Escherichia coli XH001]
 gi|345337021|gb|EGW69454.1| small GTP-binding domain protein [Escherichia coli 2534-86]
 gi|345337785|gb|EGW70217.1| small GTP-binding domain protein [Escherichia coli STEC_B2F1]
 gi|345352614|gb|EGW84860.1| small GTP-binding domain protein [Escherichia coli 3030-1]
 gi|345358345|gb|EGW90533.1| small GTP-binding domain protein [Escherichia coli STEC_DG131-3]
 gi|345362171|gb|EGW94328.1| small GTP-binding domain protein [Escherichia coli STEC_EH250]
 gi|345372557|gb|EGX04521.1| small GTP-binding domain protein [Escherichia coli STEC_MHI813]
 gi|345375809|gb|EGX07756.1| small GTP-binding domain protein [Escherichia coli G58-1]
 gi|345387023|gb|EGX16852.1| small GTP-binding domain protein [Escherichia coli STEC_S1191]
 gi|345393266|gb|EGX23044.1| small GTP-binding domain protein [Escherichia coli TX1999]
 gi|354862364|gb|EHF22802.1| GTPase Der [Escherichia coli O104:H4 str. C236-11]
 gi|354867648|gb|EHF28070.1| GTPase Der [Escherichia coli O104:H4 str. C227-11]
 gi|354868749|gb|EHF29162.1| GTPase Der [Escherichia coli O104:H4 str. 04-8351]
 gi|354873645|gb|EHF34022.1| GTPase Der [Escherichia coli O104:H4 str. 09-7901]
 gi|354880329|gb|EHF40665.1| GTPase Der [Escherichia coli O104:H4 str. 11-3677]
 gi|354889118|gb|EHF49371.1| GTPase Der [Escherichia coli O104:H4 str. 11-4404]
 gi|354893348|gb|EHF53552.1| GTPase Der [Escherichia coli O104:H4 str. 11-4522]
 gi|354894299|gb|EHF54495.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|354897091|gb|EHF57252.1| GTPase Der [Escherichia coli O104:H4 str. 11-4623]
 gi|354898455|gb|EHF58609.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|354912223|gb|EHF72224.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|354915179|gb|EHF75159.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|354917413|gb|EHF77379.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|359332820|dbj|BAL39267.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr.
           MDS42]
 gi|371600408|gb|EHN89182.1| GTPase Der [Escherichia coli H494]
 gi|371612215|gb|EHO00731.1| GTP-binding protein engA [Escherichia coli E101]
 gi|375322865|gb|EHS68598.1| GTP-binding protein Der [Escherichia coli O157:H43 str. T22]
 gi|377892851|gb|EHU57291.1| small GTP-binding domain protein [Escherichia coli DEC3B]
 gi|377893069|gb|EHU57508.1| small GTP-binding domain protein [Escherichia coli DEC3A]
 gi|377904844|gb|EHU69122.1| small GTP-binding domain protein [Escherichia coli DEC3C]
 gi|377909364|gb|EHU73566.1| small GTP-binding domain protein [Escherichia coli DEC3D]
 gi|377911596|gb|EHU75765.1| small GTP-binding domain protein [Escherichia coli DEC3E]
 gi|377920987|gb|EHU85001.1| small GTP-binding domain protein [Escherichia coli DEC3F]
 gi|377926333|gb|EHU90268.1| small GTP-binding domain protein [Escherichia coli DEC4A]
 gi|377929813|gb|EHU93701.1| small GTP-binding domain protein [Escherichia coli DEC4B]
 gi|377941375|gb|EHV05115.1| small GTP-binding domain protein [Escherichia coli DEC4D]
 gi|377941756|gb|EHV05493.1| small GTP-binding domain protein [Escherichia coli DEC4C]
 gi|377947558|gb|EHV11225.1| small GTP-binding domain protein [Escherichia coli DEC4E]
 gi|377956791|gb|EHV20334.1| small GTP-binding domain protein [Escherichia coli DEC4F]
 gi|377960003|gb|EHV23494.1| small GTP-binding domain protein [Escherichia coli DEC5A]
 gi|377966689|gb|EHV30100.1| small GTP-binding domain protein [Escherichia coli DEC5B]
 gi|377983978|gb|EHV47219.1| GTPase Der [Escherichia coli DEC5E]
 gi|377992262|gb|EHV55409.1| small GTP-binding domain protein [Escherichia coli DEC6B]
 gi|377993974|gb|EHV57105.1| GTPase Der [Escherichia coli DEC6A]
 gi|377995843|gb|EHV58954.1| GTPase Der [Escherichia coli DEC6C]
 gi|378007541|gb|EHV70510.1| GTPase Der [Escherichia coli DEC6D]
 gi|378009766|gb|EHV72720.1| small GTP-binding domain protein [Escherichia coli DEC6E]
 gi|378015224|gb|EHV78121.1| GTPase Der [Escherichia coli DEC7A]
 gi|378023444|gb|EHV86121.1| small GTP-binding domain protein [Escherichia coli DEC7C]
 gi|378029250|gb|EHV91866.1| small GTP-binding domain protein [Escherichia coli DEC7D]
 gi|378032054|gb|EHV94636.1| small GTP-binding domain protein [Escherichia coli DEC7B]
 gi|378037910|gb|EHW00432.1| GTPase Der [Escherichia coli DEC7E]
 gi|378046568|gb|EHW08947.1| GTPase Der [Escherichia coli DEC8A]
 gi|378047583|gb|EHW09945.1| small GTP-binding domain protein [Escherichia coli DEC8B]
 gi|378053436|gb|EHW15736.1| small GTP-binding domain protein [Escherichia coli DEC8C]
 gi|378060792|gb|EHW22980.1| small GTP-binding domain protein [Escherichia coli DEC8D]
 gi|378065095|gb|EHW27245.1| small GTP-binding domain protein [Escherichia coli DEC8E]
 gi|378073264|gb|EHW35317.1| small GTP-binding domain protein [Escherichia coli DEC9A]
 gi|378076514|gb|EHW38518.1| small GTP-binding domain protein [Escherichia coli DEC9B]
 gi|378083918|gb|EHW45849.1| small GTP-binding domain protein [Escherichia coli DEC9C]
 gi|378090292|gb|EHW52132.1| small GTP-binding domain protein [Escherichia coli DEC9D]
 gi|378094142|gb|EHW55944.1| small GTP-binding domain protein [Escherichia coli DEC9E]
 gi|378099459|gb|EHW61165.1| small GTP-binding domain protein [Escherichia coli DEC10A]
 gi|378104983|gb|EHW66631.1| small GTP-binding domain protein [Escherichia coli DEC10B]
 gi|378110864|gb|EHW72458.1| small GTP-binding domain protein [Escherichia coli DEC10C]
 gi|378116230|gb|EHW77763.1| small GTP-binding domain protein [Escherichia coli DEC10D]
 gi|378127745|gb|EHW89133.1| small GTP-binding domain protein [Escherichia coli DEC10E]
 gi|378130240|gb|EHW91610.1| small GTP-binding domain protein [Escherichia coli DEC11A]
 gi|378130555|gb|EHW91919.1| small GTP-binding domain protein [Escherichia coli DEC10F]
 gi|378140558|gb|EHX01781.1| small GTP-binding domain protein [Escherichia coli DEC11B]
 gi|378148339|gb|EHX09479.1| GTPase Der [Escherichia coli DEC11D]
 gi|378150844|gb|EHX11959.1| GTPase Der [Escherichia coli DEC11C]
 gi|378157994|gb|EHX19025.1| GTPase Der [Escherichia coli DEC11E]
 gi|378165027|gb|EHX25968.1| small GTP-binding domain protein [Escherichia coli DEC12B]
 gi|378168495|gb|EHX29399.1| GTPase Der [Escherichia coli DEC12A]
 gi|378170256|gb|EHX31142.1| GTPase Der [Escherichia coli DEC12C]
 gi|378181005|gb|EHX41682.1| small GTP-binding domain protein [Escherichia coli DEC12D]
 gi|378187861|gb|EHX48472.1| small GTP-binding domain protein [Escherichia coli DEC12E]
 gi|378217589|gb|EHX77868.1| GTPase Der [Escherichia coli DEC14A]
 gi|378219166|gb|EHX79435.1| small GTP-binding domain protein [Escherichia coli DEC14B]
 gi|378227423|gb|EHX87595.1| small GTP-binding domain protein [Escherichia coli DEC14C]
 gi|378231651|gb|EHX91762.1| small GTP-binding domain protein [Escherichia coli DEC14D]
 gi|378236823|gb|EHX96862.1| small GTP-binding domain protein [Escherichia coli DEC15A]
 gi|378243735|gb|EHY03681.1| small GTP-binding domain protein [Escherichia coli DEC15B]
 gi|378247490|gb|EHY07409.1| small GTP-binding domain protein [Escherichia coli DEC15C]
 gi|378254454|gb|EHY14318.1| small GTP-binding domain protein [Escherichia coli DEC15D]
 gi|378259096|gb|EHY18912.1| small GTP-binding domain protein [Escherichia coli DEC15E]
 gi|383103944|gb|AFG41453.1| GTP-binding protein engA [Escherichia coli P12b]
 gi|383392070|gb|AFH17028.1| GTP-binding protein Der [Escherichia coli KO11FL]
 gi|383406093|gb|AFH12336.1| GTP-binding protein Der [Escherichia coli W]
 gi|385156942|gb|EIF18936.1| GTP-binding protein Der [Escherichia coli O32:H37 str. P4]
 gi|385537116|gb|EIF83999.1| GTPase Der [Escherichia coli M919]
 gi|385707226|gb|EIG44258.1| GTPase Der [Escherichia coli H730]
 gi|385711596|gb|EIG48554.1| GTPase Der [Escherichia coli B799]
 gi|386121717|gb|EIG70332.1| GTPase Der [Escherichia sp. 4_1_40B]
 gi|386147439|gb|EIG93879.1| ribosome-associated GTPase EngA [Escherichia coli 97.0246]
 gi|386152251|gb|EIH03540.1| ribosome-associated GTPase EngA [Escherichia coli 5.0588]
 gi|386156133|gb|EIH12480.1| ribosome-associated GTPase EngA [Escherichia coli 97.0259]
 gi|386163404|gb|EIH25199.1| ribosome-associated GTPase EngA [Escherichia coli 1.2264]
 gi|386168048|gb|EIH34564.1| ribosome-associated GTPase EngA [Escherichia coli 96.0497]
 gi|386172903|gb|EIH44917.1| ribosome-associated GTPase EngA [Escherichia coli 99.0741]
 gi|386178778|gb|EIH56257.1| ribosome-associated GTPase EngA [Escherichia coli 3.2608]
 gi|386183206|gb|EIH65957.1| ribosome-associated GTPase EngA [Escherichia coli 93.0624]
 gi|386192723|gb|EIH81447.1| ribosome-associated GTPase EngA [Escherichia coli 4.0522]
 gi|386197017|gb|EIH91225.1| ribosome-associated GTPase EngA [Escherichia coli JB1-95]
 gi|386201003|gb|EIH99993.1| ribosome-associated GTPase EngA [Escherichia coli 96.154]
 gi|386204347|gb|EII08858.1| ribosome-associated GTPase EngA [Escherichia coli 5.0959]
 gi|386213463|gb|EII23888.1| ribosome-associated GTPase EngA [Escherichia coli 9.0111]
 gi|386218644|gb|EII35127.1| ribosome-associated GTPase EngA [Escherichia coli 4.0967]
 gi|386224617|gb|EII46952.1| ribosome-associated GTPase EngA [Escherichia coli 2.3916]
 gi|386228099|gb|EII55455.1| ribosome-associated GTPase EngA [Escherichia coli 3.3884]
 gi|386236640|gb|EII68616.1| ribosome-associated GTPase EngA [Escherichia coli 2.4168]
 gi|386239131|gb|EII76065.1| ribosome-associated GTPase EngA [Escherichia coli 3.2303]
 gi|386253082|gb|EIJ02772.1| ribosome-associated GTPase EngA [Escherichia coli B41]
 gi|386256797|gb|EIJ12291.1| ribosome-associated GTPase EngA [Escherichia coli 900105 (10e)]
 gi|386797163|gb|AFJ30197.1| GTP-binding protein EngA [Escherichia coli Xuzhou21]
 gi|388334444|gb|EIL01035.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9534]
 gi|388336178|gb|EIL02725.1| GTP-binding protein Der [Escherichia coli O103:H25 str. CVM9340]
 gi|388344972|gb|EIL10768.1| GTP-binding protein Der [Escherichia coli O103:H2 str. CVM9450]
 gi|388348465|gb|EIL14060.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9545]
 gi|388362470|gb|EIL26477.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9570]
 gi|388365269|gb|EIL29072.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9574]
 gi|388378699|gb|EIL41413.1| ribosome-associated GTPase EngA [Escherichia coli O26:H11 str.
           CVM10026]
 gi|388379681|gb|EIL42328.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM9942]
 gi|388398922|gb|EIL59733.1| GTP-binding protein EngA [Escherichia coli 541-1]
 gi|388408639|gb|EIL68980.1| GTP-binding protein EngA [Escherichia coli 75]
 gi|388415959|gb|EIL75866.1| GTP-binding protein EngA [Escherichia coli CUMT8]
 gi|390641260|gb|EIN20692.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1996]
 gi|390642790|gb|EIN22179.1| ribosome-associated GTPase EngA [Escherichia coli FDA517]
 gi|390643578|gb|EIN22917.1| ribosome-associated GTPase EngA [Escherichia coli FDA505]
 gi|390659988|gb|EIN37725.1| ribosome-associated GTPase EngA [Escherichia coli 93-001]
 gi|390661291|gb|EIN38950.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1985]
 gi|390663144|gb|EIN40669.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1990]
 gi|390676905|gb|EIN52983.1| ribosome-associated GTPase EngA [Escherichia coli PA3]
 gi|390680256|gb|EIN56111.1| ribosome-associated GTPase EngA [Escherichia coli PA5]
 gi|390695820|gb|EIN70331.1| ribosome-associated GTPase EngA [Escherichia coli PA10]
 gi|390700299|gb|EIN74610.1| ribosome-associated GTPase EngA [Escherichia coli PA15]
 gi|390714250|gb|EIN87164.1| ribosome-associated GTPase EngA [Escherichia coli PA22]
 gi|390722195|gb|EIN94884.1| ribosome-associated GTPase EngA [Escherichia coli PA25]
 gi|390723587|gb|EIN96175.1| ribosome-associated GTPase EngA [Escherichia coli PA24]
 gi|390726637|gb|EIN99075.1| ribosome-associated GTPase EngA [Escherichia coli PA28]
 gi|390741714|gb|EIO12768.1| ribosome-associated GTPase EngA [Escherichia coli PA31]
 gi|390742180|gb|EIO13196.1| ribosome-associated GTPase EngA [Escherichia coli PA32]
 gi|390744867|gb|EIO15708.1| ribosome-associated GTPase EngA [Escherichia coli PA33]
 gi|390757923|gb|EIO27393.1| ribosome-associated GTPase EngA [Escherichia coli PA40]
 gi|390766952|gb|EIO36061.1| ribosome-associated GTPase EngA [Escherichia coli PA41]
 gi|390768087|gb|EIO37135.1| ribosome-associated GTPase EngA [Escherichia coli PA39]
 gi|390768587|gb|EIO37618.1| ribosome-associated GTPase EngA [Escherichia coli PA42]
 gi|390781041|gb|EIO48730.1| ribosome-associated GTPase EngA [Escherichia coli TW06591]
 gi|390789527|gb|EIO56976.1| ribosome-associated GTPase EngA [Escherichia coli TW10246]
 gi|390789906|gb|EIO57335.1| ribosome-associated GTPase EngA [Escherichia coli TW07945]
 gi|390795864|gb|EIO63141.1| ribosome-associated GTPase EngA [Escherichia coli TW11039]
 gi|390805353|gb|EIO72300.1| ribosome-associated GTPase EngA [Escherichia coli TW09098]
 gi|390807078|gb|EIO73980.1| ribosome-associated GTPase EngA [Escherichia coli TW09109]
 gi|390815700|gb|EIO82228.1| ribosome-associated GTPase EngA [Escherichia coli TW10119]
 gi|390825566|gb|EIO91485.1| ribosome-associated GTPase EngA [Escherichia coli EC4203]
 gi|390830037|gb|EIO95614.1| ribosome-associated GTPase EngA [Escherichia coli TW09195]
 gi|390830268|gb|EIO95815.1| ribosome-associated GTPase EngA [Escherichia coli EC4196]
 gi|390845669|gb|EIP09297.1| ribosome-associated GTPase EngA [Escherichia coli TW14301]
 gi|390845928|gb|EIP09548.1| ribosome-associated GTPase EngA [Escherichia coli TW14313]
 gi|390850219|gb|EIP13607.1| ribosome-associated GTPase EngA [Escherichia coli EC4421]
 gi|390860941|gb|EIP23223.1| ribosome-associated GTPase EngA [Escherichia coli EC4422]
 gi|390864871|gb|EIP26940.1| ribosome-associated GTPase EngA [Escherichia coli EC4013]
 gi|390870209|gb|EIP31768.1| ribosome-associated GTPase EngA [Escherichia coli EC4402]
 gi|390878231|gb|EIP39106.1| ribosome-associated GTPase EngA [Escherichia coli EC4439]
 gi|390883310|gb|EIP43752.1| ribosome-associated GTPase EngA [Escherichia coli EC4436]
 gi|390892967|gb|EIP52537.1| ribosome-associated GTPase EngA [Escherichia coli EC4437]
 gi|390895487|gb|EIP54952.1| ribosome-associated GTPase EngA [Escherichia coli EC4448]
 gi|390900095|gb|EIP59331.1| ribosome-associated GTPase EngA [Escherichia coli EC1738]
 gi|390907490|gb|EIP66343.1| ribosome-associated GTPase EngA [Escherichia coli EC1734]
 gi|390918705|gb|EIP77094.1| ribosome-associated GTPase EngA [Escherichia coli EC1863]
 gi|391251508|gb|EIQ10723.1| GTPase Der [Shigella flexneri K-1770]
 gi|391304851|gb|EIQ62653.1| GTPase Der [Escherichia coli EPECa12]
 gi|391312024|gb|EIQ69647.1| small GTP-binding domain protein [Escherichia coli EPEC C342-62]
 gi|394383758|gb|EJE61345.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9634]
 gi|394393288|gb|EJE69977.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9602]
 gi|394396705|gb|EJE73037.1| GTP-binding protein EngA [Escherichia coli O26:H11 str. CVM10224]
 gi|394398237|gb|EJE74425.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9553]
 gi|394400235|gb|EJE76171.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9455]
 gi|394413803|gb|EJE87797.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM10021]
 gi|394421290|gb|EJE94766.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM9952]
 gi|394430596|gb|EJF02910.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM10030]
 gi|397785059|gb|EJK95912.1| small GTP-binding domain protein [Escherichia coli STEC_O31]
 gi|404290615|gb|EJZ47522.1| GTPase Der [Escherichia sp. 1_1_43]
 gi|406776659|gb|AFS56083.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2009EL-2050]
 gi|407053228|gb|AFS73279.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2011C-3493]
 gi|407066442|gb|AFS87489.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2009EL-2071]
 gi|408064412|gb|EKG98894.1| ribosome-associated GTPase EngA [Escherichia coli PA7]
 gi|408066321|gb|EKH00780.1| ribosome-associated GTPase EngA [Escherichia coli FRIK920]
 gi|408079120|gb|EKH13248.1| ribosome-associated GTPase EngA [Escherichia coli FDA506]
 gi|408082586|gb|EKH16552.1| ribosome-associated GTPase EngA [Escherichia coli FDA507]
 gi|408090997|gb|EKH24234.1| ribosome-associated GTPase EngA [Escherichia coli FDA504]
 gi|408097389|gb|EKH30288.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1999]
 gi|408108266|gb|EKH40283.1| ribosome-associated GTPase EngA [Escherichia coli NE1487]
 gi|408114668|gb|EKH46194.1| ribosome-associated GTPase EngA [Escherichia coli NE037]
 gi|408120606|gb|EKH51582.1| ribosome-associated GTPase EngA [Escherichia coli FRIK2001]
 gi|408127198|gb|EKH57702.1| ribosome-associated GTPase EngA [Escherichia coli PA4]
 gi|408137506|gb|EKH67207.1| ribosome-associated GTPase EngA [Escherichia coli PA23]
 gi|408139737|gb|EKH69334.1| ribosome-associated GTPase EngA [Escherichia coli PA49]
 gi|408145794|gb|EKH74944.1| ribosome-associated GTPase EngA [Escherichia coli PA45]
 gi|408154827|gb|EKH83157.1| ribosome-associated GTPase EngA [Escherichia coli TT12B]
 gi|408159589|gb|EKH87642.1| ribosome-associated GTPase EngA [Escherichia coli MA6]
 gi|408163438|gb|EKH91304.1| ribosome-associated GTPase EngA [Escherichia coli 5905]
 gi|408173192|gb|EKI00238.1| ribosome-associated GTPase EngA [Escherichia coli CB7326]
 gi|408179701|gb|EKI06355.1| ribosome-associated GTPase EngA [Escherichia coli EC96038]
 gi|408182460|gb|EKI08966.1| ribosome-associated GTPase EngA [Escherichia coli 5412]
 gi|408192938|gb|EKI18497.1| ribosome-associated GTPase EngA [Escherichia coli TW15901]
 gi|408201383|gb|EKI26538.1| ribosome-associated GTPase EngA [Escherichia coli TW00353]
 gi|408217242|gb|EKI41518.1| ribosome-associated GTPase EngA [Escherichia coli PA38]
 gi|408226772|gb|EKI50396.1| ribosome-associated GTPase EngA [Escherichia coli EC1735]
 gi|408237946|gb|EKI60781.1| ribosome-associated GTPase EngA [Escherichia coli EC1736]
 gi|408241897|gb|EKI64502.1| ribosome-associated GTPase EngA [Escherichia coli EC1737]
 gi|408246279|gb|EKI68577.1| ribosome-associated GTPase EngA [Escherichia coli EC1846]
 gi|408255113|gb|EKI76576.1| ribosome-associated GTPase EngA [Escherichia coli EC1847]
 gi|408258544|gb|EKI79804.1| ribosome-associated GTPase EngA [Escherichia coli EC1848]
 gi|408265063|gb|EKI85818.1| ribosome-associated GTPase EngA [Escherichia coli EC1849]
 gi|408273772|gb|EKI93812.1| ribosome-associated GTPase EngA [Escherichia coli EC1850]
 gi|408276714|gb|EKI96598.1| ribosome-associated GTPase EngA [Escherichia coli EC1856]
 gi|408285841|gb|EKJ04824.1| ribosome-associated GTPase EngA [Escherichia coli EC1862]
 gi|408290648|gb|EKJ09352.1| ribosome-associated GTPase EngA [Escherichia coli EC1864]
 gi|408295558|gb|EKJ13863.1| ribosome-associated GTPase EngA [Escherichia coli EC1865]
 gi|408307336|gb|EKJ24677.1| ribosome-associated GTPase EngA [Escherichia coli EC1868]
 gi|408307656|gb|EKJ24985.1| ribosome-associated GTPase EngA [Escherichia coli EC1866]
 gi|408318656|gb|EKJ34859.1| ribosome-associated GTPase EngA [Escherichia coli EC1869]
 gi|408324641|gb|EKJ40567.1| ribosome-associated GTPase EngA [Escherichia coli EC1870]
 gi|408325856|gb|EKJ41701.1| ribosome-associated GTPase EngA [Escherichia coli NE098]
 gi|408336096|gb|EKJ50895.1| ribosome-associated GTPase EngA [Escherichia coli FRIK523]
 gi|408343247|gb|EKJ57651.1| ribosome-associated GTPase EngA [Escherichia coli 0.1288]
 gi|408345971|gb|EKJ60282.1| ribosome-associated GTPase EngA [Escherichia coli 0.1304]
 gi|408460427|gb|EKJ84206.1| ribosome-associated GTPase EngA [Escherichia coli AD30]
 gi|408549140|gb|EKK26502.1| ribosome-associated GTPase EngA [Escherichia coli 3.4870]
 gi|408549248|gb|EKK26609.1| ribosome-associated GTPase EngA [Escherichia coli 5.2239]
 gi|408550420|gb|EKK27749.1| ribosome-associated GTPase EngA [Escherichia coli 6.0172]
 gi|408567700|gb|EKK43754.1| ribosome-associated GTPase EngA [Escherichia coli 8.0566]
 gi|408568503|gb|EKK44534.1| ribosome-associated GTPase EngA [Escherichia coli 8.0569]
 gi|408568604|gb|EKK44633.1| ribosome-associated GTPase EngA [Escherichia coli 8.0586]
 gi|408578461|gb|EKK53979.1| ribosome-associated GTPase EngA [Escherichia coli 10.0833]
 gi|408580906|gb|EKK56279.1| ribosome-associated GTPase EngA [Escherichia coli 8.2524]
 gi|408596059|gb|EKK70251.1| ribosome-associated GTPase EngA [Escherichia coli 88.0221]
 gi|408600693|gb|EKK74526.1| ribosome-associated GTPase EngA [Escherichia coli 8.0416]
 gi|408612234|gb|EKK85579.1| ribosome-associated GTPase EngA [Escherichia coli 10.0821]
 gi|421933096|gb|EKT90890.1| GTP-binding protein EngA [Escherichia coli O26:H11 str.
           CFSAN001629]
 gi|421937588|gb|EKT95197.1| GTP-binding protein EngA [Escherichia coli O111:H11 str.
           CFSAN001630]
 gi|421939051|gb|EKT96582.1| GTP-binding protein EngA [Escherichia coli O111:H8 str.
           CFSAN001632]
 gi|427204355|gb|EKV74632.1| ribosome-associated GTPase EngA [Escherichia coli 88.1042]
 gi|427206408|gb|EKV76621.1| ribosome-associated GTPase EngA [Escherichia coli 89.0511]
 gi|427220495|gb|EKV89415.1| ribosome-associated GTPase EngA [Escherichia coli 90.0091]
 gi|427223920|gb|EKV92645.1| ribosome-associated GTPase EngA [Escherichia coli 90.2281]
 gi|427241480|gb|EKW08911.1| ribosome-associated GTPase EngA [Escherichia coli 93.0056]
 gi|427241980|gb|EKW09399.1| ribosome-associated GTPase EngA [Escherichia coli 93.0055]
 gi|427245639|gb|EKW12920.1| ribosome-associated GTPase EngA [Escherichia coli 94.0618]
 gi|427260554|gb|EKW26537.1| ribosome-associated GTPase EngA [Escherichia coli 95.0183]
 gi|427261059|gb|EKW27009.1| ribosome-associated GTPase EngA [Escherichia coli 95.0943]
 gi|427264271|gb|EKW29961.1| ribosome-associated GTPase EngA [Escherichia coli 95.1288]
 gi|427276125|gb|EKW40704.1| ribosome-associated GTPase EngA [Escherichia coli 96.0428]
 gi|427278854|gb|EKW43309.1| ribosome-associated GTPase EngA [Escherichia coli 96.0427]
 gi|427282986|gb|EKW47224.1| ribosome-associated GTPase EngA [Escherichia coli 96.0939]
 gi|427291466|gb|EKW54868.1| ribosome-associated GTPase EngA [Escherichia coli 96.0932]
 gi|427298916|gb|EKW61906.1| ribosome-associated GTPase EngA [Escherichia coli 96.0107]
 gi|427300124|gb|EKW63076.1| ribosome-associated GTPase EngA [Escherichia coli 97.0003]
 gi|427311959|gb|EKW74129.1| ribosome-associated GTPase EngA [Escherichia coli 97.1742]
 gi|427315037|gb|EKW77052.1| ribosome-associated GTPase EngA [Escherichia coli 97.0007]
 gi|427319316|gb|EKW81138.1| ribosome-associated GTPase EngA [Escherichia coli 99.0672]
 gi|427327384|gb|EKW88773.1| ribosome-associated GTPase EngA [Escherichia coli 99.0678]
 gi|427328844|gb|EKW90195.1| ribosome-associated GTPase EngA [Escherichia coli 99.0713]
 gi|429253328|gb|EKY37818.1| ribosome-associated GTPase EngA [Escherichia coli 96.0109]
 gi|429254899|gb|EKY39256.1| ribosome-associated GTPase EngA [Escherichia coli 97.0010]
 gi|429348252|gb|EKY85022.1| GTPase Der [Escherichia coli O104:H4 str. 11-02092]
 gi|429358998|gb|EKY95664.1| GTPase Der [Escherichia coli O104:H4 str. 11-02030]
 gi|429361329|gb|EKY97984.1| GTPase Der [Escherichia coli O104:H4 str. 11-02093]
 gi|429361636|gb|EKY98289.1| GTPase Der [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429364276|gb|EKZ00896.1| GTPase Der [Escherichia coli O104:H4 str. 11-02318]
 gi|429375125|gb|EKZ11663.1| GTPase Der [Escherichia coli O104:H4 str. 11-02913]
 gi|429376282|gb|EKZ12811.1| GTPase Der [Escherichia coli O104:H4 str. 11-02281]
 gi|429378591|gb|EKZ15099.1| GTPase Der [Escherichia coli O104:H4 str. 11-03439]
 gi|429379455|gb|EKZ15955.1| GTPase Der [Escherichia coli O104:H4 str. 11-03943]
 gi|429391158|gb|EKZ27563.1| GTPase Der [Escherichia coli O104:H4 str. 11-04080]
 gi|429405522|gb|EKZ41788.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429406058|gb|EKZ42319.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429409963|gb|EKZ46188.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429413875|gb|EKZ50055.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429420653|gb|EKZ56778.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429428825|gb|EKZ64900.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429432378|gb|EKZ68418.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429436584|gb|EKZ72600.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429438789|gb|EKZ74782.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429447158|gb|EKZ83082.1| GTPase Der [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429451411|gb|EKZ87302.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429458069|gb|EKZ93907.1| GTPase Der [Escherichia coli O104:H4 str. Ec12-0466]
 gi|430884538|gb|ELC07477.1| GTPase Der [Escherichia coli KTE10]
 gi|430897741|gb|ELC19935.1| GTPase Der [Escherichia coli KTE12]
 gi|430938097|gb|ELC58340.1| GTPase Der [Escherichia coli KTE44]
 gi|430979135|gb|ELC95921.1| GTPase Der [Escherichia coli KTE193]
 gi|431006383|gb|ELD21389.1| GTPase Der [Escherichia coli KTE210]
 gi|431073846|gb|ELD81484.1| GTPase Der [Escherichia coli KTE236]
 gi|431079219|gb|ELD86189.1| GTPase Der [Escherichia coli KTE237]
 gi|431092772|gb|ELD98453.1| GTPase Der [Escherichia coli KTE51]
 gi|431114448|gb|ELE17990.1| GTPase Der [Escherichia coli KTE56]
 gi|431158402|gb|ELE59001.1| GTPase Der [Escherichia coli KTE76]
 gi|431162746|gb|ELE63187.1| GTPase Der [Escherichia coli KTE77]
 gi|431170493|gb|ELE70686.1| GTPase Der [Escherichia coli KTE81]
 gi|431198681|gb|ELE97464.1| GTPase Der [Escherichia coli KTE111]
 gi|431209898|gb|ELF07965.1| GTPase Der [Escherichia coli KTE119]
 gi|431213442|gb|ELF11316.1| GTPase Der [Escherichia coli KTE142]
 gi|431221057|gb|ELF18379.1| GTPase Der [Escherichia coli KTE156]
 gi|431226389|gb|ELF23554.1| GTPase Der [Escherichia coli KTE161]
 gi|431242171|gb|ELF36592.1| GTPase Der [Escherichia coli KTE171]
 gi|431281791|gb|ELF72690.1| GTPase Der [Escherichia coli KTE42]
 gi|431310044|gb|ELF98237.1| GTPase Der [Escherichia coli KTE48]
 gi|431354833|gb|ELG41559.1| GTPase Der [Escherichia coli KTE91]
 gi|431362948|gb|ELG49526.1| GTPase Der [Escherichia coli KTE101]
 gi|431363653|gb|ELG50206.1| GTPase Der [Escherichia coli KTE115]
 gi|431374846|gb|ELG60191.1| GTPase Der [Escherichia coli KTE135]
 gi|431384629|gb|ELG68675.1| GTPase Der [Escherichia coli KTE136]
 gi|431410433|gb|ELG93595.1| GTPase Der [Escherichia coli KTE147]
 gi|431419778|gb|ELH02118.1| GTPase Der [Escherichia coli KTE154]
 gi|431452191|gb|ELH32640.1| GTPase Der [Escherichia coli KTE184]
 gi|431458336|gb|ELH38673.1| GTPase Der [Escherichia coli KTE196]
 gi|431466916|gb|ELH46932.1| GTPase Der [Escherichia coli KTE197]
 gi|431470006|gb|ELH49930.1| GTPase Der [Escherichia coli KTE203]
 gi|431549729|gb|ELI23805.1| GTPase Der [Escherichia coli KTE112]
 gi|431555369|gb|ELI29211.1| GTPase Der [Escherichia coli KTE117]
 gi|431563704|gb|ELI36902.1| GTPase Der [Escherichia coli KTE120]
 gi|431609568|gb|ELI78885.1| GTPase Der [Escherichia coli KTE138]
 gi|431645850|gb|ELJ13394.1| GTPase Der [Escherichia coli KTE163]
 gi|431655649|gb|ELJ22680.1| GTPase Der [Escherichia coli KTE166]
 gi|431715068|gb|ELJ79237.1| GTPase Der [Escherichia coli KTE90]
 gi|441607801|emb|CCP95952.1| GTP-binding protein EngA [Escherichia coli O10:K5(L):H4 str. ATCC
           23506]
 gi|441652212|emb|CCQ02274.1| GTP-binding protein EngA [Escherichia coli O5:K4(L):H4 str. ATCC
           23502]
 gi|443423074|gb|AGC87978.1| GTP-binding protein Der [Escherichia coli APEC O78]
 gi|444537773|gb|ELV17682.1| ribosome-associated GTPase EngA [Escherichia coli 99.0814]
 gi|444539334|gb|ELV19100.1| ribosome-associated GTPase EngA [Escherichia coli 09BKT078844]
 gi|444547143|gb|ELV25771.1| ribosome-associated GTPase EngA [Escherichia coli 99.0815]
 gi|444556933|gb|ELV34298.1| ribosome-associated GTPase EngA [Escherichia coli 99.0839]
 gi|444557758|gb|ELV35083.1| ribosome-associated GTPase EngA [Escherichia coli 99.0816]
 gi|444572585|gb|ELV49007.1| ribosome-associated GTPase EngA [Escherichia coli 99.1753]
 gi|444592921|gb|ELV68159.1| ribosome-associated GTPase EngA [Escherichia coli PA11]
 gi|444593192|gb|ELV68423.1| ribosome-associated GTPase EngA [Escherichia coli ATCC 700728]
 gi|444594764|gb|ELV69919.1| ribosome-associated GTPase EngA [Escherichia coli 99.1805]
 gi|444606364|gb|ELV80983.1| ribosome-associated GTPase EngA [Escherichia coli PA13]
 gi|444606769|gb|ELV81375.1| ribosome-associated GTPase EngA [Escherichia coli PA19]
 gi|444615308|gb|ELV89514.1| ribosome-associated GTPase EngA [Escherichia coli PA2]
 gi|444622830|gb|ELV96774.1| ribosome-associated GTPase EngA [Escherichia coli PA47]
 gi|444623674|gb|ELV97591.1| ribosome-associated GTPase EngA [Escherichia coli PA48]
 gi|444629348|gb|ELW03052.1| ribosome-associated GTPase EngA [Escherichia coli PA8]
 gi|444638189|gb|ELW11540.1| ribosome-associated GTPase EngA [Escherichia coli 7.1982]
 gi|444640514|gb|ELW13773.1| ribosome-associated GTPase EngA [Escherichia coli 99.1781]
 gi|444644874|gb|ELW17969.1| ribosome-associated GTPase EngA [Escherichia coli 99.1762]
 gi|444653962|gb|ELW26657.1| ribosome-associated GTPase EngA [Escherichia coli PA35]
 gi|444663950|gb|ELW36154.1| ribosome-associated GTPase EngA [Escherichia coli 95.0083]
 gi|444669401|gb|ELW41384.1| ribosome-associated GTPase EngA [Escherichia coli 99.0670]
 gi|449316968|gb|EMD07064.1| GTP-binding protein EngA [Escherichia coli O08]
 gi|449319211|gb|EMD09266.1| GTP-binding protein EngA [Escherichia coli S17]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|425289649|ref|ZP_18680489.1| ribosome-associated GTPase EngA [Escherichia coli 3006]
 gi|432527273|ref|ZP_19764365.1| GTPase Der [Escherichia coli KTE233]
 gi|408213024|gb|EKI37528.1| ribosome-associated GTPase EngA [Escherichia coli 3006]
 gi|431063093|gb|ELD72350.1| GTPase Der [Escherichia coli KTE233]
          Length = 490

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDLQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|417958218|ref|ZP_12601134.1| ribosomal RNA large subunit methyltransferase N [Neisseria weaveri
           ATCC 51223]
 gi|343967280|gb|EGV35529.1| ribosomal RNA large subunit methyltransferase N [Neisseria weaveri
           ATCC 51223]
          Length = 362

 Score =  403 bits (1036), Expect = e-109,   Method: Composition-based stats.
 Identities = 190/343 (55%), Positives = 244/343 (71%), Gaps = 11/343 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE PFRAKQ+ +WIH+ G SDF +MTDL+ SLR KL+    I  P +M+ QIS DGTRK
Sbjct: 20  MGEKPFRAKQVLRWIHQGGASDFAEMTDLAKSLRSKLEEKAEIAIPELMTSQISSDGTRK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQLW
Sbjct: 80  WLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
                    K + +  + +R I+N+VMMGMGEPL N+ + + AL ++L DH YGLSRR V
Sbjct: 140 WAN------KAMGVTPKNERVISNVVMMGMGEPLANFDNVVTALSIMLDDHGYGLSRRRV 193

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++P +D+L +  PV LAVSLHASN+ +R+++VP++KKYPL+EL+ AC RY+  +
Sbjct: 194 TVSTSGMVPQMDRLKEVMPVALAVSLHASNDEVRDEIVPLNKKYPLRELMAACQRYLVKA 253

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEY ML G+ND   HA ELI L++       CK NLIPFN FPNS    S N  
Sbjct: 254 PRDFITFEYVMLDGVNDKPQHAYELIELVKD----VPCKFNLIPFNPFPNSGYERSSNEN 309

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
           I+IF  IL  +G+ VT+RK RG+DI+AACGQL+G+  D  K++
Sbjct: 310 IRIFRDILQQAGLVVTVRKTRGDDIDAACGQLAGQVQDKTKRQ 352


>gi|30180061|emb|CAD84061.1| hisS; histidine-tRNA synthetase protein [Nitrosomonas europaea ATCC
            19718]
          Length = 410

 Score =  403 bits (1036), Expect = e-109,   Method: Composition-based stats.
 Identities = 197/355 (55%), Positives = 262/355 (73%), Gaps = 7/355 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F+D LNG+NL+LRPEGTAS +R+VIE+NL+Y GP+RL+YSGPMFRHE
Sbjct: 47   GEVTDIVEKEMYTFVDHLNGENLTLRPEGTASCVRAVIEHNLLYAGPQRLYYSGPMFRHE 106

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAELI+MC+RLW+ L + ++ LE++++G+   R  
Sbjct: 107  RPQKGRYRQFHQVGVEALGFAGPDIDAELIVMCARLWRLLGISDVRLEISTLGSTESRSV 166

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            Y   LI+Y++K  D     ED +  L  N LR+LDSKN  +REIL  AP+L D L++DSL
Sbjct: 167  YRARLISYLEKFCDD--LDEDARRRLKTNPLRILDSKNPAMREILAGAPRLFDDLDEDSL 224

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q+IL   +IS++IN +LVRG+DYYNRTVFEW TDKLG+Q +IC GGRYD LI +
Sbjct: 225  AHFEALQRILRNQDISFEINNRLVRGLDYYNRTVFEWVTDKLGAQGTICAGGRYDGLIAQ 284

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFA+GIER++ L+ + N         DIY+VH G+ A   ++ ++E+LR  
Sbjct: 285  IGGKPAPACGFAMGIERILALMGE-NGAVGAHAIPDIYVVHQGEAAAEFSWKVAESLRDD 343

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 1222
            GLKV+L+    N    FK+QMK+A+AS A FAAIIGE+E++   + IK LR   E
Sbjct: 344  GLKVVLHSGGGN----FKAQMKKADASGARFAAIIGEDEVVAGQISIKPLREAAE 394


>gi|227887546|ref|ZP_04005351.1| GTP-binding protein [Escherichia coli 83972]
 gi|300981973|ref|ZP_07175819.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1]
 gi|300998067|ref|ZP_07181927.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1]
 gi|301047143|ref|ZP_07194239.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1]
 gi|422364844|ref|ZP_16445354.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1]
 gi|422377488|ref|ZP_16457727.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1]
 gi|227835896|gb|EEJ46362.1| GTP-binding protein [Escherichia coli 83972]
 gi|300300945|gb|EFJ57330.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1]
 gi|300304046|gb|EFJ58566.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1]
 gi|300408868|gb|EFJ92406.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1]
 gi|315292449|gb|EFU51801.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1]
 gi|324011217|gb|EGB80436.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1]
          Length = 499

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|194432132|ref|ZP_03064421.1| ribosome-associated GTPase EngA [Shigella dysenteriae 1012]
 gi|417673220|ref|ZP_12322675.1| small GTP-binding domain protein [Shigella dysenteriae 155-74]
 gi|420348427|ref|ZP_14849813.1| GTPase Der [Shigella boydii 965-58]
 gi|194419661|gb|EDX35741.1| ribosome-associated GTPase EngA [Shigella dysenteriae 1012]
 gi|332089695|gb|EGI94796.1| small GTP-binding domain protein [Shigella dysenteriae 155-74]
 gi|391268903|gb|EIQ27822.1| GTPase Der [Shigella boydii 965-58]
          Length = 490

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLLRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|163856328|ref|YP_001630626.1| hypothetical protein Bpet2017 [Bordetella petrii DSM 12804]
 gi|205829671|sp|A9IK57.1|RLMN_BORPD RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|163260056|emb|CAP42357.1| conserved hypothetical protein [Bordetella petrii]
          Length = 381

 Score =  403 bits (1035), Expect = e-109,   Method: Composition-based stats.
 Identities = 192/347 (55%), Positives = 253/347 (72%), Gaps = 9/347 (2%)

Query: 531 NIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISF 590
           ++V + G  PFRA+QLQ+WIH+ G   F+ MTDL+   R +L     I+A  + ++Q S 
Sbjct: 19  DLVGQWGGKPFRARQLQRWIHQRGADSFDAMTDLARDFRGQLAQQCRIQALPVNTEQRSS 78

Query: 591 DGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEI 649
           DGTRKW+F V + N IETVFIPE +R TLC+S+Q GCA+NC FCSTG QGF RNLT  EI
Sbjct: 79  DGTRKWLFDVGQGNAIETVFIPEDDRGTLCVSSQAGCAVNCRFCSTGHQGFNRNLTSSEI 138

Query: 650 IGQLWVTEFKLRREKNI-KINSQGK---RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           IGQLW  +  L  +    ++   G    R ++N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 139 IGQLWWAKRVLEADAGTARLGGAGNDDTRVVSNVVMMGMGEPLLNYDQLLPALRLMLDDN 198

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSG++PM+D+L+++CPV LAVSLHA  + LR++LVP++KKYPL EL+ 
Sbjct: 199 AYGLSRRRVTVSTSGVVPMMDRLSRDCPVALAVSLHAPTDALRDELVPLNKKYPLAELLA 258

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+  +PR  ITFEYCML GINDTD HA  LI + R+ +    CK+NLIPFN FP S
Sbjct: 259 ACERYLASAPRDFITFEYCMLDGINDTDQHARALIQVARQVR----CKLNLIPFNPFPAS 314

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+K+FA+ LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 315 GLKRSPSARVKVFAQRLMDAGIVTTVRKTRGDDIDAACGQLAGEVRD 361


>gi|417713564|ref|ZP_12362529.1| small GTP-binding domain protein [Shigella flexneri K-272]
 gi|417718403|ref|ZP_12367300.1| small GTP-binding domain protein [Shigella flexneri K-227]
 gi|333002306|gb|EGK21870.1| small GTP-binding domain protein [Shigella flexneri K-272]
 gi|333016129|gb|EGK35461.1| small GTP-binding domain protein [Shigella flexneri K-227]
          Length = 490

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|417624466|ref|ZP_12274765.1| small GTP-binding domain protein [Escherichia coli STEC_H.1.8]
 gi|345377427|gb|EGX09359.1| small GTP-binding domain protein [Escherichia coli STEC_H.1.8]
          Length = 490

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 297/454 (65%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  + ++
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVDEYA 176

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 177 -EYWEQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|117624740|ref|YP_853653.1| GTP-binding protein EngA [Escherichia coli APEC O1]
 gi|237705021|ref|ZP_04535502.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA]
 gi|91073411|gb|ABE08292.1| probable GTP-binding protein EngA [Escherichia coli UTI89]
 gi|115513864|gb|ABJ01939.1| putative GTP-binding protein EngA [Escherichia coli APEC O1]
 gi|226901387|gb|EEH87646.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA]
          Length = 503

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 14  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 74  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 132

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 133 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 462


>gi|422358126|ref|ZP_16438787.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3]
 gi|422380260|ref|ZP_16460439.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2]
 gi|315288063|gb|EFU47463.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3]
 gi|324008519|gb|EGB77738.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2]
          Length = 499

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|300898385|ref|ZP_07116728.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1]
 gi|300940238|ref|ZP_07154836.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1]
 gi|300357925|gb|EFJ73795.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1]
 gi|300454934|gb|EFK18427.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1]
          Length = 499

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|343494444|ref|ZP_08732706.1| GTP-binding protein Der [Vibrio nigripulchritudo ATCC 27043]
 gi|342825349|gb|EGU59848.1| GTP-binding protein Der [Vibrio nigripulchritudo ATCC 27043]
          Length = 495

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/455 (43%), Positives = 296/455 (65%), Gaps = 28/455 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAQLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPADEAIAQHLRKIEKPAMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNF-------------------LENILT 160
            + I++ S   DF++LG+ + + I+A +G G+                      LE++  
Sbjct: 120 VDGIDADSACADFWKLGVDDMYQIAAAHGRGVAALIDRALNPFAEEFAAKTEGELEDLTE 179

Query: 161 IELP------YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
            E P      Y +   + EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FEDPEEEKLDYTEEEAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDEREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVLLVIDA 298

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVIAVNKWDGLDTDVKEQVKKELDRRLGFVDFARIHFIS 358

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMAQDDHQPPMVRGRRVKLKYAHAGG 418

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+V+HGN +  + + YKRYL  Y+ R+  ++
Sbjct: 419 YNPPIVVVHGNLVHELPDSYKRYLMNYYRRSLEIM 453


>gi|422780588|ref|ZP_16833373.1| ribosome GTPase EngA [Escherichia coli TW10509]
 gi|323977306|gb|EGB72392.1| ribosome GTPase EngA [Escherichia coli TW10509]
          Length = 490

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDIAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|300820819|ref|ZP_07100969.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7]
 gi|300927126|ref|ZP_07142874.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1]
 gi|300930151|ref|ZP_07145572.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1]
 gi|300951784|ref|ZP_07165599.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1]
 gi|300958859|ref|ZP_07170967.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1]
 gi|301302868|ref|ZP_07208996.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1]
 gi|301330398|ref|ZP_07223040.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1]
 gi|301648266|ref|ZP_07248009.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1]
 gi|309794442|ref|ZP_07688865.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7]
 gi|415862459|ref|ZP_11535925.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1]
 gi|419803534|ref|ZP_14328704.1| ribosome-associated GTPase EngA [Escherichia coli AI27]
 gi|422351893|ref|ZP_16432698.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3]
 gi|300314511|gb|EFJ64295.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1]
 gi|300416896|gb|EFK00207.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1]
 gi|300448981|gb|EFK12601.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1]
 gi|300461957|gb|EFK25450.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1]
 gi|300526572|gb|EFK47641.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7]
 gi|300841803|gb|EFK69563.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1]
 gi|300843627|gb|EFK71387.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1]
 gi|301073653|gb|EFK88459.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1]
 gi|308121898|gb|EFO59160.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7]
 gi|315256531|gb|EFU36499.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1]
 gi|324020071|gb|EGB89290.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3]
 gi|384473446|gb|EIE57487.1| ribosome-associated GTPase EngA [Escherichia coli AI27]
          Length = 499

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|331648208|ref|ZP_08349298.1| ribosome-associated GTPase EngA [Escherichia coli M605]
 gi|386630281|ref|YP_006150001.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i2']
 gi|386635201|ref|YP_006154920.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i14']
 gi|26109281|gb|AAN81483.1|AE016764_165 Probable GTP-binding protein engA [Escherichia coli CFT073]
 gi|331043068|gb|EGI15208.1| ribosome-associated GTPase EngA [Escherichia coli M605]
 gi|355421180|gb|AER85377.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i2']
 gi|355426100|gb|AER90296.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i14']
          Length = 503

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 14  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 74  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 133 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 462


>gi|387507876|ref|YP_006160132.1| GTP-binding protein Der [Escherichia coli O55:H7 str. RM12579]
 gi|419127034|ref|ZP_13671918.1| small GTP-binding domain protein [Escherichia coli DEC5C]
 gi|419132525|ref|ZP_13677362.1| small GTP-binding domain protein [Escherichia coli DEC5D]
 gi|374359870|gb|AEZ41577.1| GTP-binding protein Der [Escherichia coli O55:H7 str. RM12579]
 gi|377974090|gb|EHV37419.1| small GTP-binding domain protein [Escherichia coli DEC5C]
 gi|377975488|gb|EHV38809.1| small GTP-binding domain protein [Escherichia coli DEC5D]
          Length = 490

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLRQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|331643131|ref|ZP_08344266.1| ribosome-associated GTPase EngA [Escherichia coli H736]
 gi|331653939|ref|ZP_08354940.1| ribosome-associated GTPase EngA [Escherichia coli M718]
 gi|331678502|ref|ZP_08379177.1| ribosome-associated GTPase EngA [Escherichia coli H591]
 gi|332278336|ref|ZP_08390749.1| conserved hypothetical protein [Shigella sp. D9]
 gi|418957117|ref|ZP_13509041.1| ribosome-associated GTPase EngA [Escherichia coli J53]
 gi|427805692|ref|ZP_18972759.1| putative GTP-binding factor [Escherichia coli chi7122]
 gi|427810188|ref|ZP_18977253.1| putative GTP-binding factor [Escherichia coli]
 gi|25328223|pir||E91050 probable GTP-binding factor [imported] - Escherichia coli  (strain
           O157:H7, substrain RIMD 0509952)
 gi|25328252|pir||A85895 probable GTP-binding factor Z3774 [imported] - Escherichia coli
           (strain O157:H7, substrain EDL933)
 gi|12516902|gb|AAG57621.1|AE005480_8 putative GTP-binding factor [Escherichia coli O157:H7 str. EDL933]
 gi|13362843|dbj|BAB36796.1| putative GTP-binding factor [Escherichia coli O157:H7 str. Sakai]
 gi|209763418|gb|ACI80021.1| putative GTP-binding factor [Escherichia coli]
 gi|209763420|gb|ACI80022.1| putative GTP-binding factor [Escherichia coli]
 gi|209763422|gb|ACI80023.1| putative GTP-binding factor [Escherichia coli]
 gi|209763426|gb|ACI80025.1| putative GTP-binding factor [Escherichia coli]
 gi|331039929|gb|EGI12149.1| ribosome-associated GTPase EngA [Escherichia coli H736]
 gi|331048788|gb|EGI20864.1| ribosome-associated GTPase EngA [Escherichia coli M718]
 gi|331074962|gb|EGI46282.1| ribosome-associated GTPase EngA [Escherichia coli H591]
 gi|332100688|gb|EGJ04034.1| conserved hypothetical protein [Shigella sp. D9]
 gi|384379764|gb|EIE37631.1| ribosome-associated GTPase EngA [Escherichia coli J53]
 gi|412963874|emb|CCK47800.1| putative GTP-binding factor [Escherichia coli chi7122]
 gi|412970367|emb|CCJ45013.1| putative GTP-binding factor [Escherichia coli]
          Length = 503

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 14  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 74  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 462


>gi|193068430|ref|ZP_03049393.1| ribosome-associated GTPase EngA [Escherichia coli E110019]
 gi|192958382|gb|EDV88822.1| ribosome-associated GTPase EngA [Escherichia coli E110019]
          Length = 490

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|408415653|ref|YP_006626360.1| hypothetical protein BN118_1739 [Bordetella pertussis 18323]
 gi|401777823|emb|CCJ63164.1| conserved hypothetical protein [Bordetella pertussis 18323]
          Length = 382

 Score =  403 bits (1035), Expect = e-109,   Method: Composition-based stats.
 Identities = 192/347 (55%), Positives = 249/347 (71%), Gaps = 10/347 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+W+H+ G   F+ MTDL+   R +L     I+A  + ++Q S D
Sbjct: 20  LVGQWGGKPFRARQLQRWVHQRGADSFDAMTDLARDFRAQLARDCVIEALPVNTEQRSSD 79

Query: 592 GTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V + N IETVFIPE +R TLCIS+Q GC +NC FCSTG QGF RNL   EII
Sbjct: 80  GTRKWLFDVGQGNAIETVFIPEDDRGTLCISSQAGCVVNCRFCSTGHQGFNRNLRASEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGK-----RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           GQLW  +  L    +      GK     R I+N+VMMGMGEPLLNY   + AL+L+L D+
Sbjct: 140 GQLWWAKRVLEAAADTARLPGGKAGEDTRVISNVVMMGMGEPLLNYDQVLPALRLMLDDN 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AY LSRR V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR++LVP++KKYPL  L+ 
Sbjct: 200 AYSLSRRRVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDALRDELVPLNKKYPLNALLA 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+ ++PR  ITFEYCML GINDTD HA ELI L R+ +    CK+NLIPFN FP S
Sbjct: 260 ACERYLAHAPRDFITFEYCMLDGINDTDQHARELIQLARQVR----CKLNLIPFNPFPAS 315

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            L  S ++R+++F + LM++GI  T+RK RG+DI+AACGQL+GE  D
Sbjct: 316 GLKRSPSARVRVFVQRLMDAGIVTTVRKTRGDDIDAACGQLAGEVRD 362


>gi|320157270|ref|YP_004189649.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O]
 gi|319932582|gb|ADV87446.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O]
          Length = 496

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/461 (43%), Positives = 296/461 (64%), Gaps = 39/461 (8%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +  +LV+NK
Sbjct: 61  DGS-EEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            + I++ + S DF++LG+   + I+A +G G+   +E  L        FF          
Sbjct: 120 VDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERAL------DPFFDNLLSANSEG 173

Query: 172 --KEFTNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRV 208
             ++ TN+   E                      IK+AI+G+PNVGKSTL N +LGE RV
Sbjct: 174 EIEDLTNMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERV 233

Query: 209 ITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVV 268
           + YD PGTTRDSI    E + ++Y+LIDTAG+RRR K  E +EKFSV+KTLK++ +ANVV
Sbjct: 234 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVV 293

Query: 269 ILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFA 328
           +L++DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA
Sbjct: 294 LLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFA 353

Query: 329 MFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLR 388
             +FISA+    +    ES+   Y S+   + TS +TR +  A ++H P   +  R KL+
Sbjct: 354 RIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLK 413

Query: 389 YAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           YAH GG NPPI+VIHGN+++ + + YKRYL  YF ++  ++
Sbjct: 414 YAHAGGYNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIM 454


>gi|220935213|ref|YP_002514112.1| GTP-binding protein EngA [Thioalkalivibrio sulfidophilus HL-EbGr7]
 gi|254783176|sp|B8GTN1.1|DER_THISH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|219996523|gb|ACL73125.1| GTP-binding protein EngA [Thioalkalivibrio sulfidophilus HL-EbGr7]
          Length = 464

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/430 (45%), Positives = 288/430 (66%), Gaps = 7/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT SRDALVA++PGLTRDR YG G +G   ++++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNQLTRSRDALVADFPGLTRDRQYGPGRVGGFPYMVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E +  + + M +QT+QAI ESD+++F+VDGR+GL   D+ I   LR  G+ ++LV+NK
Sbjct: 61  SGEAET-LDNLMARQTQQAIDESDVVLFLVDGREGLTAADQAIARSLRTQGKKVLLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +++  ++ +F+ LG G P  I+A +G G+   +  +  + LP  +  + +       
Sbjct: 120 TDGVDADQAMAEFHALGFGAPIPIAATHGRGVLGLMNAVHAL-LPEVEEIQAEA----ER 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++A VG+PN GKSTLIN +LGE RV+  + PGTTRDSI   FE + ++Y LIDTAG
Sbjct: 175 WPGIRIAFVGRPNAGKSTLINRILGEERVVATEIPGTTRDSIFIPFERDGQQYTLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR++  E IEKFSV+KTL++I  A+VV+++LDA++ IS QD ++   + ++GR+L+V 
Sbjct: 235 VRRRSRVHEAIEKFSVVKTLQAIDAAHVVVMVLDAREGISEQDAHLLGVVLDAGRALVVA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  +QR  I++ +  KL FL FA   FISA+    +      +   YDS+ I +
Sbjct: 295 INKWDGLDPDQRDRIRHELDLKLPFLDFAEKRFISALHGTGVGDLFAHVKRAYDSAFIKV 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ +T+ L SA+  H P      R KLRYAHQGG+NPPIIVIHGN  + +   YKRYL 
Sbjct: 355 STNHLTKLLESAMVAHQPPLVSGRRVKLRYAHQGGQNPPIIVIHGNMTERLPGSYKRYLS 414

Query: 420 KYFYRTFSLI 429
            +F +   L+
Sbjct: 415 NHFRQHLKLV 424


>gi|32455227|gb|AAP83329.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Enteritidis]
          Length = 490

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/450 (44%), Positives = 295/450 (65%), Gaps = 22/450 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   +    P ++  +  E+ 
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEEVDEDAEYW 179

Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
               +E                 IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 180 AQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 239

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 299

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA+  +
Sbjct: 300 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 359

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            + +  ES+   YDSS   +ST+ +TR +  A+++H P   +  R KL+YAH GG NPP 
Sbjct: 360 GVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPT 419

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 420 VVIHGNQVKDLPDSYKRYLMDYFRKSLEVM 449


>gi|300817719|ref|ZP_07097934.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1]
 gi|300529707|gb|EFK50769.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1]
          Length = 499

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 294/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA 
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAH 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|254449216|ref|ZP_05062665.1| GTP-binding protein EngA [gamma proteobacterium HTCC5015]
 gi|198261193|gb|EDY85489.1| GTP-binding protein EngA [gamma proteobacterium HTCC5015]
          Length = 472

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/430 (45%), Positives = 287/430 (66%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ +VGRPNVGKSTLFN LT +RDALVA+ PGLTRDR YG G +G ++++++DTGG 
Sbjct: 1   MKPVIAIVGRPNVGKSTLFNCLTRTRDALVADMPGLTRDRKYGNGKLGDRAYVVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + +  + + M  Q +QA+ E+DI++F+VD R+G+   D+ I   +RK G+P+ LV NK
Sbjct: 61  STD-QDEMDNLMASQAQQAMDEADILLFMVDSREGINPIDENIAREIRKKGKPVFLVANK 119

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
            +  +   I  DFY+LG+G P  I+A +  G+ + +E +  T+   + +    KE  +  
Sbjct: 120 MDGCDPDVIRADFYQLGLGEPLTIAASHNRGVHSLIETLFETLPDHFDEEIPDKEHDD-- 177

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++A+VG+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   FE    +Y LIDTA
Sbjct: 178 ---SVRIAVVGRPNVGKSTLINRILGETRVLAYDAPGTTRDSIFVPFESELGRYTLIDTA 234

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+R+R K  E +EKFSV+K L++I EA+VV+ ++DA++ ++ QD+ +   +   G +L+ 
Sbjct: 235 GVRKRGKIHETVEKFSVVKALQAIAEAHVVLQVIDARRGVAEQDLTLLREVLHQGSALVF 294

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +   +R  IK ++ ++LNF+SF  F+FISA+    +   +E++N  YDS++I 
Sbjct: 295 VINKWDGLSPEERDFIKEDLSRRLNFISFPEFHFISALHGTGVGHILEAVNRAYDSAMIK 354

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           L T ++T  L  A   H P      R KLRYAHQGGKNPP IV+HGNR++++ N YKRYL
Sbjct: 355 LGTKQLTDVLEEATVAHQPPLVGRYRTKLRYAHQGGKNPPRIVVHGNRVEHLSNSYKRYL 414

Query: 419 EKYFYRTFSL 428
             +F +   L
Sbjct: 415 NNHFMKRLKL 424


>gi|161486654|ref|NP_933563.2| GTP-binding protein EngA [Vibrio vulnificus YJ016]
 gi|41016999|sp|Q7MNE7.2|DER_VIBVY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
          Length = 496

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/455 (43%), Positives = 301/455 (66%), Gaps = 27/455 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +  +LV+NK
Sbjct: 61  DGS-EEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKN--------FLENILTI---------- 161
            + I++ + S DF++LG+   + I+A +G G+          F +N+L+           
Sbjct: 120 VDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDNLLSTNSEGEIEDLT 179

Query: 162 -----ELPYKKFFKKKEFTNIHSIE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
                E   +++ ++    ++  ++   IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 NMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 239

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    E + ++Y+LIDTAG+RRR K  E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 240 GTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDA 299

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +FIS
Sbjct: 300 RENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 359

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+    +    ES+   Y S+   + TS +TR +  A ++H P   +  R KL+YAH GG
Sbjct: 360 ALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAGG 419

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+VIHGN+++ + + YKRYL  YF ++  ++
Sbjct: 420 YNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIM 454


>gi|209763424|gb|ACI80024.1| putative GTP-binding factor [Escherichia coli]
          Length = 503

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 14  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 74  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLRQEVKEQVKETLDFRLGFIDFARVHFISA 368

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 462


>gi|260776629|ref|ZP_05885524.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607852|gb|EEX34117.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450]
          Length = 495

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/455 (43%), Positives = 300/455 (65%), Gaps = 28/455 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I+N LRK  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIEKPSMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-------------TIE---- 162
            + I++ + S DF++LG+ + + I+A +G G+   ++  L              IE    
Sbjct: 120 VDGIDADAASADFWQLGVESMYQIAAAHGRGVGALIDRALNPFAEKMAEEARGEIEDLTD 179

Query: 163 --------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
                   L Y +   + EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FIDEDEEKLDYTEEEAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVVKTLKAVEDANVVLLVIDA 298

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVIAVNKWDGLDMDVKEHVKKELDRRLGFVDFARIHFIS 358

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+    +    ES+   Y S+   + TS +TR +  A ++H P   +  R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATEDHQPPLVRGRRVKLKYAHAGG 418

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+VIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 419 YNPPIVVIHGNQVNELPDSYKRYLMNYYRKSLEIM 453


>gi|325265757|ref|ZP_08132444.1| cfr family radical SAM enzyme [Kingella denitrificans ATCC 33394]
 gi|324982740|gb|EGC18365.1| cfr family radical SAM enzyme [Kingella denitrificans ATCC 33394]
          Length = 364

 Score =  402 bits (1034), Expect = e-109,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 247/344 (71%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G   F++MTDL+ SLR KL+    +  P +M+ Q S DGTR
Sbjct: 19  QMGEKPFRAKQVMRWIHQGGAESFDEMTDLAKSLRAKLQEKAVVGIPVLMAAQESRDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPETERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ NY + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KALGVTPKNERVISNVVMMGMGEPMANYDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L ++ PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC+RY+T 
Sbjct: 193 VTVSTSGMVPQMDRLKEDMPVALAVSLHASNDKVRDEIVPLNKKYPLKELMAACNRYLTK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA EL+ L++     T CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGVNDKPEHAHELVQLVKD----TPCKFNLIPFNPFPNSGYERSSNK 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I IF +ILM +G+  T+RK RG+DI+AACGQL+G+  D  K++
Sbjct: 309 NINIFKEILMEAGLVTTVRKTRGDDIDAACGQLAGQVQDKTKRQ 352


>gi|293410925|ref|ZP_06654501.1| ribosome-associated GTPase EngA [Escherichia coli B354]
 gi|291471393|gb|EFF13877.1| ribosome-associated GTPase EngA [Escherichia coli B354]
          Length = 499

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTENGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|87118473|ref|ZP_01074372.1| GTPase EngA [Marinomonas sp. MED121]
 gi|86166107|gb|EAQ67373.1| GTPase EngA [Marinomonas sp. MED121]
          Length = 454

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/430 (45%), Positives = 297/430 (69%), Gaps = 7/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT SRDALVA+YPGLTRDR YG+G IG+  FI+IDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGRIGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI  +M +Q+  AI E+D ++F+VDGR GL   D++I N LR+S +P  +V+NK
Sbjct: 61  SGD-EMGIDEKMARQSLLAIEEADTVLFLVDGRHGLNPADEMIANHLRRSNKPTFMVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-KEFTNIH 178
           ++ IN  ++L DFY +G+G+ H I+A +G G+   ++  +   LP+ +  ++ K   +I 
Sbjct: 120 TDGINEDVALADFYSIGLGDLHPIAASHGKGVHKLIDICM---LPFAEQVQEAKGQIDIE 176

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           S +  ++ ++G+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+   +  N K+Y LIDTA
Sbjct: 177 S-KGTRIGVIGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYIRNEKEYTLIDTA 235

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR    E +EKFS++KTLK+I +ANVVI+++D  +++  QD+++  ++ ++GR L++
Sbjct: 236 GVRRRKHIKEAVEKFSIVKTLKAIQDANVVIVVIDGHEDLVEQDLHMIGYVIDAGRGLVI 295

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +    ++ IK  ++++L F+ +A  ++ISA+    + +  ++I+  Y+S    
Sbjct: 296 AVNKWDGLDQYSKERIKTEVERRLGFVPYAKVHYISALHGTAVGNLYDTIDETYESCYAK 355

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
            ST+R+TR +   I  H P   +  R KLRYAHQGG NPP IVIHGN++  +   YK+YL
Sbjct: 356 WSTNRLTRIMEDIISEHQPPLVRGRRIKLRYAHQGGSNPPRIVIHGNQVDALPGSYKKYL 415

Query: 419 EKYFYRTFSL 428
           E  F +  ++
Sbjct: 416 ENKFRQVLNI 425


>gi|432750960|ref|ZP_19985562.1| GTPase Der [Escherichia coli KTE29]
 gi|431295978|gb|ELF85708.1| GTPase Der [Escherichia coli KTE29]
          Length = 490

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDSVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|422333543|ref|ZP_16414553.1| GTPase Der [Escherichia coli 4_1_47FAA]
 gi|373245514|gb|EHP64982.1| GTPase Der [Escherichia coli 4_1_47FAA]
          Length = 490

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMKMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|37197696|dbj|BAC93534.1| predicted GTP-binding protein [Vibrio vulnificus YJ016]
          Length = 511

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/461 (43%), Positives = 296/461 (64%), Gaps = 39/461 (8%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 16  MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 75

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +  +LV+NK
Sbjct: 76  DGS-EEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNK 134

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            + I++ + S DF++LG+   + I+A +G G+   +E  L        FF          
Sbjct: 135 VDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERAL------DPFFDNLLSTNSEG 188

Query: 172 --KEFTNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRV 208
             ++ TN+   E                      IK+AI+G+PNVGKSTL N +LGE RV
Sbjct: 189 EIEDLTNMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERV 248

Query: 209 ITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVV 268
           + YD PGTTRDSI    E + ++Y+LIDTAG+RRR K  E +EKFSV+KTLK++ +ANVV
Sbjct: 249 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVV 308

Query: 269 ILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFA 328
           +L++DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA
Sbjct: 309 LLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFA 368

Query: 329 MFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLR 388
             +FISA+    +    ES+   Y S+   + TS +TR +  A ++H P   +  R KL+
Sbjct: 369 RIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLK 428

Query: 389 YAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           YAH GG NPPI+VIHGN+++ + + YKRYL  YF ++  ++
Sbjct: 429 YAHAGGYNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIM 469


>gi|419346158|ref|ZP_13887532.1| small GTP-binding domain protein [Escherichia coli DEC13A]
 gi|419350618|ref|ZP_13891955.1| small GTP-binding domain protein [Escherichia coli DEC13B]
 gi|419356041|ref|ZP_13897298.1| small GTP-binding domain protein [Escherichia coli DEC13C]
 gi|419361135|ref|ZP_13902352.1| small GTP-binding domain protein [Escherichia coli DEC13D]
 gi|378185606|gb|EHX46231.1| small GTP-binding domain protein [Escherichia coli DEC13A]
 gi|378199879|gb|EHX60338.1| small GTP-binding domain protein [Escherichia coli DEC13B]
 gi|378200303|gb|EHX60759.1| small GTP-binding domain protein [Escherichia coli DEC13C]
 gi|378202782|gb|EHX63209.1| small GTP-binding domain protein [Escherichia coli DEC13D]
          Length = 490

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKEMLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|345872012|ref|ZP_08823952.1| GTP-binding protein engA [Thiorhodococcus drewsii AZ1]
 gi|343919546|gb|EGV30292.1| GTP-binding protein engA [Thiorhodococcus drewsii AZ1]
          Length = 463

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/430 (46%), Positives = 292/430 (67%), Gaps = 9/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ L+GRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G +G   +II+DTGG 
Sbjct: 1   MLPVITLIGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGIGRVGPGPYIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                +G+   M +Q ++AI E+D ++F+VD + G   +D  I   LR+ G+PI LV+NK
Sbjct: 61  G-TAAEGVEALMERQVQRAIEEADHLLFLVDAKDGATPEDIEIVQRLRRLGKPIALVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           S+  + ++++ DF+ LG+G+P  ISA  G G+   +E++   +LP        E  +   
Sbjct: 120 SDTTDPNLAVADFHGLGLGDPWAISASQGLGVNKLIEHVFG-QLP----IDTDETAD--D 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I+VA+VG+PN GKST+IN LLGE R++T+D+PGTTRDSI   FE   ++Y LIDTAG
Sbjct: 173 DQGIRVALVGRPNAGKSTMINRLLGEERLVTFDSPGTTRDSIFIPFERLGRRYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  + IEKFSVIKTL++I E+NVVIL++DA + +  QD  +A  I ESGR+L+V 
Sbjct: 233 LRRRARVQDAIEKFSVIKTLQAIEESNVVILVIDAHEGVGEQDATLAGHIIESGRALVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  ++R+ ++    +KL FL FA  + +SA+  + +   ++ ++  Y ++  +L
Sbjct: 293 INKWDGLQPDEREHVREQFSRKLAFLDFAKLHLVSALHGSGVGLLLDEVDKAYANATRNL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T  +TR L SA++ H P   +  R KLRYAHQGG+NPPIIVIHGN+ + +   Y+RYL 
Sbjct: 353 ATPELTRLLESAVQEHQPPLVRGRRIKLRYAHQGGRNPPIIVIHGNQTEDVPETYRRYLI 412

Query: 420 KYFYRTFSLI 429
             F +  +L+
Sbjct: 413 NRFRKALNLL 422


>gi|343503632|ref|ZP_08741442.1| GTP-binding protein EngA [Vibrio ichthyoenteri ATCC 700023]
 gi|342814424|gb|EGU49368.1| GTP-binding protein EngA [Vibrio ichthyoenteri ATCC 700023]
          Length = 497

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/457 (44%), Positives = 302/457 (66%), Gaps = 30/457 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPADQAIATHLRKIEKPAMLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT---------------IE-- 162
            + I+  + S DF++LG+G+ + I+A +G G+   ++  L                IE  
Sbjct: 120 VDGIDPDAASADFWQLGMGDMYQIAAAHGRGVGQLIDLALNPFAEKMIEDSKGEGEIEDL 179

Query: 163 ----------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
                     L Y +   ++EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 TDFIDEDEEKLDYTEEEAEEEFKRLQD-QPIKMAIIGRPNVGKSTLTNRILGEERVVVYD 238

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++Y+LIDTAGIRRR    E +EKFSV+KTLK+I +ANVV+L++
Sbjct: 239 MPGTTRDSIYIPMERDGREYVLIDTAGIRRRKNINETVEKFSVVKTLKAIEDANVVLLVI 298

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   SGRS+++ VNKWD + ++ ++ +K  + ++L F+ FA  +F
Sbjct: 299 DARENISDQDLSLLGFALNSGRSIVLAVNKWDGLNNDVKEQVKKELDRRLGFVDFARIHF 358

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ES+   Y+S+   + TS +TR + +A  +H P   +  R KL+YAH 
Sbjct: 359 ISALHGTGVGHLFESVQEAYNSATTRVGTSVLTRIMKNATDDHQPPMVRGRRVKLKYAHA 418

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPIIVIHGN++K + + YKR+L  Y+ ++  ++
Sbjct: 419 GGYNPPIIVIHGNQVKELPDSYKRFLMNYYRKSLEIM 455


>gi|343509880|ref|ZP_08747142.1| GTP-binding protein EngA [Vibrio scophthalmi LMG 19158]
 gi|343515692|ref|ZP_08752743.1| GTP-binding protein EngA [Vibrio sp. N418]
 gi|342797862|gb|EGU33499.1| GTP-binding protein EngA [Vibrio sp. N418]
 gi|342803677|gb|EGU39027.1| GTP-binding protein EngA [Vibrio scophthalmi LMG 19158]
          Length = 497

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/457 (44%), Positives = 302/457 (66%), Gaps = 30/457 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPADQAIAAHLRKIEKPAMLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT---------------IE-- 162
            + I+  + S DF++LG+G+ + I+A +G G+   ++  L                IE  
Sbjct: 120 VDGIDPDAASADFWQLGMGDMYQIAAAHGRGVGQLIDLALNPFAEKMIEDQKGEGEIEDL 179

Query: 163 ----------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
                     L Y +   ++EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 TDFIDEDEEKLDYTEEEAEEEFKRLQD-QPIKMAIIGRPNVGKSTLTNRILGEERVVVYD 238

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++Y+LIDTAGIRRR    E +EKFSV+KTLK+I +ANVV+L++
Sbjct: 239 MPGTTRDSIYIPMERDGREYVLIDTAGIRRRKNINETVEKFSVVKTLKAIEDANVVLLVI 298

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   SGRS+++ VNKWD + ++ ++ +K  + ++L F+ FA  +F
Sbjct: 299 DARENISDQDLSLLGFALNSGRSIVLAVNKWDGLNNDVKEQVKKELDRRLGFVDFARIHF 358

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ES+   Y+S+   + TS +TR + +A  +H P   +  R KL+YAH 
Sbjct: 359 ISALHGTGVGHLFESVQEAYNSATTRVGTSVLTRIMKNATDDHQPPMVRGRRVKLKYAHA 418

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPIIVIHGN++K + + YKR+L  Y+ ++  ++
Sbjct: 419 GGYNPPIIVIHGNQVKELPDSYKRFLMNYYRKSLEIM 455


>gi|254283197|ref|ZP_04958165.1| GTP-binding protein EngA [gamma proteobacterium NOR51-B]
 gi|219679400|gb|EED35749.1| GTP-binding protein EngA [gamma proteobacterium NOR51-B]
          Length = 472

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/429 (45%), Positives = 285/429 (66%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT +RDALVAN  GLTRDR YG+G +G   +I+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNQLTRTRDALVANLSGLTRDRQYGDGKVGAVPYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI   M  Q++ AI E+DI++ +VDGR G+   D+ + ++LR+  +P  LVINK
Sbjct: 61  SGD-ESGIDAAMAGQSQTAIEEADIVLLMVDGRAGIQAGDEALVSYLRRKSKPFHLVINK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +    +L DFY  GI   H I+A +  GI + ++++L+    Y +  +  E ++   
Sbjct: 120 IDGVGEEAALSDFYGFGIDGMHAIAASHNRGISSMMQSVLS---DYSQGDESLERSD--- 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I+VA +G+PNVGKSTLIN LLG++RV+ +D PGTTRDSI   FE   + Y LIDTAG
Sbjct: 174 -GGIRVAAIGRPNVGKSTLINRLLGDDRVVVFDEPGTTRDSIYIDFERRGQAYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E +EKFS++KTLK+I +A+VVILL+DA + +  QD+++     ++GR L++ 
Sbjct: 233 VRRRKNVRETVEKFSIVKTLKAIADAHVVILLMDAHEGVVEQDLHLLGQCIDAGRGLVIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  ++R  I++ ++++L F+ +A  +FISA+    +    ES+   Y ++I  L
Sbjct: 293 VNKWDGVDPDERDWIRSELQRRLQFVDYADIHFISALHGTGVGHLYESVGRAYSAAIKSL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+TR L  A+  HPP      R KLRYAH GG+NPP+IVIHG + + + + Y RYLE
Sbjct: 353 STNRLTRILEDAVSTHPPPMVNGRRIKLRYAHAGGQNPPLIVIHGTQTEALPSSYSRYLE 412

Query: 420 KYFYRTFSL 428
           K F R   L
Sbjct: 413 KVFRRELEL 421


>gi|329904161|ref|ZP_08273691.1| GTP-binding protein EngA [Oxalobacteraceae bacterium IMCC9480]
 gi|327548117|gb|EGF32835.1| GTP-binding protein EngA [Oxalobacteraceae bacterium IMCC9480]
          Length = 340

 Score =  402 bits (1032), Expect = e-109,   Method: Composition-based stats.
 Identities = 192/343 (55%), Positives = 265/343 (77%), Gaps = 4/343 (1%)

Query: 47  IGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNF 106
           +G++ F++IDTGGFEP  K+GIMHEM KQT+QA+ E+D++IFIVDGRQG+   DK IT+F
Sbjct: 1   MGERPFLVIDTGGFEPVAKEGIMHEMAKQTRQAVAEADMVIFIVDGRQGMTPHDKTITDF 60

Query: 107 LRKSGQPIVLVINKSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY 165
           LRKSG+ ++LV+NK+E +  S+++ DFYELG+G+P++ISA +G+G+ + +E  L + L  
Sbjct: 61  LRKSGRQVMLVVNKAEGMRYSAVTADFYELGMGDPYVISAAHGDGVMDLVEEALNLALAQ 120

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
           K      E   +   + I++AIVG+PNVGKST++N+LLGE RVI +D PGTTRDSI+  F
Sbjct: 121 KPV---DEEVAVDLGKAIRIAIVGRPNVGKSTMVNTLLGEERVIAFDMPGTTRDSIEIPF 177

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E + ++Y LIDTAGIRRR K FE IEKFSV+KTL+SI EANVV+LLLDAQQ+IS QD +I
Sbjct: 178 ERSGQQYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHI 237

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
           A FI ESGR+L+V VNKWD +  ++R  IK ++ +KL+FLSFA F++ISA+K   ++  M
Sbjct: 238 AGFILESGRALVVGVNKWDGLTSSRRDEIKIDLDRKLDFLSFAKFHYISALKATGVDQLM 297

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLR 388
           +SIN  Y +++  LST ++TRALI A+++  P RK  IRPKLR
Sbjct: 298 KSINSAYAAAMSDLSTPKLTRALIEAVEHQQPRRKGSIRPKLR 340



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 20/169 (11%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           + +VGRPNVGKST+ N L      +  + PG TRD          + + +IDT G     
Sbjct: 137 IAIVGRPNVGKSTMVNTLLGEERVIAFDMPGTTRDSIEIPFERSGQQYTLIDTAGIR--- 193

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           ++G + E  +     +T Q+I E+++++ ++D +Q + EQD  I  F+ +SG+ +V+ +N
Sbjct: 194 RRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFILESGRALVVGVN 253

Query: 120 KSENINSS----------ISLDFYELGIGNPHIISALYGNGIKNFLENI 158
           K + + SS            LDF  L     H ISAL   G+   +++I
Sbjct: 254 KWDGLTSSRRDEIKIDLDRKLDF--LSFAKFHYISALKATGVDQLMKSI 300


>gi|91225135|ref|ZP_01260357.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01]
 gi|269965174|ref|ZP_06179308.1| GTP-binding protein [Vibrio alginolyticus 40B]
 gi|91190078|gb|EAS76349.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01]
 gi|269830160|gb|EEZ84387.1| GTP-binding protein [Vibrio alginolyticus 40B]
          Length = 498

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/458 (43%), Positives = 300/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L+                  
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALSPFFDDLLTSESEDGEIED 179

Query: 162 ------ELP----YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                 E P    Y +   + EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTGFEDEEPLVEDYTEEDAEAEFKRLQE-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDSDVKESVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y+S+   + TS +TR +  A+ +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYNSATTRVGTSVLTRIMKMAVDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVIHGNMVRELPDSYKRYLMNYFRKSLEIM 456


>gi|27363891|ref|NP_759419.1| GTP-binding protein Der [Vibrio vulnificus CMCP6]
 gi|31340067|sp|Q8DF02.1|DER_VIBVU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|27360008|gb|AAO08946.1| GTP-binding protein EngA [Vibrio vulnificus CMCP6]
          Length = 496

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/458 (43%), Positives = 299/458 (65%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +  +LV+NK
Sbjct: 61  DGS-EEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
            + I++ + S DF++LG+   + I+A +G G+   +E  L    P+              
Sbjct: 120 VDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALD---PFFDNLLSANNEGEIE 176

Query: 166 ------KKFFKKKEFTNIHSIEY--------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
                  +  +++E++   + E         IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 177 DLTDMEDEDAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVY 236

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR K  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLV 296

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +
Sbjct: 297 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 356

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ES+   Y S+   + TS +TR +  A ++H P   +  R KL+YAH
Sbjct: 357 FISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAH 416

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN+++ + + YKRYL  YF ++  ++
Sbjct: 417 AGGYNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIM 454


>gi|386815061|ref|ZP_10102279.1| GTP-binding protein engA [Thiothrix nivea DSM 5205]
 gi|386419637|gb|EIJ33472.1| GTP-binding protein engA [Thiothrix nivea DSM 5205]
          Length = 473

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/430 (47%), Positives = 284/430 (66%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPVL L+GRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G    + +++IDTGG 
Sbjct: 1   MKPVLALIGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGTGDHHGRGYMLIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E + GI   M KQT+ AI ES  I+F+VDGRQGL   D+ I   +R++G+P+ L++NK
Sbjct: 61  SGE-ETGIDEYMAKQTRAAIAESSAILFLVDGRQGLTAADEQIARDIRQTGKPVFLLVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++   S +FY LG     +I+A  G G+ + +++IL          + ++      
Sbjct: 120 IDGVDADQASAEFYALGFTEVFMIAASQGRGVTSMIDDILD-----HLGAEFEDEEEQED 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+A +G+PNVGKSTLIN +LGE RVI +D PGTTRDSI   FE +  +Y LIDTAG
Sbjct: 175 DGSIKIAFIGRPNVGKSTLINRILGEERVIAFDQPGTTRDSIFIPFERDGLRYTLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E IEKFS+IKTL +I  A+VV++L+DA   I+ QD ++     E+GR+LI+ 
Sbjct: 235 VRRRRSVDEAIEKFSIIKTLDAIQRAHVVVMLVDAHDAITDQDAHLLGLALEAGRALIIA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNF-LSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
           VNKWD +  ++R  IK  ++ KL F L FA   FISA+  +N+     ++   YDS+++ 
Sbjct: 295 VNKWDGLESDERDWIKQQLEVKLPFVLDFAEVFFISALHGSNVGLLYAAVKRAYDSAMLK 354

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           ++TSR+TR L  A++ H P   +  R KLRYAHQGG NP  ++IHGNR +Y+ + Y RYL
Sbjct: 355 VATSRLTRILEMAVQQHQPPLTRGQRIKLRYAHQGGSNPFRLIIHGNRTEYVPDSYTRYL 414

Query: 419 EKYFYRTFSL 428
             YF +T  L
Sbjct: 415 TNYFRQTLKL 424


>gi|331673966|ref|ZP_08374729.1| ribosome-associated GTPase EngA [Escherichia coli TA280]
 gi|331069239|gb|EGI40631.1| ribosome-associated GTPase EngA [Escherichia coli TA280]
          Length = 503

 Score =  402 bits (1032), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 294/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 14  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 74  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD++   FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 309 EGISDQDLSQLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 462


>gi|254228662|ref|ZP_04922086.1| GTP-binding protein EngA [Vibrio sp. Ex25]
 gi|262395114|ref|YP_003286968.1| GTP-binding protein EngA [Vibrio sp. Ex25]
 gi|451970701|ref|ZP_21923926.1| GTP-binding protein EngA [Vibrio alginolyticus E0666]
 gi|151938841|gb|EDN57675.1| GTP-binding protein EngA [Vibrio sp. Ex25]
 gi|262338708|gb|ACY52503.1| GTP-binding protein EngA [Vibrio sp. Ex25]
 gi|451933429|gb|EMD81098.1| GTP-binding protein EngA [Vibrio alginolyticus E0666]
          Length = 498

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/458 (43%), Positives = 299/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDAAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L+                  
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALSPFFDDLLTSESEEGEIED 179

Query: 162 ------ELP----YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                 E P    Y +   + EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTGFEDEEPLVEDYTEEDAEAEFKRLQE-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDSDVKESVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y+S+   + TS +TR +  A+ +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYNSATTRVGTSVLTRIMKMAVDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVIHGNMVRELPDSYKRYLMNYFRKSLEIM 456


>gi|420381495|ref|ZP_14880942.1| GTPase Der [Shigella dysenteriae 225-75]
 gi|391299814|gb|EIQ57753.1| GTPase Der [Shigella dysenteriae 225-75]
          Length = 490

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS Q++++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQELSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|253996236|ref|YP_003048300.1| radical SAM enzyme, Cfr family [Methylotenera mobilis JLW8]
 gi|253982915|gb|ACT47773.1| radical SAM enzyme, Cfr family [Methylotenera mobilis JLW8]
          Length = 367

 Score =  401 bits (1031), Expect = e-108,   Method: Composition-based stats.
 Identities = 188/341 (55%), Positives = 246/341 (72%), Gaps = 5/341 (1%)

Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
           GE PFRAKQL +W+H FGV DF +MTD++ +LR+KL     I  P +   Q+S DGTRKW
Sbjct: 20  GEKPFRAKQLMRWMHHFGVHDFEQMTDIAKNLREKLAVDAEITLPTVQLAQVSNDGTRKW 79

Query: 597 IFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
           +      N IETVFIPE +R TLC+S+QVGCA+ C FCSTGRQGF RNL+V EIIGQ+ +
Sbjct: 80  LIGTDTANSIETVFIPEDDRGTLCVSSQVGCALECTFCSTGRQGFNRNLSVAEIIGQVAI 139

Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
               LR+E    +     R I+N+VMMGMGEPL NY + + A++++L D AYGLSRR V 
Sbjct: 140 ANQTLRQEPGYDMLPANDRIISNVVMMGMGEPLANYDNVVTAMQIMLDDSAYGLSRRRVT 199

Query: 716 LSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSP 775
           LSTSG++P +D+L ++CPV LAVSLHA N+ LR+ +VPI+KKYPLKEL+ AC+RY+  +P
Sbjct: 200 LSTSGMVPAMDRLKEDCPVALAVSLHAPNDALRDVIVPINKKYPLKELMAACNRYLEKAP 259

Query: 776 RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRI 835
           R  +TFEY ML G+NDT  HA +L+ L++      SCK NLIPFN FPNS    SK + +
Sbjct: 260 RDFVTFEYVMLDGVNDTVEHAHQLLELVKN----VSCKFNLIPFNPFPNSGYDTSKPNHV 315

Query: 836 KIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           ++F  ILM +G  VT+RK RG+DI+AACGQL+G+  D  K+
Sbjct: 316 RVFRDILMQAGYVVTVRKTRGDDIDAACGQLAGKVLDKTKR 356


>gi|410618492|ref|ZP_11329437.1| GTP-binding protein [Glaciecola polaris LMG 21857]
 gi|410162034|dbj|GAC33575.1| GTP-binding protein [Glaciecola polaris LMG 21857]
          Length = 482

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/461 (44%), Positives = 294/461 (63%), Gaps = 20/461 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + +KGI   M +Q+  AI E+D+++F+VD R GL   D+ I   LRK  + + +V NK
Sbjct: 61  SGD-EKGIDVAMAQQSLMAIDEADVVLFLVDARAGLTAADQGIAEHLRKQNKSVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + I+  S S DF+ LG+G+   I+A +G G+   L + L   +P  + F   +      
Sbjct: 120 VDGIDGDSESADFFALGLGDVSQIAAAHGRGVTQLLTHTL---MPLSEQFPDMQVPEDEG 176

Query: 180 IEY---------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
           ++                IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDS+   
Sbjct: 177 VDQELDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVFIP 236

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
            E + ++Y+LIDTAG+RRR    E +EKFS++KTL++I EANVV+L++DAQ+ ++ QD++
Sbjct: 237 MERDGREYVLIDTAGVRRRRNISEAVEKFSIVKTLQAIEEANVVLLIIDAQEGVTDQDLS 296

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+  SGRSL+V VNKWD +  + ++ IK  + ++L F+ FA  +FISA+   N+   
Sbjct: 297 LLGFVLNSGRSLVVAVNKWDGLAKDVKEEIKRELDRRLGFIDFARLHFISALHGTNVGHL 356

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            ES+   Y+S+   ++TS +TR +  A  +H P   +  R K++YAH GG NPPIIVIHG
Sbjct: 357 FESVQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHG 416

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIYNRYE 445
           N++K + + YKRY+  YF ++  ++    K    E  N YE
Sbjct: 417 NQVKDLPDSYKRYMMNYFRKSLKVMGTPIKVEFREGANPYE 457


>gi|407938377|ref|YP_006854018.1| radical SAM protein [Acidovorax sp. KKS102]
 gi|407896171|gb|AFU45380.1| radical SAM protein [Acidovorax sp. KKS102]
          Length = 370

 Score =  401 bits (1031), Expect = e-108,   Method: Composition-based stats.
 Identities = 185/338 (54%), Positives = 249/338 (73%), Gaps = 8/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF+ M+DL+ +LR KLK    ++A  ++S+ +S DGT K
Sbjct: 20  LGEKRFRATQLFRWIHQRGASDFDAMSDLAKALRDKLKGCARVEALPVISEHVSSDGTVK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNLT GEI+ QLW
Sbjct: 80  WLFDVGDGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLTTGEIVAQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LR+          +R I+N+VMMGMGEPL NY + + ALK++L DH YGLSRR V
Sbjct: 140 FAEHSLRKRLQTD-----ERVISNVVMMGMGEPLQNYSALVPALKVMLDDHGYGLSRRRV 194

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR+ LVP+++KYP+ EL+ AC+RY+ ++
Sbjct: 195 TVSTSGVVPMMDRLSQDCPVALAVSLHAPNDPLRDNLVPLNRKYPISELLDACNRYLQHA 254

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND   HA +LI L+++  I   CK NLIPFN FP S L+ S +++
Sbjct: 255 PRDFITFEYCMLDGVNDQVEHARQLIELVKRTGI--RCKFNLIPFNPFPASGLLRSPHNQ 312

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           ++ FAK+L ++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 313 VQAFAKMLSDAGIITTVRKTRGDDIDAACGQLAGDVKD 350


>gi|187731692|ref|YP_001881302.1| GTP-binding protein EngA [Shigella boydii CDC 3083-94]
 gi|238691721|sp|B2TXT6.1|DER_SHIB3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|187428684|gb|ACD07958.1| ribosome-associated GTPase EngA [Shigella boydii CDC 3083-94]
          Length = 490

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 294/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 IDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|416268570|ref|ZP_11642199.1| GTP-binding protein EngA [Shigella dysenteriae CDC 74-1112]
 gi|320175074|gb|EFW50187.1| GTP-binding protein EngA [Shigella dysenteriae CDC 74-1112]
          Length = 490

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-EG 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS Q++++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQELSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|422367772|ref|ZP_16448198.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3]
 gi|315300482|gb|EFU59711.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3]
          Length = 499

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 10  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 70  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 129 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTR+SI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRESIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 458


>gi|319763716|ref|YP_004127653.1| radical sam enzyme, cfr family [Alicycliphilus denitrificans BC]
 gi|317118277|gb|ADV00766.1| radical SAM enzyme, Cfr family [Alicycliphilus denitrificans BC]
          Length = 374

 Score =  401 bits (1031), Expect = e-108,   Method: Composition-based stats.
 Identities = 188/340 (55%), Positives = 246/340 (72%), Gaps = 8/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF++M+DL+ SLR+KLK   ++     +S+  S DGT K
Sbjct: 20  LGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLREKLKGCAHVSGLQAISEHASADGTVK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +ETVFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEI+ QLW
Sbjct: 80  WLFDVGGGNAVETVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEIVAQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LR+ +       G+R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR V
Sbjct: 140 HAEHVLRQRR-----GDGERVISNVVMMGMGEPLQNYSALVPALRIMLDDHGYGLSRRRV 194

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+L ++CPV LAVSLHA N+ LR+ LVP+++KYPL+EL+ AC RY+ ++
Sbjct: 195 TVSTSGVVPMMDRLGRDCPVALAVSLHAPNDELRDNLVPLNRKYPLQELLAACRRYLEHA 254

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL--TSCKINLIPFNCFPNSNLICSKN 832
           PR  ITFEYCML G+ND   HA ELI+L+ +       SCK NLIPFN FP S L  S  
Sbjct: 255 PRDFITFEYCMLDGVNDQPEHARELIALVSRKAADGGVSCKFNLIPFNPFPASGLRRSPA 314

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           + +  FAK+L ++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 315 AAVSAFAKLLSDAGIVTTVRKTRGDDIDAACGQLAGDVKD 354


>gi|161986480|ref|YP_311456.2| GTP-binding protein EngA [Shigella sonnei Ss046]
 gi|383179521|ref|YP_005457526.1| GTP-binding protein Der [Shigella sonnei 53G]
 gi|414577232|ref|ZP_11434411.1| GTPase Der [Shigella sonnei 3233-85]
 gi|415844089|ref|ZP_11523893.1| small GTP-binding domain protein [Shigella sonnei 53G]
 gi|418267007|ref|ZP_12886450.1| small GTP-binding domain protein [Shigella sonnei str. Moseley]
 gi|420359711|ref|ZP_14860681.1| GTPase Der [Shigella sonnei 3226-85]
 gi|420363965|ref|ZP_14864848.1| small GTP-binding domain protein [Shigella sonnei 4822-66]
 gi|323169045|gb|EFZ54722.1| small GTP-binding domain protein [Shigella sonnei 53G]
 gi|391281281|gb|EIQ39933.1| GTPase Der [Shigella sonnei 3226-85]
 gi|391283874|gb|EIQ42483.1| GTPase Der [Shigella sonnei 3233-85]
 gi|391293628|gb|EIQ51887.1| small GTP-binding domain protein [Shigella sonnei 4822-66]
 gi|397899124|gb|EJL15500.1| small GTP-binding domain protein [Shigella sonnei str. Moseley]
          Length = 490

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/454 (44%), Positives = 293/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE +L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLERVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I + NVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDTNVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|347820223|ref|ZP_08873657.1| radical SAM enzyme, Cfr family protein [Verminephrobacter
           aporrectodeae subsp. tuberculatae At4]
          Length = 370

 Score =  401 bits (1030), Expect = e-108,   Method: Composition-based stats.
 Identities = 187/339 (55%), Positives = 247/339 (72%), Gaps = 8/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF  M+DL+ +LR KL+    ++A  ++S+Q + DGT 
Sbjct: 19  QLGEQRFRATQLFRWIHQRGASDFGAMSDLAKALRSKLEGCARVEALPLISEQAASDGTL 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V+  N +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNLT GEI+ QL
Sbjct: 79  KWLFDVRDGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLTAGEIVAQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+          +R ITN+VMMGMGEPL NY + I AL+++L DH YGLSRR 
Sbjct: 139 WFAEHSLRKR-----FGTAERVITNLVMMGMGEPLQNYSALIPALRVMLDDHGYGLSRRR 193

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PM+D+LAQ+CPV LAVSLHA N+ LR+KLVP+++KYP+ EL+ AC RY+ +
Sbjct: 194 VTVSTSGVVPMLDRLAQDCPVALAVSLHAPNDPLRDKLVPLNRKYPIHELLQACKRYLVH 253

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND    A ELI L+R  +I   CK NLIPFN FP S L+ S  +
Sbjct: 254 APRDFITFEYCMLDGVNDQLAQARELIDLVRGAEI--RCKFNLIPFNPFPASGLLRSTQN 311

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           ++  FAK+L ++GI  T+R+ RG+DI+AACGQL+G+  D
Sbjct: 312 QLLAFAKVLSDAGIVTTVRRTRGDDIDAACGQLAGDVRD 350


>gi|374623557|ref|ZP_09696064.1| GTP-binding protein EngA [Ectothiorhodospira sp. PHS-1]
 gi|373942665|gb|EHQ53210.1| GTP-binding protein EngA [Ectothiorhodospira sp. PHS-1]
          Length = 466

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/430 (45%), Positives = 287/430 (66%), Gaps = 7/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFN+LT SRDALVA+ PGLTRDR YG G +G   ++++DTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTLFNQLTRSRDALVADLPGLTRDRQYGTGRVGGYGYMVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E    +   M +QT+QAI E+D+++F+VDGR GL   D+ I   LR   +PIVLV+NK
Sbjct: 61  SGESDT-LDTLMAQQTRQAIREADLVMFLVDGRAGLCGADETIAQELRGFNKPIVLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++  +++++F+ LG+G P  I+A +G GI+  + ++ ++ LP +    + E      
Sbjct: 120 TDGVDPQAVTVEFHRLGLGEPRSIAASHGRGIQALMASVRSL-LP-EAMDDEDEGERWPG 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           I   ++A VG+PN GKSTLIN +LGE R++  D PGTTRDS+   FE + + Y LIDTAG
Sbjct: 178 I---RIAFVGRPNAGKSTLINRILGEERMVATDIPGTTRDSVFVPFERDGQVYTLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR++  E +EKFSV+KT+++I  A+VVI LLDA++ I+ QD ++   + ++GR+L+V 
Sbjct: 235 VRRRSRVKETVEKFSVVKTIQAIDAAHVVIFLLDAREGIAEQDAHLLGMVMDAGRALVVA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  +QR  +K ++  KL FL FA   FISA+    +     ++   ++S+   +
Sbjct: 295 INKWDGLTPDQRDRVKTDLLLKLPFLDFAERRFISALHGTGVGDLFGAVQRAHESAFRDM 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            TS +TR L SA+  H P   +  R KLRYAHQGG+NPP+IVIHGN+   +   YKRYL 
Sbjct: 355 GTSVLTRLLESAVVAHQPPLVRGRRIKLRYAHQGGRNPPVIVIHGNQTDALPGAYKRYLT 414

Query: 420 KYFYRTFSLI 429
            +F     L+
Sbjct: 415 NHFREHLQLV 424


>gi|221133872|ref|ZP_03560177.1| GTP-binding protein EngA [Glaciecola sp. HTCC2999]
          Length = 481

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/446 (45%), Positives = 294/446 (65%), Gaps = 22/446 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PVL LVGRPNVGKSTLFNRLTN+RDALVA++PGLTRDR YG+  +  + FI+IDTGG 
Sbjct: 1   MLPVLALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGQAKVEDRQFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI   M +Q+  AI E+D+++F+VD R GL   D+ I  +LRK  + + +V NK
Sbjct: 61  TGD-EAGIDAAMAEQSLLAIDEADVVLFLVDARAGLTAADQGIAEYLRKQEKTVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I+  S S DFY LG+GN   I+A +G G+   L+  L+   P  + F          
Sbjct: 120 VDGIDGDSESADFYALGMGNVQQIAAAHGRGVAQLLDLTLS---PLAENFPDMIAVEPER 176

Query: 170 ------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKS 223
                  +K+   + ++  IK+A+VGKPNVGKSTL N +LGE RV+ YD PGTTRDSI  
Sbjct: 177 NDDDEDAEKQLERLQNLP-IKLAVVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFI 235

Query: 224 LFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDI 283
             E + ++YILIDTAG+R+R K  E +EKFS++KTL++I EANVV+L++DA++ IS QD+
Sbjct: 236 PMERDEREYILIDTAGVRKRRKINEAVEKFSIVKTLQAIEEANVVLLVIDAREGISDQDL 295

Query: 284 NIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINS 343
           ++  FI  +GRSL++ VNKWD +  + +  IK  + ++L F+ FA  +FISA+    +  
Sbjct: 296 SLLGFILNAGRSLVLAVNKWDGLQAHVKDEIKRELDRRLGFVDFARLHFISALHGTGVGH 355

Query: 344 FMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIH 403
             ES+   Y+S+   ++TS +TR +  A ++H P   +  R K++YAH GG NPP++VIH
Sbjct: 356 LFESVQEAYESATRRINTSMLTRIMEMAQEDHNPPLVRSRRVKMKYAHAGGYNPPVVVIH 415

Query: 404 GNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GN++  + + YKRYL  Y+ ++  ++
Sbjct: 416 GNQVDDLPDSYKRYLMNYYRKSLKVM 441


>gi|312884308|ref|ZP_07744017.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368081|gb|EFP95624.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 495

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/457 (43%), Positives = 297/457 (64%), Gaps = 32/457 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I+N LRK  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPADIAISNHLRKLAKPSMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + I++ + S DF++LG+ + + I+A +G G+   ++  L    P+ +    +E   I  
Sbjct: 120 VDGIDADAASADFWQLGVDDMYQIAAAHGRGVGALIDRALN---PFAEEMIAQEQGVIED 176

Query: 180 I---------------------------EYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
           +                           + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 LTDFVDQDEEVLEYTEEEAEQEFQRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 236

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK+I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVVKTLKAIEDANVVLLVI 296

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +F
Sbjct: 297 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDMDVKEHVKKELDRRLGFVDFARLHF 356

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH 
Sbjct: 357 ISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHA 416

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPP++VIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GGYNPPLVVIHGNQVNELPDSYKRYLMNYYRKSLEIM 453


>gi|73856514|gb|AAZ89221.1| putative GTP-binding factor [Shigella sonnei Ss046]
          Length = 503

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/454 (44%), Positives = 293/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 14  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 74  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE +L   LP+ +    +E  +   
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLERVL---LPWMEDLAPQEEVD-ED 188

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I + NVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDTNVVMLVIDAR 308

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG 
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 462


>gi|332284656|ref|YP_004416567.1| hypothetical protein PT7_1403 [Pusillimonas sp. T7-7]
 gi|330428609|gb|AEC19943.1| hypothetical protein PT7_1403 [Pusillimonas sp. T7-7]
          Length = 386

 Score =  400 bits (1029), Expect = e-108,   Method: Composition-based stats.
 Identities = 189/351 (53%), Positives = 252/351 (71%), Gaps = 13/351 (3%)

Query: 531 NIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISF 590
           ++V + G  PFRAKQLQ+W+H+ G   F+ MTDL+   R +L     I AP +  +Q S 
Sbjct: 19  DLVGQWGGKPFRAKQLQRWVHQRGADSFDDMTDLAREFRLQLAEHCSIAAPPVSIEQRSA 78

Query: 591 DGTRKWIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEI 649
           DGTRKW+F V K N +E VFIPE +R TLCIS+Q GC + C FCSTG QGF RNLT  EI
Sbjct: 79  DGTRKWLFDVGKNNAVEAVFIPEDDRGTLCISSQAGCTVACPFCSTGYQGFNRNLTTAEI 138

Query: 650 IGQLW----VTEFKLRREKNIKINSQGK----RQITNIVMMGMGEPLLNYKSTIGALKLI 701
           IGQLW    V +  ++  + +   +Q      R I+N+VMMGMGEPLLNY   +GAL+L+
Sbjct: 139 IGQLWHARRVLQSDMQSARTVSTETQTAPDPARVISNVVMMGMGEPLLNYDQVLGALRLM 198

Query: 702 LSDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLK 761
           L D+AYGLSRR V +STSG++PM+D+L ++CPV LAVSLHA N+ LR+KLVP+++K+PL 
Sbjct: 199 LDDNAYGLSRRRVTVSTSGVVPMMDRLGRDCPVALAVSLHAPNDALRDKLVPLNRKHPLA 258

Query: 762 ELILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNC 821
           EL+ AC+RY+ ++PR  ITFEY ML G+NDTD HA ELI++ ++ +    CK NLIPFN 
Sbjct: 259 ELLAACNRYLEHAPRDFITFEYIMLDGVNDTDQHARELITIAQQVR----CKFNLIPFNP 314

Query: 822 FPNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           FP S L  S  +R+++FA+ LM++GI  T+RK RG+DI AACGQL+G+  D
Sbjct: 315 FPQSGLKRSPAARVRLFAQRLMDAGIVTTVRKTRGDDIAAACGQLAGDVKD 365


>gi|261252182|ref|ZP_05944755.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|417955681|ref|ZP_12598690.1| GTP-binding protein Der [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|260935573|gb|EEX91562.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|342812335|gb|EGU47339.1| GTP-binding protein Der [Vibrio orientalis CIP 102891 = ATCC 33934]
          Length = 495

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/455 (43%), Positives = 301/455 (66%), Gaps = 28/455 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I+N LRK  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIEKPSMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGI-------------------KNFLENILT 160
            + I++ + S DF++LG+ N + I+A +G G+                   K  +E++  
Sbjct: 120 VDGIDADAASADFWQLGVENMYQIAAAHGRGVGALIDRALNPFAEKMAEEAKGEIEDLTE 179

Query: 161 IE------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
            E      L Y +   ++EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FEDLDEEKLDYTEEEAEEEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVVKTLKAVEDANVVLLVIDA 298

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVLAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFIS 358

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPLVRGRRVKLKYAHAGG 418

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+VIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 419 YNPPIVVIHGNQVNELPDSYKRYLMNYYRKSLEIM 453


>gi|161950068|ref|YP_404245.2| GTP-binding protein EngA [Shigella dysenteriae Sd197]
 gi|309784738|ref|ZP_07679371.1| small GTP-binding domain protein [Shigella dysenteriae 1617]
 gi|308927108|gb|EFP72582.1| small GTP-binding domain protein [Shigella dysenteriae 1617]
          Length = 490

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A++++ P   +  R KL+YAH GG 
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDYQPPLVRGRRVKLKYAHAGGY 415

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 449


>gi|91775976|ref|YP_545732.1| hypothetical protein Mfla_1623 [Methylobacillus flagellatus KT]
 gi|123078840|sp|Q1H0U6.1|RLMN_METFK RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|91709963|gb|ABE49891.1| 23S rRNA m(2)A-2503 methyltransferase [Methylobacillus flagellatus
           KT]
          Length = 362

 Score =  400 bits (1029), Expect = e-108,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 247/344 (71%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE PFRAKQ+ +W+H FGVSDF +MTD++ +LR+KL     +  P +  +QIS DGTRK
Sbjct: 20  IGEKPFRAKQMMRWMHHFGVSDFGEMTDIAKALREKLAKEAVVAPPSVHLEQISEDGTRK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE +R TLC+S+QVGCA++C FCSTGRQGF RNL+V EIIGQLW
Sbjct: 80  WLIDVGAGNGVETVFIPEDDRGTLCVSSQVGCALDCTFCSTGRQGFNRNLSVSEIIGQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           V    L R+       +G R I+N+VMMGMGEPL N+ + + A+ ++L D AYGLSRR V
Sbjct: 140 VANKALGRD------PKGDRIISNVVMMGMGEPLANFDNVVAAMNIMLDDSAYGLSRRRV 193

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++P +D+L +ECPV LAVSLHA N+ LR+++VPI++KYP+ +L+ AC RY+  +
Sbjct: 194 TLSTSGMVPAMDRLREECPVALAVSLHAPNDALRDEIVPINRKYPIAQLMAACQRYLEKA 253

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  +TFEY ML G+NDT  HA +L+++++       CK NLIPFN FPNS    SK   
Sbjct: 254 PRDFVTFEYVMLDGVNDTAEHARQLLNIVQD----VPCKFNLIPFNPFPNSGYDTSKPDN 309

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEM 878
           I+ F  ILM +G  VT RK RG DI+AACGQL+G+  D  K+ +
Sbjct: 310 IRRFRDILMQAGYVVTTRKTRGEDIDAACGQLAGKVQDKTKRSL 353


>gi|404379277|ref|ZP_10984342.1| ribosomal RNA large subunit methyltransferase N [Simonsiella
           muelleri ATCC 29453]
 gi|404294703|gb|EJZ50198.1| ribosomal RNA large subunit methyltransferase N [Simonsiella
           muelleri ATCC 29453]
          Length = 364

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/344 (54%), Positives = 247/344 (71%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G  +F++MTDL+ SLR KL ++  +  P +++ Q S DGTR
Sbjct: 20  QMGEKPFRAKQVMRWIHQSGAENFDQMTDLAKSLRAKLNDNAQVGIPALITSQESKDGTR 79

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNL+  EIIGQL
Sbjct: 80  KWLLDVGTGNGVETVFIPETERGTLCISSQVGCALECTFCSTGRQGFNRNLSTAEIIGQL 139

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEPL NY + I AL ++L DH YGLSRR 
Sbjct: 140 WWAN------KALGVTPKNERVISNVVMMGMGEPLANYDNVINALSIMLDDHGYGLSRRR 193

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L ++ PV LAVSLHASN+ +R+K+VP++KKYPLKEL+ AC+RY+  
Sbjct: 194 VTVSTSGMVPQMDRLKEDMPVALAVSLHASNDQVRDKIVPLNKKYPLKELMAACNRYLMK 253

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA EL+ L++     T CK NLIPFN FPNS    S N 
Sbjct: 254 APRDFITFEYVMLDGINDKPEHAHELVQLVKD----TPCKFNLIPFNPFPNSGYERSSNK 309

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I IF +ILM + +  T+RK RG+DI+AACGQL+G+  D  K++
Sbjct: 310 NINIFKEILMEADLVTTVRKTRGDDIDAACGQLAGQVQDKTKRQ 353


>gi|332305588|ref|YP_004433439.1| ribosome-associated GTPase EngA [Glaciecola sp. 4H-3-7+YE-5]
 gi|410646691|ref|ZP_11357141.1| GTP-binding protein [Glaciecola agarilytica NO2]
 gi|332172917|gb|AEE22171.1| ribosome-associated GTPase EngA [Glaciecola sp. 4H-3-7+YE-5]
 gi|410133863|dbj|GAC05540.1| GTP-binding protein [Glaciecola agarilytica NO2]
          Length = 482

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/458 (44%), Positives = 295/458 (64%), Gaps = 14/458 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M  Q+  AI E+D+++F+VD R GL   D+ I   LRK  + + +V NK
Sbjct: 61  SGD-EQGIDMAMANQSLMAIDEADVVLFLVDARVGLTGADQGIAEHLRKQNKSVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL---TIELPYKKFFKKKEFTN 176
            + I+  S S DF+ LG+G+ + I+A +G G+   L + L     + P  +  +++E T 
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLTHTLMPLAEQFPDMQVPEEEEVTQ 179

Query: 177 IHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
               E          IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI    E 
Sbjct: 180 EQDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFIPMER 239

Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
           + ++Y+LIDTAG+RRR    E +EKFS++KTL++I EANVV+L++DAQ+ I+ QD+++  
Sbjct: 240 DGREYVLIDTAGVRRRRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGITDQDLSLLG 299

Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMES 347
           F+  SGRSL++ VNKWD +  + +  IK  + ++L F+ FA  +FISA+   N+    ES
Sbjct: 300 FVLNSGRSLVLAVNKWDGLDKDVKDEIKRELDRRLGFIDFARLHFISALHGTNVGHLFES 359

Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRL 407
           +   Y+S+   ++TS +TR +  A  +H P   +  R K++YAH GG NPPIIVIHGN++
Sbjct: 360 VQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHGNQV 419

Query: 408 KYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIYNRYE 445
           K + + YKRY+  YF ++  ++    K    E  N YE
Sbjct: 420 KDLPDSYKRYMMNYFRKSLKVMGTPIKVEFREGANPYE 457


>gi|121604771|ref|YP_982100.1| radical SAM protein [Polaromonas naphthalenivorans CJ2]
 gi|205829800|sp|A1VNF1.1|RLMN_POLNA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|120593740|gb|ABM37179.1| 23S rRNA m(2)A-2503 methyltransferase [Polaromonas
           naphthalenivorans CJ2]
          Length = 382

 Score =  400 bits (1029), Expect = e-108,   Method: Composition-based stats.
 Identities = 192/340 (56%), Positives = 249/340 (73%), Gaps = 7/340 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LG+  FRA QL +WIH+ G SDF +MTDL+ SLR+KL  S +I+  +++S   S DGT 
Sbjct: 19  QLGQKRFRATQLFRWIHQKGASDFEQMTDLAKSLREKLAVSAHIQGLNVVSRHESADGTI 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   ++IETVFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEII QL
Sbjct: 79  KWLFDVGAGDVIETVFIPETDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEIISQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+        + +R I+N+VMMGMGEPL NY   + ALK++L+DH YGLSRR 
Sbjct: 139 WFAEHFLRKHL-----GRNERVISNVVMMGMGEPLQNYSQLLPALKVMLNDHGYGLSRRR 193

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+LA++CPV LAVSLHA  + LR+ LVP++KKYP+ EL+ AC RY + 
Sbjct: 194 VTVSTSGVVPMIDRLAKDCPVALAVSLHAPQDALRSNLVPLNKKYPIAELLEACTRYQSA 253

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL-TSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +L++LM+ +     SCK NLIPFN FP S L+ S  
Sbjct: 254 APRDFITFEYCMLDGVNDQPEHARQLVALMKTHAANGLSCKFNLIPFNPFPASGLLRSDM 313

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            ++  FAKILM++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 314 PQVMAFAKILMDAGIITTVRKTRGDDIDAACGQLAGDVQD 353


>gi|81242044|gb|ABB62754.1| putative GTP-binding factor [Shigella dysenteriae Sd197]
          Length = 503

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/454 (44%), Positives = 295/454 (64%), Gaps = 30/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 14  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK
Sbjct: 74  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +   
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188

Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            EY                        IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   YDSS   + TS +TR +  A++++ P   +  R KL+YAH GG 
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDYQPPLVRGRRVKLKYAHAGGY 428

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 462


>gi|343501753|ref|ZP_08739622.1| GTP-binding protein Der [Vibrio tubiashii ATCC 19109]
 gi|418481164|ref|ZP_13050212.1| GTP-binding protein Der [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
 gi|342816878|gb|EGU51770.1| GTP-binding protein Der [Vibrio tubiashii ATCC 19109]
 gi|384571116|gb|EIF01654.1| GTP-binding protein Der [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
          Length = 495

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/455 (43%), Positives = 300/455 (65%), Gaps = 28/455 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I+N LRK  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIEKPSMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-------------TIE---- 162
            + I++ + S DF++LG+ N + I+A +G G+   ++  L              IE    
Sbjct: 120 VDGIDADAASADFWQLGVENMYQIAAAHGRGVGALIDRALNPFAEKMAEEAQGEIEDLTE 179

Query: 163 --------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
                   L Y +   ++EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FVDEEEEKLDYTEEEAEEEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVVKTLKAVEDANVVLLVIDA 298

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVLAVNKWDGLDMDVKEHVKKELDRRLGFVDFARIHFIS 358

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPLVRGRRVKLKYAHAGG 418

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+VIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 419 YNPPIVVIHGNQVNELPDSYKRYLMNYYRKSLEIM 453


>gi|431931237|ref|YP_007244283.1| ribosome-associated GTPase EngA [Thioflavicoccus mobilis 8321]
 gi|431829540|gb|AGA90653.1| ribosome-associated GTPase EngA [Thioflavicoccus mobilis 8321]
          Length = 470

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/430 (46%), Positives = 279/430 (64%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDR YG G +G   ++++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRTRDALVADTPGLTRDRQYGIGRLGPVPYVVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E    +   M  Q ++AI E+D ++F+VD   G V  D  I   LR+ G+ + LV+NK
Sbjct: 61  GGETTD-LAERMAGQVERAIAEADHLLFLVDAHDGCVPGDAEIATRLRRLGKSLTLVVNK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI-H 178
           ++  +  ++  DF+ LG+G+P  I+A+ G G+   +E +LT  L         E  +   
Sbjct: 120 TDQRDPDLATADFHLLGLGDPVPIAAVQGRGVAALMERVLT-GLANDDAVGGAEAADADE 178

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
             E I+VAIVG+PN GKSTLIN LLGE RV+TYD+PGTTRD++   F+  + +Y LIDTA
Sbjct: 179 DPERIQVAIVGRPNAGKSTLINRLLGEERVVTYDSPGTTRDTVFIPFDRLDGRYTLIDTA 238

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR +  + IEKFSVIKTL++I   +VVIL++DA+  I   D  +A  I ESGR+L+V
Sbjct: 239 GVRRRARVQDTIEKFSVIKTLQAIAACHVVILVVDARAGIGEHDATLAGHILESGRALVV 298

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +    R+ +K+++ +KL FL FA ++FISA+  + +    + ++ VY ++   
Sbjct: 299 AVNKWDGLDPQARQAVKDDLGRKLAFLDFAAYHFISALHGSGVGLLFDEVDRVYANATRD 358

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           LST  +TR L +A++ H P      R KLRYAHQGG+NPP+IVIHG +   +   Y+RYL
Sbjct: 359 LSTPELTRLLEAAVQEHQPPLVHGRRIKLRYAHQGGRNPPLIVIHGTQTDAVPASYQRYL 418

Query: 419 EKYFYRTFSL 428
              F R   L
Sbjct: 419 VNRFRRELKL 428


>gi|407790351|ref|ZP_11137446.1| GTP-binding protein Der [Gallaecimonas xiamenensis 3-C-1]
 gi|407204973|gb|EKE74952.1| GTP-binding protein Der [Gallaecimonas xiamenensis 3-C-1]
          Length = 495

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/454 (44%), Positives = 290/454 (63%), Gaps = 26/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTNSRDALVA+YPGLTRDR YG+   G+  FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNSRDALVADYPGLTRDRKYGQARYGEYDFILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           E + +KGI   M KQ+  A+ E+D+++ +VD R GL   D  I   +R+ G+P+ LV NK
Sbjct: 61  EGD-EKGIDAAMAKQSLLAMEEADVVMLLVDARDGLTAADDAIARHIRQLGKPVFLVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL---TIELPYKKFFKKKEFTN 176
            + I++ S   +F+ L +G    I+A +G G+   L+N L     EL   +    +   +
Sbjct: 120 VDGIDADSACAEFWGLSLGEVWQIAAAHGRGVTQLLDNALIPVVAELAQAEDEASEALAD 179

Query: 177 IHSIEYI---------------------KVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
           +   E I                     K+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 VLGQELIDVDAIEDEEEAEAIPYADLPVKIAIVGRPNVGKSTLTNRILGEERVVVYDMPG 239

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDS+    E  +K YILIDTAG+RRR +  + +EKFSV+KTL++I +ANVV+L +DA+
Sbjct: 240 TTRDSVYIPMERGDKHYILIDTAGVRRRGRIDDAVEKFSVVKTLQAIEDANVVLLTMDAR 299

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + +S QD+N+   +  +GR+L++ VNKWD +  + R+ IK  + ++L F+ FA  +FISA
Sbjct: 300 EGLSDQDLNLLGHVLNAGRALVLVVNKWDGLSQDDREEIKRELDRRLGFIDFARLHFISA 359

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES++  + S+   +STS++TR L  A  +H P      R KL+YAH GG 
Sbjct: 360 LHGSGVGNLFESVDEAFASATQRVSTSKLTRILQMAQDDHQPPLVSGRRVKLKYAHAGGY 419

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPP I++HGN+++ + N YKRYL  Y+ +T  +I
Sbjct: 420 NPPRIIVHGNQVEKLPNSYKRYLMNYYRKTLQVI 453


>gi|237654050|ref|YP_002890364.1| radical SAM protein [Thauera sp. MZ1T]
 gi|237625297|gb|ACR01987.1| radical SAM enzyme, Cfr family [Thauera sp. MZ1T]
          Length = 382

 Score =  400 bits (1028), Expect = e-108,   Method: Composition-based stats.
 Identities = 190/351 (54%), Positives = 250/351 (71%), Gaps = 14/351 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRA+Q+ +W+H  G  DF+ MTD++ SLR KLK+   I+ P  + D IS DGTRK
Sbjct: 24  LGEKPFRARQVMRWMHHEGCDDFDAMTDVAKSLRAKLKDLAVIRPPVPVRDSISADGTRK 83

Query: 596 WIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE +R TLC+S+Q GCA++C FCSTG+QGF RNL+  EIIGQLW
Sbjct: 84  WLLDVGNANAVETVFIPETSRGTLCVSSQAGCALDCAFCSTGKQGFNRNLSAAEIIGQLW 143

Query: 655 VTEFKL------RREKNIKINSQGK---RQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           +    L        E    + +  K   R I+N+VMMGMGEPL N+ + + AL+L+L DH
Sbjct: 144 LANKLLGAARADAEEHATDLEAGEKDNGRIISNVVMMGMGEPLANFDNVVTALRLMLDDH 203

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
           AYGLSRR V +STSGI+P +D+L  ECPV LAVSLHASN+ LR++LVPI++KYPL+EL+ 
Sbjct: 204 AYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHASNDALRDRLVPINQKYPLRELMA 263

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNS 825
           AC RY+  +PR  +TFEY ML G+ND+D HA EL++L+R     T CK NLIPFN FP+S
Sbjct: 264 ACQRYLERAPRDFVTFEYVMLEGVNDSDAHARELVALVRD----TPCKFNLIPFNPFPDS 319

Query: 826 NLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
               S   RI+ FA IL+++GI  T RK RG+D++AACGQL+G+  D  ++
Sbjct: 320 GFQRSPAERIRRFAGILIDAGIVTTTRKTRGDDVDAACGQLAGQVQDRTRR 370


>gi|410641935|ref|ZP_11352454.1| GTP-binding protein [Glaciecola chathamensis S18K6]
 gi|410138837|dbj|GAC10641.1| GTP-binding protein [Glaciecola chathamensis S18K6]
          Length = 482

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/458 (44%), Positives = 295/458 (64%), Gaps = 14/458 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M  Q+  AI E+D+++F+VD R GL   D+ I   LRK  + + +V NK
Sbjct: 61  SGD-EQGIDMAMANQSLMAIDEADVVLFLVDARVGLTGADQGIAEHLRKQNKSVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL---TIELPYKKFFKKKEFTN 176
            + I+  S S DF+ LG+G+ + I+A +G G+   L + L     + P  +  +++E T 
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLTHTLMPLAEQFPDMQVPEEEEITQ 179

Query: 177 IHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
               E          IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI    E 
Sbjct: 180 EQDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFIPMER 239

Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
           + ++Y+LIDTAG+RRR    E +EKFS++KTL++I EANVV+L++DAQ+ I+ QD+++  
Sbjct: 240 DGREYVLIDTAGVRRRRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGITDQDLSLLG 299

Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMES 347
           F+  SGRSL++ VNKWD +  + +  IK  + ++L F+ FA  +FISA+   N+    ES
Sbjct: 300 FVLNSGRSLVLAVNKWDGLDKDVKDEIKRELDRRLGFIDFARLHFISALHGTNVGHLFES 359

Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRL 407
           +   Y+S+   ++TS +TR +  A  +H P   +  R K++YAH GG NPPIIVIHGN++
Sbjct: 360 VQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHGNQV 419

Query: 408 KYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIYNRYE 445
           K + + YKRY+  YF ++  ++    K    E  N YE
Sbjct: 420 KDLPDSYKRYMMNYFRKSLKVMGTPIKVEFREGANPYE 457


>gi|393757562|ref|ZP_10346386.1| radical SAM superfamily protein 2 [Alcaligenes faecalis subsp.
           faecalis NCIB 8687]
 gi|393165254|gb|EJC65303.1| radical SAM superfamily protein 2 [Alcaligenes faecalis subsp.
           faecalis NCIB 8687]
          Length = 382

 Score =  400 bits (1028), Expect = e-108,   Method: Composition-based stats.
 Identities = 192/351 (54%), Positives = 247/351 (70%), Gaps = 9/351 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+WIH+    DF +MTDL+   R++L     + AP +  + IS D
Sbjct: 20  LVAQWGGKPFRARQLQRWIHQRQQDDFGQMTDLAREFREQLTAHCLVTAPSMSHEHISAD 79

Query: 592 GTRKWIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V   N +E VFIPE +R TLCIS+Q GC + C FCSTG QGF RNLT  EII
Sbjct: 80  GTRKWLFDVGSNNAVEAVFIPEDDRGTLCISSQAGCTVACPFCSTGYQGFNRNLTTAEII 139

Query: 651 GQLWVTEFKL-RREKNIKINSQGK---RQITNIVMMGMGEPLLNYKSTIGALKLILSDHA 706
           GQLW     L    +  +I    +   R I+N+VMMGMGEPLLNY   +GAL+L+L D+A
Sbjct: 140 GQLWYARRALLSAPETARIGDAAQTSTRVISNVVMMGMGEPLLNYDQVLGALRLMLDDNA 199

Query: 707 YGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILA 766
           YGLSRR V +STSG++PM+D+LAQ+CPV LAVSLHA N+ LR++LVP++KKYPL EL+ A
Sbjct: 200 YGLSRRRVTVSTSGVVPMMDRLAQDCPVALAVSLHAPNDALRDRLVPLNKKYPLAELLDA 259

Query: 767 CHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSN 826
           C+RY+ ++PR  ITFEY ML GINDTD HA EL+ + R    +  CK NLIPFN FP S 
Sbjct: 260 CNRYLEHAPRDFITFEYIMLDGINDTDQHAQELLDIAR----IVRCKFNLIPFNPFPQSG 315

Query: 827 LICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
           L  S  +R+K FA+ LM+ G+  T+RK RG+DI AACGQL+G+  D  + E
Sbjct: 316 LKRSSAARVKQFAQRLMDGGVVTTVRKTRGDDIAAACGQLAGDIRDRTRIE 366


>gi|330824021|ref|YP_004387324.1| ribosomal RNA large subunit methyltransferase N [Alicycliphilus
           denitrificans K601]
 gi|329309393|gb|AEB83808.1| Ribosomal RNA large subunit methyltransferase N [Alicycliphilus
           denitrificans K601]
          Length = 374

 Score =  400 bits (1028), Expect = e-108,   Method: Composition-based stats.
 Identities = 188/340 (55%), Positives = 245/340 (72%), Gaps = 8/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF++M+DL+ SLR+KLK   ++     +S+  S DGT K
Sbjct: 20  LGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLREKLKGCAHVSGLQAISEHASADGTVK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +ETVFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEI+ QLW
Sbjct: 80  WLFDVGGGNAVETVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEIVAQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LR+ +       G+R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR V
Sbjct: 140 HAEHVLRQRR-----GDGERVISNVVMMGMGEPLQNYSALVPALRIMLDDHGYGLSRRRV 194

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+L ++CPV LAVSLHA N+ LR+ LVP+++KYPL+EL+ AC RY+ ++
Sbjct: 195 TVSTSGVVPMMDRLGRDCPVALAVSLHAPNDELRDNLVPLNRKYPLQELLAACRRYLEHA 254

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL--TSCKINLIPFNCFPNSNLICSKN 832
           PR  ITFEYCML G+ND   HA ELI+L+ +       SCK NLIPFN FP S L  S  
Sbjct: 255 PRDFITFEYCMLDGVNDQPEHARELIALVSRKAADGGVSCKFNLIPFNPFPASGLRRSPA 314

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
             +  FAK+L ++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 315 VAVSAFAKLLSDAGIVTTVRKTRGDDIDAACGQLAGDVKD 354


>gi|288941004|ref|YP_003443244.1| ribosome-associated GTPase EngA [Allochromatium vinosum DSM 180]
 gi|288896376|gb|ADC62212.1| ribosome-associated GTPase EngA [Allochromatium vinosum DSM 180]
          Length = 467

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/432 (46%), Positives = 291/432 (67%), Gaps = 9/432 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ L+GRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G IG + ++I+DTGG 
Sbjct: 1   MLPVITLIGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGIGRIGPRPYVIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                +GI   M +Q ++A+ E+D ++F+VD R G   +D  I   LR+ G+PI LV+NK
Sbjct: 61  G-TAAEGIEALMERQVQRAVEEADHLLFMVDTRDGCTPEDIDIAQRLRRLGKPITLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           S+ ++ ++++ DF+ LG+G+P   SA  G G++  ++++    LP      +++  +I  
Sbjct: 120 SDTMDPTLAVTDFHRLGLGDPWAASATQGLGVRGLIDHVFE-HLPESA---EEDAADIEH 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY--NNKKYILIDT 237
            + IKVA+VG+PN GKSTLIN LLGE R +T+D+PGTTRDSI   FE   ++++Y LIDT
Sbjct: 176 -DRIKVAVVGRPNAGKSTLINRLLGEERQVTFDSPGTTRDSIFIPFERPGHDQRYTLIDT 234

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR +  + IEKFSVIKTL++I EANV+IL++DA + I  QD  +A  I ESGR+L+
Sbjct: 235 AGLRRRARVHDPIEKFSVIKTLQAIEEANVIILVIDAHEGIGEQDATLAGHIIESGRALV 294

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +  + R  +++   +KL FL FA  + +SA+  + +   ++ ++  Y ++  
Sbjct: 295 VAINKWDGLDPDARNRVRDQFARKLAFLDFAKLHRVSALYGSGVGHVLDDVDLAYANATR 354

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            LST  +TR L +A+  H P      R KLRYAHQGG+NPPIIVIHGN+   +   YKRY
Sbjct: 355 DLSTPELTRLLEAAVMEHQPPLVHGRRIKLRYAHQGGRNPPIIVIHGNQTDVVPETYKRY 414

Query: 418 LEKYFYRTFSLI 429
           L   F +   L+
Sbjct: 415 LINRFRKELDLL 426


>gi|317049132|ref|YP_004116780.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b]
 gi|316950749|gb|ADU70224.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b]
          Length = 496

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/458 (44%), Positives = 293/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+ + M +Q+  AI E+D+++F+VD R G++  D+ I N LR   +   LV NK
Sbjct: 61  D-GTEEGVENRMAEQSLLAIEEADVVLFLVDARAGVMPADQQIANHLRSRQKATFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   + LDFY LG+G  H I+A +G G+ + LE  L   LP+       E +    
Sbjct: 120 TDGLDPEAAVLDFYALGLGEIHAIAASHGRGVTSLLETAL---LPWMDEVAPLEVSEEDE 176

Query: 180 IEY----------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
            E                             IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NEAYWAALAAEENGEELEEEEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E ++++YILIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDDREYILIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLV 296

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA+  IS QD+++  FI  SGRSL++ VNKWD +    +  +K  +  +L F+ FA  +
Sbjct: 297 IDARAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKDEVKETLDFRLGFIDFARVH 356

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  ES+   YD S   ++TS +TR +  A ++H P   +  R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESVTEAYDCSTKRVNTSMLTRIMNMAAEDHQPPLVRGRRVKLKYAH 416

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++K + + YKRYL  YF R+ +++
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVM 454


>gi|222110300|ref|YP_002552564.1| radical sam enzyme, cfr family [Acidovorax ebreus TPSY]
 gi|221729744|gb|ACM32564.1| radical SAM enzyme, Cfr family [Acidovorax ebreus TPSY]
          Length = 383

 Score =  400 bits (1027), Expect = e-108,   Method: Composition-based stats.
 Identities = 187/340 (55%), Positives = 246/340 (72%), Gaps = 8/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF++M+DL+ SLR+KL+   ++     +S+ +S DGT K
Sbjct: 29  LGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLREKLRGCAHVAGLQAISEHVSADGTVK 88

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +ETVFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEI+ QLW
Sbjct: 89  WLFDVGDGNAVETVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEILAQLW 148

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LR+ +       G+R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR V
Sbjct: 149 YAEHALRQRR-----GDGERVISNVVMMGMGEPLQNYAALVPALRVMLDDHGYGLSRRRV 203

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+LAQ+CPV LAVSLHA N+ LR+ LVP+++KYPL EL+ AC RY+ ++
Sbjct: 204 TVSTSGVVPMMDRLAQDCPVALAVSLHAPNDVLRDNLVPLNRKYPLHELLAACRRYLDHA 263

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL--TSCKINLIPFNCFPNSNLICSKN 832
           PR  ITFEYCML G+ND   HA +LI L+ +       SCK NLIPFN FP S L  S  
Sbjct: 264 PRDFITFEYCMLEGVNDQPEHARQLIDLVGRKAADGGVSCKFNLIPFNPFPASGLRRSPP 323

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           + +  FA++L ++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 324 AAVTAFAQLLSDAGIVTTVRKTRGDDIDAACGQLAGDVKD 363


>gi|121593579|ref|YP_985475.1| radical SAM protein [Acidovorax sp. JS42]
 gi|205829704|sp|A1W574.1|RLMN_ACISJ RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|120605659|gb|ABM41399.1| 23S rRNA m(2)A-2503 methyltransferase [Acidovorax sp. JS42]
          Length = 374

 Score =  400 bits (1027), Expect = e-108,   Method: Composition-based stats.
 Identities = 187/340 (55%), Positives = 246/340 (72%), Gaps = 8/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF++M+DL+ SLR+KL+   ++     +S+ +S DGT K
Sbjct: 20  LGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLREKLRGCAHVAGLQAISEHVSADGTVK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +ETVFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEI+ QLW
Sbjct: 80  WLFDVGDGNAVETVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEILAQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LR+ +       G+R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR V
Sbjct: 140 YAEHALRQRR-----GDGERVISNVVMMGMGEPLQNYAALVPALRVMLDDHGYGLSRRRV 194

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+LAQ+CPV LAVSLHA N+ LR+ LVP+++KYPL EL+ AC RY+ ++
Sbjct: 195 TVSTSGVVPMMDRLAQDCPVALAVSLHAPNDVLRDNLVPLNRKYPLHELLAACRRYLDHA 254

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL--TSCKINLIPFNCFPNSNLICSKN 832
           PR  ITFEYCML G+ND   HA +LI L+ +       SCK NLIPFN FP S L  S  
Sbjct: 255 PRDFITFEYCMLEGVNDQPEHARQLIDLVGRKAADGGVSCKFNLIPFNPFPASGLRRSPP 314

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           + +  FA++L ++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 315 AAVTAFAQLLSDAGIVTTVRKTRGDDIDAACGQLAGDVKD 354


>gi|253999428|ref|YP_003051491.1| radical SAM enzyme, Cfr family [Methylovorus glucosetrophus SIP3-4]
 gi|253986107|gb|ACT50964.1| radical SAM enzyme, Cfr family [Methylovorus glucosetrophus SIP3-4]
          Length = 367

 Score =  400 bits (1027), Expect = e-108,   Method: Composition-based stats.
 Identities = 191/344 (55%), Positives = 243/344 (70%), Gaps = 11/344 (3%)

Query: 534 HELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGT 593
           H LGE PFRAKQL +W+H FGV DF++MTD++ SLR KLK+   I  P I  +QIS DGT
Sbjct: 18  HGLGEKPFRAKQLMRWMHHFGVHDFDQMTDIAKSLRDKLKDQAEITPPGIKLEQISEDGT 77

Query: 594 RKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQ 652
           RKW+      N +ETVFIPE  R TLC+S+QVGCA+ C FCSTGRQGF RNLTV EIIGQ
Sbjct: 78  RKWLIDAGTGNGVETVFIPEAERGTLCVSSQVGCALECTFCSTGRQGFNRNLTVSEIIGQ 137

Query: 653 LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           LWV    L R+       +G R I+N+VMMGMGEPL N+ + + AL ++L D AYGLSRR
Sbjct: 138 LWVANKALGRD------PKGDRIISNVVMMGMGEPLANFDNVVTALNIMLDDSAYGLSRR 191

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V +STSG++P +D+L + CPV LAVSLHA N+ LR+ +VPI+KKYP+KEL+ AC RY+ 
Sbjct: 192 RVTVSTSGMVPAMDRLREACPVALAVSLHAPNDALRDVIVPINKKYPIKELMAACQRYLE 251

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  +TFEY ML G+ND+  HA +L+ ++R       CK NLIPFN FPNS    SK 
Sbjct: 252 KAPRDFVTFEYVMLDGVNDSVEHARQLLDIVRD----VPCKFNLIPFNPFPNSGYDTSKP 307

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
             I+ F  +LM +   VT RK RG+DI+AACGQL+G+  D  ++
Sbjct: 308 EAIRRFRDVLMQADYVVTTRKTRGDDIDAACGQLAGKVQDKTRR 351


>gi|406975066|gb|EKD97949.1| GTP-binding protein engA, partial [uncultured bacterium]
          Length = 412

 Score =  400 bits (1027), Expect = e-108,   Method: Composition-based stats.
 Identities = 193/396 (48%), Positives = 272/396 (68%), Gaps = 6/396 (1%)

Query: 35  GLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQ 94
           GLTRDRHYG G +GK  +I+IDTGGFEP+   GI  EM KQT+QA+ E+D++IF+VD R 
Sbjct: 1   GLTRDRHYGNGKLGKHEYIVIDTGGFEPDASAGIYKEMAKQTRQAVAEADVVIFVVDARA 60

Query: 95  GLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL-DFYELGIGNPHIISALYGNGIKN 153
           G+  QD  I N+LR+ G+P V+V NK+E + +   L +FYELG G    +SA +G GI+ 
Sbjct: 61  GVSAQDHDIANYLRRLGKPCVMVANKAEGMVAGSQLVEFYELGFGEVLAVSAAHGQGIRE 120

Query: 154 FLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
            L+  L    P +   ++ E   +     IK+A+ G+PNVGKSTLIN  LGE R++ +D 
Sbjct: 121 LLDLALLPLQPGEDEIQEAEQPGV-----IKLAVAGRPNVGKSTLINVWLGEERLVAFDL 175

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRD+I   FE N +K+ LIDTAG+RRR K FE IEKFSV+KTL++I  A+VV+LL+D
Sbjct: 176 PGTTRDAISVPFERNGQKFELIDTAGLRRRGKVFEAIEKFSVVKTLQAIESAHVVLLLID 235

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A Q ++ QD +IA +I E+GR++++ VNKWD++   QR+++K +++ +L FL FA  +FI
Sbjct: 236 ATQGVTDQDAHIAGYILENGRAVVLAVNKWDAVDDYQRELVKRSVETRLPFLKFANMHFI 295

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA K   +     SI   Y ++   +ST  +TR L+ A++   P R  + RPKLRYAHQG
Sbjct: 296 SAQKRQGLGPLWASIAQAYKAATCKMSTPVLTRLLLEAVQFQSPQRSGMFRPKLRYAHQG 355

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPP+IVIHGN L+++ + YKR+LE  F + F L+
Sbjct: 356 GMNPPVIVIHGNSLEHVTDAYKRFLEGRFRKEFDLV 391



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 16/160 (10%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           L + GRPNVGKSTL N        +  + PG TRD          + F +IDT G     
Sbjct: 147 LAVAGRPNVGKSTLINVWLGEERLVAFDLPGTTRDAISVPFERNGQKFELIDTAGLR--- 203

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           ++G + E  +     +T QAI  + +++ ++D  QG+ +QD  I  ++ ++G+ +VL +N
Sbjct: 204 RRGKVFEAIEKFSVVKTLQAIESAHVVLLLIDATQGVTDQDAHIAGYILENGRAVVLAVN 263

Query: 120 K--------SENINSSISLDFYELGIGNPHIISALYGNGI 151
           K         E +  S+      L   N H ISA    G+
Sbjct: 264 KWDAVDDYQRELVKRSVETRLPFLKFANMHFISAQKRQGL 303


>gi|205829861|sp|A9BMV6.2|RLMN_DELAS RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
          Length = 374

 Score =  399 bits (1026), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/340 (54%), Positives = 250/340 (73%), Gaps = 6/340 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF++M+DL+ SLR+KLK   +I A  ++++ +S DGT 
Sbjct: 19  QLGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLREKLKACAHITALPVLTEHVSADGTV 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   + +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEI+ QL
Sbjct: 79  KWLFDVGGGDAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEILAQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+    ++ + G+R I+N+VMMGMGEPL NY + + AL+ +L DH YGLSRR 
Sbjct: 139 WYAEHSLRK----RLGTGGERVISNVVMMGMGEPLQNYTALVPALRAMLDDHGYGLSRRR 194

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+L+Q+C V +AVSLHA N+ LR+ LVP+++KYP+ EL+ AC RY+ +
Sbjct: 195 VTVSTSGVVPMIDRLSQDCAVAMAVSLHAPNDELRDPLVPLNRKYPIHELLDACERYLEF 254

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMR-KNKILTSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R +    + CK NLIPFN FP S L+ S  
Sbjct: 255 APRDFITFEYCMLDGVNDQPEHARQLIELVRARGDGRSWCKFNLIPFNPFPASGLLRSPA 314

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +R+  FA +L N+GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 315 ARVTEFASLLSNAGIVTTVRKTRGDDIDAACGQLAGDVKD 354


>gi|160900454|ref|YP_001566036.1| radical SAM protein [Delftia acidovorans SPH-1]
 gi|160366038|gb|ABX37651.1| radical SAM enzyme, Cfr family [Delftia acidovorans SPH-1]
          Length = 397

 Score =  399 bits (1026), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/340 (54%), Positives = 250/340 (73%), Gaps = 6/340 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF++M+DL+ SLR+KLK   +I A  ++++ +S DGT 
Sbjct: 42  QLGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLREKLKACAHITALPVLTEHVSADGTV 101

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   + +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEI+ QL
Sbjct: 102 KWLFDVGGGDAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEILAQL 161

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+    ++ + G+R I+N+VMMGMGEPL NY + + AL+ +L DH YGLSRR 
Sbjct: 162 WYAEHSLRK----RLGTGGERVISNVVMMGMGEPLQNYTALVPALRAMLDDHGYGLSRRR 217

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+L+Q+C V +AVSLHA N+ LR+ LVP+++KYP+ EL+ AC RY+ +
Sbjct: 218 VTVSTSGVVPMIDRLSQDCAVAMAVSLHAPNDELRDPLVPLNRKYPIHELLDACERYLEF 277

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMR-KNKILTSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R +    + CK NLIPFN FP S L+ S  
Sbjct: 278 APRDFITFEYCMLDGVNDQPEHARQLIELVRARGDGRSWCKFNLIPFNPFPASGLLRSPA 337

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +R+  FA +L N+GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 338 ARVTEFASLLSNAGIVTTVRKTRGDDIDAACGQLAGDVKD 377


>gi|238020955|ref|ZP_04601381.1| hypothetical protein GCWU000324_00852 [Kingella oralis ATCC 51147]
 gi|237867935|gb|EEP68941.1| hypothetical protein GCWU000324_00852 [Kingella oralis ATCC 51147]
          Length = 366

 Score =  399 bits (1026), Expect = e-108,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 246/344 (71%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G   F++MTDL+ +LR KL+++  I  P +M+ Q S DGTR
Sbjct: 19  QMGEKPFRAKQVMRWIHQSGAQTFDEMTDLAKALRAKLEDNAVIGIPALMTSQESRDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ NY + I AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KALGVTPKNERVISNVVMMGMGEPMANYDNVITALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L  + PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC+RY+  
Sbjct: 193 VTVSTSGMVPQMDRLKDDMPVALAVSLHASNDKVRDEIVPLNKKYPLKELMAACNRYLAK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA EL+ L++     T CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKPEHARELVQLVKD----TPCKFNLIPFNPFPNSGYERSSNK 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I IF +ILM + +  T+RK RG+DI+AACGQL+G+  D  K++
Sbjct: 309 NINIFKEILMEADLVTTVRKTRGDDIDAACGQLAGQVQDKTKRQ 352


>gi|254248069|ref|ZP_04941390.1| hypothetical protein BCPG_02893 [Burkholderia cenocepacia PC184]
 gi|124872845|gb|EAY64561.1| hypothetical protein BCPG_02893 [Burkholderia cenocepacia PC184]
          Length = 379

 Score =  399 bits (1026), Expect = e-108,   Method: Composition-based stats.
 Identities = 189/340 (55%), Positives = 245/340 (72%), Gaps = 7/340 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRAKQLQ+WIH++   DF+ MTDL+ SLR+KLK    I  P I SD +S DGTRK
Sbjct: 24  LGEKPFRAKQLQRWIHQYNAGDFDGMTDLAKSLREKLKGRASIVMPDIASDHVSTDGTRK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLC+S+Q GCA+NC FCSTG+QGF RNL+  EIIGQL 
Sbjct: 84  WLIDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTAEIIGQLR 143

Query: 655 VTEFKLRRE--KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           + EF LR    +    N + +R +TN+         LNY + + A++L+L D+AYGLSRR
Sbjct: 144 MAEFALRASLGRAPGPNGKAERVVTNVSDDEHERAALNYSAVVPAMRLMLDDNAYGLSRR 203

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V LSTSG++PM+D+L  E PV LAVSLHA N+ LR++LVP++KKYPL+EL+ AC RY+ 
Sbjct: 204 RVTLSTSGVVPMMDRLGAELPVALAVSLHAPNDALRDELVPLNKKYPLRELMAACQRYLK 263

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML G+NDT+ HA EL+++ R       CK NLIPFN FP S LI SK 
Sbjct: 264 VAPRDFITFEYCMLDGVNDTEAHARELLAVTRD----VPCKFNLIPFNPFPESGLIRSKP 319

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +IK FA++L+++G+  T+RK RG+DI+AACGQL+G   D
Sbjct: 320 EQIKRFAQVLIDAGVVTTVRKTRGDDIDAACGQLAGAVKD 359


>gi|296113385|ref|YP_003627323.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
 gi|416157010|ref|ZP_11604856.1| GTP-binding protein EngA [Moraxella catarrhalis 101P30B1]
 gi|416218211|ref|ZP_11624759.1| GTP-binding protein EngA [Moraxella catarrhalis 7169]
 gi|416231831|ref|ZP_11628897.1| GTP-binding protein EngA [Moraxella catarrhalis 46P47B1]
 gi|416237500|ref|ZP_11631010.1| GTP-binding protein EngA [Moraxella catarrhalis BC1]
 gi|416242280|ref|ZP_11633316.1| GTP-binding protein EngA [Moraxella catarrhalis BC7]
 gi|416246888|ref|ZP_11635257.1| GTP-binding protein EngA [Moraxella catarrhalis BC8]
 gi|416255358|ref|ZP_11639195.1| GTP-binding protein EngA [Moraxella catarrhalis O35E]
 gi|295921079|gb|ADG61430.1| GTP-binding protein EngA [Moraxella catarrhalis BBH18]
 gi|326559230|gb|EGE09661.1| GTP-binding protein EngA [Moraxella catarrhalis 46P47B1]
 gi|326559869|gb|EGE10269.1| GTP-binding protein EngA [Moraxella catarrhalis 7169]
 gi|326569645|gb|EGE19697.1| GTP-binding protein EngA [Moraxella catarrhalis BC1]
 gi|326570126|gb|EGE20171.1| GTP-binding protein EngA [Moraxella catarrhalis BC8]
 gi|326570864|gb|EGE20888.1| GTP-binding protein EngA [Moraxella catarrhalis BC7]
 gi|326574414|gb|EGE24356.1| GTP-binding protein EngA [Moraxella catarrhalis 101P30B1]
 gi|326576405|gb|EGE26314.1| GTP-binding protein EngA [Moraxella catarrhalis O35E]
          Length = 472

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/431 (45%), Positives = 289/431 (67%), Gaps = 11/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           +KPV+ L+GRPNVGKSTLFN+LT SR ALVA+  GLTRDR YG+ +   KSFI++DTGG 
Sbjct: 3   IKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAGLTRDRQYGDAHFENKSFIVVDTGGI 62

Query: 61  EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
             E+  G   I   M  Q+  AI E+DI++F+VD R GL+  D  I +FL   G+P+ LV
Sbjct: 63  G-EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLGKPVFLV 121

Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
            NK + ++ +   +F+ LG G P+  +A +G G+ N LE+ LT ++P  +   K E  + 
Sbjct: 122 ANKMDGVHEAAYAEFFALGFGEPYATAASHGRGVTNLLES-LTADMP--EDMPKDELDS- 177

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
              + +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   + Y+LIDT
Sbjct: 178 ---KTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPFEREGRSYVLIDT 234

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR +  E +EKFSV+KTL++I +ANVV+L++DA++ I  QD+++  +  ++GR+++
Sbjct: 235 AGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVLVIDAKEGIVDQDLHMLGYALDAGRAIV 294

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +  +Q+  +K  I ++ NF+ +   + ISA+  N +     SI+  Y++S+ 
Sbjct: 295 VAINKWDGLSQDQKDFVKIEIDRRFNFVPWVKIHLISALYGNGVGKLYPSIHKAYEASMF 354

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            +ST+++TR L  A+ +HPP      R KLRYAH GG NPP+IVIHGN+   +   Y+RY
Sbjct: 355 KVSTNQLTRILEDAVASHPPPMVGGRRIKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRY 414

Query: 418 LEKYFYRTFSL 428
           LE  F   + L
Sbjct: 415 LENVFRNVYKL 425


>gi|333913248|ref|YP_004486980.1| ribosomal RNA large subunit methyltransferase N [Delftia sp. Cs1-4]
 gi|333743448|gb|AEF88625.1| Ribosomal RNA large subunit methyltransferase N [Delftia sp. Cs1-4]
          Length = 397

 Score =  399 bits (1025), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/340 (54%), Positives = 250/340 (73%), Gaps = 6/340 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF++M+DL+ SLR+KLK   +I A  ++++ +S DGT 
Sbjct: 42  QLGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLREKLKACAHITALPVLTEHVSADGTV 101

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   + +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEI+ QL
Sbjct: 102 KWLFDVGGGDAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEILAQL 161

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+    ++ + G+R I+N+VMMGMGEPL NY + + AL+ +L DH YGLSRR 
Sbjct: 162 WYAEHALRK----RLGTGGERVISNVVMMGMGEPLQNYTALVPALRAMLDDHGYGLSRRR 217

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+L+Q+C V +AVSLHA N+ LR+ LVP+++KYP+ EL+ AC RY+ +
Sbjct: 218 VTVSTSGVVPMIDRLSQDCAVAMAVSLHAPNDELRDPLVPLNRKYPIHELLDACERYLEF 277

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMR-KNKILTSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R +    + CK NLIPFN FP S L+ S  
Sbjct: 278 APRDFITFEYCMLDGVNDQPEHARQLIELVRARGDGRSWCKFNLIPFNPFPASGLLRSPA 337

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +R+  FA +L N+GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 338 ARVTEFASLLSNAGIVTTVRKTRGDDIDAACGQLAGDVKD 377


>gi|91788473|ref|YP_549425.1| hypothetical protein Bpro_2611 [Polaromonas sp. JS666]
 gi|123164823|sp|Q12AB5.1|RLMN_POLSJ RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|91697698|gb|ABE44527.1| 23S rRNA m(2)A-2503 methyltransferase [Polaromonas sp. JS666]
          Length = 382

 Score =  399 bits (1025), Expect = e-108,   Method: Composition-based stats.
 Identities = 191/339 (56%), Positives = 244/339 (71%), Gaps = 7/339 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF +MTDL+ SLR+KL  S +I+ P ++S   S DGT K
Sbjct: 20  LGEKRFRATQLFRWIHQKGASDFGQMTDLARSLREKLAGSAHIQGPKVVSRHDSADGTIK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   ++IE VFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEI+ QLW
Sbjct: 80  WLFDVGAGDVIEAVFIPETDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEIVSQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LR+        + +R I+N+VMMGMGEPL NY   + AL+++L DH YGLSRR V
Sbjct: 140 FAEHFLRQHL-----GRQERVISNVVMMGMGEPLQNYSQLVPALRVMLDDHGYGLSRRRV 194

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PMID+LA++CPV LAVSLHA  + LR+ LVP++KKYP+ EL+ AC RY   +
Sbjct: 195 TVSTSGVVPMIDRLAKDCPVALAVSLHAPQDALRDSLVPLNKKYPIAELLQACTRYQASA 254

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKI-LTSCKINLIPFNCFPNSNLICSKNS 833
           PR  ITFEYCML G+ND   HA +L++LM+ +     SCK NLIPFN FP S L  S   
Sbjct: 255 PRDFITFEYCMLDGVNDQPEHARQLVALMQNHSAGGLSCKFNLIPFNPFPASGLKRSAMP 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           ++  FAKILM++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 315 QVAAFAKILMDAGIVTTVRKTRGDDIDAACGQLAGDVQD 353


>gi|350571836|ref|ZP_08940152.1| cfr family radical SAM enzyme [Neisseria wadsworthii 9715]
 gi|349791021|gb|EGZ44914.1| cfr family radical SAM enzyme [Neisseria wadsworthii 9715]
          Length = 362

 Score =  399 bits (1025), Expect = e-108,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 246/344 (71%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +W+H+ G SDF++MTDL+ SLR KL++   +  P +M+ Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWMHQAGASDFDEMTDLAKSLRAKLQDKAEVGVPALMAAQESRDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNL+  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLSAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEPL N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPLANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L +  PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLKEAMPVALAVSLHASNDAVRDEIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFVTFEYVMLDGINDKPQHAKELIELVKD----VPCKFNLIPFNPFPNSGYDRSSND 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F +IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 AIRVFKEILQEAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|264679426|ref|YP_003279333.1| radical SAM enzyme, Cfr family [Comamonas testosteroni CNB-2]
 gi|262209939|gb|ACY34037.1| radical SAM enzyme, Cfr family [Comamonas testosteroni CNB-2]
          Length = 369

 Score =  399 bits (1025), Expect = e-108,   Method: Composition-based stats.
 Identities = 187/340 (55%), Positives = 248/340 (72%), Gaps = 7/340 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF++MTDL+ SLR+KLK+  +I A  ++++ +S DGT 
Sbjct: 15  QLGEKRFRATQLFRWIHQRGASDFDQMTDLAKSLREKLKSRAHITALPVVTEHVSADGTV 74

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E+VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL  GEI+ QL
Sbjct: 75  KWLFDVGDGNAVESVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLNTGEILAQL 134

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+    +      R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR 
Sbjct: 135 WYAEHSLRKRFGTE-----DRIISNVVMMGMGEPLQNYSALVPALRVMLDDHGYGLSRRR 189

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PM+D+L+Q+C V LAVSLHA N+ LR+ LVP++KKYP+ EL+ AC RY+ +
Sbjct: 190 VTVSTSGVVPMMDRLSQDCAVALAVSLHAPNDPLRDNLVPLNKKYPIAELLDACERYLEF 249

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTS-CKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R      S CK NLIPFN FP S L+ S +
Sbjct: 250 APRDFITFEYCMLDGVNDQPEHARQLIELVRARGDGKSWCKFNLIPFNPFPASGLLRSPS 309

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +R+  FA +L N+GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 310 ARVTEFATLLSNAGIVTTVRKTRGDDIDAACGQLAGDVKD 349


>gi|410633389|ref|ZP_11344035.1| GTP-binding protein [Glaciecola arctica BSs20135]
 gi|410147104|dbj|GAC20902.1| GTP-binding protein [Glaciecola arctica BSs20135]
          Length = 483

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/460 (44%), Positives = 299/460 (65%), Gaps = 17/460 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG        FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGTAKYEGLQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AIIE+D+++F+VD R G+   D+ I   LRK  +P+ +V NK
Sbjct: 61  SGD-EQGIDVVMAEQSLLAIIEADVVLFLVDARTGMTAADQGIAEHLRKQEKPVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT--------IELP------Y 165
            + I+  S S DF+ LG+G+ + I+A +G G+   L++ L         + +P       
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLQSALAPIAEQFPDMHIPEESDEEL 179

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
           ++    ++  N+ ++  IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI    
Sbjct: 180 QEIDADEQLANLQALP-IKLAIVGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIFIPM 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E + ++YILIDTAG+RRR    E IEKFS++KTL++I E+NVV+ ++DAQ+ I+ QD+++
Sbjct: 239 ERDGREYILIDTAGVRRRRNISEAIEKFSIVKTLQAIEESNVVLFVVDAQEGITDQDLSL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             FI  +GRSL+V VNKWD +  + ++ IK  + ++L F+ FA  +FISA+    +    
Sbjct: 299 LGFILNAGRSLVVAVNKWDGLNKDVKEEIKRELDRRLGFIDFARLHFISALHGTGVGHLF 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           ES+   Y S+   ++TS +TR +  A ++H P   +  R K++YAH GG NPP+IVIHGN
Sbjct: 359 ESVQEAYASATKRVNTSMLTRIMDMAQEDHQPPVVRGRRVKMKYAHAGGYNPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIYNRYE 445
           +LK + + YKRYL  YF ++  ++    K    E  N YE
Sbjct: 419 QLKDLPDSYKRYLMNYFRKSLKVMGTPIKIEFREGANPYE 458


>gi|418531067|ref|ZP_13096986.1| radical SAM enzyme, Cfr family protein [Comamonas testosteroni ATCC
           11996]
 gi|371451776|gb|EHN64809.1| radical SAM enzyme, Cfr family protein [Comamonas testosteroni ATCC
           11996]
          Length = 373

 Score =  399 bits (1025), Expect = e-108,   Method: Composition-based stats.
 Identities = 186/340 (54%), Positives = 249/340 (73%), Gaps = 7/340 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF++MTDL+ SLR+KLK+  +I A  ++++ +S DGT 
Sbjct: 19  QLGEKRFRATQLFRWIHQRGASDFDQMTDLAKSLREKLKSRAHITALPVVTEHVSADGTV 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E+VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL  GEI+ QL
Sbjct: 79  KWLFDVGDGNAVESVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLNTGEILAQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+    +      R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR 
Sbjct: 139 WYAEHSLRKRFGTE-----DRIISNVVMMGMGEPLQNYSALVPALRVMLDDHGYGLSRRR 193

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PM+D+L+Q+C V LAVSLHA N+ LR+ LVP++KKYP+ EL+ AC RY+ +
Sbjct: 194 VTVSTSGVVPMMDRLSQDCAVALAVSLHAPNDPLRDNLVPLNKKYPIAELLDACERYLEF 253

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMR-KNKILTSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R +    + CK NLIPFN FP S L+ S +
Sbjct: 254 APRDFITFEYCMLDGVNDQPEHARQLIELVRARGDGRSWCKFNLIPFNPFPASGLLRSPS 313

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +R+  FA +L N+GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 314 ARVTEFAALLSNAGIVTTVRKTRGDDIDAACGQLAGDVKD 353


>gi|395003902|ref|ZP_10387999.1| 23S rRNA methyltransferase [Acidovorax sp. CF316]
 gi|394318186|gb|EJE54646.1| 23S rRNA methyltransferase [Acidovorax sp. CF316]
          Length = 396

 Score =  399 bits (1025), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/343 (53%), Positives = 252/343 (73%), Gaps = 7/343 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G  DF+ M+DL+ +LR KL+   +++A  ++++ +S DGT 
Sbjct: 42  KLGEKRFRATQLFRWIHQRGAHDFDAMSDLAKALRDKLRGCAHVQALPVITEHVSADGTV 101

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E VFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEI+ QL
Sbjct: 102 KWLFDVGGGNAVEAVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEIVAQL 161

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+        + +R I+N+VMMGMGEPL NY + + AL+++L DHAYGLSRR 
Sbjct: 162 WFAEHALRKRL-----GKDERVISNVVMMGMGEPLQNYSALVPALRVMLDDHAYGLSRRR 216

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+LAQ+CPV LAVSLHA N+ LR+ LVP+++KYP++EL+ AC+RY+ +
Sbjct: 217 VTVSTSGVVPMIDRLAQDCPVALAVSLHAPNDPLRDNLVPLNRKYPIEELLAACNRYLEH 276

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL-TSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L++  +     CK NLIPFN FP S L+ S +
Sbjct: 277 APRDFITFEYCMLDGVNDQIEHARQLIELVKPARGEGVRCKFNLIPFNPFPASGLLRSSH 336

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
           ++++ F K+L ++GI  T+RK RG+DI+AACGQL+G+  D  K
Sbjct: 337 AQVQAFGKLLSDAGIVTTVRKTRGDDIDAACGQLAGDVKDRTK 379


>gi|421780191|ref|ZP_16216681.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
 gi|407812985|gb|EKF83769.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
          Length = 472

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/431 (45%), Positives = 289/431 (67%), Gaps = 11/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           +KPV+ L+GRPNVGKSTLFN+LT SR ALVA+  GLTRDR YG+ +   KSFI++DTGG 
Sbjct: 3   IKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAGLTRDRQYGDAHFENKSFIVVDTGGI 62

Query: 61  EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
             E+  G   I   M  Q+  AI E+DI++F+VD R GL+  D  I +FL   G+P+ LV
Sbjct: 63  G-EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLGKPVFLV 121

Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
            NK + ++ +   +F+ LG G P+  +A +G G+ N LE+ LT ++P  +   K E  + 
Sbjct: 122 ANKMDGVHEAAYAEFFALGFGEPYATAASHGRGVTNLLES-LTADMP--EDMPKDELDS- 177

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
              + +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   + Y+LIDT
Sbjct: 178 ---KTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPFEREGRSYVLIDT 234

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR +  E +EKFSV+KTL++I +ANVV+L++DA++ I  QD+++  +  ++GR+++
Sbjct: 235 AGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVLVIDAKEGIVDQDLHMLRYALDAGRAIV 294

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +  +Q+  +K  I ++ NF+ +   + ISA+  N +     SI+  Y++S+ 
Sbjct: 295 VAINKWDGLSQDQKDFVKIEIDRRFNFVPWVKIHLISALYGNGVGKLYPSIHKAYEASMF 354

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            +ST+++TR L  A+ +HPP      R KLRYAH GG NPP+IVIHGN+   +   Y+RY
Sbjct: 355 KVSTNQLTRILEDAVASHPPPMVGGRRIKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRY 414

Query: 418 LEKYFYRTFSL 428
           LE  F   + L
Sbjct: 415 LENVFRNVYKL 425


>gi|329297578|ref|ZP_08254914.1| GTP-binding protein Der [Plautia stali symbiont]
          Length = 496

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/458 (44%), Positives = 293/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+ + M +Q+  AI E+D+++F+VD R G++  D+ I N LR   +    V NK
Sbjct: 61  D-GTEEGVENRMAEQSLLAIEEADVVLFLVDARAGVMPADQQIANHLRSRDKATFFVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   + LDFY LG+G  H I+A +G G+ + LE  L   LP+      +E +    
Sbjct: 120 TDGLDPDAAVLDFYALGLGEIHPIAASHGRGVTSLLETAL---LPWMDDIAPREVSEEDE 176

Query: 180 IEY----------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
            E                             IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NEAYWATLAAEENGEALEEEEEEAFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E ++++YILIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDDREYILIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLV 296

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA+  IS QD+++  FI  SGRSL++ VNKWD +    +  +K+ +  +L F+ FA  +
Sbjct: 297 IDARAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEIKDEVKDTLDFRLGFIDFARVH 356

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  ES+   YD S   ++TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESVTEAYDCSTKRVNTSMLTRIMNMAADDHQPPLVRGRRVKLKYAH 416

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++K + + YKRYL  YF R+ +++
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVM 454


>gi|323491635|ref|ZP_08096814.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546]
 gi|323314211|gb|EGA67296.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546]
          Length = 494

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/454 (43%), Positives = 301/454 (66%), Gaps = 27/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I + LRK  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIASHLRKIEKPSMLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKN--------FLENILT-----IE---- 162
            + I++ + S +F++LG+ N + I+A +G G+          F E ++      IE    
Sbjct: 120 VDGIDADAASAEFWQLGVENMYQIAAAHGRGVTALIDLALNPFAEKLMEETSGEIEDLTD 179

Query: 163 -------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
                  L Y +   ++EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 FIDEDEKLDYSEEEAEEEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 238

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA+
Sbjct: 239 TTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVMLVIDAR 298

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           +NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FISA
Sbjct: 299 ENISDQDLSLLGFALNAGRSIVIAVNKWDGLDMDVKEQVKKELDRRLGFVDFARIHFISA 358

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH GG 
Sbjct: 359 LHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPLVRGRRVKLKYAHAGGY 418

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 419 NPPIVVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|410612521|ref|ZP_11323598.1| GTP-binding protein [Glaciecola psychrophila 170]
 gi|410167862|dbj|GAC37487.1| GTP-binding protein [Glaciecola psychrophila 170]
          Length = 483

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/444 (45%), Positives = 292/444 (65%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKYEGLQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AIIE+D+++F+VD R G+   D+ I   LR+  +P+ +V NK
Sbjct: 61  SGD-EQGIDVVMAEQSLLAIIEADVVLFLVDARTGMTAADQGIAEHLRRQEKPVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTI---ELP-----------Y 165
            + I+  S S DF+ LG+G  + I+A +G G+   L+N L     E P            
Sbjct: 120 VDGIDGDSESADFFALGLGGVNQIAAAHGRGVTQLLQNALAPIASEFPDMHIPEESDEAL 179

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
           ++    ++   + ++  IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI    
Sbjct: 180 EEIDADEQLARLQALP-IKLAIVGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIFIPM 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E ++++YILIDTAG+RRR    E +EKFS++KTL++I E+NVV+ ++DAQ+ I+ QD+++
Sbjct: 239 ERDDREYILIDTAGVRRRRNISEAVEKFSIVKTLQAIEESNVVLFVVDAQEGITDQDLSL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             FI  +GRSL+V VNKWD +    ++ IK  + ++L F+ FA  +FISA+    +    
Sbjct: 299 LGFILNAGRSLVVAVNKWDGLDKTVKEDIKRELDRRLGFIDFARLHFISALHGTGVGHLF 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           ES+   Y S+   ++TS +TR +  A ++H P   +  R K++YAH GG NPP+IVIHGN
Sbjct: 359 ESVQEAYASATKRVNTSMLTRIMDMAQEDHQPPVVRGRRVKMKYAHAGGYNPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +LK + + YKRYL  YF ++  ++
Sbjct: 419 QLKDLPDSYKRYLMNYFRKSLKVM 442


>gi|398805477|ref|ZP_10564450.1| 23S rRNA, methyltransferase [Polaromonas sp. CF318]
 gi|398091513|gb|EJL81954.1| 23S rRNA, methyltransferase [Polaromonas sp. CF318]
          Length = 382

 Score =  399 bits (1024), Expect = e-108,   Method: Composition-based stats.
 Identities = 192/339 (56%), Positives = 244/339 (71%), Gaps = 7/339 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G +DF +MTDL+ SLR+KL  S +I+ P ++S   S DGT K
Sbjct: 20  LGEKRFRATQLFRWIHQKGATDFTQMTDLAKSLREKLTGSAHIQGPKVVSRHDSADGTVK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   ++IETVFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEII QLW
Sbjct: 80  WLFDVGAGDVIETVFIPETDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEIISQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LR+        + +R I+N+VMMGMGEPL NY   + ALK++L DH YGLSRR V
Sbjct: 140 FAEHFLRQHL-----GREERVISNVVMMGMGEPLQNYGQLVPALKVMLDDHGYGLSRRRV 194

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PMID+LA +CPV LAVSLHA  + LR+ LVP++KKYP+ EL+ AC RY   +
Sbjct: 195 TVSTSGVVPMIDRLAGDCPVALAVSLHAPEDALRDNLVPLNKKYPIAELLEACTRYQASA 254

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL-TSCKINLIPFNCFPNSNLICSKNS 833
           PR  ITFEYCML G+ND   HA +L++L++ +     SCK NLIPFN FP S L  S   
Sbjct: 255 PRDFITFEYCMLDGVNDQPAHARQLVALVQAHAARGLSCKFNLIPFNPFPASGLKRSDMP 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           ++  FAKILM++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 315 QVAAFAKILMDAGIVTTVRKTRGDDIDAACGQLAGDVQD 353


>gi|257453876|ref|ZP_05619154.1| ribosome-associated GTPase EngA [Enhydrobacter aerosaccus SK60]
 gi|257448803|gb|EEV23768.1| ribosome-associated GTPase EngA [Enhydrobacter aerosaccus SK60]
          Length = 467

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/431 (45%), Positives = 289/431 (67%), Gaps = 12/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN+LT SR ALVA+  GLTRDR YG+    +KSFI+IDTGG 
Sbjct: 1   MKPVVALIGRPNVGKSTLFNQLTRSRQALVADLAGLTRDRQYGDATFEEKSFIVIDTGGI 60

Query: 61  EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
             EV +G   I   M+ Q+  AI E+DII+F+VD R G+   D++I   L   G+P+ L 
Sbjct: 61  G-EVDEGDGTIDDYMSHQSHTAIHEADIIVFVVDSRAGITGADEVIAKQLHTLGKPVFLA 119

Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
            NK + ++ +   +FY LG G P  ++A +G G+ N LE + T  +P      ++E    
Sbjct: 120 ANKMDGVHEAAIHEFYALGFGEPFPMAASHGRGVGNLLEAV-TANMPTDD---QEE---- 171

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
            + + +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   +E +N+ Y+LIDT
Sbjct: 172 QAPDGLRIAIIGRPNVGKSTLVNRLLGEERVVVFDMPGTTRDSIYIPYERDNRHYVLIDT 231

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR +  E +EKFSV+KTL++I +A+VVI+++DAQ+ I+ QD+N+  +  E+GR+++
Sbjct: 232 AGVRRRGRIDEKVEKFSVVKTLQAIKDAHVVIVVIDAQEGITDQDLNLLGYALEAGRAMV 291

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + +NKWD +  +Q+  +K  + ++ NF+ +   + ISA+    + +   SI+  YD+++ 
Sbjct: 292 LAINKWDGLDQDQKNFVKIEMDRRFNFIPYVKVHLISALHGTGVGNLYPSIHRAYDAAMF 351

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            +STSR+T+ L  A+  H P      R KLR+AH GG NPPIIVIHGN+   + N Y+RY
Sbjct: 352 DISTSRLTQILQDAVTAHQPPMVGGRRIKLRFAHLGGHNPPIIVIHGNQTSQVPNSYRRY 411

Query: 418 LEKYFYRTFSL 428
           LE  F + F L
Sbjct: 412 LENEFRKVFKL 422


>gi|313201450|ref|YP_004040108.1| radical sam enzyme, cfr family [Methylovorus sp. MP688]
 gi|312440766|gb|ADQ84872.1| radical SAM enzyme, Cfr family [Methylovorus sp. MP688]
          Length = 367

 Score =  399 bits (1024), Expect = e-108,   Method: Composition-based stats.
 Identities = 190/344 (55%), Positives = 243/344 (70%), Gaps = 11/344 (3%)

Query: 534 HELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGT 593
           H LGE PFRAKQL +W+H FGV DF++MTD++ SLR KLK+   I  P I  +QIS DGT
Sbjct: 18  HGLGEKPFRAKQLMRWMHHFGVHDFDQMTDIAKSLRDKLKDQAEITPPGIKLEQISEDGT 77

Query: 594 RKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQ 652
           RKW+      N +ETVFIPE  R TLC+S+QVGCA+ C FCSTGRQGF RNL+V EIIGQ
Sbjct: 78  RKWLIDAGTGNGVETVFIPEAERGTLCVSSQVGCALECTFCSTGRQGFNRNLSVSEIIGQ 137

Query: 653 LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           LWV    L R+       +G R I+N+VMMGMGEPL N+ + + AL ++L D AYGLSRR
Sbjct: 138 LWVANKALGRD------PKGDRIISNVVMMGMGEPLANFDNVVTALNIMLDDSAYGLSRR 191

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V +STSG++P +D+L + CPV LAVSLHA N+ LR+ +VPI+KKYP+KEL+ AC RY+ 
Sbjct: 192 RVTVSTSGMVPAMDRLREACPVALAVSLHAPNDALRDVIVPINKKYPIKELMAACQRYLE 251

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  +TFEY ML G+ND+  HA +L+ ++R       CK NLIPFN FPNS    SK 
Sbjct: 252 KAPRDFVTFEYVMLDGVNDSVEHARQLLDIVRD----VPCKFNLIPFNPFPNSGYDTSKP 307

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
             I+ F  +LM +   VT RK RG+DI+AACGQL+G+  D  ++
Sbjct: 308 EAIRRFRDVLMQADYVVTTRKTRGDDIDAACGQLAGKVQDKTRR 351


>gi|148653556|ref|YP_001280649.1| GTP-binding protein EngA [Psychrobacter sp. PRwf-1]
 gi|172048545|sp|A5WGA8.1|DER_PSYWF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|148572640|gb|ABQ94699.1| small GTP-binding protein [Psychrobacter sp. PRwf-1]
          Length = 473

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/430 (45%), Positives = 289/430 (67%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKST+FN++T +R ALVA+  GLTRDR YG+     KSF++IDTGG 
Sbjct: 3   MKPVVALIGRPNVGKSTIFNQMTKTRQALVADLSGLTRDRQYGDATYNNKSFVVIDTGGI 62

Query: 61  -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
            E +  +G + + M+ Q+  AI E+DI++F+VD R G++  D  I   L   G+P+ LV 
Sbjct: 63  GEADDGRGSIDDYMSAQSHTAIHEADILVFVVDARAGMIGADAEIGKMLHTLGKPVYLVA 122

Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           NK + ++ +   +FY LG+G P+ ++A +G GI N L++ LT ++P        E     
Sbjct: 123 NKIDGVHDAAPAEFYALGLGEPYPMTASHGRGIANLLDD-LTADMP--------EDVEEE 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +K+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE N K Y+LIDTA
Sbjct: 174 DQGGLKLAIIGRPNVGKSTLVNRMLGEERVVVYDMPGTTRDSIYIPFERNGKNYVLIDTA 233

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR +  E +EKFSVIK L++I +ANVV+ ++DAQ+ I  QD+++  +  ++GR+++V
Sbjct: 234 GVRRRGRIDEKVEKFSVIKALQAIKDANVVVAVIDAQEGIVDQDLHMLGYALDAGRAMVV 293

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +  +++++I+  + ++ NF+ +   +FISA+   N+ +   SI+  Y SS+  
Sbjct: 294 AINKWDGLSEDKKEMIRIELDRRFNFIPYVKVHFISALHGTNVGNLYPSIHKAYASSMFK 353

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST+R+T+ L  A+  +PP      R KLRYAH GG NPPIIVIHGN+   +   Y+RYL
Sbjct: 354 VSTNRLTQILEDAVAANPPPMSGGRRIKLRYAHLGGHNPPIIVIHGNQTGSLPKSYQRYL 413

Query: 419 EKYFYRTFSL 428
           E  F + F+L
Sbjct: 414 ENEFRKVFNL 423


>gi|381393552|ref|ZP_09919273.1| GTP-binding protein [Glaciecola punicea DSM 14233 = ACAM 611]
 gi|379330768|dbj|GAB54406.1| GTP-binding protein [Glaciecola punicea DSM 14233 = ACAM 611]
          Length = 481

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/445 (44%), Positives = 294/445 (66%), Gaps = 20/445 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA++PGLTRDR YG      + FI++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGTATFELRQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
               ++GI   M  Q+  AI E+D+++F+VD R GL   D  I+  LRK  +P+ +V+NK
Sbjct: 61  SGN-EQGIDARMAHQSLLAIEEADVVLFLVDARDGLTPTDIGISEHLRKQEKPVHIVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK--------- 170
            + ++  S S DFY LG+G+   I+A +G G+   +E +L+   P  K FK         
Sbjct: 120 VDGLDGDSESADFYTLGMGSLLQIAAAHGRGVSKLIEAVLS---PLDKIFKDMHVAPPSI 176

Query: 171 ------KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
                  +E       + IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI   
Sbjct: 177 EEETIDAQEKLKQLQAQPIKLAIVGKPNVGKSTLTNRILGEERVVVYDLPGTTRDSIFIP 236

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
            + + ++Y+LIDTAG+R+R K  +V+EKFS++KTL++I EANVV+L++DA++ ++ QD++
Sbjct: 237 MQRDGREYVLIDTAGVRKRKKVSDVVEKFSIVKTLQAIEEANVVLLVVDAREGVAEQDLS 296

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  FI  SGRSL++ VNKWD + ++ +  +K  + ++L F+ FA  +FISA+  + +   
Sbjct: 297 LLGFILNSGRSLVIAVNKWDGLDNHVKDQVKKELDRRLGFVDFARLHFISALHGSGVGHL 356

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            ES+   Y+S+   ++TS +T  +  A  +H P   +  R K++YAH GG NPP+IVIHG
Sbjct: 357 FESVQEAYESATKRINTSMLTDIMEMAQHDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHG 416

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++K + + YKR+L  Y+ R+ S++
Sbjct: 417 NQVKDLPDAYKRFLTNYYRRSLSMM 441


>gi|424776103|ref|ZP_18203088.1| radical SAM superfamily protein 2 [Alcaligenes sp. HPC1271]
 gi|422888563|gb|EKU30949.1| radical SAM superfamily protein 2 [Alcaligenes sp. HPC1271]
          Length = 382

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 190/351 (54%), Positives = 244/351 (69%), Gaps = 9/351 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRA+QLQ+WIH+    DF +MTDL+   R++L  +  + AP +  + IS D
Sbjct: 20  LVAQWGGKPFRARQLQRWIHQRQQDDFGQMTDLAREFREQLTANCVVTAPSMSHEHISTD 79

Query: 592 GTRKWIFHV-KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GTRKW+F V   N +E VFIPE +R TLCIS+Q GC + C FCSTG QGF RNLT  EII
Sbjct: 80  GTRKWLFDVGSNNAVEAVFIPEDDRGTLCISSQAGCTVACPFCSTGYQGFNRNLTTSEII 139

Query: 651 GQLWVTEFKLRREKNI----KINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHA 706
           GQLW     L                 R I+N+VMMGMGEPLLNY   +GAL+L+L D+A
Sbjct: 140 GQLWFARRALLNAPETARIGDAEQTSTRVISNVVMMGMGEPLLNYDQVLGALRLMLDDNA 199

Query: 707 YGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILA 766
           YGLSRR V +STSG++PM+D+LA++CPV LAVSLHA N+ LR++LVP++KKYPL EL+ A
Sbjct: 200 YGLSRRRVTVSTSGVVPMMDRLAKDCPVALAVSLHAPNDALRDRLVPLNKKYPLAELLDA 259

Query: 767 CHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSN 826
           C+RY+ ++PR  ITFEY ML GINDTD HA EL+ + R    +  CK NLIPFN FP S 
Sbjct: 260 CNRYLEHAPRDFITFEYIMLDGINDTDQHAQELLDIAR----IVRCKFNLIPFNPFPQSG 315

Query: 827 LICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
           L  S  +R+K FA+ LM+ G+  T+RK RG+DI AACGQL+G+  D  + E
Sbjct: 316 LKRSSAARVKQFAQRLMDGGVVTTVRKTRGDDIAAACGQLAGDIRDRTRIE 366


>gi|269962406|ref|ZP_06176756.1| GTP-binding protein [Vibrio harveyi 1DA3]
 gi|424045074|ref|ZP_17782641.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-03]
 gi|269832902|gb|EEZ87011.1| GTP-binding protein [Vibrio harveyi 1DA3]
 gi|408886928|gb|EKM25578.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-03]
          Length = 498

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/458 (43%), Positives = 299/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L                   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179

Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                  EL  + + ++    EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAVEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD + ++ ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNDVKENVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+V+HGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYLMNYFRKSLEIM 456


>gi|299530509|ref|ZP_07043929.1| radical SAM enzyme, Cfr family protein [Comamonas testosteroni S44]
 gi|298721485|gb|EFI62422.1| radical SAM enzyme, Cfr family protein [Comamonas testosteroni S44]
          Length = 369

 Score =  398 bits (1023), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/340 (55%), Positives = 248/340 (72%), Gaps = 7/340 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF++MTDL+ SLR+KLK+  +I A  ++++ +S DGT 
Sbjct: 15  QLGEKRFRATQLFRWIHQRGASDFDQMTDLAKSLREKLKSRAHITALPVVTEHVSADGTV 74

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E+VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL  GEI+ QL
Sbjct: 75  KWLFDVGDGNAVESVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLNTGEILAQL 134

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+    +      R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR 
Sbjct: 135 WYAEHSLRKRFGTE-----DRIISNVVMMGMGEPLQNYSALVPALRVMLDDHGYGLSRRR 189

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PM+D+L+Q+C V LAVSLHA N+ LR+ LVP++KKYP+ EL+ AC RY+ +
Sbjct: 190 VTVSTSGVVPMMDRLSQDCAVALAVSLHAPNDPLRDNLVPLNKKYPIAELLDACERYLEF 249

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTS-CKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R      S CK NLIPFN FP S L+ S +
Sbjct: 250 APRDFITFEYCMLDGVNDQLEHARQLIELVRARGDGKSWCKFNLIPFNPFPASGLLRSPS 309

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +R+  FA +L N+GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 310 ARVTEFATLLSNAGIVTTVRKTRGDDIDAACGQLAGDVKD 349


>gi|90408609|ref|ZP_01216764.1| GTP-binding protein EngA [Psychromonas sp. CNPT3]
 gi|90310301|gb|EAS38431.1| GTP-binding protein EngA [Psychromonas sp. CNPT3]
          Length = 488

 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/447 (45%), Positives = 291/447 (65%), Gaps = 19/447 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  + +  FI+IDTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLDEDEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M  Q+  AI E+D ++F+VD R GL+  D+ I + LRK  + + +V NK
Sbjct: 61  TGD-EEGIDSLMAGQSLLAIDEADAVLFMVDARVGLMVADQAIADHLRKQEKKVFIVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT-NIH 178
           ++ I++ S   +FY LG+G  + I+A +G G++  ++  L     + +     EF  +  
Sbjct: 120 TDGIDADSACAEFYALGLGEVYHIAAAHGKGVRKMIDTALDGFFDHSEDLDDAEFDLDPE 179

Query: 179 SIE----------------YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
            IE                 IK+AI+GKPNVGKSTLIN +LGE RV+ +D PGTTRDSI 
Sbjct: 180 LIEDDEEKLLREQQRLADLPIKLAIIGKPNVGKSTLINRILGEERVVVFDQPGTTRDSIY 239

Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
                ++++YILIDTAG+R+R K  E +EKFSVIKTLK+I +ANVV+L++DA+  I+ QD
Sbjct: 240 IPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLKAIEDANVVLLVIDARDGIAEQD 299

Query: 283 INIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNIN 342
           + +  +   SGRSL++ VNKWD +    ++ +K  + ++L F+ FA  +FISA+    + 
Sbjct: 300 LCLLGYTLNSGRSLVIAVNKWDGMTDYDKERVKTELDRRLGFIDFAKIHFISALHGTGVG 359

Query: 343 SFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVI 402
              ES+   YDSS   +STS +TR +  A+ +H P   +  R KLRYAH GG NPP+IVI
Sbjct: 360 HLYESVEEAYDSSTKRISTSMLTRIMTMAVDDHNPPMVQSRRVKLRYAHAGGYNPPLIVI 419

Query: 403 HGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           HGN++K + + YKRYL  YF R+  ++
Sbjct: 420 HGNQVKKLPDSYKRYLMNYFRRSLRIM 446


>gi|118594978|ref|ZP_01552325.1| GTP-binding protein EngA [Methylophilales bacterium HTCC2181]
 gi|118440756|gb|EAV47383.1| GTP-binding protein EngA [Methylophilales bacterium HTCC2181]
          Length = 474

 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/426 (47%), Positives = 288/426 (67%), Gaps = 8/426 (1%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           + +VGRPNVGKS+LFNRLT SRDALVA+ PGLTRDRHYG+  I    FI++DTGGFEP+ 
Sbjct: 4   VAIVGRPNVGKSSLFNRLTKSRDALVADLPGLTRDRHYGKITIEDAQFILVDTGGFEPKK 63

Query: 65  KKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENI 124
           K GI  +M  QT  AI E D+I+F+VDGR+GL   D+ I + +RK+ +  +L+INK+E +
Sbjct: 64  KIGIAKKMALQTLLAIDECDVILFVVDGREGLHPIDQHIADVIRKNDKEKILLINKTEGM 123

Query: 125 NSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYI 183
              I   DFY LG  N   IS+ +G G+    E  L ++L ++    +  F         
Sbjct: 124 QHEIVGADFYSLGFKNILSISSAHGEGVGLLKE--LLVDLNHQDSEPQSIFKGAP----- 176

Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
           K+ IVG+PNVGKSTL+N+L+GE R I +D  GTTRD++   F++N  +++L DTAGIR++
Sbjct: 177 KITIVGRPNVGKSTLVNALVGEERFIVFDQAGTTRDAVSVDFDFNGDRFVLTDTAGIRKK 236

Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
            K FE +EKFSV+KTL ++  ++V+IL++D+   I+ QD+++  FI E+G+S+++ +NKW
Sbjct: 237 GKVFETVEKFSVLKTLAAVESSDVIILVIDSSGGIATQDMHLIGFILETGKSIVIAINKW 296

Query: 304 DSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSR 363
           DS+   +R+ IKN+I  KL F++FA   FISA+K   +   M S+   Y+SS    ST +
Sbjct: 297 DSVSAYEREAIKNDIDLKLPFVNFAEKVFISALKETGLKGLMRSVIKAYESSSRKFSTPQ 356

Query: 364 ITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFY 423
           I   L +AI +H P   K IRPKL++AHQGG NPP I+IHGN L  I  DY RYLE +F 
Sbjct: 357 INEVLANAILSHQPKIIKGIRPKLKFAHQGGLNPPTIIIHGNHLTDIRKDYVRYLETFFR 416

Query: 424 RTFSLI 429
           + F+L+
Sbjct: 417 KAFNLV 422



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 16/170 (9%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           P + +VGRPNVGKSTL N L      +V +  G TRD    +       F++ DT G   
Sbjct: 176 PKITIVGRPNVGKSTLVNALVGEERFIVFDQAGTTRDAVSVDFDFNGDRFVLTDTAGIR- 234

Query: 63  EVKKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
             KKG + E  +     +T  A+  SD+II ++D   G+  QD  +  F+ ++G+ IV+ 
Sbjct: 235 --KKGKVFETVEKFSVLKTLAAVESSDVIILVIDSSGGIATQDMHLIGFILETGKSIVIA 292

Query: 118 INK--------SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENIL 159
           INK         E I + I L    +       ISAL   G+K  + +++
Sbjct: 293 INKWDSVSAYEREAIKNDIDLKLPFVNFAEKVFISALKETGLKGLMRSVI 342



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 2/126 (1%)

Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
           I VAIVG+PNVGKS+L N L      +  D PG TRD         + ++IL+DT G   
Sbjct: 2   ISVAIVGRPNVGKSSLFNRLTKSRDALVADLPGLTRDRHYGKITIEDAQFILVDTGGFEP 61

Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
           + K    I K   ++TL +I E +V++ ++D ++ +   D +IA+ I ++ +  I+ +NK
Sbjct: 62  KKKIG--IAKKMALQTLLAIDECDVILFVVDGREGLHPIDQHIADVIRKNDKEKILLINK 119

Query: 303 WDSIIH 308
            + + H
Sbjct: 120 TEGMQH 125


>gi|388601634|ref|ZP_10160030.1| GTP-binding protein Der [Vibrio campbellii DS40M4]
          Length = 498

 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/458 (43%), Positives = 299/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L                   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179

Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                  EL  + + +++   EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAVEDYTEEEAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+V+HGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYLMNYFRKSLEIM 456


>gi|333375090|ref|ZP_08466914.1| cfr family radical SAM enzyme [Kingella kingae ATCC 23330]
 gi|332971507|gb|EGK10457.1| cfr family radical SAM enzyme [Kingella kingae ATCC 23330]
          Length = 364

 Score =  398 bits (1022), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 245/344 (71%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G  +F +MTDL+ SLR KL+    +  P +M+ Q S DGTR
Sbjct: 19  QMGEKPFRAKQVMRWIHQGGAENFEQMTDLAKSLRAKLEQQAEVGIPALMTSQESKDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNL+  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPETERGTLCISSQVGCALECTFCSTGRQGFNRNLSAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEPL NY + I AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KALGVTPKNERVISNVVMMGMGEPLANYDNVITALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L ++ PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC+RY+  
Sbjct: 193 VTVSTSGMVPQMDRLKEDMPVALAVSLHASNDKVRDEIVPLNKKYPLKELMAACNRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA EL+ L++     T CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGVNDKPEHARELVELVKD----TPCKFNLIPFNPFPNSGYERSSNK 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I IF +ILM + +  T+RK RG+DI+AACGQL+G+  D  K++
Sbjct: 309 NINIFKEILMEADLVTTVRKTRGDDIDAACGQLAGQVKDKTKRQ 352


>gi|153833535|ref|ZP_01986202.1| GTP-binding protein EngA [Vibrio harveyi HY01]
 gi|148870186|gb|EDL69127.1| GTP-binding protein EngA [Vibrio harveyi HY01]
          Length = 498

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/459 (43%), Positives = 298/459 (64%), Gaps = 33/459 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENIL------------------- 159
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L                   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179

Query: 160 ---------TIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVIT 210
                    T+E  Y +   + EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ 
Sbjct: 180 LTEFEDEELTVE-DYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVV 237

Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
           YD PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L
Sbjct: 238 YDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLL 297

Query: 271 LLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMF 330
           ++DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  
Sbjct: 298 VIDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARI 357

Query: 331 NFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYA 390
           +FISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YA
Sbjct: 358 HFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYA 417

Query: 391 HQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           H GG NPPI+V+HGN ++ + + YKRYL  YF ++  ++
Sbjct: 418 HAGGYNPPIVVVHGNMVRDLPDSYKRYLMNYFRKSLEIM 456


>gi|291613882|ref|YP_003524039.1| histidyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583994|gb|ADE11652.1| histidyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 423

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/355 (52%), Positives = 271/355 (76%), Gaps = 7/355 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D+LNGD L+LRPEGTAS +R+V+++NL+Y+ P+RL+YSGPMFRHE
Sbjct: 58   GEVTDIVEKEMYSFRDDLNGDELTLRPEGTASCVRAVLQHNLLYNAPQRLYYSGPMFRHE 117

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIGVEA+GF GPDIDAE I+MC+RLWK L ++++ L++N++G+   R++
Sbjct: 118  RPQKGRYRQFHQIGVEAMGFAGPDIDAEQIVMCARLWKKLGIRDVALQINTLGDVAARQR 177

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y ++HKD      D +  LY N LR+LD+KN  ++E++  APKL+D L++D++
Sbjct: 178  HREKLIAYFEQHKDV--LDADGQRRLYSNPLRILDTKNPAMQELVAAAPKLMDELDEDAI 235

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q IL  + I+++IN +LVRG+DYYNRTVFEW T +LG+Q +IC GGR+D LI++
Sbjct: 236  THFEAVQAILQQHGIAFEINPRLVRGLDYYNRTVFEWVTTRLGAQGTICAGGRFDGLIEQ 295

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFA+G+ERL+ L+++  +  N +   D+Y+VH G++A ++A+ ++E+LR  
Sbjct: 296  IGGKPAPACGFAMGVERLLALLQEDGM-QNPAAPLDVYVVHQGEQARIQAWRVAEDLRDG 354

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 1222
            GL+V+L+C       SFKSQMK+A+AS A  AAIIG++E+  N +++K LR+  E
Sbjct: 355  GLRVLLHCGGG----SFKSQMKKADASAAVCAAIIGDDEVAANVVMLKPLRSGGE 405


>gi|256823051|ref|YP_003147014.1| small GTP-binding protein [Kangiella koreensis DSM 16069]
 gi|256796590|gb|ACV27246.1| small GTP-binding protein [Kangiella koreensis DSM 16069]
          Length = 467

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/430 (45%), Positives = 289/430 (67%), Gaps = 4/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVAN PGLTRDR YG+  +  + FI++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTKSRDALVANLPGLTRDRQYGQATLKGQKFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M  Q+  AI E++I++F+VD R G+   D+ + + LR+  +PI++++NK
Sbjct: 61  AGD-EEGIDGLMAGQSLLAITEANIVLFLVDARTGMTAADEFVADHLRRQNKPIIVLVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + I++  +L D+Y LG      ++A +G G+   ++ I   EL + +   + +      
Sbjct: 120 VDGIHADAALSDYYSLGYQTVLPLAAAHGRGVNTLVDTIFD-EL-HLESNDEDQLIGYEK 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + +K+AIVG+PNVGKSTL+N  LGE RV+ YD PGTTRDSI    E  +KKY LIDTAG
Sbjct: 178 AQGLKLAIVGRPNVGKSTLVNRFLGEERVVVYDLPGTTRDSIYIEMERRDKKYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E +EKFSV+KTL++I ++NV I+++DA++ I+ QD+++ ++I +SGRS+++ 
Sbjct: 238 VRRRGKVKETVEKFSVLKTLQAIDDSNVSIMVMDAREPITDQDLSLISYIIDSGRSMVIA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   QR  +K+ I ++L F+ FA  +FISA+  +N+    ES++  + S+ + +
Sbjct: 298 INKWDGMTEEQRDTVKHEIDRRLGFIDFARIHFISALHGSNVGHLWESVDEAWASAQVEM 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S S++TR L  A + H P   +  R KLRYAH GG NPP+IVIHGN+   +   YKR+L 
Sbjct: 358 SASKLTRLLEEASEKHQPPTVRGRRVKLRYAHPGGHNPPLIVIHGNQCSKLPESYKRFLI 417

Query: 420 KYFYRTFSLI 429
            +F     LI
Sbjct: 418 NFFRDKLKLI 427


>gi|418041593|ref|ZP_12679812.1| ribosome-associated GTPase EngA [Escherichia coli W26]
 gi|424129285|ref|ZP_17862201.1| ribosome-associated GTPase EngA [Escherichia coli PA9]
 gi|424142124|ref|ZP_17874020.1| ribosome-associated GTPase EngA [Escherichia coli PA14]
 gi|424576622|ref|ZP_18016706.1| ribosome-associated GTPase EngA [Escherichia coli EC1845]
 gi|425145201|ref|ZP_18545203.1| ribosome-associated GTPase EngA [Escherichia coli 10.0869]
 gi|425157173|ref|ZP_18556446.1| ribosome-associated GTPase EngA [Escherichia coli PA34]
 gi|425187634|ref|ZP_18584917.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1997]
 gi|428948180|ref|ZP_19020474.1| ribosome-associated GTPase EngA [Escherichia coli 88.1467]
 gi|428972540|ref|ZP_19042891.1| ribosome-associated GTPase EngA [Escherichia coli 90.0039]
 gi|444953882|ref|ZP_21271982.1| ribosome-associated GTPase EngA [Escherichia coli 99.0848]
 gi|444970538|ref|ZP_21287905.1| ribosome-associated GTPase EngA [Escherichia coli 99.1793]
 gi|445046306|ref|ZP_21361561.1| ribosome-associated GTPase EngA [Escherichia coli 3.4880]
 gi|383475452|gb|EID67412.1| ribosome-associated GTPase EngA [Escherichia coli W26]
 gi|390683364|gb|EIN59060.1| ribosome-associated GTPase EngA [Escherichia coli PA9]
 gi|390700767|gb|EIN75048.1| ribosome-associated GTPase EngA [Escherichia coli PA14]
 gi|390919977|gb|EIP78297.1| ribosome-associated GTPase EngA [Escherichia coli EC1845]
 gi|408069878|gb|EKH04260.1| ribosome-associated GTPase EngA [Escherichia coli PA34]
 gi|408103688|gb|EKH36018.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1997]
 gi|408590980|gb|EKK65432.1| ribosome-associated GTPase EngA [Escherichia coli 10.0869]
 gi|427208152|gb|EKV78289.1| ribosome-associated GTPase EngA [Escherichia coli 88.1467]
 gi|427227685|gb|EKV96216.1| ribosome-associated GTPase EngA [Escherichia coli 90.0039]
 gi|444563073|gb|ELV40108.1| ribosome-associated GTPase EngA [Escherichia coli 99.0848]
 gi|444578971|gb|ELV54992.1| ribosome-associated GTPase EngA [Escherichia coli 99.1793]
 gi|444659365|gb|ELW31783.1| ribosome-associated GTPase EngA [Escherichia coli 3.4880]
          Length = 487

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/451 (44%), Positives = 293/451 (64%), Gaps = 30/451 (6%)

Query: 4   VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
           ++ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG +  
Sbjct: 1   MVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGID-G 59

Query: 64  VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
            + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK++ 
Sbjct: 60  TEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDG 119

Query: 124 INSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
           ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +    EY
Sbjct: 120 LDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-EDAEY 175

Query: 183 ------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTR 218
                                   IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTR
Sbjct: 176 WAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTR 235

Query: 219 DSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
           DSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA++ I
Sbjct: 236 DSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGI 295

Query: 279 SAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKL 338
           S QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA+  
Sbjct: 296 SDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHG 355

Query: 339 NNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPP 398
           + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG NPP
Sbjct: 356 SGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPP 415

Query: 399 IIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           I+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 IVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 446


>gi|149190086|ref|ZP_01868363.1| GTP-binding protein EngA [Vibrio shilonii AK1]
 gi|148836116|gb|EDL53076.1| GTP-binding protein EngA [Vibrio shilonii AK1]
          Length = 494

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/456 (43%), Positives = 298/456 (65%), Gaps = 32/456 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P  LVINK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTSADEAIAQHLRKIEKPSFLVINK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
            + I++ + S +F++LG+ + + I+A +G G+   +E  L    P+ + F ++       
Sbjct: 120 VDGIDADAASAEFWQLGVEDMYHIAAAHGRGVTALIERALN---PFAESFVEQGEIEDLT 176

Query: 173 -------------------EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
                              EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 EFEDEEEEKLDYTEEEAEEEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 235

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + ++++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++D
Sbjct: 236 PGTTRDSIYIPMQRDDREYVLIDTAGVRRRRRINETVEKFSVVKTLKAVEDANVVLLVID 295

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 296 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFI 355

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A ++H P   +  R KL+YAH G
Sbjct: 356 SALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAG 415

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPI+V+HGN +  + + YKRYL  Y+ R+  ++
Sbjct: 416 GYNPPIVVVHGNLVNELPDSYKRYLMNYYRRSLEIM 451


>gi|424032156|ref|ZP_17771576.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-01]
 gi|424042347|ref|ZP_17780087.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-02]
 gi|408876161|gb|EKM15290.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-01]
 gi|408889698|gb|EKM28043.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-02]
          Length = 498

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/458 (43%), Positives = 298/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L                   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179

Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                  EL  + + ++    EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAIEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVIHGNMVRDLPDSYKRYLMNYFRKSLEIM 456


>gi|291618407|ref|YP_003521149.1| EngA [Pantoea ananatis LMG 20103]
 gi|378766159|ref|YP_005194620.1| GTP-binding protein EngA [Pantoea ananatis LMG 5342]
 gi|386016727|ref|YP_005935017.1| GTP-binding protein EngA [Pantoea ananatis AJ13355]
 gi|386078393|ref|YP_005991918.1| GTP-binding protein EngA [Pantoea ananatis PA13]
 gi|291153437|gb|ADD78021.1| EngA [Pantoea ananatis LMG 20103]
 gi|327394799|dbj|BAK12221.1| GTP-binding protein EngA [Pantoea ananatis AJ13355]
 gi|354987574|gb|AER31698.1| GTP-binding protein EngA [Pantoea ananatis PA13]
 gi|365185633|emb|CCF08583.1| GTP-binding protein EngA [Pantoea ananatis LMG 5342]
          Length = 494

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/456 (44%), Positives = 290/456 (63%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R G++  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   + +DFY LG+G  H I+A +G G+ + LE  L   LP+ +     E T    
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIHAIAASHGRGVTSLLETAL---LPWMEKVDPVEVTEEDE 176

Query: 180 IEY--------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
            E                           IK+AIVG+PNVGKSTL N +LGE+RV+ YD 
Sbjct: 177 NEAYWAALAAEENGEEEEEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLVID 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A+  IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +FI
Sbjct: 297 ARAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARVHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+  + + +  ES+   YD S   ++TS +TR +  A ++H P   +  R KL+YAH G
Sbjct: 357 SALHGSGVGNLFESVTEAYDCSTKRVNTSLLTRIMNMAAEDHQPPLVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPI+VIHGN++K + + YKRYL  YF R+ +++
Sbjct: 417 GYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVM 452


>gi|119505385|ref|ZP_01627459.1| predicted GTPase [marine gamma proteobacterium HTCC2080]
 gi|119458840|gb|EAW39941.1| predicted GTPase [marine gamma proteobacterium HTCC2080]
          Length = 472

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/429 (46%), Positives = 283/429 (65%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT SRDALVAN  GLTRDR YGEG IG   FI+IDTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNQLTRSRDALVANLSGLTRDRKYGEGKIGDAPFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E + GI   M  Q++ AI E+DI++ +VDGR GL   D+ + ++LR+  +P  LV+NK
Sbjct: 61  SGE-ELGIDAAMADQSRVAIDEADIVLLLVDGRAGLHPGDESLVSYLRQRSKPFHLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +   I+  DFY LG    H I+A +  G+   + +++   LP      +    +  +
Sbjct: 120 IDGVGEDIAASDFYRLGCSQLHTIAASHNRGVLQLITSVID-ALP------QAAPADALN 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I+VA+VG+PNVGKSTL+N LLGE+RV+ +D PGTTRDS+   +E +++ Y LIDTAG
Sbjct: 173 DPSIRVAVVGRPNVGKSTLVNRLLGEDRVVVFDKPGTTRDSVYIRYERHDQAYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    EV+EKFS++KTLK+I EA+VVILL+DA + +  QD+++     ++GR L+V 
Sbjct: 233 VRRRKNVREVVEKFSIVKTLKAINEAHVVILLMDAHEGLVEQDLHLLGQCIDAGRGLVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD I  ++R  I++ + ++L F+ +A  +FISA+    +    ESI+  + ++   L
Sbjct: 293 INKWDGIASDERDWIRSELNRRLQFVDYADVHFISALHGTGVGHLYESIHQAHRAATTSL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T+++TR L  A+  HPP      R KLRYAH GG+NPPI+VIHG++   +   Y RYLE
Sbjct: 353 NTNKLTRILEDAVATHPPPLVNGRRVKLRYAHAGGQNPPIVVIHGSQTDALPASYARYLE 412

Query: 420 KYFYRTFSL 428
           K F R   L
Sbjct: 413 KTFRRVLEL 421


>gi|384085560|ref|ZP_09996735.1| GTP-binding protein Der [Acidithiobacillus thiooxidans ATCC 19377]
          Length = 445

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/429 (44%), Positives = 285/429 (66%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKST FNRLT +R+ALVA++PGLTRDRHYG      + +++IDTGGF
Sbjct: 1   MTAVIALVGRPNVGKSTFFNRLTRTREALVADFPGLTRDRHYGTAQFEGRQYLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EPE ++G++  M  QT+ AI E+D I F+VD ++GL  QD+ I   LR+ G+PI LV+NK
Sbjct: 61  EPEEREGLVAAMAIQTRLAIQEADAICFLVDAKEGLSAQDEEIAMELRRGGKPIYLVVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +   +   L +F+ LG+G P+ ISA +G+G++  LE + + +LP       +E     +
Sbjct: 121 MDAKGAVSELPEFHRLGLGMPYTISAAHGHGVETLLEAVFS-DLP------SEEIAQQDA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            +  ++A++G+PNVGKSTL+N++LGE RV+ +D PGTTRDSI+  +E + K Y++IDTAG
Sbjct: 174 GKGPRIAMLGRPNVGKSTLVNAMLGEKRVLVFDEPGTTRDSIRIPYERDGKPYVMIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  E +EK SV+KTL ++ EA+VV+L+LDA+  I+ QD ++     E GR ++V 
Sbjct: 234 MRRRARVGEGLEKLSVLKTLGALREADVVLLVLDARVGIAEQDSHLVGVAVELGRPIVVV 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  ++RK +K  ++++L+F+ +A    ISA+    +    +SI+ ++  S  H 
Sbjct: 294 INKWDGMSPHERKAVKQELERRLSFIQYAPVYTISALHGTGVGDLYKSIDRLWQDSRKHF 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  + RAL   I+ H P      R KLRY HQGG+NP  +V HGN+L  +   YKRYLE
Sbjct: 354 STGELNRALGEIIETHQPPMVGGRRIKLRYCHQGGENPVTLVFHGNQLTRLPGSYKRYLE 413

Query: 420 KYFYRTFSL 428
             F +   L
Sbjct: 414 SAFRKALRL 422


>gi|351731457|ref|ZP_08949148.1| radical SAM protein [Acidovorax radicis N35]
          Length = 374

 Score =  397 bits (1021), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/341 (54%), Positives = 248/341 (72%), Gaps = 7/341 (2%)

Query: 534 HELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGT 593
            +LGE  FRA QL +WIH+ G SDF+ M+DL+ +LR KLK    ++A  ++S+ +S DGT
Sbjct: 19  QQLGEKRFRATQLFRWIHQRGASDFDAMSDLAKALRDKLKGCARVEALPVVSEHVSSDGT 78

Query: 594 RKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQ 652
            KW+F V   N +E VFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEII Q
Sbjct: 79  VKWLFDVGDGNAVEAVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEIIAQ 138

Query: 653 LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           LW  E  LR+    ++ S+  R I+N+VMMGMGEPL NY + + AL+ +L DH YGLSRR
Sbjct: 139 LWFAEHSLRQ----RLKSE-DRVISNVVMMGMGEPLQNYSALVPALRTMLDDHGYGLSRR 193

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V +STSG++PM+D+L+Q+CPV LAVSLHA N+ LR+ LVP+++KYP+ EL+ AC+RY+ 
Sbjct: 194 RVTVSTSGVVPMMDRLSQDCPVALAVSLHAPNDPLRDNLVPLNRKYPIDELLAACNRYLA 253

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL-TSCKINLIPFNCFPNSNLICSK 831
           ++PR  ITFEYCML G+ND   HA +LI L++  +     CK NLIPFN FP S L+ S 
Sbjct: 254 HAPRDFITFEYCMLDGVNDQVEHARQLIELVKPARGEGVRCKFNLIPFNPFPASGLLRSP 313

Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            S++  FAK+L  +GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 314 QSQVLAFAKVLSEAGIVTTVRKTRGDDIDAACGQLAGDVKD 354


>gi|333369528|ref|ZP_08461640.1| ribosome-associated GTPase EngA [Psychrobacter sp. 1501(2011)]
 gi|332970913|gb|EGK09889.1| ribosome-associated GTPase EngA [Psychrobacter sp. 1501(2011)]
          Length = 473

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/430 (44%), Positives = 288/430 (66%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           +KPV+ L+GRPNVGKST+FN++T +R ALVA+  GLTRDR YG+     KSF++IDTGG 
Sbjct: 3   IKPVVALIGRPNVGKSTIFNQMTKTRQALVADLSGLTRDRQYGDATYNNKSFVVIDTGGI 62

Query: 61  --EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
               + + GI   M+ Q+  AI E+DII+F+VD R G++  D  I   L   G+P+ LV 
Sbjct: 63  GEADDGRGGIDDYMSAQSHTAIHEADIIVFVVDARAGMIGADAEIGKMLHTLGKPVYLVA 122

Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           NK + ++ +   +FY LG+G P+ ++A +G GI N L++ LT  +P        E     
Sbjct: 123 NKIDGVHDAAPAEFYALGLGEPYPMTASHGRGIGNLLDD-LTENMP--------EDVEEE 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +K+AI+G+PNVGKSTL+N +LGE+RV+ YD PGTTRDSI   +E N K Y+LIDTA
Sbjct: 174 DQGGLKLAIIGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSIYIPYERNGKNYVLIDTA 233

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR +  E +EKFSV+KTL++I ++NVV+ ++DAQ+ I  QD+++  +  ++GR+++V
Sbjct: 234 GVRRRGRIDEKVEKFSVVKTLQAIKDSNVVVAVIDAQEGIVDQDLHMLGYALDAGRAIVV 293

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +  +Q+ +I+  I+++ NF+ +   +FISA+   N+ +   SI+  Y+SS+  
Sbjct: 294 AINKWDGLSDDQKDLIRFEIERRFNFIPYVKVHFISALHGTNVGNLYPSIHKAYESSMFK 353

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST+R+T+ L  A+  +PP      R KLRYAH GG NPPI+VIHGN+   +   Y+RYL
Sbjct: 354 VSTNRLTQILEDAVAANPPPMSGGRRIKLRYAHLGGHNPPIVVIHGNQTGSLPKSYQRYL 413

Query: 419 EKYFYRTFSL 428
           E  F + F L
Sbjct: 414 ENEFRKVFKL 423


>gi|381400771|ref|ZP_09925691.1| ribosomal RNA large subunit methyltransferase N [Kingella kingae
           PYKK081]
 gi|380834257|gb|EIC14105.1| ribosomal RNA large subunit methyltransferase N [Kingella kingae
           PYKK081]
          Length = 364

 Score =  397 bits (1021), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 245/344 (71%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G  +F +MTDL+ SLR KL+    +  P +M+ Q S DGTR
Sbjct: 19  QMGEKPFRAKQVMRWIHQGGAENFEQMTDLAKSLRAKLEQQAEVGIPALMTSQESKDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNL+  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPETERGTLCISSQVGCALECTFCSTGRQGFNRNLSAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEPL NY + I AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KALGVTPKNERVISNVVMMGMGEPLANYDNVITALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L ++ PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC+RY+  
Sbjct: 193 VTVSTSGMVPQMDRLKEDMPVALAVSLHASNDKVRDEIVPLNKKYPLKELMAACNRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA EL+ L++     T CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGVNDKPEHARELVELVKD----TPCKFNLIPFNPFPNSGYERSSNK 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I IF +ILM + +  T+RK RG+DI+AACGQL+G+  D  K++
Sbjct: 309 NINIFKEILMEANLVTTVRKTRGDDIDAACGQLAGQVKDKTKRQ 352


>gi|119476373|ref|ZP_01616724.1| predicted GTPase [marine gamma proteobacterium HTCC2143]
 gi|119450237|gb|EAW31472.1| predicted GTPase [marine gamma proteobacterium HTCC2143]
          Length = 466

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/430 (45%), Positives = 288/430 (66%), Gaps = 7/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVAN PGLTRDR YGE  +G + FI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKTRDALVANLPGLTRDRKYGEARVGSRRFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M +Q+  A+ E+D + F+ D R GL   D  + N LR+S +P+  + NK
Sbjct: 61  TGE-EEGIDVAMAQQSMLAVDEADAVFFLCDSRAGLTAGDHALANKLRQSDKPVYYIANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + ++ ++++ DFY+LGI   + ++A +G G++N L+++L   L +    +++E  + H 
Sbjct: 120 IDGVDPNVAMADFYQLGIEKLYPMTATHGKGVRNLLDDML---LQFPDSNQEEEEQDKH- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               K+AI+G+PNVGKSTL+N LLGE RVI +D PGTTRDSI   +E   + Y LIDTAG
Sbjct: 176 -RGTKIAIIGRPNVGKSTLVNRLLGEERVIVFDHPGTTRDSIYIDYEREGQPYTLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E +EKFS++K LK+I +ANVV+L++DA + +  QD+++     ++GR+L++ 
Sbjct: 235 VRRRKNVRETVEKFSIVKALKAIDDANVVVLVMDAAEGLVDQDLHLLGHAIDAGRALVIA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + +  +K  ++++L F+ FA  +FISA+    +    ES++  Y SS+  L
Sbjct: 295 LNKWDGLDIDHKTWVKRELERRLQFIDFAEIHFISALHGTGVGHLYESVDKAYRSSMEKL 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T+++T+ L  A+ +H P      R KLRYAH GG NPPIIVIHGN+   +   Y+RYLE
Sbjct: 355 QTNKLTQILEGAVFDHAPPMINGRRIKLRYAHAGGSNPPIIVIHGNQTAKVPASYRRYLE 414

Query: 420 KYFYRTFSLI 429
           K F R  +LI
Sbjct: 415 KVFRRELNLI 424


>gi|156973384|ref|YP_001444291.1| GTP-binding protein EngA [Vibrio harveyi ATCC BAA-1116]
 gi|166225933|sp|A7MZE5.1|DER_VIBHB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|156524978|gb|ABU70064.1| hypothetical protein VIBHAR_01071 [Vibrio harveyi ATCC BAA-1116]
          Length = 498

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/458 (43%), Positives = 298/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L                   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEDGEIED 179

Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                  EL  + + ++    EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAVEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+V+HGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYLMNYFRKSLEIM 456


>gi|416249821|ref|ZP_11636918.1| GTP-binding protein EngA [Moraxella catarrhalis CO72]
 gi|326575993|gb|EGE25916.1| GTP-binding protein EngA [Moraxella catarrhalis CO72]
          Length = 472

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/431 (45%), Positives = 289/431 (67%), Gaps = 11/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           +KPV+ L+GRPNVGKSTLFN+LT SR ALVA+  GLTRDR YG+ +   KSFI++DTGG 
Sbjct: 3   IKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAGLTRDRQYGDAHFENKSFIVVDTGGI 62

Query: 61  EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
             E+  G   I   M  Q+  AI E+DI++F+VD R GL+  D  I +FL   G+P+ LV
Sbjct: 63  G-EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLGKPVFLV 121

Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
            NK + ++ +   +F+ LG G P+  +A +G G+ N LE+ LT ++P  +   K E  + 
Sbjct: 122 ANKMDGVHEAAYAEFFALGFGEPYATAASHGRGVTNLLES-LTADMP--EDMPKDELDS- 177

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
              + +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   + Y+LIDT
Sbjct: 178 ---KTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPFEREGRSYVLIDT 234

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR +  E +EKFSV+KTL++I +ANVV++++DA++ I  QD+++  +  ++GR+++
Sbjct: 235 AGVRRRGRIDEKVEKFSVVKTLQAIKDANVVMVVIDAKEGIVDQDLHMLGYALDAGRAIV 294

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +  +Q+  +K  I ++ NF+ +   + ISA+  N +     SI+  Y++S+ 
Sbjct: 295 VAINKWDGLSQDQKDFVKIEIDRRFNFVPWVKIHLISALYGNGVGKLYPSIHKAYEASMF 354

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            +ST+++TR L  A+ +HPP      R KLRYAH GG NPP+IVIHGN+   +   Y+RY
Sbjct: 355 KVSTNQLTRILEDAVASHPPPMVGGRRIKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRY 414

Query: 418 LEKYFYRTFSL 428
           LE  F   + L
Sbjct: 415 LENVFRNVYKL 425


>gi|34498996|ref|NP_903211.1| hypothetical protein CV_3541 [Chromobacterium violaceum ATCC 12472]
 gi|81654669|sp|Q7NS85.1|RLMN_CHRVO RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|34104846|gb|AAQ61203.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 364

 Score =  397 bits (1021), Expect = e-107,   Method: Composition-based stats.
 Identities = 183/344 (53%), Positives = 243/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +W+H+    DF+ MTDL+ SLR KL     ++ P +M+ Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWMHQMAEDDFDAMTDLAKSLRAKLHERAEVRVPSLMTGQASSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLC+S+QVGCA+ C FCSTGRQGF RNL+  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEDDRGTLCVSSQVGCALECTFCSTGRQGFNRNLSTAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R ++N+VMMGMGEPL N+ + + A++++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVVSNVVMMGMGEPLANFDNVVSAMQIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V LSTSG++P +D+L +ECPV LAVSLHA N+ +R+ +VPI+KKYPL EL+ AC RY+  
Sbjct: 193 VTLSTSGLVPQMDRLREECPVALAVSLHAPNDAIRDVIVPINKKYPLSELMAACRRYLEK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA +L+ L+R       CK NLIPFN FPNS    S N+
Sbjct: 253 APRDFITFEYVMLDGVNDRPEHARQLLELVRD----VPCKFNLIPFNPFPNSGYDRSSNN 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I+IF +IL   G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 AIRIFREILQEQGYVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|398795011|ref|ZP_10554953.1| ribosome-associated GTPase EngA [Pantoea sp. YR343]
 gi|398207290|gb|EJM94040.1| ribosome-associated GTPase EngA [Pantoea sp. YR343]
          Length = 496

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/458 (44%), Positives = 293/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+ + M +Q+  AI E+D+++F+VD R G++  D+ I N LR   +   +V NK
Sbjct: 61  D-GTEEGVENRMAEQSLLAIEEADVVLFMVDARAGVMPADQQIANHLRAREKATFVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF--KKKEFTNI 177
           ++ I+   + LDFY LG+G  H I+A +G G+ + LE  L   LP+ +    + +     
Sbjct: 120 TDGIDPEAAVLDFYALGLGEIHAIAASHGRGVNSLLETAL---LPWMEEIVPEVELTEEE 176

Query: 178 HSIEY--------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
            +  Y                          IK+AIVG+PNVGKSTL N +LGE+RV+ +
Sbjct: 177 ENAAYWADLEEETEKALEEEEEEDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVF 236

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E ++++Y+LIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDDREYVLIDTAGVRKRGKITETVEKFSVIKTLQAIEDANVVMLV 296

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA+  IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +
Sbjct: 297 IDARAGISDQDLSLLGFILNSGRSLVIVVNKWDGMTQEARDEVKEMLDFRLGFIDFARIH 356

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  ES+   YD S   + T+ +TR +  A  +H P   +  R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESVTEAYDCSTKRVGTAMLTRIMTMAADDHQPPLVRGRRVKLKYAH 416

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++K + + YKRYL  YF R+ +++
Sbjct: 417 AGGYNPPIVVIHGNQVKDLADSYKRYLMNYFRRSLNVM 454


>gi|444426825|ref|ZP_21222229.1| GTP-binding protein Der [Vibrio campbellii CAIM 519 = NBRC 15631]
 gi|444239923|gb|ELU51476.1| GTP-binding protein Der [Vibrio campbellii CAIM 519 = NBRC 15631]
          Length = 498

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/458 (43%), Positives = 298/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L                   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESGEGEIED 179

Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                  EL  + + ++    EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAVEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+V+HGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYLMNYFRKSLEIM 456


>gi|350530365|ref|ZP_08909306.1| GTP-binding protein Der [Vibrio rotiferianus DAT722]
          Length = 498

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/458 (43%), Positives = 298/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L                   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179

Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                  EL  + + ++    EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAIEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+V+HGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYLMNYFRKSLEIM 456


>gi|121635020|ref|YP_975265.1| hypothetical protein NMC1245 [Neisseria meningitidis FAM18]
 gi|254805109|ref|YP_003083330.1| hypothetical protein NMO_1149 [Neisseria meningitidis alpha14]
 gi|385340216|ref|YP_005894088.1| radical SAM enzyme, Cfr family [Neisseria meningitidis G2136]
 gi|416177921|ref|ZP_11610290.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M6190]
 gi|416191949|ref|ZP_11616330.1| radical SAM enzyme, Cfr family [Neisseria meningitidis ES14902]
 gi|416203929|ref|ZP_11620162.1| radical SAM enzyme, Cfr family [Neisseria meningitidis 961-5945]
 gi|421538259|ref|ZP_15984436.1| 23S rRNA methyltransferase [Neisseria meningitidis 93003]
 gi|421544602|ref|ZP_15990678.1| 23S rRNA methyltransferase [Neisseria meningitidis NM140]
 gi|421546717|ref|ZP_15992762.1| 23S rRNA methyltransferase [Neisseria meningitidis NM183]
 gi|421548969|ref|ZP_15994993.1| 23S rRNA methyltransferase [Neisseria meningitidis NM2781]
 gi|421552920|ref|ZP_15998892.1| 23S rRNA methyltransferase [Neisseria meningitidis NM576]
 gi|433467457|ref|ZP_20424911.1| 23S rRNA methyltransferase [Neisseria meningitidis 87255]
 gi|433492708|ref|ZP_20449801.1| 23S rRNA methyltransferase [Neisseria meningitidis NM586]
 gi|433494842|ref|ZP_20451910.1| 23S rRNA methyltransferase [Neisseria meningitidis NM762]
 gi|433497009|ref|ZP_20454047.1| 23S rRNA methyltransferase [Neisseria meningitidis M7089]
 gi|433499071|ref|ZP_20456080.1| 23S rRNA methyltransferase [Neisseria meningitidis M7124]
 gi|433501047|ref|ZP_20458033.1| 23S rRNA methyltransferase [Neisseria meningitidis NM174]
 gi|433503188|ref|ZP_20460149.1| 23S rRNA methyltransferase [Neisseria meningitidis NM126]
 gi|205829823|sp|A1KUD6.1|RLMN_NEIMF RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|120866726|emb|CAM10479.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
 gi|254668651|emb|CBA06309.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|325132491|gb|EGC55184.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M6190]
 gi|325138265|gb|EGC60834.1| radical SAM enzyme, Cfr family [Neisseria meningitidis ES14902]
 gi|325142519|gb|EGC64920.1| radical SAM enzyme, Cfr family [Neisseria meningitidis 961-5945]
 gi|325198460|gb|ADY93916.1| radical SAM enzyme, Cfr family [Neisseria meningitidis G2136]
 gi|402317078|gb|EJU52617.1| 23S rRNA methyltransferase [Neisseria meningitidis 93003]
 gi|402322962|gb|EJU58412.1| 23S rRNA methyltransferase [Neisseria meningitidis NM183]
 gi|402323793|gb|EJU59235.1| 23S rRNA methyltransferase [Neisseria meningitidis NM140]
 gi|402325648|gb|EJU61057.1| 23S rRNA methyltransferase [Neisseria meningitidis NM2781]
 gi|402330099|gb|EJU65448.1| 23S rRNA methyltransferase [Neisseria meningitidis NM576]
 gi|432202291|gb|ELK58355.1| 23S rRNA methyltransferase [Neisseria meningitidis 87255]
 gi|432228494|gb|ELK84194.1| 23S rRNA methyltransferase [Neisseria meningitidis NM586]
 gi|432230045|gb|ELK85724.1| 23S rRNA methyltransferase [Neisseria meningitidis NM762]
 gi|432233502|gb|ELK89129.1| 23S rRNA methyltransferase [Neisseria meningitidis M7089]
 gi|432234905|gb|ELK90525.1| 23S rRNA methyltransferase [Neisseria meningitidis M7124]
 gi|432236338|gb|ELK91947.1| 23S rRNA methyltransferase [Neisseria meningitidis NM174]
 gi|432239953|gb|ELK95497.1| 23S rRNA methyltransferase [Neisseria meningitidis NM126]
          Length = 364

 Score =  397 bits (1020), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +FN+MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|383189018|ref|YP_005199146.1| ribosome-associated GTPase EngA [Rahnella aquatilis CIP 78.65 =
           ATCC 33071]
 gi|371587276|gb|AEX51006.1| ribosome-associated GTPase EngA [Rahnella aquatilis CIP 78.65 =
           ATCC 33071]
          Length = 494

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/457 (44%), Positives = 291/457 (63%), Gaps = 32/457 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I    FII+DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTKTRDALVADFPGLTRDRKYGRAEIEGNEFIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M  Q+  AI E+DI++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSREKATFLVANK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
           ++ ++  S + DFY LG+G+ + I+A +G G+   +E++L   +P+              
Sbjct: 120 TDGLDPDSATGDFYSLGLGDVYAIAASHGRGVTQLIEHVL---IPFIGEKPEEVELTEEE 176

Query: 166 --KKFFKKKEFTNIHSIE-----------YIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
               ++ ++E T     E            IK+AIVG+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 ANAAYWAEQEATGDEIPEDEEDNFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD 236

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI      ++++YILIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMNRDDREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVMLVI 296

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++ IS QD+++  FI  SGRSL++ VNKWD +    R  +K+ +  +L F+ FA  +F
Sbjct: 297 DAREGISDQDLSLLGFILNSGRSLVIVVNKWDGMSEEARAQVKDQLDLRLGFVDFARIHF 356

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+  + + +  ES+N  Y  +   +STS +TR +  A  +H P      R KL+YAH 
Sbjct: 357 ISALHGSGVGNLFESVNEAYTCATTRVSTSLLTRIMQMAADDHQPPLVNGRRVKLKYAHA 416

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN++K + + YKRYL  YF R+  ++
Sbjct: 417 GGYNPPIVVIHGNQVKDLADSYKRYLMNYFRRSLKVM 453


>gi|340782115|ref|YP_004748722.1| GTP-binding protein EngA [Acidithiobacillus caldus SM-1]
 gi|340556268|gb|AEK58022.1| GTP-binding protein EngA [Acidithiobacillus caldus SM-1]
          Length = 447

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/429 (44%), Positives = 280/429 (65%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKSTLFNRLT SR+ALVA+ PGLTRDRHYG    G + F++IDTGGF
Sbjct: 1   MAAVIALVGRPNVGKSTLFNRLTRSREALVADLPGLTRDRHYGVAQHGTQRFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EPE ++G++  M  QT+QAI E+D + F+VD ++GL  QD+ I   LR+SG+ + LV+NK
Sbjct: 61  EPEEREGLVAAMAAQTRQAIAEADAVCFLVDAKEGLSAQDEEIAAELRRSGKTVYLVVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +   +   L +F+ LG+G P+ I+A +G+G++  L+ I      +      +E     S
Sbjct: 121 MDVRGAVAELPEFHRLGLGMPYTIAASHGHGVETLLDAI------FADLAVPEEAAAELS 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +   ++A++G+PNVGKSTL+N++LGE RVI YD PGTTRDSI+  +E   + Y++IDTAG
Sbjct: 175 LSGPRIAVLGRPNVGKSTLVNAMLGEQRVIVYDAPGTTRDSIRIPYERAGRPYVMIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR +  E +EK SV+KTL ++ EA+VV++LLDA+  ++ QD ++     E  R +I+ 
Sbjct: 235 IRRRARVGEGLEKLSVLKTLAALKEADVVLMLLDARDGVTDQDAHLVGVAAELWRPMILL 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    R++ K  +++ L FLS+A    ISA+  + +     SI+ ++  +  H 
Sbjct: 295 LNKWDGLDARARQMAKAALERHLGFLSYAPVYTISALHGSGVGDLYPSIDRLWRDARRHF 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ + R L   I++H P      R KLRY HQGG+NP  +V HGN+L  +   YKRYLE
Sbjct: 355 STAELNRVLAQIIESHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQLNRLPGAYKRYLE 414

Query: 420 KYFYRTFSL 428
             F +   L
Sbjct: 415 SAFRKALGL 423


>gi|221066031|ref|ZP_03542136.1| radical SAM enzyme, Cfr family [Comamonas testosteroni KF-1]
 gi|220711054|gb|EED66422.1| radical SAM enzyme, Cfr family [Comamonas testosteroni KF-1]
          Length = 373

 Score =  397 bits (1020), Expect = e-107,   Method: Composition-based stats.
 Identities = 186/340 (54%), Positives = 247/340 (72%), Gaps = 7/340 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF++MTDL+ SLR+KLK+  +I A  ++++ +S DGT 
Sbjct: 19  QLGEKRFRATQLFRWIHQRGASDFDQMTDLAKSLREKLKSRAHITALPVVTEHVSADGTV 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E+VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL  GEI+ QL
Sbjct: 79  KWLFDVGDGNAVESVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLDTGEILAQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR+    +      R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR 
Sbjct: 139 WYAEHSLRKRFGTE-----DRIISNVVMMGMGEPLQNYSALVPALRVMLDDHGYGLSRRR 193

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PM+D+L+Q+C V LAVSLHA N+ LR+ LVP+++KYP+ EL+ AC RY+ +
Sbjct: 194 VTVSTSGVVPMMDRLSQDCAVALAVSLHAPNDPLRDNLVPLNRKYPIAELLDACERYLEF 253

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTS-CKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R      S CK NLIPFN FP S L+ S  
Sbjct: 254 APRDFITFEYCMLDGVNDQPEHARQLIELVRARGDGKSWCKFNLIPFNPFPASGLLRSSA 313

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +R+  FA +L N+GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 314 ARVTEFATMLSNAGIVTTVRKTRGDDIDAACGQLAGDVKD 353


>gi|163802477|ref|ZP_02196370.1| GTP-binding protein EngA [Vibrio sp. AND4]
 gi|159173778|gb|EDP58593.1| GTP-binding protein EngA [Vibrio sp. AND4]
          Length = 498

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/458 (43%), Positives = 298/458 (65%), Gaps = 31/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQASLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
           K + I++  +  DF++LG+ + + I+A +G G+   LE  L                   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYHIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179

Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                  EL  + + ++    EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTGFEDEELAIEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+V+HGN ++ + + YKRYL  YF ++  ++
Sbjct: 419 AGGYNPPIVVVHGNMVRELPDSYKRYLMNYFRKSLEIM 456


>gi|419365946|ref|ZP_13907107.1| small GTP-binding domain protein [Escherichia coli DEC13E]
 gi|378212255|gb|EHX72578.1| small GTP-binding domain protein [Escherichia coli DEC13E]
          Length = 487

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/451 (44%), Positives = 293/451 (64%), Gaps = 30/451 (6%)

Query: 4   VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
           ++ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG +  
Sbjct: 1   MVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGID-G 59

Query: 64  VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
            + G+   M +Q+  AI E+D+++F+VD R GL+  D+ I   LR   +P  LV NK++ 
Sbjct: 60  TEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDG 119

Query: 124 INSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
           ++   ++ DFY LG+G  + I+A +G G+ + LE++L   LP+ +    +E  +    EY
Sbjct: 120 LDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-EDAEY 175

Query: 183 ------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTR 218
                                   IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTR
Sbjct: 176 WAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTR 235

Query: 219 DSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
           DSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++DA++ I
Sbjct: 236 DSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGI 295

Query: 279 SAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKL 338
           S QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +FISA+  
Sbjct: 296 SDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKEMLDFRLGFIDFARVHFISALHG 355

Query: 339 NNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPP 398
           + + +  ES+   YDSS   + TS +TR +  A+++H P   +  R KL+YAH GG NPP
Sbjct: 356 SGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPP 415

Query: 399 IIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           I+VIHGN++K + + YKRYL  YF ++  ++
Sbjct: 416 IVVIHGNQVKDLPDSYKRYLMNYFRKSLDVM 446


>gi|261856783|ref|YP_003264066.1| ribosome-associated GTPase EngA [Halothiobacillus neapolitanus c2]
 gi|261837252|gb|ACX97019.1| ribosome-associated GTPase EngA [Halothiobacillus neapolitanus c2]
          Length = 567

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/430 (46%), Positives = 283/430 (65%), Gaps = 5/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFN++T SR ALVA+Y GLTRDR YG      + FI+IDTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTLFNQMTRSRAALVADYAGLTRDRQYGSAEHEGRDFIVIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E + GI   M  Q   AI E+D ++F+VD R GL   D+ I   LR+S +PI LV+NK
Sbjct: 61  TGE-RGGIEALMQDQAWAAIEEADCVVFMVDARAGLTVADQEIAEKLRRSSKPIQLVVNK 119

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + ++ S +  +F  LG+G P   +A +G GI    + +L + L  K     +E    + 
Sbjct: 120 VDGVDESLVQAEFARLGLGEPVFTTASHGRGISTLWDAVL-VRLADKLAVMDEEPE--YD 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I+VA++G+PNVGKSTL N LLGE+RV+ +D PGTTRDSI   FE N K Y LIDTAG
Sbjct: 177 EKTIRVALIGRPNVGKSTLTNRLLGEDRVLAFDQPGTTRDSIYIPFEQNGKAYTLIDTAG 236

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  E+IEKFS++KTL++I  ANVVIL+ DA + IS QD ++  FI++ GR+L++ 
Sbjct: 237 VRRRARVNEMIEKFSIVKTLQAIEAANVVILVCDAHEGISEQDQHLLGFIHDRGRALVIA 296

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++    R  +K  I  +L+F+++A  +FISA+    +    ES++  Y +++  +
Sbjct: 297 INKWDNLTDYARAEVKRQIDLRLDFINYAEMHFISALHGTGVGHLFESVDKAYLAAMRDI 356

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ +TR+L +A+  H P      R KLRYAHQGG NPPIIVIHG +   +  +Y RYLE
Sbjct: 357 STNVLTRSLEAAVFAHQPPLIHGRRIKLRYAHQGGSNPPIIVIHGKQTDRLPGNYSRYLE 416

Query: 420 KYFYRTFSLI 429
            +F + F L+
Sbjct: 417 GWFRKEFQLM 426


>gi|408372882|ref|ZP_11170581.1| GTP-binding protein [Alcanivorax hongdengensis A-11-3]
 gi|407767234|gb|EKF75672.1| GTP-binding protein [Alcanivorax hongdengensis A-11-3]
          Length = 466

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/439 (42%), Positives = 286/439 (65%), Gaps = 24/439 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+G +G   + ++DTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGDGRLGDYPYTVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E + GI   MT Q+  A  E+D+I+F+VDGR GL   D+ I + LRK  +P  LV+NK
Sbjct: 61  G-ESEDGIDAPMTSQSLLAAGEADVILFMVDGRAGLTAADEQIASELRKLPKPTYLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +++  ++ +FY LG+ +   I+A +G G+++ +E ++            + F ++  
Sbjct: 120 TDGVDADAAMAEFYALGLTDVMPIAAAHGRGVRSMIETVM------------EGFPDLQP 167

Query: 180 IEY----------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
           ++           I++A++G+PNVGKSTL+N +LGE+RV+ +D  GTTRD+I+  FE + 
Sbjct: 168 LDDDQPQEDDEGRIRIAVLGRPNVGKSTLVNRMLGEDRVVVFDHAGTTRDAIEVPFERDG 227

Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
           K Y LIDTAG+RRR K FE++EKFSVIK L+++  A VV+L++DA++ I+ QD+++  +I
Sbjct: 228 KPYTLIDTAGVRRRGKVFEMVEKFSVIKALQAMEAAQVVVLVIDAREGITDQDLHLLGYI 287

Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
            +SGR+L++ VNKWD +  + ++ ++  + ++L F  +    FISA+    +      + 
Sbjct: 288 LDSGRALMIAVNKWDGLEADHKERVRAEMGRRLEFAPWVKIKFISALHGTGVGDLWAMVE 347

Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
             +DS+ I +S++ +TR + +    HPP R    R KLRYAH GG NPP IV+HGNR   
Sbjct: 348 KAWDSAFIRVSSNEMTRIMEAICAGHPPPRNGRFRAKLRYAHLGGNNPPTIVLHGNRTDS 407

Query: 410 IGNDYKRYLEKYFYRTFSL 428
           +   YKRYLE  F     L
Sbjct: 408 LPASYKRYLENRFREMLKL 426


>gi|301632619|ref|XP_002945379.1| PREDICTED: hypothetical protein LOC100487340 [Xenopus (Silurana)
           tropicalis]
          Length = 937

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/379 (49%), Positives = 265/379 (69%), Gaps = 5/379 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G  GK ++I+IDTGGF
Sbjct: 8   MKPVIALVGRPNVGKSTLFNRLTRSRDAIVADFAGLTRDRHYGNGRQGKHAYIVIDTGGF 67

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EP+   GI  EM KQT+QA+ ESD+++F+VD R G+  QD  I+N+LR+ G+P +LV NK
Sbjct: 68  EPDASSGIFREMAKQTRQAVAESDVVLFVVDARAGVSAQDHGISNYLRRLGKPCLLVANK 127

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
           +E + S   L +FYELG+G  + +SA +G G++  +E  L  + LP       +    + 
Sbjct: 128 AEGMQSGAQLSEFYELGLGEVYPVSAAHGQGVRGLVERALEPLNLPDPDAGAAELQEGLG 187

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +   K+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I   FE   +K+ LIDTA
Sbjct: 188 PV---KLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERQGQKFELIDTA 244

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ + FE IEKFSV+KTL++I  ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 245 GLRRKGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVI 304

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD++   QR+++  +I+ +L+FL FA  +FISA K   +     SI   + ++   
Sbjct: 305 AVNKWDAVDDYQRQMLGRSIEARLSFLKFANLHFISAQKRQGLGPLWTSIMQAHKAAGCK 364

Query: 359 LSTSRITRALISAIKNHPP 377
           + T  +TR L+ +++   P
Sbjct: 365 MPTPILTRLLLESVQFQTP 383



 Score = 43.9 bits (102), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 7   LVGRPNVGKSTLFNRLTNSR----DALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           LVG  N GKSTLFN L  +R    D L A     TR  +  +     +S  + DT GF  
Sbjct: 751 LVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLQD---AGRSVSLSDTVGFIR 807

Query: 63  EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQG----LVEQDKLITNFLRKSGQPIVLVI 118
           ++  G++ +  + T Q  +++D+++ +VD         ++Q + +   +     P +LV 
Sbjct: 808 DLPHGLV-DAFQATLQEAVDADLLLHVVDAANPHFPEQIQQVQTVLADIDAVDIPQLLVF 866

Query: 119 NKSENI---NSSISL-DFYEL-GIGNPHI-ISALYGNGIKNFLENI 158
           NK + +     S+ L D YE+ G   P + +SA  G G++   + +
Sbjct: 867 NKLDALAPEQRSLQLQDSYEMDGRPVPRVFLSARTGEGLQALRQQL 912


>gi|365093283|ref|ZP_09330349.1| radical SAM protein [Acidovorax sp. NO-1]
 gi|363414457|gb|EHL21606.1| radical SAM protein [Acidovorax sp. NO-1]
          Length = 373

 Score =  397 bits (1019), Expect = e-107,   Method: Composition-based stats.
 Identities = 185/341 (54%), Positives = 249/341 (73%), Gaps = 7/341 (2%)

Query: 534 HELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGT 593
            +LGE  FRA QL +WIH+ G SDF+ M+DL+ +LR KLK    ++A  ++S+ +S DGT
Sbjct: 18  QQLGEKRFRATQLFRWIHQRGASDFDAMSDLAKALRDKLKGCARVEALPVISEHVSTDGT 77

Query: 594 RKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQ 652
            KW+F V   N +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNLT GEI+ Q
Sbjct: 78  VKWLFDVGDGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLTTGEIVAQ 137

Query: 653 LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
           LW  E  LR+    ++ S G R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR
Sbjct: 138 LWFAEHSLRQ----RLQS-GDRVISNVVMMGMGEPLQNYSALVPALRVMLDDHGYGLSRR 192

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V +STSG++PM+D+LA +CPV LAVSLHA N+ LR+ LVP+++KYP++EL+ AC+RY+ 
Sbjct: 193 RVTVSTSGVVPMMDRLALDCPVALAVSLHAPNDPLRDNLVPLNRKYPIEELMAACNRYLA 252

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNK-ILTSCKINLIPFNCFPNSNLICSK 831
           ++PR  ITFEYCML G+ND   HA +LI L++  +     CK NLIPFN FP S L+ S 
Sbjct: 253 HAPRDFITFEYCMLDGVNDQVEHARQLIELVKPARGAGVRCKFNLIPFNPFPASGLLRSP 312

Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +++  FAK+L  +GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 313 QNQVLAFAKVLSEAGIVTTVRKTRGDDIDAACGQLAGDVKD 353


>gi|329897033|ref|ZP_08271805.1| GTP-binding protein EngA [gamma proteobacterium IMCC3088]
 gi|328921473|gb|EGG28859.1| GTP-binding protein EngA [gamma proteobacterium IMCC3088]
          Length = 463

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/429 (45%), Positives = 285/429 (66%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN+LT SRDALVA++ GLTRDR YGEG +G++ +++IDTGG 
Sbjct: 1   MKPVIALMGRPNVGKSTLFNQLTRSRDALVADFSGLTRDRKYGEGKVGERPYVVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI   M +Q+  A  E+DI++ I+D R GL   D+ + + LR+   P  +V+NK
Sbjct: 61  TGD-ENGIDLPMAQQSMAAADEADIVLLILDARAGLTGVDQELVSLLRRQSIPFHVVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +NS  ++ DFY LGI   + I+A +  G+++ +E +L         F + E T    
Sbjct: 120 IDGMNSDTAMGDFYSLGIDPLYRIAASHNRGVRSMIEEVLAP-------FPEDEITAEEQ 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IKVAIVG+PNVGKSTL+N +LGE RV+ YD PGTTRDS+   FE   ++Y LIDTAG
Sbjct: 173 AHGIKVAIVGRPNVGKSTLVNRMLGEERVVVYDHPGTTRDSVYIDFEREGEQYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E +EKFS++KTLK+I ++NVV+LL+DA + I  QD+++     E+GR+L+V 
Sbjct: 233 VRRRKNVKESVEKFSIVKTLKAIDDSNVVLLLMDAHEGIVDQDMHLLGHCIEAGRALVVV 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   Q+  IK++I ++L F+ FA  +FISA+  + +    ++I+  Y ++   L
Sbjct: 293 VNKWDGLDDYQKDRIKDSISRRLKFVEFAQMHFISALHGSGVGHLYQAIHTAYLAATQKL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ +TR L  A+ +HPP      R KLRYAH GG+NPP IV+HGN+   +   Y+RYLE
Sbjct: 353 STNYLTRILEGAVSDHPPPMVNGRRIKLRYAHAGGQNPPRIVVHGNQTTKVPASYERYLE 412

Query: 420 KYFYRTFSL 428
             + R   +
Sbjct: 413 NVYRRELGI 421


>gi|54294416|ref|YP_126831.1| GTP-binding protein EngA [Legionella pneumophila str. Lens]
 gi|81822385|sp|Q5WWG8.1|DER_LEGPL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|53754248|emb|CAH15725.1| hypothetical protein lpl1485 [Legionella pneumophila str. Lens]
          Length = 462

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/436 (49%), Positives = 292/436 (66%), Gaps = 22/436 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG      KSFII+DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60

Query: 61  E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
              +++   +  M+KQ++ A+ E+++I+F+VDGR GL   D+ I   LRK  + + LV+N
Sbjct: 61  GVDDIEVDTL--MSKQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K++ IN  I+  DF  LGI + H ISA +G GI + LE IL    P+         T +H
Sbjct: 119 KTDGINEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PF--------ITEMH 167

Query: 179 SI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
                + IK+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F   +K+Y+LI
Sbjct: 168 EATDDKAIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLI 227

Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
           DTAG+RR+++  E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+  FI ESG++
Sbjct: 228 DTAGVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKA 287

Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
           L++ VNKWD +    ++ IK+ + ++L+F +FA   FISA+  + +    + IN  Y S+
Sbjct: 288 LVIAVNKWDGLEEEHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSA 347

Query: 356 IIHLSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
           I   ST ++TR L  ISA K+ PPC     R KLRYAH GG NPP+IVIHGN+L  +   
Sbjct: 348 IQSFSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPES 405

Query: 414 YKRYLEKYFYRTFSLI 429
           YKRYL   F +   L+
Sbjct: 406 YKRYLNNEFIKHLGLV 421


>gi|161870181|ref|YP_001599351.1| hypothetical protein NMCC_1221 [Neisseria meningitidis 053442]
 gi|205829821|sp|A9LZN6.1|RLMN_NEIM0 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|161595734|gb|ABX73394.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 364

 Score =  397 bits (1019), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           + GE PFRAKQ+ +W+H+ G  +FN+MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DTGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQASIEIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDRAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|238753871|ref|ZP_04615231.1| GTP-binding protein engA [Yersinia ruckeri ATCC 29473]
 gi|238707859|gb|EEQ00217.1| GTP-binding protein engA [Yersinia ruckeri ATCC 29473]
          Length = 496

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/457 (44%), Positives = 286/457 (62%), Gaps = 29/457 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG   +    FI+IDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVEGHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M  Q+  AI E+DI++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSRQKATFLVANK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENI-------------LTIELPYK 166
           ++ +   + + DFY LG+G  H I+A +G G+   +E +             LT E    
Sbjct: 120 TDGMEPEAAAADFYSLGMGEVHPIAASHGRGVAQLIEEVMAPYMEPEAPEVELTEEEANA 179

Query: 167 KFFKKKEFTNIHSIEY--------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
            ++  +E       EY              IK+AIVG+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 AYWAAQEAEGQDPAEYEDPEEDDFDPRSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD 239

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI      + ++YILIDTAG+R+R K  E +EKFSVIKTL++I ++NVV+L++
Sbjct: 240 MPGTTRDSIYIPMIRDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDSNVVLLVI 299

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA+  IS QD+++  FI  SGRSL++ VNKWD +    R  +K+ ++ +L F+ FA  +F
Sbjct: 300 DARDGISDQDLSLLGFILNSGRSLVIAVNKWDGMTEEARTQVKDMLELRLGFVDFARIHF 359

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+  + + +  ESI   YD S   + TS +TR +  A ++H P   +  R KL+YAH 
Sbjct: 360 ISALHGSGVGNLFESILEAYDCSTKRVGTSMLTRIMQMAEEDHQPPLVRGRRVKLKYAHA 419

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN++  + + YKRYL  YF R+  ++
Sbjct: 420 GGYNPPIVVIHGNQVTDLADSYKRYLMNYFRRSLKVM 456


>gi|218768330|ref|YP_002342842.1| hypothetical protein NMA1522 [Neisseria meningitidis Z2491]
 gi|385324024|ref|YP_005878463.1| hypothetical protein NMV_1088 [Neisseria meningitidis 8013]
 gi|385338161|ref|YP_005892034.1| hypothetical protein NMAA_1039 [Neisseria meningitidis WUE 2594]
 gi|416182800|ref|ZP_11612236.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M13399]
 gi|421550805|ref|ZP_15996806.1| 23S rRNA methyltransferase [Neisseria meningitidis 69166]
 gi|433471445|ref|ZP_20428831.1| 23S rRNA methyltransferase [Neisseria meningitidis 68094]
 gi|433475156|ref|ZP_20432497.1| 23S rRNA methyltransferase [Neisseria meningitidis 88050]
 gi|433477755|ref|ZP_20435075.1| 23S rRNA methyltransferase [Neisseria meningitidis 70012]
 gi|433479825|ref|ZP_20437115.1| 23S rRNA methyltransferase [Neisseria meningitidis 63041]
 gi|433513632|ref|ZP_20470422.1| 23S rRNA methyltransferase [Neisseria meningitidis 63049]
 gi|433515920|ref|ZP_20472688.1| 23S rRNA methyltransferase [Neisseria meningitidis 2004090]
 gi|433517705|ref|ZP_20474451.1| 23S rRNA methyltransferase [Neisseria meningitidis 96023]
 gi|433520087|ref|ZP_20476807.1| 23S rRNA methyltransferase [Neisseria meningitidis 65014]
 gi|433522022|ref|ZP_20478713.1| 23S rRNA methyltransferase [Neisseria meningitidis 61103]
 gi|433524326|ref|ZP_20480987.1| 23S rRNA methyltransferase [Neisseria meningitidis 97020]
 gi|433526413|ref|ZP_20483043.1| 23S rRNA methyltransferase [Neisseria meningitidis 69096]
 gi|433528380|ref|ZP_20484989.1| 23S rRNA methyltransferase [Neisseria meningitidis NM3652]
 gi|433530581|ref|ZP_20487170.1| 23S rRNA methyltransferase [Neisseria meningitidis NM3642]
 gi|433532850|ref|ZP_20489413.1| 23S rRNA methyltransferase [Neisseria meningitidis 2007056]
 gi|433534647|ref|ZP_20491187.1| 23S rRNA methyltransferase [Neisseria meningitidis 2001212]
 gi|433539090|ref|ZP_20495566.1| 23S rRNA methyltransferase [Neisseria meningitidis 70030]
 gi|433541165|ref|ZP_20497617.1| 23S rRNA methyltransferase [Neisseria meningitidis 63006]
 gi|205829822|sp|A1ISB3.1|RLMN_NEIMA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|121052338|emb|CAM08669.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
 gi|261392411|emb|CAX49953.1| conserved hypothetical protein [Neisseria meningitidis 8013]
 gi|319410575|emb|CBY90944.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
 gi|325134450|gb|EGC57095.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M13399]
 gi|402329342|gb|EJU64703.1| 23S rRNA methyltransferase [Neisseria meningitidis 69166]
 gi|432208297|gb|ELK64275.1| 23S rRNA methyltransferase [Neisseria meningitidis 68094]
 gi|432210974|gb|ELK66929.1| 23S rRNA methyltransferase [Neisseria meningitidis 88050]
 gi|432215420|gb|ELK71309.1| 23S rRNA methyltransferase [Neisseria meningitidis 70012]
 gi|432216164|gb|ELK72046.1| 23S rRNA methyltransferase [Neisseria meningitidis 63041]
 gi|432247164|gb|ELL02603.1| 23S rRNA methyltransferase [Neisseria meningitidis 63049]
 gi|432252846|gb|ELL08196.1| 23S rRNA methyltransferase [Neisseria meningitidis 2004090]
 gi|432253441|gb|ELL08785.1| 23S rRNA methyltransferase [Neisseria meningitidis 96023]
 gi|432254809|gb|ELL10143.1| 23S rRNA methyltransferase [Neisseria meningitidis 65014]
 gi|432259570|gb|ELL14841.1| 23S rRNA methyltransferase [Neisseria meningitidis 97020]
 gi|432259839|gb|ELL15109.1| 23S rRNA methyltransferase [Neisseria meningitidis 61103]
 gi|432261177|gb|ELL16434.1| 23S rRNA methyltransferase [Neisseria meningitidis 69096]
 gi|432265181|gb|ELL20377.1| 23S rRNA methyltransferase [Neisseria meningitidis NM3652]
 gi|432266673|gb|ELL21855.1| 23S rRNA methyltransferase [Neisseria meningitidis 2007056]
 gi|432267088|gb|ELL22269.1| 23S rRNA methyltransferase [Neisseria meningitidis NM3642]
 gi|432271389|gb|ELL26514.1| 23S rRNA methyltransferase [Neisseria meningitidis 2001212]
 gi|432273452|gb|ELL28550.1| 23S rRNA methyltransferase [Neisseria meningitidis 70030]
 gi|432277178|gb|ELL32227.1| 23S rRNA methyltransferase [Neisseria meningitidis 63006]
          Length = 364

 Score =  396 bits (1018), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +FN+MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L+        CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVTD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|416213193|ref|ZP_11622177.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M01-240013]
 gi|421542612|ref|ZP_15988719.1| 23S rRNA methyltransferase [Neisseria meningitidis NM255]
 gi|421554912|ref|ZP_16000851.1| 23S rRNA methyltransferase [Neisseria meningitidis 98008]
 gi|254673132|emb|CBA07913.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
 gi|325144551|gb|EGC66850.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M01-240013]
 gi|402317442|gb|EJU52980.1| 23S rRNA methyltransferase [Neisseria meningitidis NM255]
 gi|402332065|gb|EJU67396.1| 23S rRNA methyltransferase [Neisseria meningitidis 98008]
          Length = 364

 Score =  396 bits (1018), Expect = e-107,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +FN+MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG+IP +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMIPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L+        CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVTD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|421565597|ref|ZP_16011370.1| 23S rRNA methyltransferase [Neisseria meningitidis NM3081]
 gi|433536930|ref|ZP_20493435.1| 23S rRNA methyltransferase [Neisseria meningitidis 77221]
 gi|402344032|gb|EJU79174.1| 23S rRNA methyltransferase [Neisseria meningitidis NM3081]
 gi|432273866|gb|ELL28963.1| 23S rRNA methyltransferase [Neisseria meningitidis 77221]
          Length = 364

 Score =  396 bits (1018), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +FN+MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTSAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|433656890|ref|YP_007274269.1| GTP-binding protein EngA [Vibrio parahaemolyticus BB22OP]
 gi|432507578|gb|AGB09095.1| GTP-binding protein EngA [Vibrio parahaemolyticus BB22OP]
          Length = 498

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/457 (43%), Positives = 298/457 (65%), Gaps = 29/457 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  + ++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTSADEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
           K + I++  +  DF++LG+ + + I+A +G G+   LE        ++LT E    +   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLTSESEEGEIED 179

Query: 171 KKEF--TNIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
             EF   +I   EY                IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDADIAPDEYTEEEAEAEFQRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++Y++IDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHF 359

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH 
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAHA 419

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN ++ + + YKRYL  YF ++  ++
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYLMNYFRKSLEIM 456


>gi|410694045|ref|YP_003624667.1| putative radical SAM enzyme, Cfr family, yfgB [Thiomonas sp. 3As]
 gi|294340470|emb|CAZ88851.1| putative radical SAM enzyme, Cfr family, yfgB [Thiomonas sp. 3As]
          Length = 379

 Score =  396 bits (1018), Expect = e-107,   Method: Composition-based stats.
 Identities = 182/341 (53%), Positives = 249/341 (73%), Gaps = 6/341 (1%)

Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
           G   FRA+Q+ +W+H+ GV+DF  M+DL+  LR+ L+   +I A  ++S+Q S DGT KW
Sbjct: 26  GHAAFRARQVFRWMHQKGVADFEAMSDLAKPLRQFLREHAHIAALPVLSEQRSADGTVKW 85

Query: 597 IFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
           +F V + N +E VFIPE  RNTLC+S+Q GCA+NC FCSTG QGF RNL   EI+ QLW 
Sbjct: 86  LFDVGQGNAVEAVFIPEAQRNTLCVSSQAGCAVNCKFCSTGHQGFSRNLQTWEILAQLWH 145

Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
            EF +RRE  +     G+R I+N+VMMGMGEPL NY + + AL+ +L D  YGLSRR V 
Sbjct: 146 AEFTMRRELGL---PGGERAISNVVMMGMGEPLQNYSALVPALRTMLDDDGYGLSRRRVT 202

Query: 716 LSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSP 775
           +STSG++PMID+L+Q+CPV LAVSLHA  + LR++LVP+++KYPL EL+ AC RY+ ++P
Sbjct: 203 VSTSGVVPMIDRLSQDCPVALAVSLHAPVDALRDELVPLNRKYPLHELLAACKRYLDFAP 262

Query: 776 RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRI 835
           R  ITFEYCML G+NDT   A +L+ L+R  ++  +CK NLIPFN FP S L  S  +R+
Sbjct: 263 RDFITFEYCMLDGVNDTPALAQDLVRLVRAAQV--NCKFNLIPFNPFPQSGLKRSSAARV 320

Query: 836 KIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
             FA++L+++G+  T+RK RG+DI+AACGQL+GE  D  ++
Sbjct: 321 AAFAQVLLDAGLVTTVRKTRGDDIDAACGQLAGEVQDRTRR 361


>gi|337279529|ref|YP_004619001.1| hypothetical protein Rta_18910 [Ramlibacter tataouinensis TTB310]
 gi|334730606|gb|AEG92982.1| conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
          Length = 385

 Score =  396 bits (1018), Expect = e-107,   Method: Composition-based stats.
 Identities = 186/339 (54%), Positives = 245/339 (72%), Gaps = 7/339 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G ++F++M+DL+ SLR+KLK +  ++   I++   S DGT K
Sbjct: 21  LGEKRFRATQLFRWIHQRGCAEFDQMSDLAKSLREKLKYAARVQGLAIITQHESADGTIK 80

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V + N +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEI+ QLW
Sbjct: 81  WLFDVGQGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFARNLSTGEIVAQLW 140

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LRR          +R I+N+VMMGMGEPL NY + + AL+ +L DH YGLSRR V
Sbjct: 141 FAEHYLRRHL-----GTSERVISNVVMMGMGEPLQNYSALVPALRTMLDDHGYGLSRRRV 195

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PMID+L Q+CPV LAVSLHA N+ LR+ LVP+++KYPL EL+ AC+RY+ ++
Sbjct: 196 TVSTSGVVPMIDRLGQDCPVALAVSLHAPNDELRDHLVPLNRKYPLAELLDACNRYLEHA 255

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL-TSCKINLIPFNCFPNSNLICSKNS 833
           PR  ITFEYCML G+ND   HA +LI L+R +     SCK+NLIPFN FP S L  S N 
Sbjct: 256 PRDFITFEYCMLDGVNDQPEHAQQLIELVRGHAGRGVSCKLNLIPFNPFPQSGLTRSPNK 315

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +  FA+ L+N+GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 316 AVSAFAEKLINAGIVTTVRKTRGDDIDAACGQLAGDVRD 354


>gi|416161426|ref|ZP_11606391.1| radical SAM enzyme, Cfr family [Neisseria meningitidis N1568]
 gi|421557411|ref|ZP_16003316.1| 23S rRNA methyltransferase [Neisseria meningitidis 80179]
 gi|421561379|ref|ZP_16007227.1| 23S rRNA methyltransferase [Neisseria meningitidis NM2657]
 gi|433469505|ref|ZP_20426926.1| 23S rRNA methyltransferase [Neisseria meningitidis 98080]
 gi|433473705|ref|ZP_20431066.1| 23S rRNA methyltransferase [Neisseria meningitidis 97021]
 gi|433482269|ref|ZP_20439529.1| 23S rRNA methyltransferase [Neisseria meningitidis 2006087]
 gi|433484252|ref|ZP_20441478.1| 23S rRNA methyltransferase [Neisseria meningitidis 2002038]
 gi|433486519|ref|ZP_20443714.1| 23S rRNA methyltransferase [Neisseria meningitidis 97014]
 gi|254670500|emb|CBA06240.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
 gi|325128395|gb|EGC51278.1| radical SAM enzyme, Cfr family [Neisseria meningitidis N1568]
 gi|402335049|gb|EJU70324.1| 23S rRNA methyltransferase [Neisseria meningitidis 80179]
 gi|402338842|gb|EJU74072.1| 23S rRNA methyltransferase [Neisseria meningitidis NM2657]
 gi|432203775|gb|ELK59825.1| 23S rRNA methyltransferase [Neisseria meningitidis 98080]
 gi|432210003|gb|ELK65969.1| 23S rRNA methyltransferase [Neisseria meningitidis 97021]
 gi|432216062|gb|ELK71945.1| 23S rRNA methyltransferase [Neisseria meningitidis 2006087]
 gi|432220938|gb|ELK76755.1| 23S rRNA methyltransferase [Neisseria meningitidis 2002038]
 gi|432221804|gb|ELK77608.1| 23S rRNA methyltransferase [Neisseria meningitidis 97014]
          Length = 364

 Score =  396 bits (1018), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +FN+MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L+        CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVTD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|304387385|ref|ZP_07369577.1| cfr family radical SAM enzyme [Neisseria meningitidis ATCC 13091]
 gi|304338636|gb|EFM04754.1| cfr family radical SAM enzyme [Neisseria meningitidis ATCC 13091]
          Length = 364

 Score =  396 bits (1018), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +FN+MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L+        CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVTD----VPCKFNLIPFNPFPNSRYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|296136235|ref|YP_003643477.1| radical SAM enzyme, Cfr family [Thiomonas intermedia K12]
 gi|295796357|gb|ADG31147.1| radical SAM enzyme, Cfr family [Thiomonas intermedia K12]
          Length = 379

 Score =  396 bits (1018), Expect = e-107,   Method: Composition-based stats.
 Identities = 182/341 (53%), Positives = 249/341 (73%), Gaps = 6/341 (1%)

Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
           G   FRA+Q+ +W+H+ GV+DF  M+DL+  LR+ L+   +I A  ++S+Q S DGT KW
Sbjct: 26  GHAAFRARQVFRWMHQKGVADFEAMSDLAKPLRQFLREHAHIAALPVLSEQRSADGTVKW 85

Query: 597 IFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
           +F V + N +E VFIPE  RNTLC+S+Q GCA+NC FCSTG QGF RNL   EI+ QLW 
Sbjct: 86  LFDVGQGNAVEAVFIPEAQRNTLCVSSQAGCAVNCKFCSTGHQGFSRNLQTWEILAQLWH 145

Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
            EF +RRE  +     G+R I+N+VMMGMGEPL NY + + AL+ +L D  YGLSRR V 
Sbjct: 146 AEFTMRRELGL---PGGERAISNVVMMGMGEPLQNYSALVPALRTMLDDDGYGLSRRRVT 202

Query: 716 LSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSP 775
           +STSG++PMID+L+Q+CPV LAVSLHA  + LR++LVP+++KYPL EL+ AC RY+ ++P
Sbjct: 203 VSTSGVVPMIDRLSQDCPVALAVSLHAPVDALRDELVPLNRKYPLHELLAACKRYLDFAP 262

Query: 776 RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRI 835
           R  ITFEYCML G+NDT   A +L+ L+R  ++  +CK NLIPFN FP S L  S  +R+
Sbjct: 263 RDFITFEYCMLDGVNDTPALAEDLVRLVRAAQV--NCKFNLIPFNPFPQSGLKRSSAARV 320

Query: 836 KIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
             FA++L+++G+  T+RK RG+DI+AACGQL+GE  D  ++
Sbjct: 321 AAFAQVLLDAGLVTTVRKTRGDDIDAACGQLAGEVQDRTRR 361


>gi|344199661|ref|YP_004783987.1| GTP-binding protein engA [Acidithiobacillus ferrivorans SS3]
 gi|343775105|gb|AEM47661.1| GTP-binding protein engA [Acidithiobacillus ferrivorans SS3]
          Length = 449

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/429 (44%), Positives = 281/429 (65%), Gaps = 6/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  ++ LVGRPNVGKST FNRLT +R+ALVA++PGLTRDRHYG        ++++DTGGF
Sbjct: 1   MTAIIALVGRPNVGKSTFFNRLTRTREALVADFPGLTRDRHYGTAQFEGHQYLVVDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EPE ++G++  M  QT+ AI E+D + F+VD ++GL  QD  I   LR+ G+PI LV+NK
Sbjct: 61  EPEEREGLVAAMAVQTRLAITEADAVCFLVDAKEGLSAQDAEIAEELRRGGKPIYLVVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +   +   L +F+ LG+G P+ ISA +G+G++  LE I + +LP  +     E     +
Sbjct: 121 MDAKGAVSELPEFHRLGLGMPYTISAAHGHGVEPLLEAIFS-DLPNPE----DEAAAAAA 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            +  ++A++G+PNVGKSTL+N++LGE RV+ +D PGTTRDSI+  +E   K Y++IDTAG
Sbjct: 176 GKGPRIAMLGRPNVGKSTLVNAMLGEKRVLVFDEPGTTRDSIRIPYERQGKPYVMIDTAG 235

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  E +EK SV+KTL ++ EA+VV+L+LDA+  I+ QD ++     E GR ++V 
Sbjct: 236 MRRRARVGEGLEKLSVLKTLSALREADVVLLVLDARLGIAEQDSHLVGVAVELGRPIVVV 295

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   QRK +K  ++++LNF+ +A    ISA+    +    +SI+ ++  S  H 
Sbjct: 296 VNKWDGMNPEQRKAVKQELERRLNFIKYAPIYTISALHGTGVGDLYKSIDQLWIDSRRHF 355

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  + RAL   I+ H P      R KLRY HQGG+NP  +V HGN++  +   YKRYLE
Sbjct: 356 STGELNRALADVIETHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQVARLPGTYKRYLE 415

Query: 420 KYFYRTFSL 428
             F R   L
Sbjct: 416 SAFRRALHL 424


>gi|397663982|ref|YP_006505520.1| GTPase involved in ribosome synthesis and maintenance [Legionella
           pneumophila subsp. pneumophila]
 gi|395127393|emb|CCD05585.1| GTPase involved in ribosome synthesis and maintenance [Legionella
           pneumophila subsp. pneumophila]
          Length = 462

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/433 (49%), Positives = 294/433 (67%), Gaps = 16/433 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG      KSFII+DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60

Query: 61  E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
              +++   +  M++Q++ A+ E+++I+F+VDGR GL   D+ I   LRK  + + LV+N
Sbjct: 61  GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K++ IN  I+  DF  LGI + H ISA +G GI + LE IL    P+    +  E T+  
Sbjct: 119 KTDGINEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PFTT--ETHEATDDK 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           +I   K+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F   +K+Y+LIDTA
Sbjct: 174 AI---KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTA 230

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+++  E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+  FI ESG++L++
Sbjct: 231 GVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKALVI 290

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  + ++ IK+ + ++L+F +FA   FISA+  + +    + IN  Y S+I  
Sbjct: 291 AVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSAIQS 350

Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
            ST ++TR L  ISA K+ PPC     R KLRYAH GG NPP+IVIHGN+L  +   YKR
Sbjct: 351 FSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPESYKR 408

Query: 417 YLEKYFYRTFSLI 429
           YL   F +   L+
Sbjct: 409 YLNNEFIKHLGLV 421


>gi|419797471|ref|ZP_14322948.1| 23S rRNA m2A2503 methyltransferase [Neisseria sicca VK64]
 gi|385698033|gb|EIG28425.1| 23S rRNA m2A2503 methyltransferase [Neisseria sicca VK64]
          Length = 364

 Score =  396 bits (1017), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 239/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +WIH+ G   FN+MTDL+ SLR KL     +  P +M  Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWIHQAGAQSFNEMTDLAKSLRLKLNEQASVDVPKLMMAQESTDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSTNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|385851095|ref|YP_005897610.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M04-240196]
 gi|325205918|gb|ADZ01371.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M04-240196]
 gi|389605577|emb|CCA44494.1| ribosomal RNA large subunit methyltransferase N [Neisseria
           meningitidis alpha522]
          Length = 364

 Score =  396 bits (1017), Expect = e-107,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +F++MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFDEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|261377750|ref|ZP_05982323.1| radical SAM enzyme, Cfr family [Neisseria cinerea ATCC 14685]
 gi|269146035|gb|EEZ72453.1| radical SAM enzyme, Cfr family [Neisseria cinerea ATCC 14685]
          Length = 366

 Score =  396 bits (1017), Expect = e-107,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 240/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G  +F +MTDL+ SLR KL     I  P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWIHQSGAQNFGEMTDLAKSLRYKLNEQASIDIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNL+  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESERGTLCISSQVGCALECTFCSTGRQGFNRNLSAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+++ + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFENVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +DKL    PV LAVSLHASN+ +RNK+VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDKLRDTMPVALAVSLHASNDEVRNKIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGVNDKAQHAYELIELVKD----VPCKFNLIPFNPFPNSGYERSNNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I+IF  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRIFIDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|119944927|ref|YP_942607.1| GTP-binding protein EngA [Psychromonas ingrahamii 37]
 gi|166225845|sp|A1SU43.1|DER_PSYIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|119863531|gb|ABM03008.1| small GTP-binding protein [Psychromonas ingrahamii 37]
          Length = 489

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/450 (43%), Positives = 295/450 (65%), Gaps = 24/450 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  I +  FI+IDTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M  Q+  AI E+D ++F+VD R G+   D+ I + LRK  + + +V NK
Sbjct: 61  TGD-EEGIDALMAGQSLLAIDEADAVLFLVDARAGMTIADEAIADHLRKQDKKVFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +++ S+  +FY LG+G  + I+A  G G++  +E  + ++  +    ++ +F+++ +
Sbjct: 120 TDGVDADSVCAEFYALGLGEVYHIAAAQGKGVRQMIE--IALDGFFDDVEQEDDFSDLET 177

Query: 180 -IEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
            +E+                   IK+A++G+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 178 GLEFVEEDEALLLKEQERLAALPIKLALIGRPNVGKSTLTNRILGEERVLVYDLPGTTRD 237

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI      ++++YILIDTAG+R+R K  E +EKFSVIKTL++I + NVV+L++DA+  IS
Sbjct: 238 SIYIPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLQAIEDCNVVLLIIDARDGIS 297

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+++  F   +GRSL++ VNKWD +    ++ +K+ + ++L F+ FA  +FISA+   
Sbjct: 298 DQDLSLLGFTLNAGRSLVIAVNKWDGMTEYDKERVKSELDRRLGFIDFAKIHFISALHGT 357

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            +    ES+   YDSS   +STS +TR +  A  +H P      R KLRYAH GG NPP+
Sbjct: 358 GVGHLYESVEEAYDSSTKRISTSILTRIMTMAAADHEPPMVGSRRVKLRYAHAGGYNPPL 417

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           IVIHGN++K + + YKRYL  YF R+  ++
Sbjct: 418 IVIHGNQVKKLADSYKRYLMNYFRRSLGIM 447


>gi|300114862|ref|YP_003761437.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113]
 gi|299540799|gb|ADJ29116.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113]
          Length = 464

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/431 (46%), Positives = 292/431 (67%), Gaps = 10/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGG- 59
           MK ++ LVGRPNVGKSTLFNRLT SRDALVA+ PG+TRDR YG  Y G++SF ++DTGG 
Sbjct: 1   MKALVALVGRPNVGKSTLFNRLTRSRDALVADQPGVTRDRQYGLAYCGEQSFFVVDTGGI 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            E E + G +  M  Q + AI E+D+I F+VD R+GL   D+ I  +LR + +P+ LVIN
Sbjct: 61  MEQESEIGSL--MRGQAQLAIEEADVIFFLVDAREGLSSLDEEIAEWLRCTEKPLKLVIN 118

Query: 120 KSENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K+E  +   ++ +FY LG+G P IISA  G G++     +L   L        +E + I 
Sbjct: 119 KAEGRDEDLVASEFYCLGLGEPAIISARQGQGVE-----VLLQALLTLLPVAGREESEIQ 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           + + +++A++G+PNVGKSTL+N +LGE RV++ + PGTTRDSI   F ++ + Y L+DTA
Sbjct: 174 A-KGLQLAVIGRPNVGKSTLVNRILGEERVLSSEIPGTTRDSISIPFRHHGRDYTLVDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           GIRRR++  + +EKFSVI++L+SI  A VVIL++DA  ++  QD+++A  I ESG+ +++
Sbjct: 233 GIRRRSRILDRVEKFSVIQSLQSIAIAQVVILVIDAHDSVVEQDLHLAGVILESGKGVVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +   QR+ +K ++ ++L FL FA  +FISA+  + +     SI+  Y S+   
Sbjct: 293 AVNKWDGLPLEQRQRVKKDLDRRLPFLVFARIHFISALHGSGVGDLFPSIDEAYQSANSQ 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           L T  + RAL++A++ HPP   K  R KLRYAHQGG+NPP I+IHGN+ + +  +Y+RYL
Sbjct: 353 LPTGELNRALLAAVEKHPPPIVKGRRIKLRYAHQGGQNPPKIIIHGNQAEAVSANYRRYL 412

Query: 419 EKYFYRTFSLI 429
             YF   F L+
Sbjct: 413 INYFRSVFGLM 423


>gi|417950299|ref|ZP_12593423.1| GTP-binding protein Der [Vibrio splendidus ATCC 33789]
 gi|342806778|gb|EGU41990.1| GTP-binding protein Der [Vibrio splendidus ATCC 33789]
          Length = 493

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/457 (42%), Positives = 295/457 (64%), Gaps = 33/457 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAQLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I   LR+  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK--------- 170
            + I+  + S DF++LG+ + + I+A +G G+   ++  L    P+ +  K         
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAEQGEISDL 176

Query: 171 ------------------KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
                             ++EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TEFEDEEAEQVDFTEEEAEQEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 235

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI      + ++Y+LIDTAG+RRR    E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 236 MPGTTRDSIYIPMSRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAVEDANVVLLVI 295

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD + ++ ++ +K  + ++L F+ FA  +F
Sbjct: 296 DARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHF 355

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH 
Sbjct: 356 ISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHA 415

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPIIVIHGN+++ + + YKR+L  Y+ R+  ++
Sbjct: 416 GGYNPPIIVIHGNQVRDLPDSYKRFLMNYYRRSLEIM 452


>gi|416225549|ref|ZP_11626897.1| GTP-binding protein EngA [Moraxella catarrhalis 103P14B1]
 gi|416235991|ref|ZP_11630386.1| GTP-binding protein EngA [Moraxella catarrhalis 12P80B1]
 gi|326560782|gb|EGE11149.1| GTP-binding protein EngA [Moraxella catarrhalis 103P14B1]
 gi|326563523|gb|EGE13782.1| GTP-binding protein EngA [Moraxella catarrhalis 12P80B1]
          Length = 472

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/431 (45%), Positives = 288/431 (66%), Gaps = 11/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           +KPV+ L+GRPNVGKSTLFN+LT SR ALVA+  GLTRDR YG+ +   KSFI++DTGG 
Sbjct: 3   IKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAGLTRDRQYGDAHFENKSFIVVDTGGI 62

Query: 61  EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
             E+  G   I   M  Q+  AI E+DI++F+VD R GL+  D  I +FL   G+P+ LV
Sbjct: 63  G-EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLGKPVFLV 121

Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
            NK + ++ +   +F+ LG G P+  +A +G G+ N LE+ LT ++P  +   + E    
Sbjct: 122 ANKMDGVHEAAYAEFFALGFGEPYATAASHGRGVTNLLES-LTADMP--EDMPEDELDG- 177

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
              + +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   + Y+LIDT
Sbjct: 178 ---KALKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPFEREGRSYVLIDT 234

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR +  E +EKFSV+KTL++I +ANVV++++DA++ I  QD+++  +  ++GR+++
Sbjct: 235 AGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVVVIDAKEGIVDQDLHMLGYALDAGRAIV 294

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           V +NKWD +  +Q+  +K  I ++ NF+ +   + ISA+  N +     SI+  Y++S+ 
Sbjct: 295 VAINKWDGLSQDQKDSVKIEIDRRFNFVPWVKIHLISALYGNGVGKLYPSIHKAYEASMF 354

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            +ST+++TR L  A+ +HPP      R KLRYAH GG NPP+IVIHGN+   +   Y+RY
Sbjct: 355 KVSTNQLTRILEDAVASHPPPMVGGRRIKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRY 414

Query: 418 LEKYFYRTFSL 428
           LE  F   + L
Sbjct: 415 LENVFRNVYKL 425


>gi|296314505|ref|ZP_06864446.1| radical SAM enzyme, Cfr family [Neisseria polysaccharea ATCC 43768]
 gi|296838812|gb|EFH22750.1| radical SAM enzyme, Cfr family [Neisseria polysaccharea ATCC 43768]
          Length = 364

 Score =  396 bits (1017), Expect = e-107,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +F++MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFDEMTDLAKSLRHKLNEQASIEIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACRRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDRAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|421464672|ref|ZP_15913362.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens
           WC-A-157]
 gi|400205425|gb|EJO36406.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens
           WC-A-157]
          Length = 469

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/429 (44%), Positives = 293/429 (68%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M +Q+K AI E+D+IIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  -GESEQGIDSYMAEQSKTAIHEADLIIFVVDARAGLLASDEQIARELRTLGKKVFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  ++ +FY+LG+G P  ++A +G G+   LE +L  ++P  +  ++ +      
Sbjct: 120 VDGVHAEAAVVEFYKLGLGEPMHVAASHGRGVAQMLEEVLA-DVPEDENREEHDKAT--- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++AI+G+PNVGKSTL+N LLGE RV+ YD PGTTRDS+   FE + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEERVVAYDEPGTTRDSVYIPFERDGRQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K  E+IEKFSV+KTL+++ +A+VV+++LDA++ +  QD+++  +  E+GR++++ 
Sbjct: 234 VRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVLDAREGVVEQDLHLIGYALEAGRAMVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     SI+  YDSS + +
Sbjct: 294 INKWDNMSEYDRKQCKLDVDRRFDFIPWARIHLISALHGTGVGDLYPSIHRAYDSSHLKV 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYLE
Sbjct: 354 SPAKLTQILNDATEAHQPPMVGGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413

Query: 420 KYFYRTFSL 428
             F + + L
Sbjct: 414 NVFRKVYKL 422


>gi|307610240|emb|CBW99801.1| hypothetical protein LPW_15641 [Legionella pneumophila 130b]
          Length = 462

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/436 (48%), Positives = 292/436 (66%), Gaps = 22/436 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG      KSFII+DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60

Query: 61  E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
              +++   +  M++Q++ A+ E+++I+F+VDGR GL   D+ I   LRK  + + LV+N
Sbjct: 61  GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K++ IN  I+  DF  LGI + H ISA +G GI + LE IL    P+         T +H
Sbjct: 119 KTDGINEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PF--------ITEMH 167

Query: 179 SI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
                + IK+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F   +K+Y+LI
Sbjct: 168 EATDDKAIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLI 227

Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
           DTAG+RR+++  E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+  FI ESG++
Sbjct: 228 DTAGVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKA 287

Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
           L++ VNKWD +    ++ IK+ + ++L+F +FA   FISA+  + +    + IN  Y S+
Sbjct: 288 LVIAVNKWDGLEEEHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSA 347

Query: 356 IIHLSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
           I   ST ++TR L  ISA K+ PPC     R KLRYAH GG NPP+IVIHGN+L  +   
Sbjct: 348 IQSFSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPES 405

Query: 414 YKRYLEKYFYRTFSLI 429
           YKRYL   F +   L+
Sbjct: 406 YKRYLNNEFIKHLGLV 421


>gi|350552159|ref|ZP_08921365.1| GTP-binding protein engA [Thiorhodospira sibirica ATCC 700588]
 gi|349795024|gb|EGZ48830.1| GTP-binding protein engA [Thiorhodospira sibirica ATCC 700588]
          Length = 467

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/431 (44%), Positives = 283/431 (65%), Gaps = 5/431 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKSTLFN+LT SRDALVA+ PGLTRDR YG G +G   ++++DTGG 
Sbjct: 1   MSAVIALVGRPNVGKSTLFNQLTRSRDALVADLPGLTRDRQYGIGKVGDFPYMVVDTGGL 60

Query: 61  EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
             E +  +M + M  QT+QAI ESD+++ ++D R+GL   D+ I   LR+S +P+++V N
Sbjct: 61  SGEAE--VMDQLMAAQTRQAIAESDLVLLMLDTREGLNSVDEAIAEQLRRSAKPVLVVAN 118

Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           KS+ ++ +  +L+F+ LG G P+ I+A++G GI   +  +    LP       +      
Sbjct: 119 KSDGLDVTQATLEFHALGFGAPYAIAAVHGRGIAGLMAEVKQ-RLPQAAVVSTESQALDM 177

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               I++A+VG+PNVGKSTL+N +LGE RV+  D PGTTRDSI   FE + + Y LIDTA
Sbjct: 178 DWPGIRIALVGRPNVGKSTLLNRILGEERVLACDLPGTTRDSIFVPFERDGQDYTLIDTA 237

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR +  + IEKFSVIKTL++I  A+VVI+L+DA Q I  QD ++   I E+GR+++V
Sbjct: 238 GVRRRARVHDGIEKFSVIKTLQAIEAAHVVIMLVDAHQGIVEQDAHLLGLILEAGRAVVV 297

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +  + R+ +++++  +L F+ FA   FISA+    +     S+   Y S+ + 
Sbjct: 298 AINKWDGLSPDARERLRDDLGLRLGFMDFAEQRFISALHGTGVGDLFGSVQRAYASAQLK 357

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST+ +TR L  A+  H P   +  R KLRYAHQGG+NPP+IVIHG + + +   YKRYL
Sbjct: 358 VSTAELTRLLEMALVEHQPPLVRGRRIKLRYAHQGGQNPPLIVIHGKQTESLPGAYKRYL 417

Query: 419 EKYFYRTFSLI 429
             +F +   L+
Sbjct: 418 SNHFRQQLRLV 428


>gi|372489753|ref|YP_005029318.1| 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin
           oxidoreductase subunit CD [Dechlorosoma suillum PS]
 gi|359356306|gb|AEV27477.1| 23S rRNA m2A2503 methyltransferase [Dechlorosoma suillum PS]
          Length = 367

 Score =  396 bits (1017), Expect = e-107,   Method: Composition-based stats.
 Identities = 185/341 (54%), Positives = 249/341 (73%), Gaps = 7/341 (2%)

Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
           GE PFRA+Q+ +W+H FG +DF+ MTD++ SLR+ LK +  +  P I+SD++S DGTRK+
Sbjct: 20  GEKPFRARQVLRWMHHFGQADFDAMTDIAKSLREMLKANAVVLPPAIVSDKLSDDGTRKF 79

Query: 597 IFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
           +F V   N +ETVFIPE +R TLCISTQ GCA++C FCSTG+QGF RNL V EIIGQLW 
Sbjct: 80  LFDVGNGNAVETVFIPEDDRGTLCISTQAGCALDCAFCSTGKQGFNRNLAVSEIIGQLWQ 139

Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
               L  +   +   + +R I+N+V+MGMGEPL N+++ + ALKL+L D+AYGLSRR V 
Sbjct: 140 ANRALGVDP--RHPDKAERIISNVVLMGMGEPLANFEAAVAALKLMLDDNAYGLSRRRVT 197

Query: 716 LSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSP 775
           +STSG++P +D+L  ECPV LAVSLHA N+ LR++LVPI++KYP+ EL+ AC RY+  +P
Sbjct: 198 VSTSGLVPAMDRLRDECPVALAVSLHAPNDKLRDELVPINQKYPIAELMAACQRYLEKAP 257

Query: 776 RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRI 835
           R  +TFEY ML G+ND+D HA EL+++ R       CK NLIPFN FP S    SK  RI
Sbjct: 258 RDFVTFEYVMLDGVNDSDAHARELLAITRD----VPCKFNLIPFNPFPGSPFRRSKAERI 313

Query: 836 KIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           + FA IL+ +G+  T RK RG+DI+AACGQL+G+  D  ++
Sbjct: 314 RRFADILIQAGVVTTTRKTRGDDIDAACGQLAGQVQDKTRR 354


>gi|344343052|ref|ZP_08773922.1| GTP-binding protein engA [Marichromatium purpuratum 984]
 gi|343805604|gb|EGV23500.1| GTP-binding protein engA [Marichromatium purpuratum 984]
          Length = 466

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/430 (45%), Positives = 279/430 (64%), Gaps = 6/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G IG   ++I+DTGG 
Sbjct: 1   MLPVITLVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGVGRIGPGPYVIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                +G+   M +Q + AI E+D ++F+VD R G   +D  I   LR+ G+P+ LV+NK
Sbjct: 61  A-TATEGVETLMERQVQLAIEEADHLLFVVDARDGCTPEDIAIAERLRRIGKPMTLVVNK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           S+  +  ++  +F+ LG+G P  +SA  G  I+  +E++            ++E      
Sbjct: 120 SDTFDPLLATAEFHALGLGEPRAVSATQGMAIRPLVEHVFA----LLPEPAEEEAAEEDD 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +KVAIVG+PN GKSTLIN L+GE RV+ +D+PGTTRDS+   FE + ++Y LIDTAG
Sbjct: 176 ERGVKVAIVGRPNAGKSTLINRLVGEERVVAFDSPGTTRDSVFIPFERDGRRYTLIDTAG 235

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E IEKFSVIKTL++I  ANVV+L++DA   I  QD  +A  + +SGR+++V 
Sbjct: 236 LRRRAKVKEAIEKFSVIKTLQAIEAANVVVLVIDAHAGIGEQDATLAGHVIDSGRAVVVA 295

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    R+ +K    +KL FL FA  + ISA+  + +   ++ ++  Y ++  +L
Sbjct: 296 INKWDGLDAEAREQVKAQFTRKLGFLDFAKLHRISALHGSGVGLLLDDVDLAYANATRNL 355

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L +A++ H P   +  R KLRYAHQGG+NPP++VIHGN+ +     YKRYL 
Sbjct: 356 STPELTRLLEAAVQEHQPPLVRGRRIKLRYAHQGGRNPPVVVIHGNQTEETPASYKRYLI 415

Query: 420 KYFYRTFSLI 429
             F R   L+
Sbjct: 416 NRFRRELDLL 425


>gi|153838555|ref|ZP_01991222.1| GTP-binding protein EngA [Vibrio parahaemolyticus AQ3810]
 gi|149748070|gb|EDM58929.1| GTP-binding protein EngA [Vibrio parahaemolyticus AQ3810]
          Length = 498

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/457 (43%), Positives = 298/457 (65%), Gaps = 29/457 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  + ++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPADEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
           K + I++  +  DF++LG+ + + I+A +G G+   LE        ++LT E    +   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLTSESEEGEIED 179

Query: 171 KKEFTN--IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
             EF +  I   EY                IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDAEIAPDEYTEEEAEAEFQRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++Y++IDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHF 359

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH 
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAHA 419

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN ++ + + YKRYL  YF ++  ++
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYLMNYFRKSLEIM 456


>gi|322831770|ref|YP_004211797.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602]
 gi|384256886|ref|YP_005400820.1| GTP-binding protein Der [Rahnella aquatilis HX2]
 gi|321166971|gb|ADW72670.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602]
 gi|380752862|gb|AFE57253.1| GTP-binding protein Der [Rahnella aquatilis HX2]
          Length = 494

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/457 (44%), Positives = 290/457 (63%), Gaps = 32/457 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I    FII+DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTKTRDALVADFPGLTRDRKYGRAEIEGNEFIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M  Q+  AI E+DI++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSREKATFLVANK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
           ++ ++  S + DFY LG+G+ + I+A +G G+   +E++L   +P+              
Sbjct: 120 TDGLDPDSATGDFYSLGLGDVYAIAASHGRGVTQLIEHVL---IPFVGEKPEEVELTEEE 176

Query: 166 --KKFFKKKEFTNIHSIE-----------YIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
               ++ ++E T     E            IK+AIVG+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 ANAAYWAEQEATGDEIPEDEEDNFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD 236

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI      + ++Y+LIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVMLVI 296

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++ IS QD+++  FI  SGRSL++ VNKWD +    R  +K+ +  +L F+ FA  +F
Sbjct: 297 DAREGISDQDLSLLGFILNSGRSLVIVVNKWDGMSEEARAQVKDQLDLRLGFVDFARIHF 356

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+  + + +  ES+N  Y  +   +STS +TR +  A  +H P      R KL+YAH 
Sbjct: 357 ISALHGSGVGNLFESVNEAYTCATTRVSTSLLTRIMQMAADDHQPPLVNGRRVKLKYAHA 416

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN++K + + YKRYL  YF R+  ++
Sbjct: 417 GGYNPPIVVIHGNQVKDLADSYKRYLMNYFRRSLKVM 453


>gi|417320643|ref|ZP_12107186.1| GTP-binding protein Der [Vibrio parahaemolyticus 10329]
 gi|328472592|gb|EGF43455.1| GTP-binding protein Der [Vibrio parahaemolyticus 10329]
          Length = 498

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/457 (43%), Positives = 298/457 (65%), Gaps = 29/457 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  + ++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTSADEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
           K + I++  +  DF++LG+ + + I+A +G G+   LE        ++LT E    +   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLTSESEEGEIED 179

Query: 171 KKEFTN--IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
             EF +  I   EY                IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDAEIAPDEYTEEEAEAEFQRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++Y++IDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHF 359

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH 
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAHA 419

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN ++ + + YKRYL  YF ++  ++
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYLMNYFRKSLEIM 456


>gi|429462724|ref|YP_007184187.1| 23S rRNA (adenine2503-C2)-methyltransferase [Candidatus
           Kinetoplastibacterium crithidii (ex Angomonas deanei
           ATCC 30255)]
 gi|451811522|ref|YP_007447977.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium crithidii TCC036E]
 gi|429338238|gb|AFZ82661.1| 23S rRNA (adenine2503-C2)-methyltransferase [Candidatus
           Kinetoplastibacterium crithidii (ex Angomonas deanei
           ATCC 30255)]
 gi|451776680|gb|AGF47679.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium crithidii TCC036E]
          Length = 373

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/343 (58%), Positives = 247/343 (72%), Gaps = 16/343 (4%)

Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHV 600
           +R  QL+ WIH+  VS F++MT+LSM LR  LK    I+A  + + Q S DGTRKW+F  
Sbjct: 30  YRISQLKNWIHRRQVSSFDEMTNLSMKLRDYLKTIAKIEAMPLKTQQFSMDGTRKWLFDA 89

Query: 601 K-KNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTE-- 657
              N +ETVFIP+ NRNTLCIS+Q GCA+NC FC TG+QGF RNLT  EIIGQLW  +  
Sbjct: 90  GFDNAVETVFIPDSNRNTLCISSQAGCAVNCSFCFTGQQGFNRNLTTSEIIGQLWWAQKN 149

Query: 658 -----FKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
                F    +K+I INS    +ITNIVMMGMGEPLLNY   I AL+L++ +++Y LS+R
Sbjct: 150 INNDFFSGNLDKSI-INSP---KITNIVMMGMGEPLLNYSQVIPALRLMMDENSYALSKR 205

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            + LSTSGI+PMIDKL  +CPV LA+SLHA N+ LR+KL+PI+KKYPL+EL+ +C  Y++
Sbjct: 206 KITLSTSGIVPMIDKLVNDCPVSLAISLHAPNDELRDKLIPINKKYPLQELMKSCRNYVS 265

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
           Y+PR  ITFEYCML  IND+D HA ELI L+R  K    CKINLIPFN FPNSNL  S  
Sbjct: 266 YAPRDFITFEYCMLDNINDSDKHAFELIELVRTIK----CKINLIPFNSFPNSNLKRSTQ 321

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
           +RI  F KIL + GI  T+RK RG+DINAACGQL+G   +I K
Sbjct: 322 NRILSFVKILNSQGIVTTVRKTRGDDINAACGQLAGSIKNITK 364


>gi|54297453|ref|YP_123822.1| GTP-binding protein EngA [Legionella pneumophila str. Paris]
 gi|148359075|ref|YP_001250282.1| GTP-binding protein EngA [Legionella pneumophila str. Corby]
 gi|296107123|ref|YP_003618823.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy]
 gi|81822576|sp|Q5X522.1|DER_LEGPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166225822|sp|A5IC36.1|DER_LEGPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|53751238|emb|CAH12649.1| hypothetical protein lpp1498 [Legionella pneumophila str. Paris]
 gi|148280848|gb|ABQ54936.1| GTP-binding protein EngA [Legionella pneumophila str. Corby]
 gi|295649024|gb|ADG24871.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy]
          Length = 462

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/433 (48%), Positives = 294/433 (67%), Gaps = 16/433 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG      KSFII+DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60

Query: 61  E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
              +++   +  M++Q++ A+ E+++I+F+VDGR GL   D+ I   LRK  + + LV+N
Sbjct: 61  GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K++ +N  I+  DF  LGI + H ISA +G GI + LE IL    P+    +  E T+  
Sbjct: 119 KTDGMNEDIACADFQSLGITDVHAISASHGGGISSLLEEILE---PFTT--ETHEATDDK 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           +I   K+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F   +K+Y+LIDTA
Sbjct: 174 AI---KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTA 230

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+++  E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+  FI ESG++L++
Sbjct: 231 GVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKALVI 290

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  + ++ IK+ + ++L+F +FA   FISA+  + +    + IN  Y S+I  
Sbjct: 291 AVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSAIQS 350

Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
            ST ++TR L  ISA K+ PPC     R KLRYAH GG NPP+IVIHGN+L  +   YKR
Sbjct: 351 FSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPESYKR 408

Query: 417 YLEKYFYRTFSLI 429
           YL   F +   L+
Sbjct: 409 YLNNEFIKHLGLV 421


>gi|378580965|ref|ZP_09829617.1| 50S ribosome biogenesis/stability factor [Pantoea stewartii subsp.
           stewartii DC283]
 gi|377816444|gb|EHT99547.1| 50S ribosome biogenesis/stability factor [Pantoea stewartii subsp.
           stewartii DC283]
          Length = 494

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/456 (44%), Positives = 291/456 (63%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+D+++F+VD R G++  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGMMPADQQIAKHLRARQKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  + I+A +G G+ + LE  L   LP+ +     E T    
Sbjct: 120 TDGLDPDQAIVDFYSLGLGEIYAIAASHGRGVTSLLETAL---LPWMEKVDPVEVTEEDE 176

Query: 180 IEY--------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
            E                           IK+AIVG+PNVGKSTL N +LGE+RV+ YD 
Sbjct: 177 NEAYWAALAAEENGEEEEEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    E ++++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMERDDREYVLIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLVID 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A+  IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +FI
Sbjct: 297 ARAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARVHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+  + + +  ES+   YD S   ++TS +TR +  A ++H P   +  R KL+YAH G
Sbjct: 357 SALHGSGVGNLFESVTEAYDCSTKRVNTSLLTRIMNMAAEDHQPPLVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPI+VIHGN++K + + YKRYL  YF R+ +++
Sbjct: 417 GYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLNVM 452


>gi|255321133|ref|ZP_05362299.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SK82]
 gi|262380178|ref|ZP_06073333.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens
           SH164]
 gi|421855022|ref|ZP_16287404.1| GTPase Der [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
 gi|255301687|gb|EET80938.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SK82]
 gi|262298372|gb|EEY86286.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens
           SH164]
 gi|403189522|dbj|GAB73605.1| GTPase Der [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
          Length = 469

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/429 (44%), Positives = 293/429 (68%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M +Q+K AI E+D+IIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  G-ESEQGIDSYMAEQSKTAIHEADLIIFVVDARAGLLASDEQIARELRTLGKKVFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  ++ +FY+LG+G P  ++A +G G+   LE +L  ++P  +  ++ +      
Sbjct: 120 VDGVHAEAAVVEFYKLGLGEPMHVAASHGRGVAQMLEEVLA-DVPEDENPEEHDKAT--- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++AI+G+PNVGKSTL+N LLGE RV+ YD PGTTRDS+   FE + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEERVVAYDEPGTTRDSVYIPFERDGRQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K  E+IEKFSV+KTL+++ +A+VV+++LDA++ +  QD+++  +  E+GR++++ 
Sbjct: 234 VRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVLDAREGVVEQDLHLIGYALEAGRAMVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     SI+  YDSS + +
Sbjct: 294 INKWDNMSEYDRKQCKLDVDRRFDFIPWARIHLISALHGTGVGDLYPSIHRAYDSSHLKV 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYLE
Sbjct: 354 SPAKLTQILNDATEAHQPPMVGGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413

Query: 420 KYFYRTFSL 428
             F + + L
Sbjct: 414 NVFRKVYKL 422


>gi|148979611|ref|ZP_01815616.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3]
 gi|145961696|gb|EDK26993.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3]
          Length = 493

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/457 (42%), Positives = 295/457 (64%), Gaps = 33/457 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAQLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I   LR+  +P +LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK--------- 170
            + I+  + S DF++LG+ + + I+A +G G+   ++  L    P+ +  K         
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAEQGKISDL 176

Query: 171 ------------------KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
                             ++EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TEFEDEEAEQVDFTEEEAEQEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 235

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI      + ++Y+LIDTAG+RRR    E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 236 MPGTTRDSIYIPMSRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAVEDANVVLLVI 295

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD + ++ ++ +K  + ++L F+ FA  +F
Sbjct: 296 DARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHF 355

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH 
Sbjct: 356 ISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHA 415

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPIIVIHGN+++ + + YKR+L  Y+ R+  ++
Sbjct: 416 GGYNPPIIVIHGNQVRDLPDSYKRFLMNYYRRSLEIM 452


>gi|255021269|ref|ZP_05293318.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756]
 gi|254969280|gb|EET26793.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756]
          Length = 447

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/429 (44%), Positives = 280/429 (65%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKSTLFNRLT SR+ALVA+ PGLTRDRHYG    G + F++IDTGGF
Sbjct: 1   MAAVIALVGRPNVGKSTLFNRLTRSREALVADLPGLTRDRHYGVAQHGTQRFLVIDTGGF 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           EPE ++G++  M  QT+QAI E+D + F+VD ++GL  QD+ I   LR+SG+ + LV+NK
Sbjct: 61  EPEEREGLVAAMAAQTRQAIAEADAVCFLVDAKEGLSAQDEEIAAELRRSGKTVYLVVNK 120

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +   +   L +F+ LG+G P+ I+A +G+G++  L+ I      +      +E     S
Sbjct: 121 MDVRGAVAELPEFHRLGLGMPYTIAASHGHGVETLLDAI------FADLAVPEEAAAELS 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +   ++A++G+PNVGKSTL+N++LGE RVI YD PGTTRDSI+  +E   + Y++IDTAG
Sbjct: 175 LSGPRIAVLGRPNVGKSTLVNAMLGEQRVIVYDAPGTTRDSIRIPYERAGRPYVMIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR +  E +EK SV+KTL ++ EA+VV+++LDA+  ++ QD ++     E  R +I+ 
Sbjct: 235 IRRRARVGEGLEKLSVLKTLAALKEADVVLMVLDARDGVTDQDAHLVGVAAELWRPMILL 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    R++ K  +++ L FLS+A    ISA+  + +     SI+ ++  +  H 
Sbjct: 295 LNKWDGLDARARQMAKAALERHLGFLSYAPVYTISALHGSGVGDLYPSIDRLWRDARRHF 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ + R L   I++H P      R KLRY HQGG+NP  +V HGN+L  +   YKRYLE
Sbjct: 355 STAELNRVLAQIIESHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQLNRLPGAYKRYLE 414

Query: 420 KYFYRTFSL 428
             F +   L
Sbjct: 415 SAFRKALGL 423


>gi|349574484|ref|ZP_08886432.1| cfr family radical SAM enzyme [Neisseria shayeganii 871]
 gi|348013953|gb|EGY52849.1| cfr family radical SAM enzyme [Neisseria shayeganii 871]
          Length = 363

 Score =  395 bits (1016), Expect = e-107,   Method: Composition-based stats.
 Identities = 184/344 (53%), Positives = 245/344 (71%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRA+Q+ +W+H  G +DF+ MTDL+ SLR KLK+   +  P +M+ Q S DGTR
Sbjct: 19  QMGEKPFRARQVMRWMHLGGAADFDDMTDLAKSLRAKLKDRAEVGVPDLMTAQKSRDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNL+  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLSAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEPL NY + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KALGVTPKNERVISNVVMMGMGEPLANYDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L ++ PV LAVSLHASN+ +RN++VP++KKYPL EL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLKEDMPVALAVSLHASNDAVRNEIVPLNKKYPLTELMAACRRYLAK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEY ML G+ND   HA EL++L+R       CK NLIPFN FP+S    S N 
Sbjct: 253 APRDFVTFEYVMLDGVNDRPEHARELLTLVRD----VPCKFNLIPFNPFPHSGYQRSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I+IF  IL  +G+ VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRIFRDILQQAGLVVTVRKTRGDDIDAACGQLAGQVRDKTRRQ 352


>gi|28897386|ref|NP_796991.1| GTP-binding protein EngA [Vibrio parahaemolyticus RIMD 2210633]
 gi|308094331|ref|ZP_05888700.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AN-5034]
 gi|308095608|ref|ZP_05907112.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus Peru-466]
 gi|308125630|ref|ZP_05776379.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus K5030]
 gi|308126072|ref|ZP_05907679.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AQ4037]
 gi|31340057|sp|Q87S12.1|DER_VIBPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|28805598|dbj|BAC58875.1| GTP-binding protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308086906|gb|EFO36601.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus Peru-466]
 gi|308092889|gb|EFO42584.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AN-5034]
 gi|308106660|gb|EFO44200.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AQ4037]
 gi|308113011|gb|EFO50551.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus K5030]
          Length = 498

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/457 (43%), Positives = 298/457 (65%), Gaps = 29/457 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  + ++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPADEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
           K + I++  +  DF++LG+ + + I+A +G G+   LE        ++LT E    +   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLTSESEEGEIED 179

Query: 171 KKEFTN--IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
             EF +  I   EY                IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDAEIAPDEYTEEEAEAEFQRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++Y++IDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD + +  ++ +K  + ++L F+ FA  +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHF 359

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ESI   Y S+   + TS +TR +  A  +H P   +  R KL+YAH 
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAHA 419

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN ++ + + YKRYL  YF ++  ++
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYLMNYFRKSLEIM 456


>gi|319638408|ref|ZP_07993170.1| ribosomal RNA large subunit methyltransferase N [Neisseria mucosa
           C102]
 gi|317400157|gb|EFV80816.1| ribosomal RNA large subunit methyltransferase N [Neisseria mucosa
           C102]
          Length = 362

 Score =  395 bits (1016), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 240/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +W+H+ G  +F +MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWMHQAGAQNFEEMTDLAKSLRAKLNEQATIEVPKLMMAQESTDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSTNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I+IF  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRIFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|113969576|ref|YP_733369.1| GTP-binding protein EngA [Shewanella sp. MR-4]
 gi|117919682|ref|YP_868874.1| GTP-binding protein EngA [Shewanella sp. ANA-3]
 gi|123029832|sp|Q0HKV5.1|DER_SHESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166225858|sp|A0KUJ9.1|DER_SHESA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|113884260|gb|ABI38312.1| small GTP-binding protein [Shewanella sp. MR-4]
 gi|117612014|gb|ABK47468.1| small GTP-binding protein [Shewanella sp. ANA-3]
          Length = 488

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/449 (44%), Positives = 287/449 (63%), Gaps = 24/449 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +     ++ E   
Sbjct: 120 IDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGIERQGEEEE 176

Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
           +   +Y                IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236

Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
           I    E + ++Y++IDTAG+RRR+K  EVIEKFSVIKTLK++ +ANVV+L++DA++ I+ 
Sbjct: 237 IYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGIAE 296

Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
           QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+    
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356

Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
           +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416

Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           VIHGN++  + + YKRY+  YF R+  ++
Sbjct: 417 VIHGNQVSKLPDSYKRYMMNYFRRSLKVV 445


>gi|397667163|ref|YP_006508700.1| GTPase involved in ribosome synthesis and maintenance [Legionella
           pneumophila subsp. pneumophila]
 gi|395130574|emb|CCD08819.1| GTPase involved in ribosome synthesis and maintenance [Legionella
           pneumophila subsp. pneumophila]
          Length = 462

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/433 (48%), Positives = 294/433 (67%), Gaps = 16/433 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG      KSFII+DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQYENKSFIIVDTGGI 60

Query: 61  E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
              +++   +  M++Q++ A+ E+++I+F+VDGR GL   D+ I   LRK  + + LV+N
Sbjct: 61  GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K++ +N  I+  DF  LGI + H ISA +G GI + LE IL    P+    +  E T+  
Sbjct: 119 KTDGMNEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PFTT--ETHEATDDK 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           +I   K+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F   +K+Y+LIDTA
Sbjct: 174 AI---KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTA 230

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+++  E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+  FI ESG++L++
Sbjct: 231 GVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKALVI 290

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  + ++ IK+ + ++L+F +FA   FISA+  + +    + IN  Y S+I  
Sbjct: 291 AVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSAIQS 350

Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
            ST ++TR L  ISA K+ PPC     R KLRYAH GG NPP+IVIHGN+L  +   YKR
Sbjct: 351 FSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPESYKR 408

Query: 417 YLEKYFYRTFSLI 429
           YL   F +   L+
Sbjct: 409 YLNNEFIKHLGLV 421


>gi|302878623|ref|YP_003847187.1| radical SAM enzyme, Cfr family [Gallionella capsiferriformans ES-2]
 gi|302581412|gb|ADL55423.1| radical SAM enzyme, Cfr family [Gallionella capsiferriformans ES-2]
          Length = 363

 Score =  395 bits (1016), Expect = e-107,   Method: Composition-based stats.
 Identities = 190/343 (55%), Positives = 244/343 (71%), Gaps = 11/343 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQL +WI++ G SDF  MTD++  LR KL  S  I  P I+ +++S DGTR
Sbjct: 18  EMGEKPFRAKQLLRWIYQVGESDFAAMTDIAAVLRNKLAQSACITVPDIVREELSDDGTR 77

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +E V+IPE  R TLCIS+Q GCA++C FCSTG+QGF RNLTV EIIGQL
Sbjct: 78  KWLLSVGSGNAVEAVYIPESARGTLCISSQAGCALDCSFCSTGKQGFNRNLTVAEIIGQL 137

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W    +L +      NS+G   ++N+VMMGMGEPLLN+ +T+ AL+L+L D AYGLSRR 
Sbjct: 138 WWANHQLGK------NSEGNWPVSNVVMMGMGEPLLNFDNTVSALRLMLDDQAYGLSRRR 191

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSGI+P +D+L +ECPV LAVSLHA N+ LR+KLVP+++KYPLKEL+ AC RY+  
Sbjct: 192 VTVSTSGIVPAMDRLREECPVALAVSLHAPNDALRDKLVPVNQKYPLKELLGACQRYLEK 251

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+NDT  HA EL+ L++     T CK NLIPFN FP S    S+  
Sbjct: 252 APRDFITFEYVMLDGVNDTVQHAHELVRLVKD----TPCKFNLIPFNPFPLSPYKRSRPD 307

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
            I+ F  +LM + I  T RK RG+DI AACGQL+G+  D  ++
Sbjct: 308 AIQRFRDVLMQADIITTTRKTRGDDIAAACGQLAGQVLDKTRR 350


>gi|226939612|ref|YP_002794685.1| hypothetical protein LHK_00683 [Laribacter hongkongensis HLHK9]
 gi|254807186|sp|C1DD41.1|RLMN_LARHH RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|226714538|gb|ACO73676.1| Radical SAM domain containing protein [Laribacter hongkongensis
           HLHK9]
          Length = 366

 Score =  395 bits (1016), Expect = e-107,   Method: Composition-based stats.
 Identities = 180/344 (52%), Positives = 246/344 (71%), Gaps = 11/344 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE PFRAKQ+ +W+H+ G +DF+ MTDL+ SLR KL ++  +  P +M +Q S DGTRK
Sbjct: 20  MGEKPFRAKQVMRWMHQMGQNDFDAMTDLAKSLRAKLHDTATVTVPSLMLEQASSDGTRK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE +R TLC+S+QVGCA+ C FCSTGRQGF RNL+  EIIGQLW
Sbjct: 80  WLLDVGTGNRVETVFIPEDDRGTLCVSSQVGCALECTFCSTGRQGFNRNLSTAEIIGQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
                    K++ +  + +R I+N+VMMGMGEPL NY + + A++++L DH YGLSRR V
Sbjct: 140 WAN------KSMGVTPKNERVISNVVMMGMGEPLANYDNVVAAMRIMLDDHGYGLSRRRV 193

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSG++P +D+L ++CPV LAVSLHA N+ +R+++VPI+KKYPL+EL+ AC RY+  +
Sbjct: 194 TLSTSGLVPAMDRLREDCPVALAVSLHAPNDRIRDEIVPINKKYPLRELLAACERYLEKA 253

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  +TFEY ML  IND   HA EL++L+R       CK NLIPFN FPNS    + N+ 
Sbjct: 254 PRDFVTFEYVMLDQINDRPEHARELVALVRD----VPCKFNLIPFNPFPNSGYGRASNNA 309

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEM 878
           ++ F  IL  +G   T+RK RG DI+AACGQL+G+  D  ++++
Sbjct: 310 VRAFRDILAEAGYITTVRKTRGEDIDAACGQLAGQVQDKTQRKV 353


>gi|421563510|ref|ZP_16009329.1| 23S rRNA methyltransferase [Neisseria meningitidis NM2795]
 gi|421907044|ref|ZP_16336932.1| Ribosomal RNA large subunit methyltransferase N 2 [Neisseria
           meningitidis alpha704]
 gi|393292008|emb|CCI72901.1| Ribosomal RNA large subunit methyltransferase N 2 [Neisseria
           meningitidis alpha704]
 gi|402341206|gb|EJU76393.1| 23S rRNA methyltransferase [Neisseria meningitidis NM2795]
          Length = 364

 Score =  395 bits (1015), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +F++MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFDEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+NIVMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNIVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L+        CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVTD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|385855368|ref|YP_005901881.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M01-240355]
 gi|325204309|gb|ADY99762.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M01-240355]
          Length = 364

 Score =  395 bits (1015), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +FN+MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTSAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L+        CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVTD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|52841771|ref|YP_095570.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|378777406|ref|YP_005185843.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila
           ATCC 43290]
 gi|81823403|sp|Q5ZV99.1|DER_LEGPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|52628882|gb|AAU27623.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|364508220|gb|AEW51744.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila
           ATCC 43290]
          Length = 462

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/433 (48%), Positives = 294/433 (67%), Gaps = 16/433 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG      KSFII+DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60

Query: 61  E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
              +++   +  M++Q++ A+ E+++I+F+VDGR GL   D+ I   LRK  + + LV+N
Sbjct: 61  GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKFNKKVHLVVN 118

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K++ +N  I+  DF  LGI + H ISA +G GI + LE IL    P+    +  E T+  
Sbjct: 119 KTDGMNEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PFTT--ETHEATDDK 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           +I   K+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F   +K+Y+LIDTA
Sbjct: 174 AI---KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTA 230

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+++  E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+  FI ESG++L++
Sbjct: 231 GVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKALVI 290

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  + ++ IK+ + ++L+F +FA   FISA+  + +    + IN  Y S+I  
Sbjct: 291 AVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSAIQS 350

Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
            ST ++TR L  ISA K+ PPC     R KLRYAH GG NPP+IVIHGN+L  +   YKR
Sbjct: 351 FSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPESYKR 408

Query: 417 YLEKYFYRTFSLI 429
           YL   F +   L+
Sbjct: 409 YLNNEFIKHLGLV 421


>gi|410627445|ref|ZP_11338184.1| GTP-binding protein [Glaciecola mesophila KMM 241]
 gi|410152937|dbj|GAC24953.1| GTP-binding protein [Glaciecola mesophila KMM 241]
          Length = 482

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/445 (44%), Positives = 288/445 (64%), Gaps = 20/445 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M  Q+  AI E+D+++F+VD R GL   D+ I + LRK  + + +V NK
Sbjct: 61  SGD-EQGIDMAMANQSLMAIDEADVVLFLVDARAGLTAADQGIADHLRKQNKSVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + I+  S S DF+ LG+G+ + I+A +G G+   L + L   +P  + F   +      
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLTHTL---MPLSEQFPDMQVPEDEE 176

Query: 180 IEY---------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
            +                IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI   
Sbjct: 177 ADEEIDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFIP 236

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
            E + ++Y+LIDTAG+RRR    E +EKFS++KTL++I EANVV+L++DAQ+ ++ QD++
Sbjct: 237 MERDGREYVLIDTAGVRRRRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGVTDQDLS 296

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+  SGRSL+V VNKWD +  + +  IK  + ++L F+ FA  ++ISA+   N+   
Sbjct: 297 LLGFVLNSGRSLVVAVNKWDGLAKDVKDEIKRELDRRLGFIDFARLHYISALHGTNVGHL 356

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            ES+   Y+S+   ++TS +TR +  A  +H P   +  R K++YAH GG NPPIIVIHG
Sbjct: 357 FESVQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHG 416

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++K + + YKRY+  YF ++  ++
Sbjct: 417 NQVKDLPDSYKRYMMNYFRKSLKVM 441


>gi|109899427|ref|YP_662682.1| GTP-binding protein EngA [Pseudoalteromonas atlantica T6c]
 gi|123170868|sp|Q15R60.1|DER_PSEA6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|109701708|gb|ABG41628.1| small GTP-binding protein [Pseudoalteromonas atlantica T6c]
          Length = 482

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/445 (44%), Positives = 288/445 (64%), Gaps = 20/445 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M  Q+  AI E+D+++F+VD R GL   D+ I   LRK  + + +V NK
Sbjct: 61  SGD-EQGIDMAMANQSLMAIDEADVVLFLVDARAGLTAADQGIAEHLRKQNKSVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + I+  S S DF+ LG+G+ + I+A +G G+   L + L   +P  + F   +      
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLTHTL---MPLSEQFPDMQVPEDEE 176

Query: 180 IEY---------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
            +                IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI   
Sbjct: 177 ADEEIDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFIP 236

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
            E ++++Y+LIDTAG+RRR    E +EKFS++KTL++I EANVV+L++DAQ+ ++ QD++
Sbjct: 237 MERDDREYVLIDTAGVRRRRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGVTDQDLS 296

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+  SGRSL+V VNKWD +  + +  IK  + ++L F+ FA  ++ISA+   N+   
Sbjct: 297 LLGFVLNSGRSLVVAVNKWDGLAKDVKDEIKRELDRRLGFIDFARLHYISALHGTNVGHL 356

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            ES+   Y+S+   ++TS +TR +  A  +H P   +  R K++YAH GG NPPIIVIHG
Sbjct: 357 FESVQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHG 416

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++K + + YKRY+  YF ++  ++
Sbjct: 417 NQVKDLPDSYKRYMMNYFRKSLKVM 441


>gi|24374819|ref|NP_718862.1| 50S ribosome assembly GTPase Der [Shewanella oneidensis MR-1]
 gi|37999695|sp|Q8EC36.1|DER_SHEON RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|24349505|gb|AAN56306.1| 50S ribosome assembly GTPase Der [Shewanella oneidensis MR-1]
          Length = 487

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/449 (43%), Positives = 287/449 (63%), Gaps = 24/449 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +     ++ E   
Sbjct: 120 IDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGIERQGEEEE 176

Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
           +   +Y                IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236

Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
           I    E + ++Y++IDTAG+RRR+K  EVIEKFSVIKTLK++ +ANVV+L++DA++ ++ 
Sbjct: 237 IYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296

Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
           QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+    
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356

Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
           +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416

Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           VIHGN++  + + YKRY+  YF R+  ++
Sbjct: 417 VIHGNQVSKLPDSYKRYMMNYFRRSLKVV 445


>gi|410663501|ref|YP_006915872.1| GTP-binding protein Der [Simiduia agarivorans SA1 = DSM 21679]
 gi|409025858|gb|AFU98142.1| GTP-binding protein Der [Simiduia agarivorans SA1 = DSM 21679]
          Length = 523

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/429 (45%), Positives = 281/429 (65%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PVL LVGRPNVGKSTLFN LT SRDALVA+Y GLTRDR YGEG +G +SF++IDTGG 
Sbjct: 1   MVPVLALVGRPNVGKSTLFNCLTRSRDALVADYAGLTRDRKYGEGEVGGRSFMVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M  Q+ QAI ESD ++F+VD + GL   D++I   LR   +P  +V NK
Sbjct: 61  SGE-EEGIDSVMAGQSLQAIEESDAVLFLVDCKAGLTPADEMIARHLRTRNKPTFVVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +  N  I+L  FYE+G+G     +A +  G++  L+ +L+        F + E   + +
Sbjct: 120 VDGTNPDIALAPFYEMGLGKIFPTTATHRKGVRAMLDAVLS-------EFPEPEAEEVET 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + +K+A+VG+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   +E +   Y LIDTAG
Sbjct: 173 PQGVKIAVVGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYINYERHGANYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR    E +EKFS++KTL++I +ANVV+LL DA + +  QD+++     E+GR+L++ 
Sbjct: 233 IRRRKNVKETVEKFSIVKTLQAIDDANVVVLLCDASEGLVEQDLHLLGHTIEAGRALVIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + ++ +KN + ++L F+ FA  ++ISA     +    +SI   Y ++   +
Sbjct: 293 LNKWDGLEDSHKEYVKNELDRRLRFIDFADIHYISAKHGTGVGHLYDSIERAYQAATEKM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ +TR L  A++ H P   +  R KLRYAH GG NPPIIVIHGN+   + + Y +YLE
Sbjct: 353 STNFLTRVLQDAVREHQPPMIRGHRIKLRYAHPGGNNPPIIVIHGNQTGELPDAYVKYLE 412

Query: 420 KYFYRTFSL 428
           + + R   L
Sbjct: 413 RTYRRALDL 421


>gi|388567418|ref|ZP_10153852.1| radical SAM protein [Hydrogenophaga sp. PBC]
 gi|388265440|gb|EIK90996.1| radical SAM protein [Hydrogenophaga sp. PBC]
          Length = 383

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 189/339 (55%), Positives = 246/339 (72%), Gaps = 6/339 (1%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF++MTDL+ SLR+KL     I+   ++S Q S DGT K
Sbjct: 20  LGEKRFRAVQLFRWIHQRGASDFSQMTDLARSLREKLPGVARIEGLKVLSRQDSADGTIK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +ETVFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNLT GEI+ QLW
Sbjct: 80  WLFDVGDGNAVETVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLTTGEILAQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             EF LR    + +N  G+R ITN+VMMGMGEPL NY + + ALK++L DHAYGLSRR V
Sbjct: 140 YAEFFLR----VFLNRPGERVITNVVMMGMGEPLQNYHALVPALKVMLDDHAYGLSRRRV 195

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+LAQ+CPV LAVSLHA  + LR+ LVP+++KYP+ EL+ AC RY+  +
Sbjct: 196 TVSTSGVVPMMDRLAQDCPVALAVSLHAPFDPLRDDLVPLNRKYPIAELLDACLRYLPAA 255

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL-TSCKINLIPFNCFPNSNLICSKNS 833
           PR  +TFEYCML G+ND   HA  L+ L+R++       K+NLIPFN FP+S L CS  +
Sbjct: 256 PRDFVTFEYCMLDGVNDQPEHAQALLRLLREHGGRGVPAKLNLIPFNPFPDSGLRCSPRA 315

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            ++ F ++L   G+  TIRK RG+DI+AACGQL+G+  D
Sbjct: 316 VVQRFGQLLNEGGVVTTIRKTRGDDIDAACGQLAGDVLD 354


>gi|241758847|ref|ZP_04756960.1| radical SAM enzyme, Cfr family [Neisseria flavescens SK114]
 gi|261380196|ref|ZP_05984769.1| radical SAM enzyme, Cfr family [Neisseria subflava NJ9703]
 gi|241321055|gb|EER57268.1| radical SAM enzyme, Cfr family [Neisseria flavescens SK114]
 gi|284797045|gb|EFC52392.1| radical SAM enzyme, Cfr family [Neisseria subflava NJ9703]
          Length = 362

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 240/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +W+H+ G  +F +MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWMHQAGAQNFEEMTDLAKSLRAKLNEQATIEVPKLMMAQESTDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSTNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|114046809|ref|YP_737359.1| GTP-binding protein EngA [Shewanella sp. MR-7]
 gi|123131595|sp|Q0HX53.1|DER_SHESR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|113888251|gb|ABI42302.1| small GTP-binding protein [Shewanella sp. MR-7]
          Length = 488

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/449 (43%), Positives = 287/449 (63%), Gaps = 24/449 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +     ++ E   
Sbjct: 120 IDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGIERQGEEEE 176

Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
           +   +Y                IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236

Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
           I    E + ++Y++IDTAG+RRR+K  EVIEKFSVIKTLK++ +ANVV+L++DA++ ++ 
Sbjct: 237 IYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296

Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
           QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+    
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356

Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
           +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416

Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           VIHGN++  + + YKRY+  YF R+  ++
Sbjct: 417 VIHGNQVSKLPDSYKRYMMNYFRRSLKVV 445


>gi|430377492|ref|ZP_19431625.1| GTP-binding protein Der [Moraxella macacae 0408225]
 gi|429540629|gb|ELA08658.1| GTP-binding protein Der [Moraxella macacae 0408225]
          Length = 467

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/430 (45%), Positives = 289/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKST+FN++T SR ALVA+  GLTRDR YG+     K+FI++DTGG 
Sbjct: 1   MKPVVALIGRPNVGKSTIFNQITKSRQALVADLAGLTRDRQYGDALFEDKAFIVVDTGGI 60

Query: 61  -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
            E +   G + + M  Q+  AI E+DI++F+VD R GLV  D++I   L   G+P+ LV 
Sbjct: 61  GEDDDGSGNIDDYMATQSYTAIHEADILVFVVDARAGLVGSDEVIAKQLHTLGKPVFLVA 120

Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           NK + ++ +   +F+ LG G P   +A +G GI N LE+ LT ++P     +K       
Sbjct: 121 NKVDGVHEASIGEFFALGFGKPFATTASHGRGITNLLEH-LTADMPSTAVEEK------- 172

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           + + +K+AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE   + Y+LIDTA
Sbjct: 173 APDGLKLAIIGRPNVGKSTLVNRLLGEERVVVFDMPGTTRDSIYIPFEREGQNYVLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR +  E +EKFSVIKTL++I +ANVV+L++DAQ+ I+ QD++I  +  ++GR++++
Sbjct: 233 GVRRRGRIDEKVEKFSVIKTLQAIKDANVVVLVIDAQEGITDQDLHILGYALDAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++  +++  +K +++++ NF+ +   + ISA+      +   SI+  Y S+++ 
Sbjct: 293 AINKWDNLDQDKKDWVKIDMERRFNFIPYVKIHLISALHGTGTGNLYPSIHKAYASAMLS 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +STSR+T+ L  A+  H P      R KLR+AH GG NPPIIV+HGN+   I N YKRYL
Sbjct: 353 ISTSRLTQILQDAVSAHQPPMVSGRRIKLRFAHMGGHNPPIIVVHGNQTGQIPNSYKRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + F L
Sbjct: 413 ENEFRKVFKL 422


>gi|218889917|ref|YP_002438781.1| GTP-binding protein EngA [Pseudomonas aeruginosa LESB58]
 gi|226741143|sp|B7UWJ2.1|DER_PSEA8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|218770140|emb|CAW25902.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa LESB58]
          Length = 493

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/445 (44%), Positives = 287/445 (64%), Gaps = 17/445 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R G+   D++I   LRK  +   L+ NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLIANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
            + I+  ++  +F  LG+G+   I+A +G GI + L+  L I            E   ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNVEEEGEGEPASEE 179

Query: 168 FFKKKEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
             + +E T I      + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI   
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
           FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   D+N
Sbjct: 240 FERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+ E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +   
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            +S+   + S++    TSR+T  L  A++ H P      R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  +   Y RYLEK + R   L+
Sbjct: 420 NQVDAVPKAYTRYLEKTYRRVLKLV 444


>gi|307543972|ref|YP_003896451.1| GTP-binding protein EngA [Halomonas elongata DSM 2581]
 gi|307215996|emb|CBV41266.1| GTP-binding protein EngA [Halomonas elongata DSM 2581]
          Length = 467

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 193/429 (44%), Positives = 282/429 (65%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K++ +IDTGG 
Sbjct: 1   MNPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGGKAYTVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+ QAI E+DI++F+VDGR GL   D+ I N LR + +   LV+NK
Sbjct: 61  SGD-EEGIDAAMAEQSLQAIDEADIVLFMVDGRSGLNVADEAIANHLRVNQKKTWLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +   S   DF++LGIG P  I+A +G  + + +E +L    P+ +  +  +      
Sbjct: 120 TDGLEEHSAMADFWQLGIGEPRSIAAAHGRNVTSLIEEVLD---PFPE--RDPDIPADTG 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I + ++G+PNVGKSTL+N LLGE+RV+ +D  GTTRD+I+  FE   K Y+L+DTAG
Sbjct: 175 ASGIHIGVIGRPNVGKSTLVNRLLGEDRVVVFDEAGTTRDAIEIPFERRGKPYVLVDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    EV EKFS+IKTL++I E +V +++LDA+  +  QD+++ +++  SGR+L++ 
Sbjct: 235 VRRRKNVREVAEKFSIIKTLEAIKECHVAVMVLDARSGLVEQDLHLLDYVLTSGRALVLA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD + H  ++ ++  IK++L F  +A  +FISA+    +     SI   ++S+  H 
Sbjct: 295 VNKWDGLEHEAKEKMRAEIKRRLGFADYAELHFISALHGTAVGDLYPSIERAFESANSHW 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+T  L  A++ H P      R KLR AHQGG NPPIIV+HGN+   +   YKRYL 
Sbjct: 355 STNRLTNILRDAVEQHQPPMIHGRRIKLRMAHQGGTNPPIIVVHGNQTDSLPEAYKRYLT 414

Query: 420 KYFYRTFSL 428
             F +   +
Sbjct: 415 NTFRKVLKV 423


>gi|15677174|ref|NP_274327.1| hypothetical protein NMB1308 [Neisseria meningitidis MC58]
 gi|385341775|ref|YP_005895646.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M01-240149]
 gi|385853062|ref|YP_005899576.1| radical SAM enzyme, Cfr family [Neisseria meningitidis H44/76]
 gi|385857379|ref|YP_005903891.1| radical SAM enzyme, Cfr family [Neisseria meningitidis NZ-05/33]
 gi|416170615|ref|ZP_11608367.1| radical SAM enzyme, Cfr family [Neisseria meningitidis OX99.30304]
 gi|416187679|ref|ZP_11614291.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M0579]
 gi|416196373|ref|ZP_11618143.1| radical SAM enzyme, Cfr family [Neisseria meningitidis CU385]
 gi|418288492|ref|ZP_12900973.1| radical SAM enzyme, Cfr family [Neisseria meningitidis NM233]
 gi|418290737|ref|ZP_12902857.1| radical SAM enzyme, Cfr family [Neisseria meningitidis NM220]
 gi|421540565|ref|ZP_15986710.1| 23S rRNA methyltransferase [Neisseria meningitidis 93004]
 gi|421559264|ref|ZP_16005139.1| 23S rRNA methyltransferase [Neisseria meningitidis 92045]
 gi|421567660|ref|ZP_16013394.1| 23S rRNA methyltransferase [Neisseria meningitidis NM3001]
 gi|427827981|ref|ZP_18995000.1| radical SAM enzyme, Cfr family [Neisseria meningitidis H44/76]
 gi|433465256|ref|ZP_20422738.1| 23S rRNA methyltransferase [Neisseria meningitidis NM422]
 gi|433488593|ref|ZP_20445755.1| 23S rRNA methyltransferase [Neisseria meningitidis M13255]
 gi|433490636|ref|ZP_20447762.1| 23S rRNA methyltransferase [Neisseria meningitidis NM418]
 gi|433504965|ref|ZP_20461904.1| 23S rRNA methyltransferase [Neisseria meningitidis 9506]
 gi|433507319|ref|ZP_20464227.1| 23S rRNA methyltransferase [Neisseria meningitidis 9757]
 gi|433509250|ref|ZP_20466119.1| 23S rRNA methyltransferase [Neisseria meningitidis 12888]
 gi|433511525|ref|ZP_20468352.1| 23S rRNA methyltransferase [Neisseria meningitidis 4119]
 gi|81784539|sp|Q9JZ42.1|RLMN_NEIMB RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|7226549|gb|AAF41683.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316984107|gb|EFV63085.1| radical SAM enzyme, Cfr family [Neisseria meningitidis H44/76]
 gi|325130328|gb|EGC53094.1| radical SAM enzyme, Cfr family [Neisseria meningitidis OX99.30304]
 gi|325136188|gb|EGC58796.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M0579]
 gi|325140467|gb|EGC62988.1| radical SAM enzyme, Cfr family [Neisseria meningitidis CU385]
 gi|325200066|gb|ADY95521.1| radical SAM enzyme, Cfr family [Neisseria meningitidis H44/76]
 gi|325201981|gb|ADY97435.1| radical SAM enzyme, Cfr family [Neisseria meningitidis M01-240149]
 gi|325208268|gb|ADZ03720.1| radical SAM enzyme, Cfr family [Neisseria meningitidis NZ-05/33]
 gi|372201111|gb|EHP15078.1| radical SAM enzyme, Cfr family [Neisseria meningitidis NM220]
 gi|372201790|gb|EHP15672.1| radical SAM enzyme, Cfr family [Neisseria meningitidis NM233]
 gi|402318719|gb|EJU54235.1| 23S rRNA methyltransferase [Neisseria meningitidis 93004]
 gi|402336659|gb|EJU71919.1| 23S rRNA methyltransferase [Neisseria meningitidis 92045]
 gi|402343693|gb|EJU78839.1| 23S rRNA methyltransferase [Neisseria meningitidis NM3001]
 gi|432203200|gb|ELK59254.1| 23S rRNA methyltransferase [Neisseria meningitidis NM422]
 gi|432223426|gb|ELK79207.1| 23S rRNA methyltransferase [Neisseria meningitidis M13255]
 gi|432227627|gb|ELK83336.1| 23S rRNA methyltransferase [Neisseria meningitidis NM418]
 gi|432241090|gb|ELK96620.1| 23S rRNA methyltransferase [Neisseria meningitidis 9506]
 gi|432241684|gb|ELK97213.1| 23S rRNA methyltransferase [Neisseria meningitidis 9757]
 gi|432246638|gb|ELL02084.1| 23S rRNA methyltransferase [Neisseria meningitidis 12888]
 gi|432247573|gb|ELL03010.1| 23S rRNA methyltransferase [Neisseria meningitidis 4119]
          Length = 364

 Score =  395 bits (1014), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +F++MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFDEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L+        CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVTD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|192362315|ref|YP_001981972.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107]
 gi|238692428|sp|B3PDM5.1|DER_CELJU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|190688480|gb|ACE86158.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107]
          Length = 466

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/431 (46%), Positives = 286/431 (66%), Gaps = 12/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTNSRDALVA+YPGLTRDR YGE  +  + FI+IDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRLTNSRDALVADYPGLTRDRKYGEARLENRRFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M  Q+  AI E+DI++FIVD R GL   D+LI   LR   +   +V NK
Sbjct: 61  SGE-EEGIDSAMAGQSLLAIQEADIVLFIVDSRVGLNPADELIARHLRVHNKKTYVVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
            + ++  I+L  FYELG+G  H  +A +G G+++ +E++L    E+P ++  ++ E T I
Sbjct: 120 IDGMDPDIALAPFYELGMGEVHPTTATHGRGVRSLMEDVLAEYPEIPEEE--QQGEATGI 177

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                 K+AIVG+PNVGKSTL+N LLGE+RV+ YD PGTTRDSI   +   +K Y LIDT
Sbjct: 178 ------KIAIVGRPNVGKSTLVNRLLGEDRVVVYDQPGTTRDSIYINYTRFDKPYTLIDT 231

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR      +EKFS++KT+++I +ANVVIL++DA + I  QD+++     E+GR+L+
Sbjct: 232 AGVRRRKNIDLAVEKFSIVKTMQAIADANVVILVMDASEGIVEQDLHLMGTAIEAGRALV 291

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + +NKWD +  + +  +KN ++++L F+ FA  +FISA+    + +  +SI   Y S+  
Sbjct: 292 IALNKWDGLDESHKYYVKNELERRLRFVDFANIHFISALHGTGVGNLYKSIEQAYQSATD 351

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
             ST+ +TR L  A++ H P      R KLRYAH GG NPP+I++HGN+   +   Y +Y
Sbjct: 352 RFSTNYLTRILQDAVREHQPPMINGRRIKLRYAHPGGHNPPVIIVHGNQTDDVPGHYVKY 411

Query: 418 LEKYFYRTFSL 428
           LEK + R   L
Sbjct: 412 LEKTYRRVLDL 422


>gi|259907722|ref|YP_002648078.1| GTP-binding protein EngA [Erwinia pyrifoliae Ep1/96]
 gi|385785498|ref|YP_005816607.1| GTP-binding protein EngA [Erwinia sp. Ejp617]
 gi|387870493|ref|YP_005801863.1| GTP-binding protein engA [Erwinia pyrifoliae DSM 12163]
 gi|224963344|emb|CAX54829.1| GTP-binding protein [Erwinia pyrifoliae Ep1/96]
 gi|283477576|emb|CAY73492.1| GTP-binding protein engA [Erwinia pyrifoliae DSM 12163]
 gi|310764770|gb|ADP09720.1| GTP-binding protein EngA [Erwinia sp. Ejp617]
          Length = 498

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/460 (44%), Positives = 292/460 (63%), Gaps = 35/460 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I  + FI IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M +Q+  AI E+D+++F+VD R GL+  D  I   LR   +P  +V NK
Sbjct: 61  DGN-EEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADVAIAKHLRSRQKPTFIVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
           ++ +++ S  +DF+ LG+G  H I+A +G G+ + LE +L   LP+              
Sbjct: 120 TDGLDADSAVVDFWSLGLGEIHPIAASHGRGVTSLLELVL---LPWMDEVAPERELTEEE 176

Query: 170 -------------------KKKEFTNIHSIEY-IKVAIVGKPNVGKSTLINSLLGENRVI 209
                              +  E  + + ++  IK+AIVG+PNVGKSTL N +LGE+RV+
Sbjct: 177 ENEAYWAALAAKEAKANGEETAEEDDFNPLDLPIKLAIVGRPNVGKSTLTNRILGEDRVV 236

Query: 210 TYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVI 269
            +D PGTTRDSI    E + ++YILIDTAG+R+R K  E +EKFSVIKTLK+I +ANVV+
Sbjct: 237 VFDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLKAIEDANVVM 296

Query: 270 LLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAM 329
           L++DA + IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA 
Sbjct: 297 LVIDAHEGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKEALDYRLGFIDFAR 356

Query: 330 FNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRY 389
            +FISA+  + + +  ES+   YD S   ++TS +TR +  A  +H P   +  R KL+Y
Sbjct: 357 IHFISALHGSGVGNLFESVTEAYDCSTRRVNTSMLTRIMHMAADDHQPPLVRSRRVKLKY 416

Query: 390 AHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           AH GG NPPI+VIHGN++K + + YKRYL  YF R+  ++
Sbjct: 417 AHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLDIM 456


>gi|93005486|ref|YP_579923.1| GTP-binding protein EngA [Psychrobacter cryohalolentis K5]
 gi|122415786|sp|Q1QD14.1|DER_PSYCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|92393164|gb|ABE74439.1| Small GTP-binding protein domain protein [Psychrobacter
           cryohalolentis K5]
          Length = 480

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/485 (41%), Positives = 309/485 (63%), Gaps = 18/485 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           +KPV+ L+GRPNVGKSTLFN+ T SR ALVA+  GLTRDR YG+     K+FI++DTGG 
Sbjct: 3   IKPVVALIGRPNVGKSTLFNQFTKSRQALVADLSGLTRDRQYGDATYEDKAFIVVDTGGI 62

Query: 61  -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
            E +  +G + + M++Q+  AI E+DII+F+VD R G++  D  I  FL   G+P+ +V 
Sbjct: 63  GEADDGRGDIDDYMSEQSYTAIHEADIIVFVVDARAGMIGADAEIGKFLHTLGKPVYVVA 122

Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           NK + ++ S   +FY LG+G P+ ++A +G G+ N LE +LT ++P ++        N+ 
Sbjct: 123 NKVDGVHDSAPAEFYALGLGEPYPMAASHGRGVGNLLE-VLTADMPSQE--------NVV 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   +    K Y+LIDTA
Sbjct: 174 EPRGLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPYTREGKDYVLIDTA 233

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E +EKFSVIKTL++I ++NV ++++DA + I  QD+++  +  ++GR+L+V
Sbjct: 234 GVRRRGKIDEKVEKFSVIKTLQAIEDSNVTVIVIDAHEGIVDQDLHMIGYALDAGRALVV 293

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +  +Q+  IK  + ++ NF+ +   + ISA+    + +   SI   Y SS+  
Sbjct: 294 AINKWDGLTADQKNYIKIEMDRRFNFIPYVKVHQISALHGTGVGNLYPSILRAYQSSMFE 353

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST+R+T+ L  A+  +PP      R KLRYAH GG NPP+IVIHGN+   +   Y+RYL
Sbjct: 354 VSTNRLTQILQDAVTANPPPTVAGRRIKLRYAHIGGHNPPVIVIHGNQTGSLPKSYQRYL 413

Query: 419 EKYFYRTFSLIDALEKNIVGEI----YNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNR 474
           E  F + F L +    N+V ++    Y        K     +++  +N  +KF +  K++
Sbjct: 414 ENQFRQVFKL-EGTPLNVVFKLNENPYANKSDTPTKAKTQQLRQRERNRAQKFTT--KDK 470

Query: 475 PFFKN 479
           P F N
Sbjct: 471 PRFTN 475


>gi|375264590|ref|YP_005022033.1| GTP-binding protein Der [Vibrio sp. EJY3]
 gi|369839914|gb|AEX21058.1| GTP-binding protein Der [Vibrio sp. EJY3]
          Length = 498

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/457 (43%), Positives = 299/457 (65%), Gaps = 29/457 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G++  FI+IDTGG
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEEHEFIVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
            +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LRK  +P +LV+N
Sbjct: 61  IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119

Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
           K + I++  +  DF++LG+ + + I+A +G G+   LE        ++L  E    +   
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLGSESEEGEIED 179

Query: 171 KKEFTNIHSI------------------EYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
             EF +   +                  + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDAEILEEEYSEEEAEQEFQRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD + ++ ++ +K  + ++L F+ FA  +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNDVKENVKKELDRRLGFVDFARIHF 359

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ESI   Y S+   + TS +TR +  A+ +H P   +  R KL+YAH 
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMAVDDHQPPMIRGRRIKLKYAHA 419

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN ++ + + YKRYL  YF ++  ++
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYLMNYFRKSLEIM 456


>gi|255067157|ref|ZP_05319012.1| radical SAM enzyme, Cfr family [Neisseria sicca ATCC 29256]
 gi|255048525|gb|EET43989.1| radical SAM enzyme, Cfr family [Neisseria sicca ATCC 29256]
          Length = 364

 Score =  394 bits (1012), Expect = e-106,   Method: Composition-based stats.
 Identities = 185/344 (53%), Positives = 240/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +WIH+ G   F++MTDL+ SLR KL     +  P +M  Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWIHQAGAQSFDEMTDLAKSLRLKLNEQASVDVPKLMMAQESTDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+++ + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFENVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGVNDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSTNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|349611007|ref|ZP_08890323.1| ribosomal RNA large subunit methyltransferase N [Neisseria sp.
           GT4A_CT1]
 gi|348615037|gb|EGY64569.1| ribosomal RNA large subunit methyltransferase N [Neisseria sp.
           GT4A_CT1]
          Length = 364

 Score =  394 bits (1012), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 239/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +WIH+ G   F++MTDL+ SLR KL     +  P +M  Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWIHQAGAQSFDEMTDLAKSLRLKLNEQASVDVPKLMMAQESTDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSTNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|340362818|ref|ZP_08685184.1| cfr family radical SAM enzyme [Neisseria macacae ATCC 33926]
 gi|339886976|gb|EGQ76579.1| cfr family radical SAM enzyme [Neisseria macacae ATCC 33926]
          Length = 364

 Score =  394 bits (1012), Expect = e-106,   Method: Composition-based stats.
 Identities = 185/344 (53%), Positives = 240/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +WIH+ G   F++MTDL+ SLR KL     +  P +M  Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWIHQAGAQSFDEMTDLAKSLRLKLNEQASVDVPKLMMAQESADGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+++ + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFENVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGVNDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSTNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|91792618|ref|YP_562269.1| GTP-binding protein EngA [Shewanella denitrificans OS217]
 gi|122968866|sp|Q12PT0.1|DER_SHEDO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|91714620|gb|ABE54546.1| Small GTP-binding protein domain [Shewanella denitrificans OS217]
          Length = 491

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/450 (44%), Positives = 285/450 (63%), Gaps = 25/450 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DGS-EEGIETKMAEQSLAAIEEADVVLFLTDARAGLTSADLAIAQHLRSRDKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + I++ S+  +F+ LG+G  + ++A  G G+ N +E  L    PY +        +  +
Sbjct: 120 VDGIDADSVCGEFWALGLGEVYQMAAAQGRGVTNMIEYALA---PYAEAMGLNRDDDEQA 176

Query: 180 IEY--------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
           IE                     IK+AI+GKPNVGKSTLIN +LGE RV+ YD PGTTRD
Sbjct: 177 IEEEREYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLINRILGEERVVVYDAPGTTRD 236

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI    E   ++Y+LIDTAG+RRR+K  EVIEKFSVIKTLK++ +ANVV+L++DA++ I+
Sbjct: 237 SIYIPMEREGREYVLIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLVVDAREGIA 296

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+   
Sbjct: 297 EQDLGLLGFTLNAGRALVIAVNKWDGIDQTVKDRVKSELDRRLGFIDFAKIHFISALHGT 356

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPPI
Sbjct: 357 GVGHLYESIEEAYDSATRRVSTSMLTRVMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPI 416

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           IV+HGN++  + + YKRY+  YF R+  ++
Sbjct: 417 IVVHGNQVSKLPDSYKRYMMNYFRRSLKVV 446


>gi|261365781|ref|ZP_05978664.1| radical SAM enzyme, Cfr family [Neisseria mucosa ATCC 25996]
 gi|288565687|gb|EFC87247.1| radical SAM enzyme, Cfr family [Neisseria mucosa ATCC 25996]
          Length = 364

 Score =  394 bits (1012), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 239/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +WIH+ G   F++MTDL+ SLR KL     +  P +M  Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWIHQAGAQSFDEMTDLAKSLRLKLNEQASVDVPKLMMAQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSTNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|385328576|ref|YP_005882879.1| hypothetical protein NMBB_1442 [Neisseria meningitidis alpha710]
 gi|308389428|gb|ADO31748.1| hypothetical protein NMBB_1442 [Neisseria meningitidis alpha710]
          Length = 364

 Score =  394 bits (1012), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +F++MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFDEMTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTSAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L+        CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGINDKAQHARELIELVTD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|15640782|ref|NP_230412.1| GTP-binding protein EngA [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121585667|ref|ZP_01675462.1| GTP-binding protein [Vibrio cholerae 2740-80]
 gi|121726039|ref|ZP_01679338.1| GTP-binding protein [Vibrio cholerae V52]
 gi|147675115|ref|YP_001216248.1| GTP-binding protein EngA [Vibrio cholerae O395]
 gi|153817276|ref|ZP_01969943.1| GTP-binding protein [Vibrio cholerae NCTC 8457]
 gi|153821375|ref|ZP_01974042.1| GTP-binding protein [Vibrio cholerae B33]
 gi|227080942|ref|YP_002809493.1| GTP-binding protein EngA [Vibrio cholerae M66-2]
 gi|227117137|ref|YP_002819033.1| GTP-binding protein [Vibrio cholerae O395]
 gi|229505623|ref|ZP_04395133.1| GTP-binding protein EngA [Vibrio cholerae BX 330286]
 gi|229510705|ref|ZP_04400184.1| GTP-binding protein EngA [Vibrio cholerae B33]
 gi|229517827|ref|ZP_04407271.1| GTP-binding protein EngA [Vibrio cholerae RC9]
 gi|229608641|ref|YP_002879289.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236]
 gi|254847900|ref|ZP_05237250.1| GTP-binding protein EngA [Vibrio cholerae MO10]
 gi|255744569|ref|ZP_05418520.1| GTP-binding protein EngA [Vibrio cholera CIRS 101]
 gi|262161296|ref|ZP_06030407.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1]
 gi|262168789|ref|ZP_06036484.1| GTP-binding protein EngA [Vibrio cholerae RC27]
 gi|298499104|ref|ZP_07008911.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757]
 gi|360034670|ref|YP_004936433.1| GTP-binding protein EngA [Vibrio cholerae O1 str. 2010EL-1786]
 gi|379740610|ref|YP_005332579.1| GTP-binding protein Der [Vibrio cholerae IEC224]
 gi|417812806|ref|ZP_12459463.1| GTPase Der [Vibrio cholerae HC-49A2]
 gi|417815671|ref|ZP_12462303.1| GTPase Der [Vibrio cholerae HCUF01]
 gi|418331805|ref|ZP_12942745.1| GTPase Der [Vibrio cholerae HC-06A1]
 gi|418336569|ref|ZP_12945467.1| GTPase Der [Vibrio cholerae HC-23A1]
 gi|418343062|ref|ZP_12949856.1| GTPase Der [Vibrio cholerae HC-28A1]
 gi|418348231|ref|ZP_12952965.1| GTPase Der [Vibrio cholerae HC-43A1]
 gi|418354767|ref|ZP_12957488.1| GTPase Der [Vibrio cholerae HC-61A1]
 gi|419825223|ref|ZP_14348728.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1033(6)]
 gi|421316576|ref|ZP_15767147.1| GTPase Der [Vibrio cholerae CP1032(5)]
 gi|421320401|ref|ZP_15770958.1| GTPase Der [Vibrio cholerae CP1038(11)]
 gi|421324397|ref|ZP_15774923.1| GTPase Der [Vibrio cholerae CP1041(14)]
 gi|421328058|ref|ZP_15778572.1| GTPase Der [Vibrio cholerae CP1042(15)]
 gi|421331076|ref|ZP_15781556.1| GTPase Der [Vibrio cholerae CP1046(19)]
 gi|421334651|ref|ZP_15785118.1| GTPase Der [Vibrio cholerae CP1048(21)]
 gi|421338544|ref|ZP_15788979.1| GTPase Der [Vibrio cholerae HC-20A2]
 gi|421347329|ref|ZP_15797711.1| GTPase Der [Vibrio cholerae HC-46A1]
 gi|422890866|ref|ZP_16933274.1| GTPase Der [Vibrio cholerae HC-40A1]
 gi|422901741|ref|ZP_16937101.1| GTPase Der [Vibrio cholerae HC-48A1]
 gi|422905966|ref|ZP_16940808.1| GTPase Der [Vibrio cholerae HC-70A1]
 gi|422912561|ref|ZP_16947084.1| GTPase Der [Vibrio cholerae HFU-02]
 gi|422925042|ref|ZP_16958071.1| GTPase Der [Vibrio cholerae HC-38A1]
 gi|423144362|ref|ZP_17131975.1| GTPase Der [Vibrio cholerae HC-19A1]
 gi|423149014|ref|ZP_17136372.1| GTPase Der [Vibrio cholerae HC-21A1]
 gi|423152859|ref|ZP_17140056.1| GTPase Der [Vibrio cholerae HC-22A1]
 gi|423155668|ref|ZP_17142776.1| GTPase Der [Vibrio cholerae HC-32A1]
 gi|423159499|ref|ZP_17146470.1| GTPase Der [Vibrio cholerae HC-33A2]
 gi|423164186|ref|ZP_17150971.1| GTPase Der [Vibrio cholerae HC-48B2]
 gi|423730318|ref|ZP_17703635.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A1]
 gi|423749162|ref|ZP_17711649.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-50A2]
 gi|423892036|ref|ZP_17725722.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62A1]
 gi|423926811|ref|ZP_17730338.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-77A1]
 gi|424001366|ref|ZP_17744454.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A2]
 gi|424005522|ref|ZP_17748505.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-37A1]
 gi|424023533|ref|ZP_17763196.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62B1]
 gi|424026336|ref|ZP_17765951.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-69A1]
 gi|424585661|ref|ZP_18025254.1| GTPase Der [Vibrio cholerae CP1030(3)]
 gi|424590001|ref|ZP_18029447.1| GTPase Der [Vibrio cholerae CP1037(10)]
 gi|424594357|ref|ZP_18033694.1| GTPase Der [Vibrio cholerae CP1040(13)]
 gi|424598222|ref|ZP_18037419.1| GTPase Der [Vibrio Cholerae CP1044(17)]
 gi|424600975|ref|ZP_18040131.1| GTPase Der [Vibrio cholerae CP1047(20)]
 gi|424605955|ref|ZP_18044919.1| GTPase Der [Vibrio cholerae CP1050(23)]
 gi|424609788|ref|ZP_18048645.1| GTPase Der [Vibrio cholerae HC-39A1]
 gi|424612591|ref|ZP_18051397.1| GTPase Der [Vibrio cholerae HC-41A1]
 gi|424616412|ref|ZP_18055102.1| GTPase Der [Vibrio cholerae HC-42A1]
 gi|424621350|ref|ZP_18059877.1| GTPase Der [Vibrio cholerae HC-47A1]
 gi|424644327|ref|ZP_18082080.1| GTPase Der [Vibrio cholerae HC-56A2]
 gi|424651971|ref|ZP_18089492.1| GTPase Der [Vibrio cholerae HC-57A2]
 gi|424655918|ref|ZP_18093219.1| GTPase Der [Vibrio cholerae HC-81A2]
 gi|440709050|ref|ZP_20889708.1| GTP-binding protein EngA [Vibrio cholerae 4260B]
 gi|443502864|ref|ZP_21069852.1| GTPase Der [Vibrio cholerae HC-64A1]
 gi|443506777|ref|ZP_21073566.1| GTPase Der [Vibrio cholerae HC-65A1]
 gi|443510884|ref|ZP_21077547.1| GTPase Der [Vibrio cholerae HC-67A1]
 gi|443514446|ref|ZP_21080984.1| GTPase Der [Vibrio cholerae HC-68A1]
 gi|443518259|ref|ZP_21084675.1| GTPase Der [Vibrio cholerae HC-71A1]
 gi|443523126|ref|ZP_21089365.1| GTPase Der [Vibrio cholerae HC-72A2]
 gi|443530758|ref|ZP_21096773.1| GTPase Der [Vibrio cholerae HC-7A1]
 gi|443534515|ref|ZP_21100426.1| GTPase Der [Vibrio cholerae HC-80A1]
 gi|443538107|ref|ZP_21103962.1| GTPase Der [Vibrio cholerae HC-81A1]
 gi|449056713|ref|ZP_21735381.1| GTP-binding protein EngA [Vibrio cholerae O1 str. Inaba G4222]
 gi|26006742|sp|Q9KTW7.1|DER_VIBCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|172047436|sp|A5F3E6.1|DER_VIBC3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|254783177|sp|C3LT16.1|DER_VIBCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|9655209|gb|AAF93928.1| GTP-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121550030|gb|EAX60046.1| GTP-binding protein [Vibrio cholerae 2740-80]
 gi|121631521|gb|EAX63891.1| GTP-binding protein [Vibrio cholerae V52]
 gi|126512192|gb|EAZ74786.1| GTP-binding protein [Vibrio cholerae NCTC 8457]
 gi|126521085|gb|EAZ78308.1| GTP-binding protein [Vibrio cholerae B33]
 gi|146316998|gb|ABQ21537.1| GTP-binding protein [Vibrio cholerae O395]
 gi|227008830|gb|ACP05042.1| GTP-binding protein [Vibrio cholerae M66-2]
 gi|227012587|gb|ACP08797.1| GTP-binding protein [Vibrio cholerae O395]
 gi|229344542|gb|EEO09516.1| GTP-binding protein EngA [Vibrio cholerae RC9]
 gi|229350670|gb|EEO15611.1| GTP-binding protein EngA [Vibrio cholerae B33]
 gi|229357846|gb|EEO22763.1| GTP-binding protein EngA [Vibrio cholerae BX 330286]
 gi|229371296|gb|ACQ61719.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236]
 gi|254843605|gb|EET22019.1| GTP-binding protein EngA [Vibrio cholerae MO10]
 gi|255737600|gb|EET92994.1| GTP-binding protein EngA [Vibrio cholera CIRS 101]
 gi|262022907|gb|EEY41613.1| GTP-binding protein EngA [Vibrio cholerae RC27]
 gi|262029046|gb|EEY47699.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1]
 gi|297543437|gb|EFH79487.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757]
 gi|340041397|gb|EGR02363.1| GTPase Der [Vibrio cholerae HCUF01]
 gi|340042110|gb|EGR03075.1| GTPase Der [Vibrio cholerae HC-49A2]
 gi|341624726|gb|EGS50210.1| GTPase Der [Vibrio cholerae HC-70A1]
 gi|341625943|gb|EGS51364.1| GTPase Der [Vibrio cholerae HC-48A1]
 gi|341626538|gb|EGS51911.1| GTPase Der [Vibrio cholerae HC-40A1]
 gi|341640347|gb|EGS64937.1| GTPase Der [Vibrio cholerae HFU-02]
 gi|341648039|gb|EGS72106.1| GTPase Der [Vibrio cholerae HC-38A1]
 gi|356419967|gb|EHH73497.1| GTPase Der [Vibrio cholerae HC-06A1]
 gi|356420915|gb|EHH74423.1| GTPase Der [Vibrio cholerae HC-21A1]
 gi|356425764|gb|EHH79110.1| GTPase Der [Vibrio cholerae HC-19A1]
 gi|356432147|gb|EHH85344.1| GTPase Der [Vibrio cholerae HC-23A1]
 gi|356433750|gb|EHH86935.1| GTPase Der [Vibrio cholerae HC-22A1]
 gi|356437500|gb|EHH90589.1| GTPase Der [Vibrio cholerae HC-28A1]
 gi|356442569|gb|EHH95408.1| GTPase Der [Vibrio cholerae HC-32A1]
 gi|356446970|gb|EHH99760.1| GTPase Der [Vibrio cholerae HC-43A1]
 gi|356449798|gb|EHI02536.1| GTPase Der [Vibrio cholerae HC-33A2]
 gi|356453169|gb|EHI05832.1| GTPase Der [Vibrio cholerae HC-61A1]
 gi|356456131|gb|EHI08742.1| GTPase Der [Vibrio cholerae HC-48B2]
 gi|356645824|gb|AET25879.1| GTP-binding protein EngA [Vibrio cholerae O1 str. 2010EL-1786]
 gi|378794120|gb|AFC57591.1| GTP-binding protein Der [Vibrio cholerae IEC224]
 gi|395920067|gb|EJH30889.1| GTPase Der [Vibrio cholerae CP1041(14)]
 gi|395921533|gb|EJH32353.1| GTPase Der [Vibrio cholerae CP1032(5)]
 gi|395923383|gb|EJH34194.1| GTPase Der [Vibrio cholerae CP1038(11)]
 gi|395929564|gb|EJH40313.1| GTPase Der [Vibrio cholerae CP1042(15)]
 gi|395932340|gb|EJH43083.1| GTPase Der [Vibrio cholerae CP1046(19)]
 gi|395936512|gb|EJH47235.1| GTPase Der [Vibrio cholerae CP1048(21)]
 gi|395943492|gb|EJH54166.1| GTPase Der [Vibrio cholerae HC-20A2]
 gi|395946389|gb|EJH57053.1| GTPase Der [Vibrio cholerae HC-46A1]
 gi|395961840|gb|EJH72150.1| GTPase Der [Vibrio cholerae HC-56A2]
 gi|395963277|gb|EJH73549.1| GTPase Der [Vibrio cholerae HC-57A2]
 gi|395965959|gb|EJH76095.1| GTPase Der [Vibrio cholerae HC-42A1]
 gi|395974215|gb|EJH83748.1| GTPase Der [Vibrio cholerae HC-47A1]
 gi|395977209|gb|EJH86628.1| GTPase Der [Vibrio cholerae CP1030(3)]
 gi|395978642|gb|EJH88017.1| GTPase Der [Vibrio cholerae CP1047(20)]
 gi|408009248|gb|EKG47163.1| GTPase Der [Vibrio cholerae HC-39A1]
 gi|408016028|gb|EKG53589.1| GTPase Der [Vibrio cholerae HC-41A1]
 gi|408035824|gb|EKG72279.1| GTPase Der [Vibrio cholerae CP1037(10)]
 gi|408036560|gb|EKG72985.1| GTPase Der [Vibrio cholerae CP1040(13)]
 gi|408044449|gb|EKG80367.1| GTPase Der [Vibrio Cholerae CP1044(17)]
 gi|408046043|gb|EKG81764.1| GTPase Der [Vibrio cholerae CP1050(23)]
 gi|408056517|gb|EKG91395.1| GTPase Der [Vibrio cholerae HC-81A2]
 gi|408610760|gb|EKK84125.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1033(6)]
 gi|408626831|gb|EKK99665.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A1]
 gi|408639980|gb|EKL11782.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-50A2]
 gi|408657812|gb|EKL28888.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-77A1]
 gi|408658868|gb|EKL29926.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62A1]
 gi|408847957|gb|EKL88013.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-37A1]
 gi|408848885|gb|EKL88921.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A2]
 gi|408872901|gb|EKM12109.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62B1]
 gi|408880923|gb|EKM19838.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-69A1]
 gi|439975350|gb|ELP51473.1| GTP-binding protein EngA [Vibrio cholerae 4260B]
 gi|443432761|gb|ELS75283.1| GTPase Der [Vibrio cholerae HC-64A1]
 gi|443436586|gb|ELS82704.1| GTPase Der [Vibrio cholerae HC-65A1]
 gi|443440148|gb|ELS89838.1| GTPase Der [Vibrio cholerae HC-67A1]
 gi|443444242|gb|ELS97517.1| GTPase Der [Vibrio cholerae HC-68A1]
 gi|443448080|gb|ELT04716.1| GTPase Der [Vibrio cholerae HC-71A1]
 gi|443450854|gb|ELT11119.1| GTPase Der [Vibrio cholerae HC-72A2]
 gi|443457841|gb|ELT25237.1| GTPase Der [Vibrio cholerae HC-7A1]
 gi|443462299|gb|ELT33339.1| GTPase Der [Vibrio cholerae HC-80A1]
 gi|443465696|gb|ELT40355.1| GTPase Der [Vibrio cholerae HC-81A1]
 gi|448263881|gb|EMB01121.1| GTP-binding protein EngA [Vibrio cholerae O1 str. Inaba G4222]
          Length = 494

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/456 (42%), Positives = 297/456 (65%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+A +G G+   ++ +L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|365540816|ref|ZP_09365991.1| GTP-binding protein Der [Vibrio ordalii ATCC 33509]
          Length = 495

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/454 (43%), Positives = 295/454 (64%), Gaps = 26/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D++I   LRK  +  +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEMIAQHLRKIEKRAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL------TIELPYKKFFKKKE 173
            + I++ + S +F++LG+   + I+A +G G+   ++  L       IE    +     E
Sbjct: 120 VDGIDADAASAEFWQLGVDQMYQIAAAHGRGVGILIDRALNPLAEEMIEQAEGEIEDLSE 179

Query: 174 FTNIHS--IEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
           F +     ++Y                IK+AI+G+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 FEDAEEEKLDYTEEEAEAEYKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 239

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI      + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA+
Sbjct: 240 TTRDSIYIPMMRDEREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVLLVIDAR 299

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           +NIS QD+++  F   SGRS+++ VNKWD + ++ ++ +K  + ++L F+ FA  +FISA
Sbjct: 300 ENISDQDLSLLGFALNSGRSIVLAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFISA 359

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ES+   Y S+   + TS +TR L  A  +H P   +  R KL+YAH GG 
Sbjct: 360 LHGTGVGHLFESVQEAYKSATTRVGTSVLTRILKMATDDHQPPMVRSRRVKLKYAHAGGY 419

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPIIV+HGN +  + + YKRYL  Y+ ++  ++
Sbjct: 420 NPPIIVVHGNLVNELPDSYKRYLMNYYRKSLEIM 453


>gi|59801026|ref|YP_207738.1| hypothetical protein NGO0596 [Neisseria gonorrhoeae FA 1090]
 gi|194098883|ref|YP_002001947.1| hypothetical protein NGK_1322 [Neisseria gonorrhoeae NCCP11945]
 gi|240013924|ref|ZP_04720837.1| hypothetical protein NgonD_04618 [Neisseria gonorrhoeae DGI18]
 gi|240016366|ref|ZP_04722906.1| hypothetical protein NgonFA_04214 [Neisseria gonorrhoeae FA6140]
 gi|240121493|ref|ZP_04734455.1| hypothetical protein NgonPI_06948 [Neisseria gonorrhoeae PID24-1]
 gi|254493940|ref|ZP_05107111.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268594999|ref|ZP_06129166.1| ribosomal RNA large subunit methyltransferase N [Neisseria
           gonorrhoeae 35/02]
 gi|268596621|ref|ZP_06130788.1| ribosomal RNA large subunit methyltransferase N [Neisseria
           gonorrhoeae FA19]
 gi|268599227|ref|ZP_06133394.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268603913|ref|ZP_06138080.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268682376|ref|ZP_06149238.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684534|ref|ZP_06151396.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268686844|ref|ZP_06153706.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|293398890|ref|ZP_06643055.1| cfr family radical SAM enzyme [Neisseria gonorrhoeae F62]
 gi|385335912|ref|YP_005889859.1| hypothetical protein NGTW08_1028 [Neisseria gonorrhoeae
           TCDC-NG08107]
 gi|75356171|sp|Q5F911.1|RLMN_NEIG1 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|254807190|sp|B4RMG2.1|RLMN_NEIG2 RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|59717921|gb|AAW89326.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|193934173|gb|ACF29997.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226512980|gb|EEH62325.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548388|gb|EEZ43806.1| ribosomal RNA large subunit methyltransferase N [Neisseria
           gonorrhoeae 35/02]
 gi|268550409|gb|EEZ45428.1| ribosomal RNA large subunit methyltransferase N [Neisseria
           gonorrhoeae FA19]
 gi|268583358|gb|EEZ48034.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268588044|gb|EEZ52720.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268622660|gb|EEZ55060.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624818|gb|EEZ57218.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627128|gb|EEZ59528.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291610304|gb|EFF39414.1| cfr family radical SAM enzyme [Neisseria gonorrhoeae F62]
 gi|317164455|gb|ADV07996.1| hypothetical protein NGTW08_1028 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 364

 Score =  394 bits (1012), Expect = e-106,   Method: Composition-based stats.
 Identities = 185/344 (53%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +F++MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFDEMTDLAKSLRHKLNEQASIEIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGVNDKAQHAYELIELVKD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I+IF  IL  +   VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRIFRDILQQAEFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|225075197|ref|ZP_03718396.1| hypothetical protein NEIFLAOT_00197 [Neisseria flavescens
           NRL30031/H210]
 gi|224953372|gb|EEG34581.1| hypothetical protein NEIFLAOT_00197 [Neisseria flavescens
           NRL30031/H210]
          Length = 398

 Score =  394 bits (1011), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 239/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +W+H+ G  +F +MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 55  EMGEKPFRAKQVMRWMHQAGAQNFEEMTDLAKSLRAKLNEQATIEVPKLMMAQESTDGTR 114

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 115 KWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 174

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 175 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 228

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 229 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACQRYLVK 288

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 289 APRDFITFEYVMLDGINDKAQHARELIELVKD----VPCKFNLIPFNPFPNSGYERSTNE 344

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL   G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 345 NIRVFRDILQQVGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 388


>gi|400287786|ref|ZP_10789818.1| GTP-binding protein Der [Psychrobacter sp. PAMC 21119]
          Length = 473

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/478 (42%), Positives = 304/478 (63%), Gaps = 16/478 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           +KPV+ L+GRPNVGKSTLFN+ T SR ALVA+  GLTRDR YG+     K+FI++DTGG 
Sbjct: 3   IKPVVALIGRPNVGKSTLFNQFTKSRQALVADLSGLTRDRQYGDAVYEGKAFIVVDTGGI 62

Query: 61  -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
            E +   G + + M++Q+  AI E+DII+F+VD R G++  D  I  FL   G+P+ +V 
Sbjct: 63  GEADDGSGNIDDYMSEQSHTAIHEADIIVFVVDARAGMIGADAEIGKFLHTLGKPVYVVA 122

Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           NK + ++ S   +FY LG+G P+ ++A +G G+ N LE ILT ++P        E   + 
Sbjct: 123 NKVDGVHDSAPAEFYALGLGEPYPMAASHGRGVGNLLE-ILTADMP--------EQDAMV 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   ++ + K Y+LIDTA
Sbjct: 174 EPRGLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPYKRDGKDYVLIDTA 233

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E +EKFSVIKTL++I ++NV ++++DA + I  QD+++  +  ++GR+L+V
Sbjct: 234 GVRRRGKIDEKVEKFSVIKTLQAIEDSNVTVIVIDAHEGIVDQDLHMIGYALDAGRALVV 293

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +  +QR  IK  + ++ NF+ +   + ISA+    + +   SI   Y SS+  
Sbjct: 294 AINKWDGLTQDQRDYIKIEMDRRFNFIPYVKVHLISALHGTGVGNLYPSILRAYQSSMFE 353

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST+R+T+ L  A+  +PP      R KLRYAH GG NPP+IVIHGN+   +   Y+RYL
Sbjct: 354 VSTNRLTQILQDAVTANPPPTVAGRRIKLRYAHIGGHNPPVIVIHGNQTGSLPKSYQRYL 413

Query: 419 EKYFYRTFSLIDALEKNIVGEI----YNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHK 472
           E  F + F L +    N+V ++    Y        K  A  +++  +N  +KF +  K
Sbjct: 414 ENQFRQVFKL-EGTPLNVVFKLNENPYANKSDTPTKAKAQQLRQRERNRAQKFTTKDK 470


>gi|388257755|ref|ZP_10134934.1| GTP-binding protein EngA [Cellvibrio sp. BR]
 gi|387938922|gb|EIK45474.1| GTP-binding protein EngA [Cellvibrio sp. BR]
          Length = 468

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/428 (46%), Positives = 286/428 (66%), Gaps = 10/428 (2%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           PV+ LVGRPNVGKSTLFNRLT SRDALVA+YPGLTRDR YGEG +  + FI+IDTGG   
Sbjct: 4   PVIALVGRPNVGKSTLFNRLTQSRDALVADYPGLTRDRKYGEGILENRRFIVIDTGGISG 63

Query: 63  EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
           E ++GI   M  Q+  AI E+DI++FIVD R GL   D+ I   LR + +   LV NK +
Sbjct: 64  E-EEGIDSMMAGQSLLAIQEADIVLFIVDSRAGLNPADETIAKHLRVNNKKTYLVANKID 122

Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELP-YKKFFKKKEFTNIHSI 180
             +  I+L  FYELG+G  +  +A +G G+++ +E +L  E+P + + ++  + T I   
Sbjct: 123 GTDPDIALAPFYELGLGEVYPTTASHGRGVRSLMEEVLA-EIPEFPEDYQPDDATGI--- 178

Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
              K+AIVG+PNVGKSTL+N LLGE+RV+ YD PGTTRDSI   +   +K Y +IDTAG+
Sbjct: 179 ---KIAIVGRPNVGKSTLVNRLLGEDRVVVYDEPGTTRDSIYINYTRFDKPYTIIDTAGV 235

Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
           RRR     ++EKFS++KT+++I +ANVV+L++DA + +  QD+++     E+GR+L++ +
Sbjct: 236 RRRKNIDLMVEKFSIVKTMQAIADANVVVLVMDASEGVVEQDLHLMGTTIEAGRALVIAL 295

Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
           NKWD +    ++ +KN I+++L F+ FA  +FISA+    + +  +SI   Y S+    S
Sbjct: 296 NKWDGLDDAHKQYVKNEIERRLRFVDFATIHFISALHGTGVGNLYKSIELAYQSATDKFS 355

Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
           T+ +TR L  A++ H P   +  R KLRYAH GG NPPIIVIHGN+   + + Y +YLEK
Sbjct: 356 TNYLTRILQDAVREHQPPMIQGRRIKLRYAHPGGHNPPIIVIHGNQTNDVPSHYTKYLEK 415

Query: 421 YFYRTFSL 428
            F R   L
Sbjct: 416 TFRRVLDL 423


>gi|268601574|ref|ZP_06135741.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291043577|ref|ZP_06569293.1| ribosomal RNA large subunit methyltransferase N [Neisseria
           gonorrhoeae DGI2]
 gi|268585705|gb|EEZ50381.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291012040|gb|EFE04029.1| ribosomal RNA large subunit methyltransferase N [Neisseria
           gonorrhoeae DGI2]
          Length = 364

 Score =  393 bits (1010), Expect = e-106,   Method: Composition-based stats.
 Identities = 185/344 (53%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +W+H+ G  +F++MTDL+ SLR KL     I+ P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWMHQSGAQNFDEMTDLAKSLRHKLNEQASIEIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L+DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLNDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA ELI L++       CK NLIPFN FPNS    S N 
Sbjct: 253 APRDFITFEYVMLDGVNDKAQHAYELIELVKD----VPCKFNLIPFNPFPNSGYERSSNE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I+IF  IL  +   VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRIFRDILQQAEFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|77164340|ref|YP_342865.1| small GTP-binding protein domain-containing protein [Nitrosococcus
           oceani ATCC 19707]
 gi|254434862|ref|ZP_05048370.1| GTPase, putative [Nitrosococcus oceani AFC27]
 gi|123757906|sp|Q3JCW1.1|DER_NITOC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|76882654|gb|ABA57335.1| Small GTP-binding domain protein [Nitrosococcus oceani ATCC 19707]
 gi|207091195|gb|EDZ68466.1| GTPase, putative [Nitrosococcus oceani AFC27]
          Length = 464

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/430 (46%), Positives = 292/430 (67%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  ++ LVGRPNVGKSTLFNRLT SRDALV + PG+TRDR YG  + G++SF ++DTGG 
Sbjct: 1   MNALVALVGRPNVGKSTLFNRLTRSRDALVVDQPGVTRDRKYGLAHYGEQSFFVVDTGGV 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E + GI   M  Q + AI E+D+I F+VDGR+GL   D+ I  +LR + +P+ LVINK
Sbjct: 61  M-EQESGIGRLMRAQAQLAIEEADVIFFLVDGREGLSSLDEEIAAWLRCAQKPLKLVINK 119

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E  +   ++ +FY LG+G P IISA  G G+   LE +LT          ++E + I +
Sbjct: 120 AEGRDGDLVASEFYRLGLGEPIIISAQQGQGVGRLLEALLT-----LLPVLEREESEIQA 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + ++ A++G+PNVGKSTL+N +LGE RV++ + PGTTRDSI   F ++ K Y L+DTAG
Sbjct: 175 -KGLQFAVIGRPNVGKSTLVNRILGEERVLSSEIPGTTRDSISIPFRHHGKDYTLVDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR++  + +EKFSVI++L+SI  A VVIL++DA  ++  QD+++A  I ESG+ +++ 
Sbjct: 234 IRRRSRILDKVEKFSVIQSLQSIAIAQVVILVIDAHDSVVEQDLHLAGVILESGKGVVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   QR+ +K ++ ++L FL FA  +FISA+  + +     SI+  Y S+  HL
Sbjct: 294 VNKWDGLPLEQRQRVKTDLDRRLPFLVFARIHFISALHGSGVGDLFPSIDEAYQSANSHL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T  + RAL++A++ +PP   K  R KLRYAHQGG+NPP I+IHGN+ + +  +Y+RYL 
Sbjct: 354 PTGELNRALLAAVEKYPPPVVKGRRIKLRYAHQGGQNPPKIIIHGNQAEAVSANYRRYLI 413

Query: 420 KYFYRTFSLI 429
            YF   F L+
Sbjct: 414 NYFRNAFGLM 423


>gi|334129939|ref|ZP_08503742.1| Putative Fe-S-cluster redox enzyme [Methyloversatilis universalis
           FAM5]
 gi|333444975|gb|EGK72918.1| Putative Fe-S-cluster redox enzyme [Methyloversatilis universalis
           FAM5]
          Length = 369

 Score =  393 bits (1010), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/342 (54%), Positives = 247/342 (72%), Gaps = 7/342 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRA+Q+ +WIH+ G  DF+ M+D++ SLR KL +   ++AP  + D  S DGTRK
Sbjct: 21  LGEKPFRARQVMRWIHRNGEGDFDAMSDVAKSLRAKLSDIACVQAPVPVRDSTSTDGTRK 80

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE+ R TLCISTQ GCA++C FCSTG+QGF RNL V EIIGQLW
Sbjct: 81  WLIDVGAGNAVETVFIPEERRGTLCISTQAGCALDCAFCSTGKQGFNRNLEVSEIIGQLW 140

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           +    L   +  +  + G+R I+N+VMMGMGEPL N+ +T+ ALKL+L D+AYGLSRR V
Sbjct: 141 LANRALGAVRGGE--NDGERVISNVVMMGMGEPLANFDATVAALKLMLDDNAYGLSRRRV 198

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSGI+P +D+L   CPV LAVSLHA N+ LR++LVPI+KKYPL+EL+ AC RY+  +
Sbjct: 199 TVSTSGIVPAMDRLRDACPVALAVSLHAPNDALRDELVPINKKYPLRELLAACVRYLDRA 258

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEY ML G+ND+D HA +L+ + R+      CK NLIPFN FP +    S   R
Sbjct: 259 PRDFITFEYVMLDGVNDSDEHARQLVDIARQ----VPCKYNLIPFNPFPQAPFGRSSKER 314

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           I+ F++IL+ +GI  T RK RG+D++AACGQL+G+  D  ++
Sbjct: 315 IRRFSEILIEAGIVTTTRKTRGDDVDAACGQLAGQVLDKTRR 356


>gi|262192496|ref|ZP_06050647.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93]
 gi|422921984|ref|ZP_16955186.1| GTPase Der [Vibrio cholerae BJG-01]
 gi|262031655|gb|EEY50242.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93]
 gi|341647349|gb|EGS71432.1| GTPase Der [Vibrio cholerae BJG-01]
          Length = 494

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/456 (42%), Positives = 296/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+A +G G+   ++  L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGTLIDRALN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|89901088|ref|YP_523559.1| hypothetical protein Rfer_2310 [Rhodoferax ferrireducens T118]
 gi|123397164|sp|Q21W25.1|RLMN_RHOFD RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|89345825|gb|ABD70028.1| conserved hypothetical protein [Rhodoferax ferrireducens T118]
          Length = 382

 Score =  393 bits (1009), Expect = e-106,   Method: Composition-based stats.
 Identities = 191/339 (56%), Positives = 244/339 (71%), Gaps = 7/339 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  +RA QL +WIH+ G S+F+ M+DL+ SLR+KLK S  +KAP ++S  IS DGT K
Sbjct: 20  LGEKRYRAVQLFRWIHQKGASNFDDMSDLAKSLREKLKVSAQVKAPDLISQHISSDGTIK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   + +E VFIPE++R TLCIS+Q GCA+ C FCSTG QGF RNL  GEII QLW
Sbjct: 80  WLFDVGGGDAVEAVFIPEEDRGTLCISSQAGCAMGCRFCSTGHQGFSRNLKTGEIIAQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LR+        + +R I+N+VMMGMGEPL NY   + AL+ +L DH YGLSRR V
Sbjct: 140 FAEHFLRKHLQ-----RDERVISNVVMMGMGEPLQNYAELVPALRAMLDDHGYGLSRRRV 194

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PM+D+LA++CPV LAVSLHA N+ LR+ LVP++KKY L EL+ AC+RY+ Y+
Sbjct: 195 TVSTSGVVPMMDRLARDCPVALAVSLHAPNDLLRDDLVPLNKKYSLAELLNACNRYLAYA 254

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRK-NKILTSCKINLIPFNCFPNSNLICSKNS 833
           PR  ITFEYCML  +ND   HA +L+ L++  +     CK NLIPFN FP S L  S   
Sbjct: 255 PRDFITFEYCMLEDVNDQPEHAQQLVRLVQHYSSGGVWCKFNLIPFNPFPASGLTRSTPE 314

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           RI+ FAKIL ++GI  TIRK RG+DI+AACGQL+GE  D
Sbjct: 315 RIQAFAKILSDAGIVTTIRKTRGDDIDAACGQLAGEVKD 353


>gi|212710611|ref|ZP_03318739.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM
           30120]
 gi|422017496|ref|ZP_16364061.1| GTP-binding protein Der [Providencia alcalifaciens Dmel2]
 gi|212686692|gb|EEB46220.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM
           30120]
 gi|414105646|gb|EKT67203.1| GTP-binding protein Der [Providencia alcalifaciens Dmel2]
          Length = 492

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/453 (44%), Positives = 296/453 (65%), Gaps = 25/453 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M  Q+ QAI E+D+++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  DG-TEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL---------TIELP------ 164
           ++ I+++I + DFY LG+G  + I+A +G G+   +E+ L          IEL       
Sbjct: 120 TDGIDANIVVGDFYSLGLGEIYPIAASHGRGVTQLIEHSLKPFIEVEDEEIELTDEEANA 179

Query: 165 --YKKFFKKKEFTNIHSIEY------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
             + +   + E +     ++      IK+AIVG+PNVGKSTL N +LGE+RV+ +D PGT
Sbjct: 180 AYWAELEAEGELSEEDEDDFDPSTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVFDMPGT 239

Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
           TRDSI    E + ++YILIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++DA++
Sbjct: 240 TRDSIYIPMERDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDARE 299

Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
            IS QD+++  FI  +GRSL++ VNKWD +    R+ +K+ ++ +L F+ FA  +FISA+
Sbjct: 300 GISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFISAL 359

Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
             + + +  ES+   Y+S+   + T+ +TR +  A   H P   +  R K++YAH GG N
Sbjct: 360 HGSGVGNLFESVQEAYESATRRVGTALLTRIMKMAEDEHQPPLIRGRRVKMKYAHAGGHN 419

Query: 397 PPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           PPI+VIHGN++  + + YKRYL  YF R+ +++
Sbjct: 420 PPIVVIHGNQVSDLPDSYKRYLMNYFRRSLNVM 452


>gi|398807426|ref|ZP_10566304.1| 23S rRNA methyltransferase [Variovorax sp. CF313]
 gi|398089436|gb|EJL79952.1| 23S rRNA methyltransferase [Variovorax sp. CF313]
          Length = 382

 Score =  393 bits (1009), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/339 (54%), Positives = 246/339 (72%), Gaps = 8/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF +MTDL+ SLR+KL  +  ++A  +++   S DGT 
Sbjct: 20  KLGEKKFRATQLFRWIHQRGASDFAQMTDLAKSLREKLATTARVEALQVITQHESKDGTI 79

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEI+ QL
Sbjct: 80  KWLFDVGDGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEIVAQL 139

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR  K++K   + +R I+N+VMMGMGEPL NY + + AL+ +L D+AYGLSRR 
Sbjct: 140 WFAEHFLR--KHLK---RDERVISNVVMMGMGEPLQNYSALVPALRTMLDDNAYGLSRRR 194

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+L  +CPV +AVSLHA N+ LR+ LVP+++KYP+ ELI AC RY+ +
Sbjct: 195 VTVSTSGVVPMIDRLGADCPVAMAVSLHAPNDALRDDLVPLNRKYPIAELIEACKRYLAH 254

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA +LI L+R + I  SCK NLIPFN FP S L+ S   
Sbjct: 255 APRDFITFEYCMLDGVNDQPEHARQLIELVRTHGI--SCKFNLIPFNPFPASGLLRSPQP 312

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           R+  FA+ L  +G+  T+RK RG+DI+AACGQL+G+  D
Sbjct: 313 RVLAFARTLSEAGLVTTVRKTRGDDIDAACGQLAGDVKD 351


>gi|94501121|ref|ZP_01307644.1| predicted GTPase [Oceanobacter sp. RED65]
 gi|94426697|gb|EAT11682.1| predicted GTPase [Oceanobacter sp. RED65]
          Length = 482

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/429 (43%), Positives = 290/429 (67%), Gaps = 3/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA+  GLTRDR +G G +G++ +I++DTGG 
Sbjct: 1   MNPVIALVGRPNVGKSTLFNRLTRTRDALVADLAGLTRDRKFGAGKVGERDYIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
              +++G+  +M +Q+ QA+ E+DI++F+VD R GL   DK+I   LR + +   +V+NK
Sbjct: 61  SG-MEQGLDAKMAEQSFQAMDEADIVLFLVDARAGLTSADKMIAQHLRATEKKTYVVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +N  ++  +FYELG+G    I+A +  GI   ++++L  ELP +    +       S
Sbjct: 120 IDGLNPDVATSEFYELGLGELQTIAATHNRGINVLMDHVLN-ELPPEFQIDEDADEEDES 178

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + +++++VG+PNVGKSTL+N +LGE+RV+ YD PGTT DSI+  +E N K Y LIDTAG
Sbjct: 179 EKGVRISVVGRPNVGKSTLVNRMLGEDRVVVYDHPGTTMDSIEIPYERNEKPYTLIDTAG 238

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E  EKFS++K L++I +ANV I+++DA++ I  QD+ + +F+  SG+ L++ 
Sbjct: 239 VRRRKNIKEAAEKFSIVKALQAIQDANVCIVVIDAREGIVEQDLTMLSFVLNSGKGLVIA 298

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   Q+  +K  ++++L+F+ +A  +FISA     +    ES++  Y S+ ++L
Sbjct: 299 LNKWDGMDIEQKDFVKKELERRLSFVDWADMHFISAKHGTGVGHLYESVDEAYKSAYMNL 358

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           STS++TR L  A+ +H P      R KLRYAHQGG NPP+IV+HGN+   + + YKRYL 
Sbjct: 359 STSQLTRILEDAVMDHQPPLVGGRRIKLRYAHQGGMNPPVIVVHGNKTASLPDSYKRYLA 418

Query: 420 KYFYRTFSL 428
             F +  ++
Sbjct: 419 NTFRKVLNI 427


>gi|429212024|ref|ZP_19203189.1| GTP-binding protein EngA [Pseudomonas sp. M1]
 gi|428156506|gb|EKX03054.1| GTP-binding protein EngA [Pseudomonas sp. M1]
          Length = 495

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/447 (44%), Positives = 284/447 (63%), Gaps = 19/447 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+VA Y GLTRDR YGE     K FI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKTRDAIVAEYAGLTRDRQYGEAKWQGKKFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R GL   D++I   LRK  +   LV NK
Sbjct: 61  TGD-EEGIDAKMAEQSMQAIEEADAVLFMVDARAGLTAADEMIAEHLRKRNKRSYLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELP--- 164
            + ++  I+  +F  LG+G+   I+A +G GI + L+  L              +LP   
Sbjct: 120 IDTVDPDIARAEFSPLGLGDALTIAAAHGRGITHMLQTALGEMFQPEPEAPEDNDLPDEL 179

Query: 165 --YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
               +  + K        + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI 
Sbjct: 180 EEVAEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIY 239

Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
             FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   D
Sbjct: 240 IPFERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHD 299

Query: 283 INIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNIN 342
           +N+  F+ E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + 
Sbjct: 300 LNLLGFVLETGRALVIALNKWDGMESGERDYVKTELERRLLFVDFADIHFISALHGTGVG 359

Query: 343 SFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVI 402
              +S+   + S++    TS++T+ L  A++ H P      R KLRYAH GG NPP+IV+
Sbjct: 360 HLYKSVQESFRSAVTRWPTSKLTQILEDAVQTHQPPMVNGRRIKLRYAHLGGANPPLIVV 419

Query: 403 HGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           HGN+ + +   Y RYLEK + R   L+
Sbjct: 420 HGNQTEAVPKAYTRYLEKTYRRVLKLV 446


>gi|298368581|ref|ZP_06979899.1| radical SAM enzyme, Cfr family [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282584|gb|EFI24071.1| radical SAM enzyme, Cfr family [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 364

 Score =  392 bits (1008), Expect = e-106,   Method: Composition-based stats.
 Identities = 184/344 (53%), Positives = 243/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +W+H+ G  +F++MTDL+ SLR+KL     I+ P +M+ Q S DGTR
Sbjct: 19  EMGEKPFRAKQVMRWMHQAGAQNFDEMTDLAKSLRQKLIEGATIEVPKLMAAQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPETDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L +H YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDNHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+K+VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDKIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA ELI L+R       CK NLIPFN FP+S    S   
Sbjct: 253 APRDFITFEYVMLDGVNDNAQHARELIDLVRD----VPCKFNLIPFNPFPHSGYERSSAE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVKDKTRRQ 352


>gi|153216257|ref|ZP_01950357.1| GTP-binding protein [Vibrio cholerae 1587]
 gi|124114402|gb|EAY33222.1| GTP-binding protein [Vibrio cholerae 1587]
          Length = 494

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/456 (42%), Positives = 296/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+A +G G+   ++  L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEPLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|153800614|ref|ZP_01955200.1| GTP-binding protein [Vibrio cholerae MZO-3]
 gi|153824529|ref|ZP_01977196.1| GTP-binding protein [Vibrio cholerae MZO-2]
 gi|229513098|ref|ZP_04402564.1| GTP-binding protein EngA [Vibrio cholerae TMA 21]
 gi|229523415|ref|ZP_04412822.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80]
 gi|229525408|ref|ZP_04414813.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426]
 gi|229530107|ref|ZP_04419497.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)]
 gi|254225026|ref|ZP_04918640.1| GTP-binding protein [Vibrio cholerae V51]
 gi|384423994|ref|YP_005633352.1| GTP-binding protein EngA [Vibrio cholerae LMA3984-4]
 gi|417820186|ref|ZP_12466800.1| GTPase Der [Vibrio cholerae HE39]
 gi|417823876|ref|ZP_12470467.1| GTPase Der [Vibrio cholerae HE48]
 gi|419829375|ref|ZP_14352861.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-1A2]
 gi|419832345|ref|ZP_14355807.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-61A2]
 gi|419835675|ref|ZP_14359119.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-46B1]
 gi|421342416|ref|ZP_15792822.1| GTPase Der [Vibrio cholerae HC-43B1]
 gi|421353561|ref|ZP_15803893.1| GTPase Der [Vibrio cholerae HE-45]
 gi|422916546|ref|ZP_16950882.1| GTPase Der [Vibrio cholerae HC-02A1]
 gi|423734038|ref|ZP_17707252.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-41B1]
 gi|423818064|ref|ZP_17715485.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55C2]
 gi|423850023|ref|ZP_17719274.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59A1]
 gi|423879146|ref|ZP_17722879.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-60A1]
 gi|423950229|ref|ZP_17733669.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-40]
 gi|423977925|ref|ZP_17737217.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-46]
 gi|423996968|ref|ZP_17740229.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-02C1]
 gi|424008322|ref|ZP_17751271.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-44C1]
 gi|424015672|ref|ZP_17755517.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55B2]
 gi|424018611|ref|ZP_17758409.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59B1]
 gi|424624152|ref|ZP_18062627.1| GTPase Der [Vibrio cholerae HC-50A1]
 gi|424628648|ref|ZP_18066951.1| GTPase Der [Vibrio cholerae HC-51A1]
 gi|424632682|ref|ZP_18070796.1| GTPase Der [Vibrio cholerae HC-52A1]
 gi|424635771|ref|ZP_18073790.1| GTPase Der [Vibrio cholerae HC-55A1]
 gi|424639686|ref|ZP_18077580.1| GTPase Der [Vibrio cholerae HC-56A1]
 gi|424647748|ref|ZP_18085422.1| GTPase Der [Vibrio cholerae HC-57A1]
 gi|429884988|ref|ZP_19366593.1| GTP-binding protein EngA [Vibrio cholerae PS15]
 gi|443526534|ref|ZP_21092613.1| GTPase Der [Vibrio cholerae HC-78A1]
 gi|124123903|gb|EAY42646.1| GTP-binding protein [Vibrio cholerae MZO-3]
 gi|125622413|gb|EAZ50733.1| GTP-binding protein [Vibrio cholerae V51]
 gi|149741747|gb|EDM55776.1| GTP-binding protein [Vibrio cholerae MZO-2]
 gi|229333881|gb|EEN99367.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)]
 gi|229338989|gb|EEO04006.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426]
 gi|229339778|gb|EEO04793.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80]
 gi|229349991|gb|EEO14945.1| GTP-binding protein EngA [Vibrio cholerae TMA 21]
 gi|327483547|gb|AEA77954.1| GTP-binding protein EngA [Vibrio cholerae LMA3984-4]
 gi|340037817|gb|EGQ98791.1| GTPase Der [Vibrio cholerae HE39]
 gi|340047561|gb|EGR08484.1| GTPase Der [Vibrio cholerae HE48]
 gi|341640023|gb|EGS64626.1| GTPase Der [Vibrio cholerae HC-02A1]
 gi|395945167|gb|EJH55837.1| GTPase Der [Vibrio cholerae HC-43B1]
 gi|395952686|gb|EJH63299.1| GTPase Der [Vibrio cholerae HE-45]
 gi|408015213|gb|EKG52807.1| GTPase Der [Vibrio cholerae HC-50A1]
 gi|408020594|gb|EKG57890.1| GTPase Der [Vibrio cholerae HC-52A1]
 gi|408026442|gb|EKG63449.1| GTPase Der [Vibrio cholerae HC-56A1]
 gi|408026856|gb|EKG63850.1| GTPase Der [Vibrio cholerae HC-55A1]
 gi|408036329|gb|EKG72767.1| GTPase Der [Vibrio cholerae HC-57A1]
 gi|408058514|gb|EKG93310.1| GTPase Der [Vibrio cholerae HC-51A1]
 gi|408620960|gb|EKK93963.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-1A2]
 gi|408631484|gb|EKL04024.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-41B1]
 gi|408636377|gb|EKL08525.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55C2]
 gi|408643366|gb|EKL15091.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-60A1]
 gi|408644490|gb|EKL16174.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59A1]
 gi|408650989|gb|EKL22245.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-61A2]
 gi|408661092|gb|EKL32085.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-40]
 gi|408665937|gb|EKL36743.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-46]
 gi|408854021|gb|EKL93791.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-02C1]
 gi|408858429|gb|EKL98103.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-46B1]
 gi|408861708|gb|EKM01281.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55B2]
 gi|408865762|gb|EKM05154.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-44C1]
 gi|408869617|gb|EKM08911.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59B1]
 gi|429228320|gb|EKY34248.1| GTP-binding protein EngA [Vibrio cholerae PS15]
 gi|443455097|gb|ELT18885.1| GTPase Der [Vibrio cholerae HC-78A1]
          Length = 494

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/456 (42%), Positives = 296/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+A +G G+   ++  L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|153828302|ref|ZP_01980969.1| GTP-binding protein [Vibrio cholerae 623-39]
 gi|254285481|ref|ZP_04960445.1| GTP-binding protein [Vibrio cholerae AM-19226]
 gi|421350586|ref|ZP_15800951.1| GTPase Der [Vibrio cholerae HE-25]
 gi|422306253|ref|ZP_16393435.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1035(8)]
 gi|422909271|ref|ZP_16943920.1| GTPase Der [Vibrio cholerae HE-09]
 gi|424658624|ref|ZP_18095880.1| GTPase Der [Vibrio cholerae HE-16]
 gi|148876256|gb|EDL74391.1| GTP-binding protein [Vibrio cholerae 623-39]
 gi|150424343|gb|EDN16280.1| GTP-binding protein [Vibrio cholerae AM-19226]
 gi|341635418|gb|EGS60134.1| GTPase Der [Vibrio cholerae HE-09]
 gi|395951031|gb|EJH61645.1| GTPase Der [Vibrio cholerae HE-25]
 gi|408054532|gb|EKG89502.1| GTPase Der [Vibrio cholerae HE-16]
 gi|408626937|gb|EKK99766.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1035(8)]
          Length = 494

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/456 (42%), Positives = 296/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+A +G G+   ++  L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|336124873|ref|YP_004566921.1| GTP-binding protein [Vibrio anguillarum 775]
 gi|335342596|gb|AEH33879.1| GTP-binding protein [Vibrio anguillarum 775]
          Length = 510

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/454 (42%), Positives = 296/454 (65%), Gaps = 26/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 16  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 75

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D++I   LRK  +  +LV+NK
Sbjct: 76  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEVIAQHLRKIEKRAILVVNK 134

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLE---NILTIELPYKKFFKKKEFTN 176
            + I++ + S +F++LG+   + I+A +G G+   ++   N L  E+  +   + ++ T+
Sbjct: 135 VDGIDADAASAEFWQLGVDQMYQIAAAHGRGVGILIDRALNPLAEEMLEQAEGEIEDLTD 194

Query: 177 IHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
               E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 195 FEDAEEEKLDYTEEEAEAEYKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 254

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI      + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK++ +ANVV+L++DA+
Sbjct: 255 TTRDSIYIPMMRDEREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVLLVIDAR 314

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           +NIS QD+++  F   +GRS+++ VNKWD + ++ ++ +K  + ++L F+ FA  +FISA
Sbjct: 315 ENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFISA 374

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ES+   Y S+   + TS +TR L  A  +H P   +  R KL+YAH GG 
Sbjct: 375 LHGTGVGHLFESVQEAYKSATTRVGTSVLTRILKMATDDHQPPMVRSRRVKLKYAHAGGY 434

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPIIV+HGN +  + + YKRYL  Y+ ++  ++
Sbjct: 435 NPPIIVVHGNLVNELPDSYKRYLMNYYRKSLEIM 468


>gi|393764193|ref|ZP_10352805.1| GTP-binding protein Der [Alishewanella agri BL06]
 gi|392604823|gb|EIW87722.1| GTP-binding protein Der [Alishewanella agri BL06]
          Length = 498

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/454 (44%), Positives = 291/454 (64%), Gaps = 26/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGR NVGKSTLFNRLT SRDALVA++PGLTRDR YG        FI++DTGG 
Sbjct: 1   MLPVVALVGRANVGKSTLFNRLTRSRDALVADFPGLTRDRKYGTVKFEGMEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  EM +Q+ +AI E+D+++F+VD R G    D  I   +RK  +P+ LV NK
Sbjct: 61  DGN-EQGIEVEMAEQSLKAIAEADVVLFMVDARAGATVGDTAIAAHIRKVEKPVFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNF----------------LENILTIEL 163
           ++ +++  ++ DFY LG+G  + I+A +G G+ +                 ++     + 
Sbjct: 120 TDGLDADTAVADFYSLGLGEVYPIAAAHGRGVTSLLQLALLPFLQQQLPSAVDGEAQEDA 179

Query: 164 PYKKFFKKKEFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            + +    KE T   +         E+IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 EFAESADFKEMTEEEAEAEAARLRSEHIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 239

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    + N + Y LIDTAG+RRR K  +++EKFSV+KTL++I +ANVV+L+LDA+
Sbjct: 240 TTRDSIYIPMQRNGRDYTLIDTAGVRRRGKIDDMVEKFSVVKTLQAIEDANVVVLVLDAR 299

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           Q IS QD++I  F+  +GRSL++ VNKWD +  N +  IK  + ++L F+ FA  +FISA
Sbjct: 300 QGISDQDLSILGFVLNAGRSLVLAVNKWDGLNDNVKDEIKRELDRRLGFIDFARLHFISA 359

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   +DS+   +STS +TR +  A ++H P      R KL+YAH GG 
Sbjct: 360 LHGSGVGNLFESVEEAFDSATKRVSTSLLTRIMKMAQEDHQPPMVAGRRVKLKYAHAGGY 419

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRYL  Y+ +   ++
Sbjct: 420 NPPIVVIHGNQVKDLPDSYKRYLMNYYRKALQMM 453


>gi|88810613|ref|ZP_01125870.1| GTP-binding protein EngA [Nitrococcus mobilis Nb-231]
 gi|88792243|gb|EAR23353.1| GTP-binding protein EngA [Nitrococcus mobilis Nb-231]
          Length = 476

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/438 (45%), Positives = 285/438 (65%), Gaps = 20/438 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M+PV+VLVGRPNVGKSTLFN LT SRDALVA++P LTRDR YG G IG  ++I++DTGG 
Sbjct: 1   MEPVIVLVGRPNVGKSTLFNCLTRSRDALVADFPELTRDRQYGRGRIGPCAYIVVDTGGM 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             +    I   +  Q +QAI ++D ++F+VD R G    D+ +   LR  G+ + LV NK
Sbjct: 61  G-QGNGAISEGVQAQARQAIAQADAVLFLVDARSGPTAADEALAGELRAQGKQLFLVPNK 119

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL---------TIELPYKKFFK 170
            + +++ + + DFY LG+G+PH I+A +G G+   + ++L          +E PY++   
Sbjct: 120 VDGLDARVVAADFYTLGLGDPHPIAAAHGTGVARLMASVLQGMTAAVNEVVEPPYRRD-- 177

Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
                   ++E I+VAIVG+PNVGKSTLIN LLGE RV+ +D PGTTRDSI   FE +  
Sbjct: 178 -------TAVERIRVAIVGRPNVGKSTLINRLLGEERVLVHDQPGTTRDSIFIPFERDGF 230

Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
            Y LIDTAG+RRR++ +E +EKFS IKTL+++  A VVILLLDA ++I+ QD+ I  ++ 
Sbjct: 231 AYTLIDTAGMRRRSRVYEAVEKFSAIKTLQAVTAAQVVILLLDAHESITEQDVRIIGYVL 290

Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
           ++GR+L++ VNKWD +  ++R+ I+  +++KL FL FA   FISA+    +     ++  
Sbjct: 291 DAGRALVLAVNKWDGLEPSRREQIRRGLERKLGFLDFAKLYFISALYGTGVGLLYGAVQQ 350

Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
            Y SS   L T ++ R L  A+  H P   +  R KLRYAHQGG+NPP+IVIHGN+   +
Sbjct: 351 AYASSCRKLDTPQLNRILTEAVAAHQPPLVRGRRVKLRYAHQGGRNPPVIVIHGNQTARL 410

Query: 411 GNDYKRYLEKYFYRTFSL 428
            + Y+RYL   F R   L
Sbjct: 411 TSAYRRYLVNIFQRQLGL 428


>gi|297581162|ref|ZP_06943086.1| GTP-binding protein [Vibrio cholerae RC385]
 gi|297534478|gb|EFH73315.1| GTP-binding protein [Vibrio cholerae RC385]
          Length = 494

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/456 (42%), Positives = 296/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+A +G G+   ++  L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEQLEYSEEEAEVEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|218708645|ref|YP_002416266.1| GTP-binding protein EngA [Vibrio splendidus LGP32]
 gi|407071970|ref|ZP_11102808.1| GTP-binding protein Der [Vibrio cyclitrophicus ZF14]
 gi|254783178|sp|B7VJU2.1|DER_VIBSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|218321664|emb|CAV17618.1| GTP-binding protein engA [Vibrio splendidus LGP32]
          Length = 493

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/456 (42%), Positives = 294/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  +  +  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I   LR+  +P +LV+NK
Sbjct: 61  D-GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
            + I+  + S DF++LG+ + + I+A +G G+   ++  L    P+ +  K +       
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAENGEVSDL 176

Query: 173 -----------EFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
                      +FT   +         + IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR    E +EKFSV+KTLK+I +ANVV+LL+D
Sbjct: 237 PGTTRDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLID 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   +GRS+++ VNKWD + ++ +  +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN+++ + + YKR+L  Y+ R+  ++
Sbjct: 417 GYNPPIIVIHGNQVRNLPDSYKRFLMNYYRRSLEIM 452


>gi|359783466|ref|ZP_09286680.1| GTP-binding protein Der [Pseudomonas psychrotolerans L19]
 gi|359368683|gb|EHK69260.1| GTP-binding protein Der [Pseudomonas psychrotolerans L19]
          Length = 495

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/448 (43%), Positives = 286/448 (63%), Gaps = 21/448 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDR YGE     +++I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRKYGEAKWQGRTYIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI ESD ++F+VD R G+   D++I   LRK  +   LV NK
Sbjct: 61  SGD-EEGIDLKMAEQSLQAIEESDAVLFLVDSRDGMTVADQMIAEHLRKRNKRTFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE------ 173
            + ++  I+  +F  L IG+   I+A +G G+ N LE  L +  P  +   ++       
Sbjct: 120 VDTVDPEIARAEFSPLAIGDAFPIAAAHGRGVNNLLEAALGV-FPKDEVEVEELSEEQVR 178

Query: 174 ---------FTNIHSIEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
                    F  +  I+    IK+A++G+PNVGKSTL+N +LGE RVI YD  GTTRDSI
Sbjct: 179 AAAEEGGDVFRRVQGIDETTGIKIAVIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSI 238

Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
              FE N ++Y LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   
Sbjct: 239 YIPFERNEERYTLIDTAGVRRRGKVFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEH 298

Query: 282 DINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNI 341
           D+N+  F+ E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +
Sbjct: 299 DLNLLGFVLETGRALVIALNKWDGMESGERDYVKTELERRLLFVDFADIHFISALHGTGV 358

Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
               +S+   + S+     TSR+T+ L  A++ H P      R KLRYAH GG NPP+IV
Sbjct: 359 GHLYKSVQQSFASATTRWPTSRLTQILEDAVQEHQPPMVSGRRIKLRYAHLGGANPPLIV 418

Query: 402 IHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           IHGN+ + +   Y RYLEK + R   L+
Sbjct: 419 IHGNQTEAVPKSYTRYLEKTYRRVLKLV 446


>gi|260771392|ref|ZP_05880317.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972]
 gi|375131798|ref|YP_004993898.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
 gi|260613518|gb|EEX38712.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972]
 gi|315180972|gb|ADT87886.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
          Length = 495

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/457 (42%), Positives = 295/457 (64%), Gaps = 32/457 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M  Q+  AI E+D+++F+VDGR GL   D+ I N LR+  +  +LV+NK
Sbjct: 61  DGS-EEGVETKMAAQSLAAIDEADVVLFMVDGRAGLTVADEAIANHLRRVEKNAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE------ 173
            + I++ + S +F++LG+     I+A +G G+   ++  L    P  +  +++E      
Sbjct: 120 VDGIDAETASAEFWQLGVDQMFQIAAAHGRGVGALIDRALN---PLAEQMQQEEAALEDL 176

Query: 174 --FTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
             F +    E                    IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TGFVDAEQEEKLDYTEEEAEEAYKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 236

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTLK+I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMQRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLKAIEDANVVLLVV 296

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++NIS QD+++  F   +GRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +F
Sbjct: 297 DARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDTDVKERVKKELDRRLGFVDFARIHF 356

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+    +    ES+   Y S+   + TS +TR +  A ++H P   +  R KL+YAH 
Sbjct: 357 ISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPLVRGRRVKLKYAHA 416

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLDIM 453


>gi|86145598|ref|ZP_01063928.1| GTP-binding protein EngA [Vibrio sp. MED222]
 gi|85836569|gb|EAQ54695.1| GTP-binding protein EngA [Vibrio sp. MED222]
          Length = 493

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/456 (42%), Positives = 294/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  +  +  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I   LR+  +P +LV+NK
Sbjct: 61  D-GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
            + I+  + S DF++LG+ + + I+A +G G+   ++  L    P+ +  K +       
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAENGEVSDL 176

Query: 173 -----------EFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
                      +FT   +         + IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR    E +EKFSV+KTLK+I +ANVV+LL+D
Sbjct: 237 PGTTRDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLID 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   +GRS+++ VNKWD + ++ +  +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN+++ + + YKR+L  Y+ R+  ++
Sbjct: 417 GYNPPIIVIHGNQVRNLPDSYKRFLMNYYRRSLEIM 452


>gi|242240151|ref|YP_002988332.1| GTP-binding protein EngA [Dickeya dadantii Ech703]
 gi|242132208|gb|ACS86510.1| small GTP-binding protein [Dickeya dadantii Ech703]
          Length = 494

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/457 (43%), Positives = 293/457 (64%), Gaps = 32/457 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+ QAI E+DI++F+VD R GL+  D  I   LR   +   LV NK
Sbjct: 61  DGS-EDGVETRMAEQSLQAIEEADIVLFLVDARDGLMPADHAIAQHLRTREKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
            + I+    + DFY LG G+ + I+A +G G+ + LE+ L   LP+              
Sbjct: 120 VDGIDIDTGIADFYSLGFGDVYPIAASHGRGVTSLLESAL---LPFVDAGEPERELTEEE 176

Query: 166 --KKFFKKK-----------EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
               ++ ++           +   + + + IK+AIVG+PNVGKSTL N +LGE+RV+ YD
Sbjct: 177 ENAAYWAEQLGEEEGESEEEDAFPVPADQPIKLAIVGRPNVGKSTLTNRILGEDRVVVYD 236

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++YILIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMERDEREYILIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVI 296

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++ IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +F
Sbjct: 297 DAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEIKEQVKETLDLRLGFIDFARIHF 356

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+  + + +  ES++  Y+ S   + T+ +TR +  A+ +H P   +  R KL+YAH 
Sbjct: 357 ISALHGSGVGNLFESVDEAYECSTRRVGTAMLTRIMQMAVDDHQPPLVRGRRVKLKYAHA 416

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN++K + + YKRYL  Y+ R+  ++
Sbjct: 417 GGYNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLDVM 453


>gi|261345330|ref|ZP_05972974.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541]
 gi|282566664|gb|EFB72199.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541]
          Length = 491

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/481 (43%), Positives = 300/481 (62%), Gaps = 24/481 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M  Q+ QAI E+D+++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT------------------- 160
           ++ I+++I + DFY LG+G  + I+A +G G+   +E+ L                    
Sbjct: 120 TDGIDANIVVGDFYSLGLGEIYPIAASHGRGVTQLIEHSLKPFIEVEEEEVELTDEEANA 179

Query: 161 ---IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
               EL  +     +E     S   IK+AIVG+PNVGKSTL N +LGE+RV+ +D PGTT
Sbjct: 180 AYWAELEAESELSDEEDDFDPSTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVFDMPGTT 239

Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
           RDSI    E + ++YILIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++DA++ 
Sbjct: 240 RDSIYIPMERDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDAREG 299

Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
           IS QD+++  FI  +GRSL++ VNKWD +    R  +K+ ++ +L F+ FA  +FISA+ 
Sbjct: 300 ISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDRDHVKDMLELRLGFVDFARIHFISALH 359

Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
            + + +  ES+   Y+S+   + T+ +TR +  A   H P   +  R K++YAH GG NP
Sbjct: 360 GSGVGNLFESVQEAYESATRRVGTALLTRIMKMAEDEHQPPLIRGRRVKMKYAHAGGHNP 419

Query: 398 PIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIYNRYEKIGLKIIAAYMK 457
           PI+VIHGN++  + + YKRYL  YF R+  ++    +    E  N Y     K+ A  ++
Sbjct: 420 PIVVIHGNQVSDLPDSYKRYLMNYFRRSLKVMGTPIRIQFKEGENPYADKKNKLTATQLR 479

Query: 458 K 458
           K
Sbjct: 480 K 480


>gi|399908771|ref|ZP_10777323.1| GTP-binding protein EngA [Halomonas sp. KM-1]
          Length = 467

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/429 (44%), Positives = 282/429 (65%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K++ +IDTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGDKAYTVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AI E+DI++F+VD R GL   D+ I N LR + +   LV+NK
Sbjct: 61  SGD-EEGIDAAMAEQSLAAIDEADIVLFLVDARAGLNVADEAIANHLRVNQKKTWLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +   S   DF++LG+G+P  I+A +G  + + +E +L    P+ +  +         
Sbjct: 120 TDGLEEHSAMADFWQLGLGDPRPIAAAHGRNVTSLIEEVLA---PFPE--RDLSIPADTG 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I++ ++G+PNVGKSTL+N LLGE RV+ +D  GTTRD+I+  FE   K Y+LIDTAG
Sbjct: 175 TKGIRIGVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERRGKPYVLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E+ EKFS+IKTL++I E +V I++LDA+  +  QD+++ +++  +GR+L++ 
Sbjct: 235 VRRRKNVSEIAEKFSIIKTLEAIKECHVAIMVLDARSGLVEQDLHLLDYVLTTGRALVLA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD + H  ++ ++ +IK++L F  +A  +FISA+    +     SI   + S+  H 
Sbjct: 295 VNKWDGLEHEAKEKMRADIKRRLGFADYADLHFISALHGTAVGDLYPSIERAFASANSHW 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+T  L  A+  HPP      R KLR AHQGG NPPIIV+HGN+ + +   YKR+L 
Sbjct: 355 STNRLTTLLQDAVSQHPPPLVHGRRIKLRMAHQGGSNPPIIVVHGNQTEALPESYKRFLT 414

Query: 420 KYFYRTFSL 428
             F +   +
Sbjct: 415 NTFRKVLKV 423


>gi|319779677|ref|YP_004130590.1| ribosomal RNA large subunit methyltransferase N [Taylorella
           equigenitalis MCE9]
 gi|397661904|ref|YP_006502604.1| ribosomal RNA large subunit methyltransferase [Taylorella
           equigenitalis ATCC 35865]
 gi|317109701|gb|ADU92447.1| Ribosomal RNA large subunit methyltransferase N [Taylorella
           equigenitalis MCE9]
 gi|394350083|gb|AFN35997.1| ribosomal RNA large subunit methyltransferase [Taylorella
           equigenitalis ATCC 35865]
          Length = 378

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/342 (54%), Positives = 242/342 (70%), Gaps = 5/342 (1%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRAKQL  WIH+ G S+F+ MT+L+   RK L     I  P  ++ Q+S D
Sbjct: 20  LVAKWGHKPFRAKQLMNWIHQKGESNFSNMTNLANDFRKNLAEFAEISVPKELTKQVSTD 79

Query: 592 GTRKWIFHVKKN-IIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GT KW+F V+ N  IETVFIPE +R TLCIS+Q GC + C FCSTG QGF RNLT  EII
Sbjct: 80  GTTKWLFDVQNNNAIETVFIPEDDRGTLCISSQAGCTVACRFCSTGHQGFNRNLTTSEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLS 710
           GQ+W+   ++           G R I+N+V MGMGEPLLNY   + A+K+++  +AYGLS
Sbjct: 140 GQVWLARKEILNSSTDIQKLPGDRVISNVVFMGMGEPLLNYDQVLPAVKMLVDQNAYGLS 199

Query: 711 RRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRY 770
           RR V +STSG+IP +DKL+Q+CPV LAVSLHA N+ LRN+L+P++KKYPLKELI AC+RY
Sbjct: 200 RRRVTVSTSGVIPFMDKLSQDCPVALAVSLHAPNDALRNQLIPLNKKYPLKELIDACNRY 259

Query: 771 ITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICS 830
           I ++PR  ITFEY ML  +NDTDIHA +LI + R+ K     K+NLIPFN FP S L  S
Sbjct: 260 IEFAPRDFITFEYIMLEDVNDTDIHANQLIEICREVK----SKVNLIPFNPFPESGLKRS 315

Query: 831 KNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            + R+K F+ IL ++GI  T RK RG+DI+AACGQL+G+  D
Sbjct: 316 SSQRVKAFSAILNDAGIVATTRKTRGDDIDAACGQLAGDIKD 357


>gi|146293744|ref|YP_001184168.1| GTP-binding protein EngA [Shewanella putrefaciens CN-32]
 gi|386314493|ref|YP_006010658.1| ribosome-associated GTPase EngA [Shewanella putrefaciens 200]
 gi|166225857|sp|A4Y8T6.1|DER_SHEPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|145565434|gb|ABP76369.1| small GTP-binding protein [Shewanella putrefaciens CN-32]
 gi|319427118|gb|ADV55192.1| ribosome-associated GTPase EngA [Shewanella putrefaciens 200]
          Length = 488

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/449 (43%), Positives = 286/449 (63%), Gaps = 24/449 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +     ++ E   
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIERQGEEEV 176

Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
           +   +Y                IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236

Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
           I    E   ++Y++IDTAG+RRR+K  +VIEKFSVIKTLK++ +ANVV+L++DA++ ++ 
Sbjct: 237 IYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296

Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
           QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+    
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356

Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
           +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416

Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           VIHGN++  + + YKRY+  YF R+  ++
Sbjct: 417 VIHGNQVSRLPDSYKRYMMNYFRRSLKVV 445


>gi|258619961|ref|ZP_05715001.1| GTP-binding protein [Vibrio mimicus VM573]
 gi|258627193|ref|ZP_05721981.1| GTP-binding protein [Vibrio mimicus VM603]
 gi|262165075|ref|ZP_06032812.1| GTP-binding protein EngA [Vibrio mimicus VM223]
 gi|262172166|ref|ZP_06039844.1| GTP-binding protein EngA [Vibrio mimicus MB-451]
 gi|424808309|ref|ZP_18233711.1| GTP-binding protein [Vibrio mimicus SX-4]
 gi|449146967|ref|ZP_21777718.1| GTP-binding protein EngA [Vibrio mimicus CAIM 602]
 gi|258580495|gb|EEW05456.1| GTP-binding protein [Vibrio mimicus VM603]
 gi|258587694|gb|EEW12403.1| GTP-binding protein [Vibrio mimicus VM573]
 gi|261893242|gb|EEY39228.1| GTP-binding protein EngA [Vibrio mimicus MB-451]
 gi|262024791|gb|EEY43459.1| GTP-binding protein EngA [Vibrio mimicus VM223]
 gi|342324846|gb|EGU20627.1| GTP-binding protein [Vibrio mimicus SX-4]
 gi|449077461|gb|EMB48444.1| GTP-binding protein EngA [Vibrio mimicus CAIM 602]
          Length = 494

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/456 (42%), Positives = 296/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+A +G G+   ++  L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMEQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEKLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLNTDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|336310635|ref|ZP_08565607.1| GTP-binding protein EngA [Shewanella sp. HN-41]
 gi|335866365|gb|EGM71356.1| GTP-binding protein EngA [Shewanella sp. HN-41]
          Length = 487

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/449 (43%), Positives = 286/449 (63%), Gaps = 24/449 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +     ++ E   
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIERQGEEEV 176

Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
           +   +Y                IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236

Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
           I    E   ++Y++IDTAG+RRR+K  +VIEKFSVIKTLK++ +ANVV+L++DA++ ++ 
Sbjct: 237 IYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296

Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
           QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+    
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356

Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
           +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416

Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           VIHGN++  + + YKRY+  YF R+  ++
Sbjct: 417 VIHGNQVSKLPDSYKRYMMNYFRRSLKVV 445


>gi|262402852|ref|ZP_06079413.1| GTP-binding protein EngA [Vibrio sp. RC586]
 gi|262351634|gb|EEZ00767.1| GTP-binding protein EngA [Vibrio sp. RC586]
          Length = 494

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/456 (42%), Positives = 296/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI++DTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+A +G G+   ++  L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSIDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|83647146|ref|YP_435581.1| GTP-binding protein EngA [Hahella chejuensis KCTC 2396]
 gi|123531965|sp|Q2SDW8.1|DER_HAHCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|83635189|gb|ABC31156.1| predicted GTPase [Hahella chejuensis KCTC 2396]
          Length = 472

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/430 (42%), Positives = 283/430 (65%), Gaps = 9/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNR+T SRDA+VAN PGLTRDR YGEG +  K +I++DTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRMTRSRDAIVANLPGLTRDRKYGEGELEGKHYIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M  Q+  A+ E+D+++F+VD + G+   D++I   LR  G+P +LV+NK
Sbjct: 61  TGE-EQGIDAAMAGQSFTAMNEADVVLFVVDAQAGVTPADEMIAKELRVRGKPTILVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +   ++  DF+ +G       +A +  G+++ LE  L       + F ++E      
Sbjct: 120 IDGMQPEVAAADFFAMGFQEYMYTAAAHNRGVRSLLEKAL-------EPFPEQEPLEGED 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++ I+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDS+   +E   ++Y LIDTAG
Sbjct: 173 DSGIRIGIIGRPNVGKSTLVNRLLGEDRVVVFDQPGTTRDSVYIPYERLGERYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E +EKFS++KTL++I +A+VV+L+LDA++ I  QD+++  F  E+GR+L++ 
Sbjct: 233 VRRRKNVSEAVEKFSIVKTLQAIKDAHVVVLVLDAREGIVDQDLHLLGFAIEAGRALVLA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + +  ++  I +++ F+ +A  +FISA+    +    ES++  +DS++   
Sbjct: 293 INKWDGMSQDDKDEVRREIDRRMGFVEYAQIHFISALHGTGVGHLYESVHECFDSAMAKW 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+++T  L  A+  H P      R KLRYAHQGG NPP+I++HGN+   + N YKRYLE
Sbjct: 353 STNQLTTLLEDAVSQHQPPMVNGRRIKLRYAHQGGSNPPLIIVHGNQTDALPNSYKRYLE 412

Query: 420 KYFYRTFSLI 429
             F +   ++
Sbjct: 413 NTFRKVLKVV 422


>gi|84387629|ref|ZP_00990646.1| GTP-binding protein EngA [Vibrio splendidus 12B01]
 gi|84377474|gb|EAP94340.1| GTP-binding protein EngA [Vibrio splendidus 12B01]
          Length = 493

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/456 (42%), Positives = 292/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  +  +  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D  I   LR+  +P +LV+NK
Sbjct: 61  D-GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
            + I+  + S DF++LG+ + + I+A +G G+   ++  L    P+ +  K +       
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAENGEVSDL 176

Query: 173 -----------EFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
                      +FT   +         + IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR    E +EKFSV+KTLK+I +ANVV+LL+D
Sbjct: 237 PGTTRDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLID 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A+ NIS QD+++  F   +GRS+++ VNKWD +  + +  +K  + ++L F+ FA  +FI
Sbjct: 297 ARDNISDQDLSLLGFALNAGRSIVIAVNKWDGLDSDVKDRVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN+++ + + YKR+L  Y+ R+  ++
Sbjct: 417 GYNPPIIVIHGNQVRNLPDSYKRFLMNYYRRSLEIM 452


>gi|344942374|ref|ZP_08781662.1| GTP-binding protein engA [Methylobacter tundripaludum SV96]
 gi|344263566|gb|EGW23837.1| GTP-binding protein engA [Methylobacter tundripaludum SV96]
          Length = 465

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/430 (47%), Positives = 281/430 (65%), Gaps = 9/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN LT SRDALVA++ GLTRDR YG   +G +  +++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNYLTRSRDALVADFSGLTRDRQYGRVKLGDRPCLVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI     KQ + A+ E+DI+ F+VD R+GL   DK+I + LRK  +P++LV NK
Sbjct: 61  ADDAE-GIESFARKQVQVALEEADIVFFMVDAREGLSASDKVIADTLRKLQKPVILVTNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++S +  DFY L +G P  I+A +G GI   LE +  +  P      K E    HS
Sbjct: 120 VDGLDASTAASDFYSLALGEPVKIAASHGKGIPELLEKVNQLLPP-----DKGEVEEAHS 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I +A+VG+PNVGKSTL+N LLGE RVI +D PGTTRDSI   FE N KK+ LIDTAG
Sbjct: 175 --GIGIAVVGRPNVGKSTLVNRLLGEERVIVFDEPGTTRDSIYIPFERNGKKFTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR+K  E IEKFSVIK+L++I +ANVVI L+DA++ I+ QD ++   + E+GR+LI+ 
Sbjct: 233 MRRRSKIAETIEKFSVIKSLQAIEKANVVIYLIDAREGITDQDAHLLGLVLEAGRALIIG 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD I  +Q+  I   +  KL+FL FA  + ISA+  + +    + +  +Y ++++ +
Sbjct: 293 LNKWDGISADQKATIHRQLDVKLSFLEFAEKHPISALHGSGVGKMFDVVQQLYAAAMLDM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L  A   H P      R KL+YAHQGG+NPPI+VIHG +   +   YKRYL 
Sbjct: 353 STPVLTRILKEATTAHQPPIVNSRRVKLKYAHQGGRNPPIVVIHGVQTDSLPESYKRYLI 412

Query: 420 KYFYRTFSLI 429
            Y+     L+
Sbjct: 413 NYYRDKMGLV 422


>gi|397170943|ref|ZP_10494353.1| GTP-binding protein Der [Alishewanella aestuarii B11]
 gi|396087417|gb|EJI85017.1| GTP-binding protein Der [Alishewanella aestuarii B11]
          Length = 498

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/454 (44%), Positives = 291/454 (64%), Gaps = 26/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGR NVGKSTLFNRLT +RDALVA++PGLTRDR YG        FI++DTGG 
Sbjct: 1   MLPVVALVGRANVGKSTLFNRLTRTRDALVADFPGLTRDRKYGSVKFEGMEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  EM +Q+ +AI E+D+++F+VD R G    D  I   +RK  +P+ LV NK
Sbjct: 61  DGN-EQGIEVEMAEQSLKAIAEADVVLFMVDARAGATVGDTAIAAHIRKVEKPVFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNF----------------LENILTIEL 163
           ++ +++  ++ DFY LG+G  + I+A +G G+ +                  E     + 
Sbjct: 120 TDGLDADTAVADFYSLGLGEVYPIAAAHGRGVTSLLQLALLPFLQQQLPAAAEGEAQDDA 179

Query: 164 PYKKFFKKKEFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            + +    KE T   +         E+IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 EFTESADFKEMTEEEAEAEAARLRSEHIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 239

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    + N++ Y LIDTAG+RRR K  +++EKFSV+KTL++I +ANVV+L+LDA+
Sbjct: 240 TTRDSIYIPMQRNDRNYTLIDTAGVRRRGKIDDMVEKFSVVKTLQAIEDANVVVLVLDAR 299

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           Q IS QD++I  F+  +GRSL++ VNKWD +  + +  IK  + ++L F+ FA  +FISA
Sbjct: 300 QGISDQDLSILGFVLNAGRSLVLAVNKWDGLNDSVKDEIKRELDRRLGFIDFARLHFISA 359

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   +DS+   +STS +TR +  A ++H P      R KL+YAH GG 
Sbjct: 360 LHGSGVGNLFESVEEAFDSATKRVSTSLLTRIMKMAQEDHQPPMVAGRRVKLKYAHAGGY 419

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPIIVIHGN++K + + YKRYL  Y+ +   ++
Sbjct: 420 NPPIIVIHGNQVKDLPDSYKRYLMNYYRKALQMM 453


>gi|350563231|ref|ZP_08932053.1| ribosome-associated GTPase EngA [Thioalkalimicrobium aerophilum
           AL3]
 gi|349779095|gb|EGZ33442.1| ribosome-associated GTPase EngA [Thioalkalimicrobium aerophilum
           AL3]
          Length = 475

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/426 (44%), Positives = 282/426 (66%), Gaps = 6/426 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KP++ LVGRPNVGKSTLFNRLT +RDA+VA++PGLTRDR YG G +G   +I++DTGG  
Sbjct: 3   KPIIALVGRPNVGKSTLFNRLTKTRDAIVADFPGLTRDRQYGTGKVGSSEYIVVDTGGLS 62

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
            E   G+   M  Q +QAI ES  I F+VDGR G+   D+ I N++R  G+P+ +++NK+
Sbjct: 63  GE-DLGVDSLMAGQVQQAIAESHGIFFLVDGRAGITPADEAIANYIRGFGKPVQVLVNKT 121

Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
           E  N ++ + +FY LG+G P  IS+ +G+ +   ++ ++   +P  +   +++  ++   
Sbjct: 122 EGCNLAVLTAEFYALGLGEPIGISSAHGDNVAEAVDELIE-RMPETE---EQQSFDLDEH 177

Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
             I+VA++G+PNVGKSTLIN +LGE+RV+ +D PGTTRDSI   FE + + Y LIDTAG+
Sbjct: 178 PGIRVAVIGRPNVGKSTLINRMLGEDRVVAFDMPGTTRDSIYVPFERDGQAYTLIDTAGV 237

Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
           RRR K  E IEKFSV+K ++++ +A+VV++L+D  + I+ QD+ +     ESGR L++ V
Sbjct: 238 RRRKKVSEKIEKFSVLKAIEAMQDAHVVVMLMDGSEGITDQDLTLLGLAIESGRGLVLAV 297

Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
           NKWD +  +QR  IK+ +  +L F+S+A  + ISA+  + +     SI  VY ++   +S
Sbjct: 298 NKWDGLDSDQRAKIKHELDLRLQFISYAKTHLISALHGSGVGDLFSSIKKVYRAATQKVS 357

Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
           T+ + R L  AI +H P      R K+RYAH GG NPP ++IHGN+L      YKRYLE 
Sbjct: 358 TADLNRVLEQAILDHQPPLVGGRRLKMRYAHLGGLNPPRVIIHGNKLDKTPAPYKRYLEN 417

Query: 421 YFYRTF 426
            F + F
Sbjct: 418 VFRKAF 423


>gi|303257588|ref|ZP_07343600.1| radical SAM enzyme, Cfr family [Burkholderiales bacterium 1_1_47]
 gi|302859558|gb|EFL82637.1| radical SAM enzyme, Cfr family [Burkholderiales bacterium 1_1_47]
          Length = 384

 Score =  391 bits (1005), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/347 (53%), Positives = 249/347 (71%), Gaps = 7/347 (2%)

Query: 530 KNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQIS 589
           K    +LGE PFRAKQL++WIH+ G  DF++MTDL+ S R KL+    I+ P I+ D+ +
Sbjct: 16  KKFCEDLGEKPFRAKQLERWIHRRGARDFSEMTDLAKSFRAKLEKVAEIRGPEIIRDKTA 75

Query: 590 FDGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGE 648
            DGTRKW+  V   N +E V+IP+  R TLC+S+Q GCA+NC+FCSTG+QGF RNL   E
Sbjct: 76  ADGTRKWLLDVGSGNAVEMVYIPQDGRGTLCVSSQAGCAMNCLFCSTGKQGFNRNLKASE 135

Query: 649 IIGQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           IIGQL   E  LR  K++ I  + +R I+N+VMMGMGEPL N  + I +LKL+L D+AYG
Sbjct: 136 IIGQLRHAEHTLR--KDLGITDENERVISNVVMMGMGEPLQNLDAVIPSLKLMLDDNAYG 193

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V +STSG++  +DKLA++CPV LAVSLHA NN LR+K++P+++K+PL++L+ AC 
Sbjct: 194 LSRRRVTVSTSGLVRQMDKLAEQCPVALAVSLHAPNNELRDKIMPVNRKHPLEQLLAACK 253

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+ ++PR  ITFEY ++ G+ND+   A ELI+L++       CK NLIPFN FP S L 
Sbjct: 254 RYLEHAPRDFITFEYILIGGVNDSLAQAKELITLVQD----IPCKFNLIPFNPFPGSGLE 309

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
            SK   +K FA  L  +GI  T+RK+RG+DI+AACGQL+GE  D  K
Sbjct: 310 RSKPEEVKAFADRLNGAGIVTTVRKVRGDDIDAACGQLAGEIKDRTK 356


>gi|296387686|ref|ZP_06877161.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAb1]
 gi|416875231|ref|ZP_11918575.1| GTP-binding protein Der [Pseudomonas aeruginosa 152504]
 gi|334842200|gb|EGM20812.1| GTP-binding protein Der [Pseudomonas aeruginosa 152504]
          Length = 493

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/445 (45%), Positives = 287/445 (64%), Gaps = 17/445 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R G+   D++I   LRK  +   LV NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
            + I+  ++  +F  LG+G+   I+A +G GI + L+  L I            E   ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNAEEEGEGEPASEE 179

Query: 168 FFKKKEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
             + +E T I      + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI   
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
           FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   D+N
Sbjct: 240 FERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+ E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +   
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            +S+   + S++    TSR+T  L  A++ H P      R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  +   Y RYLEK + R   L+
Sbjct: 420 NQVDAVPKAYTRYLEKTYRRVLKLV 444


>gi|126668584|ref|ZP_01739538.1| GTP-binding protein EngA [Marinobacter sp. ELB17]
 gi|126626989|gb|EAZ97632.1| GTP-binding protein EngA [Marinobacter sp. ELB17]
          Length = 474

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/429 (45%), Positives = 289/429 (67%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKSTLFN++T SRDALVA++PGLTRDR YGEG    + FI+IDTGG 
Sbjct: 1   MNLVIALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGNYENQRFIVIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+   M KQ+ QA+ E+DI++FIVDGR G++  D+++ + LR+SG    LVINK
Sbjct: 61  MGD-ELGLDAAMAKQSLQAVEEADIVLFIVDGRAGVMPGDQVLADQLRRSGTQAHLVINK 119

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++  + + ++ DFY LG  +   I+A +  G+++ LE    I LP  +  +  +    H+
Sbjct: 120 TDGQDPNLVASDFYALGFQSQFRIAASHNRGVRSMLE----ILLPTPE--EDADIDGAHN 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++ IVG+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   +E   ++Y LIDTAG
Sbjct: 174 HPGIRIGIVGRPNVGKSTLVNRMLGEERVVVYDLPGTTRDSIYIPYERLGQEYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    EV+EKFS+IKTL++I +A+VVIL++DA++ +  QD+++  F+  +GRSL++ 
Sbjct: 234 VRRRKNVREVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDMHLMGFVLSAGRSLVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    R  +K  I+++L+FL +A  ++ISA+  + +    +S+N  Y+S++   
Sbjct: 294 INKWDGMNGEDRDKVKEQIRRRLDFLDYADKHYISALHGSGVGVMYQSVNACYESAMAKW 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T+R+T  L  AI  H P      R KLRYAHQGG NPP IV+HGN+   +   YKRYLE
Sbjct: 354 PTNRLTTILEDAIAQHQPPMVHGRRIKLRYAHQGGSNPPTIVVHGNQTDSLPGAYKRYLE 413

Query: 420 KYFYRTFSL 428
             F +  ++
Sbjct: 414 NSFRKVLAV 422


>gi|375109384|ref|ZP_09755632.1| GTP-binding protein Der [Alishewanella jeotgali KCTC 22429]
 gi|374570474|gb|EHR41609.1| GTP-binding protein Der [Alishewanella jeotgali KCTC 22429]
          Length = 498

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/454 (44%), Positives = 292/454 (64%), Gaps = 26/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGR NVGKSTLFNRLT +RDALVA++PGLTRDR YG        FI++DTGG 
Sbjct: 1   MLPVVALVGRANVGKSTLFNRLTRTRDALVADFPGLTRDRKYGSVKFEGMEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  EM +Q+ +AI E+D+++F+VD R G    D  I   +RK  +P+ LV NK
Sbjct: 61  DGN-EQGIEVEMAEQSLKAIAEADVVLFMVDARAGATVGDTAIAAHIRKVEKPVFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNF----------------LENILTIEL 163
           ++ +++  ++ DFY LG+G  + I+A +G G+ +                 +E     + 
Sbjct: 120 TDGLDADTAIADFYSLGMGEVYPIAAAHGRGVTSLLQLALLPFLQQQLPAAVEGEAQEDA 179

Query: 164 PYKKFFKKKEFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            + +    KE T   +         E+IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 EFVESADFKEMTEEEAEAEAARLRSEHIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 239

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    + N++ Y LIDTAG+RRR K  +++EKFSV+KTL++I +ANVV+L+LDA+
Sbjct: 240 TTRDSIYIPMQRNDRNYTLIDTAGVRRRGKIDDMVEKFSVVKTLQAIEDANVVVLVLDAR 299

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           Q IS QD++I  F+  +GRSL++ VNKWD +  + +  IK  + ++L F+ FA  +FISA
Sbjct: 300 QGISDQDLSILGFVLNAGRSLVLAVNKWDGLNDSVKDEIKRELDRRLGFIDFARLHFISA 359

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   +DS+   +STS +TR +  A ++H P      R KL+YAH GG 
Sbjct: 360 LHGSGVGNLFESVEEAFDSATKRVSTSLLTRIMKMAQEDHQPPMVAGRRVKLKYAHAGGY 419

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPIIVIHGN++K + + YKRYL  Y+ +   ++
Sbjct: 420 NPPIIVIHGNQVKDLPDSYKRYLMNYYRKALQMM 453


>gi|254514003|ref|ZP_05126064.1| GTP-binding protein EngA [gamma proteobacterium NOR5-3]
 gi|219676246|gb|EED32611.1| GTP-binding protein EngA [gamma proteobacterium NOR5-3]
          Length = 474

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/430 (44%), Positives = 284/430 (66%), Gaps = 9/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P + LVGRPNVGKSTLFN+LT SRDALVAN  GLTRDR YGEG    ++FI+IDTGG 
Sbjct: 1   MLPSIALVGRPNVGKSTLFNQLTRSRDALVANLSGLTRDRKYGEGRSEDRAFIVIDTGGV 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AI E+D+++ +VD + GL   D  +  +LR+  +   LV+NK
Sbjct: 61  SGD-EEGIDAAMAEQSLLAIDEADVVLLLVDAKDGLNPVDVQLVQYLRQKSRDFHLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
            +  +  +++ DF+ LGI + H I+A +G G++  +E +L ++ +P      ++E     
Sbjct: 120 IDGRDPDVAISDFHSLGIASMHAIAASHGRGVRQMIETVLESVPIPEADDDAQEEQGGT- 178

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
                +VA+VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+   F    + Y LIDTA
Sbjct: 179 -----RVAVVGRPNVGKSTLVNRILGEDRVVVYDQPGTTRDSVYINFSREGRPYTLIDTA 233

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR    E +EKFS+IKTL +I +ANVV+LL+D Q+ +  QD+++     E+GR+L++
Sbjct: 234 GVRRRKNVREAVEKFSIIKTLSAISDANVVVLLVDGQEGLVDQDLHLLGNCLEAGRALVL 293

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  +Q+  I++ + ++L F+ FA  +FISA+  + + +   SI+  Y +++  
Sbjct: 294 AVNKWDGLDPDQKDAIRSELDRRLRFVDFADMHFISALHGSGVGTLFGSIDAAYTAAMQP 353

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + TSR+TR L  A+ +HPP      R KLRYAH GG+NPP +V+HGN+   + + Y+RYL
Sbjct: 354 MGTSRLTRILEDAVADHPPPLVNGRRIKLRYAHAGGRNPPRVVVHGNQTDKVPSSYQRYL 413

Query: 419 EKYFYRTFSL 428
           EK F R   L
Sbjct: 414 EKTFSRCLEL 423


>gi|330999629|ref|ZP_08323338.1| 23S rRNA m2A2503 methyltransferase [Parasutterella
           excrementihominis YIT 11859]
 gi|329574135|gb|EGG55711.1| 23S rRNA m2A2503 methyltransferase [Parasutterella
           excrementihominis YIT 11859]
          Length = 389

 Score =  391 bits (1005), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/347 (53%), Positives = 249/347 (71%), Gaps = 7/347 (2%)

Query: 530 KNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQIS 589
           K    +LGE PFRAKQL++WIH+ G  DF++MTDL+ S R KL+    I+ P I+ D+ +
Sbjct: 21  KKFCEDLGEKPFRAKQLERWIHRRGARDFSEMTDLAKSFRAKLEKVAEIRGPEIIRDKTA 80

Query: 590 FDGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGE 648
            DGTRKW+  V   N +E V+IP+  R TLC+S+Q GCA+NC+FCSTG+QGF RNL   E
Sbjct: 81  ADGTRKWLLDVGSGNAVEMVYIPQDGRGTLCVSSQAGCAMNCLFCSTGKQGFNRNLKASE 140

Query: 649 IIGQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           IIGQL   E  LR  K++ I  + +R I+N+VMMGMGEPL N  + I +LKL+L D+AYG
Sbjct: 141 IIGQLRHAEHTLR--KDLGITDENERVISNVVMMGMGEPLQNLDAVIPSLKLMLDDNAYG 198

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LSRR V +STSG++  +DKLA++CPV LAVSLHA NN LR+K++P+++K+PL++L+ AC 
Sbjct: 199 LSRRRVTVSTSGLVRQMDKLAEQCPVALAVSLHAPNNELRDKIMPVNRKHPLEQLLAACK 258

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RY+ ++PR  ITFEY ++ G+ND+   A ELI+L++       CK NLIPFN FP S L 
Sbjct: 259 RYLEHAPRDFITFEYILIGGVNDSLAQAKELITLVQD----IPCKFNLIPFNPFPGSGLE 314

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
            SK   +K FA  L  +GI  T+RK+RG+DI+AACGQL+GE  D  K
Sbjct: 315 RSKPEEVKAFADRLNGAGIVTTVRKVRGDDIDAACGQLAGEIKDRTK 361


>gi|399544725|ref|YP_006558033.1| GTPase Der [Marinobacter sp. BSs20148]
 gi|399160057|gb|AFP30620.1| GTPase Der [Marinobacter sp. BSs20148]
          Length = 474

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/429 (45%), Positives = 289/429 (67%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKSTLFN++T SRDALVA++PGLTRDR YGEG    + FI+IDTGG 
Sbjct: 1   MNLVIALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGNYENQRFIVIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+   M KQ+ QA+ E+DI++FIVDGR G++  D+++ + LR+SG    LVINK
Sbjct: 61  MGD-ELGLDAAMAKQSLQAVEEADIVLFIVDGRAGVMPGDQVLADQLRRSGTQAHLVINK 119

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++  + + ++ DFY LG  +   I+A +  G+++ LE    I LP  +  +  +    H+
Sbjct: 120 TDGQDPNLVASDFYALGFQSQFRIAASHNRGVRSMLE----ILLPTPE--EDADVDGAHN 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++ IVG+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   +E   ++Y LIDTAG
Sbjct: 174 HPGIRIGIVGRPNVGKSTLVNRMLGEERVVVYDLPGTTRDSIYIPYERLGQEYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    EV+EKFS+IKTL++I +A+VVIL++DA++ +  QD+++  F+  +GRSL++ 
Sbjct: 234 VRRRKNVREVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDMHLMGFVLSAGRSLVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    R  +K  I+++L+FL +A  ++ISA+  + +    +S+N  Y+S++   
Sbjct: 294 INKWDGMNGEDRDKVKEQIRRRLDFLDYADKHYISALHGSGVGVMYQSVNACYESAMAKW 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T+R+T  L  AI  H P      R KLRYAHQGG NPP IV+HGN+   +   YKRYLE
Sbjct: 354 PTNRLTTILEDAIAQHQPPMVHGRRIKLRYAHQGGSNPPTIVVHGNQTDSLPGAYKRYLE 413

Query: 420 KYFYRTFSL 428
             F +  ++
Sbjct: 414 NSFRKVLAV 422


>gi|88703668|ref|ZP_01101384.1| GTP-binding protein engA [Congregibacter litoralis KT71]
 gi|88702382|gb|EAQ99485.1| GTP-binding protein engA [Congregibacter litoralis KT71]
          Length = 495

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/447 (44%), Positives = 288/447 (64%), Gaps = 22/447 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P + LVGRPNVGKSTLFN+LT SRDALVAN  GLTRDR YGEG    ++FI+IDTGG 
Sbjct: 1   MLPSIALVGRPNVGKSTLFNQLTRSRDALVANLSGLTRDRKYGEGRSDDRAFIVIDTGGV 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AI E+DI++ +VD R GL   D+ +  +LR+  +   LV+NK
Sbjct: 61  SGD-EEGIDAAMAEQSLLAIEEADIVLLLVDARDGLNPVDEQLVQYLRQQSRDFHLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYK------------ 166
            +  +  +++ DF+ LGI + H I+A +G G++  +E++L TI   Y+            
Sbjct: 120 IDGRDPDVAVSDFHALGIASMHAIAASHGRGVRQMIESVLETIPRSYEHPEAEGDSEEEG 179

Query: 167 -----KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
                   + ++    H     +VAIVG+PNVGKSTL+N +LGE RV+ YD PGTTRDS+
Sbjct: 180 GIEGSGAEQGEDEAEDHG--GTRVAIVGRPNVGKSTLVNRILGEERVVVYDQPGTTRDSV 237

Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
              F    + Y LIDTAG+RRR    E IEKFS+IKTL +I +ANVV+LL+D Q+ +  Q
Sbjct: 238 YIKFVREGRPYTLIDTAGVRRRKNVREAIEKFSIIKTLSAISDANVVVLLVDGQEGLVDQ 297

Query: 282 DINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNI 341
           D+++     E+GR+L++ VNKWD +  +Q+++I++ + ++L F+ FA  +FISA+  + +
Sbjct: 298 DLHLLGHCLEAGRALVLAVNKWDGLDPDQKEMIRSELDRRLRFVEFADMHFISALHGSGV 357

Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
            +   SI+  Y +++  + TSR+TR L  A+ +HPP      R KLRYAH GG+NPP +V
Sbjct: 358 GTLFGSIDAAYAAAMQPMGTSRLTRILEEAVADHPPPLVNGRRIKLRYAHAGGRNPPRVV 417

Query: 402 IHGNRLKYIGNDYKRYLEKYFYRTFSL 428
           +HGN+   + N Y+RYLEK F R   L
Sbjct: 418 VHGNQTDKVPNSYQRYLEKVFSRRLEL 444


>gi|270156684|ref|ZP_06185341.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968]
 gi|289164869|ref|YP_003455007.1| GTPase involved in ribosome synthesis and maintenance [Legionella
           longbeachae NSW150]
 gi|269988709|gb|EEZ94963.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968]
 gi|288858042|emb|CBJ11902.1| GTPase involved in ribosome synthesis and maintenance [Legionella
           longbeachae NSW150]
          Length = 466

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/468 (46%), Positives = 302/468 (64%), Gaps = 20/468 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT ++DALVA+YPGLTRDR YG+     K +I++DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNKLTKTQDALVADYPGLTRDRQYGQAQHDDKHYIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             +    +   M+KQ++ A+ E+DI++F+VDGR GL   D+ I   LRK  + + LV+NK
Sbjct: 61  GID-DIAVDSLMSKQSEIALHEADIVLFLVDGRDGLTGIDEKIATNLRKLNKKVHLVVNK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++  I+  DF  LGI + H IS+ +G GI+  L++IL+  +P        +   +  
Sbjct: 120 TEGLDDDIACADFQSLGITSIHSISSSHGTGIRTLLDDILSPFVP--------QCEKVEE 171

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +  IK+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F  +N++Y+LIDTAG
Sbjct: 172 MHAIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSIAIPFARDNQQYVLIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+++  E IEKFSVIKTLK+I E+NV + LLDA + I+ QD+N+  FI ESG++L++ 
Sbjct: 232 VRRKSRIDEKIEKFSVIKTLKAIEESNVCLQLLDANEGITDQDMNLLGFIIESGKALVIA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    ++ IK+ + ++L+F +FA   FISA+  + + +  + IN  Y S+I   
Sbjct: 292 VNKWDGLDEEHKEKIKSELSRRLHFANFAKIRFISALHGSGVGNLFKDINEAYTSAIQSF 351

Query: 360 STSRITRALIS-AIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           ST ++TR L   + K+ PPC     R KLRYAH GG NPP+IVIHGN+L  + + YKRYL
Sbjct: 352 STPKLTRLLQDLSTKHTPPCVNGR-RIKLRYAHLGGHNPPVIVIHGNQLADLPDSYKRYL 410

Query: 419 EKYFYRTFSLIDALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEK 466
              F R   L        VG       K G+   A    KLS+  V K
Sbjct: 411 NNEFIRHLGL--------VGTPLKLEFKGGMNPFAEKKNKLSQRQVNK 450


>gi|56461130|ref|YP_156411.1| GTP-binding protein EngA [Idiomarina loihiensis L2TR]
 gi|81821723|sp|Q5QYB3.1|DER_IDILO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|56180140|gb|AAV82862.1| GTPase EngA [Idiomarina loihiensis L2TR]
          Length = 479

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/456 (44%), Positives = 296/456 (64%), Gaps = 13/456 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI+IDTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYQFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  EM KQ+  A+ E+D+++F+VD R G+   D+ I + LRK  + + LV NK
Sbjct: 61  HGD-EEGIDEEMAKQSLLAVDEADVVLFMVDARDGVTVGDQAIADHLRKQNKKVYLVCNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLE---NILTIELP---YKKFFKKKE 173
            + I++ S   DFY L +G  + I+A +G G++  LE     +  E P     K    +E
Sbjct: 120 IDGIDAHSAMADFYSLSLGELYGIAAAHGRGVEQLLEICFKPIAEEYPDVIVPKDVASEE 179

Query: 174 FTNIHSIEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
             +   I+Y    +K+AIVG+PNVGKSTLIN +LGE RV+ YD PGTTRDS+    + N 
Sbjct: 180 LEH-DEIDYDKLPLKLAIVGRPNVGKSTLINRILGEERVVVYDMPGTTRDSVYIPMQRNE 238

Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
           ++Y+LIDTAG+RRR +  E IEKFSV+KTL++I +ANVV++++DA++ IS QD+N+  F 
Sbjct: 239 REYVLIDTAGVRRRGRIGEAIEKFSVVKTLQAIEDANVVLIVVDARETISDQDLNLIGFA 298

Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
             +GRS+++ VNKWD + ++ ++ IK  + ++L F+ FA  +FISA+    +    ES+ 
Sbjct: 299 LNAGRSIVIAVNKWDGLQNDHKEEIKRELDRRLGFVDFARLHFISALHGTGVGHLFESVE 358

Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
             Y S+   +STS++T+ +  A + H P      R KL+YAH GG NPP I+IHGN++K 
Sbjct: 359 EAYASATQRISTSKLTKIMEMAQEEHQPPLVSGRRVKLKYAHAGGYNPPRIIIHGNQVKD 418

Query: 410 IGNDYKRYLEKYFYRTFSLIDALEKNIVGEIYNRYE 445
           +   Y+RYL  YF ++  ++    K    E  N YE
Sbjct: 419 LPGAYQRYLINYFRKSLGVMGTPIKVEFREPVNPYE 454


>gi|146308511|ref|YP_001188976.1| GTP-binding protein EngA [Pseudomonas mendocina ymp]
 gi|166225842|sp|A4XY28.1|DER_PSEMY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|145576712|gb|ABP86244.1| small GTP-binding protein [Pseudomonas mendocina ymp]
          Length = 492

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/444 (43%), Positives = 285/444 (64%), Gaps = 16/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+V +  GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R G+   D++I   LR+  +   LV+NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDARAGMTASDQMIGEHLRRRNKRSFLVVNK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI--------------ELPY 165
            +N++  ++  +F  +G+G P  I+  +G GI   LE +L I              E   
Sbjct: 120 VDNLDVDLARAEFSPMGLGEPLAIAGAHGRGITQMLEAVLGIFPKDAGEPEEGAEAEEEV 179

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
           ++  + K        + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI   F
Sbjct: 180 QEGQEAKRIPGPSEKDGIKLAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIPF 239

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E +++KY LIDTAG+RRR K FE +EKFSV+KTL++I ++NVV+ ++DA++ +   D+N+
Sbjct: 240 ERDDEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDSNVVVFVMDAREGVVDHDLNL 299

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F+ ESGR+L++ +NKWD +   Q+  +K  ++++L F+ FA  +FISA+    +    
Sbjct: 300 LGFVLESGRALVIALNKWDGMDQGQKDYVKTELERRLFFVDFADIHFISALHGTGVGHLY 359

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+   + S++    TSR+T+ L  A+ +H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 360 KSVQAAFHSAVTRWPTSRLTQILEDAVSDHAPPLVNGRRIKLRYAHLGGANPPLIVIHGN 419

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           ++  +   Y RYLE  F R   L+
Sbjct: 420 QVDAVPRAYTRYLENTFRRVLKLV 443


>gi|120598182|ref|YP_962756.1| GTP-binding protein EngA [Shewanella sp. W3-18-1]
 gi|166225859|sp|A1RHQ7.1|DER_SHESW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|120558275|gb|ABM24202.1| small GTP-binding protein [Shewanella sp. W3-18-1]
          Length = 488

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/449 (43%), Positives = 286/449 (63%), Gaps = 24/449 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +     ++ E   
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIERQGEEEV 176

Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
           +   +Y                IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236

Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
           I    E   ++Y++IDTAG+RRR+K  +VIEKFSVIKTLK++ +ANVV+L++DA++ ++ 
Sbjct: 237 IYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296

Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
           QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+    
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356

Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
           +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHVGGYNPPIV 416

Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           VIHGN++  + + YKRY+  YF R+  ++
Sbjct: 417 VIHGNQVSRLPDSYKRYMMNYFRRSLKVV 445


>gi|441504678|ref|ZP_20986671.1| GTP-binding protein EngA [Photobacterium sp. AK15]
 gi|441427777|gb|ELR65246.1| GTP-binding protein EngA [Photobacterium sp. AK15]
          Length = 500

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/459 (42%), Positives = 289/459 (62%), Gaps = 34/459 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  + +  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKAELEEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR   +P  LV+NK
Sbjct: 61  DG-TEDGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADQAIAKHLRSRNKPTFLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
            + I++ S   DF++LG+   + I+A    G+   +E  L    P+ +  K++       
Sbjct: 120 IDGIDADSACADFWQLGVDAMYQIAAAQNRGVTALMERALA---PFAEELKEQAGDEDEV 176

Query: 173 ---EFTNIHSIE-------------------YIKVAIVGKPNVGKSTLINSLLGENRVIT 210
              +  ++  IE                    IK+AI+G+PNVGKSTL N +LGE RV+ 
Sbjct: 177 SIEDLNSVEDIENANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVV 236

Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
           YD PGTTRDSI    E   ++Y+LIDTAGIRRR    E +EKFSV++TLK+I +ANVV+L
Sbjct: 237 YDMPGTTRDSIYIPMEREGQEYVLIDTAGIRRRKNMHEAVEKFSVVQTLKAIEDANVVLL 296

Query: 271 LLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMF 330
           ++DA++NIS QD+++  +   +GRSL++ VNKWD + +  ++ +K+ + ++L F+ FA  
Sbjct: 297 VIDARENISDQDLSLLGYALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARI 356

Query: 331 NFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYA 390
           +FISA+    +    ES+   Y S+   +STS +TR +  A  +H P   +  R KL+YA
Sbjct: 357 HFISALHGTGVGHLYESVQEAYQSATKRISTSMLTRIMQMAQDDHQPPMIRGRRVKLKYA 416

Query: 391 HQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           H GG NPPIIVIHGN +  +   YKRYL  Y+ ++  ++
Sbjct: 417 HAGGYNPPIIVIHGNLVNELPGSYKRYLMNYYRKSLEMM 455


>gi|350561453|ref|ZP_08930291.1| ribosome-associated GTPase EngA [Thioalkalivibrio thiocyanoxidans
           ARh 4]
 gi|349780485|gb|EGZ34803.1| ribosome-associated GTPase EngA [Thioalkalivibrio thiocyanoxidans
           ARh 4]
          Length = 469

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/430 (43%), Positives = 278/430 (64%), Gaps = 2/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT SRDALVA+ PGLTRDR YG G +G   ++++DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNQLTRSRDALVADLPGLTRDRQYGIGRVGGFPYMVVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E    +   M +QT+QAI E+D+++ +VD R GL  QD+ I + LR  G   +LV NK
Sbjct: 61  SGE-DATMDAAMAQQTRQAIREADLVLLLVDARSGLTAQDQAIASDLRAEGVRALLVANK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++  S + +F+ LG+G    I+A +G G+   ++ +     P          T +  
Sbjct: 120 TDGLDIDSATAEFHALGLGAIAPIAAAHGRGVSQLMQRVHDALAPNGDDGAADPGTALDR 179

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I+VA+VG+PN GKSTLIN LLGE RV+     GTTRDSI   F+ + + Y LIDTAG
Sbjct: 180 WPGIRVALVGRPNAGKSTLINRLLGEERVLATPIAGTTRDSIFIPFQRDGQDYTLIDTAG 239

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  + +EKFSV+KTL++I  A+VVI++LDAQ  I+ QD ++   + ++GR+L++ 
Sbjct: 240 VRRRARVHDAVEKFSVVKTLQAIDAAHVVIMVLDAQAGIADQDAHLLGMVLDAGRALVLA 299

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R+ ++ ++++KL FL FA    +SA+   N+   ++ +   + S+ + L
Sbjct: 300 VNKWDGLDPDVRERVRLDLERKLGFLRFARMRLVSALHGTNVGHLLDDVREAHASAFVEL 359

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST +++R L SA+  H P      R KLRYAHQGG+NPP+IVIHGN+ + +   Y+R+LE
Sbjct: 360 STPQLSRLLESAVAEHAPPLVGHRRIKLRYAHQGGQNPPVIVIHGNQTESLPGSYRRFLE 419

Query: 420 KYFYRTFSLI 429
            +F     L+
Sbjct: 420 NFFRTHLRLV 429


>gi|326316277|ref|YP_004233949.1| radical SAM family protein [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373113|gb|ADX45382.1| radical SAM enzyme, Cfr family [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 373

 Score =  391 bits (1004), Expect = e-105,   Method: Composition-based stats.
 Identities = 184/340 (54%), Positives = 248/340 (72%), Gaps = 7/340 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF +M+DL+ SLR+KL    ++ A  ++S+ +S DGT 
Sbjct: 19  QLGEKRFRAVQLFRWIHQRGASDFARMSDLAKSLREKLSGCAHVAALPVISEHVSADGTV 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E+VFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEI+ QL
Sbjct: 79  KWLFDVGDGNAVESVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTSGEIVAQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR     ++ +Q +R I+N+VMMGMGEPL NY + + AL+ +L DH YGLSRR 
Sbjct: 139 WFAEHALR----ARLGTQ-ERVISNVVMMGMGEPLQNYTALVPALRTMLDDHGYGLSRRR 193

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           + +STSG++PM+D+L+Q+C V +AVSLHA N+ LR++LVP+++KYPL+EL+ AC RY+ +
Sbjct: 194 LTVSTSGVVPMMDRLSQDCAVAMAVSLHAPNDALRDQLVPLNRKYPLRELLDACTRYLEH 253

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMR-KNKILTSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R +      CK NLIPFN FP S L  S  
Sbjct: 254 APRDFITFEYCMLDGVNDQPEHARQLIDLVRPRGAEGVRCKFNLIPFNPFPASGLHRSNP 313

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            ++  FAK+L ++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 314 GQVAAFAKLLSDAGIVTTVRKTRGDDIDAACGQLAGDVKD 353


>gi|121607087|ref|YP_994894.1| radical SAM protein [Verminephrobacter eiseniae EF01-2]
 gi|205829923|sp|A1WE19.1|RLMN_VEREI RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|121551727|gb|ABM55876.1| radical SAM enzyme, Cfr family [Verminephrobacter eiseniae EF01-2]
          Length = 391

 Score =  391 bits (1004), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/338 (54%), Positives = 242/338 (71%), Gaps = 8/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF+ M+DL+ +LR KLK    ++AP ++S Q S DG+ K
Sbjct: 21  LGEKRFRATQLFRWIHQRGASDFDAMSDLARALRDKLKGCARVQAPPVISGQASADGSVK 80

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +E VFIPE  R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEII QLW
Sbjct: 81  WLFDVGAGNAVEAVFIPEDERGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSSGEIIAQLW 140

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E  LRR    +      R I+N+VMMGMGEPL N  + + AL+++L DH YGLSRR V
Sbjct: 141 FAEHALRRRLKTE-----DRVISNLVMMGMGEPLQNLAALLPALRVMLDDHGYGLSRRRV 195

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++PMID+LA++CPV LAVSLHA N+ LR++LVP+++KYP+ EL+ AC RY+ ++
Sbjct: 196 TVSTSGVVPMIDRLARDCPVALAVSLHAPNDALRDQLVPLNRKYPIDELLQACKRYLAHA 255

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND   HA +L+ L+ +  I   CK NLIPFN FP S L+ S + +
Sbjct: 256 PRDFITFEYCMLDGVNDQIGHARQLVELVGRAAI--RCKFNLIPFNPFPASGLLRSAHDQ 313

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           I  FA++L  +GI  T+RK RG+DI AACGQL+G+  D
Sbjct: 314 ILAFAQVLGAAGIVTTVRKTRGDDIAAACGQLAGDVRD 351


>gi|313668447|ref|YP_004048731.1| hypothetical protein NLA_11430 [Neisseria lactamica 020-06]
 gi|313005909|emb|CBN87365.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 364

 Score =  391 bits (1004), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/344 (53%), Positives = 240/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G  +F++MTDL+ SLR KL     I  P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWIHQSGAQNFDEMTDLAKSLRHKLNEQANIGIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACRRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI+L++       CK NLIPFN FPNS    S   
Sbjct: 253 APRDFITFEYVMLDGINDKAQHAHELINLVKD----VPCKFNLIPFNPFPNSGYERSSKE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFKDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|407793025|ref|ZP_11140060.1| GTP-binding protein Der [Idiomarina xiamenensis 10-D-4]
 gi|407215385|gb|EKE85224.1| GTP-binding protein Der [Idiomarina xiamenensis 10-D-4]
          Length = 479

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/440 (45%), Positives = 280/440 (63%), Gaps = 12/440 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+       FI+IDTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQANYDGFRFILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+ QAI+E+D+++F+VDGR G+   D+ I N LRK  +  +L+ NK
Sbjct: 61  NGD-EEGIDLRMAEQSLQAIVEADVVLFLVDGRDGVTVADQAIANHLRKQNKNTLLICNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
            + I+  +   DFY L +G    I+A +G G++  LE  L  +   Y +     E     
Sbjct: 120 IDGIDEQAAGADFYSLAMGEVFGIAAAHGRGVQKMLETALRPLAEQYPEVIVNSEEEVSS 179

Query: 179 SIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
            +E+         +K+AIVG+PNVGKSTL N +LGE RV+ +D PGTTRDS+    + N 
Sbjct: 180 DLEHDQIDYQALPLKLAIVGRPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPMQRNE 239

Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
           + YILIDTAG+RRR K  E IEKFSVIKTL++I +ANVV+ ++DA++ IS QD+N+  F 
Sbjct: 240 RDYILIDTAGVRRRGKIGEAIEKFSVIKTLQAIEDANVVLAVIDARETISDQDLNLIGFA 299

Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
             +GRS+++ VNKWD +  + +  IK  + ++L F+ FA  +FISA+    +    ES+ 
Sbjct: 300 LNAGRSIVIAVNKWDGLTQDHKDEIKRELDRRLGFVDFARVHFISALHGTGVGHLFESVE 359

Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
             Y S+   + TS++TR +  A   H P      R KL+YAH GG NPP ++IHGN++  
Sbjct: 360 EAYASATQRVGTSKLTRIMEMAQDEHQPPLVSGRRVKLKYAHAGGYNPPRVIIHGNQVND 419

Query: 410 IGNDYKRYLEKYFYRTFSLI 429
           +   Y+RYL  YF R   ++
Sbjct: 420 LPGSYQRYLTNYFRRALGVM 439


>gi|90410877|ref|ZP_01218891.1| GTP-binding protein EngA [Photobacterium profundum 3TCK]
 gi|90328090|gb|EAS44401.1| GTP-binding protein EngA [Photobacterium profundum 3TCK]
          Length = 493

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/455 (43%), Positives = 292/455 (64%), Gaps = 30/455 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   + +  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR   +P  LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTVSDEAIAKHLRSREKPTFLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE------ 173
            + I++ S   +F++LG+   + ++A +  G+   +E  L    P+ +  K  +      
Sbjct: 120 IDGIDADSACAEFWKLGVDAMYQVAAAHNRGVTALMERALA---PFAESLKDNDEEGLID 176

Query: 174 FTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
            T++  IE                    IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 177 LTSVEDIEKADLTEEDAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 236

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    E + ++Y+LIDTAG+RRR    + +EKFSVI+TLK++ +ANVV+L++DA
Sbjct: 237 GTTRDSIYIPMERDGQEYVLIDTAGVRRRKNMNQAVEKFSVIQTLKAVEDANVVLLIIDA 296

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++NIS QD+++  F+  SGRSL++ VNKWD + +  ++ +K+ + ++L F+ FA  +FIS
Sbjct: 297 RENISDQDLSLLGFVLNSGRSLVLAVNKWDGLDNEVKERVKSELDRRLGFIDFARIHFIS 356

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+    +    +S+   Y S+   +STS +TR +  A  +H P   +  R KL+YAH GG
Sbjct: 357 ALHGTGVGHLYDSVIEAYQSATKRISTSLLTRIMQMAQDDHQPPMVRGRRVKLKYAHAGG 416

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPIIVIHGN++  +   YKRYL  Y+ R+  ++
Sbjct: 417 YNPPIIVIHGNQVNELPASYKRYLMNYYRRSLEMM 451


>gi|407688440|ref|YP_006803613.1| GTP-binding protein Der [Alteromonas macleodii str. 'Balearic Sea
           AD45']
 gi|407291820|gb|AFT96132.1| GTP-binding protein Der [Alteromonas macleodii str. 'Balearic Sea
           AD45']
          Length = 481

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/444 (44%), Positives = 293/444 (65%), Gaps = 19/444 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+    K+ FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  EM +Q+  AI E+D+++F+VD R G++  D+ I + LR+  + + +V NK
Sbjct: 61  TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRINKKVFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            + I+  S S +FY LG+G+   I+A +G G+   L++ L    P +  F          
Sbjct: 120 VDGIDGDSESAEFYSLGLGDIKQIAAAHGRGVSQLLQDALK---PLESDFPDMEIVDEEP 176

Query: 172 ----KEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
                  T    ++   IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+    
Sbjct: 177 EEEEDAETQRQRLQELPIKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPM 236

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E + ++YILIDTAG+R+R K  E +EKFS++KTL++I EANVV+L++DA++ I+ QD+++
Sbjct: 237 ERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLSL 296

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F+  SGRSL+V VNKWD +  + +  IK  + ++L F+ FA  +FISA+  + + +  
Sbjct: 297 LGFVLNSGRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFISALHGSGVGNLF 356

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           ES+   Y S+   ++T+ +T+ +  A  +H P   +  R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHGN 416

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           ++  + + YKR+L  YF +   ++
Sbjct: 417 QVDDLPSSYKRFLMNYFRKALEIM 440


>gi|406597499|ref|YP_006748629.1| GTP-binding protein Der [Alteromonas macleodii ATCC 27126]
 gi|406374820|gb|AFS38075.1| GTP-binding protein Der [Alteromonas macleodii ATCC 27126]
          Length = 481

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/444 (44%), Positives = 293/444 (65%), Gaps = 19/444 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+    K+ FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  EM +Q+  AI E+D+++F+VD R G++  D+ I + LR+  + + +V NK
Sbjct: 61  TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRINKKVFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            + I+  S S +FY LG+G+   I+A +G G+   L++ L    P +  F          
Sbjct: 120 VDGIDGDSESAEFYSLGLGDIKQIAAAHGRGVSQLLQDALK---PLESDFPDMEIIDEEP 176

Query: 172 ----KEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
                  T    ++   IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+    
Sbjct: 177 EEEEDAETQRQRLQELPIKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPM 236

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E + ++YILIDTAG+R+R K  E +EKFS++KTL++I EANVV+L++DA++ I+ QD+++
Sbjct: 237 ERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLSL 296

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F+  SGRSL+V VNKWD +  + +  IK  + ++L F+ FA  +FISA+  + + +  
Sbjct: 297 LGFVLNSGRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFISALHGSGVGNLF 356

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           ES+   Y S+   ++T+ +T+ +  A  +H P   +  R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHGN 416

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           ++  + + YKR+L  YF +   ++
Sbjct: 417 QVDDLPSSYKRFLMNYFRKALEIM 440


>gi|90021085|ref|YP_526912.1| GTP-binding protein EngA [Saccharophagus degradans 2-40]
 gi|123396308|sp|Q21KS9.1|DER_SACD2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|89950685|gb|ABD80700.1| Small GTP-binding protein domain [Saccharophagus degradans 2-40]
          Length = 471

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/429 (47%), Positives = 280/429 (65%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P L LVGRPNVGKSTLFNRLT SRDA+VAN+ GLTRDR YGE   G K FI++DTGG 
Sbjct: 1   MIPTLALVGRPNVGKSTLFNRLTRSRDAIVANFSGLTRDRQYGEATHGDKRFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M  Q+ QAI E+D++ FIVD R GL   D  I   LR   +PI L+ NK
Sbjct: 61  SGE-EEGIDSYMAGQSLQAIEEADMVAFIVDARVGLTAADMQIAQHLRTCNKPIFLLANK 119

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +N SI    F+ELG+G+   I+A +G  I   L+ +L    P      + E +    
Sbjct: 120 VDGVNESIVCAPFFELGLGDVIGIAAAHGRNINTMLDTVLENVEP------EAEASEEDK 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + IK+AIVG+PNVGKSTL+N +LGE+RV+ YD PGTTRDSI   +E + K Y +IDTAG
Sbjct: 174 AKGIKLAIVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSIYIEYERDGKAYTIIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR      +EKFS++KTL++I +ANVVIL++DAQ+ I  QD+++   + +SGR+L+V 
Sbjct: 234 VRRRKNIKLSVEKFSIVKTLQAIDDANVVILVMDAQEGIVDQDLHLMGHVIDSGRALVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++ ++ +  +K  + ++L F+ FA  +FISA+    +    +S++  Y S+   L
Sbjct: 294 LNKWDNLDNDHKSYVKTELSRRLQFVDFADLHFISALHGTGVGDLYKSVHKAYSSATEKL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T+ +T+ L  A+  H P      R KLRYAH GG+NPPIIVIHGN+   +  +Y RYLE
Sbjct: 354 NTNFLTKILEFAVSQHQPPLVNGRRIKLRYAHAGGQNPPIIVIHGNQTAAVPKNYVRYLE 413

Query: 420 KYFYRTFSL 428
           K F +   L
Sbjct: 414 KIFRKELEL 422


>gi|386287230|ref|ZP_10064405.1| GTP-binding protein Der [gamma proteobacterium BDW918]
 gi|385279762|gb|EIF43699.1| GTP-binding protein Der [gamma proteobacterium BDW918]
          Length = 469

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 282/430 (65%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVAN+PGLTRDR YGE   G + +I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDALVANFPGLTRDRKYGEASHGSRRYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+ QAI E+D ++ ++D R GL+  D+ +   LR   +P+  V NK
Sbjct: 61  NGD-EEGIDGPMAQQSMQAIDEADAVLLMLDSRAGLMPADEGLIKHLRSCSKPVFFVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++ ++  +FY+ G  + + ++A  G G++  ++++L       KF ++ E      
Sbjct: 120 VDGVDAEVAKAEFYKTGAEHIYPLTATQGKGVRALMDDVLA------KFPQEAEDKQASL 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               K+AIVG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+   +E   + Y LIDTAG
Sbjct: 174 ATGKKIAIVGRPNVGKSTLVNRMLGEDRVVVYDQPGTTRDSVYINYEREGEDYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IR+R    E +EKFS++KTLK+I +A+VVIL++D +++I  QD+++   + +SGR+++V 
Sbjct: 234 IRKRKHISEAVEKFSIVKTLKAIDDAHVVILVMDGRESIVDQDLHLLGQVVDSGRAVVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  +Q+  IK+ + ++L F+ FA  +FISA+    +    ES+   Y+S+   L
Sbjct: 294 INKWDGLTADQKNHIKSELDRRLQFIDFAEIHFISALHGTGVGHLYESVEKAYESATRQL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T  +T  L  A+  H P      R KLRYAH GG+NPPIIVIHGN+ + +   Y RYLE
Sbjct: 354 QTRMLTTILEGAVHGHSPPMINGRRIKLRYAHPGGQNPPIIVIHGNQTEKVPGSYTRYLE 413

Query: 420 KYFYRTFSLI 429
           K F R   ++
Sbjct: 414 KVFRRELKMM 423


>gi|407700806|ref|YP_006825593.1| GTP-binding protein Der [Alteromonas macleodii str. 'Black Sea 11']
 gi|407249953|gb|AFT79138.1| GTP-binding protein Der [Alteromonas macleodii str. 'Black Sea 11']
          Length = 481

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/444 (44%), Positives = 293/444 (65%), Gaps = 19/444 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+    K+ FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  EM +Q+  AI E+D+++F+VD R G++  D+ I + LR+  + + +V NK
Sbjct: 61  TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRINKKVFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            + I+  S S +FY LG+G+   I+A +G G+   L++ L    P +  F          
Sbjct: 120 VDGIDGDSESAEFYSLGLGDIKQIAAAHGRGVSQLLQDALK---PLESDFPDMEIVDEEP 176

Query: 172 ----KEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
                  T    ++   IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+    
Sbjct: 177 EEEEDAETQRQRLQKLPIKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPM 236

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E + ++YILIDTAG+R+R K  E +EKFS++KTL++I EANVV+L++DA++ I+ QD+++
Sbjct: 237 ERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLSL 296

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F+  SGRSL+V VNKWD +  + +  IK  + ++L F+ FA  +FISA+  + + +  
Sbjct: 297 LGFVLNSGRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFISALHGSGVGNLF 356

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           ES+   Y S+   ++T+ +T+ +  A  +H P   +  R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHGN 416

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           ++  + + YKR+L  YF +   ++
Sbjct: 417 QVDDLPSSYKRFLMNYFRKALEIM 440


>gi|452880499|ref|ZP_21957466.1| GTP-binding protein Der [Pseudomonas aeruginosa VRFPA01]
 gi|452183081|gb|EME10099.1| GTP-binding protein Der [Pseudomonas aeruginosa VRFPA01]
          Length = 492

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/445 (44%), Positives = 287/445 (64%), Gaps = 17/445 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R G+   D++I   LRK  +   L+ NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLIANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
            + I+  ++  +F  LG+G+   I+A +G GI + L+  L I            E   ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNAEEEGEGEPASEE 179

Query: 168 FFKKKEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
             + +E T I      + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI   
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
           FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   D+N
Sbjct: 240 FERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+ E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +   
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            +S+   + S++    TSR+T  L  A++ H P      R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  +   Y RYLEK + R   L+
Sbjct: 420 NQVDAVPKAYTRYLEKTYRRVLKLV 444


>gi|15598994|ref|NP_252488.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAO1]
 gi|107103319|ref|ZP_01367237.1| hypothetical protein PaerPA_01004388 [Pseudomonas aeruginosa PACS2]
 gi|152985588|ref|YP_001346699.1| GTP-binding protein EngA [Pseudomonas aeruginosa PA7]
 gi|254236703|ref|ZP_04930026.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254242490|ref|ZP_04935812.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|313109217|ref|ZP_07795185.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016]
 gi|355639724|ref|ZP_09051334.1| GTP-binding protein engA [Pseudomonas sp. 2_1_26]
 gi|386057206|ref|YP_005973728.1| GTP-binding protein EngA [Pseudomonas aeruginosa M18]
 gi|386067890|ref|YP_005983194.1| GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
 gi|392982474|ref|YP_006481061.1| GTP-binding protein Der [Pseudomonas aeruginosa DK2]
 gi|416865663|ref|ZP_11915775.1| GTP-binding protein Der [Pseudomonas aeruginosa 138244]
 gi|418585962|ref|ZP_13150008.1| GTP-binding protein Der [Pseudomonas aeruginosa MPAO1/P1]
 gi|418589839|ref|ZP_13153758.1| GTP-binding protein Der [Pseudomonas aeruginosa MPAO1/P2]
 gi|420138001|ref|ZP_14645944.1| GTP-binding protein EngA [Pseudomonas aeruginosa CIG1]
 gi|421152389|ref|ZP_15611969.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 14886]
 gi|421158391|ref|ZP_15617650.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 25324]
 gi|421165950|ref|ZP_15624228.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 700888]
 gi|421179031|ref|ZP_15636628.1| GTP-binding protein EngA [Pseudomonas aeruginosa E2]
 gi|421518344|ref|ZP_15965018.1| GTP-binding protein Der [Pseudomonas aeruginosa PAO579]
 gi|424939334|ref|ZP_18355097.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa NCMG1179]
 gi|451985685|ref|ZP_21933898.1| GTP-binding protein EngA [Pseudomonas aeruginosa 18A]
 gi|26006739|sp|Q9HXJ8.1|DER_PSEAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166225840|sp|A6V0W4.1|DER_PSEA7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|9949972|gb|AAG07186.1|AE004798_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126168634|gb|EAZ54145.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126195868|gb|EAZ59931.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|150960746|gb|ABR82771.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
 gi|310881687|gb|EFQ40281.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016]
 gi|334834347|gb|EGM13318.1| GTP-binding protein Der [Pseudomonas aeruginosa 138244]
 gi|346055780|dbj|GAA15663.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa NCMG1179]
 gi|347303512|gb|AEO73626.1| GTP-binding protein EngA [Pseudomonas aeruginosa M18]
 gi|348036449|dbj|BAK91809.1| GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
 gi|354831772|gb|EHF15779.1| GTP-binding protein engA [Pseudomonas sp. 2_1_26]
 gi|375043636|gb|EHS36252.1| GTP-binding protein Der [Pseudomonas aeruginosa MPAO1/P1]
 gi|375051375|gb|EHS43844.1| GTP-binding protein Der [Pseudomonas aeruginosa MPAO1/P2]
 gi|392317979|gb|AFM63359.1| GTP-binding protein Der [Pseudomonas aeruginosa DK2]
 gi|403249266|gb|EJY62779.1| GTP-binding protein EngA [Pseudomonas aeruginosa CIG1]
 gi|404347826|gb|EJZ74175.1| GTP-binding protein Der [Pseudomonas aeruginosa PAO579]
 gi|404525149|gb|EKA35425.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 14886]
 gi|404539453|gb|EKA48934.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 700888]
 gi|404547549|gb|EKA56543.1| GTP-binding protein EngA [Pseudomonas aeruginosa E2]
 gi|404549678|gb|EKA58525.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 25324]
 gi|451756734|emb|CCQ86421.1| GTP-binding protein EngA [Pseudomonas aeruginosa 18A]
 gi|453043521|gb|EME91251.1| GTP-binding protein Der [Pseudomonas aeruginosa PA21_ST175]
          Length = 493

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/445 (44%), Positives = 287/445 (64%), Gaps = 17/445 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R G+   D++I   LRK  +   L+ NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLIANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
            + I+  ++  +F  LG+G+   I+A +G GI + L+  L I            E   ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNAEEEGEGEPASEE 179

Query: 168 FFKKKEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
             + +E T I      + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI   
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
           FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   D+N
Sbjct: 240 FERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+ E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +   
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            +S+   + S++    TSR+T  L  A++ H P      R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  +   Y RYLEK + R   L+
Sbjct: 420 NQVDAVPKAYTRYLEKTYRRVLKLV 444


>gi|71065252|ref|YP_263979.1| GTP-binding protein EngA [Psychrobacter arcticus 273-4]
 gi|123649239|sp|Q4FTW3.1|DER_PSYA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|71038237|gb|AAZ18545.1| putative GTP-binding protein, HSR1-related protein [Psychrobacter
           arcticus 273-4]
          Length = 473

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/430 (44%), Positives = 288/430 (66%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           +KPV+ L+GRPNVGKSTLFN+ T SR ALVA+  GLTRDR YG+     K+FI++DTGG 
Sbjct: 3   IKPVVALIGRPNVGKSTLFNQFTKSRQALVADLSGLTRDRQYGDATYEDKAFIVVDTGGI 62

Query: 61  -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
            E +  +G + + M++Q+  AI E+DII+F+VD R G++  D  I  FL   G+P+ +V 
Sbjct: 63  GEADDGRGDIDDYMSEQSYTAIHEADIIVFVVDARAGMIGADAEIGKFLHTLGKPVYVVA 122

Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           NK + ++ S   +FY LG+G P+ ++A +G G+ N LE +LT ++P ++        NI 
Sbjct: 123 NKVDGVHDSAPAEFYALGLGEPYPMAASHGRGVGNLLE-VLTADMPNQE--------NII 173

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   ++ + K Y+LIDTA
Sbjct: 174 EPRGLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPYKRDGKDYVLIDTA 233

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K  E +EKFSVIKTL++I ++NV ++++DA + I  QD+++  +  ++GR+L+V
Sbjct: 234 GVRRRGKIDEKVEKFSVIKTLQAIEDSNVTVIVIDAHEGIVDQDLHMIGYALDAGRALVV 293

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +  +Q+  IK  + ++ NF+ +   + ISA+    + +   SI   Y SS+  
Sbjct: 294 AINKWDGLTADQKNYIKIEMDRRFNFIPYVKVHQISALHGTGVGNLYPSILRAYQSSMFE 353

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST+R+T+ L  A+  +PP      R KLRYAH GG NPP+IVIHGN+   +   Y+RYL
Sbjct: 354 VSTNRLTQILQDAVTANPPPTVAGRRIKLRYAHIGGHNPPVIVIHGNQTGSLPKSYQRYL 413

Query: 419 EKYFYRTFSL 428
           E  F + F L
Sbjct: 414 ENQFRQVFKL 423


>gi|56476109|ref|YP_157698.1| histidyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81677555|sp|Q5P7B4.1|SYH_AROAE RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|56312152|emb|CAI06797.1| histidyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 438

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 177/352 (50%), Positives = 258/352 (73%), Gaps = 7/352 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTAS +R+ I++ ++  G +RL+Y GPMFRHE
Sbjct: 63   GEVTDIVEKEMYSFEDALNGEQLTLRPEGTASCVRAAIQHKMLSAGAQRLYYHGPMFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIGVEA+GF GPDIDAE I+MC+RLW +  L+++ LELNS+G+ +ER +
Sbjct: 123  RPQKGRYRQFHQIGVEALGFDGPDIDAEHILMCARLWDDFGLEDVRLELNSLGSSDERAR 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +L+ Y+++H++     +D +  L+ N LR+LD+KN  +++++ NAPKLLD+L +DSL
Sbjct: 183  HRAELVAYLERHRER--LDDDGRRRLHTNPLRILDTKNPELQDLVDNAPKLLDFLGEDSL 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L    + Y+IN +LVRG+DYYNRTVFEW T +LG+Q ++C GGRYD L+++
Sbjct: 241  KHFNGVQVLLKDAGVPYRINHRLVRGLDYYNRTVFEWVTTRLGAQGTVCAGGRYDGLVEQ 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               +  PA+GFA+GIERL+ L ++       + Q D+Y+VH+G++A+  AF  +E LR+ 
Sbjct: 301  LGGRPAPAAGFAMGIERLLALWRESGGEAEPA-QPDVYVVHLGEQAQRLAFRAAEALRSH 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            G  V+++C       SFKSQMK+A+AS A  A +IG++E     + +K LR 
Sbjct: 360  GFAVLMHCGGG----SFKSQMKKADASGAPVAVVIGDDEAATGEVGLKPLRG 407


>gi|291613878|ref|YP_003524035.1| radical SAM enzyme, Cfr family [Sideroxydans lithotrophicus ES-1]
 gi|291583990|gb|ADE11648.1| radical SAM enzyme, Cfr family [Sideroxydans lithotrophicus ES-1]
          Length = 359

 Score =  390 bits (1003), Expect = e-105,   Method: Composition-based stats.
 Identities = 184/343 (53%), Positives = 247/343 (72%), Gaps = 11/343 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E GE PFRA+Q+ +WI+K G SDF+ M+DL++SLR+KLK    I++P +M ++ + DGTR
Sbjct: 18  EHGEKPFRARQVLRWIYKGGESDFDAMSDLAISLREKLKLIACIQSPKVMREETASDGTR 77

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE+ R TLC+STQ GCA++C FCSTG+QGF RNL+  EIIGQ+
Sbjct: 78  KWLLDVGTGNAVETVFIPEEGRGTLCVSTQAGCALDCAFCSTGKQGFNRNLSTAEIIGQV 137

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W    +L ++      + G   +TN+V+MGMGEPLLN+ +T+ AL+L+L D+AYGLSRR 
Sbjct: 138 WWANRELGKD------ADGNWPVTNVVLMGMGEPLLNFDNTVNALRLMLDDNAYGLSRRR 191

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L  ECPV LA+SLHA N+ LRN LVPI++KYPL+EL+ AC RY+  
Sbjct: 192 VTVSTSGVVPAMDRLRDECPVALAISLHAPNDALRNVLVPINQKYPLQELMAACQRYLEK 251

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEY ML G+ND+  HA ELI L+R       CK NLIPFN FP +    S   
Sbjct: 252 APRDFVTFEYVMLAGVNDSVQHARELIELVRD----VPCKFNLIPFNPFPQAPYQRSDMP 307

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
            +  F  +LM +GI  TIRK+RG+DI AACGQL+G+  D  K+
Sbjct: 308 TVLRFRDVLMQAGIVTTIRKVRGDDIAAACGQLAGQVQDKTKR 350


>gi|399115746|emb|CCG18549.1| ribosomal RNA large subunit methyltransferase [Taylorella
           equigenitalis 14/56]
          Length = 378

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/342 (54%), Positives = 242/342 (70%), Gaps = 5/342 (1%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRAKQL  WIH+ G S+F+ MT+L+   RK L     I  P  ++ Q+S D
Sbjct: 20  LVAKWGHKPFRAKQLMNWIHQKGESNFSNMTNLANDFRKNLAEFAEISVPKELTKQVSTD 79

Query: 592 GTRKWIFHVKKN-IIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GT KW+F V+ N  IETVFIPE +R TLCIS+Q GC + C FCSTG QGF RNLT  EII
Sbjct: 80  GTTKWLFDVQNNNAIETVFIPEDDRGTLCISSQAGCTVACRFCSTGHQGFNRNLTTSEII 139

Query: 651 GQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLS 710
           GQ+W+   ++           G R I+N+V MGMGEPLLNY   + A+K+++  +AYGLS
Sbjct: 140 GQVWLARKEILNSSTDIQKLPGDRVISNVVFMGMGEPLLNYDQVLPAVKMLVDQNAYGLS 199

Query: 711 RRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRY 770
           RR V +STSG+IP +DKL+Q+CPV LAVSLHA N+ LR++L+P++KKYPLKELI AC+RY
Sbjct: 200 RRRVTVSTSGVIPFMDKLSQDCPVALAVSLHAPNDALRDQLIPLNKKYPLKELIDACNRY 259

Query: 771 ITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICS 830
           I ++PR  ITFEY ML  +NDTDIHA +LI + R+ K     K+NLIPFN FP S L  S
Sbjct: 260 IEFAPRDFITFEYIMLEDVNDTDIHANQLIEICREVK----SKVNLIPFNPFPESGLKRS 315

Query: 831 KNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            + R+K F+ IL ++GI  T RK RG+DI+AACGQL+G+  D
Sbjct: 316 SSQRVKAFSAILNDAGIVATTRKTRGDDIDAACGQLAGDIKD 357


>gi|120610108|ref|YP_969786.1| radical SAM protein [Acidovorax citrulli AAC00-1]
 gi|205829658|sp|A1TM24.1|RLMN_ACIAC RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|120588572|gb|ABM32012.1| 23S rRNA m(2)A-2503 methyltransferase [Acidovorax citrulli AAC00-1]
          Length = 373

 Score =  390 bits (1003), Expect = e-105,   Method: Composition-based stats.
 Identities = 184/340 (54%), Positives = 248/340 (72%), Gaps = 7/340 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF +M+DL+ SLR+KL    ++ A  ++S+ +S DGT 
Sbjct: 19  QLGEKRFRAVQLFRWIHQRGASDFARMSDLAKSLREKLSGCAHVAALPVISEHVSADGTV 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E+VFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNLT GEI+ QL
Sbjct: 79  KWLFDVGDGNAVESVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTSGEIVAQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR     ++ +Q +R I+N+VMMGMGEPL NY + + AL+ +L DH YGLSRR 
Sbjct: 139 WFAEHALR----ARLGTQ-ERVISNVVMMGMGEPLQNYTALVPALRTMLDDHGYGLSRRR 193

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           + +STSG++PM+D+L+Q+C V +AVSLHA N+ LR++LVP+++KYPL+EL+ AC RY+ +
Sbjct: 194 LTVSTSGVVPMMDRLSQDCAVAMAVSLHAPNDALRDQLVPLNRKYPLRELLDACTRYLEH 253

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMR-KNKILTSCKINLIPFNCFPNSNLICSKN 832
           +PR  ITFEYCML G+ND   HA +LI L+R +      CK NLIPFN FP S L  S  
Sbjct: 254 APRDFITFEYCMLDGVNDQPEHARQLIDLVRPRGGEGVRCKFNLIPFNPFPASGLHRSNP 313

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            ++  FAK+L ++GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 314 QQVAAFAKMLSDAGIVTTVRKTRGDDIDAACGQLAGDVKD 353


>gi|332140453|ref|YP_004426191.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
 gi|332141960|ref|YP_004427698.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
 gi|410862365|ref|YP_006977599.1| GTP-binding protein Der [Alteromonas macleodii AltDE1]
 gi|238693251|sp|B4RV85.1|DER_ALTMD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|327550475|gb|AEA97193.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551982|gb|AEA98700.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
 gi|410819627|gb|AFV86244.1| GTP-binding protein Der [Alteromonas macleodii AltDE1]
          Length = 481

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/445 (44%), Positives = 292/445 (65%), Gaps = 21/445 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+    K+ FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  EM +Q+  AI E+D+++F+VD R GL+  D+ I + LR+  + I +V NK
Sbjct: 61  TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGLLPADQGIADHLRRINKQIFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            + I+  S S +FY LG+G    I+A +G G+   L++ L    P +  F          
Sbjct: 120 VDGIDGDSESAEFYSLGLGAIKQIAAAHGRGVSQLLQDALK---PLESDFPDMEIIDEAP 176

Query: 172 -------KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
                   +   +  +  IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDS+   
Sbjct: 177 EEEEDAESQRQRLQELP-IKLAIVGKPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIP 235

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
            E + ++YILIDTAG+R+R K  E +EKFS++KTL++I EANVV+L++DA++ I+ QD++
Sbjct: 236 MERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLS 295

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+  SGRSL+V VNKWD +  + +  IK  + ++L F+ FA  +FISA+  + + + 
Sbjct: 296 LLGFVLNSGRSLVVAVNKWDGLSTDIKDDIKREMDRRLGFIDFARIHFISALHGSGVGNL 355

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            ES+   Y S+   ++T+ +T+ +  A  +H P   +  R K++YAH GG NPP+IVIHG
Sbjct: 356 FESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHG 415

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  + + YKR+L  YF +   ++
Sbjct: 416 NQVDDLPSSYKRFLMNYFRKALEIM 440


>gi|407684512|ref|YP_006799686.1| GTP-binding protein Der [Alteromonas macleodii str. 'English
           Channel 673']
 gi|407246123|gb|AFT75309.1| GTP-binding protein Der [Alteromonas macleodii str. 'English
           Channel 673']
          Length = 481

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/444 (44%), Positives = 293/444 (65%), Gaps = 19/444 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+    K+ FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  EM +Q+  AI E+D+++F+VD R G++  D+ I + LR+  + + +V NK
Sbjct: 61  TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRINKKVFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            + I+  S S +FY LG+G+   I+A +G G+   L++ L    P +  F          
Sbjct: 120 VDGIDGDSESAEFYSLGLGDIKQIAAAHGRGVSQLLQDALK---PLESNFPDMEIVDEEP 176

Query: 172 ----KEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
                  T    ++   IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+    
Sbjct: 177 EEEEDAETQRQRLQELPIKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPM 236

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E + ++YILIDTAG+R+R K  E +EKFS++KTL++I EANVV+L++DA++ I+ QD+++
Sbjct: 237 ERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLSL 296

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F+  SGRSL+V VNKWD +  + +  IK  + ++L F+ FA  +FISA+  + + +  
Sbjct: 297 LGFVLNSGRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFISALHGSGVGNLF 356

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           ES+   Y S+   ++T+ +T+ +  A  +H P   +  R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHGN 416

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           ++  + + YKR+L  YF +   ++
Sbjct: 417 QVDDLPSSYKRFLMNYFRKALEIM 440


>gi|261212137|ref|ZP_05926423.1| GTP-binding protein EngA [Vibrio sp. RC341]
 gi|260838745|gb|EEX65396.1| GTP-binding protein EngA [Vibrio sp. RC341]
          Length = 494

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/456 (42%), Positives = 295/456 (64%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +P +LV+NK
Sbjct: 61  DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
            + I++ + S +F++LG+   + I+  +G G+   ++  L    P+ +  + ++      
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIATAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176

Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
           TN    E                      IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + + ++Y+LIDTAG+RRR +  E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   SGRS+++ VNKWD +  + ++ +K  + ++L F+ FA  +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSIDVKEHVKKELDRRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIM 452


>gi|261401249|ref|ZP_05987374.1| radical SAM enzyme, Cfr family [Neisseria lactamica ATCC 23970]
 gi|269208732|gb|EEZ75187.1| radical SAM enzyme, Cfr family [Neisseria lactamica ATCC 23970]
          Length = 364

 Score =  390 bits (1002), Expect = e-105,   Method: Composition-based stats.
 Identities = 184/344 (53%), Positives = 241/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G  +F++MTDL+ SLR KL     I  P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWIHQSGAQNFDEMTDLAKSLRHKLNEQANIGIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + +L ++L DH YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTSLSIMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLRDVMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACRRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML GIND   HA ELI+L++       CK NLIPFN FPNS    S   
Sbjct: 253 APRDFITFEYVMLDGINDKAQHAHELINLVKD----VPCKFNLIPFNPFPNSGYERSSKE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFKDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|406038663|ref|ZP_11046018.1| GTP-binding protein Der [Acinetobacter ursingii DSM 16037 = CIP
           107286]
          Length = 469

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/429 (44%), Positives = 291/429 (67%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E + GI   M +Q+K AI E+DIIIF+VD R GL+  D+ I   +R  G+ I LV NK
Sbjct: 61  G-ESEAGIDAYMAEQSKTAINEADIIIFVVDARAGLLASDEQIAREIRSLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  ++ +FY+LG G P  ++A +G G+   LE++L  ++P  +  ++ +      
Sbjct: 120 VDGVHAEAAVVEFYKLGFGEPIHVAASHGRGVAQMLEDVLE-DVPEDENPEEHDKNT--- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   +E + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEERVVAFDEPGTTRDSIYIPYERDGRQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K  E+IEKFS++KTL++I +A+V++++LDA++ +  QD+++  +  E+GR+++V 
Sbjct: 234 VRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     SI+  YDSS + +
Sbjct: 294 INKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGELYPSIHRAYDSSHLKV 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S +++T+ L  A   H P      R K+RYAH GG+NPP IVIHGN++     DY+RYLE
Sbjct: 354 SPAKLTQILNDATDAHQPPMISGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413

Query: 420 KYFYRTFSL 428
             F + + L
Sbjct: 414 NVFRKVYKL 422


>gi|374852470|dbj|BAL55402.1| hypothetical conserved protein [uncultured beta proteobacterium]
          Length = 382

 Score =  390 bits (1002), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/348 (53%), Positives = 246/348 (70%), Gaps = 10/348 (2%)

Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
           GE PFRA+Q+ +WIH+ GV+DF  M+D++ +LR +L  S  I  P ++SD++S DGTRKW
Sbjct: 32  GEKPFRARQVYRWIHRMGVADFAAMSDVAKTLRAQLAQSASITPPRVISDRVSSDGTRKW 91

Query: 597 IFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
           +  V + N +ETVFIPE++R TLCISTQ GCA+ C FC+TG+QGF RNLT GEI+GQLW+
Sbjct: 92  LLDVGQGNAVETVFIPERSRGTLCISTQAGCALECAFCATGKQGFNRNLTTGEILGQLWL 151

Query: 656 TEFKLRRE-KNIKIN----SQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLS 710
               L    ++ +++    +   R +TN+VMMGMGEPL NY + + ALK++L D  YGLS
Sbjct: 152 ANHVLGPAYEHARLDDGDWTDNGRVVTNVVMMGMGEPLANYDAVVRALKVMLDDFGYGLS 211

Query: 711 RRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRY 770
           RR V +STSG++P +D+L  ECPV LAVSLHA N+ LR++LVPI+KKYPLKELI AC RY
Sbjct: 212 RRRVTVSTSGLVPAMDRLRAECPVALAVSLHAPNDRLRDELVPINKKYPLKELIAACERY 271

Query: 771 ITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICS 830
           +T SPR  I FEY +L G+ND    A ELI+L R      SCK NLIPFN FP S     
Sbjct: 272 LTASPRDFIMFEYVLLDGVNDNPRDAQELIALTRG----LSCKFNLIPFNPFPGSPFRRP 327

Query: 831 KNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEM 878
              R++ FA+ LM +G   TIR+ RG+D+ AACGQL+G+  D  ++ +
Sbjct: 328 APERVRAFAERLMAAGRLTTIRRTRGDDVAAACGQLAGQVKDRTRRSL 375


>gi|110834717|ref|YP_693576.1| GTP-binding protein [Alcanivorax borkumensis SK2]
 gi|123149362|sp|Q0VNE4.1|DER_ALCBS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|110647828|emb|CAL17304.1| GTP-binding protein, putative [Alcanivorax borkumensis SK2]
          Length = 471

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/430 (43%), Positives = 283/430 (65%), Gaps = 3/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+G +G   + ++DTGG 
Sbjct: 3   MKPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGDGQLGGYLYTVVDTGGI 62

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E   GI   MT Q+ QA+ E+D+++F+VDGR GL   D+ I + LRK  +P  L++NK
Sbjct: 63  G-ENDDGIDVPMTSQSLQAVGEADVVLFMVDGRAGLTAADEQIASELRKLPKPTYLIVNK 121

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +++  ++ +F+ LG+     I+A +G G+ + +E+IL      +   + +  T+   
Sbjct: 122 TDGVDADSAMSEFFALGLTEVLPIAAAHGRGVTSMIEHILEGFTDLELLPEGEHRTSKKP 181

Query: 180 IE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            E  I+VA++G+PNVGKSTLIN +LGE RV+ +D  GTTRDSI+  FE   + Y LIDTA
Sbjct: 182 GEDSIRVAVLGRPNVGKSTLINRMLGEERVVVFDHAGTTRDSIEVPFERMGRAYTLIDTA 241

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K FE++EKFSVIK L+++  A VV++++DA++ I+ QD+++  +  +SGR+L++
Sbjct: 242 GVRRRGKVFEMVEKFSVIKALQAMEAAQVVVVVIDAREGITDQDLHLLGYALDSGRALMI 301

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  + ++ ++ N+ ++L F  +    FISA+    +      +   +DS+ I 
Sbjct: 302 AVNKWDGLEADHKERVRVNLGRRLEFAPWVKIKFISALHGTGVGDLWGMVEQAWDSAFIK 361

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T+ +TR +      HPP R    R KLRYAH GG NPP +V+HGNR + +   YK++L
Sbjct: 362 IGTNELTRMMEEITNGHPPPRNGRFRAKLRYAHLGGNNPPTLVLHGNRTEALPTSYKKFL 421

Query: 419 EKYFYRTFSL 428
           E  F     L
Sbjct: 422 ENRFRELLKL 431


>gi|157961137|ref|YP_001501171.1| GTP-binding protein EngA [Shewanella pealeana ATCC 700345]
 gi|189037162|sp|A8H249.1|DER_SHEPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|157846137|gb|ABV86636.1| small GTP-binding protein [Shewanella pealeana ATCC 700345]
          Length = 490

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/451 (43%), Positives = 283/451 (62%), Gaps = 27/451 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI   M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  L    PY +            
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA---PYAEAMGIVKQEDGDD 176

Query: 170 -----------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTR 218
                       + E   +  +  IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTR
Sbjct: 177 DEEEREYTEEQAEAEQKRLQDLP-IKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTR 235

Query: 219 DSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
           DSI    E   ++Y+LIDTAG+RRR+K  E +EKFSVIKTLK++ ++NVV+L++DA++ I
Sbjct: 236 DSIYIPMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGI 295

Query: 279 SAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKL 338
           + QD+ +  F+  +GR+L++ +NKWD I  N +  +K  + ++L F+ FA  +FISA+  
Sbjct: 296 AEQDLGLLGFVLNAGRALVIAINKWDGIDQNIKDRVKTELDRRLGFIDFARIHFISALHG 355

Query: 339 NNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPP 398
             +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPP
Sbjct: 356 TGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPP 415

Query: 399 IIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           I+V+HGN++K + + YKRY+  YF R+  +I
Sbjct: 416 IVVVHGNQVKKLPDSYKRYMMNYFRRSLKVI 446


>gi|127512226|ref|YP_001093423.1| GTP-binding protein EngA [Shewanella loihica PV-4]
 gi|166225856|sp|A3QCG6.1|DER_SHELP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|126637521|gb|ABO23164.1| small GTP-binding protein [Shewanella loihica PV-4]
          Length = 489

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/450 (43%), Positives = 289/450 (64%), Gaps = 25/450 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA+YPGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI   M +Q+  AI E+D+++F+ D R GL   D+ I   LR+  +   +V NK
Sbjct: 61  DG-TEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADEAIAEHLRRREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +            
Sbjct: 120 VDGIDADSACGEFWALGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGLTRDGEGEE 176

Query: 170 --KKKEFTNIHSIEY--------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
              ++++T   +           IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 177 EADERQYTEEEAEAEQQRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRD 236

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI    E + ++Y++IDTAG+RRR+K  E +EKFSVIKTLK++ +ANVV+L++DA++ I+
Sbjct: 237 SIYIPLERDGQEYVIIDTAGVRRRSKVHETVEKFSVIKTLKAVEDANVVLLVVDAREGIA 296

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+ +  F    GR+L++ VNKWD I  + ++ +K+ + ++L F+ FA  +FISA+   
Sbjct: 297 EQDLGLLGFALNVGRALVIAVNKWDGIDQDVKERVKSELDRRLGFIDFARIHFISALHGT 356

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            +    ES+   Y+S+   +STS +TR +  A  +H P      R KL+YAH GG NPPI
Sbjct: 357 GVGHLFESVEEAYESATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGYNPPI 416

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +VIHGN++K + + YKR++  Y+ R+  ++
Sbjct: 417 VVIHGNQVKKLPDSYKRFMMNYYRRSLKVM 446


>gi|392552317|ref|ZP_10299454.1| GTP-binding protein Der [Pseudoalteromonas spongiae UST010723-006]
          Length = 492

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/452 (43%), Positives = 291/452 (64%), Gaps = 24/452 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQASYEDYEFILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  EM +Q+  AI E+DI++F+VD R GL   D  I + LRK  + + +V NK
Sbjct: 61  DGS-EQGIESEMAEQSLLAIEEADIVMFLVDARAGLTASDIGIADHLRKQQKKVFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT------------------- 160
            + I++ S   +FY+L +G  + I+A +G GI + L+  L                    
Sbjct: 120 IDGIDADSNCAEFYQLALGEVYQIAAAHGRGITSLLDTALQPVIAEYAEAYREANPEEFE 179

Query: 161 ---IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
              ++  Y    + +E    HS + +K+AI+G+PNVGKSTL N +LGE RVI YD PGTT
Sbjct: 180 DDLVDSLYDDENEGEEVDGEHSDKPVKLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTT 239

Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
           RDS+      N K+Y+LIDTAG+R+R K  +V+EKFSVIKTLK+I +ANVV+L++DA++ 
Sbjct: 240 RDSVYIPMTRNEKEYVLIDTAGVRKRKKVSDVVEKFSVIKTLKAIEDANVVLLVIDAREG 299

Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
           IS QD+++  +   +GRSL++ VNKWD +  + +  IK+ + ++L F+ FA  +FISA+ 
Sbjct: 300 ISDQDLSLLGYTLNAGRSLVIAVNKWDGLDTDVKDRIKSELDRRLGFIDFARIHFISALH 359

Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
              +    ES++  Y+S+   +ST+ + R +  A  +H P   +  R KL+YAH GG NP
Sbjct: 360 GTGVGHLFESVDEAYESATKRISTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNP 419

Query: 398 PIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           PIIVIHGN++K + + YKRY+  Y+ +   ++
Sbjct: 420 PIIVIHGNQVKDLPDSYKRYMMNYYRKALKVM 451


>gi|451936487|ref|YP_007460341.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium oncopeltii TCC290E]
 gi|451777410|gb|AGF48385.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium oncopeltii TCC290E]
          Length = 379

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/351 (56%), Positives = 243/351 (69%), Gaps = 19/351 (5%)

Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHV 600
           FR  QL KWIHKF    F+ MT++S  LR KLK    I+A  I S+ +S DGT KW+F  
Sbjct: 30  FRIGQLHKWIHKFSADSFDVMTNISCQLRHKLKEISKIEAMPIESETLSKDGTIKWLFDA 89

Query: 601 -KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTEFK 659
              N IETVFIPEKNR TLCIS+Q GCA+NC FC+TG QGF RNL+  EI+GQLW  +  
Sbjct: 90  GNSNAIETVFIPEKNRRTLCISSQAGCAVNCAFCATGHQGFNRNLSANEIVGQLWSAQRS 149

Query: 660 -----------LRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
                      L  +  IK    G   ITN+V MGMGEPLLNYK  I ++KL+L  +AYG
Sbjct: 150 INLNLITGIEDLNNKNTIK---SGNNLITNVVFMGMGEPLLNYKQVIKSIKLLLDVNAYG 206

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
            SRR + +STSGI+PMIDKLA++CPV LAVSLHA+N++LRNKLVPI+KKYPL ELI +C 
Sbjct: 207 FSRRKITVSTSGIVPMIDKLARDCPVSLAVSLHAANDDLRNKLVPINKKYPLNELIESCK 266

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RYIT SPR  ITFEYCML G+NDTD H  ELI+L+ + K    CKINLIPFN F +S+  
Sbjct: 267 RYITRSPRDFITFEYCMLSGVNDTDKHIKELINLVSQIK----CKINLIPFNSFESSDFR 322

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEMY 879
                +I  FA  L+NSGI  T+RK RG+DI+AACGQL+G   ++ K  M+
Sbjct: 323 APTIEKINSFANKLLNSGIMTTVRKTRGDDIHAACGQLAGNVKNVTKIAMH 373


>gi|304398581|ref|ZP_07380453.1| ribosome-associated GTPase EngA [Pantoea sp. aB]
 gi|304353792|gb|EFM18167.1| ribosome-associated GTPase EngA [Pantoea sp. aB]
          Length = 496

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/458 (43%), Positives = 290/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M +Q+  AI E+D+++F+VD R G++  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNIH 178
           ++ ++   ++ DFY LG+G  H I+A +G G+ + +E  L   LP+ +K    +      
Sbjct: 120 TDGMDPDQAIVDFYSLGLGEIHAIAASHGRGVSSLIEEAL---LPWMEKVEAVELTEEEE 176

Query: 179 SIEY---------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
           +  Y                           IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NQAYWAALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 296

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA   IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +
Sbjct: 297 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARIH 356

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  ESI   YD S   ++TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKYAH 416

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++K + + YKRYL  YF ++ +++
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLNVM 454


>gi|239815175|ref|YP_002944085.1| Cfr family radical SAM protein [Variovorax paradoxus S110]
 gi|239801752|gb|ACS18819.1| radical SAM enzyme, Cfr family [Variovorax paradoxus S110]
          Length = 382

 Score =  389 bits (1000), Expect = e-105,   Method: Composition-based stats.
 Identities = 184/339 (54%), Positives = 246/339 (72%), Gaps = 8/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF +MTDL+ SLR+KL  +  ++A  +++   S DGT 
Sbjct: 20  KLGEKRFRATQLFRWIHQRGASDFAQMTDLAKSLREKLATTARVEALPVITQHESKDGTI 79

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEI+ QL
Sbjct: 80  KWLFDVGDGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEIVAQL 139

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR  K++K   + +R I+N+VMMGMGEPL NY + + AL+ +L D+AYGLSRR 
Sbjct: 140 WFAEHFLR--KHLK---RDERVISNVVMMGMGEPLQNYTALVPALRTMLDDNAYGLSRRR 194

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+L  +CPV +AVSLHA N+ LR+ LVP+++KYP+ EL+ AC RY+ +
Sbjct: 195 VTVSTSGVVPMIDRLGADCPVAMAVSLHAPNDALRDDLVPLNRKYPIAELLEACKRYLVH 254

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA +L+ L+R + +  SCK NLIPFN FP S L+ S   
Sbjct: 255 APRDFITFEYCMLDGVNDQPEHARQLVELVRTHGV--SCKFNLIPFNPFPASGLLRSPQP 312

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           R+  FAK L  +G+  T+RK RG+DI+AACGQL+G+  D
Sbjct: 313 RVLAFAKALSEAGLVTTVRKTRGDDIDAACGQLAGDVKD 351


>gi|167623303|ref|YP_001673597.1| GTP-binding protein EngA [Shewanella halifaxensis HAW-EB4]
 gi|189037161|sp|B0TLI8.1|DER_SHEHH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|167353325|gb|ABZ75938.1| small GTP-binding protein [Shewanella halifaxensis HAW-EB4]
          Length = 490

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/454 (43%), Positives = 284/454 (62%), Gaps = 33/454 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI   M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  L    PY +            
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA---PYAEAMGIVKQEDGDD 176

Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
                         ++K   ++     IK+AI+GKPNVGKSTL N +LGE RV+ YD PG
Sbjct: 177 DEEEREFTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVYDEPG 232

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E   ++Y+LIDTAG+RRR+K  E +EKFSVIKTLK++ ++NVV+L++DA+
Sbjct: 233 TTRDSIYIPMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAR 292

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + I+ QD+ +  F+  +GR+L++ VNKWD I  N +  +K  + ++L F+ FA  +FISA
Sbjct: 293 EGIAEQDLGLLGFVLNAGRALVIAVNKWDGIDQNVKDRVKTELDRRLGFIDFARIHFISA 352

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG 
Sbjct: 353 LHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGY 412

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+V+HGN++K + + YKRY+  YF R+  +I
Sbjct: 413 NPPIVVVHGNQVKKLPDSYKRYMMNYFRRSLKVI 446


>gi|224826446|ref|ZP_03699548.1| radical SAM enzyme, Cfr family [Pseudogulbenkiania ferrooxidans
           2002]
 gi|347540922|ref|YP_004848347.1| radical SAM enzyme, Cfr family [Pseudogulbenkiania sp. NH8B]
 gi|224601547|gb|EEG07728.1| radical SAM enzyme, Cfr family [Pseudogulbenkiania ferrooxidans
           2002]
 gi|345644100|dbj|BAK77933.1| radical SAM enzyme, Cfr family [Pseudogulbenkiania sp. NH8B]
          Length = 364

 Score =  389 bits (1000), Expect = e-105,   Method: Composition-based stats.
 Identities = 181/343 (52%), Positives = 243/343 (70%), Gaps = 11/343 (3%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE PFRAKQ+ +W+H+ G +DF+ MTD++ SLR KL  S  ++ P +M +Q S DGTRK
Sbjct: 20  MGEKPFRAKQVMRWMHQMGEADFDAMTDIAKSLRCKLHESAEVRVPDLMVEQASSDGTRK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNL+  EIIGQLW
Sbjct: 80  WLLDVGTGNGVETVFIPEDDRGTLCISSQVGCALECTFCSTGRQGFNRNLSTAEIIGQLW 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
                    K + +  + +R I+N+VMMGMGEPL N+ + + AL+++L DH YGLSRR V
Sbjct: 140 WAN------KAMGVTPKNERVISNVVMMGMGEPLANFDNVVSALQIMLDDHGYGLSRRRV 193

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++P +D+L + CPV LAVSLHA N+ +R+ +VPI+KKYPL+EL+ AC RY+  +
Sbjct: 194 TVSTSGMVPQMDRLREACPVALAVSLHAPNDAIRDVIVPINKKYPLRELMAACQRYLEKA 253

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  +TFEY ML  +ND   HA +LI L++       CK NLIPFN FPNS    S N+ 
Sbjct: 254 PRDFVTFEYVMLDDVNDRPEHARQLIELVKD----VPCKFNLIPFNPFPNSGYERSSNNA 309

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
           I  F +IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 310 IHRFREILQEAGYVVTVRKTRGDDIDAACGQLAGQVQDKTRRK 352


>gi|90417497|ref|ZP_01225420.1| hypothetical protein GB2207_07462 [gamma proteobacterium HTCC2207]
 gi|90330738|gb|EAS46017.1| hypothetical protein GB2207_07462 [marine gamma proteobacterium
           HTCC2207]
          Length = 467

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/429 (45%), Positives = 286/429 (66%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVANY GLTRDR YG+G +  + F++IDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRLTRSRDALVANYSGLTRDRKYGDGEMHDRRFMVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M +Q+  A+ E+DI++FIVD R G++  D +I   LRK  + + LV NK
Sbjct: 61  SGE-EEGIDVGMAEQSLLAMDEADIVLFIVDCRSGIIAADHMIAETLRKKNRKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + ++ + +L DFY+LG       +A +G G+++ +E +L    PY ++ +     +   
Sbjct: 120 IDGLDPAAALADFYQLGFSGMFPTTATHGRGVRSMMEELLE---PYPEYAE----PDNSG 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           +  I++ +VG+PNVGKSTL+N LLGE+RV+ YD  GTTRDS+   +E + KKY LIDTAG
Sbjct: 173 LNGIRIGVVGRPNVGKSTLVNRLLGEDRVVVYDEAGTTRDSVYIDYERHGKKYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IR+R      IEKFS++KTL++I +ANVV+L++DA + +  QD+++   + ++GR L++ 
Sbjct: 233 IRKRKNIKLAIEKFSIVKTLQAIDDANVVVLMVDAHEGLVEQDLHLMGSVIDAGRGLVIG 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   +R+ IK +IK++L F  FA  ++ISA+    + +  +SI + Y ++   L
Sbjct: 293 VNKWDGLEPEKREKIKEDIKRRLRFAEFADVHYISAMHGTGVGNLYDSIENAYRAATDAL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S SR+T+ L  A++ H P      R KLR+AH GG+NPP+I++HGN+   +   Y RYLE
Sbjct: 353 SASRLTKVLEGAVEEHQPPLVHGRRIKLRFAHAGGRNPPVIIVHGNQTDSVPAQYTRYLE 412

Query: 420 KYFYRTFSL 428
           K F R   L
Sbjct: 413 KIFRRELGL 421


>gi|419954098|ref|ZP_14470239.1| GTP-binding protein Der [Pseudomonas stutzeri TS44]
 gi|387969187|gb|EIK53471.1| GTP-binding protein Der [Pseudomonas stutzeri TS44]
          Length = 494

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/446 (43%), Positives = 282/446 (63%), Gaps = 18/446 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R GL   D++I   LRK  +   LV NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFMVDSRAGLTAADQMIAEHLRKRNKRSFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------EL 163
            + ++  ++  +F  LG+G+   I+A +G GI + L+  L I                  
Sbjct: 120 VDTVDPDLARAEFSPLGLGDALPIAAAHGRGISHMLDAALGIFPKDNAEEGEAVEGEVAE 179

Query: 164 PYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKS 223
              +  + K        + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI  
Sbjct: 180 EVAQGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYI 239

Query: 224 LFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDI 283
            FE +++KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   D+
Sbjct: 240 PFERDDEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDL 299

Query: 284 NIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINS 343
           N+  F+ E+GR+L++ +NKWD +   ++  +K  ++++L F+ FA  +FISA     +  
Sbjct: 300 NLLGFVLETGRALVIALNKWDGMEQGEKDYVKTELERRLFFVDFADIHFISAKHGTGVGH 359

Query: 344 FMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIH 403
             +S+   + S++    TSR+T+ L  A++ H P      R KLRYAH GG NPP+IVIH
Sbjct: 360 LYKSVQASFTSAVTRWPTSRLTQILEDAVREHQPPMVAGRRIKLRYAHLGGANPPLIVIH 419

Query: 404 GNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GN++  +   Y RYLE  + R   L+
Sbjct: 420 GNQVDAVPKSYSRYLENTYRRVLKLV 445


>gi|254428914|ref|ZP_05042621.1| GTPase, putative [Alcanivorax sp. DG881]
 gi|196195083|gb|EDX90042.1| GTPase, putative [Alcanivorax sp. DG881]
          Length = 469

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/430 (43%), Positives = 283/430 (65%), Gaps = 3/430 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+G +G   + ++DTGG 
Sbjct: 1   MKPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGDGQLGGYLYTVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E   GI   MT Q+ QA+ E+D+++F+VDGR GL   D+ I + LRK  +P  L++NK
Sbjct: 61  G-ENDDGIDVPMTSQSLQAVGEADVVLFMVDGRAGLTAADEQIASELRKLPKPTYLIVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +++  ++ +F+ LG+     I+A +G G+ + +E+IL      +   + +  T+   
Sbjct: 120 TDGVDADSAMSEFFALGLTEVLPIAAAHGRGVTSMIEHILEGFTDLELLPEGEHRTSKKP 179

Query: 180 IE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            E  I+VA++G+PNVGKSTLIN +LGE RV+ +D  GTTRDSI+  FE   + Y LIDTA
Sbjct: 180 GEDSIRVAVLGRPNVGKSTLINRMLGEERVVVFDHAGTTRDSIEVPFERMGRAYTLIDTA 239

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR K FE++EKFSVIK L+++  A VV++++DA++ I+ QD+++  +  +SGR+L++
Sbjct: 240 GVRRRGKVFEMVEKFSVIKALQAMEAAQVVVVVIDAREGITDQDLHLLGYALDSGRALMI 299

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +  + ++ ++ N+ ++L F  +    FISA+    +      +   +DS+ I 
Sbjct: 300 AVNKWDGLEADHKERVRVNLGRRLEFAPWVKIKFISALHGTGVGDLWGMVEQAWDSAFIK 359

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           + T+ +TR +      HPP R    R KLRYAH GG NPP +V+HGNR + +   YK++L
Sbjct: 360 IGTNELTRMMEEITNGHPPPRNGRFRAKLRYAHLGGNNPPTLVLHGNRTEALPASYKKFL 419

Query: 419 EKYFYRTFSL 428
           E  F     L
Sbjct: 420 ENRFRELLKL 429


>gi|253988871|ref|YP_003040227.1| gtp-binding protein enga (double era-like domain protein)
           [Photorhabdus asymbiotica]
 gi|253780321|emb|CAQ83482.1| gtp-binding protein enga (double era-like domain protein)
           [Photorhabdus asymbiotica]
          Length = 499

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/458 (43%), Positives = 291/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FIIIDTGG 
Sbjct: 6   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGGI 65

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M  Q+  AI E+DI++F+VD R GL+  D  I   LR   +   LV NK
Sbjct: 66  DG-TEDGVETHMAAQSLMAIEEADIVLFMVDARAGLMPADHAIAKHLRSREKATFLVANK 124

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYK------------- 166
           ++ I+   S+ +FY LG+G+ + I+A +G G+   +E +L   LP+              
Sbjct: 125 TDGIDIDTSIAEFYSLGLGDIYSIAASHGRGVTQLIERVL---LPFSGKDEEEEVELTEE 181

Query: 167 ----KFFKKKEFTNIH-----------SIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
                ++ ++E                S   +K+AIVG+PNVGKSTL N +LGE RV+ Y
Sbjct: 182 QANAAYWAEQEQNESEMAEEEEDDFDPSTLPLKLAIVGRPNVGKSTLTNRILGEERVVVY 241

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L+
Sbjct: 242 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLV 301

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++ IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +
Sbjct: 302 IDAREGISDQDLSLLGFILNSGRSLVIAVNKWDGMSQEDKEQVKEMLDYRLGFVDFARVH 361

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  +SI   YD +   +STS +TR +  A ++H P   +  R K++YAH
Sbjct: 362 FISALHGSGVGNLFDSILEAYDCATRRVSTSLLTRIMRMAEEDHQPPMIRGRRVKMKYAH 421

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++  + + YKRYL  YF R+ +++
Sbjct: 422 AGGYNPPIVVIHGNQVTNLSDSYKRYLMNYFRRSLNVM 459


>gi|54307962|ref|YP_128982.1| GTP-binding protein EngA [Photobacterium profundum SS9]
 gi|81828838|sp|Q6LU45.1|DER_PHOPR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|46912388|emb|CAG19180.1| putative GTP-binding protein [Photobacterium profundum SS9]
          Length = 493

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/455 (43%), Positives = 293/455 (64%), Gaps = 30/455 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   + +  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR   +P  LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTVSDEAIAKHLRSRDKPTFLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE------ 173
            + I++ S   +F++LG+   + ++A +  G+   +E  L    P+ +  K  +      
Sbjct: 120 IDGIDADSACAEFWKLGVDAMYQVAAAHNRGVTALMERALA---PFAESLKGNDEEGLID 176

Query: 174 FTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
            +++  IE                    IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 177 LSSVEDIEKADLTEEDAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 236

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI    E + ++Y+LIDTAG+RRR    +V+EKFSVI+TLK++ +ANVV+L++DA
Sbjct: 237 GTTRDSIYIPMERDGQEYVLIDTAGVRRRKNMNQVVEKFSVIQTLKAVEDANVVLLIIDA 296

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++NIS QD+++  F+  SGRSL++ VNKWD + +  ++ +K+ + ++L F+ FA  +FIS
Sbjct: 297 RENISDQDLSLLGFVLNSGRSLVLAVNKWDGLDNEVKERVKSELDRRLGFIDFARIHFIS 356

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+    +    +S+   Y S+   +STS +TR +  A  +H P   +  R KL+YAH GG
Sbjct: 357 ALHGTGVGHLYDSVIEAYKSATKRISTSLLTRIMQMAQDDHQPPMVRGRRVKLKYAHAGG 416

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPIIVIHGN++  +   YKRYL  Y+ R+  ++
Sbjct: 417 YNPPIIVIHGNQVNDLPASYKRYLMNYYRRSLEMM 451


>gi|421505098|ref|ZP_15952038.1| GTP-binding protein Der [Pseudomonas mendocina DLHK]
 gi|400344321|gb|EJO92691.1| GTP-binding protein Der [Pseudomonas mendocina DLHK]
          Length = 492

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/444 (43%), Positives = 285/444 (64%), Gaps = 16/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+V +  GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R G+   D++I   LR+  +   LV+NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDARAGMTASDQMIGEHLRRRNKRSFLVVNK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI--------------ELPY 165
            +N++  ++  +F  +G+G P  I+  +G GI   LE +L I              E   
Sbjct: 120 VDNLDVDLARAEFSPMGLGEPLAIAGAHGRGITQMLEAVLGIFPKDAGEPEEGAEAEEEV 179

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
           ++  + K        + IK+AI+G+PNVGKSTL+N +LGE RVI +D  GTTRDSI   F
Sbjct: 180 QEGQEAKRIPGPSEKDGIKLAIIGRPNVGKSTLVNRMLGEERVIVFDQAGTTRDSIYIPF 239

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E +++KY LIDTAG+RRR K FE +EKFSV+KTL++I ++NVV+ ++DA++ +   D+N+
Sbjct: 240 ERDDEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDSNVVVFVMDAREGVVDHDLNL 299

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F+ ESGR+L++ +NKWD +   Q+  +K  ++++L F+ FA  +FISA+    +    
Sbjct: 300 LGFVLESGRALVIALNKWDGMDQGQKDYVKTELERRLFFVDFADIHFISALHGTGVGHLY 359

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+   + S++    TSR+T+ L  A+ +H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 360 KSVQAAFHSAVTRWPTSRLTQILEDAVSDHAPPLVNGRRIKLRYAHLGGANPPLIVIHGN 419

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           ++  +   Y RYLE  F R   L+
Sbjct: 420 QVDAVPRAYTRYLENTFRRVLKLV 443


>gi|394987688|ref|ZP_10380527.1| hypothetical protein SCD_00088 [Sulfuricella denitrificans skB26]
 gi|393792907|dbj|GAB70166.1| hypothetical protein SCD_00088 [Sulfuricella denitrificans skB26]
          Length = 359

 Score =  389 bits (999), Expect = e-105,   Method: Composition-based stats.
 Identities = 186/345 (53%), Positives = 245/345 (71%), Gaps = 11/345 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E GE PFRAKQL +W+H+FG SDF++M+DLS  LR+KL     ++ P ++ +QIS D TR
Sbjct: 19  ESGEKPFRAKQLLRWMHQFGESDFSRMSDLSKVLREKLGGLAIVEPPRLIQEQISDDSTR 78

Query: 595 KWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V     +ETVFIPE +R TLC+S+QVGCA+ C FCSTG+QGF RNL+V EIIGQL
Sbjct: 79  KWLLDVGAGQGVETVFIPEGDRGTLCVSSQVGCALECSFCSTGKQGFNRNLSVAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K +    + +R I+N+V+MGMGEPLLN+ + + AL+L+L D+AYGLSRR 
Sbjct: 139 WWAN------KALGCTPRNERVISNVVLMGMGEPLLNFDNMVTALRLMLDDNAYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSGI+P +D+L ++CPV LAVSLHA N+ LR+ LVPI+KKYPL EL+ AC RY+  
Sbjct: 193 VTVSTSGIVPAMDRLREQCPVALAVSLHAPNDALRDILVPINKKYPLSELMAACRRYVVD 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND+  HA EL++L R       CK NLIPFN FP+S    S   
Sbjct: 253 APRDFITFEYVMLEGVNDSPAHARELVALTRD----VPCKFNLIPFNPFPDSEYKRSSAD 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEM 878
            I+ F  IL+ +G  VT RK RG+DI+AACGQL+G+  D  ++ +
Sbjct: 309 VIRRFGAILIEAGRVVTTRKTRGDDIDAACGQLAGKVQDKTRRTI 353


>gi|392420167|ref|YP_006456771.1| GTP-binding protein Der [Pseudomonas stutzeri CCUG 29243]
 gi|390982355|gb|AFM32348.1| GTP-binding protein Der [Pseudomonas stutzeri CCUG 29243]
          Length = 492

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/445 (44%), Positives = 284/445 (63%), Gaps = 17/445 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QA+ E+D ++F+VD R G+   D++I   LRK  +   LV NK
Sbjct: 61  TGD-EEGIDAKMAEQSLQAMQEADAVMFMVDARAGMTPGDQMIAEHLRKMNKRHFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI---------------ELP 164
            ++I+  I+  +F  LG+G+   I+A +G GI + LE  L +                  
Sbjct: 120 VDSIDPDIARAEFSPLGLGDALPIAAAHGRGITHMLEQALGMFPKDNAEVAEAEGEEGET 179

Query: 165 YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
             +  + K        + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI   
Sbjct: 180 VAEGEELKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
           FE ++ KY LIDTAG+RRR K FE +EKFSV+KTL++I ++NVVI ++DA++ +   D+N
Sbjct: 240 FERDDAKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDSNVVIFVMDAREGVVEHDLN 299

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+ ESGR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA     + + 
Sbjct: 300 LLGFVLESGRALVIALNKWDGMEPSERDYVKTELERRLFFVEFADIHFISAKHGTGVGNL 359

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            +S+   + S++    TSR+T+ L  A++ H P      R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQASFTSAVTRWPTSRLTQILEDAVREHAPPMVASRRIKLRYAHLGGANPPLIVIHG 419

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  I   Y RYLE  + R   L+
Sbjct: 420 NQVDSIPKSYTRYLENTYRRVLKLV 444


>gi|418020639|ref|ZP_12659877.1| ribosome-associated GTPase EngA [Candidatus Regiella insecticola
           R5.15]
 gi|347604004|gb|EGY28732.1| ribosome-associated GTPase EngA [Candidatus Regiella insecticola
           R5.15]
          Length = 479

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/440 (45%), Positives = 284/440 (64%), Gaps = 24/440 (5%)

Query: 13  VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
           +GKSTLFN LT +R ALV+++PGLTRDR YG        FI+IDTGG +   ++G+   M
Sbjct: 1   MGKSTLFNHLTRTRSALVSDFPGLTRDRQYGRAEFESHEFIVIDTGGVDG-TEQGVETLM 59

Query: 73  TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL-D 131
             Q   AI E+DI++FIVDGR G++  D+ IT  LR   +   L++NK++ I+S  ++ D
Sbjct: 60  ASQALLAIEEADIVLFIVDGRAGMLPADQEITQHLRNRQKATFLLVNKTDGIDSDSAIAD 119

Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF----------------KKKEFT 175
           FY LG+G  + I+A +G G+   LE ++   +P K+                  +K + T
Sbjct: 120 FYSLGLGEVYAIAASHGRGVAQLLERVMAPFIPAKEPVVLTDEQLNAAYWATQEEKNDET 179

Query: 176 NIHSIEY------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
            +    +      IK+AIVG+PNVGKSTL N +LGE RVI YD PGTTRDSI      N 
Sbjct: 180 GLEEDNFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVIVYDLPGTTRDSIYIPMTRNE 239

Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
           ++YILIDTAG+R+R K  E +EKFSVIKTLK+I ++NVV+L++DAQ  IS QD+++  FI
Sbjct: 240 RQYILIDTAGVRKRGKVTETVEKFSVIKTLKAIEDSNVVLLVIDAQDGISDQDLSLLGFI 299

Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
             SGRSL++ +NKWD +    R+ +KN +  +LNF+ FA  +FISA++ + + +  +S+ 
Sbjct: 300 LNSGRSLVIVINKWDGMQAEDRQRVKNELDLRLNFIDFARIHFISALRGSGVGNLFKSVC 359

Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
             YDSS   ++TS +TR +  A + HPP R +  R KL+YAH GG NPPIIVIHGN++  
Sbjct: 360 EAYDSSTKRVNTSLLTRIMQMAEEEHPPARIQGRRVKLKYAHAGGYNPPIIVIHGNQVSS 419

Query: 410 IGNDYKRYLEKYFYRTFSLI 429
           + + YKRYL  YF R+  +I
Sbjct: 420 LTDAYKRYLMNYFRRSLKII 439



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 16/167 (9%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           L +VGRPNVGKSTL NR+      +V + PG TRD  Y      ++ +I+IDT G     
Sbjct: 195 LAIVGRPNVGKSTLTNRILGEERVIVYDLPGTTRDSIYIPMTRNERQYILIDTAGVR--- 251

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           K+G + E  +     +T +AI +S++++ ++D + G+ +QD  +  F+  SG+ +V+VIN
Sbjct: 252 KRGKVTETVEKFSVIKTLKAIEDSNVVLLVIDAQDGISDQDLSLLGFILNSGRSLVIVIN 311

Query: 120 K--------SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENI 158
           K         + + + + L    +     H ISAL G+G+ N  +++
Sbjct: 312 KWDGMQAEDRQRVKNELDLRLNFIDFARIHFISALRGSGVGNLFKSV 358


>gi|225024692|ref|ZP_03713884.1| hypothetical protein EIKCOROL_01574 [Eikenella corrodens ATCC
           23834]
 gi|224942581|gb|EEG23790.1| hypothetical protein EIKCOROL_01574 [Eikenella corrodens ATCC
           23834]
          Length = 363

 Score =  389 bits (999), Expect = e-105,   Method: Composition-based stats.
 Identities = 180/344 (52%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRA+Q+ +W+H+    DF++MTDL+ SLR KL  S  +  P +M+ Q S DGTR
Sbjct: 19  QMGEKPFRARQVMRWMHQGAAGDFDEMTDLAKSLRAKLNESAQVGVPALMAAQESRDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNL+  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPETDRGTLCISSQVGCALECTFCSTGRQGFNRNLSTAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K +    + +R I+N+VMMGMGEPL NY + + AL ++L DH Y LSRR 
Sbjct: 139 WWAN------KALGATPKDERVISNVVMMGMGEPLANYDNVVTALSIMLDDHGYALSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L ++ PV LAVSLHA N+ +RN++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLKEDMPVALAVSLHAPNDAIRNEIVPLNKKYPLKELMAACQRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEY ML G+ND   HA EL+ L++       CK NLIPFN FPNS    S + 
Sbjct: 253 APRDFVTFEYVMLDGVNDKPEHARELLELVKD----VPCKFNLIPFNPFPNSGYNRSSDE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G+ VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILYQAGLVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|260221248|emb|CBA29622.1| Ribosomal RNA large subunit methyltransferase N [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 466

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/352 (52%), Positives = 247/352 (70%), Gaps = 16/352 (4%)

Query: 522 ADFAESIDKNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAP 581
           A F ES        LGE  FRA QL +W+H+ G S F+ M+DL+ SLR KL+    ++A 
Sbjct: 14  AAFCES--------LGEKKFRATQLFRWVHQKGASQFDDMSDLAKSLRDKLRGHAEVRAL 65

Query: 582 HIMSDQISFDGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGF 640
            +++  IS DGT KW+F V   + +ETVFIPE +R TLCIS+Q GCA+ C FCSTG QGF
Sbjct: 66  PVITQHISADGTIKWLFDVGNGDAVETVFIPESDRGTLCISSQAGCAVGCRFCSTGHQGF 125

Query: 641 VRNLTVGEIIGQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKL 700
            RNL   EI+ QLW  E  LR    +       R I+N+VMMGMGEPL NY + + ALK+
Sbjct: 126 SRNLKTWEILAQLWFAEHFLRSHLGVS-----DRVISNVVMMGMGEPLQNYVALVPALKV 180

Query: 701 ILSDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPL 760
           +L DH YGLSRR V +STSG++PM+D+L ++CPV LAVSLHA  ++LR+ LVP+++KYPL
Sbjct: 181 MLDDHGYGLSRRRVTVSTSGVVPMMDRLGEDCPVALAVSLHAPEDSLRDNLVPLNRKYPL 240

Query: 761 KELILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFN 820
           KEL+ AC RY+ ++PR  ITFEYCML G+ND   HA  L+ L++++ +   CK NLIPFN
Sbjct: 241 KELMEACRRYLAHAPRDFITFEYCMLDGVNDHPEHAKLLLQLVKESGV--PCKFNLIPFN 298

Query: 821 CFPNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            FP S L+ S N+ ++ FA+IL++ G+  TIRK RG+DI+AACGQL+G+  D
Sbjct: 299 PFPASGLLRSSNNAVQAFARILVDGGLVTTIRKTRGDDIDAACGQLAGDVKD 350


>gi|429745119|ref|ZP_19278562.1| 23S rRNA methyltransferase [Neisseria sp. oral taxon 020 str.
           F0370]
 gi|429161326|gb|EKY03743.1| 23S rRNA methyltransferase [Neisseria sp. oral taxon 020 str.
           F0370]
          Length = 362

 Score =  389 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 184/344 (53%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRA+Q+ +W+H  G ++F +MTDL+ SLR KL+    I  P +M+ Q S DGTR
Sbjct: 19  EMGEKPFRARQVMRWMHWGGAANFTEMTDLAKSLRAKLEEKAQIGVPALMTSQESRDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESDRGTLCISSQVGCALECTFCSTGRQGFNRNLTTAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K +    + +R I+N+VMMGMGEPL NY++ + AL ++L DH YGLSRR 
Sbjct: 139 WWAN------KALGATPKDERVISNVVMMGMGEPLANYENVVRALSVMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L ++ PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLKEDMPVALAVSLHASNDAVRDQIVPLNKKYPLKELMGACRRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEY ML GIND   HA EL+ L+        CK NLIPFN FPNS    S   
Sbjct: 253 APRDFVTFEYVMLDGINDKVEHARELLKLVED----VPCKFNLIPFNPFPNSGYDRSSAE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVKDKTRRQ 352


>gi|372276908|ref|ZP_09512944.1| GTP-binding protein Der [Pantoea sp. SL1_M5]
 gi|390435951|ref|ZP_10224489.1| GTP-binding protein Der [Pantoea agglomerans IG1]
          Length = 496

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/458 (43%), Positives = 289/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M +Q+  AI E+D+++F+VD R G++  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNIH 178
           ++ ++   ++ DFY LG+G  H I+A +G G+ + +E  L   LP+  K    +      
Sbjct: 120 TDGMDPDQAVVDFYSLGLGEIHAIAASHGRGVSSLIEEAL---LPWMDKVETVELTEEEE 176

Query: 179 SIEY---------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
           +  Y                           IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NQAYWAALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 296

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA   IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +
Sbjct: 297 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDYRLGFIDFARIH 356

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  ESI   YD S   ++TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESITEAYDCSTKRVNTSLLTRIMNMAADDHQPPLVRSRRVKLKYAH 416

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++K + + YKRYL  YF ++ +++
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLNVM 454


>gi|440757329|ref|ZP_20936517.1| GTP-binding protein EngA [Pantoea agglomerans 299R]
 gi|436428888|gb|ELP26537.1| GTP-binding protein EngA [Pantoea agglomerans 299R]
          Length = 524

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/458 (43%), Positives = 290/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 29  MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 88

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M +Q+  AI E+D+++F+VD R G++  D+ I   LR   +   LV NK
Sbjct: 89  D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 147

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNIH 178
           ++ ++   ++ DFY LG+G  H I+A +G G+ + +E  L   LP+ +K    +      
Sbjct: 148 TDGMDPDQAIVDFYSLGLGEIHAIAASHGRGVSSLIEEAL---LPWMEKVEAVELTEEEE 204

Query: 179 SIEY---------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
           +  Y                           IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 205 NQAYWAALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 264

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L+
Sbjct: 265 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 324

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA   IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +
Sbjct: 325 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARIH 384

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  ESI   YD S   ++TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 385 FISALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKYAH 444

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++K + + YKRYL  YF ++ +++
Sbjct: 445 AGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLNVM 482


>gi|304311812|ref|YP_003811410.1| GTP-binding protein [gamma proteobacterium HdN1]
 gi|301797545|emb|CBL45765.1| GTP-binding protein [gamma proteobacterium HdN1]
          Length = 474

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/434 (45%), Positives = 281/434 (64%), Gaps = 17/434 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MK  + LVGRPNVGKSTLFNRLT +RDA+VA+ PGLTRDR YGE  +G  +F++IDTGG 
Sbjct: 1   MKAAVALVGRPNVGKSTLFNRLTKTRDAIVADMPGLTRDRKYGEARVGAHAFLVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M +Q+  AI E+D++ FIVD + GL   D+++   LR   +P+ +V+NK
Sbjct: 61  TGE-EEGIDSLMAEQSMLAIEEADLVFFIVDAKAGLTAGDEVLAQRLRVREKPLYVVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIE-----LPYKKFFKKKEF 174
            +  +S  +L +F  LG+G+P  ISA +G G+   ++++         LP        E 
Sbjct: 120 IDGQDSDEALAEFSRLGLGDPFFISASHGRGVTQMIDDVFGAVGEDAILPE----PTPED 175

Query: 175 TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYIL 234
           T       I++A+VG+PNVGKSTLIN +LGE RV+ +D PGTTRDSI   +E   +KY L
Sbjct: 176 TG------IRIAVVGRPNVGKSTLINRMLGEERVVVFDMPGTTRDSIYIPYERRGQKYTL 229

Query: 235 IDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR 294
           IDTAG+R+R +  E +EKFSVIKTL++I +A+VVIL+LDA++ I  QD+++  F+ E+GR
Sbjct: 230 IDTAGVRKRGRVDEAVEKFSVIKTLQAIEDAHVVILVLDAREGIVDQDLHLLGFVLETGR 289

Query: 295 SLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
           SL++ +NKWD +   Q+  +K  I +++ F+SFA  +FISA+    +     S+   Y S
Sbjct: 290 SLLIALNKWDGMDDYQKSRVKVEIDRRMEFVSFAKIHFISALHGTGVGDLYGSVERAYQS 349

Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
           +   LST  +TR L  AI ++ P      R KLRYAH GG NPP IVIHGN+   +   Y
Sbjct: 350 AFRRLSTPALTRILEDAIADYQPPLVGGRRIKLRYAHMGGVNPPRIVIHGNQTDSVPGSY 409

Query: 415 KRYLEKYFYRTFSL 428
           +RYLE  F+R   L
Sbjct: 410 RRYLENTFHRLMKL 423


>gi|268593180|ref|ZP_06127401.1| ribosome-associated GTPase EngA [Providencia rettgeri DSM 1131]
 gi|291311226|gb|EFE51679.1| ribosome-associated GTPase EngA [Providencia rettgeri DSM 1131]
          Length = 492

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/456 (43%), Positives = 289/456 (63%), Gaps = 31/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M  Q+ QAI E+DI++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETHMAAQSLQAIEEADIVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
           ++ I+ + ++ DFY LG+G  H I+A +G G+   +E  L    P+              
Sbjct: 120 TDGIDVTTAIGDFYSLGLGEIHPIAASHGRGVTQLIEQSLK---PFVAENEEEVELTEEE 176

Query: 166 --KKFFKKKEFTNIHSIEY----------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
               ++ + E       +           IK+AIVG+PNVGKSTL N +LGE RV+ +D 
Sbjct: 177 ENAAYWAELEAQGELDEDEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEERVVVFDM 236

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    E + ++YILIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMERDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVID 296

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++ IS QD+++  FI  +GRSL++ VNKWD +    R+ +K+ ++ +L F+ FA  +FI
Sbjct: 297 AREGISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFI 356

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+  + + +  ES+   Y+S+   + T+ +TR +  A   H P   +  R K++YAH G
Sbjct: 357 SALHGSGVGNLFESVQEAYESATRRVGTALLTRIMKMAEDEHQPPLIRGRRVKMKYAHAG 416

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPI+VIHGN++  + + YKRYL  YF R+  ++
Sbjct: 417 GHNPPIVVIHGNQVSDLPDSYKRYLMNYFRRSLQVM 452


>gi|438000044|ref|YP_007183777.1| 23S rRNA (adenine2503-C2)-methyltransferase [Candidatus
           Kinetoplastibacterium blastocrithidii (ex Strigomonas
           culicis)]
 gi|451812973|ref|YP_007449426.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium blastocrithidii TCC012E]
 gi|429339278|gb|AFZ83700.1| 23S rRNA (adenine2503-C2)-methyltransferase [Candidatus
           Kinetoplastibacterium blastocrithidii (ex Strigomonas
           culicis)]
 gi|451778942|gb|AGF49822.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium blastocrithidii TCC012E]
          Length = 378

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/343 (59%), Positives = 241/343 (70%), Gaps = 12/343 (3%)

Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHV 600
           FRA QLQ+WIHKF  + F+ MT++S  LR KLK    I+   + S+  S DGT KW+F V
Sbjct: 30  FRATQLQQWIHKFSANSFDVMTNISSKLRDKLKEISKIENMPVKSETFSKDGTVKWLFDV 89

Query: 601 -KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTE-- 657
              N IETVFIPEKNR TLCIS+Q GCA+NC FCSTG QGF RNL+  EII QLW  +  
Sbjct: 90  GNNNAIETVFIPEKNRRTLCISSQAGCAVNCAFCSTGHQGFNRNLSANEIISQLWSAQRS 149

Query: 658 --FKL-RREKNIKINSQGKRQ--ITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
             +KL   E  I  NS   R   ITNIV MGMGEPLLNY   + ++KL+L  +AYG SRR
Sbjct: 150 INYKLIGNESLINKNSIKDRGNLITNIVFMGMGEPLLNYSEVVQSIKLLLDVNAYGFSRR 209

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V +STSGI+PMIDKLA++CPV LAVSLHA+N+ LRNKLVPI+KKYP+KELI +C RYI 
Sbjct: 210 KVTVSTSGIVPMIDKLARDCPVSLAVSLHAANDVLRNKLVPINKKYPIKELIDSCKRYIL 269

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            SPR  ITFEYCML GINDTD H  ELISL++  K    CK+NLIPFN F NS       
Sbjct: 270 RSPRDFITFEYCMLSGINDTDNHLKELISLIKTIK----CKVNLIPFNSFINSEFKAPAI 325

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
            +I  FA  L+NSGI  T+RK RGNDI AACGQLSG   ++ K
Sbjct: 326 EKINSFANGLINSGIMTTVRKTRGNDIYAACGQLSGSIKNVTK 368


>gi|319794361|ref|YP_004156001.1| radical SAM protein [Variovorax paradoxus EPS]
 gi|315596824|gb|ADU37890.1| radical SAM enzyme, Cfr family [Variovorax paradoxus EPS]
          Length = 384

 Score =  389 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 183/339 (53%), Positives = 246/339 (72%), Gaps = 8/339 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF +MTDL+ SLR+KL  +  ++A  +++   S DGT 
Sbjct: 20  KLGEKRFRATQLFRWIHQRGASDFTQMTDLAKSLREKLATTARVEALPVLTQHESKDGTI 79

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +E VFIPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEI+ QL
Sbjct: 80  KWLFDVGDGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEIVAQL 139

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E  LR  K++K   + +R I+N+VMMGMGEPL NY + + AL+ +L D+AYGLSRR 
Sbjct: 140 WFAEHFLR--KHLK---RDERVISNVVMMGMGEPLQNYTALVPALRTMLDDNAYGLSRRR 194

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+L  +C V +AVSLHA N+ LR+ LVP+++KYP+ EL+ AC RY+ +
Sbjct: 195 VTVSTSGVVPMIDRLGTDCAVAMAVSLHAPNDALRDDLVPLNRKYPIAELLEACKRYLEH 254

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEYCML G+ND   HA +L+ L+RK+ +  SCK NLIPFN FP S L+ S   
Sbjct: 255 APRDFITFEYCMLDGVNDQPEHARQLVELVRKHDV--SCKFNLIPFNPFPASGLLRSPQP 312

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           R+  FA+ L  +G+  T+RK RG+DI+AACGQL+G+  D
Sbjct: 313 RVLAFARTLSEAGLVTTVRKTRGDDIDAACGQLAGDVKD 351


>gi|333892275|ref|YP_004466150.1| GTP-binding protein Der [Alteromonas sp. SN2]
 gi|332992293|gb|AEF02348.1| GTP-binding protein Der [Alteromonas sp. SN2]
          Length = 481

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/445 (43%), Positives = 292/445 (65%), Gaps = 21/445 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+    ++ FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEQRQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  EM +Q+  AI E+D+++ +VD R GL+  D+ I + +R+  + + +V NK
Sbjct: 61  TGD-EEGIDAEMAQQSLLAIEEADVVLLLVDARAGLLPADQGIADHIRRLNKKVFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I+  S S DFY LG+G    I+A +G G+   L++ L   +P +  F          
Sbjct: 120 VDGIDGDSESADFYALGLGTVKQIAAAHGRGVSQLLQDAL---VPLEASFPDMRIVEEVQ 176

Query: 170 -----KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
                 +++   +   + IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+   
Sbjct: 177 EEEIDAEEQLKRLQE-QPIKLAIVGKPNVGKSTLTNRILGEERVVVFDLPGTTRDSVFIP 235

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
            E + ++YILIDTAG+R+R K  E +EKFS++KTL++I EANVV++++DA++ I+ QD++
Sbjct: 236 MERDEREYILIDTAGVRKRRKVNEAVEKFSIVKTLQAIDEANVVLMIIDAREGITDQDLS 295

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+  SGRSL++ VNKWD +  + +  IK  + ++L F+ FA  +FISA+    + + 
Sbjct: 296 LLGFVLNSGRSLVIAVNKWDGLSTDIKNDIKRELDRRLGFIDFARLHFISAMHGTGVGNL 355

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            ES+   Y S+   ++TS +T+ +  A  +H P   +  R K++YAH GG NPP+IVIHG
Sbjct: 356 FESVQEAYLSATKRINTSMLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHG 415

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  +   YKR+L  YF +   ++
Sbjct: 416 NQVDDLPTSYKRFLMNYFRKALQVM 440


>gi|82703494|ref|YP_413060.1| hypothetical protein Nmul_A2379 [Nitrosospira multiformis ATCC
           25196]
 gi|123768149|sp|Q2Y6F3.1|RLMN_NITMU RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|82411559|gb|ABB75668.1| 23S rRNA m(2)A-2503 methyltransferase [Nitrosospira multiformis
           ATCC 25196]
          Length = 365

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/343 (53%), Positives = 245/343 (71%), Gaps = 7/343 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRA+QL +WIH+ G +DF+ M+DL+  LR+KL  +  I+ P ++SD  + DGTR
Sbjct: 19  EIGEKPFRARQLLRWIHRTGEADFDAMSDLAKGLREKLAAAAVIEPPKVISDHTASDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N IETV+IPE +R TLCIS+QVGCA+ C FCSTGRQGF RNLTV EIIGQL
Sbjct: 79  KWLLSVGAGNGIETVYIPETSRGTLCISSQVGCALACAFCSTGRQGFNRNLTVAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W     L   +     +  +R ITNIVMMGMGEPL N+++ + +L L+L D+AYGLSRR 
Sbjct: 139 WWANKAL--TETFTSEAGRERPITNIVMMGMGEPLTNFENVVTSLDLMLDDNAYGLSRRR 196

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSGIIP +D+L + CPV LAVSLHA N+ LR++LVPI++KYP++EL+ AC RY+  
Sbjct: 197 VTVSTSGIIPAMDRLRERCPVALAVSLHAPNDALRDQLVPINRKYPIRELLGACERYLQS 256

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND+   A EL+ L+R       CK+NLIPFN FP+S    S  +
Sbjct: 257 APRDFITFEYVMLDGVNDSVAQARELVQLVRD----IPCKLNLIPFNPFPDSGFRRSSAN 312

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
            +  F  +LM +G+  T+RK RG+DI AACGQL+G+  D  ++
Sbjct: 313 AVSRFRDVLMEAGLVTTVRKTRGDDIAAACGQLAGKVLDKTRR 355


>gi|410637367|ref|ZP_11347947.1| GTP-binding protein [Glaciecola lipolytica E3]
 gi|410142990|dbj|GAC15152.1| GTP-binding protein [Glaciecola lipolytica E3]
          Length = 480

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/443 (44%), Positives = 288/443 (65%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTNSRDALVA+YPGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNSRDALVADYPGLTRDRKYGQAKYEGLQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  EM +Q+  AI E+ +++F+VD R GL   D  I N LRK  + + +V NK
Sbjct: 61  SGD-EQGIDAEMAEQSLLAIDEAHVVLFLVDARAGLTPADIGIANHLRKQEKTVYVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFF--------- 169
            + I+  S + +FY LG+G    ++A +G G+   LE  L  +E  Y             
Sbjct: 120 VDGIDGDSETAEFYSLGLGEISQVAAAHGRGVTQLLEKSLKPLEKSYPDMHIPEVVRNDD 179

Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
               + E   + S+  IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDSI    E
Sbjct: 180 GENAEAELQRLQSLP-IKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSIFIPME 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            ++++YILIDTAG+R+R K  + +EKFS+IKTL++I EANVV+L +DA++ I+ QD+++ 
Sbjct: 239 RDDREYILIDTAGVRKRKKVSDAVEKFSIIKTLQAIEEANVVLLCIDAREGIADQDLSLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F+  +GRSL++ VNKWD +  + +  IK  + ++L F+ FA  +FISA+    +    E
Sbjct: 299 GFVLNAGRSLVIAVNKWDGLSKDIKDDIKRELDRRLGFVDFARIHFISALHGTGVGHLFE 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+   Y S+   ++TS +TR +  A ++H P   +  R K++YAH GG NPP+I+IHGN+
Sbjct: 359 SVQEAYASATKRINTSMLTRIMEMAQEDHQPPMVRGRRVKMKYAHAGGYNPPVIIIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ + + YKRY+  Y+ ++   +
Sbjct: 419 VEDLPDAYKRYMMNYYRKSLQTM 441


>gi|74316613|ref|YP_314353.1| histidyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123745548|sp|Q3SL69.1|SYH_THIDA RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|74056108|gb|AAZ96548.1| Histidyl-tRNA synthetase, class IIa [Thiobacillus denitrificans ATCC
            25259]
          Length = 419

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/355 (51%), Positives = 252/355 (70%), Gaps = 8/355 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F+DELNG++L+LRPEGTAS +R+VI++NL+YDG KRLWYSGPMFRHE
Sbjct: 57   GEVTDIVEKEMYTFVDELNGESLTLRPEGTASSVRAVIQHNLLYDGGKRLWYSGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD+DAELI+MC+ LW+ L +    L+LN++G+   R++
Sbjct: 117  RPQKGRYRQFHQVGVEALGFAGPDVDAELIVMCADLWRELGIAP-TLQLNTLGDHGARQR 175

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y + H+D      D +  L+ N LR+LDSKN  ++ +   AP+LLD LE ++L
Sbjct: 176  HRSKLIAYYEAHRDV--LDADAQRRLHSNPLRILDSKNPAMQALNAEAPRLLDELEDEAL 233

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
            +HF  +Q +L  N I+++IN +LVRG+DYYNRTVFEW TD+LG+Q ++C GGRYD L+++
Sbjct: 234  NHFDALQGLLRANGIAFEINPRLVRGLDYYNRTVFEWVTDQLGAQGTVCAGGRYDGLVEQ 293

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA+GFA+GIERL+ L++            D YIVH G  A+  A+  +  LR  
Sbjct: 294  LGGKPAPAAGFAMGIERLLALVETSG-KPIVPAVPDAYIVHAGDTADAFAWQAAATLRGA 352

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE 1222
            GL V+L+C       SFKSQMK+A+AS A +A IIG+ E     + +K LR   E
Sbjct: 353  GLAVVLHCGGG----SFKSQMKKADASRARYAVIIGDEEAAAQQVSVKPLRGTAE 403


>gi|269103271|ref|ZP_06155968.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163169|gb|EEZ41665.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 499

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/458 (43%), Positives = 286/458 (62%), Gaps = 30/458 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I +  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEINEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR   +P  LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLMAIEEADVVLFLVDGRAGLTAADEAIAKHLRSRNKPTFLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL---------------TIELP 164
            + I++ S   DF++LG    H I+A    G+   +E  L               + E+ 
Sbjct: 120 IDGIDADSACADFWKLGADEMHQIAASQNRGVTALMERALEPFFENISGSDEELESDEIS 179

Query: 165 YKKFFKKKEFTNIHSIEY-------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
            +      E  N +  E              IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 IEDLNSVAEIENANLSEQDAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVY 239

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAGIRRR    E +EKFSVI+TLK++ +ANVV+L+
Sbjct: 240 DMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHEAVEKFSVIQTLKAVEDANVVLLI 299

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA++NIS QD+++  F   +GRSL++ VNKWD + ++ ++ +K  + ++L F+ FA  +
Sbjct: 300 IDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNDVKERVKTELDRRLGFVDFARIH 359

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+    +    ES+   Y S+   +STS +TR +  A  +H P   +  R KL+YAH
Sbjct: 360 FISALHGTGVGHLYESVVEAYQSATKRISTSMLTRIMQMAQDDHQPPMIRGRRVKLKYAH 419

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPIIV+HGN +  +   YKRYL  Y+ ++  ++
Sbjct: 420 AGGYNPPIIVVHGNLVNELPGSYKRYLMNYYRKSLEMM 457


>gi|319943743|ref|ZP_08018024.1| cfr family radical SAM enzyme [Lautropia mirabilis ATCC 51599]
 gi|319742976|gb|EFV95382.1| cfr family radical SAM enzyme [Lautropia mirabilis ATCC 51599]
          Length = 460

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 181/356 (50%), Positives = 248/356 (69%), Gaps = 20/356 (5%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE PFRA QL +W+H+ GV+D++ MTDL+ S R++L++   I+AP ++ D  + D TRK
Sbjct: 81  MGEKPFRAHQLMRWVHQRGVADWSAMTDLARSFRERLQDKALIQAPSVLKDHTAPDATRK 140

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +E VFIPE  R TLC+S+Q GCA+NC FCSTG+QGF RNL   EI+GQ+W
Sbjct: 141 WLFDVGAGNAVEAVFIPEARRGTLCVSSQAGCAVNCSFCSTGKQGFSRNLNTAEILGQIW 200

Query: 655 VTEFKLRR--------------EKNIKINSQGK-RQITNIVMMGMGEPLLNYKSTIGALK 699
           +    LR+              + +  ++  G  R I+NIV MGMGEPLLNY + + AL+
Sbjct: 201 LANQLLRQPGAQPRWGGADDMAQLDEDVDDAGALRPISNIVFMGMGEPLLNYNALLPALR 260

Query: 700 LILSDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYP 759
            +L DH YGLSRR V +STSG++P+ID+L+++CPV LAVSLHASN+ LR++LVP+++KYP
Sbjct: 261 ALLDDHGYGLSRRRVTVSTSGVVPLIDRLSEDCPVALAVSLHASNDTLRDQLVPLNRKYP 320

Query: 760 LKELILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPF 819
           LKEL+ AC RY+  +PR  ITFEY ML  IND+  HA EL +L+        CK NLIPF
Sbjct: 321 LKELLAACQRYLKVAPRDFITFEYVMLKDINDSVAHARELAALVAD----VPCKFNLIPF 376

Query: 820 NCFPNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
           N FPNS L  S +  I+ F  +L+ +GI  T+R+ RG++I+AACGQL+GE  D  +
Sbjct: 377 NPFPNSGLSRSSDRTIRQFGDVLLRAGIVTTVRRTRGDEIDAACGQLAGEVVDRTR 432


>gi|409394988|ref|ZP_11246114.1| GTP-binding protein Der [Pseudomonas sp. Chol1]
 gi|409395953|ref|ZP_11246978.1| GTP-binding protein Der [Pseudomonas sp. Chol1]
 gi|409119452|gb|EKM95835.1| GTP-binding protein Der [Pseudomonas sp. Chol1]
 gi|409120357|gb|EKM96706.1| GTP-binding protein Der [Pseudomonas sp. Chol1]
          Length = 494

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/447 (43%), Positives = 281/447 (62%), Gaps = 20/447 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R GL   D++I   LRK  +   LV NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFMVDSRAGLTAADQMIAEHLRKRNKRSFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + ++  ++  +F  LG+G+   I+A +G GI + L+  L I  P               
Sbjct: 120 VDTVDPDLARAEFSPLGLGDALPIAAAHGRGISHMLDAALGI-FPKDNAEEGEAVEGEVA 178

Query: 170 -------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
                  + K        + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI 
Sbjct: 179 EEVAEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIY 238

Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
             FE + +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   D
Sbjct: 239 IPFERDGEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHD 298

Query: 283 INIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNIN 342
           +N+  F+ E+GR+L++ +NKWD +   ++  +K  ++++L F+ FA  +FISA     + 
Sbjct: 299 LNLLGFVLETGRALVIALNKWDGMEPGEKDYVKTELERRLFFVDFADIHFISAKHGTGVG 358

Query: 343 SFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVI 402
              +S+   + S++    TSR+T+ L  A++ H P      R KLRYAH GG NPP+IVI
Sbjct: 359 HLYKSVQASFTSAVTRWPTSRLTQILEDAVREHQPPMAAGRRIKLRYAHLGGANPPLIVI 418

Query: 403 HGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           HGN++  +   Y RYLE  + R   L+
Sbjct: 419 HGNQVDAVPKSYSRYLENTYRRVLKLV 445


>gi|381403687|ref|ZP_09928371.1| GTP-binding protein Der [Pantoea sp. Sc1]
 gi|380736886|gb|EIB97949.1| GTP-binding protein Der [Pantoea sp. Sc1]
          Length = 496

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/458 (43%), Positives = 289/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M +Q+  AI E+D+++F+VD R G++  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   + +DFY LG+G  H I+A +G G+ + +E  L   LP+ +  +  E T    
Sbjct: 120 TDGLDPDQAVIDFYSLGLGEIHAIAASHGRGVTSLIETAL---LPWMETVEPVELTEEEE 176

Query: 180 IEY----------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
            +                             IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NQAYWAALDAEEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + + Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGRDYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 296

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA   IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +
Sbjct: 297 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARIH 356

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  ESI   YD S   ++TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKYAH 416

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++K + + YKRYL  YF ++ +++
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLNVM 454


>gi|116051824|ref|YP_789333.1| GTP-binding protein EngA [Pseudomonas aeruginosa UCBPP-PA14]
 gi|421172949|ref|ZP_15630704.1| GTP-binding protein EngA [Pseudomonas aeruginosa CI27]
 gi|122260971|sp|Q02RV3.1|DER_PSEAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|115587045|gb|ABJ13060.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|404536620|gb|EKA46256.1| GTP-binding protein EngA [Pseudomonas aeruginosa CI27]
          Length = 493

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/445 (44%), Positives = 286/445 (64%), Gaps = 17/445 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M +Q+ QAI E+D ++F+VD R G+   D++I   LRK  +   L+ NK
Sbjct: 61  SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLIANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
            + I+  ++  +F  LG+G+   I+A +G GI + L+  L I            E   ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNAEEEGEGEPASEE 179

Query: 168 FFKKKEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
             + +E T I      + IK+AI+G+PNVGKSTL+N +LGE RVI YD  GTTRDSI   
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239

Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
           FE N + Y LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +   D+N
Sbjct: 240 FERNEEMYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299

Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
           +  F+ E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +   
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359

Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
            +S+   + S++    TSR+T  L  A++ H P      R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419

Query: 405 NRLKYIGNDYKRYLEKYFYRTFSLI 429
           N++  +   Y RYLEK + R   L+
Sbjct: 420 NQVDAVPKAYTRYLEKTYRRVLKLV 444


>gi|338997175|ref|ZP_08635877.1| GTP-binding protein EngA [Halomonas sp. TD01]
 gi|338765940|gb|EGP20870.1| GTP-binding protein EngA [Halomonas sp. TD01]
          Length = 467

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/429 (43%), Positives = 279/429 (65%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K++ +IDTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGGKAYTVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AI E+DI++F+VD R GL   D+ I N LR + +   LV+NK
Sbjct: 61  SGD-EEGIDAAMAEQSLAAIDEADIVLFLVDARAGLNVADEAIANHLRVNQKKTWLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +   S   DF+ LG+G+P  I+A +G  +   ++ +L    P+ +  +         
Sbjct: 120 TDGLEEHSAMADFWTLGLGDPWPIAAAHGRNVSLLIDTVLE---PFPE--RDPSIPGDTG 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I++ ++G+PNVGKSTL+N LLGE RV+ +D  GTTRD+I+  FE   K Y+LIDTAG
Sbjct: 175 TKGIRIGVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERRGKPYVLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR    E+ EKFS+IKTL +I E +V +++LDA+  +  QD+++ +++  SGR+L++ 
Sbjct: 235 IRRRKNVSEIAEKFSIIKTLDAIKECHVAVMVLDARSGLVEQDLHLLDYVLTSGRALVLA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + ++ ++  IK++L F  +A  +FISA+    +     SI   +D++  H 
Sbjct: 295 INKWDGLESDAKEKMRAEIKRRLGFAEYAEMHFISALHGTAVGDLYPSIERAFDAANAHW 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+T  L  A+  HPP      R KLR AHQGG NPPIIV+HGN+ + +   Y+RYL 
Sbjct: 355 STNRLTTLLQDAVSQHPPPMVNGRRIKLRMAHQGGSNPPIIVVHGNQTESLPEAYRRYLT 414

Query: 420 KYFYRTFSL 428
             F +   +
Sbjct: 415 NTFRKVLKV 423


>gi|352106574|ref|ZP_08961517.1| GTP-binding protein EngA [Halomonas sp. HAL1]
 gi|350597617|gb|EHA13745.1| GTP-binding protein EngA [Halomonas sp. HAL1]
          Length = 467

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/425 (43%), Positives = 280/425 (65%), Gaps = 7/425 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K + +IDTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGDKVYTVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AI E+DI++F+VD R GL+  D+ I N LR + +   LV+NK
Sbjct: 61  SGD-EEGIDAAMAEQSLAAIDEADIVLFMVDARAGLIAADQAIANHLRVNQKKTWLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +    ++ DF+ LG+G+P  I+A +G  +   ++ +L    P+ +  +         
Sbjct: 120 TDGLEEHSAMGDFWSLGLGDPWPIAAAHGRNVSTLMDVVLE---PFPE--RDASIPADTG 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + +++ ++G+PNVGKSTL+N LLGE+RV+ +D  GTTRD+I+  FE   K Y+LIDTAG
Sbjct: 175 SKGVRIGVIGRPNVGKSTLVNRLLGEDRVVVFDEAGTTRDAIEIPFERRGKPYVLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR    E+ EKFS+IKTL +I E++VVI++LD    +  QD+++ +++  +GR+L++ 
Sbjct: 235 IRRRKNVSEIAEKFSIIKTLDAIKESHVVIMVLDGSSGLVEQDLHLLDYVLTTGRALVLA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    +  ++  +K++L F  +A  +FISA+    +     SI+  +D++  H 
Sbjct: 295 VNKWDGLESEAKDKMRAEVKRRLGFADYAELHFISALHGTAVGDLYPSIDRAFDAANAHW 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+T  L  A+  +PP   +  R KLR AHQGG NPPIIV+HGN+ + +   Y+RYL 
Sbjct: 355 STNRLTTLLQDAVSQNPPPMVQGRRIKLRMAHQGGSNPPIIVVHGNQTESLPEAYRRYLT 414

Query: 420 KYFYR 424
             F +
Sbjct: 415 NTFRK 419


>gi|406941778|gb|EKD74178.1| GTP-binding protein engA [uncultured bacterium]
          Length = 461

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/430 (45%), Positives = 287/430 (66%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ +VGRPNVGKSTLFN LT  R ALV+  PG+TRDR YGE  I  + FIIIDTGG 
Sbjct: 1   MLPVIAIVGRPNVGKSTLFNCLTRRRAALVSPMPGMTRDRQYGEADIADRRFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E K  +   M +Q++QAI+E+D IIF+VDGR  L   D+ I   LR   + I LV+NK
Sbjct: 61  SHE-KNNLDRLMAEQSEQAILEADKIIFLVDGRTELTAADRSIVKKLRALNKNIFLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++S++++ DF++LG+G P+ ISA +G GI+  ++ +L    P ++   +KE     +
Sbjct: 120 TEGLDSNVAIADFFQLGLGTPYPISAAHGKGIEELVQTLL----PIQEIGNEKE----PN 171

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+AI+G+PNVGKSTLIN +LGE+RVI +D PGTTRDSI       NK+Y LIDTAG
Sbjct: 172 ATGIKLAIIGRPNVGKSTLINRMLGEDRVIVFDEPGTTRDSIFIPLTRFNKEYTLIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE  EKFSV+KTL++I   +VVI ++DA++ ++ QD+ +  FI ESGR+L++ 
Sbjct: 232 VRQRGKIFETTEKFSVVKTLQAIETTHVVIFVIDAREGVTEQDLRLLGFILESGRALVIA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   ++   +  I ++L+F+ F   +FISA+  + + +  +S++  Y S+   L
Sbjct: 292 INKWDGMTLEEKDKTRATIDRRLHFVPFVRIHFISALHGSGVGNLFDSVDEAYVSANKKL 351

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++T+ L  A+  H P   +  R KLRYAH GG NPP+I+IHGN++K +   Y+RYL 
Sbjct: 352 STPKLTQILEEAVTQHAPPLVQGRRIKLRYAHSGGNNPPLIIIHGNQVKALPEAYRRYLA 411

Query: 420 KYFYRTFSLI 429
             +     L+
Sbjct: 412 NTYQARLKLM 421


>gi|374620259|ref|ZP_09692793.1| ribosome-associated GTPase EngA [gamma proteobacterium HIMB55]
 gi|374303486|gb|EHQ57670.1| ribosome-associated GTPase EngA [gamma proteobacterium HIMB55]
          Length = 473

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/429 (46%), Positives = 281/429 (65%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN+LT +RDALVA+Y GLTRDR YGEG +G++ F++IDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNQLTKTRDALVADYSGLTRDRKYGEGKLGEQRFMVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E ++GI   M  Q+  AI E+D+++ +VDGR GL   D+ +   LR+  +P  LV+NK
Sbjct: 61  TGE-EQGIDAAMAAQSLAAIDEADVVLLMVDGRAGLQVGDQTLVRLLRERNKPFELVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +   ++  DF+ LGIG  H I+A +  G+++ +  +L       + F  +    I  
Sbjct: 120 IDGVGEDVAASDFHSLGIGALHTIAATHNRGVRSMITEVL-------EPFDSESQPPIEL 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I+VAIVG+PNVGKSTL+N LLGE RV+ +D PGTTRDS+   FE +   Y LIDTAG
Sbjct: 173 DSGIRVAIVGRPNVGKSTLVNRLLGEERVVVFDQPGTTRDSVFIEFERHGHAYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E +EKFS++KTLK+I +ANVVILL+DA++ +  QD+++     E+GR L+V 
Sbjct: 233 VRRRKNVKETVEKFSIVKTLKAIDQANVVILLMDAREGVVEQDLHLLGQCIEAGRGLVVA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  ++R+ +K  ++++L F+ +A  +FISA+    +    ESI+  Y+S+   L
Sbjct: 293 LNKWDGMDADERERVKVELQRRLLFVDYADIHFISALHGTGVGHLYESIHGAYESATRKL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T R+T+ L   I +HPP      R KLRYAH GG NPP IVIHGN  + +   Y RYLE
Sbjct: 353 TTPRLTKLLEDIIASHPPPMVSGRRVKLRYAHMGGHNPPRIVIHGNSTENLPQSYVRYLE 412

Query: 420 KYFYRTFSL 428
             F R   L
Sbjct: 413 NSFRRELDL 421


>gi|124267188|ref|YP_001021192.1| hypothetical protein Mpe_A1999 [Methylibium petroleiphilum PM1]
 gi|205829632|sp|A2SHB8.1|RLMN_METPP RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|124259963|gb|ABM94957.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 394

 Score =  388 bits (996), Expect = e-104,   Method: Composition-based stats.
 Identities = 181/341 (53%), Positives = 245/341 (71%), Gaps = 8/341 (2%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G SDF +M+DL+ SLR+KL     ++   ++S+ +S DGT 
Sbjct: 20  QLGEKRFRATQLFRWIHQKGQSDFAQMSDLAKSLREKLAGRAVVRPLAVLSEHVSADGTV 79

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +ETVFIPE +R TLCIS+Q GCA+ C FCSTG QGF RNL+ GEI+ QL
Sbjct: 80  KWLFDVGGGNAVETVFIPENDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLSTGEIVAQL 139

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W  E +LR           +R I+N+VMMGMGEPL NY + + AL+++L DH YGLSRR 
Sbjct: 140 WHAEHQLRARLGTT-----ERVISNVVMMGMGEPLQNYAALLPALRVMLDDHGYGLSRRR 194

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++PMID+L ++CPV LAVSLHA  + LR+ LVP+++KYP+ EL+ AC RY+  
Sbjct: 195 VTVSTSGVVPMIDRLREDCPVALAVSLHAPTDALRDDLVPLNRKYPIAELLEACQRYLEA 254

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL--TSCKINLIPFNCFPNSNLICSK 831
           +PR  ITFEYCML G+ND++  A EL+ L+ +   +    CKINLIPFN FP S L  S 
Sbjct: 255 APRDFITFEYCMLDGVNDSEAQARELLRLVGERGPVGRVPCKINLIPFNPFPASGLTRSS 314

Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            +R++ FA++L++ G+  T+R+ RG+DI+AACGQL+GE  D
Sbjct: 315 VARVQAFAQLLVDGGLVTTVRRTRGDDIDAACGQLAGEVQD 355


>gi|332530539|ref|ZP_08406478.1| radical sam enzyme, cfr family protein [Hylemonella gracilis ATCC
           19624]
 gi|332040014|gb|EGI76401.1| radical sam enzyme, cfr family protein [Hylemonella gracilis ATCC
           19624]
          Length = 404

 Score =  388 bits (996), Expect = e-104,   Method: Composition-based stats.
 Identities = 181/346 (52%), Positives = 247/346 (71%), Gaps = 9/346 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF++M+DL+ SLR KLK + +I+   +++ Q S DGT K
Sbjct: 21  LGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLRAKLKTAAHIQGLPVITQQESADGTIK 80

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +E V+IPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEI+ QLW
Sbjct: 81  WLFDVGDGNAVEAVYIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEIVAQLW 140

Query: 655 VTEFKLRREKNIKIN-SQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
             E  LR  +   +   +  R ITN+VMMGMGEPL NY + + AL+++L DH YGLSRR 
Sbjct: 141 HAEHFLRARRQHPLQPGEDHRVITNVVMMGMGEPLQNYAALVPALRVMLDDHGYGLSRRR 200

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           + +STSG++PM+++L+++CPV LAVSLHA N+ LR+ LVP+++KYP+ EL+  C  Y+ +
Sbjct: 201 LTVSTSGVVPMMERLSEDCPVALAVSLHAPNDGLRDGLVPLNRKYPIHELLDTCLSYLAH 260

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTS-------CKINLIPFNCFPNSN 826
           +PR  ITFEYCML G+ND   HA EL++LM+  +   +       CK+NLIPFN FP S 
Sbjct: 261 APRDFITFEYCMLDGVNDQPEHARELLALMQVFRQRAADLGHGVGCKLNLIPFNPFPESG 320

Query: 827 LICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           L  S   R++ FAKIL+ +GI  T+RK RG+DI+AACGQL+G+  D
Sbjct: 321 LKRSPGERVQAFAKILLEAGIVTTVRKTRGDDIDAACGQLAGDVQD 366


>gi|334143339|ref|YP_004536495.1| GTP-binding protein engA [Thioalkalimicrobium cyclicum ALM1]
 gi|333964250|gb|AEG31016.1| GTP-binding protein engA [Thioalkalimicrobium cyclicum ALM1]
          Length = 475

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/426 (44%), Positives = 279/426 (65%), Gaps = 6/426 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           KP++ LVGRPNVGKSTLFNRLT +RDA+VA++PGLTRDR YG G +G   +I++DTGG  
Sbjct: 3   KPIVALVGRPNVGKSTLFNRLTKTRDAIVADFPGLTRDRQYGTGKVGSYDYIVVDTGGLS 62

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
            E   G+   M  Q +QA+ ES  I F+VDGR G+   D+ I  ++R  G+P+ +++NK+
Sbjct: 63  GE-DLGVDTLMASQVQQALAESHGIFFLVDGRAGITPADEAIAIYIRGFGKPVQVLVNKT 121

Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
           E  N ++ + DFY LG+G+P  +S+ +G+ +   +++++   LP   F +  E      I
Sbjct: 122 EGCNLAVLTADFYALGLGDPIGVSSAHGDNVAEAVDDLID-RLPTDIFAQDYELDEHPGI 180

Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
              +VA++G+PNVGKSTLIN +LGE+RV+ +D PGTTRDSI   FE + + Y LIDTAG+
Sbjct: 181 ---RVAVIGRPNVGKSTLINRMLGEDRVVAFDMPGTTRDSIYVPFERDGQAYTLIDTAGV 237

Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
           RRR K  E IEKFSV+K ++++ +A+VV++L+D  + I+ QD+ +     ESGR L++ V
Sbjct: 238 RRRKKVSEKIEKFSVLKAIEAMQDAHVVVMLMDGSEGITDQDLTLLGLAIESGRGLVLAV 297

Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
           NKWD +  +QR  IK  +  +L F+S+A  + ISA+  + +     SI  VY ++   +S
Sbjct: 298 NKWDGLDSDQRAKIKYELDLRLQFISYAKTHLISALHGSGVGDLFSSIKKVYRAATNKVS 357

Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
           T+ + R L  AI +H P      R K+RYAH GG NPP ++IHGN++      YKRYLE 
Sbjct: 358 TADLNRVLEQAILDHQPPLVGGRRLKMRYAHLGGLNPPRVIIHGNKVDQTPAPYKRYLEN 417

Query: 421 YFYRTF 426
            F + F
Sbjct: 418 VFRKAF 423


>gi|399116783|emb|CCG19592.1| ribosomal RNA large subunit methyltransferase [Taylorella
           asinigenitalis 14/45]
          Length = 380

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/344 (53%), Positives = 245/344 (71%), Gaps = 7/344 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRAKQL  WIH+ G SDF+ MT+L+   R  L     I  P +++ Q+S D
Sbjct: 20  LVAKWGHKPFRAKQLINWIHQKGKSDFSNMTNLANDFRSHLTEYSVIATPKVITKQVSSD 79

Query: 592 GTRKWIFHVKKN-IIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GT KW+F V+ N  IETV+IPE +R TLCIS+Q GC + C FCSTG QGF RNL   EII
Sbjct: 80  GTIKWLFDVQNNNAIETVYIPEDDRGTLCISSQAGCTVACRFCSTGHQGFNRNLNTSEII 139

Query: 651 GQLWVTEFKLRREKNIK--INSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           GQ+W    ++++  N    + ++  R ITN+V MGMGEPLLNY   + A+KL++  +AYG
Sbjct: 140 GQVWWARDEIKKSLNTDSGLEAEDDRVITNVVFMGMGEPLLNYDQVLPAIKLLIDQNAYG 199

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LS+R V +STSG+IP +DKL+Q+CPV LAVSLHA N+ LR++L+P++KKYPL+EL+ AC+
Sbjct: 200 LSKRRVTVSTSGVIPFMDKLSQDCPVALAVSLHAPNDELRDQLIPLNKKYPLRELMDACN 259

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RYI ++PR  ITFEY ML G+NDTD HA +LI + R+ K     K+NLIPFN FP S L 
Sbjct: 260 RYIEFAPRDFITFEYIMLDGVNDTDAHAKQLIDICREVK----SKVNLIPFNPFPESGLR 315

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            S + R++ F+ IL ++GI  T RK RG+DI+AACGQL+G+  D
Sbjct: 316 RSSHERVRAFSAILNDAGIVATTRKTRGDDIDAACGQLAGDIKD 359


>gi|451812247|ref|YP_007448701.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium galatii TCC219]
 gi|451778149|gb|AGF49097.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium galatii TCC219]
          Length = 378

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/343 (57%), Positives = 237/343 (69%), Gaps = 12/343 (3%)

Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHV 600
           FR  QLQ+WIHKF    F+ MT++S  L+ KLK    I+A  I S+  S DGT KW+F  
Sbjct: 30  FRTGQLQQWIHKFSADSFDVMTNISNQLKNKLKEISKIEAMPIKSESFSKDGTIKWLFDA 89

Query: 601 -KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTE-- 657
              N IETVFIPEKNR TLCIS+Q GCA+NC FC+TGRQGF RNL+  EI+GQLW  +  
Sbjct: 90  GNSNAIETVFIPEKNRRTLCISSQAGCAVNCAFCATGRQGFNRNLSASEIVGQLWSAQKS 149

Query: 658 -----FKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
                 K    +N  I      QITNIV MGMGEPLLNY   + ++KL+L  +AYG SRR
Sbjct: 150 INNNSIKNEDLENKSIIKSSNDQITNIVFMGMGEPLLNYTQVLKSIKLLLDTNAYGFSRR 209

Query: 713 HVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
            V +STSG++PMIDKLA++CPV LAVSLHA+N+ LRNKLVPI+KKYPL +LI +C RYI 
Sbjct: 210 KVTVSTSGVVPMIDKLARDCPVALAVSLHAANDVLRNKLVPINKKYPLSDLIESCKRYIM 269

Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
            +PR  ITFEYCML  INDTD H  ELI+L+ + K    CKINLIPFN F NS     K 
Sbjct: 270 KAPRDFITFEYCMLSEINDTDNHLRELINLVSQIK----CKINLIPFNSFANSEFKAPKI 325

Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
            +I  FA  L+NSGI  T+RK RG+DI AACGQL+G   +I K
Sbjct: 326 EKINSFANKLLNSGIITTVRKTRGDDIYAACGQLAGNVKNITK 368


>gi|339483561|ref|YP_004695347.1| Histidyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
 gi|338805706|gb|AEJ01948.1| Histidyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
          Length = 422

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/362 (52%), Positives = 260/362 (71%), Gaps = 11/362 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+FID LN D+L+LRPEGTAS +R+VIE+NL+Y GP+RL+Y+GPMFRHE
Sbjct: 57   GEVTDIVEKEMYTFIDHLNNDSLTLRPEGTASCVRAVIEHNLLYAGPQRLYYAGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+G+ GPDIDAELI+MCSRLW  L +  + LE++++GN   R  
Sbjct: 117  RPQKGRYRQFHQVGVEALGYAGPDIDAELIVMCSRLWDLLGISGLRLEISTLGNAESRAL 176

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y ++++DS    ED    L+ N LR+LDSKN  ++EI+ N+PKL+D L+ +S 
Sbjct: 177  HRARLIKYFERYRDS--LDEDSLRRLHTNPLRILDSKNPGMQEIIENSPKLIDDLDVESC 234

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q IL    I+++IN +LVRG+DYYNRTVFEW TDKLG+Q ++C GGRYD L+++
Sbjct: 235  IHFEAMQHILREQGINFEINLRLVRGLDYYNRTVFEWVTDKLGAQGTVCAGGRYDGLLEQ 294

Query: 1108 FSNKFVPASGFAIGIERLIELIKKIN--INHNFSHQCDIYIVHVGKEAELKAFVLSENLR 1165
               K  PA GFA+GIERL+ L+++    I        DIYIVH G++    A+  +E+LR
Sbjct: 295  VGGKPAPACGFAMGIERLLALMQECGKKITQPVP---DIYIVHQGEQVMDYAWKCAESLR 351

Query: 1166 TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPT 1225
              G  V+L+C       SFKSQMK+A+A+ AN+A IIG++E+    + IK LR   E  +
Sbjct: 352  DEGFNVVLHCGGG----SFKSQMKKADATGANYAMIIGDDEVNAQEVTIKPLREPIEQAS 407

Query: 1226 LK 1227
            +K
Sbjct: 408  VK 409


>gi|348028472|ref|YP_004871158.1| GTP-binding protein EngA [Glaciecola nitratireducens FR1064]
 gi|347945815|gb|AEP29165.1| GTP-binding protein EngA [Glaciecola nitratireducens FR1064]
          Length = 480

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/441 (44%), Positives = 285/441 (64%), Gaps = 19/441 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA++PGLTRDR YG      + FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGPAKFENRGFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AI E+D+++F+VD R GL   D  I   LRK  + + LV NK
Sbjct: 61  TGD-EEGIDAAMAEQSLLAIDEADVVLFLVDARAGLTPDDIGIAEHLRKQDKAMYLVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH- 178
            + I+  S + DF++LG      I+A +G G+   + ++LT   P +K F   +      
Sbjct: 120 VDGIDGDSETADFFKLGFAEVLQIAAAHGRGVSQMMTHVLT---PLEKTFPDMQIVEEER 176

Query: 179 -------------SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
                            IK+AIVGKPNVGKSTLIN +LGE RV+ YD PGTTRDSI    
Sbjct: 177 DEEEDADAKLARLQASPIKLAIVGKPNVGKSTLINRILGEERVVVYDQPGTTRDSIFIPM 236

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           + ++++YILIDTAG+R+R K  E +EKFS++KTL++I E+NVV+L++DA++ ++ QD+++
Sbjct: 237 QRDDREYILIDTAGVRKRKKVSETVEKFSIVKTLQAIEESNVVLLVIDAREGVTDQDLSL 296

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F+  SGRSL++ VNKWD +  + ++ IK  + ++L F+ FA  +FISA+    +    
Sbjct: 297 LGFVLNSGRSLVLAVNKWDGLETHIKESIKRELDRRLGFVDFARLHFISALHGTGVGHLF 356

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           ES+   Y S+ + ++TS +T+ +  A  +H P      R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYKSATVRITTSVLTQIMEMAQNDHNPPLIHGRRVKMKYAHAGGYNPPVIVIHGN 416

Query: 406 RLKYIGNDYKRYLEKYFYRTF 426
           +LK + + YKRYL  Y+ +  
Sbjct: 417 QLKDLPDSYKRYLMNYYRKAL 437


>gi|302878619|ref|YP_003847183.1| histidyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581408|gb|ADL55419.1| histidyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 424

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 177/356 (49%), Positives = 259/356 (72%), Gaps = 7/356 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNGD L+LRPEGTAS +R+V+++NL+Y+ P+RL+YSGPMFRHE
Sbjct: 58   GEVTDIVEKEMYSFEDSLNGDQLTLRPEGTASCVRAVLQHNLLYNAPQRLYYSGPMFRHE 117

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPDIDAE I+MC+RLWK L L ++ L+LN++G+   R++
Sbjct: 118  RPQKGRYRQFHQVGVEALGFAGPDIDAEQILMCARLWKKLGLTDVTLQLNTLGDVESRQR 177

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y +++K+      +    L+ N LR+LDSKN  ++E++  AP+L+D L++ +L
Sbjct: 178  HRAKLIAYFEQNKE--LMDAEAVRRLHSNPLRILDSKNPAMQELIEAAPRLMDELDEAAL 235

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q IL  + ++++IN +LVRG+DYYNRTVFEW T +LG+Q +IC GGRYD L+++
Sbjct: 236  SHFAAVQAILTQHGVAFEINPRLVRGLDYYNRTVFEWVTTRLGAQGTICAGGRYDGLVEQ 295

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFA+GIERL+ L+++  +      Q D+Y+VH G+ A   A  ++E LR  
Sbjct: 296  IGGKPAPAMGFAMGIERLLVLLQEAGMALP-KPQVDVYVVHQGELAARLASSVAEQLRDY 354

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYED 1223
            GL+V+++C       SFKSQMK+A+AS A  A +IG++E  +N + +K ++   ++
Sbjct: 355  GLRVVMHCGGG----SFKSQMKKADASGACVAVVIGDDEAQSNEVSVKPMQGGAQE 406


>gi|114562298|ref|YP_749811.1| GTP-binding protein EngA [Shewanella frigidimarina NCIMB 400]
 gi|122300418|sp|Q085U2.1|DER_SHEFN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|114333591|gb|ABI70973.1| small GTP-binding protein [Shewanella frigidimarina NCIMB 400]
          Length = 488

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/450 (43%), Positives = 284/450 (63%), Gaps = 25/450 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLAGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R G+   D  I   LR   +   +V NK
Sbjct: 61  DGS-EEGIETKMAEQSLAAIEEADVVLFMTDARAGMTAADLAIAQHLRSRDKVTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK-----KKEF 174
            + I++ S   +F+ LG+G  + ++A  G G+ N ++  LT   PY +         +E 
Sbjct: 120 VDGIDADSACGEFWSLGLGEVYQMAAAQGRGVTNMIDYALT---PYAEAMGIVRELDEEG 176

Query: 175 TNIHSIEY---------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
             +                    IK+AI+GKPNVGKSTLIN +LGE RV+ YD PGTTRD
Sbjct: 177 EQVEREYTEEEAEAEQERLQNLPIKLAIIGKPNVGKSTLINRILGEERVVVYDEPGTTRD 236

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI        ++Y+LIDTAG+RRR+K  EVIEKFSVIKTLK++ +ANVV+L++DA++ I+
Sbjct: 237 SIYIPMSREGREYVLIDTAGVRRRSKVNEVIEKFSVIKTLKAVEDANVVLLVIDAREGIA 296

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+ +  F   +GR+L++ +NKWD I    +  +K+ + ++L F+ FA  +FISA+   
Sbjct: 297 EQDLGLLGFTLNAGRALVIAINKWDGIDQKVKDRVKSELDRRLGFIDFARIHFISALHGT 356

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG NPPI
Sbjct: 357 GVGHLYESIEEAYDSATRRVSTSMLTRVMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPI 416

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +VIHGN++K + + YKRY+  YF R+  ++
Sbjct: 417 VVIHGNQVKKLPDSYKRYMMNYFRRSLKVV 446


>gi|406941776|gb|EKD74177.1| hypothetical protein ACD_45C00050G0004 [uncultured bacterium]
          Length = 461

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/430 (45%), Positives = 285/430 (66%), Gaps = 11/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ +VGRPNVGKSTLFN LT SR ALV+++PG+TRDR YGE  I  + FI+IDTGG 
Sbjct: 1   MLPVIAIVGRPNVGKSTLFNCLTQSRAALVSHFPGMTRDRQYGEATIANRRFIVIDTGGM 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E K  +   M +Q++QAI+E+D +I +VD R GL   D+ I   LR   + I LV+NK
Sbjct: 61  TDE-KNDLDLLMAQQSQQAILEADQVILLVDARTGLTPADQFIVEKLRPLNKNIFLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++ SI+  DF++LG+G P+ ISA +   I   +++IL IE P      K E ++I  
Sbjct: 120 TEGLDFSIATADFFQLGLGTPYAISAAHSGRITELIQSILPIEEP------KPEESDIAG 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           I   K+A+VG+PNVGKSTLIN +LGE RV+ +D PGTTRDSI   F+  +K YILIDTAG
Sbjct: 174 I---KLAVVGRPNVGKSTLINRMLGEERVLVFDQPGTTRDSIFIPFKRFSKDYILIDTAG 230

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K FE  EKFSV+KTL++I   +VV+ ++DA + ++ QD+ +  FI +SG++L++ 
Sbjct: 231 VRQRGKIFETTEKFSVVKTLQAIETTHVVLFVMDAHEGVTEQDLRLLGFILDSGKALVIA 290

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   ++   +  + ++LNF+ F   +FISA+  + + +  +S++  Y S+   L
Sbjct: 291 MNKWDGMAVEEKDKARATLDRRLNFIPFVRIHFISALHGSGVGNLFDSVDEAYLSANKKL 350

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST ++T+ L  AI  H P   +  R KLRYAH GG NPP IVIHGN++  + + Y+RYL 
Sbjct: 351 STPKLTKILQEAIVQHSPPLVQGRRIKLRYAHPGGSNPPCIVIHGNQVSALPDAYRRYLA 410

Query: 420 KYFYRTFSLI 429
             +     L+
Sbjct: 411 NTYQARLKLM 420


>gi|308187766|ref|YP_003931897.1| GTP-binding protein engA [Pantoea vagans C9-1]
 gi|308058276|gb|ADO10448.1| GTP-binding protein engA [Pantoea vagans C9-1]
          Length = 496

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/458 (43%), Positives = 290/458 (63%), Gaps = 33/458 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FI+IDTGG 
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M +Q+  AI E+D+++F+VD R G++  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ DFY LG+G  H I+A +G G+ + +E  L   LP+ +  +  E T    
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIHAIAASHGRGVSSLIEEAL---LPWMEEAETVELTEEEE 176

Query: 180 IEY----------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
            +                             IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NQAYWAALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236

Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
           D PGTTRDSI    E + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 296

Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
           +DA   IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +
Sbjct: 297 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARIH 356

Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
           FISA+  + + +  ESI   YD S   ++TS +TR +  A  +H P   +  R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKYAH 416

Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            GG NPPI+VIHGN++K + + YKRYL  YF ++ +++
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLNVM 454


>gi|160872137|ref|ZP_02062269.1| GTP-binding protein EngA [Rickettsiella grylli]
 gi|159120936|gb|EDP46274.1| GTP-binding protein EngA [Rickettsiella grylli]
          Length = 455

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/432 (46%), Positives = 285/432 (65%), Gaps = 3/432 (0%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           P +VLVGRPNVGKS+LFNRLT +R ALV + PGLTRDR YG G +G + FI+IDTGG   
Sbjct: 15  PSIVLVGRPNVGKSSLFNRLTKTRQALVGDIPGLTRDRLYGRGIVGNRPFIVIDTGGLTG 74

Query: 63  EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
             +K I  +M +Q + AI E+D ++F+VD R+GL   D+ +   LR   + I LVINKSE
Sbjct: 75  CKEKNIAFQMEQQARNAIKEADHVLFLVDAREGLSLLDQQLIQQLRPFNKKITLVINKSE 134

Query: 123 NINSSI-SLDFYELGI--GNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +++++   +F  LG    +  IISA++G G++  +E + T     K    +   +    
Sbjct: 135 GLDAALLQSEFSPLGFRTSSLSIISAIHGYGLQTLMEKVFTHGACIKTLTAEHILSEKAI 194

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IKVAIVGKPNVGKSTL+N +LGE RVI +D PGTTRDSI +  EY  + YI IDTAG
Sbjct: 195 KPKIKVAIVGKPNVGKSTLLNRILGEERVIVFDQPGTTRDSIANDIEYRGQHYIFIDTAG 254

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRR++KT+E I+KFSVIK+L++I  ++VV+LL+DAQ+ IS QD+++  FI ESG+++I+ 
Sbjct: 255 IRRKSKTWEAIDKFSVIKSLQAIEASHVVLLLIDAQEGISEQDLHLLGFILESGKAVIIA 314

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  +QR  IK ++ ++L F+SFA   FISA+    +      I   Y S+  +L
Sbjct: 315 VNKWDGLSKDQRDQIKKDLDRRLQFISFAQVIFISALHGTGVGHLFTLIRQAYQSATRNL 374

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           STS++TR L  A+  H P      + KLRYAH GG NPPII+IHG    ++   Y+RYLE
Sbjct: 375 STSQLTRLLEQAVNTHQPPLSHGRQVKLRYAHPGGYNPPIILIHGQYASFLPESYRRYLE 434

Query: 420 KYFYRTFSLIDA 431
            ++ +   ++ +
Sbjct: 435 NFYRKALKIVGS 446



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 27/226 (11%)

Query: 174 FTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
           FT +       + +VG+PNVGKS+L N L    + +  D PG TRD +       N+ +I
Sbjct: 6   FTGMTISSLPSIVLVGRPNVGKSSLFNRLTKTRQALVGDIPGLTRDRLYGRGIVGNRPFI 65

Query: 234 LIDTAGI---RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
           +IDT G+   + +N  F++ +     +   +I EA+ V+ L+DA++ +S  D  +   + 
Sbjct: 66  VIDTGGLTGCKEKNIAFQMEQ-----QARNAIKEADHVLFLVDAREGLSLLDQQLIQQLR 120

Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
              + + + +NK + +      ++++     L F + ++ + ISAI    + + ME +  
Sbjct: 121 PFNKKITLVINKSEGL---DAALLQSEF-SPLGFRTSSL-SIISAIHGYGLQTLMEKV-F 174

Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
            + + I  L+   I               +K I+PK++ A  G  N
Sbjct: 175 THGACIKTLTAEHI-------------LSEKAIKPKIKVAIVGKPN 207


>gi|372268293|ref|ZP_09504341.1| GTP-binding protein Der [Alteromonas sp. S89]
          Length = 465

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/429 (46%), Positives = 280/429 (65%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVANY GLTRDR YGE        I++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTKSRDALVANYAGLTRDRKYGEAEFDGHKMILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
               ++GI   M +Q+ QAI E+D ++F+VD R GL   D++I   LR   +P +LV NK
Sbjct: 61  S-GGEEGIDAAMAQQSMQAIEEADFVLFMVDCRAGLTPADEMIAERLRTRSKPTILVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +N  I+L  FYELGIG     +A +G G+++ +E ++  +LP        E   +  
Sbjct: 120 VDGVNPDIALAPFYELGIGELFPTTATHGRGVRSLMERLVG-DLP-----DSGEEELVDE 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+ IVG+PNVGKSTL+N LLGE+RV+ +D PGTTRDS+   +E + K Y +IDTAG
Sbjct: 174 ASGIKIGIVGRPNVGKSTLVNRLLGEDRVVVFDQPGTTRDSVYINYERDEKPYTIIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR    E +EKFS++KTL+++ +ANVV+L++DA + +  QD+++   + +SGR+L+V 
Sbjct: 234 IRRRKNVKESVEKFSIVKTLQAVEDANVVVLVIDASEGLVDQDLHLMGTVIQSGRALVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + R  +K  ++++L F+ FA  +FISA+    + +  ESI   Y S+   L
Sbjct: 294 LNKWDGLDPDHRDFVKTELERRLRFVEFADIHFISALHGTGVGNLYESIEAAYQSATDKL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ +TR L  A+  H P      R KLRYAH GG+NPP+IVIHGN+   + N Y RYLE
Sbjct: 354 STNHLTRILQWAVSEHQPPLVNGHRIKLRYAHAGGQNPPVIVIHGNQTDQVPNHYVRYLE 413

Query: 420 KYFYRTFSL 428
           K F +   L
Sbjct: 414 KTFRKALDL 422


>gi|319943739|ref|ZP_08018020.1| histidine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742972|gb|EFV95378.1| histidine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 434

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/383 (47%), Positives = 255/383 (66%), Gaps = 7/383 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            G  TDIV+KEMYSF D LNG+ L+LRPEGTA V+R+VIE+NL+YDGP+RLWY GPMFRHE
Sbjct: 58   GTVTDIVEKEMYSFRDALNGEELTLRPEGTAGVVRAVIEHNLLYDGPRRLWYLGPMFRHE 117

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+G+ GP++DAE+I M  RLW +L ++ + L++NSIG+  ER +
Sbjct: 118  RPQRGRYRQFHQVGVEALGYGGPEVDAEVIAMGQRLWDDLGIEGLQLQINSIGDAPERAR 177

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  DLI++ +KH  ++   E+ K  L+ N LR+LDSKN  ++EI+  AP+L+DYLE  S 
Sbjct: 178  HRQDLIDHFEKH--AELLDEEAKRRLHANPLRILDSKNPAMQEIIEQAPRLIDYLEGPSR 235

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
            +HF  ++  L    I   +N +LVRGMDYYNRTVFEW TD+LG+Q ++CGGGRYD LI+ 
Sbjct: 236  EHFEQLRGYLARLGIEATLNPRLVRGMDYYNRTVFEWVTDRLGAQATVCGGGRYDALIEM 295

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L+++           D+Y++  G      A   +E LR  
Sbjct: 296  LGGKPAPACGFAIGVERLLDLVEQAG-GLGEGDAPDVYLISSGDGTMAAALHTAEALRAR 354

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            G++V+++        SFKSQ KRA AS A+ A +IGE+E+      +K LR        +
Sbjct: 355  GIEVLMHAGGG----SFKSQFKRAGASGAHLALVIGEDELKAGEATLKWLREGEAGQGGR 410

Query: 1228 QISISFKDAENYFYKKIIKNINN 1250
            Q+ I   DA     + ++   + 
Sbjct: 411  QVRIRLDDAPEAVGRALLGQTDE 433


>gi|170725905|ref|YP_001759931.1| GTP-binding protein EngA [Shewanella woodyi ATCC 51908]
 gi|238688689|sp|B1KLB1.1|DER_SHEWM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|169811252|gb|ACA85836.1| small GTP-binding protein [Shewanella woodyi ATCC 51908]
          Length = 488

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/451 (42%), Positives = 287/451 (63%), Gaps = 27/451 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA+YPGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI   M +Q+  AI E+D+++F+ D R GL   D+ I+  LR+  +   +V NK
Sbjct: 61  DG-TEEGIETHMAEQSMAAIEEADVVLFLTDARAGLTAADQAISEHLRRREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  L    PY +            
Sbjct: 120 VDGIDADSACAEFWALGLGEVYQMAAAQGRGVTNMIEYALA---PYAEALGLNRDGDDEE 176

Query: 170 -----------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTR 218
                       + E T +  +  IK+A++GKPNVGKSTL N +LGE RV+ YD PGTTR
Sbjct: 177 EKEEREYTEEEAEAEQTRLQDLP-IKLAVIGKPNVGKSTLTNRILGEERVVVYDAPGTTR 235

Query: 219 DSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
           DSI    E + ++Y+LIDTAG+RRR+K  E +EKFSVIKTLK++ + NVV+L++DA++ I
Sbjct: 236 DSIYIPMERDGREYVLIDTAGVRRRSKVNETVEKFSVIKTLKAVEDCNVVLLIVDAREGI 295

Query: 279 SAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKL 338
           + QD+ +  F   +GR+L++ VNKWD I  + +  +K+ + ++L F+ FA  +FISA+  
Sbjct: 296 AEQDLGLLGFALNAGRALVIAVNKWDGIDQDIKDRVKSELDRRLGFIDFARIHFISALHG 355

Query: 339 NNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPP 398
             +    ES+   Y+S+   +STS +TR +  A  +H P      R KL+YAH GG NPP
Sbjct: 356 TGVGHLFESVQEAYESATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHAGGYNPP 415

Query: 399 IIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           I+V+HGN++K + + YKR++  Y+ R+  ++
Sbjct: 416 IVVVHGNQVKKLPDSYKRFMMNYYRRSLKVM 446


>gi|329120380|ref|ZP_08249047.1| cfr family radical SAM enzyme [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327462335|gb|EGF08661.1| cfr family radical SAM enzyme [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 362

 Score =  387 bits (994), Expect = e-104,   Method: Composition-based stats.
 Identities = 182/344 (52%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE PFRAKQ+ +W+H  G +DF +MTDL+ SLR KL+    + AP +M+ Q S DGTR
Sbjct: 19  EMGERPFRAKQVMRWMHWGGAADFAEMTDLAKSLRAKLEEHACVGAPALMASQESRDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EI+GQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESERGTLCISSQVGCALECTFCSTGRQGFNRNLTTAEIVGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K +    + +R I+N+VMMGMGEPL NY + + +L ++L DH YGLSRR 
Sbjct: 139 WWAN------KALGATPKDERVISNVVMMGMGEPLANYDNVVRSLSVMLDDHGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L ++ PV LAVSLHASN+++R+++VP++KKYPLK+L+ AC RY+  
Sbjct: 193 VTVSTSGMVPQMDRLKEDMPVALAVSLHASNDHVRDQIVPLNKKYPLKDLMAACRRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEY ML G+ND   HA EL+ L+        CK NLIPFN FP+S    S   
Sbjct: 253 APRDFVTFEYVMLDGVNDKAEHARELLKLVED----VPCKFNLIPFNPFPHSGYERSSAE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I+IF  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRIFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVKDKTRRQ 352


>gi|260773381|ref|ZP_05882297.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14]
 gi|260612520|gb|EEX37723.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14]
          Length = 496

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/456 (42%), Positives = 297/456 (65%), Gaps = 29/456 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +G+  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGENEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR+  +  +LV+NK
Sbjct: 61  DG-TEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTSADEAIAQHLRRIEKNAILVVNK 119

Query: 121 SENINSSIS-LDFYELGIGNP-HIISALYGNGIKNFLENILTI----------------- 161
            + I++  +  +F++LG+G+  + I+A +G G+   ++  L                   
Sbjct: 120 VDGIDADAACAEFWQLGMGSQMYQIAAAHGRGVAVLIDRALNPLAEQMNEELQNLEDLTE 179

Query: 162 --------ELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
                   +L Y +   + EF  +   + IK+AI+G+PNVGKSTL N +LGE RV+ YD 
Sbjct: 180 FVDTDEPEQLEYTEEEAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 238

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI    + ++++Y+LIDTAG+RRR    E +EKFSV+KTLK+I +ANVV+L++D
Sbjct: 239 PGTTRDSIYIPMQRDDREYVLIDTAGVRRRKSINETVEKFSVVKTLKAIEDANVVLLVID 298

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A++NIS QD+++  F   +GRS+++ +NKWD + ++ ++ +K  + ++L F+ FA  +FI
Sbjct: 299 ARENISDQDLSLLGFTLNAGRSVVIAINKWDGLSNDIKERVKKELDRRLGFVDFARIHFI 358

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+    +    ES+   Y S+   + TS +TR +  A  +H P   +  R KL+YAH G
Sbjct: 359 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPLIRGRRVKLKYAHAG 418

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           G NPPIIVIHGN++  + + YKRYL  Y+ ++  ++
Sbjct: 419 GYNPPIIVIHGNQVNELPHSYKRYLMNYYRKSLEIM 454


>gi|290475995|ref|YP_003468891.1| GTP-binding protein, essential for cell growth [Xenorhabdus
           bovienii SS-2004]
 gi|289175324|emb|CBJ82127.1| GTP-binding protein, essential for cell growth [Xenorhabdus
           bovienii SS-2004]
          Length = 496

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/460 (43%), Positives = 292/460 (63%), Gaps = 35/460 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M  Q+  AI E+DI++F+VD R G++  D  I   LR   +   LV NK
Sbjct: 61  D-GTEDGVETHMAAQSLMAIEEADIVLFMVDARSGMMPADHAIAKHLRSREKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK---FFKKKEFTN 176
           ++ I++  ++ +FY LG+G+ + I+A +G G+   +E++L   LP+ +     + +    
Sbjct: 120 TDGIDTDTAIPEFYSLGLGDIYSIAASHGRGVTQLIEHVL---LPFSEKEKTEEVELTEE 176

Query: 177 IHSIEY---------------------------IKVAIVGKPNVGKSTLINSLLGENRVI 209
             +  Y                           +K+AIVG+PNVGKSTL N +LGE RV+
Sbjct: 177 EANAAYWSEIEQAELEAAEEEEKEAVFDPTTLPLKLAIVGRPNVGKSTLTNRILGEERVV 236

Query: 210 TYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVI 269
            YD PGTTRDSI    E + ++YILIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+
Sbjct: 237 VYDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVL 296

Query: 270 LLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAM 329
           L++DA++ +S QD+++  FI  SGRSL++ VNKWD +    R  +K+ +  +L F+ FA 
Sbjct: 297 LIVDAREGVSDQDLSLLGFILNSGRSLVIAVNKWDGMSQEDRDHVKDMLDLRLGFVDFAR 356

Query: 330 FNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRY 389
            +FISA+  + + +  +SI   Y+S+   +STS +TR +  A ++H P   +  R K++Y
Sbjct: 357 VHFISALHGSGVGNLFDSILEAYESATHRVSTSMLTRIMHMAEEDHQPPMIRGRRVKMKY 416

Query: 390 AHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           AH GG NPPI+VIHGN++  + + YKRYL  YF R+  ++
Sbjct: 417 AHAGGYNPPIVVIHGNQVTNLPDSYKRYLMNYFRRSLKVM 456


>gi|334129943|ref|ZP_08503746.1| Histidine tRNA synthetase/ligase [Methyloversatilis universalis FAM5]
 gi|333444979|gb|EGK72922.1| Histidine tRNA synthetase/ligase [Methyloversatilis universalis FAM5]
          Length = 428

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/383 (50%), Positives = 255/383 (66%), Gaps = 13/383 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL+LRPEGTAS +R+V E+NL+YD P++LWY GPMFRHE
Sbjct: 47   GEVTDIVEKEMYSFEDALNGENLTLRPEGTASCVRAVTEHNLLYDSPRKLWYMGPMFRHE 106

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+G+ GPDIDAELIIMC RLW +L L  I LE+NS+G+  ER K
Sbjct: 107  RPQKGRYRQFHQVGVEALGYAGPDIDAELIIMCQRLWDDLGLMGIKLEINSLGSPEERLK 166

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +LI Y + H+D     ED K  L+ N LR+LD+KN  ++ ++  APKL D+L + SL
Sbjct: 167  HRAELIAYFEAHRDQ--LDEDAKRRLHSNPLRILDTKNPAMQALVEAAPKLSDFLGEASL 224

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  IQ  L   NI+++IN +LVRG+DYYN TVFEW TD+LG+Q ++C GGRYD LI +
Sbjct: 225  AHFNAIQDTLRAANIAFRINPRLVRGLDYYNLTVFEWVTDQLGAQGTVCAGGRYDGLIAQ 284

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA+GFA+GIERL+ L      +     + + Y+VH G  A+  AF L+E LR  
Sbjct: 285  LGGKPAPAAGFAMGIERLMALWDTQEAD-ALVERVEAYVVHSGTGAQAAAFALAERLRDG 343

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            G   +++C       SFKSQMKRA+AS A  A I+GE E+    +  K LR        +
Sbjct: 344  GFATLMHCGGG----SFKSQMKRADASGAMVALILGEEEVAAGEVTFKPLRGG------E 393

Query: 1228 QISISFKDAENYFYKKIIKNINN 1250
            Q+ IS  D   +    ++    +
Sbjct: 394  QMRISADDVGEHLAAMLLGGYGD 416


>gi|284006778|emb|CBA72042.1| GTP-binding protein [Arsenophonus nasoniae]
          Length = 493

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/454 (44%), Positives = 291/454 (64%), Gaps = 26/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+     + FIIIDTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKAEFAGQEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI + M  Q+  AI E+DI+ F+VD R GL+  D  I   LR   +   L+ NK
Sbjct: 61  DGS-EEGIENHMASQSLLAIEEADIVFFMVDVRSGLMPADHAIAKHLRSRKKETYLLANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT----------IELPYKK-- 167
           ++ ++    L DFY LG+ + + I+A +G G+   +E ++           +EL  ++  
Sbjct: 120 TDGLDIDTVLGDFYALGMRDIYPIAASHGRGVTQLIEKVVAPYSPQTLANDMELSEEEAN 179

Query: 168 ---FFKKKEFTNIHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
              +  ++E   + S E          IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 AAYWLAQEEKVALESSEEEAFDPRSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDLPG 239

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E +  +Y+LIDTAG+R+R K  E +EKFSVIKTL+SI +ANVV+L++DA+
Sbjct: 240 TTRDSIYIPMERDGCEYVLIDTAGVRKRGKITETVEKFSVIKTLQSIEDANVVLLVIDAR 299

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           Q IS QD+++  FI  +GRSL++ VNKWD +    R+ +K+ +  +L F+ FA  +FISA
Sbjct: 300 QGISDQDLSLLGFILNAGRSLVIAVNKWDGMSQEDRQSVKDMLDLRLGFIDFAKVHFISA 359

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ESI   Y+S+   + T+ +TR +  A + H P   +  R K++YAH GG 
Sbjct: 360 LHGSGVGNLFESIQEAYESATRRVGTALLTRIMKMAEEEHQPPLIRGRRVKMKYAHAGGY 419

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++  + + YKRYL  YF RT  ++
Sbjct: 420 NPPIVVIHGNQVADLPDSYKRYLMNYFRRTLQVM 453


>gi|157374575|ref|YP_001473175.1| GTP-binding protein EngA [Shewanella sediminis HAW-EB3]
 gi|189037163|sp|A8FT74.1|DER_SHESH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|157316949|gb|ABV36047.1| small GTP-binding protein [Shewanella sediminis HAW-EB3]
          Length = 488

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/454 (42%), Positives = 287/454 (63%), Gaps = 33/454 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI   M +Q+  AI E+D+++F+ D R GL   D+ I   LR+  +   +V NK
Sbjct: 61  DG-TEEGIETHMAEQSLAAIEEADVVLFLTDARAGLTAADQAICEHLRRREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  L    PY +            
Sbjct: 120 VDGIDADSACAEFWALGLGEVYQMAAAQGRGVTNMIEYALA---PYAEALGLNRDGDEDE 176

Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
                         ++K   ++     IK+AI+GKPNVGKSTL N +LGE RV+ YD+PG
Sbjct: 177 DEEEREYSEEEAEAEQKRLQDLP----IKMAIIGKPNVGKSTLTNRILGEERVVVYDSPG 232

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y++IDTAG+RRR+K  E +EKFSVIKTLK++ + NVV+L++DA+
Sbjct: 233 TTRDSIYIPMERDGREYVMIDTAGVRRRSKVHETVEKFSVIKTLKAVEDCNVVLLIIDAR 292

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + I+ QD+ +  F   +GR+L++ VNKWD I  + +  +K+ + ++L F+ FA  +FISA
Sbjct: 293 EGIAEQDLGLLGFALNAGRALVIAVNKWDGIDQDIKDRVKSELDRRLGFIDFARIHFISA 352

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ES+   YDS+   +STS +TR +  A  +H P      R KL+YAH GG 
Sbjct: 353 LHGTGVGHLFESVQEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGY 412

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+V+HGN++K + + YKR++  Y+ R+  ++
Sbjct: 413 NPPIVVVHGNQVKKLPDSYKRFMMNYYRRSLKVM 446


>gi|257093692|ref|YP_003167333.1| radical SAM enzyme, Cfr family [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046216|gb|ACV35404.1| radical SAM enzyme, Cfr family [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 373

 Score =  387 bits (993), Expect = e-104,   Method: Composition-based stats.
 Identities = 183/343 (53%), Positives = 248/343 (72%), Gaps = 6/343 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E GE PFRA+Q+ +W+H+FG  DF+ MTD++ SLR+KL+ +  +  P +++D++S DGTR
Sbjct: 19  ECGEKPFRARQVLRWLHRFGQLDFDAMTDIARSLREKLRATAQVLPPVVIADRLSDDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           K++F V   N +E VFIPE  R TLCISTQ GCA++C FCSTG+QGF RNLTV EI+GQL
Sbjct: 79  KFLFDVGGGNAVEAVFIPEAERGTLCISTQAGCALDCSFCSTGKQGFNRNLTVAEIVGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W     L      +  + G+R I+N+V+MGMGEPL N  +T+ AL+L+L D+AYGLSRR 
Sbjct: 139 WQARHSLGAYAAGE-TAGGERVISNVVLMGMGEPLANLDNTVTALRLMLDDNAYGLSRRR 197

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++P +D+L  ECPV LAVSLHA N+ LR++LVPI++KYPL EL+ AC RY+  
Sbjct: 198 VTVSTSGLVPAMDRLRNECPVALAVSLHAPNDRLRDELVPINRKYPLHELMSACLRYLEK 257

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  +TFEY ML G+ND+D  A EL++L R       CK NLIPFN FP S    S   
Sbjct: 258 APRDFVTFEYVMLAGVNDSDAQAHELLALTRD----VPCKFNLIPFNPFPGSPYHRSSAP 313

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           RI+ FA+ L+++G+  T RK RG+DI+AACGQL+G+  D  ++
Sbjct: 314 RIRQFAETLIDAGVVTTTRKTRGDDIDAACGQLAGQVLDRTQR 356


>gi|409425601|ref|ZP_11260185.1| GTP-binding protein Der [Pseudomonas sp. HYS]
          Length = 487

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/441 (43%), Positives = 288/441 (65%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEARWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++G+  +M +Q+  AI E+D+++F+VD R GL   D++I+  LRK  +   LV NK
Sbjct: 61  SGD-EQGMDEKMAEQSLLAIEEADVVLFLVDARAGLTAADQMISEHLRKRNKRSFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK--------FFKK 171
            +NI+   ++ +F  LG+GN   ++   G G+ N LE +L+ + P  K          + 
Sbjct: 120 IDNIDPLAAIAEFSPLGMGNAIGVAGAQGRGVNNLLEAVLS-DFPRDKDEEEIDTDVAEG 178

Query: 172 KEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
           +E   I      + IK+AI+G+PNVGKSTL+N +LGE RVI YD PGTTRDSI   FE N
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQPGTTRDSIYIPFERN 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
            +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 EEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             E+GR++++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +  +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMQPSERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYQSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
            + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+++
Sbjct: 359 QNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGNQVE 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            +   Y RYLE  + R   L+
Sbjct: 419 KVPKSYSRYLENTYRRVLKLV 439


>gi|348590089|ref|YP_004874551.1| ribosomal RNA large subunit methyltransferase N [Taylorella
           asinigenitalis MCE3]
 gi|347973993|gb|AEP36528.1| Ribosomal RNA large subunit methyltransferase N [Taylorella
           asinigenitalis MCE3]
          Length = 380

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/344 (53%), Positives = 244/344 (70%), Gaps = 7/344 (2%)

Query: 532 IVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFD 591
           +V + G  PFRAKQL  WIH+ G SDF+ MT+L+   R  L     I  P +++ Q+S D
Sbjct: 20  LVAKWGHKPFRAKQLINWIHQKGKSDFSNMTNLANDFRSHLTEYSVIATPKVITKQVSSD 79

Query: 592 GTRKWIFHVKKN-IIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEII 650
           GT KW+F V+ N  IETV+IPE +R TLCIS+Q GC + C FCSTG QGF RNL+  EII
Sbjct: 80  GTIKWLFDVQNNNAIETVYIPEDDRGTLCISSQAGCTVACRFCSTGHQGFNRNLSTSEII 139

Query: 651 GQLWVTEFKLRREKNIK--INSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
           GQ+W    ++++  N      ++  R ITN+V MGMGEPLLNY   + A+KL++  +AYG
Sbjct: 140 GQVWWARDEIKKSLNTDSGFEAEDDRVITNVVFMGMGEPLLNYDQVLPAIKLLIDQNAYG 199

Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
           LS+R V +STSG+IP +DKL+Q+CPV LAVSLHA N+ LR++L+P++KKYPL+EL+ AC+
Sbjct: 200 LSKRRVTVSTSGVIPFMDKLSQDCPVALAVSLHAPNDELRDQLIPLNKKYPLRELMDACN 259

Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
           RYI ++PR  ITFEY ML G+NDTD HA +LI + R+ K     K+NLIPFN FP S L 
Sbjct: 260 RYIDFAPRDFITFEYIMLDGVNDTDAHAKQLIDICREVK----SKVNLIPFNPFPESGLR 315

Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            S + R++ F+ IL  +GI  T RK RG+DI+AACGQL+G+  D
Sbjct: 316 RSSHERVRAFSAILNGAGIVATTRKTRGDDIDAACGQLAGDIKD 359


>gi|451823104|ref|YP_007459378.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium desouzaii TCC079E]
 gi|451775904|gb|AGF46945.1| ribosomal RNA large subunit methyltransferase N [Candidatus
           Kinetoplastibacterium desouzaii TCC079E]
          Length = 371

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/339 (56%), Positives = 244/339 (71%), Gaps = 8/339 (2%)

Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHV 600
           +R  Q++ WI+K+ V  F++MT+L + LR  LK +  I+   + +  IS DGT KW+F V
Sbjct: 28  YRVAQIKSWIYKYHVDSFDQMTNLPVKLRNFLKETAKIEPMSLKTQNISSDGTMKWLFDV 87

Query: 601 KK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTEFK 659
              N IETV IP+ +R TLCIS+Q GCA+NC FC TG+QGF RNLT  EII QLW  +  
Sbjct: 88  GNGNAIETVLIPDIDRYTLCISSQAGCAVNCSFCYTGQQGFNRNLTTNEIISQLWWAQKS 147

Query: 660 LRRE---KNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVIL 716
           +  +    NI+ +S    +ITN+VMMGMGEPLLNY   I AL+L++ D+AY LSRR + L
Sbjct: 148 INDKFPKNNIQDDSLAASKITNVVMMGMGEPLLNYGQVIPALRLMMDDNAYSLSRRRITL 207

Query: 717 STSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSPR 776
           STSGI+PMIDK+AQ+CPV LAVSLHA NN+LRNKL+PI+KKYPL+ELI +C  Y++ +PR
Sbjct: 208 STSGIVPMIDKMAQDCPVSLAVSLHAPNNSLRNKLMPINKKYPLEELIKSCKNYVSRAPR 267

Query: 777 HMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRIK 836
             +TFEYCML  IND D HA+ELI L+     +  CK+NLIPFN FP+SNL  S  +RI 
Sbjct: 268 DFVTFEYCMLENINDNDDHAVELIELIS----VLKCKVNLIPFNSFPSSNLKRSSLNRIL 323

Query: 837 IFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
            FAKIL +SGI  TIRK RG+DI AACGQL+G   +I K
Sbjct: 324 SFAKILNDSGIITTIRKTRGDDILAACGQLAGNVDNITK 362


>gi|213155967|ref|YP_002318012.1| GTP-binding protein EngA [Acinetobacter baumannii AB0057]
 gi|301346486|ref|ZP_07227227.1| GTP-binding protein EngA [Acinetobacter baumannii AB056]
 gi|301594209|ref|ZP_07239217.1| GTP-binding protein EngA [Acinetobacter baumannii AB059]
 gi|421798754|ref|ZP_16234765.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Canada
           BC1]
 gi|254783128|sp|B7I5H1.1|DER_ACIB5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|213055127|gb|ACJ40029.1| small GTP-binding protein [Acinetobacter baumannii AB0057]
 gi|410411403|gb|EKP63274.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Canada
           BC1]
          Length = 469

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/430 (44%), Positives = 296/430 (68%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E + GI + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  -GESECGIDNYMAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L  ++P      + E    H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDENPEEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A   H P   +  R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|339477885|ref|YP_004706705.1| 50S ribosomal subunit stability factor [Candidatus Moranella
           endobia PCIT]
 gi|338172436|gb|AEI74837.1| 50S ribosomal subunit stability factor [Candidatus Moranella
           endobia PCIT]
          Length = 489

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/450 (46%), Positives = 289/450 (64%), Gaps = 24/450 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT + DALV + PGLTRDR YG      K FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTLTCDALVVDCPGLTRDRKYGRAKWKDKEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           + +  KGI   + +QT  AI E+DI++FIVDGR GL+  D +I   LRKS +  V++ NK
Sbjct: 61  DDDQIKGIAANIARQTLLAIEEADIVLFIVDGRAGLMAADLVIAKHLRKSQKNTVVIANK 120

Query: 121 SENI--NSSISLDFYELGIGNPHIISALYGNGIKNFLENI--------LTIELPYKKFFK 170
           +E I  +S++S DFY LG+GN   ISA +G GI    E I        L +E   K  ++
Sbjct: 121 TEGIAKDSAMS-DFYALGMGNIVPISASHGTGINYLREQIILPLVNACLQVEDAEKWLYE 179

Query: 171 KKEFTNI---------HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
           + +   +            + IK+AI+G+PNVGKSTLIN L+GE RVI YD PGTTRDSI
Sbjct: 180 EAKTETLAVQENQLFNQQSQPIKLAIIGRPNVGKSTLINRLVGEERVIVYDMPGTTRDSI 239

Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
                ++ ++Y+LIDTAG+R+R K    +EKFSVIKT+++I +ANVV+L+LDA Q IS Q
Sbjct: 240 YVPMVHDGQQYLLIDTAGVRKRRKVTGKVEKFSVIKTIQAIEDANVVLLVLDAHQCISDQ 299

Query: 282 DINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNI 341
           D+++   I   GRSL++ VNKWD +   +R ++K  +   L F++FA  +FISA+    +
Sbjct: 300 DLSLLGLIINKGRSLVIAVNKWDGMSSKKRDVLKETLNNSLGFINFARVHFISALHDRGV 359

Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPP--CRKKLIRPKLRYAHQGGKNPPI 399
            +  ES+N  Y  +   +ST+ +TR +  A+  H P   R + ++PK  YAH GG NPPI
Sbjct: 360 GNLFESVNEAYQCATKRVSTAMLTRIMYMAVAEHQPPLVRGRRVKPK--YAHAGGYNPPI 417

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            VIHG ++  + + YKRYL  YF R+ +++
Sbjct: 418 FVIHGTQVTDLTDSYKRYLINYFRRSLNIM 447


>gi|330446667|ref|ZP_08310319.1| small GTP-binding domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490858|dbj|GAA04816.1| small GTP-binding domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 500

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/459 (42%), Positives = 289/459 (62%), Gaps = 31/459 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   + +  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR   +P  LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSRDKPTFLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT----------IELPYKKFF 169
            + I++ S   +F+ LG+   + I+A    G+   +E  L            E   ++  
Sbjct: 120 VDGIDADSACAEFWRLGVDAMYQIAATQNRGVTALMERALAPFSDKLNAELAENGEEQEV 179

Query: 170 KKKEFTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVIT 210
             ++ T++  IE                    IK+AI+G+PNVGKSTL N +LGE RV+ 
Sbjct: 180 SIEDLTSVEDIEKANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVV 239

Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
           YD PGTTRDSI    E + ++Y+LIDTAGIRRR    + +EKFSVI+TLK++ +ANVV+L
Sbjct: 240 YDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHQAVEKFSVIQTLKAVEDANVVLL 299

Query: 271 LLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMF 330
           ++DA++NIS QD+++  F   +GRSL++ VNKWD + +  ++ +K+ + ++L F+ FA  
Sbjct: 300 VIDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARI 359

Query: 331 NFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYA 390
           +FISA+    +    ES+   Y S+   +STS +TR +  A  +H P   +  R KL+YA
Sbjct: 360 HFISALHGTGVGHLYESVIEAYQSATKRISTSLLTRIMQMAQDDHQPPMIRGRRVKLKYA 419

Query: 391 HQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           H GG NPPIIV+HGN++  +   YKRYL  Y+ ++  ++
Sbjct: 420 HAGGYNPPIIVVHGNQVNELPGSYKRYLMNYYRKSLEMM 458


>gi|183599734|ref|ZP_02961227.1| hypothetical protein PROSTU_03237 [Providencia stuartii ATCC 25827]
 gi|386741985|ref|YP_006215164.1| GTP-binding protein Der [Providencia stuartii MRSN 2154]
 gi|188021993|gb|EDU60033.1| ribosome biogenesis GTPase Der [Providencia stuartii ATCC 25827]
 gi|384478678|gb|AFH92473.1| GTP-binding protein Der [Providencia stuartii MRSN 2154]
          Length = 490

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/454 (44%), Positives = 290/454 (63%), Gaps = 29/454 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M  Q+ QAI E+D+++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
           ++ I++ S+  DFY LG+G  H I+A +G G+   +E  L    P+              
Sbjct: 120 TDGIDADSVIGDFYSLGLGEIHPIAASHGRGVTQLIEKSLK---PFIEIEEEVELTEEEE 176

Query: 166 -KKFFKKKEFTNIHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
              ++  +E       E          IK+AIVG+PNVGKSTL N +LGE RV+ +D PG
Sbjct: 177 NAAYWAAQEAEAEFDEEDEEFDPTTLPIKLAIVGRPNVGKSTLTNRILGEERVVVFDMPG 236

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++Y+LIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 237 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITETVEKFSVIKTLQAIEDANVVLLVIDAR 296

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  +GRSL++ VNKWD +    R+ +K+ ++ +L F+ FA  +FISA
Sbjct: 297 EGISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFISA 356

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   Y+S+   + T+ +TR +  A + H P   +  R K++YAH GG 
Sbjct: 357 LHGSGVGNLFESVEEAYESATRRVGTALLTRIMKMAEEEHQPPLIRGRRVKMKYAHAGGH 416

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++  + + YKRYL  YF R+  ++
Sbjct: 417 NPPIVVIHGNQVSDLPDSYKRYLMNYFRRSLQVM 450


>gi|85712733|ref|ZP_01043778.1| GTP-binding protein EngA [Idiomarina baltica OS145]
 gi|85693465|gb|EAQ31418.1| GTP-binding protein EngA [Idiomarina baltica OS145]
          Length = 479

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/439 (43%), Positives = 289/439 (65%), Gaps = 11/439 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYQFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M KQ+ QAI E+D+++F+VD R G+   D+ I   LRK  + + LV NK
Sbjct: 61  HGD-EEGIDEVMAKQSLQAIEEADVVLFLVDARDGVTVGDQAIATHLRKQKKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENI---LTIELPYKKFFKKKEFTN 176
            + I++  ++ DFY L +GN + I+A +G G+++ L++    L  + P      + +  +
Sbjct: 120 IDGIDADSAMADFYSLALGNLYGIAAAHGRGVEHLLDSCFKPLADDYPDVIVPDEPDSED 179

Query: 177 IH--SIEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
           +    I+Y    +K+AIVG+PNVGKSTL N +LGE+RV+ +D PGTTRDS+    E + +
Sbjct: 180 LEHDEIDYDALPLKLAIVGRPNVGKSTLTNRILGEDRVVVFDMPGTTRDSVYIPMERDGR 239

Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
           +Y+LIDTAG+RRR +  E IEK+SV+KTL++I +ANVV+ ++DA++ IS QD+N+  F  
Sbjct: 240 EYVLIDTAGVRRRGRIDEAIEKYSVVKTLQAIEDANVVLAVIDARETISDQDLNLIGFAL 299

Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
            +GRS+++ VNKWD +  + +  IK  + ++L F+ FA  +FISA+    +    ES+  
Sbjct: 300 NAGRSIVIAVNKWDGLQQDHKDEIKRELDRRLGFVDFARLHFISALHGTGVGHLFESVEE 359

Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
            Y S+   +STS++T+ +  A + H P      R KL+YAH GG NPP IVIHGN++  +
Sbjct: 360 AYKSATQRVSTSKLTKIMEMAQEEHQPPLVGGRRVKLKYAHAGGYNPPRIVIHGNQVTRL 419

Query: 411 GNDYKRYLEKYFYRTFSLI 429
              Y+RYL  YF +   ++
Sbjct: 420 PGSYQRYLTNYFRKALGVM 438


>gi|358635849|dbj|BAL23146.1| histidyl-tRNA synthetase [Azoarcus sp. KH32C]
          Length = 441

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/352 (51%), Positives = 255/352 (72%), Gaps = 7/352 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG++L+LRPEGTAS +R++I++NL++  P RL+Y GPMFRHE
Sbjct: 66   GEVTDIVEKEMYSFEDALNGEHLTLRPEGTASCVRAIIQHNLLHVAPLRLYYHGPMFRHE 125

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIG+EA+GF GPDIDAE I+MC+RLW++L L ++ LELNS+G+  ER  
Sbjct: 126  RPQKGRYRQFHQIGIEALGFDGPDIDAEHILMCARLWEDLGLDDVRLELNSLGSAEERAA 185

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y++ H+D     ED K  LY N LR+LD+KN  +++I+  APKL+DYL ++SL
Sbjct: 186  HRAALITYLEGHRDR--LDEDGKRRLYTNPLRILDTKNPELQDIVEAAPKLMDYLGEESL 243

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q +L    + Y+IN +LVRG+DYYNRTVFEW T +LG+Q ++C GGRYD L+++
Sbjct: 244  KHFDGVQTLLKDAGVHYRINHRLVRGLDYYNRTVFEWVTTRLGAQGTVCAGGRYDGLVEQ 303

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               +  PA+GFA+G+ERL+ L ++     + +   D+Y+VH G++A+  AF  +E LR  
Sbjct: 304  LGGRPAPAAGFAMGVERLLALWRESGAQVDAA-VPDVYVVHQGEQAQRLAFRAAEALREH 362

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            G  V+ +C       SFKSQMK+A+AS A  A +IGE+E  +  + +K LR 
Sbjct: 363  GFAVLTHCGGG----SFKSQMKKADASKAQLAVVIGEDEAASGEVGLKPLRG 410


>gi|88858476|ref|ZP_01133118.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2]
 gi|88820093|gb|EAR29906.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2]
          Length = 492

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/452 (45%), Positives = 287/452 (63%), Gaps = 24/452 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+    +  FI++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKYDEYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK--SGQPIVLVI 118
           +   ++GI  EM +Q+  AI E+D+++F+VD R G+   D+ I N LRK  + + I LV 
Sbjct: 61  DGS-EEGIELEMAEQSLLAIEEADVVMFLVDARAGMTAADQAIANHLRKLNTQKSIFLVA 119

Query: 119 NKSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI-------------ELP 164
           NK + +++  S  +FY+L +G  + I+A +G G+   LE  L               EL 
Sbjct: 120 NKIDGLDADSSCAEFYQLALGEVYQIAASHGRGVTQLLETALQPVIEEFNRLNGVEEELE 179

Query: 165 YKKFFKKKEFTNIHSIEY-------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
               F + E       EY       IK+AI+G+PNVGKSTL N +LGE RVI YD PGTT
Sbjct: 180 QINEFDEFEEGAEEPDEYQEFSDKPIKLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTT 239

Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
           RDSI      N+++Y+LIDTAG+R+R K  +V EKFSVIKTLK+I +ANVV+L++DA++ 
Sbjct: 240 RDSIYIPMTRNDQEYVLIDTAGVRKRKKVSDVAEKFSVIKTLKAIEDANVVLLVVDAREG 299

Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
           IS QD+++  F   SGRSL++ VNKWD +    +  IK  + ++L F+ FA  +FISA+ 
Sbjct: 300 ISDQDLSLLGFALNSGRSLVIAVNKWDGLDEYVKTRIKTELDRRLGFIDFARIHFISALH 359

Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
              +    ES++  Y S+   +ST+ + R +  A  +H P      R KL+YAH GG NP
Sbjct: 360 GTGVGHLFESVDEAYQSATKRISTAMLRRIMDMAQSDHQPPLVAGRRVKLKYAHAGGYNP 419

Query: 398 PIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           PIIVIHGN+L  + + YKRYL  Y+ ++  ++
Sbjct: 420 PIIVIHGNQLNDLPDSYKRYLMNYYRKSLKIM 451


>gi|294140150|ref|YP_003556128.1| GTP-binding protein EngA [Shewanella violacea DSS12]
 gi|293326619|dbj|BAJ01350.1| GTP-binding protein EngA [Shewanella violacea DSS12]
          Length = 490

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/454 (42%), Positives = 285/454 (62%), Gaps = 33/454 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRASLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI   M +Q+  AI E+D+++F+ D R GL   D  I + LR+  +   +V NK
Sbjct: 61  DG-TEEGIEVHMAEQSLAAIEEADVVLFLTDARAGLTAADHAIADHLRRRDKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  L    PY +            
Sbjct: 120 VDGIDADSACAEFWALGLGEVYQMAASQGRGVTNMIEYALA---PYAEALGLHRNDEGDI 176

Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
                         ++K   ++     IK+AI+GKPNVGKSTLIN +LGE RV+ YD+PG
Sbjct: 177 EVEEREYSEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLINRILGEERVVVYDSPG 232

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E   ++Y+LIDTAG+RRR+K  E +EKFSVIKTLK+I + NVV+L++DA+
Sbjct: 233 TTRDSIYIPMEREGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAIEDCNVVLLIIDAR 292

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + I+ QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA
Sbjct: 293 EGIAEQDLGLLGFALNAGRALVIAVNKWDGINQEIKDRVKSELDRRLGFIDFARIHFISA 352

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ES+   YDS+   +STS +TR +  A  +H P      R KL+YAH GG 
Sbjct: 353 LHGTGVGHLYESVEEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGY 412

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+V+HGN++K + + YKRY+  Y+ R+  ++
Sbjct: 413 NPPIVVVHGNQVKKLPDSYKRYMMNYYRRSLKVM 446


>gi|226939618|ref|YP_002794691.1| GTP-binding protein engA [Laribacter hongkongensis HLHK9]
 gi|226714544|gb|ACO73682.1| GTP-binding protein engA [Laribacter hongkongensis HLHK9]
          Length = 415

 Score =  386 bits (991), Expect = e-104,   Method: Composition-based stats.
 Identities = 188/383 (49%), Positives = 264/383 (68%), Gaps = 10/383 (2%)

Query: 47  IGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNF 106
           +G K ++++DTGGFEP V  GIMHEM +QT QA+ E+D +IF+VD R GL  QDK+I N 
Sbjct: 4   VGGKPYLVVDTGGFEPVVDSGIMHEMARQTLQAVDEADAVIFLVDARAGLTPQDKIIANQ 63

Query: 107 LRKSGQPIVLVINKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY 165
           LR+ G+P+ LV+NK+E ++ ++ + +FYELG+  P  IS  +G G++  ++ +L    P+
Sbjct: 64  LRQIGRPVFLVVNKAEGMSRAMVVAEFYELGLDEPWSISGAHGEGVRELMDEVLA---PF 120

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
               + +E T+ H     K AI+G+PNVGKSTL+N++LGE RVI +D PGTTRDSI   F
Sbjct: 121 PD--ESEEETSRHP----KFAIIGRPNVGKSTLVNAILGEERVIAFDHPGTTRDSIYIDF 174

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E   K Y +IDTAG+RRR K  E IEKFSV+KTL++I +ANV +L+LDA  ++S QD  +
Sbjct: 175 EREGKTYTIIDTAGVRRRAKIDESIEKFSVVKTLQAIEDANVCVLVLDAALDVSDQDATL 234

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
           A F  E+GR+L+V VNKWD     QR  IK +I +KL+FL FA +++ISA+K   +    
Sbjct: 235 AGFALEAGRALVVAVNKWDDCDEEQRINIKRSIARKLHFLEFAKYHYISALKGQGVADLF 294

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +SI+  Y +++I + T ++TRAL  AI+   P    LIRPK+RYAHQGG NPP++V+HGN
Sbjct: 295 KSIDQAYHAAMIKMPTPKLTRALQVAIERQAPPMMGLIRPKMRYAHQGGMNPPVVVVHGN 354

Query: 406 RLKYIGNDYKRYLEKYFYRTFSL 428
            L  + + Y RYLE  F R F L
Sbjct: 355 ALDKLPDSYTRYLEHSFRRMFKL 377



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 10/166 (6%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           P   ++GRPNVGKSTL N +      +  ++PG TRD  Y +     K++ IIDT G   
Sbjct: 132 PKFAIIGRPNVGKSTLVNAILGEERVIAFDHPGTTRDSIYIDFEREGKTYTIIDTAGVRR 191

Query: 63  EVK--KGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             K  + I      +T QAI ++++ + ++D    + +QD  +  F  ++G+ +V+ +NK
Sbjct: 192 RAKIDESIEKFSVVKTLQAIEDANVCVLVLDAALDVSDQDATLAGFALEAGRALVVAVNK 251

Query: 121 SE--------NINSSISLDFYELGIGNPHIISALYGNGIKNFLENI 158
            +        NI  SI+   + L     H ISAL G G+ +  ++I
Sbjct: 252 WDDCDEEQRINIKRSIARKLHFLEFAKYHYISALKGQGVADLFKSI 297


>gi|153001514|ref|YP_001367195.1| GTP-binding protein EngA [Shewanella baltica OS185]
 gi|160876250|ref|YP_001555566.1| GTP-binding protein EngA [Shewanella baltica OS195]
 gi|217972557|ref|YP_002357308.1| GTP-binding protein EngA [Shewanella baltica OS223]
 gi|373950336|ref|ZP_09610297.1| GTP-binding protein engA [Shewanella baltica OS183]
 gi|378709450|ref|YP_005274344.1| ribosome-associated GTPase EngA [Shewanella baltica OS678]
 gi|386323825|ref|YP_006019942.1| GTP-binding protein engA [Shewanella baltica BA175]
 gi|418023996|ref|ZP_12662980.1| GTP-binding protein engA [Shewanella baltica OS625]
 gi|166225855|sp|A6WQP3.1|DER_SHEB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|189037160|sp|A9KWW9.1|DER_SHEB9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|254783166|sp|B8E9T1.1|DER_SHEB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|151366132|gb|ABS09132.1| small GTP-binding protein [Shewanella baltica OS185]
 gi|160861772|gb|ABX50306.1| small GTP-binding protein [Shewanella baltica OS195]
 gi|217497692|gb|ACK45885.1| small GTP-binding protein [Shewanella baltica OS223]
 gi|315268439|gb|ADT95292.1| ribosome-associated GTPase EngA [Shewanella baltica OS678]
 gi|333817970|gb|AEG10636.1| GTP-binding protein engA [Shewanella baltica BA175]
 gi|353536869|gb|EHC06427.1| GTP-binding protein engA [Shewanella baltica OS625]
 gi|373886936|gb|EHQ15828.1| GTP-binding protein engA [Shewanella baltica OS183]
          Length = 488

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/453 (43%), Positives = 285/453 (62%), Gaps = 32/453 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +            
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIVRQGEDEV 176

Query: 170 -------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
                        ++K   ++     IK+AI+GKPNVGKSTL N +LGE RV+ +D PGT
Sbjct: 177 TEEREYTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVFDEPGT 232

Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
           TRDSI    E   ++Y++IDTAG+RRR+K  +VIEKFSVIKTLK++ +ANVV+L++DA++
Sbjct: 233 TRDSIYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDARE 292

Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
            I+ QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+
Sbjct: 293 GIAEQDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISAL 352

Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
               +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG N
Sbjct: 353 HGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYN 412

Query: 397 PPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           PPI+VIHGN++  + + YKRY+  YF R+  ++
Sbjct: 413 PPIVVIHGNQVSRLPDSYKRYMMNYFRRSLKVV 445


>gi|317490873|ref|ZP_07949309.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|365836063|ref|ZP_09377470.1| ribosome biogenesis GTPase Der [Hafnia alvei ATCC 51873]
 gi|316920420|gb|EFV41743.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|364564874|gb|EHM42617.1| ribosome biogenesis GTPase Der [Hafnia alvei ATCC 51873]
          Length = 495

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/455 (43%), Positives = 288/455 (63%), Gaps = 27/455 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG   +    FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVSGHEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M +Q+  AI E+DI++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTENGVETHMAEQSLMAIEEADIVLFMVDARAGLMPADEGIAQHLRSREKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
           ++ I+  +++ DFY LG G  + I+A +G G+   +E  L   + +P  +    +E  N 
Sbjct: 120 TDGIDPDVAIGDFYSLGFGEVYPIAASHGRGVAQLIEEALIPFVGVPEPERELTEEEANA 179

Query: 178 HSIEY-----------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
                                       IK+AIVG+PNVGKSTL N +LGE+RV+ YD P
Sbjct: 180 AYWAEQEADEAEELAEEEEDDFNPQDLPIKIAIVGRPNVGKSTLTNRILGEDRVVVYDMP 239

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI      + ++Y+LIDTAG+R+R K  + +EKFSVIKTL++I ++NV +L++DA
Sbjct: 240 GTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTDTVEKFSVIKTLQAIEDSNVALLVIDA 299

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++ IS QD+++  FI  SGRSL++ VNKWD +  + +  +K  +  +L F+ FA  +FIS
Sbjct: 300 REGISDQDLSLLGFILNSGRSLVIVVNKWDGLSEDVKTQVKEMLDLRLGFVDFARIHFIS 359

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+  + + +  ESI   YD +   +STS +TR +  A ++H P   +  R KL+YAH GG
Sbjct: 360 ALHGSGVGNLFESIQEAYDCATRRVSTSLLTRIMNMAQEDHQPPLVRGRRVKLKYAHAGG 419

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+VIHGN++K + + YKRYL  YF R+  ++
Sbjct: 420 YNPPIVVIHGNQVKDLADSYKRYLMNYFRRSLKVM 454


>gi|119775495|ref|YP_928235.1| GTP-binding protein EngA [Shewanella amazonensis SB2B]
 gi|166225853|sp|A1S859.1|DER_SHEAM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|119767995|gb|ABM00566.1| small GTP-binding protein domain [Shewanella amazonensis SB2B]
          Length = 488

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/448 (43%), Positives = 283/448 (63%), Gaps = 21/448 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA+YPGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLE------------------NILTI 161
            + I++ S   +F++LG+G  + ++A  G G+   +E                   ++T 
Sbjct: 120 VDGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALAPFAEAMGLVRDDDGEVVTD 179

Query: 162 ELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
           E  Y +   + E   +   + IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS+
Sbjct: 180 ERNYTEEEAEAEQQRLAE-QPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSV 238

Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
               E + + Y+LIDTAG+RRR +  EVIEKFSVIKTLK++ ++NVV+L++DA + I+ Q
Sbjct: 239 YIPMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQ 298

Query: 282 DINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNI 341
           D+ +  F+  SGR+L++ VNKWD +  + +  +K  + ++L F+ FA  +FISA+    +
Sbjct: 299 DLGLLGFVLNSGRALVLAVNKWDGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGV 358

Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
               ESI   YDS+   +STS +TR +  A  +H P      R KL+YAH GG NPPI+V
Sbjct: 359 GHLFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHVGGYNPPIVV 418

Query: 402 IHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +HGN++  + + YKRY+  Y+ R   ++
Sbjct: 419 VHGNQVSRLPDSYKRYMMNYYRRALKVV 446


>gi|90579361|ref|ZP_01235171.1| GTP-binding protein EngA [Photobacterium angustum S14]
 gi|90440194|gb|EAS65375.1| GTP-binding protein EngA [Photobacterium angustum S14]
          Length = 500

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/459 (42%), Positives = 289/459 (62%), Gaps = 31/459 (6%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   + +  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR   +P  LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSREKPTFLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT----------IELPYKKFF 169
            + I++ S   +F+ LG+   + I+A    G+   +E  L            E   ++  
Sbjct: 120 VDGIDADSACAEFWRLGVDAMYQIAATQNRGVTALMERALAPFSDKLNAELAENGEEQEV 179

Query: 170 KKKEFTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVIT 210
             ++ T++  IE                    IK+AI+G+PNVGKSTL N +LGE RV+ 
Sbjct: 180 SIEDLTSVEDIEKANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVV 239

Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
           YD PGTTRDSI    E + ++Y+LIDTAGIRRR    + +EKFSVI+TLK++ +ANVV+L
Sbjct: 240 YDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHQAVEKFSVIQTLKAVEDANVVLL 299

Query: 271 LLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMF 330
           ++DA++NIS QD+++  F   +GRSL++ VNKWD + +  ++ +K+ + ++L F+ FA  
Sbjct: 300 VIDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARI 359

Query: 331 NFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYA 390
           +FISA+    +    ES+   Y S+   +STS +TR +  A  +H P   +  R KL+YA
Sbjct: 360 HFISALHGTGVGHLYESVIEAYQSATKRISTSLLTRIMQMAQDDHQPPMIRGRRVKLKYA 419

Query: 391 HQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           H GG NPPIIV+HGN++  +   YKRYL  Y+ ++  ++
Sbjct: 420 HAGGYNPPIIVVHGNQVNDLPGSYKRYLMNYYRKSLEMM 458


>gi|359787056|ref|ZP_09290127.1| GTP-binding protein EngA [Halomonas sp. GFAJ-1]
 gi|359295706|gb|EHK59969.1| GTP-binding protein EngA [Halomonas sp. GFAJ-1]
          Length = 467

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/429 (43%), Positives = 280/429 (65%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G KS+ +IDTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGGKSYTVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AI E+DI++F+VD R GL   D+ I N LR + +   LV+NK
Sbjct: 61  SGD-EEGIDAAMAEQSLAAIDEADIVLFLVDARAGLNVADEAIANHLRVNQKKTWLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +   S   DF++LG+G+P  I+A +G  +   ++ +L    P+ +  +         
Sbjct: 120 TDGLEEHSAMADFWKLGLGDPWPIAAAHGRNVSLLIDTVLE---PFPE--RDASIPADTG 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I++ ++G+PNVGKSTL+N LLGE RV+ +D  GTTRD+I+  FE N K Y+LIDTAG
Sbjct: 175 SKGIRIGVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERNGKPYVLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR    E+ EKFS+IKTL +I E +V +++LDA+  +  QD+++ +++  +GR+L++ 
Sbjct: 235 IRRRKNVREIAEKFSIIKTLDAIKECHVAVMVLDARSGLVEQDMHLLDYVLTTGRALVLA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + ++ ++  IK++L F  +A  +FISA+    +     SI   ++++  H 
Sbjct: 295 INKWDGLESDAKEKMRAEIKRRLGFADYAEIHFISALHGTAVGDLYPSIERAFNAANAHW 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+T  L  A+  HPP      R KLR AHQGG NPPIIV+HGN+   +   Y+RYL 
Sbjct: 355 STNRLTTLLQDAVSQHPPPMVNGRRIKLRMAHQGGSNPPIIVVHGNQTASLPEAYRRYLT 414

Query: 420 KYFYRTFSL 428
             F +   +
Sbjct: 415 NTFRKVLKV 423


>gi|92114975|ref|YP_574903.1| small GTP-binding protein [Chromohalobacter salexigens DSM 3043]
 gi|123387342|sp|Q1QTK4.1|DER_CHRSD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|91798065|gb|ABE60204.1| Small GTP-binding protein protein [Chromohalobacter salexigens DSM
           3043]
          Length = 467

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/429 (44%), Positives = 276/429 (64%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G +G K++ +IDTGG 
Sbjct: 1   MNPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGNGVLGDKTYTVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
               ++G+   M +Q+  AI E+DI++F+VDGR GL   D+ I N LR + +   LV+NK
Sbjct: 61  SGN-EEGLDAAMAEQSLLAIDEADIVLFMVDGRTGLNVADEAIANHLRVNQKKTWLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +   S   +F+ LG+G+P  I+A +G  + + ++ +L    P +      + +N   
Sbjct: 120 TDGLEEHSAMAEFWRLGLGDPRPIAAAHGRNVTSLIDEVLAPFPPREANAAPPDLSN--- 176

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++ ++G+PNVGKSTL+N LLGE+RV+ YD  GTTRD+I+  FE   K Y+L+DTAG
Sbjct: 177 --GIRIGVIGRPNVGKSTLVNRLLGEDRVVVYDEAGTTRDAIEIPFERRGKPYVLVDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR    E  EKFS+IKTL++I   NV I++LDA+  +  QD+++ +++  SGR+L++ 
Sbjct: 235 VRRRKNVSEAAEKFSIIKTLEAIKACNVAIMVLDARSGLVEQDLHLLDYVLSSGRALVLA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    +  ++  IK++L F  +A  +FISA+    +     SI   +DS+  H 
Sbjct: 295 VNKWDGLEQEAKDKMRAAIKRRLGFADYAEMHFISALHGTAVGDLYPSITRAFDSANSHW 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+T  L  A+  H P      R KLR AHQGG NPPIIV+HGN+   +   YKRYL 
Sbjct: 355 STNRLTTILQDAVSEHQPPLIHGRRIKLRMAHQGGSNPPIIVVHGNQTGSLPEAYKRYLT 414

Query: 420 KYFYRTFSL 428
             F +   +
Sbjct: 415 NTFRKVLKV 423


>gi|126175188|ref|YP_001051337.1| GTP-binding protein EngA [Shewanella baltica OS155]
 gi|386341941|ref|YP_006038307.1| ribosome-associated GTPase EngA [Shewanella baltica OS117]
 gi|166225854|sp|A3D6V5.1|DER_SHEB5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|125998393|gb|ABN62468.1| small GTP-binding protein [Shewanella baltica OS155]
 gi|334864342|gb|AEH14813.1| ribosome-associated GTPase EngA [Shewanella baltica OS117]
          Length = 488

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/453 (43%), Positives = 285/453 (62%), Gaps = 32/453 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  +M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  LT   PY +            
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIVRQGEDEV 176

Query: 170 -------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
                        ++K   ++     IK+AI+GKPNVGKSTL N +LGE RV+ +D PGT
Sbjct: 177 TEEREYTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVFDEPGT 232

Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
           TRDSI    E   ++Y++IDTAG+RRR+K  +VIEKFSVIKTLK++ +ANVV+L++DA++
Sbjct: 233 TRDSIYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDARE 292

Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
            I+ QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA+
Sbjct: 293 GIAEQDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISAL 352

Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
               +    ESI   YDS+   +STS +TR +  +  +H P      R KL+YAH GG N
Sbjct: 353 HGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYN 412

Query: 397 PPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           PPI+VIHGN++  + + YKRY+  YF R+  ++
Sbjct: 413 PPIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVV 445


>gi|254786612|ref|YP_003074041.1| GTP-binding protein EngA [Teredinibacter turnerae T7901]
 gi|259645886|sp|C5BLV6.1|DER_TERTT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|237684664|gb|ACR11928.1| GTP-binding protein EngA [Teredinibacter turnerae T7901]
          Length = 464

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/429 (45%), Positives = 273/429 (63%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P + LVGRPNVGKSTLFNRLT +RDA+VAN+ GLTRDR YG+     K FI++DTGG 
Sbjct: 1   MIPTIALVGRPNVGKSTLFNRLTKTRDAIVANFAGLTRDRKYGDAEFEGKRFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+ QAI ESDII+F+VD R GL   D  I   LR   +P  LV NK
Sbjct: 61  SGD-EEGIDSVMAEQSLQAIAESDIILFLVDCRDGLTHVDSQIAQHLRTLHKPTFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +  N  +++  F+ELG+G  H ++A +G G+   +  +L           + E     +
Sbjct: 120 VDGQNHDLAIAPFFELGLGEVHSVAAAHGRGVNTLMATVLA------DIAVESEADEADA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +K+AI+G+PNVGKSTL+N +LGE RV+ +D PGTTRDSI   +E + K Y LIDTAG
Sbjct: 174 ERRLKMAIIGRPNVGKSTLVNRMLGEERVVVFDMPGTTRDSIYIDYERDEKHYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR      +EKFS+IKTL++I +ANVVIL++DA + I  QD+++     ESGR+L+V 
Sbjct: 234 VRRRKNVKLTVEKFSIIKTLQAINDANVVILVMDASEGIVDQDLHLLGHAIESGRALVVA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + +  +K  ++++L+F+ +A  +FISA+    + +  +S+   Y ++    
Sbjct: 294 LNKWDGLEDDHKSYVKTELQRRLSFVDYADLHFISALHGTGVGNLYKSVEKAYQAATEKY 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           STS +TR L  A+  H P   +  R KLRYAH GG NPPIIVIHG +   + N Y RYLE
Sbjct: 354 STSFLTRILEDAVTAHQPPLVRGRRIKLRYAHAGGHNPPIIVIHGTQTSEVPNHYTRYLE 413

Query: 420 KYFYRTFSL 428
           K + R   L
Sbjct: 414 KVYRRALEL 422


>gi|442610720|ref|ZP_21025430.1| GTP-binding protein EngA [Pseudoalteromonas luteoviolacea B = ATCC
           29581]
 gi|441747749|emb|CCQ11492.1| GTP-binding protein EngA [Pseudoalteromonas luteoviolacea B = ATCC
           29581]
          Length = 490

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/450 (43%), Positives = 293/450 (65%), Gaps = 22/450 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGFEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  EM +Q+  AI E+DI++F+VD R GL   D+ I   LRK  +   +V NK
Sbjct: 61  DGS-EEGIETEMAQQSLLAIEEADIVLFLVDARAGLTSADQGIAQHLRKQQKKSFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-------TIELPYKKFFKKK 172
           ++ I++ S   +FY+L +G+   I+A +G G+   LE+ L         E+  ++ + ++
Sbjct: 120 TDGIDADSAVAEFYQLALGDVLQIAAAHGRGVTQLLEHTLRPLLGDLQEEIASEEEYGEE 179

Query: 173 EFT-------------NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
            F               I++ + +K+AI+G+PNVGKSTL N +LGE RVI YD PGTTRD
Sbjct: 180 AFAAFDEEHVEGEDVEQINADKPVKLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTTRD 239

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI      N+++YILIDTAG+R+R K  +V+EKFSVIKTL++I +ANV++L++DA++ IS
Sbjct: 240 SIYIPMTRNDREYILIDTAGVRKRKKVSDVVEKFSVIKTLQAIEDANVILLVIDAREGIS 299

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+++  F   +GRSL++ VNKWD +    ++ IK+ + ++L F+ FA  +FISA+   
Sbjct: 300 DQDLSLLGFALNAGRSLVIAVNKWDGLDEYVKERIKSELDRRLGFIDFARIHFISALHGT 359

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            +    ES++  YDS+   +ST+ + R +  A  +H P   +  R KL+YAH GG NPP 
Sbjct: 360 GVGHLFESVDEAYDSATRRVSTAMLRRIMDMAQADHQPPMVRGRRVKLKYAHAGGYNPPR 419

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            VIHGN++  + + YKRYL  Y+ +  +++
Sbjct: 420 FVIHGNQVDDLPDSYKRYLMNYYRKALNIM 449


>gi|359393973|ref|ZP_09187026.1| GTPase Der [Halomonas boliviensis LC1]
 gi|357971220|gb|EHJ93665.1| GTPase Der [Halomonas boliviensis LC1]
          Length = 467

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/429 (43%), Positives = 279/429 (65%), Gaps = 7/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K + +IDTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGDKVYTVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI   M +Q+  AI E+DI++F+VD R GL+  D+ I N LR + +   LV+NK
Sbjct: 61  SGD-EDGIDAAMAEQSLAAIDEADIVLFMVDARAGLIAADQAIANHLRVNQKKTWLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ +    ++ DF+ LG+G+P  I+A +G  +   ++ +L    P+ +  +         
Sbjct: 120 TDGLEEHSAMGDFWSLGLGDPWPIAAAHGRNVSTLIDVVLE---PFPE--RDASIPADTG 174

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + ++++++G+PNVGKSTL+N LLGE RV+ +D  GTTRD+I+  FE   K Y+LIDTAG
Sbjct: 175 SKGVRISVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERRGKPYVLIDTAG 234

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR    EV EKFS+IKTL +I E++VVI++LD    +  QD+++ +++  +GR+L++ 
Sbjct: 235 IRRRKNIREVTEKFSIIKTLDAIKESHVVIMVLDGSSGLVEQDLHLLDYVLTTGRALVLA 294

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    +  ++  +K++L F  +A  +FISA+    +     SI+  +D++  H 
Sbjct: 295 VNKWDGLETEAKDKMRTEVKRRLGFADYAELHFISALHGTAVGDLYPSIDRAFDAANAHW 354

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+R+T  L  A+  +PP      R KLR AHQGG NPPIIV+HGN+ + +   Y+RYL 
Sbjct: 355 STNRLTTLLQDAVSQNPPPMVHGRRIKLRMAHQGGSNPPIIVVHGNQTESLPEAYRRYLT 414

Query: 420 KYFYRTFSL 428
             F +   +
Sbjct: 415 NTFRKVLKV 423


>gi|262374928|ref|ZP_06068162.1| ribosome-associated GTPase EngA [Acinetobacter lwoffii SH145]
 gi|262309941|gb|EEY91070.1| ribosome-associated GTPase EngA [Acinetobacter lwoffii SH145]
 gi|407009093|gb|EKE24308.1| hypothetical protein ACD_6C00164G0010 [uncultured bacterium]
          Length = 469

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/429 (44%), Positives = 291/429 (67%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAIHEADIIIFVVDARAGLLASDEQIARELRTLGKKVFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L  ++P  +  ++ +      
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLA-DVPEDENPEEHDKNT--- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K  E+IEKFS++KTL+++ +ANV+++++DA+  I  QD+++  +  E+GR++++ 
Sbjct: 234 VRRKGKVDEMIEKFSIVKTLQAMKDANVIVVVVDARDGIVEQDLHLIGYALEAGRAMVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  YDSS + +
Sbjct: 294 VNKWDNMTEYDRKQCKLDVERRFDFIPWAKVHLISALHGTGVGDLYPSIHRAYDSSRLKV 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S ++IT+ L  A   H P   +  R K+RYAH GG+NPP IVIHGN++     DY+RYLE
Sbjct: 354 SPAKITQILNDATDAHQPPMVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413

Query: 420 KYFYRTFSL 428
             F + + L
Sbjct: 414 NVFRKVYKL 422


>gi|157371840|ref|YP_001479829.1| GTP-binding protein EngA [Serratia proteamaculans 568]
 gi|166920103|sp|A8GHW1.1|DER_SERP5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|157323604|gb|ABV42701.1| small GTP-binding protein [Serratia proteamaculans 568]
          Length = 494

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/455 (43%), Positives = 288/455 (63%), Gaps = 27/455 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG   +    FII+DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVEGNEFIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M  Q+  AI E+DI++F+VD R GL+  D  I   LR   +   LV NK
Sbjct: 61  D-GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADLGIAQHLRNRQKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI---ELPY----------K 166
           ++ ++  ++  DFY LG+G+ H I+A +G G+   +E++L     E P            
Sbjct: 120 TDGMDPDMAAADFYSLGLGDVHPIAASHGRGVAQLIEHVLVPFVGEKPEEVELTEEEANA 179

Query: 167 KFFKKKEFTNIHSIEY------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
            ++ ++E   +   E             IK+AIVG+PNVGKSTL N +LGE+RV+ YD P
Sbjct: 180 AYWAEQEGETLEGAEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMP 239

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI      + ++Y+LIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++DA
Sbjct: 240 GTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVVDA 299

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++ IS QD+++  FI  SGRSL++ VNKWD +    R  +K  +  +L F+ FA  +FIS
Sbjct: 300 REGISDQDLSLLGFILNSGRSLVIVVNKWDGMSEEDRDHVKEMLDLRLGFVDFARIHFIS 359

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+  + + +   S+   Y+ +   ++TS +T+ +  A  +H P   +  R KL+YAH GG
Sbjct: 360 ALHGSGVGNLFVSVLEAYECATRRVNTSMLTKIMQMAADDHQPPLVRGRRVKLKYAHAGG 419

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
            NPPI+VIHGN++  + + YKRYL  YF R+  ++
Sbjct: 420 YNPPIVVIHGNQVTDLSDSYKRYLMNYFRRSLKVM 454


>gi|383758612|ref|YP_005437597.1| ribosomal RNA large subunit methyltransferase N [Rubrivivax
           gelatinosus IL144]
 gi|381379281|dbj|BAL96098.1| ribosomal RNA large subunit methyltransferase N [Rubrivivax
           gelatinosus IL144]
          Length = 372

 Score =  385 bits (988), Expect = e-103,   Method: Composition-based stats.
 Identities = 183/338 (54%), Positives = 242/338 (71%), Gaps = 10/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF+KM+DL+ SLR KL  +  +++  ++S+ +S DGT K
Sbjct: 20  LGEKRFRAVQLFRWIHQKGESDFDKMSDLAKSLRGKLAGAAVVESLPVISEHVSADGTTK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +ETV+IPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEII QL 
Sbjct: 80  WLFDVGGGNAVETVYIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEIIAQLR 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E +LR          G+R I N+VMMGMGEPL NY + + AL+++L DH YGLSRR V
Sbjct: 140 YAEHRLR-------GPDGQRVIDNVVMMGMGEPLQNYTAVVPALRVMLDDHGYGLSRRRV 192

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++ MID+L ++CPV LAVSLHA N+ LR+ LVPI++K  ++ L+ AC RY+  +
Sbjct: 193 TVSTSGMVAMIDRLREDCPVALAVSLHAPNDALRDALVPINRKDGIEALLDACLRYVEAA 252

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND    A+EL+ L+R+ ++   CK NLIPFN FP S L  S   R
Sbjct: 253 PRDFITFEYCMLDGVNDAPEQALELVHLVRRRRV--PCKFNLIPFNPFPESGLKRSPRER 310

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +  FAK+L ++GI  TIRK+RG+DI+AACGQL+GE  D
Sbjct: 311 VTAFAKVLQDAGIVTTIRKVRGDDIDAACGQLAGEVQD 348


>gi|37525336|ref|NP_928680.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|41017002|sp|Q7N702.1|DER_PHOLL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|36784763|emb|CAE13673.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 493

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/457 (43%), Positives = 291/457 (63%), Gaps = 32/457 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +  + FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M  Q+  AI E+DI++F+VD R GL+  D  I   LR   +   LV NK
Sbjct: 61  D-GTEDGVETHMAAQSLLAIEEADIVLFMVDARAGLMPADHAIAKHLRGREKATFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYK------------- 166
           ++ ++   ++ +FY LG+G+ + I+A +G G+   +E +L   LP+              
Sbjct: 120 TDGVDIDTAIAEFYSLGLGDIYSIAASHGRGVTQLIERVL---LPFSGKGEEEVVELTEE 176

Query: 167 ----KFFKKKEFTNIH----------SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
                ++ ++E   I           S   +K+AIVGKPNVGKSTL N +LGE RV+ YD
Sbjct: 177 EANAAYWAEQEQNEIEMVEEEEDFDPSTLPLKLAIVGKPNVGKSTLTNRILGEERVVVYD 236

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI    E + ++YILIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMERDGREYILIDTAGVRKRGKITETVEKFSVIKTLQAIEDANVVLLVI 296

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA++ IS QD+++  FI  SGRSL++ VNKWD +    ++ +K  +  +L F+ FA  +F
Sbjct: 297 DAREGISDQDLSLLGFILNSGRSLVIAVNKWDGMSQEDKERVKEMLDYRLGFVDFARVHF 356

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+  + + +  +SI   YD +   ++TS +TR +  A ++H P   +  R K++YAH 
Sbjct: 357 ISALHGSGVGNLFDSILEAYDCATRRVNTSLLTRIMHMAEEDHQPPMIRGRRVKMKYAHA 416

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPPI+VIHGN++  + + YKRYL  YF R+  ++
Sbjct: 417 GGYNPPIVVIHGNQVTDLPDSYKRYLMNYFRRSLKVM 453


>gi|119897219|ref|YP_932432.1| histidyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|254782319|sp|A1K3Z0.1|SYH_AZOSB RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|119669632|emb|CAL93545.1| Histidine--tRNA ligase [Azoarcus sp. BH72]
          Length = 433

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/353 (50%), Positives = 246/353 (69%), Gaps = 8/353 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYD-GPKRLWYSGPMFRH 926
            GE TDIV+KEMYSF D LNG++L+LRPEGTAS +R+ I++NL+   GP+RL+Y GPMFRH
Sbjct: 57   GEVTDIVEKEMYSFEDALNGEHLTLRPEGTASCVRAAIQHNLVAGHGPQRLYYHGPMFRH 116

Query: 927  ERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERK 986
            ERPQ GRYRQF+QIGVEA+GF GPDIDAE IIMC+RLW +L L+++ LE+NS+G   ER 
Sbjct: 117  ERPQKGRYRQFHQIGVEALGFAGPDIDAEHIIMCARLWDDLGLEDVSLEINSLGAAEERA 176

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
            ++   LI Y+++H+D     ED +  LY N LR+LD+KN  ++ ++  AP+L DYL  +S
Sbjct: 177  QHRAALIAYLEQHRDK--LDEDGQRRLYTNPLRILDTKNPDLQPVVEAAPRLADYLGDES 234

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
              HF  +Q  L    I Y+IN +LVRG+DYYNRTVFEW T +LG+Q ++C GGRYD L+ 
Sbjct: 235  RAHFDAVQLFLKDAGIPYRINHRLVRGLDYYNRTVFEWVTTRLGAQGTVCAGGRYDGLVA 294

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  PA+GFA+G+ERL+ L ++           D+Y+VH+G+ A+  AF  +E LR 
Sbjct: 295  QLGGKPQPAAGFAMGVERLLALWQESG-GEPERQAPDVYVVHLGEAAQRLAFQAAEALRG 353

Query: 1167 LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
             G   +L+C       SFKSQMK+A+ S A+ A +IGE+E     + +K LR 
Sbjct: 354  HGFSAVLHCGGG----SFKSQMKKADGSGASIAVVIGEDEAAAGEVGVKPLRG 402


>gi|421863302|ref|ZP_16295001.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309379239|emb|CBX22196.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 364

 Score =  384 bits (987), Expect = e-103,   Method: Composition-based stats.
 Identities = 182/344 (52%), Positives = 239/344 (69%), Gaps = 11/344 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ++GE PFRAKQ+ +WIH+ G  +F++MTDL+ SLR KL     I  P +M  Q S DGTR
Sbjct: 19  DMGEKPFRAKQVMRWIHQSGAQNFDEMTDLAKSLRHKLNEQANIGIPKLMMSQESSDGTR 78

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  V   N +ETVFIPE  R TLCIS+QVGCA+ C FCSTGRQGF RNLT  EIIGQL
Sbjct: 79  KWLLDVGTGNGVETVFIPESERGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQL 138

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W         K + +  + +R I+N+VMMGMGEP+ N+ + + AL ++L D+ YGLSRR 
Sbjct: 139 WWAN------KAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDYGYGLSRRR 192

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           V +STSG++  +D+L    PV LAVSLHASN+ +R+++VP++KKYPLKEL+ AC RY+  
Sbjct: 193 VTVSTSGMVSQMDRLRDVMPVALAVSLHASNDEVRDQIVPLNKKYPLKELMAACRRYLVK 252

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
           +PR  ITFEY ML G+ND   HA ELI+L++       CK NLIPFN FPNS    S   
Sbjct: 253 APRDFITFEYVMLDGVNDKAQHAHELINLVKD----VPCKFNLIPFNPFPNSGYERSSKE 308

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
            I++F  IL  +G  VT+RK RG+DI+AACGQL+G+  D  +++
Sbjct: 309 NIRVFKDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQ 352


>gi|422013656|ref|ZP_16360275.1| GTP-binding protein Der [Providencia burhodogranariea DSM 19968]
 gi|414102694|gb|EKT64285.1| GTP-binding protein Der [Providencia burhodogranariea DSM 19968]
          Length = 490

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/452 (43%), Positives = 289/452 (63%), Gaps = 24/452 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   I    FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGHEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M  Q+ QAI E+D+++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ I+++  + DFY LG+G  + I+A +G G+   +E+ L   +  +    +      ++
Sbjct: 120 TDGIDANTVIGDFYALGLGEIYSIAASHGRGVSQLIEHSLKPFIETEDEEIELTEEEENA 179

Query: 180 IEY----------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
             +                      IK+AIVG+PNVGKSTL N +LGE RVI +D PGTT
Sbjct: 180 AYWAAQEAENEFVEEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEERVIVFDMPGTT 239

Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
           RDSI    E + ++YILIDTAG+R+R K  E +EKFSVIKTLK+I +ANVV+L++DA++ 
Sbjct: 240 RDSIYIPMERDEREYILIDTAGVRKRGKVTETVEKFSVIKTLKAIEDANVVLLVIDAREG 299

Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
           IS QD+++  FI  +GRSL++ VNKWD +    R+ +K+ ++ +L F+ FA  +FISA+ 
Sbjct: 300 ISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFISALH 359

Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
            + + +  +S+   Y+S+   + T+ +TR +  A   H P   +  R K++YAH GG NP
Sbjct: 360 GSGVGNLFDSVQEAYESATRRVGTAMLTRIMKMAEDEHQPPLIRGRRVKMKYAHAGGHNP 419

Query: 398 PIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           PI+VIHGN++  + + YKRYL  YF R+  ++
Sbjct: 420 PIVVIHGNQVSDLPDSYKRYLMNYFRRSLKVM 451


>gi|226741196|sp|B8CKR5.1|DER_SHEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|212555787|gb|ACJ28241.1| GTP-binding protein EngA [Shewanella piezotolerans WP3]
          Length = 490

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/454 (42%), Positives = 282/454 (62%), Gaps = 33/454 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG  ++    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI   M +Q+  AI E+D+++F+ D R GL   D  I   LR   +   +V NK
Sbjct: 61  DG-TEEGIETRMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSREKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  L    PY +            
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA---PYAEAMGITKDGEGEE 176

Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
                         ++K   ++     IK+AI+GKPNVGKSTL N +LGE RV+ YD PG
Sbjct: 177 SEEEREYTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVYDEPG 232

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E   ++Y+LIDTAG+RRR+K  E +EKFSVIKTLK++ + NVV+L++DA+
Sbjct: 233 TTRDSIYIPMEREGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDCNVVLLIIDAR 292

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + I+ QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA
Sbjct: 293 EGIAEQDLGLLGFALNAGRALVIAVNKWDGIDQEVKDRVKSELDRRLGFIDFARIHFISA 352

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ESI   YDS+   +STS +TR +  A  +H P      R KL+YAH GG 
Sbjct: 353 LHGTGVGHLYESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGY 412

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+V+HGN++K + + YKR++  Y+ R+  +I
Sbjct: 413 NPPIVVVHGNQVKKLPDSYKRFMMNYYRRSLKVI 446


>gi|89072706|ref|ZP_01159271.1| GTP-binding protein EngA [Photobacterium sp. SKA34]
 gi|89051526|gb|EAR56980.1| GTP-binding protein EngA [Photobacterium sp. SKA34]
          Length = 500

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/462 (42%), Positives = 289/462 (62%), Gaps = 37/462 (8%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   + +  FI+IDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+  +M +Q+  AI E+D+++F+VDGR GL   D+ I   LR   +P  LV+NK
Sbjct: 61  DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSREKPTFLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+   + I+A    G+   +E  L    P+              
Sbjct: 120 VDGIDADSACAEFWRLGVDAMYQIAATQNRGVTALMERALA---PFSDKLNAELAEEGEE 176

Query: 170 ---KKKEFTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENR 207
              + ++ T++  IE                    IK+AI+G+PNVGKSTL N +LGE R
Sbjct: 177 QELQLEDLTSVEDIEKANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEER 236

Query: 208 VITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANV 267
           V+ YD PGTTRDSI    E + ++Y+LIDTAGIRRR    + +EKFSVI+TLK++ +ANV
Sbjct: 237 VVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHQAVEKFSVIQTLKAVEDANV 296

Query: 268 VILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSF 327
           V+L++DA++NIS QD+++  F   +GRSL++ VNKWD + +  ++ +K+ + ++L F+ F
Sbjct: 297 VLLIIDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDF 356

Query: 328 AMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKL 387
           A  +FISA+    +    ES+   Y S+   +STS +TR +  A  +H P   +  R KL
Sbjct: 357 ARIHFISALHGTGVGHLYESVIEAYQSATKRISTSLLTRIMQMAQDDHQPPMIRGRRVKL 416

Query: 388 RYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           +YAH GG NPPIIV+HGN++  +   YKRYL  Y+ ++  ++
Sbjct: 417 KYAHAGGYNPPIIVVHGNQVNDLPGSYKRYLMNYYRKSLEMM 458


>gi|407803605|ref|ZP_11150439.1| GTP-binding protein [Alcanivorax sp. W11-5]
 gi|407022449|gb|EKE34202.1| GTP-binding protein [Alcanivorax sp. W11-5]
          Length = 464

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/429 (43%), Positives = 279/429 (65%), Gaps = 6/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPVL LVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDR YG G    + +++IDTGG 
Sbjct: 1   MKPVLALVGRPNVGKSTLFNRLTRTRDALVADMPGLTRDRKYGLGRGADRPYVVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E  +G+    T+Q + A+ E+D ++F+VDGR GL   D+ +   +R   +P+ LV+NK
Sbjct: 61  G-EGLEGVAEPTTEQARLALAEADAVLFLVDGRAGLTVADQQLAQLMRTLNKPVHLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++   ++ +FY LG+G  H I+A++G G++  LEN+L    P       +E     +
Sbjct: 120 TDGLDEDSAMAEFYALGLGEVHAIAAVHGRGVRRMLENVLA-PFPLPPEVDAEEQA---A 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IKVA++G+PNVGKSTL+N LLGE RV+ YD  GTTRD+I+  +E + K+Y L+DTAG
Sbjct: 176 DSGIKVAVLGRPNVGKSTLVNRLLGEERVVVYDMAGTTRDTIEIPYERHGKRYTLLDTAG 235

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K FE +EKFSVIK +++I +A+VV++++DA++ ++ QD+++  +I E+GRS+++ 
Sbjct: 236 IRRRGKVFEAVEKFSVIKAMQAIDDAHVVVIVIDAREGLTEQDLHLLGYIIEAGRSVVMA 295

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    R+ +K  + ++L F  +   + ISA+    +      I   + S+   +
Sbjct: 296 VNKWDGLSVEHREQVKAELGRRLEFAPWMRVHTISALHGTGVGDLYPLIERAWASAFPKV 355

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ +T+ + + +  H P      R KLRYAH GG NPP I+IHG++   +   Y+RYLE
Sbjct: 356 STNSLTQMMEAIVARHQPPIVGRNRIKLRYAHIGGSNPPRIIIHGSKADSVPAGYRRYLE 415

Query: 420 KYFYRTFSL 428
             F     L
Sbjct: 416 NRFREQLKL 424


>gi|336317399|ref|ZP_08572255.1| ribosome-associated GTPase EngA [Rheinheimera sp. A13L]
 gi|335878332|gb|EGM76275.1| ribosome-associated GTPase EngA [Rheinheimera sp. A13L]
          Length = 490

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/457 (43%), Positives = 294/457 (64%), Gaps = 39/457 (8%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYG----EGYIGKKSFIIID 56
           M PV+ LVGR NVGKSTLFNRLT +RDALVA++PGLTRDR YG    EGY     FI++D
Sbjct: 1   MLPVVALVGRANVGKSTLFNRLTRTRDALVADFPGLTRDRKYGSVKYEGY----EFIVVD 56

Query: 57  TGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVL 116
           TGG +   ++GI  EM +Q+ +AI E+DI++F+VD R G    D  I   LR+  + + L
Sbjct: 57  TGGIDGN-EQGIEVEMAEQSLKAIDEADIVLFMVDARAGATVADDAIAQHLRRINKKVFL 115

Query: 117 VINKSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
           V NK++ +++ + + DFY L  G  + I+A++G G+ + L++ L   LP      +++  
Sbjct: 116 VANKTDGLDADTATADFYSLAQGEVYPIAAVHGRGVLSLLQHAL---LP---MLSEQQQQ 169

Query: 176 NIHSIE-----------------------YIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
            I +IE                       +IK+AIVG+PNVGKSTL N +LGE RV+ +D
Sbjct: 170 RIAAIEKGEELPEDFEEESEEDITQAKDQHIKLAIVGRPNVGKSTLTNRILGEERVVVFD 229

Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
            PGTTRDSI        ++Y LIDTAG+RRR K  +++EKFSVIKTL++I +ANVVIL+L
Sbjct: 230 MPGTTRDSIYIPMTRGEREYTLIDTAGVRRRGKIDDMVEKFSVIKTLQAIEDANVVILVL 289

Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
           DA+  IS QD++I  F+  +GRSL++ VNKWD +    ++ +K  + ++L F+ FA  +F
Sbjct: 290 DARLGISDQDLSILGFVLNAGRSLVLAVNKWDGLDERVKEDVKRELDRRLGFIDFARLHF 349

Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
           ISA+  + + +  ES+   +DS+   +ST+ +TR +  A+++H P   K  R KL+YAH 
Sbjct: 350 ISALHGSGVGNLFESVEEAFDSATRRVSTALLTRIMKMAVEDHQPPMVKGRRVKLKYAHA 409

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           GG NPP+IVIHG ++  + + YKRYL  YF ++  ++
Sbjct: 410 GGYNPPLIVIHGTQVDDLPDSYKRYLMNYFRKSLQMM 446


>gi|372489749|ref|YP_005029314.1| histidyl-tRNA synthetase [Dechlorosoma suillum PS]
 gi|359356302|gb|AEV27473.1| histidyl-tRNA synthetase [Dechlorosoma suillum PS]
          Length = 432

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/352 (51%), Positives = 247/352 (70%), Gaps = 7/352 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+NL+LRPEGTA  +R+VI+++L    P+RL+Y G MFRHE
Sbjct: 58   GEVTDIVEKEMYSFEDALNGENLTLRPEGTAGCVRAVIQHSLAAQHPRRLYYMGQMFRHE 117

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVE+ GF GPD+DAE I+M +RLW +L L+ I L++NS+G   ER +
Sbjct: 118  RPQRGRYRQFHQVGVESFGFAGPDVDAEQILMGARLWDDLGLEGITLQINSLGQPEERAR 177

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +  +LI Y + + D     ED +  L+ N LR+LD+KN  ++E+  NAPKL+D+L  +SL
Sbjct: 178  HRAELIAYFQANADR--LDEDSQRRLHTNPLRILDTKNPDMQELCANAPKLIDFLGAESL 235

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L      Y +N +LVRG+DYYN TVFEW TD+LG+Q ++C GGRYD L+++
Sbjct: 236  AHFEGVQQVLRDAGQPYTVNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCAGGRYDGLVEQ 295

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFA+G+ERLI LI+  ++  N     D+Y+VH G+ A   AF ++E LR  
Sbjct: 296  LGGKPTPACGFAMGVERLIALIQDQDLAGN-PEPVDVYVVHQGEAASRLAFRVAEGLRDN 354

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL V+LNC       SFKSQMK+A+ S A FA IIG++E     + +K LR+
Sbjct: 355  GLAVLLNCGGG----SFKSQMKKADGSGAAFAVIIGDDEAAAGEVSLKSLRS 402


>gi|262371080|ref|ZP_06064402.1| GTPase [Acinetobacter johnsonii SH046]
 gi|262313966|gb|EEY95011.1| GTPase [Acinetobacter johnsonii SH046]
          Length = 469

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/430 (43%), Positives = 290/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVFQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DII+F+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAINEADIIVFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L+  +P      + E  + H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEDVLS-SVP------EDEDADEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   +E + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRQYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL++I +A+V++++LDA++ +  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     SI+  YDSS + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGDLYPSIHRAYDSSHLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S ++IT+ L  A   H P      R K+RYAH GG+NPP IV+HGN++     DY+RYL
Sbjct: 353 VSPAKITQILSDATDAHQPPMVGGRRIKMRYAHMGGQNPPTIVVHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|384082122|ref|ZP_09993297.1| GTP-binding protein Der [gamma proteobacterium HIMB30]
          Length = 470

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/429 (43%), Positives = 279/429 (65%), Gaps = 7/429 (1%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           PV+ LVGRPNVGKSTLFNRLT SRDALVA+Y GLTRDR YG   +    F++IDTGG   
Sbjct: 4   PVIALVGRPNVGKSTLFNRLTRSRDALVADYAGLTRDRQYGRAVLSGHPFLLIDTGGLTG 63

Query: 63  EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
             + GI   M +Q+K AI E+D ++F+VD   G+   D+ + + LR++ +P+ LV NK +
Sbjct: 64  G-EAGIDAAMAEQSKAAIDEADAVVFMVDAASGIAASDQTVADMLRRNDKPVWLVANKID 122

Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNIHS 179
             N+ I+L DFY LG G P  I+A +G G+    + +L     L  +     +E  +   
Sbjct: 123 GQNADIALSDFYSLGFGEPQAIAASHGRGVGVLSDQLLDHFGLLDVEPLDANQERQDAPG 182

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
           I   ++ +VG+PNVGKSTL+N +LGE+RV+ +D PGTTRDSI   +E  ++ Y LIDTAG
Sbjct: 183 I---RIGVVGRPNVGKSTLVNRMLGEDRVVVFDLPGTTRDSIYIPYERYDETYTLIDTAG 239

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  E +EKFS++KTL++I +++VVIL++DAQ+ +  QD+++   + ++GR+L+V 
Sbjct: 240 VRRRGRVNETVEKFSIVKTLQAIEDSHVVILVVDAQEGLVEQDLHLMGTVVDAGRALVVA 299

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +  + R  I+  +K++L+F+ +A  ++ISA+    +     SI   Y ++    
Sbjct: 300 VNKWDHLDPDLRAKIRETLKRRLSFIPWAKVHYISALHGTGVGDLYGSIKEAYAAATTKF 359

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST+ +TR L  A+ +H P   +  R KLRYAHQGG NPP I+IHGN+ K +   Y+RYLE
Sbjct: 360 STNVLTRILEDAVADHQPPLVRGRRIKLRYAHQGGMNPPRIIIHGNQTKDVPEAYRRYLE 419

Query: 420 KYFYRTFSL 428
             + R   +
Sbjct: 420 NIYRRVLQI 428


>gi|226954466|ref|ZP_03824930.1| GTP-binding protein EngA [Acinetobacter sp. ATCC 27244]
 gi|294651482|ref|ZP_06728795.1| GTP-binding protein EngA [Acinetobacter haemolyticus ATCC 19194]
 gi|226834815|gb|EEH67198.1| GTP-binding protein EngA [Acinetobacter sp. ATCC 27244]
 gi|292822632|gb|EFF81522.1| GTP-binding protein EngA [Acinetobacter haemolyticus ATCC 19194]
          Length = 469

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DII+F+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L  E+P      + E    H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLA-EVP------EDENPEEHN 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +ANVV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDANVVVIVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+SS + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESSNLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|424743278|ref|ZP_18171591.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-141]
 gi|422943539|gb|EKU38555.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-141]
          Length = 469

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/429 (43%), Positives = 293/429 (68%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L +++P  +  ++ +      
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVL-VDVPEDENPEEHDKAT--- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFERDGRQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K  E+IEKFS++KTL++I +A+V++++LDA++ +  QD+++  +  E+GR++++ 
Sbjct: 234 VRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     +I+  YDSS + +
Sbjct: 294 INKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGDMYPTIHRAYDSSHLKV 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYLE
Sbjct: 354 SPAKLTQILNDATEAHQPPMIGGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413

Query: 420 KYFYRTFSL 428
             F + + L
Sbjct: 414 NVFRKVYKL 422


>gi|381159933|ref|ZP_09869165.1| ribosome-associated GTPase EngA [Thiorhodovibrio sp. 970]
 gi|380877997|gb|EIC20089.1| ribosome-associated GTPase EngA [Thiorhodovibrio sp. 970]
          Length = 469

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/429 (46%), Positives = 285/429 (66%), Gaps = 4/429 (0%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SR ALVA+YPGLTRDR YG G +G + +I++DTGG 
Sbjct: 1   MLPVITLVGRPNVGKSTLFNRLTRSRHALVADYPGLTRDRQYGVGQLGPRPYILVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                   M    +Q + AI E+D ++F+VD R G +  D  I   LR++G+P+ LV+NK
Sbjct: 61  SGSSDPLDML-TERQVRLAIAEADHLLFLVDARDGCLTGDFDIAAELRRTGKPLTLVVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++S+ L +F+ LG+G+P  I+A +G G+   LE+I     P +     +      +
Sbjct: 120 VDRLDASLVLPEFHTLGLGDPLPIAASHGRGLNTLLEHIFDALPPAET--DAEAVGTEEA 177

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I++A+VG+PN GKSTLIN LLGE RV+T DTPGTTRDS+   F+ N + Y LIDTAG
Sbjct: 178 AKGIQIAVVGRPNAGKSTLINRLLGEERVVTSDTPGTTRDSLFIPFQANGRDYTLIDTAG 237

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K  E+IEK+SVIK +++I   NVVIL++DAQ  I  QD  +A+ + +SGR+L+V 
Sbjct: 238 MRRRAKVTELIEKYSVIKAMQAIDACNVVILVVDAQVGIGEQDATLASHVIDSGRALVVA 297

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  ++R  IK++ ++KL FL FA    ISA+  +++   ++++   Y S+I  L
Sbjct: 298 INKWDGLSADERAKIKDSYERKLAFLDFAERFQISALHGSSVGLLLDAVEGAYASAIRDL 357

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
            T  +TR L   +  H P      R KLRYAHQGG+NPP+IVIHGN+++ + + Y+RYL 
Sbjct: 358 PTPLLTRLLADLVSEHQPPLVHGRRIKLRYAHQGGRNPPVIVIHGNQVEAVPDAYRRYLI 417

Query: 420 KYFYRTFSL 428
             F +  SL
Sbjct: 418 NRFRKELSL 426


>gi|262280930|ref|ZP_06058713.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257830|gb|EEY76565.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 469

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/429 (43%), Positives = 292/429 (68%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L +++P  +  ++ +      
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVL-VDVPEDENPEEHDKAT--- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFERDGRQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K  E+IEKFS++KTL++I +A+V++++LDA++ +  QD+++  +  E+GR++++ 
Sbjct: 234 VRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     +I+  YDSS + +
Sbjct: 294 INKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGEMYPTIHRAYDSSHLKV 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S +++T+ L  A   H P      R K+RYAH GG+NPP IVIHGN++     DY+RYLE
Sbjct: 354 SPAKLTQILNDATDAHQPPMVGGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413

Query: 420 KYFYRTFSL 428
             F + + L
Sbjct: 414 NVFRKVYKL 422


>gi|29654548|ref|NP_820240.1| GTP-binding protein EngA [Coxiella burnetii RSA 493]
 gi|153208833|ref|ZP_01947057.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177']
 gi|154706295|ref|YP_001424682.1| GTP-binding protein EngA [Coxiella burnetii Dugway 5J108-111]
 gi|161830868|ref|YP_001597096.1| GTP-binding protein EngA [Coxiella burnetii RSA 331]
 gi|165921454|ref|ZP_02219642.1| GTP-binding protein EngA [Coxiella burnetii Q321]
 gi|212218660|ref|YP_002305447.1| GTP-binding protein EngA [Coxiella burnetii CbuK_Q154]
 gi|41017032|sp|Q83C83.1|DER_COXBU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|189037144|sp|A9KFU3.1|DER_COXBN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|189037145|sp|A9NDV6.1|DER_COXBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|238058971|sp|B6J7Q3.1|DER_COXB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|29541815|gb|AAO90754.1| GTP-binding protein [Coxiella burnetii RSA 493]
 gi|120575684|gb|EAX32308.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177']
 gi|154355581|gb|ABS77043.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111]
 gi|161762735|gb|ABX78377.1| GTP-binding protein EngA [Coxiella burnetii RSA 331]
 gi|165916769|gb|EDR35373.1| GTP-binding protein EngA [Coxiella burnetii Q321]
 gi|212012922|gb|ACJ20302.1| GTP-binding protein [Coxiella burnetii CbuK_Q154]
          Length = 443

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/430 (46%), Positives = 277/430 (64%), Gaps = 9/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ +VGRPNVGKSTLFN LT SR ALVA+ PG+TRDR YGE  I  +  +++DTGG 
Sbjct: 1   MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                K +      Q +QAI ESD I+F+VD + GLV  D++I   LRK G+ I L +NK
Sbjct: 61  VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++   +++   DFY+LG G P++I+A  G G+K+ +  +L   LP +K   +KE      
Sbjct: 121 ADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLE-NLPEEKEVIEKEVG---- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+A++G+PNVGKSTLIN LLGE RVI YD PGTTRDSI   F  N++ Y LIDTAG
Sbjct: 176 ---IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K  + +EKFS+IK+L+++  A+VVI LLDA+Q ++ QD+ + N I E+G SLI+ 
Sbjct: 233 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   +R  ++N I +++ F+ FA   FISA+    +     +I   Y S    L
Sbjct: 293 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T ++TRAL  A+  H P   K  R +LRYAH G ++P  IV+HG + K +   Y RYL 
Sbjct: 353 TTGQLTRALEKAVAEHEPPLVKGRRIRLRYAHLGARHPLTIVVHGKQTKSLPQSYSRYLA 412

Query: 420 KYFYRTFSLI 429
            YF +TF+ I
Sbjct: 413 NYFRKTFNFI 422


>gi|381197783|ref|ZP_09905122.1| GTP-binding protein Der [Acinetobacter lwoffii WJ10621]
          Length = 469

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/430 (43%), Positives = 289/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVFQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DII+F+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAINEADIIVFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L+  +P      + E  + H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEDVLS-SVP------EDEDADEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   +E + + Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRHYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL++I +A+V++++LDA++ +  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     SI+  YDSS + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGDLYPSIHRAYDSSHLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S ++IT+ L  A   H P      R K+RYAH GG+NPP IV+HGN++     DY+RYL
Sbjct: 353 VSPAKITQILSDATDAHQPPMVGGRRIKMRYAHMGGQNPPTIVVHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|309782317|ref|ZP_07677044.1| ribosome-associated GTPase EngA [Ralstonia sp. 5_7_47FAA]
 gi|308918935|gb|EFP64605.1| ribosome-associated GTPase EngA [Ralstonia sp. 5_7_47FAA]
          Length = 376

 Score =  382 bits (981), Expect = e-103,   Method: Composition-based stats.
 Identities = 183/358 (51%), Positives = 261/358 (72%), Gaps = 4/358 (1%)

Query: 72  MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISL 130
           M KQT+QA++E+D++IFIVDGR GL  QD++I ++LRK+G+ I+L +NK+E +  ++++ 
Sbjct: 1   MAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNKAEGMRYTAVAS 60

Query: 131 DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGK 190
           DFYELG+G+P  ISA +G+G+ + +   L  +L + +  +  E  + H     ++AIVG+
Sbjct: 61  DFYELGLGDPAAISAAHGDGVNDLVAEAL--DLAFAERPELAEAADAHD-HGTRIAIVGR 117

Query: 191 PNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVI 250
           PNVGKSTL+N+L+GE RVI +D PGTTRD+I   FE N K Y LIDTAG+R+R K FE I
Sbjct: 118 PNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAI 177

Query: 251 EKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQ 310
           EKFSV+KTL+SI +ANVV+L+LDAQQ+IS QD +IA FI ESGR+L++ VNKWD +  + 
Sbjct: 178 EKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVNKWDGLTGHA 237

Query: 311 RKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALIS 370
           R  IK+++++KL FLSFA  ++ISA +   I + M+S++  Y ++++ L T ++TR L+ 
Sbjct: 238 RDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPTPKLTRVLME 297

Query: 371 AIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSL 428
           A++   P R  + RPKLRYAHQGG NPPI+VIHGN L  I   Y+RYLE  F   F L
Sbjct: 298 AVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRYLEGRFREAFQL 355



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)

Query: 5   LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
           + +VGRPNVGKSTL N L      +  + PG TRD  Y +     K + +IDT G     
Sbjct: 112 IAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLR--- 168

Query: 65  KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
           K+G + E  +     +T Q+I ++++++ I+D +Q + +QD  I  F+ +SG+ +V+ +N
Sbjct: 169 KRGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVN 228

Query: 120 K--------SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENI 158
           K         + I   +      L   N H ISA    GI   ++++
Sbjct: 229 KWDGLTGHARDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSV 275


>gi|320539280|ref|ZP_08038950.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson]
 gi|320030672|gb|EFW12681.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson]
          Length = 495

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/458 (42%), Positives = 289/458 (63%), Gaps = 27/458 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FII+DTGG 
Sbjct: 1   MISVVALVGRPNVGKSTLFNRLTQTRDALVADFPGLTRDRKYGRAEVEGNEFIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   + G+   M  Q+  AI E+DI++F+VD R GL+  D+ I   LR   +   LV+NK
Sbjct: 61  DGH-EDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRNRQKATFLVVNK 119

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------K 166
           ++ ++  + + DFY LG+G  + I+A +G G++  +E++L   LP               
Sbjct: 120 TDGLDPDVVTADFYSLGLGEVYAIAASHGRGVRQLIEHVLMPFLPEKEEEVELTEEEANA 179

Query: 167 KFFKKKEFTNIHSIEY------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
            ++ ++   N+   E             IK+AIVG+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 AYWVEQNAENLEGEEDEPEDDFNPQDLAIKLAIVGRPNVGKSTLTNRILGEERVVVYDMP 239

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDSI      + ++Y+LIDTAG+R+  K  E +EKFSVIKTL++I +ANVV+L++DA
Sbjct: 240 GTTRDSIYIPMVRDEREYVLIDTAGVRKHGKVTETVEKFSVIKTLQAIEDANVVLLVIDA 299

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
           ++ IS +D+++  FI  SGRSL++ VNKWD +   +R  +K  +  +L F+ FA  +FIS
Sbjct: 300 REGISDRDLSLLGFILNSGRSLVIVVNKWDGMSEEERTHVKEMLDLRLGFVDFARVHFIS 359

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
           A+  + + +  ES+   Y  +   ++TS +T+ +  A+ +H P   +  R KL+YAH GG
Sbjct: 360 ALHGSGVGNLFESVLEAYACATHRVNTSMLTKIMHMAVDDHQPPLVRGRRVKLKYAHAGG 419

Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDAL 432
            NPPI+VIHGN++  + + YKRYL  YF R+  ++  L
Sbjct: 420 YNPPIVVIHGNQVSDLSDSYKRYLMNYFRRSLKVMGTL 457


>gi|53802988|ref|YP_115285.1| GTPase [Methylococcus capsulatus str. Bath]
 gi|81823578|sp|Q603B5.1|DER_METCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|53756749|gb|AAU91040.1| GTPase family protein [Methylococcus capsulatus str. Bath]
          Length = 463

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/429 (44%), Positives = 276/429 (64%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ L+GR NVGKSTLFN LT +RDALVA++PGLTRDR YG    G++ + ++DTGG 
Sbjct: 1   MLPVVALIGRTNVGKSTLFNYLTRTRDALVADFPGLTRDRQYGRVQRGERDYFVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E  +GI  +  KQ    + E+D+I+F+VD   G+   D+LI + LR+  +P++LV NK
Sbjct: 61  -IEAAEGIDDQAMKQVDHVLDEADVILFLVDVHAGMTAGDELIADRLRRINKPVLLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +   + I+  +F+  G+G P +ISA +G G+   LE +  + LP     +  E     +
Sbjct: 120 IDGTQALIAGAEFHAFGLGEPLLISAAHGTGVHALLERVEAL-LP-----ESGETGETEA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I++A+VG+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE   ++Y LIDTAG
Sbjct: 174 EGGIRIAVVGRPNVGKSTLVNRILGEERVVVYDQPGTTRDSIYIPFERRGERYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR +  E +EKFSVIK+ ++I +A+VVI L+DA + ++ QD N+   + E GR L++ 
Sbjct: 234 IRRRARVNEGVEKFSVIKSFQAIEKAHVVIYLVDASEGLTDQDANLLGMVLEIGRGLLIG 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
            NKWD +   QR+ +K  I  KL FL FA   FISA+    +   M+++  +Y S+++ L
Sbjct: 294 FNKWDGLEPEQREKVKRQIDVKLPFLEFAKKYFISALHGTGVGVLMDAVKPIYQSAMLDL 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S SR+T+ L   +  HPP   +  R KL+YAHQGG NPP++VIHGN+ + +   Y+RYL 
Sbjct: 354 SASRLTQVLQDCLTAHPPPLVRGRRIKLKYAHQGGHNPPVVVIHGNQTEDLPAAYRRYLG 413

Query: 420 KYFYRTFSL 428
             F   F L
Sbjct: 414 NEFRNAFKL 422


>gi|429332410|ref|ZP_19213135.1| GTP-binding protein Der [Pseudomonas putida CSV86]
 gi|428762909|gb|EKX85099.1| GTP-binding protein Der [Pseudomonas putida CSV86]
          Length = 488

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/441 (43%), Positives = 284/441 (64%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGEARWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R GL   D++I   LRK  +   LV NK
Sbjct: 61  TGD-EAGMDEKMAEQSLMAIEEADYVLFLVDARAGLTAADQMIAEHLRKRNKQSFLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK--------FFKK 171
            +NI+   +  +F  +G+GN   ++   G GI   +E +L  ++P  +          + 
Sbjct: 120 IDNIDPDTARAEFAPMGMGNAIPVAGSQGRGINALMETVLG-DVPRDQEEESLDENVAEG 178

Query: 172 KEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
           +E T I      + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE N
Sbjct: 179 EEATRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERN 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
            +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 EEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             E+GR++++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +  +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMQPSERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYQSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
            + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+++
Sbjct: 359 QNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPIIVIHGNQVE 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            +   Y RYLE  + R   L+
Sbjct: 419 KVPRSYSRYLENTYRRVLKLV 439


>gi|163749553|ref|ZP_02156800.1| GTP-binding protein EngA [Shewanella benthica KT99]
 gi|161330663|gb|EDQ01600.1| GTP-binding protein EngA [Shewanella benthica KT99]
          Length = 492

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/454 (42%), Positives = 283/454 (62%), Gaps = 33/454 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FI++DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRASLSGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI   M +Q+  AI E+D+++F+ D R GL   D  I   LR+  +   +V NK
Sbjct: 61  DG-TEEGIEVHMAQQSLAAIEEADVVLFLTDARAGLTAADHAIAEHLRRRDKTTFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            + I++ S   +F+ LG+G  + ++A  G G+ N +E  L    PY +            
Sbjct: 120 IDGIDADSACAEFWALGLGEVYQMAASQGRGVTNMIEYALA---PYAEALGLHRDGEGDI 176

Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
                         ++K   ++     IK+AI+GKPNVGKSTLIN +LGE RV+ YD+PG
Sbjct: 177 EVEEREYSEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLINRILGEERVVVYDSPG 232

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI        ++Y+LIDTAG+RRR+K  E +EKFSVIKTLK++ + NVV+L++DA+
Sbjct: 233 TTRDSIYIPMVREGREYVLIDTAGVRRRSKVNETVEKFSVIKTLKAVEDCNVVLLIIDAR 292

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + I+ QD+ +  F   +GR+L++ VNKWD I    +  +K+ + ++L F+ FA  +FISA
Sbjct: 293 EGITEQDLGLLGFALNAGRALVIAVNKWDGIDQEIKDRVKSELDRRLGFIDFARIHFISA 352

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +    +    ES+   YDS+   +STS +TR +  A  +H P      R KL+YAH GG 
Sbjct: 353 LHGTGVGHLYESVEEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGY 412

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++K + + YKRY+  Y+ R+  ++
Sbjct: 413 NPPIVVIHGNQVKKLPDSYKRYMMNYYRRSLKVM 446


>gi|78484970|ref|YP_390895.1| small GTP-binding protein domain-containing protein [Thiomicrospira
           crunogena XCL-2]
 gi|78363256|gb|ABB41221.1| GTP-binding protein [Thiomicrospira crunogena XCL-2]
          Length = 480

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/429 (42%), Positives = 283/429 (65%), Gaps = 5/429 (1%)

Query: 2   KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
           K V+ LVGRPNVGKSTLFNRLT SRDA+VA+YPGLTRDR YG G +G   +I++DTGG  
Sbjct: 3   KTVIALVGRPNVGKSTLFNRLTRSRDAIVADYPGLTRDRQYGTGRVGSTPYIVVDTGGLS 62

Query: 62  PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
            E ++G+   M  Q + AI E+D ++F+VDGR GL+  D+ I +++R   +P+ L++NK+
Sbjct: 63  GE-QEGVDPLMAGQVQSAIGEADAVLFLVDGRAGLIPADESIASYIRHFNKPVYLLVNKA 121

Query: 122 ENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
           E      I+ DFY++G+G P +IS+ +G+ +   +E++L+      +  + ++  ++   
Sbjct: 122 EGHKKDVIANDFYQMGLGEPFVISSAHGDNVNEMIESVLS---DVAQDVEDEDELDLDKH 178

Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
             I+VA++G+PNVGKSTLIN ++GE RV+ +D PGTTRDSI   FE   + Y LIDTAG+
Sbjct: 179 PGIRVAVIGRPNVGKSTLINRMIGEERVVAFDMPGTTRDSIYVPFERQGELYTLIDTAGV 238

Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
           RRR    E IEKFS++K ++++  +NVV+L++D  + I+ QD+ +     ESGR L++ +
Sbjct: 239 RRRKNIKEKIEKFSIVKAIEAMESSNVVVLVVDGSEGITDQDLTLLGLALESGRGLVIAI 298

Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
           NKWD++  +QR  IK+ ++ KL+F+ +A  + ISA+    +    ++IN VY +++  +S
Sbjct: 299 NKWDNLTSDQRAKIKHELEYKLHFVDYAKRHLISALHGTGVGDLFKTINAVYHAAMKQVS 358

Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
           TS + R L  A+ +H P      R KLRYAH GG NPP +++HG ++  +   Y +YL  
Sbjct: 359 TSDLNRVLEQAVLDHQPPLIGGRRVKLRYAHLGGLNPPRVIVHGTQVDKLPQAYSKYLMN 418

Query: 421 YFYRTFSLI 429
            F + F  +
Sbjct: 419 VFRKAFKWV 427


>gi|422023272|ref|ZP_16369777.1| GTP-binding protein Der [Providencia sneebia DSM 19967]
 gi|414094040|gb|EKT55710.1| GTP-binding protein Der [Providencia sneebia DSM 19967]
          Length = 493

 Score =  382 bits (980), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/454 (43%), Positives = 292/454 (64%), Gaps = 26/454 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG   +    FIIIDTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++G+   M  Q+ QAI E+D+++F+VD R GL+  D+ I   LR   +   LV NK
Sbjct: 61  D-GTEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
           ++ I+++  + DFY LG+G  + I+A +G G+   +E+ L   IE+  ++  +  E    
Sbjct: 120 TDGIDANTVIGDFYALGLGEIYSIAASHGRGVTQLIEHSLKPFIEVDEEENVELTEEEAN 179

Query: 178 HSIEY----------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
            +                         IK+AIVG+PNVGKSTL N +LGE RV+ +D PG
Sbjct: 180 AAYWAELEAAEEGLEDEEDDFDPTGLPIKLAIVGRPNVGKSTLTNRILGEERVVVFDMPG 239

Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
           TTRDSI    E + ++YILIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 240 TTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDAR 299

Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
           + IS QD+++  FI  +GRSL++ VNKWD +    R+ +K+ ++ +L F+ FA  +FISA
Sbjct: 300 EGISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFISA 359

Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
           +  + + +  ES+   Y+S+   + T+ +TR +  A   H P   +  R K++YAH GG 
Sbjct: 360 LHGSGVGNLFESVQEAYESATRRVGTALLTRIMKMAEDEHQPPLIRGRRVKMKYAHAGGH 419

Query: 396 NPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           NPPI+VIHGN++  + + YKRYL  YF R+ +++
Sbjct: 420 NPPIVVIHGNQVSDLPDSYKRYLMNYFRRSLNVM 453


>gi|333985589|ref|YP_004514799.1| GTP-binding protein engA [Methylomonas methanica MC09]
 gi|333809630|gb|AEG02300.1| GTP-binding protein engA [Methylomonas methanica MC09]
          Length = 463

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/429 (45%), Positives = 285/429 (66%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN LT SR+ALVA+YPGLTRDR YG    G++  +++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNYLTRSREALVADYPGLTRDRQYGRVKRGERDCLVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             +++ GI     KQ + A+ E+D+  F+VD R G+   D+ I + LRK G+P+VLV+NK
Sbjct: 61  TDDLE-GIDIFAKKQVEIALQEADVAFFMVDARDGINASDEAIADMLRKLGKPVVLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + I+S +++ DFY L +G P  I+A +G  +   L  I  +  P +  F++++      
Sbjct: 120 IDGIDSNTVTHDFYSLALGEPVPIAASHGRNVHELLGRIDDLIPPMEDEFQEQD------ 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              I +AIVG+PNVGKSTL+N LLGE RV+ +D  GTTRDSI   FE NN+K+ LIDTAG
Sbjct: 174 -PGIAIAIVGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDSIYIPFERNNQKFTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR K    +EKFS+IK+L++I +A+VVI L+DA++ ++ QD +I   + E+GR+LI+ 
Sbjct: 233 MRRRAKVSLTVEKFSIIKSLQAIEKAHVVIYLIDAREGVTDQDAHILGLVLEAGRALIIG 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  + R  +K  I+ KL FL FA  + ISA+  + +    + ++ +YD+++I +
Sbjct: 293 LNKWDGLDADHRAFVKKQIEIKLPFLDFAEKHPISALHGSGVGKLFDVVHSLYDAAMIDM 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L  A+ +H P      R KL+YAHQGG+NPP++VIHG +   + + YKR+L 
Sbjct: 353 STPVLTRILSDAVASHQPPLVGGRRIKLKYAHQGGRNPPVVVIHGVQTDSLPDSYKRFLM 412

Query: 420 KYFYRTFSL 428
            Y+     L
Sbjct: 413 NYYREQLRL 421


>gi|358010797|ref|ZP_09142607.1| GTP-binding protein Der [Acinetobacter sp. P8-3-8]
          Length = 469

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 290/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYENKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GESEGGIDSY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE +LT ++P      + E    H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEEVLT-DIP------EDENPEDHD 172

Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   +E + + Y LIDTA
Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRHYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL++I +A+V++++LDA++ +  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     +I+  YDSS + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGELYPTIHRAYDSSHLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPMISGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + ++L
Sbjct: 413 ENVFRKVYNL 422


>gi|299771613|ref|YP_003733639.1| GTP-binding protein EngA [Acinetobacter oleivorans DR1]
 gi|298701701|gb|ADI92266.1| GTP-binding protein EngA [Acinetobacter oleivorans DR1]
          Length = 469

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/429 (44%), Positives = 290/429 (67%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GENEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L   +P  +  ++ +      
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLE-NVPEDESEEEHD-----K 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE + ++Y LIDTAG
Sbjct: 174 ATGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFERDGRQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K  E+IEKFS++KTL++I +A+VV+++LDA++ +  QD+++  +  E+GR++++ 
Sbjct: 234 VRRKGKVEEMIEKFSIVKTLQAIKDAHVVVVVLDAREGVVEQDLHLIGYALEAGRAMMIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++    RK  K ++ ++ +F+ +A  + ISA+    +     +I+  YDSS + +
Sbjct: 294 INKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGDMYPTIHRAYDSSHLKV 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S +++T+ L  A   H P      R K+RYAH GG+NPP IVIHGN++     DY+RYLE
Sbjct: 354 SPAKLTQILNDATDAHQPPMVSGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413

Query: 420 KYFYRTFSL 428
             F + + L
Sbjct: 414 NVFRKVYKL 422


>gi|406936113|gb|EKD69916.1| hypothetical protein ACD_46C00700G0003 [uncultured bacterium]
          Length = 438

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/430 (46%), Positives = 289/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PVL +VGRPNVGKSTLFNRLT SRDAL++++PG TRDR YGE  + ++ FIIIDTGG 
Sbjct: 1   MLPVLAIVGRPNVGKSTLFNRLTRSRDALISDFPGTTRDRQYGEVNLHERHFIIIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             E+   +   +T+Q  QAI ++D I+F+VD + G+  +DK+I + LRK+G+P  L +NK
Sbjct: 61  TEEIDD-VGKLITQQALQAIEDADKILFLVDAQAGITPEDKMIADSLRKAGKPFFLAVNK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++  + +IS  D YELG+G P  ISA +G G+   ++ +     P +   ++++FT I  
Sbjct: 120 TDGTDPNISTADAYELGLGTPLPISAAHGTGVMTLVQTLFP--EPTEISIEEEKFTGI-- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
               K+AIVG+PNVGKSTL N +LGE RVI +D+PGTTRDSI    E   K Y LIDTAG
Sbjct: 176 ----KLAIVGRPNVGKSTLTNRMLGEERVIVHDSPGTTRDSIFIPLERYEKHYTLIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +R+R K  +V EKFSV+KTL++I  A+VV+ ++DA+  +S QD+ +  FI E G++L++ 
Sbjct: 232 VRKRKKVADVPEKFSVVKTLQAIESAHVVLYIIDARIGVSEQDLKLLGFILECGKALVIA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +    R+  K  I ++L+F+SFA  +FISA+  + + +  ES++  Y+S+   L
Sbjct: 292 INKWDGMTEEAREHAKATIDRQLDFVSFAKIHFISALHGSGVGNLFESVDEAYESATKKL 351

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           STS +TR L  A+  H P      R KLRYAH GG NPP ++IHGN++  +   Y+++L 
Sbjct: 352 STSLLTRLLQQALVTHSPPLVHGRRIKLRYAHPGGNNPPRVIIHGNQVDELPESYRKFLM 411

Query: 420 KYFYRTFSLI 429
           K+F +   L+
Sbjct: 412 KFFIKKLKLV 421


>gi|293604542|ref|ZP_06686947.1| histidine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817123|gb|EFF76199.1| histidine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 431

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/361 (50%), Positives = 252/361 (69%), Gaps = 7/361 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P+R++  GP+FRHE
Sbjct: 63   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPQRVYSIGPVFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAELI+M +RLWK L LK++ LELNS+G   ER  
Sbjct: 123  RPQRGRYRQFHQIDVEALGFVGPDVDAELIVMLARLWKLLGLKDVRLELNSLGQPAERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI +++KH+D     ED +  LY N LRVLD+KN  ++E+  +AP+L D+L  +S 
Sbjct: 183  HRAALIEHLEKHRDI--LDEDGQRRLYTNPLRVLDTKNPAMQEMANSAPRLFDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y +N +LVRG+DYYN TVFEW TD+LGSQ ++CGGGRYD LI+ 
Sbjct: 241  AHFEGVCQRLTEAGIEYSLNPRLVRGLDYYNLTVFEWVTDRLGSQGTVCGGGRYDGLIEL 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +CD+Y+VH G++A+  A  + E LR  
Sbjct: 301  LGGKPAPAVGFAIGMERLLDLWEQ-SVQLEAPAECDVYVVHQGEDAQRLAASVGETLRDA 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL VI++         FKSQ KRA+AS A  A I+G +E+ + T  +K LR   +  T +
Sbjct: 360  GLSVIVHAG----SAGFKSQFKRADASGARVAVILGADEVASQTASVKYLRADAQGDTAQ 415

Query: 1228 Q 1228
            Q
Sbjct: 416  Q 416


>gi|374262919|ref|ZP_09621479.1| GTP-binding protein EngA [Legionella drancourtii LLAP12]
 gi|363536735|gb|EHL30169.1| GTP-binding protein EngA [Legionella drancourtii LLAP12]
          Length = 468

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/431 (47%), Positives = 291/431 (67%), Gaps = 12/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT ++DALVA++PGLTRDR YG+    +KS+I++DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRLTKTQDALVADFPGLTRDRQYGQAQHNEKSYIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             +    +   M+KQ+  A+ E+DI++F+VDGR GL   D+ I N LRK  + + LV+NK
Sbjct: 61  GVD-DIAVDSLMSKQSTIALNEADIVLFLVDGRSGLTGVDEKIANNLRKLSKKVHLVVNK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++  ++  DF  LGI + H IS+ +G+GI + L+ +L        F  + +   +  
Sbjct: 120 TEGLDDDVACADFQSLGIADIHSISSSHGSGIYSLLDAVLA------PFLSQPD--EVAE 171

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + IK+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F  + ++YILIDTAG
Sbjct: 172 DDAIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSIAIPFVRDEQRYILIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+++  E IEKFSVIKTL++I E+NV + LLDA + I+ QD+N+  FI ESG++L++ 
Sbjct: 232 VRRKSRIDEKIEKFSVIKTLQAIKESNVCLQLLDANEGITDQDMNLLGFIIESGKALVIA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    + +IK+ + ++L+F +FA   FISA+  + + +  + IN  Y S+I   
Sbjct: 292 VNKWDGLDEEHKDMIKSELSRRLHFANFAKIRFISALHGSGVGTLFKDINEAYASAIQSF 351

Query: 360 STSRITRALIS-AIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           ST R+TR L   + K+ PPC     R KLRYAH GG NPP+IVIHGN+L  + + YKRYL
Sbjct: 352 STPRLTRLLQDISTKHTPPCVNGR-RIKLRYAHLGGHNPPVIVIHGNQLADLPDSYKRYL 410

Query: 419 EKYFYRTFSLI 429
              F +   L+
Sbjct: 411 NNEFTKHLELV 421


>gi|423016752|ref|ZP_17007473.1| histidyl-tRNA synthetase [Achromobacter xylosoxidans AXX-A]
 gi|338780180|gb|EGP44595.1| histidyl-tRNA synthetase [Achromobacter xylosoxidans AXX-A]
          Length = 432

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/366 (50%), Positives = 257/366 (70%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG++L++RPE TA ++R+ IE+NL+YD P+R++  GP+FRHE
Sbjct: 63   GEVTDIVEKEMYTFTDALNGESLTMRPEMTAGIVRASIEHNLLYDRPQRVYSIGPVFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAELI+M +RLWK L L ++ LELNS+G   ER  
Sbjct: 123  RPQRGRYRQFHQIDVEALGFAGPDVDAELIVMLARLWKLLGLTDVRLELNSLGQPAERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI +++KH D     ED K  LY N LRVLD+KN  ++E+  +AP+L D+L ++S 
Sbjct: 183  HRAALIAHLEKHSDI--LDEDGKRRLYTNPLRVLDTKNPAMQEMADSAPRLFDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LGSQ ++CGGGRYD LI+ 
Sbjct: 241  AHFDGVCQRLTDAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGSQGTVCGGGRYDGLIEL 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +CD+Y+VH G++A+  A  + E+LR  
Sbjct: 301  LGGKAAPAVGFAIGMERLLDLWEQ-SVQVEAPAECDVYVVHQGEDAQRLAARVGEDLRDA 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE-DPTL 1226
            GL V+++        SFKSQ KRA+AS A  A I+G +E+ + T  IK LR   + D   
Sbjct: 360  GLSVVVHAG----AASFKSQFKRADASGARVAVILGADEVASQTASIKFLRTDAQGDGAQ 415

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 416  QQVPLA 421


>gi|170723482|ref|YP_001751170.1| GTP-binding protein EngA [Pseudomonas putida W619]
 gi|229784138|sp|B1JDV4.1|DER_PSEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|169761485|gb|ACA74801.1| small GTP-binding protein [Pseudomonas putida W619]
          Length = 487

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/440 (43%), Positives = 282/440 (64%), Gaps = 12/440 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +SFI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKSAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENIL-------TIELPYKKFFKKK 172
            +NI++ ++  +F  LG+GN   ++   G GI   +E++L         E   ++  + +
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINQLMESVLGHIPRDAEEEALDQEVAEGE 179

Query: 173 EFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
           E   I      + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE +N
Sbjct: 180 EAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERDN 239

Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
           +KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F 
Sbjct: 240 EKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299

Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
            E+GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +    +S+ 
Sbjct: 300 LEAGRAIVIALNKWDGMESGERDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKSVQ 359

Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
             + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+ + 
Sbjct: 360 AAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTEK 419

Query: 410 IGNDYKRYLEKYFYRTFSLI 429
           I   Y RYLE  + R   L+
Sbjct: 420 IPKSYSRYLENTYRRVLKLV 439


>gi|410621695|ref|ZP_11332541.1| GTP-binding protein [Glaciecola pallidula DSM 14239 = ACAM 615]
 gi|410158933|dbj|GAC27915.1| GTP-binding protein [Glaciecola pallidula DSM 14239 = ACAM 615]
          Length = 479

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/440 (44%), Positives = 288/440 (65%), Gaps = 18/440 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLTN+RDALVA++PGLTRDR YG      ++FI++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGPAKFENRAFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
               ++GI   M +Q+  AI E+D+++F+VD R GL   D  +   LRK  + + LV NK
Sbjct: 61  TGN-EEGIDVAMAEQSLLAIDEADVVLFLVDARAGLTPDDIGLAEHLRKQSKAMYLVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + ++  S + DF++LG      I+A +G G+   + ++LT   P +K F   E   +  
Sbjct: 120 VDGLDGDSETADFFKLGFPEVLQIAAAHGRGVSQLMTHVLT---PLEKIFPDMEIVEVER 176

Query: 180 IEY-------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
            E              IK+AIVGKPNVGKSTLIN +LGE RV+ +D+PGTTRDSI    +
Sbjct: 177 EEEYPDAKLERLQNSPIKLAIVGKPNVGKSTLINRILGEERVVVFDSPGTTRDSIFIPMK 236

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            + ++YILIDTAG+R+R K  E +EKFS++KTL++I E+NVV+L++DA++ ++ QD+++ 
Sbjct: 237 RDKREYILIDTAGVRKRRKVSETVEKFSIVKTLQAIEESNVVLLVIDAREGVTDQDLSLL 296

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F+  SGRSL++ VNKWD +  + ++ IK  + ++L F+ FA  +FISA+    +    E
Sbjct: 297 GFVLNSGRSLVLAVNKWDGLETHVKEEIKRELDRRLGFVDFARLHFISALHGTGVGHLFE 356

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+   Y+S+ + ++TS +T+ +  A  +H P      R K++YAH GG NPP+IVIHGN+
Sbjct: 357 SVQEAYNSATVRINTSVLTQIMEMAQDDHQPPLIHGRRVKMKYAHAGGYNPPVIVIHGNQ 416

Query: 407 LKYIGNDYKRYLEKYFYRTF 426
           LK + + YKRYL  Y+ +  
Sbjct: 417 LKDLPDSYKRYLMNYYRKAL 436


>gi|407715871|ref|YP_006837151.1| GTP-binding factor [Cycloclasticus sp. P1]
 gi|407256207|gb|AFT66648.1| GTP-binding factor [Cycloclasticus sp. P1]
          Length = 468

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/430 (45%), Positives = 285/430 (66%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN LT +RDALVA+YPGLTRDR YG         +++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNYLTRTRDALVADYPGLTRDRQYGLVKRADIKSLVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                 GI     +Q ++A+ E+D+++F+VD R G+   D+ I   LRK G+ IVLV NK
Sbjct: 61  T-ATADGIDGVAVEQVERALEEADVVLFLVDTRHGIHPIDEEIGQNLRKLGKQIVLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++ ++++  + +F+++G   P  I+A +G G+   L ++  I LP     K + F +  +
Sbjct: 120 TDGLDANTHIAEFHKMGFDKPWPIAATHGRGVVELLRHVSNI-LP-----KIESFDDTLA 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            E I+VA++G+PNVGKSTLIN LLGE RV+ +D PGTTRDS+   FE + K+Y LIDTAG
Sbjct: 174 GEGIRVAVIGRPNVGKSTLINRLLGEERVVVFDQPGTTRDSVFIPFERDGKQYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR+K  E +EKFS+++TL++I + +VVI ++DA + ++ QD ++   + ESGR+L++ 
Sbjct: 234 VRRRSKVSEAVEKFSIVQTLRAIDDTHVVIYMIDASEGVTDQDASLLGMVLESGRALVIG 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +  +QR+ +K  I  KL+FL +A   FISA+  + +    ESI  +Y S++I +
Sbjct: 294 LNKWDGLSEDQREKVKRQIDVKLSFLEYAERYFISALHGSGVGKLFESIGALYRSAMIDM 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST R+T  L +AIK H P      R KL++AHQGG+NPP+I+IHGN+   +   YKRYL 
Sbjct: 354 STPRLTEILENAIKAHQPPLVGGRRIKLKFAHQGGQNPPVIIIHGNQTVSVPGSYKRYLM 413

Query: 420 KYFYRTFSLI 429
             F     L+
Sbjct: 414 NAFREKLGLV 423


>gi|388543578|ref|ZP_10146868.1| GTP-binding protein Der [Pseudomonas sp. M47T1]
 gi|388278135|gb|EIK97707.1| GTP-binding protein Der [Pseudomonas sp. M47T1]
          Length = 487

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/441 (43%), Positives = 283/441 (64%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT SRDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKSRDAIVGDLSGLTRDRQYGEARWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +  +LV NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGFTAADQMIAEHLRKRNKRSILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------YKKFFKK 171
            +NI+  ++  +F  LG+G+   ++   G G+   LE  L  E P             + 
Sbjct: 120 IDNIDPEMARAEFAPLGMGHAIGVAGAQGRGVNTLLEAALG-EFPRDVEEEDLAAGVAEG 178

Query: 172 KEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
           +E   I      + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE N
Sbjct: 179 EEQVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERN 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
           ++KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 DEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             ESGR++++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   S+
Sbjct: 299 ALESGRAIVIALNKWDGMQPSERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYGSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
              + S+I    TSR+T+ L  A++ H P      R KLRYAH GG NPP+IVIHGN+++
Sbjct: 359 QASFKSAITRWPTSRLTQILEDAVQEHQPPMVNSRRIKLRYAHLGGANPPLIVIHGNQVE 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            + N Y RYLE  + R   L+
Sbjct: 419 KVPNSYVRYLENTYRRVLKLV 439


>gi|171059552|ref|YP_001791901.1| radical SAM protein [Leptothrix cholodnii SP-6]
 gi|205829645|sp|B1XXL6.1|RLMN_LEPCP RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|170776997|gb|ACB35136.1| radical SAM enzyme, Cfr family [Leptothrix cholodnii SP-6]
          Length = 393

 Score =  380 bits (976), Expect = e-102,   Method: Composition-based stats.
 Identities = 182/349 (52%), Positives = 244/349 (69%), Gaps = 11/349 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE  FRA QL +WIH+ G +DF +M+DL+ SLR KL +   I    ++S+  S DGT 
Sbjct: 20  QLGEKRFRAVQLFRWIHQRGAADFGQMSDLAKSLRSKLADVACIAPLRVLSEHRSSDGTI 79

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+F V   N +ETV+IPE +R TLCIS+Q GCA+ C FCSTG QGF RNL+  EI+ QL
Sbjct: 80  KWLFDVGDGNAVETVYIPEDDRATLCISSQAGCAVGCRFCSTGHQGFSRNLSTAEILAQL 139

Query: 654 WVTEFKLRREK--NIKINSQG------KRQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
           W  E  LRRE+   + + ++       +R I+N+VMMGMGEPL NY + + AL+++L DH
Sbjct: 140 WYAEHSLRRERAEGVSVGARAATGPASERIISNVVMMGMGEPLQNYAAVLPALRVMLDDH 199

Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELIL 765
            YGLSRR V +STSG++PMID+LA + PV LAVSLHA ++ LR+ LVP+++KYPL EL+ 
Sbjct: 200 GYGLSRRRVTVSTSGVVPMIDRLAADLPVALAVSLHACDDALRDVLVPLNRKYPLAELLG 259

Query: 766 ACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKIL--TSCKINLIPFNCFP 823
           AC  Y+  +PR  ITFEYCML G+ND+D  A  L+ L+     +    CK NLIPFN FP
Sbjct: 260 ACQAYLASAPRDFITFEYCMLDGVNDSDEQARALLKLVGDKGPVGRLPCKFNLIPFNPFP 319

Query: 824 NSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
            S L  S N R++ FA++L++ G+  T+RK RG+DI+AACGQL+GE  D
Sbjct: 320 ESGLKRSGNERVQAFAQVLIDGGLVTTVRKTRGDDIDAACGQLAGEVQD 368


>gi|409200949|ref|ZP_11229152.1| GTP-binding protein Der [Pseudoalteromonas flavipulchra JG1]
          Length = 489

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/449 (43%), Positives = 289/449 (64%), Gaps = 21/449 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  EM +Q+  AI E+DI++F+VD R G+   D+ I   LRK  +   +V NK
Sbjct: 61  DGS-EEGIETEMAEQSLLAIEEADIVLFLVDARAGMTVADQAIAQHLRKQQKNCFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT---IELPYKKFFKKKEFTN 176
           ++ I++ S   +FY+L +G+   I+A +G G+   LE  L     EL  +    + +  +
Sbjct: 120 TDGIDADSNCAEFYQLALGDVQQIAAAHGRGVTQLLELTLQPIIAELTAQDEELEHDDED 179

Query: 177 IHSI----------------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
           I  +                + +K+AI+G+PNVGKSTL N +LGE+RVI YD PGTTRDS
Sbjct: 180 IAELYLEGEEAEDGKTGFEDKPVKLAIIGRPNVGKSTLTNRILGEDRVIVYDMPGTTRDS 239

Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
           I      N+K+Y+LIDTAG+R+R K  +V+EKFSVIKTL++I +ANVV+L++DA++ IS 
Sbjct: 240 IYIPMTRNDKEYVLIDTAGVRKRKKVSDVVEKFSVIKTLQAIEDANVVLLVVDAREGISD 299

Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
           QD+++  F   +GRSL++ VNKWD +    ++ IK  + ++L F+ FA  +FISA+    
Sbjct: 300 QDLSLLGFALNAGRSLVIAVNKWDGLDDYVKERIKTELDRRLGFVDFARLHFISALHGTG 359

Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
           +    ESI+  Y+S+   +ST+ + R +  A  +H P   +  R KL+YAH GG NPP I
Sbjct: 360 VGHLFESIDEAYESATKRVSTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNPPRI 419

Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           VIHGN +  + + YKRYL  Y+ +  +++
Sbjct: 420 VIHGNMVHELPDSYKRYLMNYYRKALNVM 448


>gi|392543685|ref|ZP_10290822.1| GTP-binding protein Der [Pseudoalteromonas piscicida JCM 20779]
          Length = 489

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/449 (43%), Positives = 289/449 (64%), Gaps = 21/449 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  EM +Q+  AI E+DI++F+VD R G+   D+ I   LRK  +   +V NK
Sbjct: 61  DGS-EEGIETEMAEQSLLAIEEADIVLFLVDARAGMTVADQAIAQHLRKQQKNCFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT---IELPYKKFFKKKEFTN 176
           ++ I++ S   +FY+L +G+   I+A +G G+   LE  L     EL  +    + +  +
Sbjct: 120 TDGIDADSNCAEFYQLALGDVQQIAAAHGRGVTQLLELTLQPIIAELTAQDEELENDDED 179

Query: 177 IHSI----------------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
           I  +                + +K+AI+G+PNVGKSTL N +LGE+RVI YD PGTTRDS
Sbjct: 180 IAELYLEGEEAEDGKTGFEDKPVKLAIIGRPNVGKSTLTNRILGEDRVIVYDMPGTTRDS 239

Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
           I      N+K+Y+LIDTAG+R+R K  +V+EKFSVIKTL++I +ANVV+L++DA++ IS 
Sbjct: 240 IYIPMTRNDKEYVLIDTAGVRKRKKVSDVVEKFSVIKTLQAIEDANVVLLVVDAREGISD 299

Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
           QD+++  F   +GRSL++ VNKWD +    ++ IK  + ++L F+ FA  +FISA+    
Sbjct: 300 QDLSLLGFALNAGRSLVIAVNKWDGLDDYVKERIKTELDRRLGFVDFARLHFISALHGTG 359

Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
           +    ESI+  Y+S+   +ST+ + R +  A  +H P   +  R KL+YAH GG NPP I
Sbjct: 360 VGHLFESIDEAYESATKRVSTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNPPRI 419

Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           VIHGN +  + + YKRYL  Y+ +  +++
Sbjct: 420 VIHGNMVHELPDSYKRYLMNYYRKALNVM 448


>gi|212212370|ref|YP_002303306.1| GTP-binding protein EngA [Coxiella burnetii CbuG_Q212]
 gi|238058972|sp|B6IZN3.1|DER_COXB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|212010780|gb|ACJ18161.1| GTP-binding protein [Coxiella burnetii CbuG_Q212]
          Length = 443

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/430 (46%), Positives = 276/430 (64%), Gaps = 9/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ +VGRPNVGKSTLFN LT SR ALVA+ PG+TRDR YGE  I  +  +++DTGG 
Sbjct: 1   MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                K +      Q +QAI ESD I+F+VD + GLV  D++I   L K G+ I L +NK
Sbjct: 61  VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLHKKGKKIFLAVNK 120

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           ++   +++   DFY+LG G P++I+A  G G+K+ +  +L   LP +K   +KE      
Sbjct: 121 ADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLE-NLPEEKEVIEKEVG---- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+A++G+PNVGKSTLIN LLGE RVI YD PGTTRDSI   F  N++ Y LIDTAG
Sbjct: 176 ---IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           IRRR K  + +EKFS+IK+L+++  A+VVI LLDA+Q ++ QD+ + N I E+G SLI+ 
Sbjct: 233 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIA 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +   +R  ++N I +++ F+ FA   FISA+    +     +I   Y S    L
Sbjct: 293 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           +T ++TRAL  A+  H P   K  R +LRYAH G ++P  IV+HG + K +   Y RYL 
Sbjct: 353 TTGQLTRALEKAVAEHEPPLVKGRRIRLRYAHLGARHPLTIVVHGKKTKSLPQSYSRYLA 412

Query: 420 KYFYRTFSLI 429
            YF +TF+ I
Sbjct: 413 NYFRKTFNFI 422


>gi|332527850|ref|ZP_08403887.1| hypothetical protein RBXJA2T_17901 [Rubrivivax benzoatilyticus JA2]
 gi|332112427|gb|EGJ12220.1| hypothetical protein RBXJA2T_17901 [Rubrivivax benzoatilyticus JA2]
          Length = 372

 Score =  379 bits (974), Expect = e-102,   Method: Composition-based stats.
 Identities = 181/338 (53%), Positives = 241/338 (71%), Gaps = 10/338 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE  FRA QL +WIH+ G SDF+KM+DL+ SLR KL  +  +++  ++S+ +S DGT K
Sbjct: 20  LGEKRFRAVQLFRWIHQKGESDFDKMSDLAKSLRGKLAGAAVVESLPVISEHVSADGTTK 79

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+F V   N +ETV+IPE +R TLC+S+Q GCA+ C FCSTG QGF RNL+ GEII QL 
Sbjct: 80  WLFDVGGGNAVETVYIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLSTGEIIAQLR 139

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
             E +LR          G+R I N+VMMGMGEPL NY + + AL+++L DH YGLSRR V
Sbjct: 140 YAEHRLR-------GPDGQRVIDNVVMMGMGEPLQNYAAVVPALRVMLDDHGYGLSRRRV 192

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            +STSG++ MID+L ++CPV LAVSLHA ++ LR+ LVPI++K  ++ L+ AC RY+  +
Sbjct: 193 TVSTSGMVAMIDRLREDCPVALAVSLHAPDDALRDMLVPINRKDGIEALLDACLRYVEAA 252

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
           PR  ITFEYCML G+ND    A +L+ L+R+ ++   CK NLIPFN FP S L  S   R
Sbjct: 253 PRDFITFEYCMLDGVNDAPEQAQQLVHLVRRRRV--PCKFNLIPFNPFPESGLKRSPRER 310

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +  FAK+L ++GI  TIRK+RG+DI+AACGQL+GE  D
Sbjct: 311 VTAFAKVLQDAGIVTTIRKVRGDDIDAACGQLAGEVQD 348


>gi|398924367|ref|ZP_10661156.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM48]
 gi|398952431|ref|ZP_10674779.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM33]
 gi|426407856|ref|YP_007027955.1| GTP-binding protein EngA [Pseudomonas sp. UW4]
 gi|398155185|gb|EJM43639.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM33]
 gi|398173492|gb|EJM61326.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM48]
 gi|426266073|gb|AFY18150.1| GTP-binding protein EngA [Pseudomonas sp. UW4]
          Length = 490

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/444 (43%), Positives = 283/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ E P  +            
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEAALS-EFPRDEDEPQEGEEEEVV 178

Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
               + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  ESGR+L++ +NKWD +  ++R  +K  ++++L F+ +A  +FISA+    + +  
Sbjct: 299 LGFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
            S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QIEKVPKSYVRYLENTYRRVLKLV 442


>gi|238897953|ref|YP_002923633.1| GTP-binding protein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259645880|sp|C4K4J2.1|DER_HAMD5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|229465711|gb|ACQ67485.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 496

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/458 (44%), Positives = 290/458 (63%), Gaps = 27/458 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P++ L+GRPNVGKST FNRLT + +ALVA++PGLTRDR YG   I    FIIIDTGG 
Sbjct: 1   MIPIIALIGRPNVGKSTFFNRLTQTANALVADFPGLTRDRQYGHAEIENHKFIIIDTGGI 60

Query: 61  EP-EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
              E  + I   MT Q+  AI E+D+++FI+D R GL+  D  I   LRK  +   LV N
Sbjct: 61  NGIEGIENIQKHMTHQSFLAIEEADVVLFILDARAGLLPADLEIAKHLRKRKKATFLVAN 120

Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK-------- 170
           K + +NS  +L DFY L +G  + I+A +G G+   + +++T  +P K   +        
Sbjct: 121 KIDGMNSDTALTDFYSLALGKVYGIAASHGRGVAQLMSSVITPFVPEKPIIELSEEELNS 180

Query: 171 ---KKEFTNIHSIEY--------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
              +K+ T +   ++              IK+AIVG+PNVGKSTL+N +L ++R++ YD 
Sbjct: 181 SYWEKQKTEVDKTDFLESKKFLCNPESLPIKLAIVGRPNVGKSTLVNHILAQDRMLVYDI 240

Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
           PGTTRDSI      NN++YI IDTAG+R+  K  E +E+FSVIKTLK+I  ANVV+L++D
Sbjct: 241 PGTTRDSIYIPLIRNNREYIFIDTAGVRKSAKIKEKVERFSVIKTLKAIENANVVLLVID 300

Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
           A + +S QD+++ +FI  SGRSL++ VNKWD+I   +RK IKN++  +L F+ FA  +FI
Sbjct: 301 ANEGVSDQDLSLLSFILNSGRSLVITVNKWDAISSEKRKQIKNSLDLRLGFMDFARTHFI 360

Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
           SA+  + + +  +SI   YD S   ++TS +TR +  A + H P   +  R KL+YAH G
Sbjct: 361 SALHGSGVENLFKSIKEAYDCSTKRINTSLLTRIMQLAKEEHEPPLVRGRRVKLKYAHSG 420

Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDA 431
           G NP I+VIHGN++  I + YKRYL  YF R+  +I A
Sbjct: 421 GYNPLIVVIHGNQVTAINDSYKRYLMNYFRRSLKIIGA 458


>gi|398893854|ref|ZP_10646363.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM55]
 gi|398183476|gb|EJM70959.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM55]
          Length = 490

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/444 (43%), Positives = 283/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ E P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEAALS-EFPRDDDEPQEGEEEEIV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
            S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QIEKVPKSYVRYLENTYRRVLKLV 442


>gi|403051777|ref|ZP_10906261.1| GTP-binding protein Der [Acinetobacter bereziniae LMG 1003]
          Length = 469

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH- 178
            + +++  +L +FY+LG+G P  ++A +G G++  LE++LT ++P      + E  + H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLT-DIP------EDENEDEHD 172

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + +KY LIDTA
Sbjct: 173 QATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFSV+KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  YDSS + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYDSSHLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A   H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATDAHQPPMISGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|445414091|ref|ZP_21433816.1| ribosome-associated GTPase EngA [Acinetobacter sp. WC-743]
 gi|444764910|gb|ELW89215.1| ribosome-associated GTPase EngA [Acinetobacter sp. WC-743]
          Length = 469

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++LT ++P      + E  + H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLT-DIP------EDENEDEHD 172

Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + +KY LIDTA
Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFSV+KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  YDSS + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYDSSHLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A   H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATDAHQPPMISGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|422321705|ref|ZP_16402750.1| histidyl-tRNA synthetase [Achromobacter xylosoxidans C54]
 gi|317403339|gb|EFV83852.1| histidyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 431

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/366 (50%), Positives = 257/366 (70%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG++L++RPE TA ++R+ IE+NL+YD P+R++  GP+FRHE
Sbjct: 63   GEVTDIVEKEMYTFTDALNGESLTMRPEMTAGIVRASIEHNLLYDRPQRVYSIGPVFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAELI+M +RLWK L L ++ LELNS+G   ER  
Sbjct: 123  RPQRGRYRQFHQIDVEALGFAGPDVDAELIVMLARLWKLLGLTDVRLELNSLGQPAERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI +++KH D     ED K  LY N LRVLD+KN  ++E+  +AP+L D+L ++S 
Sbjct: 183  HRAALIAHLEKHVDI--LDEDGKRRLYTNPLRVLDTKNPAMQEMADSAPRLFDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LGSQ ++CGGGRYD LI+ 
Sbjct: 241  AHFDGVCQRLTDAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGSQGTVCGGGRYDGLIEL 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +CD+Y+VH G++A+  A  + E+LR  
Sbjct: 301  LGGKPAPAVGFAIGMERLLDLWEQ-SVQVEAPAECDVYVVHQGEDAQRLAARVGEDLRDA 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE-DPTL 1226
            GL V+++        SFKSQ KRA+AS A  A I+G +E+ + T  IK LR   + D   
Sbjct: 360  GLAVVVHAG----AASFKSQFKRADASGARVAVILGADEVASQTASIKFLRADAQGDGAQ 415

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 416  QQVPLA 421


>gi|421482985|ref|ZP_15930564.1| histidyl-tRNA ligase [Achromobacter piechaudii HLE]
 gi|400198789|gb|EJO31746.1| histidyl-tRNA ligase [Achromobacter piechaudii HLE]
          Length = 431

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/368 (48%), Positives = 256/368 (69%), Gaps = 8/368 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG++L++RPE TA ++R+ IE+N++YD P+R++  GP+FRHE
Sbjct: 63   GEVTDIVEKEMYTFTDALNGESLTMRPEMTAGIVRASIEHNMLYDRPQRVYSIGPVFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAELI+M +RLWK L LK++ LELNS+G   ER  
Sbjct: 123  RPQRGRYRQFHQIDVEALGFAGPDVDAELIVMLARLWKLLGLKDVRLELNSLGQPAERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI +++KH+D     ED +  LY N LRVLD+KN  ++E+  +AP+L D+L ++S 
Sbjct: 183  HRAALIEHLEKHRDI--LDEDGQRRLYTNPLRVLDTKNPAMQEMANSAPRLFDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y +N +LVRG+DYYN TVFEW TD+LGSQ ++CGGGRYD L++ 
Sbjct: 241  AHFDGVCQRLTDAGIEYSLNPRLVRGLDYYNLTVFEWVTDRLGSQGTVCGGGRYDGLVEL 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++Y+VH G+EA+  A  + E+LR  
Sbjct: 301  LGGKHAPAVGFAIGMERLLDLWEQ-SVQLEAPAECEVYVVHQGEEAQRLAARVGEDLRDA 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL V+++         FKSQ KRA+AS A  A I+G +E+ + T  +K LR   +    +
Sbjct: 360  GLSVVVHAG----SAGFKSQFKRADASGAKVAVILGADEVASQTASVKYLRADAQGDAAQ 415

Query: 1228 QISISFKD 1235
            Q  +  KD
Sbjct: 416  Q-QVPLKD 422


>gi|121997392|ref|YP_001002179.1| GTP-binding protein EngA [Halorhodospira halophila SL1]
 gi|166198720|sp|A1WUL5.1|DER_HALHL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|121588797|gb|ABM61377.1| small GTP-binding protein [Halorhodospira halophila SL1]
          Length = 472

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/431 (43%), Positives = 278/431 (64%), Gaps = 11/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M  V+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG         +++DTGG 
Sbjct: 1   MSAVIALVGRPNVGKSTLFNRLTGSRDALVADHPGLTRDRQYGIVRHQGGHAVVVDTGGM 60

Query: 61  EPEVKK--GIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
             E++   G MHE   Q + AI  +D ++F+VDG+ G    D+ I   LR++  P+ L +
Sbjct: 61  GEELEGVGGCMHE---QARAAIAGADAVVFLVDGQAGATVGDEEIAAELRRAQVPVFLAV 117

Query: 119 NKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
           NK++ +++ ++  DF+ LG+   H I+A  G G+   L+ +  +  P      + +    
Sbjct: 118 NKTDGLDAGVAAADFHGLGLQPVHAIAATRGRGVGELLDAVFALLPP-----AEPDAVGS 172

Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
                I VA++G+PNVGKSTL+N LLGE RV+ YD PGTTRDSI   FE + + Y LIDT
Sbjct: 173 DGPGGIPVAMIGRPNVGKSTLVNRLLGEERVVVYDEPGTTRDSIAVPFERDGQHYTLIDT 232

Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
           AG+RRR +  E +EKFSV+KTL++I  A+VV+L+ DAQ+ I+ QD ++A  + ++GR+L+
Sbjct: 233 AGVRRRARVQETVEKFSVVKTLEAIERASVVMLVTDAQEGITEQDAHLAGHVLQAGRALV 292

Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
           + +NKWD +  +QR+ ++ ++  +  FL FA  +F+SA+  + +   +ES+   + ++  
Sbjct: 293 LVINKWDGLDPDQRRKVRRDLDLRFAFLGFARHHFVSALHGSGVGLLLESVERAHAAAHR 352

Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
            L+T  +  AL  A+ NH P   +  R KLRYAHQGG NPP+IVIHGN+++ +   Y RY
Sbjct: 353 DLATPELNDALQEALANHQPPLSRGRRIKLRYAHQGGHNPPVIVIHGNQVQRLPRAYMRY 412

Query: 418 LEKYFYRTFSL 428
           LE +F  TF L
Sbjct: 413 LENFFRDTFDL 423


>gi|77460818|ref|YP_350325.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf0-1]
 gi|398978319|ref|ZP_10687694.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM25]
 gi|123603396|sp|Q3K7C0.1|DER_PSEPF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|77384821|gb|ABA76334.1| GTP-binding protein [Pseudomonas fluorescens Pf0-1]
 gi|398137119|gb|EJM26185.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM25]
          Length = 490

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/444 (43%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEAALS-DFPRDDDEPAEGEEEEVV 178

Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
               + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
            S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QIEKVPKSYVRYLENTYRRVLKLV 442


>gi|325272131|ref|ZP_08138563.1| GTP-binding protein Der [Pseudomonas sp. TJI-51]
 gi|324102727|gb|EGC00142.1| GTP-binding protein Der [Pseudomonas sp. TJI-51]
          Length = 487

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/441 (42%), Positives = 279/441 (63%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +SFI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKEAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +NI++ ++  +F  LG+GN   ++   G GI   +E +L   LP  +  +  +      
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINALMEAVLG-HLPRDQVEEALDADVAEG 178

Query: 180 IEY-----------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
            E            IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERD 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
            +KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             E+GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMQPGERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
              + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+ +
Sbjct: 359 QAAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTE 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            I   Y RYLE  + R   L+
Sbjct: 419 KIPKSYSRYLENTYRRVLKLV 439


>gi|339485854|ref|YP_004700382.1| GTP-binding protein EngA [Pseudomonas putida S16]
 gi|431800912|ref|YP_007227815.1| GTP-binding protein Der [Pseudomonas putida HB3267]
 gi|338836697|gb|AEJ11502.1| GTP-binding protein EngA [Pseudomonas putida S16]
 gi|430791677|gb|AGA71872.1| GTP-binding protein Der [Pseudomonas putida HB3267]
          Length = 487

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/441 (42%), Positives = 278/441 (63%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +SFI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDATWQGRSFILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKEAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            +NI++ ++  +F  LG+GN   ++   G GI   +E +L   LP  +  +  +      
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINALMEAVLG-HLPRDQVEEALDAEVAEG 178

Query: 180 IEY-----------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
            E            IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERD 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
           ++KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 DEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             E+GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +    +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMEPGERDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
              + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+  
Sbjct: 359 QAAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTD 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            I   Y RYLE  + R   L+
Sbjct: 419 KIPKSYSRYLENTYRRVLKLV 439


>gi|422643978|ref|ZP_16707117.1| GTP-binding protein Der [Pseudomonas syringae pv. maculicola str.
           ES4326]
 gi|330957531|gb|EGH57791.1| GTP-binding protein Der [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 489

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/443 (43%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M KQ+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAKQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            +NI+ +++  +F  +G+G+   ++  +G GI   LE  L+ E P  +            
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLEIALS-EFPKDEDELEEGEVEEVA 178

Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
              + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +
Sbjct: 299 GFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLYQ 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 VEKVPKSYVRYLENTYRRVLKLV 441


>gi|335420579|ref|ZP_08551617.1| GTP-binding protein Der [Salinisphaera shabanensis E1L3A]
 gi|334894938|gb|EGM33123.1| GTP-binding protein Der [Salinisphaera shabanensis E1L3A]
          Length = 446

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/428 (42%), Positives = 277/428 (64%), Gaps = 10/428 (2%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
           PVL LVGRPNVGKSTLFNRLT +RDALVA+ PG+TRDRHYG      + +I++DTGG   
Sbjct: 2   PVLALVGRPNVGKSTLFNRLTRTRDALVADQPGVTRDRHYGFASYDGQRYIVVDTGGIGQ 61

Query: 63  EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
           +  + I  +   QT+ A+ E+D+++F+VD RQGL+  D++I   LR+  +P+ +V+NKSE
Sbjct: 62  D-DEDIDSQALAQTRAALEEADVVLFVVDSRQGLMGGDEMIAEQLRRIDRPVHVVVNKSE 120

Query: 123 -NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIHSI 180
             + ++   +F+ L  G+P  +SA++G+ I   L ++   +  P  +          H  
Sbjct: 121 GQVGATAVAEFHALAFGDPWAVSAIHGDRISILLAHVFEHLPAPRAQVLP-------HQR 173

Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
             I++A++G+PN GKSTL+N LLGE R++T D PGTTRD++ S F +++K Y+++DTAGI
Sbjct: 174 GAIRLALLGRPNAGKSTLVNRLLGETRMLTQDAPGTTRDAVASEFSFDDKPYVIVDTAGI 233

Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
           RRR +  + +EK SV+K ++++  A VVI++LDA   +SAQDI + N   E GR++++ V
Sbjct: 234 RRRARIDDDVEKVSVVKAMQAMEAAQVVIVMLDAASGLSAQDIRLLNMAVERGRAVVIAV 293

Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
           NKWD +   QR+ +   + K++    +    FISA+  + +   M++I   + ++   LS
Sbjct: 294 NKWDGLEGKQREKLHAELVKRIGAFDYLPLLFISALHGSGLRDLMDAIQASHKAAFAELS 353

Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
           T+ ++R L  A+  H P      R KLRYAHQGG+NPP IVIHGN+ + + ++YKRYL +
Sbjct: 354 TNALSRTLEDAVDGHSPPAIHGRRIKLRYAHQGGRNPPTIVIHGNQTQRVSDEYKRYLMR 413

Query: 421 YFYRTFSL 428
            F   F L
Sbjct: 414 RFREKFDL 421


>gi|319941511|ref|ZP_08015838.1| histidyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804985|gb|EFW01824.1| histidyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 445

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/371 (48%), Positives = 253/371 (68%), Gaps = 7/371 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D +NGD L+LRPE T++V+R+V E+NL+Y   +RLWY GPMFRHE
Sbjct: 71   GEVTDIVEKEMYSFTDSMNGDQLTLRPECTSAVVRAVNEHNLLYGTTQRLWYCGPMFRHE 130

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+G  GPDIDAE+I+M +R+WK L +  + LE+N++G   ER+K
Sbjct: 131  RPQRGRYRQFHQLGAEALGMAGPDIDAEIIMMLARMWKALGVGPVKLEMNTLGAQEERQK 190

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y + HKD     ED    LY N LR+LD+KN  ++ ++  APKLLDYL ++S 
Sbjct: 191  HREALIAYFEAHKDQ--LDEDALRRLYTNPLRILDTKNPDMQGLVDAAPKLLDYLGEESR 248

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
                 ++++++   I Y IN +LVRG+DYYN TVFEW TDKLG+Q +ICGGGRYD L++ 
Sbjct: 249  AFLSRLEELVSSAGIEYSINPRLVRGLDYYNHTVFEWITDKLGAQGTICGGGRYDPLVEM 308

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               +  P  GFA+G+ER+IEL++++      S Q D+Y++H G E++ KA +L+E +R  
Sbjct: 309  LGGRPAPGVGFAMGMERVIELMREVGQVPKAS-QTDVYVLHHGGESQAKAMLLAETMRDR 367

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            G++V    V +    S KSQMK+A+AS A FA    E+E+   T+ IK LR     P  +
Sbjct: 368  GIRV----VTHPGEASIKSQMKKADASGAEFAVFATEDELAQGTVGIKALRAHEHAPFAE 423

Query: 1228 QISISFKDAEN 1238
            Q  ++  +A +
Sbjct: 424  QTLVATAEAAD 434


>gi|388456391|ref|ZP_10138686.1| GTP-binding protein Der [Fluoribacter dumoffii Tex-KL]
          Length = 466

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/431 (47%), Positives = 291/431 (67%), Gaps = 12/431 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT ++DALVA++PGLTRDR YG+     K +I++DTGG 
Sbjct: 1   MIPVIALVGRPNVGKSTLFNRLTKTQDALVADFPGLTRDRQYGQAQHENKHYIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             +    +   M+KQ++ A+ E+DI++F+VDGR GL   D+ I + LRK  + + LV+NK
Sbjct: 61  GVD-DIAVDTLMSKQSEIALNEADIVLFLVDGRAGLTGIDEKIASNLRKLNKKVHLVVNK 119

Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
           +E ++  +   DF+ LGI + H IS+ +G+GI+  L+ +L+   P+     + E  N   
Sbjct: 120 TEGLDDDVVCADFHALGIADVHSISSSHGSGIRTLLDEVLS---PFSTQSDEIEENN--- 173

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              IK+A  G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI   F  + +KY+LIDTAG
Sbjct: 174 --AIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSIAIPFVRDEQKYMLIDTAG 231

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+++  E IEKFSVIKTL++I E+NV + LLDA + I+ QD+N+  FI ESG++L++ 
Sbjct: 232 VRRKSRIDEKIEKFSVIKTLQAIEESNVCLQLLDASEGITDQDLNLLGFIIESGKALVIA 291

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           VNKWD +    ++ +K+ + ++L F +FA   FISA+  + + +  + IN  Y+S++   
Sbjct: 292 VNKWDGLDEEHKEQVKSELSRRLQFANFAKIRFISALHGSGVGNLFKDINEAYESAVQSF 351

Query: 360 STSRITRALIS-AIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           ST R+TR L   + K+ PPC     R KLRYAH GG NPP+IVIHGN+L  + + YKRYL
Sbjct: 352 STPRLTRLLQDISTKHTPPCVNGR-RIKLRYAHLGGHNPPVIVIHGNQLADLPDSYKRYL 410

Query: 419 EKYFYRTFSLI 429
              F +   LI
Sbjct: 411 SNEFIKHLGLI 421


>gi|398845263|ref|ZP_10602304.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM84]
 gi|398253715|gb|EJN38831.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM84]
          Length = 487

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/440 (42%), Positives = 282/440 (64%), Gaps = 12/440 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKSAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENIL-------TIELPYKKFFKKK 172
            +NI++ ++  +F  LG+GN   ++   G GI   +E++L         E   ++  + +
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINQLMESVLGHIPRDAEEEALDQEVAEGE 179

Query: 173 EFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
           E   I      + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE + 
Sbjct: 180 EAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERDG 239

Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
           +KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F 
Sbjct: 240 EKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299

Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
            E+GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +S+ 
Sbjct: 300 LEAGRAIVIALNKWDGMEPGERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSVQ 359

Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
             + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+ + 
Sbjct: 360 AAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTEK 419

Query: 410 IGNDYKRYLEKYFYRTFSLI 429
           I   Y RYLE  + R   L+
Sbjct: 420 IPKSYSRYLENTYRRVLKLV 439


>gi|392547034|ref|ZP_10294171.1| GTP-binding protein Der [Pseudoalteromonas rubra ATCC 29570]
          Length = 490

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/450 (43%), Positives = 283/450 (62%), Gaps = 22/450 (4%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+       FI++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYEFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           +   ++GI  EM +Q+  AI E+D+++F+VD R G+   D+ I   LRK  +   +V NK
Sbjct: 61  DGS-EEGIETEMAEQSLLAIEEADVVLFLVDARAGMTAADQAIAQHLRKQQKKSFVVANK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT------------------- 160
           ++ I++ S   +FY+L +G  + I+A +G G+   LE  L                    
Sbjct: 120 TDGIDADSNCAEFYQLALGEVYHIAAAHGRGVTQLLEATLGPVIAELASEEDEIEQDDEL 179

Query: 161 -IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
             EL  +     +E       + IK+AI+G+PNVGKSTL N +LGE RVI YD PGTTRD
Sbjct: 180 LTELYLEGEEAPEEGKTGFEDKPIKLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTTRD 239

Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
           SI      N + Y+LIDTAG+R+R K  +V+EKFSVIKTLK+I +ANV++L++DA+  IS
Sbjct: 240 SIYIPMTRNERDYVLIDTAGVRKRKKVSDVVEKFSVIKTLKAIEDANVILLVIDARDGIS 299

Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
            QD+++  F   +GRSL++ VNKWD +    ++ IK+ + ++L F+ FA  +FISA+   
Sbjct: 300 DQDLSLLGFALNAGRSLVIAVNKWDGLDDYVKERIKSELDRRLGFIDFARLHFISALHGT 359

Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
            +    ES+   Y+S+   +ST+ + R +  A  +H P   +  R KL+YAH GG NPP 
Sbjct: 360 GVGHLFESVEEAYESATKRVSTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNPPR 419

Query: 400 IVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           IVIHGN++  + + YKRYL  Y+ +  +++
Sbjct: 420 IVIHGNQVHDLPDSYKRYLMNYYRKALNIM 449


>gi|149908865|ref|ZP_01897525.1| GTP-binding protein EngA [Moritella sp. PE36]
 gi|149808139|gb|EDM68080.1| GTP-binding protein EngA [Moritella sp. PE36]
          Length = 493

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/453 (42%), Positives = 284/453 (62%), Gaps = 25/453 (5%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+  +  + FI++DTGG 
Sbjct: 1   MTPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANLAGREFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI  +M  Q+  AI E+D ++F+VD R GL+  D+ I   LRK  + + LV NK
Sbjct: 61  NGD-EEGIDAKMADQSLLAIEEADAVLFMVDARAGLMVADQAIAEHLRKQQKKVFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-----IELPYKKFFKKKEF 174
            + ++  +++ +FY L +G+ + I+A  G GI   +E  L           ++F     F
Sbjct: 120 VDGLDGDVAVAEFYALALGDIYQIAASQGRGINILIEEALAHVEVADAEDEEEFSDADPF 179

Query: 175 TNIHSI--------------EY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
            N   +              +Y    IK+A++G PNVGKSTL+N +LGE RV+ YD PGT
Sbjct: 180 VNGELLPEEEEGEEDEQTAEDYARLPIKLAMIGCPNVGKSTLVNRILGEERVVVYDMPGT 239

Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
           TRDSI    E   + Y+LIDTAG+RRR    E +EKFS++K L++I +ANVV+++LDA+ 
Sbjct: 240 TRDSIYIPMERAGRNYMLIDTAGVRRRKNINEAVEKFSIVKALQAIDDANVVLMVLDARV 299

Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
            +++QD+ +  F   SGRS+++ +NKWD +    +  IK+ + ++L F+ FA  +FISA+
Sbjct: 300 GVTSQDLTLLGFAINSGRSIVIAINKWDGLDAGVKDRIKSELDRRLGFIDFARIHFISAL 359

Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
               + +  ESI   +DSS   +STS +TR +  A+ +H P      R KLRYAH GG N
Sbjct: 360 HGTGVGNLFESITEAFDSSTKRVSTSMLTRIVRMAVDDHQPPMHAGRRVKLRYAHAGGYN 419

Query: 397 PPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
           PP+IV+HGN++  +   Y+RYL  YF R+  ++
Sbjct: 420 PPLIVVHGNQVTKLSGSYRRYLINYFRRSLKIM 452


>gi|26987593|ref|NP_743018.1| GTP-binding protein EngA [Pseudomonas putida KT2440]
 gi|37999649|sp|Q88PJ3.1|DER_PSEPK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|24982270|gb|AAN66482.1|AE016277_1 GTP-binding protein EngA [Pseudomonas putida KT2440]
          Length = 487

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/441 (42%), Positives = 279/441 (63%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +SFI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY--------KKFFKK 171
            +NI+  ++  +F  +G+GN   ++   G GI   +E +L   LP         +   + 
Sbjct: 120 IDNIDPDVARAEFSPMGMGNAIPVAGSQGRGINALMEAVLG-HLPRDAEEEALEQDVAEG 178

Query: 172 KEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
           +E   I      + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERD 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
            +KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             E+GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
              + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+  
Sbjct: 359 QAAFQSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPLIVIHGNQTD 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            I   Y RYLE  + R   L+
Sbjct: 419 SIPKSYSRYLENTYRRVLKLV 439


>gi|400405781|ref|YP_006588640.1| ribosome-associated GTPase EngA [secondary endosymbiont of
           Ctenarytaina eucalypti]
 gi|400364144|gb|AFP85212.1| ribosome-associated GTPase EngA [secondary endosymbiont of
           Ctenarytaina eucalypti]
          Length = 492

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/459 (44%), Positives = 295/459 (64%), Gaps = 34/459 (7%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGR NVGKSTLFNRLT + DALVA++PGLTRDR+YG        FI+IDTGG 
Sbjct: 1   MLPVIALVGRQNVGKSTLFNRLTRTHDALVADFPGLTRDRNYGHAKWAGNEFIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
           + + ++G+   +  Q+  AI E+DI++F+VDGR G++  D++I   LR+  +  +LV+NK
Sbjct: 61  DGK-EEGVEIHVAGQSLSAIEEADIVLFMVDGRAGMMAGDQVIAKHLRRRQKTTLLVVNK 119

Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
           ++ I+  SI  DFY LG+ +   I+A  G GI + LE ++   LP++K            
Sbjct: 120 TDGIHIDSIVGDFYSLGLAHIVPIAASQGQGISSLLEQVI---LPFQKNNLLADEAGEDA 176

Query: 168 -----------FFKKKEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
                        K+KE T   +     IK+AIVG+PNVGKSTLIN +LGE RV+ YD P
Sbjct: 177 HSPWPEDAAEALPKEKEQTQHFNPRMLPIKLAIVGRPNVGKSTLINRILGEQRVVVYDMP 236

Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
           GTTRDS+     +  +KYILIDTAG+R+R +  E ++KFS+IKTLK+I +ANVV+LL+DA
Sbjct: 237 GTTRDSLYIPMVHKTQKYILIDTAGVRKRGQVTETVDKFSIIKTLKAIGDANVVLLLIDA 296

Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
              I+ QD+++ +FI   GRSL++ VNKWD + +N R  IK  + ++L F+ FA  ++IS
Sbjct: 297 LVGIADQDLSLLSFILNRGRSLVIAVNKWDDLSNNTRNNIKKVLDQRLGFIDFARVHYIS 356

Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPP--CRKKLIRPKLRYAHQ 392
           A+  + +   +ES+N  Y  +   +S + +TR +  A+  H P   R + I+PK  YAH 
Sbjct: 357 ALHGSGVEYLLESVNAAYQCATTRVSAALLTRIMCMAVGEHQPPLVRGRRIKPK--YAHP 414

Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDA 431
           GG NPP+IVIHG+++  + + YK+YL  YF R+  +I A
Sbjct: 415 GGYNPPLIVIHGSQVNDLPHSYKKYLINYFRRSLKIIGA 453


>gi|167031915|ref|YP_001667146.1| GTP-binding protein EngA [Pseudomonas putida GB-1]
 gi|189037155|sp|B0KPJ1.1|DER_PSEPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|166858403|gb|ABY96810.1| small GTP-binding protein [Pseudomonas putida GB-1]
          Length = 487

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/441 (42%), Positives = 281/441 (63%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +SFI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDATWQGRSFILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKSAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY--------KKFFKK 171
            +NI+  ++  +F  +G+GN   ++   G GI   +E +L   LP         ++  + 
Sbjct: 120 IDNIDPDVARAEFSPMGMGNAIPVAGSQGRGINALMEAVLG-HLPRDAEDEALDQEVAEG 178

Query: 172 KEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
           +E   I      + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERD 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
            +KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             E+GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
              + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+ +
Sbjct: 359 QAAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTE 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            I   Y RYLE  + R   L+
Sbjct: 419 SIPKSYSRYLENTYRRVLKLV 439


>gi|386010520|ref|YP_005928797.1| protein EngA [Pseudomonas putida BIRD-1]
 gi|313497226|gb|ADR58592.1| EngA [Pseudomonas putida BIRD-1]
          Length = 487

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/441 (42%), Positives = 279/441 (63%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +SFI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY--------KKFFKK 171
            +NI+  ++  +F  +G+GN   ++   G GI   +E +L   LP         +   + 
Sbjct: 120 IDNIDPDVARAEFSPMGMGNAIPVAGSQGRGINALMEAVLG-HLPRDAEDEALEQDVAEG 178

Query: 172 KEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
           +E   I      + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERD 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
            +KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             E+GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
              + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+  
Sbjct: 359 QAAFQSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPLIVIHGNQTD 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            I   Y RYLE  + R   L+
Sbjct: 419 SIPKSYSRYLENTYRRVLKLV 439


>gi|148546131|ref|YP_001266233.1| GTP-binding protein EngA [Pseudomonas putida F1]
 gi|395447295|ref|YP_006387548.1| GTP-binding protein EngA [Pseudomonas putida ND6]
 gi|397696921|ref|YP_006534804.1| GTP-binding protein engA [Pseudomonas putida DOT-T1E]
 gi|421524495|ref|ZP_15971117.1| GTP-binding protein Der [Pseudomonas putida LS46]
 gi|166225843|sp|A5VYT9.1|DER_PSEP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|148510189|gb|ABQ77049.1| small GTP-binding protein [Pseudomonas putida F1]
 gi|388561292|gb|AFK70433.1| GTP-binding protein EngA [Pseudomonas putida ND6]
 gi|397333651|gb|AFO50010.1| GTP-binding protein engA [Pseudomonas putida DOT-T1E]
 gi|402751674|gb|EJX12186.1| GTP-binding protein Der [Pseudomonas putida LS46]
          Length = 487

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/441 (42%), Positives = 278/441 (63%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +SFI+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY--------KKFFKK 171
            +NI+  ++  +F  +G+GN   ++   G GI   +E +L   LP         +   + 
Sbjct: 120 IDNIDPDVARAEFSPMGMGNAIPVAGSQGRGISALMEAVLG-HLPRDAEDEALEQDVAEG 178

Query: 172 KEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
           +E   I      + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERD 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
             KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 GDKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             E+GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
              + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+  
Sbjct: 359 QAAFQSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPLIVIHGNQTD 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            I   Y RYLE  + R   L+
Sbjct: 419 SIPKSYSRYLENTYRRVLKLV 439


>gi|386826410|ref|ZP_10113517.1| ribosome-associated GTPase EngA [Beggiatoa alba B18LD]
 gi|386427294|gb|EIJ41122.1| ribosome-associated GTPase EngA [Beggiatoa alba B18LD]
          Length = 464

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/430 (43%), Positives = 281/430 (65%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M P + +VGRPNVGKSTLFN LT SRDALVA   GLTRDR  G G +G   +++IDTGG 
Sbjct: 1   MLPTIAIVGRPNVGKSTLFNVLTKSRDALVAEQAGLTRDRKVGRGKVGGMPYLVIDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             +   GI   +T+Q  QAI E++ ++F+VDGR GL   D++I   LR    P+ LVINK
Sbjct: 61  T-DASDGIATRITQQALQAIQEANKVLFVVDGRDGLTAIDEMIAQRLRSFNIPVHLVINK 119

Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
           +E + S  +++DF+ LG    H ISA +  GI+  +E +L+   +P +    + E     
Sbjct: 120 TEGMQSELVNIDFHRLGFSPVHTISASHQRGIEAMMETVLSDFSVPEESEMDEAEAG--- 176

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               IK+AIVG+PNVGKSTL+N +LG  RVI YD PGTTRDSI   FE + +KY LIDTA
Sbjct: 177 ----IKIAIVGRPNVGKSTLVNRILGYERVIAYDQPGTTRDSIFIPFERDGQKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RRR +  +V+EK+SV+K L+++  A+VVI+++DA++ ++ QD ++   + +SGR+LI+
Sbjct: 233 GVRRRARIADVVEKYSVLKALQAVEAAHVVIMIIDAREGMTDQDASLLGNVLDSGRALII 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +   +R+ ++  + +KL+F+ FA  +FISA+    +    +S+N  + ++  H
Sbjct: 293 AVNKWDGLTQTEREQVRYTLTRKLHFIDFAEIHFISALHGTGVGHLYKSVNIAWTAAHKH 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +ST  +   L  AI  +PP      R K+RY HQGG++PP+ VIHG+++  + + Y+RYL
Sbjct: 353 ISTPLLNDVLKDAITRNPPPLSHGRRIKMRYIHQGGQHPPLFVIHGSQVDSVPDAYQRYL 412

Query: 419 EKYFYRTFSL 428
            ++F  TF L
Sbjct: 413 IRFFRDTFDL 422


>gi|398874318|ref|ZP_10629529.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM74]
 gi|398195387|gb|EJM82434.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM74]
          Length = 489

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/443 (43%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEIALS-DFPKDDDELEEGEEEDVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|325981898|ref|YP_004294300.1| histidyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531417|gb|ADZ26138.1| histidyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 424

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/363 (51%), Positives = 257/363 (70%), Gaps = 12/363 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+FID LN D+L+LRPEGTAS +R+ IE+NL+Y GP+RL+Y+GPMFRHE
Sbjct: 57   GEVTDIVEKEMYTFIDHLNNDSLTLRPEGTASCVRAAIEHNLLYAGPQRLYYAGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+G+ GPDIDAELI+MC RLW+ L + ++ LE++++GN   R  
Sbjct: 117  RPQRGRYRQFHQVGVEALGYAGPDIDAELIVMCVRLWELLGISDLRLEISTLGNTESRAL 176

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   L+ Y ++H+D+    ED    LY+N LR+LDSKN  +++I+ NAPKL+D L+ +S 
Sbjct: 177  HRSRLLKYFERHRDN--LDEDSLRRLYVNPLRILDSKNPEMQQIIENAPKLIDDLDPESC 234

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q+IL    I+Y IN +LVRG+DYYNRTVFEW TDKLG+Q ++C GGRYD L+++
Sbjct: 235  GHFESLQRILRERGINYNINLRLVRGLDYYNRTVFEWVTDKLGAQGTVCAGGRYDGLVEQ 294

Query: 1108 FSNKFVPASGFAIGIERLIELIKKIN--INHNFSHQCDIYIVHVGKEAELK-AFVLSENL 1164
               K  PA GFA+G+ERL+ L+++    I        D+YI + G E  +  A+  +E L
Sbjct: 295  VGGKPTPACGFAMGVERLLSLMQEYGKKIQQPVP---DVYIAYQGDEQVMDYAWKCAEFL 351

Query: 1165 RTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDP 1224
            R  G  VIL+C       SFKSQMK+A++S A +A IIG +E     + IK LR+  E  
Sbjct: 352  RDEGFDVILHCGGG----SFKSQMKKADSSGAVYALIIGNDEFRAQQVTIKPLRDLIEQV 407

Query: 1225 TLK 1227
            +LK
Sbjct: 408  SLK 410


>gi|398911097|ref|ZP_10655358.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM49]
 gi|398184707|gb|EJM72143.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM49]
          Length = 489

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/443 (43%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEIALS-DFPKDEDELEEGEEEDVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  ESGR+L++ +NKWD +  ++R  +K  ++++L F+ +A  +FISA+    + +   
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|292491215|ref|YP_003526654.1| histidyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579810|gb|ADE14267.1| histidyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 421

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/361 (49%), Positives = 251/361 (69%), Gaps = 6/361 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D  NGD+L+LRPEGTA  +RSV+++ L+  GP+RLWY G MFRHE
Sbjct: 56   GEVTDIVEKEMYTFTDR-NGDSLTLRPEGTAGCVRSVLQHGLLTQGPQRLWYYGAMFRHE 114

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIGVE +G  GPD+D ELI+M +R W+ L L+ + L+LNS+G+   R  
Sbjct: 115  RPQKGRYRQFFQIGVEVLGPKGPDVDVELILMTARFWRQLGLEGLRLQLNSLGSPAARAT 174

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            Y   L+++   H+D     ED +  L+ N LR+LDSKN  ++EI+  AP+LLDYL+KDS 
Sbjct: 175  YRERLVDFFTDHQDC--LDEDSRRRLHSNPLRILDSKNPALQEIIEQAPRLLDYLDKDSR 232

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
            DHF  +Q +L+   I+Y+IN +LVRG+DYY RTVFEW +D+LGSQ ++C GGR+D L+++
Sbjct: 233  DHFEALQDLLDSAGIAYEINPRLVRGLDYYTRTVFEWVSDQLGSQGTVCAGGRFDGLVEQ 292

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               +  PA GFA+G+ERLI L+ +       +   D+Y+V VG +AE ++ +L+E+LR  
Sbjct: 293  LGGQPTPAVGFALGLERLITLLGEQGCLKEPAI-VDLYVVAVGPQAEHQSLLLAEHLREA 351

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
               V L   +     SFKSQ+KRA+ S A +A I+GE+E++  T+ +KDLR      ++ 
Sbjct: 352  VPGVRLQVNYGG--GSFKSQLKRADRSGARWALILGEDEVVQGTVSVKDLRKAQPQQSMP 409

Query: 1228 Q 1228
            Q
Sbjct: 410  Q 410


>gi|114332136|ref|YP_748358.1| radical SAM protein [Nitrosomonas eutropha C91]
 gi|122313183|sp|Q0AE39.1|RLMN_NITEC RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|114309150|gb|ABI60393.1| 23S rRNA m(2)A-2503 methyltransferase [Nitrosomonas eutropha C91]
          Length = 379

 Score =  376 bits (966), Expect = e-101,   Method: Composition-based stats.
 Identities = 181/365 (49%), Positives = 246/365 (67%), Gaps = 15/365 (4%)

Query: 523 DFAESIDKNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPH 582
           DF ++   +   E+GE P+RA+QL +W+H+FG ++F +M+DL+ + R+KL     +  P 
Sbjct: 6   DFNKTGLIHFCEEMGEKPYRARQLLRWVHRFGKTEFIEMSDLAKTFRQKLMERAVVHPPE 65

Query: 583 IMSDQISFDGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFV 641
           I+SD  + DGTRKW+      N +E VFIPE NR TLC+S+QVGCA+ C FCSTGRQGF 
Sbjct: 66  IISDHTAGDGTRKWLLSTGTGNAVEMVFIPEPNRGTLCVSSQVGCALACSFCSTGRQGFN 125

Query: 642 RNLTVGEIIGQLW---------VTEFKLRREKNIKI-NSQGKRQITNIVMMGMGEPLLNY 691
           RNL+V EIIGQLW         V E        I+  N+  +R +TN+VMMGMGEPL N+
Sbjct: 126 RNLSVAEIIGQLWWANRLLEGQVGELFSPDVAQIRADNTDTRRPVTNVVMMGMGEPLANF 185

Query: 692 KSTIGALKLILSDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKL 751
           ++ + AL L+LSD AYGLSRR V +STSG++P +D+L + CPV LAVSLHA N+ LR++L
Sbjct: 186 ENVVTALDLMLSDDAYGLSRRRVTVSTSGLVPALDRLRERCPVALAVSLHAPNDALRDQL 245

Query: 752 VPISKKYPLKELILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTS 811
           VPI+KKYP+++L+ AC RY+  +PR  ITFEY ML  +ND+   A EL+ ++R       
Sbjct: 246 VPINKKYPIRDLLAACERYLPAAPRDFITFEYVMLRDVNDSIALARELVQVVRN----IP 301

Query: 812 CKINLIPFNCFPNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEET 871
           CK+NLIPFN F  S    S    I  F  +LM +GI  T+RK RG+DI AACGQL+G+  
Sbjct: 302 CKLNLIPFNTFAGSGYERSNTDAIDNFRDVLMQAGIVTTVRKTRGDDIAAACGQLAGQVK 361

Query: 872 DIVKK 876
           D  ++
Sbjct: 362 DKTRR 366


>gi|389808186|ref|ZP_10204596.1| GTP-binding protein Der [Rhodanobacter thiooxydans LCS2]
 gi|388443064|gb|EIL99223.1| GTP-binding protein Der [Rhodanobacter thiooxydans LCS2]
          Length = 467

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/430 (44%), Positives = 279/430 (64%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG   IG++ F+++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRIGERPFVVVDTGGL 60

Query: 61  EPEVKKGIMHEMT-KQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
                +  M  +T KQ + AI E+D+++F+VD R GL+ QD  I   LR+SG+PIV V+N
Sbjct: 61  SG--TEDAMDVLTAKQVRLAIAEADVLVFVVDARDGLLPQDDAILAELRRSGKPIVAVVN 118

Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K++ ++  ++  +F+  GIG    +SA +  G  +FL  +L + LP  +    +      
Sbjct: 119 KTDGLDEQAVMAEFFAFGIGATLPLSAAHNRGTDDFLRVLLPL-LPADREPATETGDEDG 177

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
           SI   +VAIVG+PN GKSTLIN LLGE R+I  D  GTTRD I+   E + K+Y LIDTA
Sbjct: 178 SI---RVAIVGRPNAGKSTLINRLLGEERLIVSDVAGTTRDPIRVPLERDGKRYTLIDTA 234

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           GIRR+ +  E +EKFSVIKTL+SI  A V ++++DA++N++ QD+ +  +  + GR+L++
Sbjct: 235 GIRRKARVEEAVEKFSVIKTLQSIAAAQVAVVMIDARENLADQDLTLIGYAIDEGRALVI 294

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD +   QR   +  + ++L F+ +A    ISA+  + +   M ++   + S+   
Sbjct: 295 AINKWDDMDAYQRDECRRALDRRLVFVDWAKQVQISALHGSGLRELMRAVVRAHASATRE 354

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           L +S +T+AL  A +++ P       PKLR+AH GG NPP IVIHG+R K+I   Y+RYL
Sbjct: 355 LVSSDLTKALEKAYESYQPPLVNGHAPKLRFAHPGGTNPPTIVIHGSRTKHIAPAYQRYL 414

Query: 419 EKYFYRTFSL 428
           E +F + + L
Sbjct: 415 ENFFRKRYKL 424


>gi|374852466|dbj|BAL55398.1| histidyl-tRNA synthetase [uncultured beta proteobacterium]
          Length = 435

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/351 (50%), Positives = 242/351 (68%), Gaps = 7/351 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG++L+LRPEGTA  +R+ IE+NL++ GP+RL+Y GPMFRHE
Sbjct: 58   GEVTDIVEKEMYAFEDALNGEHLTLRPEGTAGCVRAAIEHNLLHQGPQRLYYWGPMFRHE 117

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIGVEA+GF  P+IDAELI+M +RLW +L L ++ LE+NS+G+  ER  
Sbjct: 118  RPQKGRYRQFHQIGVEALGFADPEIDAELIVMGARLWDDLGLTDVRLEINSLGDPEERAA 177

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y   H++     ED +  L  N LR+LDSKN  ++ ++  AP+LLDYL  ++ 
Sbjct: 178  HREALIAYFTAHQEE--LDEDSRRRLTRNPLRILDSKNPAMQPLIEGAPRLLDYLGAETR 235

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +  ++    I Y+IN +LVRG+DYYNRTVFEW T KLG+Q +IC GGRYD L  +
Sbjct: 236  AHFDAVLALIEAAGIPYRINPRLVRGLDYYNRTVFEWVTPKLGAQGTICAGGRYDGLFAQ 295

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA+GFA+G+ER++ L +          + D+Y+VH G+ +   AF L+E LR+ 
Sbjct: 296  LGGKPAPAAGFALGVERVLALWEACG-GEPPRPELDVYLVHQGEGSASAAFRLAEALRSS 354

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR 1218
            G  V+++        SFKSQMKRA+AS A  A I+GE+E+ + T  +K LR
Sbjct: 355  GFSVVVHAGGG----SFKSQMKRADASGAEVAVILGESELASETATVKPLR 401


>gi|422665491|ref|ZP_16725363.1| GTP-binding protein Der [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|424066445|ref|ZP_17803911.1| GTP-binding protein EngA [Pseudomonas syringae pv. avellanae str.
           ISPaVe013]
 gi|424071097|ref|ZP_17808524.1| GTP-binding protein EngA [Pseudomonas syringae pv. avellanae str.
           ISPaVe037]
 gi|440720318|ref|ZP_20900737.1| GTP-binding protein Der [Pseudomonas syringae BRIP34876]
 gi|440726446|ref|ZP_20906700.1| GTP-binding protein Der [Pseudomonas syringae BRIP34881]
 gi|330975909|gb|EGH75975.1| GTP-binding protein Der [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|407999556|gb|EKG39938.1| GTP-binding protein EngA [Pseudomonas syringae pv. avellanae str.
           ISPaVe037]
 gi|408002294|gb|EKG42553.1| GTP-binding protein EngA [Pseudomonas syringae pv. avellanae str.
           ISPaVe013]
 gi|440366354|gb|ELQ03438.1| GTP-binding protein Der [Pseudomonas syringae BRIP34876]
 gi|440366607|gb|ELQ03686.1| GTP-binding protein Der [Pseudomonas syringae BRIP34881]
          Length = 490

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P  +            
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDELEEGAEVEEV 178

Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
               + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|410089057|ref|ZP_11285686.1| GTP-binding protein Der [Pseudomonas viridiflava UASWS0038]
 gi|409763716|gb|EKN48670.1| GTP-binding protein Der [Pseudomonas viridiflava UASWS0038]
          Length = 489

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 282/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P  +            
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDDQEDAEVEEVA 178

Query: 168 -FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
              + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +
Sbjct: 299 GFALEAGRALVIALNKWDGMTPGERDYVKVELERRLFFVDFADIHFISALHGTGVGNLYQ 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 VEKVPKSYVRYLENTYRRVLKLV 441


>gi|70732274|ref|YP_262030.1| GTP-binding protein Der [Pseudomonas protegens Pf-5]
 gi|123653208|sp|Q4K6V3.1|DER_PSEF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|68346573|gb|AAY94179.1| ribosome-associated GTPase EngA [Pseudomonas protegens Pf-5]
          Length = 490

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 284/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   ++ NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKTSYVIANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ E P               
Sbjct: 120 VDNIDPDMARAEFAPLGMGDAIPIAGAHGRGITQMLEIALS-EFPKDDADEPEEGEEEIV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMQPSERDYVKTELQRRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|404403289|ref|ZP_10994873.1| GTP-binding protein Der [Pseudomonas fuscovaginae UPB0736]
          Length = 490

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/444 (43%), Positives = 281/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT SRDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRSYIVIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            +NI+  ++  +F  +G+G+   I+  +G GI   LE  L+ + P     +         
Sbjct: 120 IDNIDPDMARAEFSPMGLGDAIPIAGAHGRGITQMLEVALS-DFPRDDEEEPPEGEEEEV 178

Query: 172 ------KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
                 K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  ESGR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALESGRAIVIALNKWDGMTPGERDYVKTELERRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|389704833|ref|ZP_10185937.1| GTP-binding protein Der [Acinetobacter sp. HA]
 gi|388611077|gb|EIM40186.1| GTP-binding protein Der [Acinetobacter sp. HA]
          Length = 470

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/429 (44%), Positives = 291/429 (67%), Gaps = 8/429 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+D+IIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAIHEADMIIFVVDARAGLLASDEQIARELRTLGKKVFLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE +L  ++P  +   + +      
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-DVPEDESEAEHDKNT--- 175

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
              +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + +KY LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRKYTLIDTAG 233

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++ 
Sbjct: 234 VRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYAIEAGRAMVIA 293

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  YDSS + +
Sbjct: 294 INKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYDSSHLKV 353

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           S ++IT+ L  A + H P   +  R K+RYAH GG+NPP IVIHGN++     DY+RYLE
Sbjct: 354 SPAKITQILQDATEAHQPPTVQGRRIKMRYAHIGGQNPPTIVIHGNKVDKTPADYRRYLE 413

Query: 420 KYFYRTFSL 428
             F + + L
Sbjct: 414 NVFRKVYKL 422


>gi|28868645|ref|NP_791264.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213971514|ref|ZP_03399625.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1]
 gi|301386119|ref|ZP_07234537.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato Max13]
 gi|302060181|ref|ZP_07251722.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato K40]
 gi|302135124|ref|ZP_07261114.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|422587119|ref|ZP_16661790.1| GTP-binding protein Der [Pseudomonas syringae pv. morsprunorum str.
           M302280]
 gi|422652859|ref|ZP_16715636.1| GTP-binding protein Der [Pseudomonas syringae pv. actinidiae str.
           M302091]
 gi|422660778|ref|ZP_16723183.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str.
           M302278]
 gi|37999588|sp|Q886Y6.1|DER_PSESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|28851883|gb|AAO54959.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213923706|gb|EEB57290.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1]
 gi|330872875|gb|EGH07024.1| GTP-binding protein Der [Pseudomonas syringae pv. morsprunorum str.
           M302280]
 gi|330965919|gb|EGH66179.1| GTP-binding protein Der [Pseudomonas syringae pv. actinidiae str.
           M302091]
 gi|331019376|gb|EGH99432.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str.
           M302278]
          Length = 489

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 282/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P  +            
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEVEEVA 178

Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
              + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +
Sbjct: 299 GFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLYQ 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 VEKVPKSYVRYLENTYRRVLKLV 441


>gi|350421258|ref|XP_003492787.1| PREDICTED: hypothetical protein LOC100748976 [Bombus impatiens]
          Length = 1520

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/423 (45%), Positives = 282/423 (66%), Gaps = 21/423 (4%)

Query: 4    VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
            V  LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +I    +I+IDTGG +  
Sbjct: 1020 VAALVGRPNVGKSTLFNRLTKTRDALVADFPGLTRDRKYGKAHIQGHEYIVIDTGGIDGS 1079

Query: 64   VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
             ++G+ + M +Q+  AI E+DI++F+VD R GL+  D  I   LR   +P  LV NK++ 
Sbjct: 1080 -EEGVENHMAEQSLLAIEEADIVLFMVDARAGLLPADYAIAQHLRSRQKPTFLVANKTDG 1138

Query: 124  INS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
            +++ S++ +FYELG+G  + I+A +G G+   ++++LT      +   ++    ++   Y
Sbjct: 1139 LDADSVTGEFYELGLGEVYPIAASHGRGVTALIDHVLTPIFGLDRVDDEQITDTLYDGVY 1198

Query: 183  -------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKS 223
                               IKVAIVG+PNVGKSTL N +LGE+RV+ YD PGTTRDSI  
Sbjct: 1199 VQPSDEALAEEQQALADLPIKVAIVGRPNVGKSTLTNRILGEDRVVVYDMPGTTRDSIYI 1258

Query: 224  LFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDI 283
              E + ++Y+LIDTAG+R+R K  E +EKFSVIKTL++I +ANVV+L++DA++ +S QD+
Sbjct: 1259 PMERDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDAREGLSDQDL 1318

Query: 284  NIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINS 343
            ++  FI  SGRSL+V VNKWD +    ++ +K+ + ++L+F+ FA  +FISA+  + + +
Sbjct: 1319 SLLGFIINSGRSLVVVVNKWDGLSLEVKENVKSVLDERLDFVDFARIHFISALHGSGVGN 1378

Query: 344  FMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIH 403
              ESI   YD +   +STS +T+ +  A  +H P   +  R KL+YAH GG NPPI+VIH
Sbjct: 1379 LFESIIEAYDCATKRVSTSLLTKIMHMAQDDHQPPLVRGRRVKLKYAHAGGYNPPIVVIH 1438

Query: 404  GNR 406
            GN+
Sbjct: 1439 GNQ 1441



 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 173/360 (48%), Positives = 239/360 (66%), Gaps = 15/360 (4%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F+D  N ++L+LRPE TA  +R+ IE+ L+Y+  +RLWY GP FR+E
Sbjct: 62   GEVTDIVEKEMYTFLDR-NEESLTLRPELTAGCVRAGIEHGLLYNQEQRLWYLGPAFRYE 120

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
            RPQ GRYRQF+Q GVE  G  GPDIDAELI+M +R W+ L + +++ LELNSIG+   R 
Sbjct: 121  RPQKGRYRQFHQFGVEVFGLEGPDIDAELILMTARFWRALGVEQHVTLELNSIGSLQARA 180

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
             Y   L+ ++++HK      ED    +Y N LRVLDSKN  ++E+L NAP+L DYL+ +S
Sbjct: 181  NYRQALVAFLEQHK--ALLDEDCLRRMYTNPLRVLDSKNPQVQELLNNAPQLFDYLDDES 238

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
              HF G+ K+L++  ISY+IN +LVRG+DYYNRTVFEW T  LG+Q ++CGGGRYD L+ 
Sbjct: 239  KTHFDGLCKLLDFAGISYRINQRLVRGLDYYNRTVFEWVTTSLGAQGTVCGGGRYDGLVA 298

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFV-----LS 1161
            +   +  PA GFA+G+ERL+ L++ +N     S+Q DIY++  G+     + V     L+
Sbjct: 299  QLGGQPTPAVGFAMGVERLVLLVQTVNPEFTCSNQIDIYMIASGQLTNGTSVVAVTQRLA 358

Query: 1162 ENLR--TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            + LR     L+V+ N    N    FK Q  RA+   A  A ++GENE   N  IIK+LR 
Sbjct: 359  DTLREQVPTLRVMTNYGGGN----FKKQFSRADKWGAKLAIVVGENEAQANRAIIKNLRT 414


>gi|402698614|ref|ZP_10846593.1| GTP-binding protein Der [Pseudomonas fragi A22]
          Length = 489

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPELARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDPEEEEEGEAEVVL 178

Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
              + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R+ +K  + ++L F+ FA  +FISA+    + +  +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSEREFVKVELTRRLFFVDFADIHFISALHGTGVGNLYQ 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 VEKVPKSYVRYLENTYRRVLKLV 441


>gi|289626149|ref|ZP_06459103.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str.
           NCPPB 3681]
 gi|289649055|ref|ZP_06480398.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|422584765|ref|ZP_16659866.1| GTP-binding protein Der [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|298159504|gb|EFI00551.1| GTP-binding protein EngA [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330869573|gb|EGH04282.1| GTP-binding protein Der [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 490

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P               
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEEVEEV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|104780244|ref|YP_606742.1| GTP-binding protein EngA [Pseudomonas entomophila L48]
 gi|166225841|sp|Q1IEH7.1|DER_PSEE4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|95109231|emb|CAK13928.1| GTP-binding protein EngA [Pseudomonas entomophila L48]
          Length = 488

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/441 (43%), Positives = 281/441 (63%), Gaps = 14/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YG+     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D ++F+VD R G+   D++I   LRK  +  +LV NK
Sbjct: 61  TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKEAILVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY--------KKFFKK 171
            +NI++ ++  +F  LG+GN   ++   G GI   +E +L   +P         +   + 
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINALMEAVLG-HIPRDPVEDALDEDVAEG 178

Query: 172 KEFTNIHSI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
           +E T I      + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI   FE +
Sbjct: 179 EEATRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERD 238

Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
            +KY  IDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  F
Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298

Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
             ++GR++++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    +    +S+
Sbjct: 299 ALDAGRAVVIALNKWDGMEPGERDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKSV 358

Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
              + S++    TSR+T+ L  AI  H P      R KLRYAH GG NPP+IVIHGN+  
Sbjct: 359 QAAFMSAVTRWPTSRLTQILEDAISVHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTD 418

Query: 409 YIGNDYKRYLEKYFYRTFSLI 429
            I N Y RYLE  + R   L+
Sbjct: 419 KIPNSYSRYLENTYRRVLKLV 439


>gi|71735846|ref|YP_273582.1| GTP-binding protein EngA [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257487194|ref|ZP_05641235.1| GTP-binding protein EngA [Pseudomonas syringae pv. tabaci str. ATCC
           11528]
 gi|416018168|ref|ZP_11565162.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|416025552|ref|ZP_11569286.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|422594711|ref|ZP_16669001.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|422679842|ref|ZP_16738115.1| GTP-binding protein Der [Pseudomonas syringae pv. tabaci str. ATCC
           11528]
 gi|123637657|sp|Q48LZ0.1|DER_PSE14 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|71556399|gb|AAZ35610.1| GTP-binding protein engA [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320322917|gb|EFW79007.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329960|gb|EFW85948.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330985018|gb|EGH83121.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009189|gb|EGH89245.1| GTP-binding protein Der [Pseudomonas syringae pv. tabaci str. ATCC
           11528]
          Length = 490

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P               
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEEVEEV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|302185741|ref|ZP_07262414.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae 642]
 gi|422638388|ref|ZP_16701819.1| GTP-binding protein Der [Pseudomonas syringae Cit 7]
 gi|440744290|ref|ZP_20923594.1| GTP-binding protein Der [Pseudomonas syringae BRIP39023]
 gi|330950783|gb|EGH51043.1| GTP-binding protein Der [Pseudomonas syringae Cit 7]
 gi|440374304|gb|ELQ11040.1| GTP-binding protein Der [Pseudomonas syringae BRIP39023]
          Length = 490

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P               
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDEPEEGVEVEEV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|293610300|ref|ZP_06692601.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|427423137|ref|ZP_18913303.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-136]
 gi|292827532|gb|EFF85896.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|425700237|gb|EKU69828.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-136]
          Length = 469

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L  E+P      + E    H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAATHGRGVQQMLEDVLA-EVP------EDENPEEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGDLYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|398858736|ref|ZP_10614423.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM79]
 gi|398238463|gb|EJN24190.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM79]
          Length = 489

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDEEPEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|398841612|ref|ZP_10598823.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM102]
 gi|398107925|gb|EJL97915.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM102]
          Length = 489

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDEEQEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|66044500|ref|YP_234341.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae B728a]
 gi|81308464|sp|Q4ZX19.1|DER_PSEU2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|63255207|gb|AAY36303.1| Small GTP-binding protein protein domain:GTP-binding protein
           [Pseudomonas syringae pv. syringae B728a]
          Length = 490

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P               
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDEPEEGVEVEEV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|352082093|ref|ZP_08952916.1| ribosome-associated GTPase EngA [Rhodanobacter sp. 2APBS1]
 gi|389796718|ref|ZP_10199769.1| GTP-binding protein Der [Rhodanobacter sp. 116-2]
 gi|351682231|gb|EHA65337.1| ribosome-associated GTPase EngA [Rhodanobacter sp. 2APBS1]
 gi|388448243|gb|EIM04228.1| GTP-binding protein Der [Rhodanobacter sp. 116-2]
          Length = 467

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/433 (43%), Positives = 277/433 (63%), Gaps = 14/433 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG    G++ F+++DTGG 
Sbjct: 1   MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRTGERPFVVVDTGGL 60

Query: 61  EPEVKKGIMHEM----TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVL 116
                 GI   M     +Q + AI E+D+++F+VD R GL+ QD  I   LR+SG+PIV 
Sbjct: 61  S-----GIDEAMDVLTARQVRLAIAEADVLVFVVDARDGLLPQDDAILAELRRSGKPIVA 115

Query: 117 VINKSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
            +NK++ ++  ++  +F+  GIG    +SA +  G  +FL  +L + LP  +    +   
Sbjct: 116 AVNKTDGLDEQAVMAEFFAFGIGATLPLSAAHNRGTDDFLRVLLPL-LPADREAAAEAEG 174

Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
              SI   +VAIVG+PN GKSTLIN LLGE R+I  D  GTTRD I+   E + K+Y LI
Sbjct: 175 EDGSI---RVAIVGRPNAGKSTLINRLLGEERLIVSDVAGTTRDPIRVPLERDGKRYTLI 231

Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
           DTAGIRR+ +  E +EKFSVIKTL+SI  A VV++++DA++N++ QD+ +  +  + GR+
Sbjct: 232 DTAGIRRKARVEEAVEKFSVIKTLQSIAAAQVVVVMIDARENLADQDLTLIGYAIDEGRA 291

Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
           L++ +NKWD +   QR   +  + ++L F+ +A    ISA+  + +   M ++   + S+
Sbjct: 292 LVIAINKWDDMDSYQRDECRRALDRRLVFVDWAKQVQISALHGSGLRELMRAVVRAHASA 351

Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
              L +S +T+AL  A +++ P       PKLR+AH GG NPP IVIHG+R K+I   Y+
Sbjct: 352 TKELVSSDLTKALEKAYESYQPPLVNGHAPKLRFAHPGGTNPPTIVIHGSRTKHIAPAYQ 411

Query: 416 RYLEKYFYRTFSL 428
           RYLE +F + + L
Sbjct: 412 RYLENFFRKRYKL 424


>gi|300113469|ref|YP_003760044.1| histidyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539406|gb|ADJ27723.1| histidyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 423

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/365 (48%), Positives = 249/365 (68%), Gaps = 6/365 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+FID  NGD+L+LRPEGTA  +RS++++ L+  G  RLWY GPMFRHE
Sbjct: 56   GEVTDIVEKEMYTFIDR-NGDSLTLRPEGTAGCVRSILQHGLLTQGSLRLWYYGPMFRHE 114

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQFYQIGVE +G  GPD+DAELI+M +R W+ L L+++ L++NS+G+   R  
Sbjct: 115  RPQKGRYRQFYQIGVEVLGTEGPDVDAELILMTARFWRQLGLQDLHLQINSLGSPAARIA 174

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            Y   L+++   H+D     ED +  L+ N LR+LDSKN  + EI+  AP+LLDYL+ DS 
Sbjct: 175  YRERLVDFFTAHEDV--LDEDSRRRLHSNPLRILDSKNPALHEIIARAPRLLDYLDDDSC 232

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q  L+   I+YKIN +LVRG+DYY RTVFEW +D+LGSQ ++C GGRYD L+++
Sbjct: 233  AHFEALQHTLDSAGIAYKINPRLVRGLDYYTRTVFEWVSDQLGSQGTVCAGGRYDGLVEQ 292

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               + +PA GFA+G+ERL+ L+ +           D+Y+V VG +AE ++ + +E LR  
Sbjct: 293  LGGQSIPAVGFALGLERLVALLGEQG-RLQAPLPADLYLVAVGSQAEQESLLFAEQLREA 351

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
                 L    N+   SFKSQ+KRA+ S A +A I+GE+EI+  T+ +KDLR +     + 
Sbjct: 352  IPAARLQV--NHGGGSFKSQLKRADRSGARWALILGEDEILQGTVSVKDLRQRKPQELVP 409

Query: 1228 QISIS 1232
            Q  +S
Sbjct: 410  QDKLS 414


>gi|395500499|ref|ZP_10432078.1| GTP-binding protein Der [Pseudomonas sp. PAMC 25886]
 gi|395799013|ref|ZP_10478295.1| GTP-binding protein Der [Pseudomonas sp. Ag1]
 gi|421138866|ref|ZP_15598918.1| GTP-binding protein EngA [Pseudomonas fluorescens BBc6R8]
 gi|395336700|gb|EJF68559.1| GTP-binding protein Der [Pseudomonas sp. Ag1]
 gi|404510009|gb|EKA23927.1| GTP-binding protein EngA [Pseudomonas fluorescens BBc6R8]
          Length = 489

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/443 (43%), Positives = 282/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+II+DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  +G+G+   I+  +G GI   LE I   + P               
Sbjct: 120 IDNIDPEMARAEFSPMGLGDAIPIAGAHGRGITQMLE-IALRDFPRDDVDEVEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDYVKVELQRRLFFVEFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           L+ +   Y RYLE  + R   L+
Sbjct: 419 LEKVPKSYVRYLENTYRRVLKLV 441


>gi|224826450|ref|ZP_03699552.1| histidyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
 gi|347540918|ref|YP_004848343.1| histidyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
 gi|224601551|gb|EEG07732.1| histidyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
 gi|345644096|dbj|BAK77929.1| histidyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
          Length = 423

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/366 (49%), Positives = 251/366 (68%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNGD+L+LRPEGTA  +R+V+E+NL+Y+  +RLWY GPMFRHE
Sbjct: 57   GEVTDIVEKEMYSFTDSLNGDSLTLRPEGTAGTLRAVVEHNLLYNATQRLWYMGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKN-ICLELNSIGNFNERK 986
            RPQ GRYRQF+QIG+EA+GF GPDIDAE+I+M + LWK L L + + L+LN++GN +ER 
Sbjct: 117  RPQKGRYRQFHQIGIEALGFAGPDIDAEIILMTADLWKRLGLADSVELQLNTLGNKDERA 176

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
             +   LI Y+++H D     ED K  LY N LRVLD+KN  ++EI   AP+L DYL  +S
Sbjct: 177  AHREALIAYLERHHDM--LDEDGKRRLYSNPLRVLDTKNPALQEICNAAPRLTDYLGDES 234

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
              H+ G + +++   I Y  N +LVRG+DYYN++VFEW T +LG+Q ++C GGRYD L++
Sbjct: 235  RAHYEGWKAMIDGLGIRYVENPRLVRGLDYYNQSVFEWVTTELGAQGTVCAGGRYDGLVE 294

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  P  GF +G+ER++ L+++ N     S   D+Y+V  G  A L A  L+ +LR 
Sbjct: 295  QLGGKPAPGIGFGMGLERVMLLLQEKN-RLPASRGVDVYLVQQGAGAPLYAMQLAASLRA 353

Query: 1167 LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTL 1226
             GL VI +C       SFKSQMK+A+   A FA I+GENE+ N T ++K LR +    T+
Sbjct: 354  AGLSVIQHCG----EGSFKSQMKKADGCGAQFAVIVGENEVANATAVVKPLRLEAAQETV 409

Query: 1227 KQISIS 1232
               +++
Sbjct: 410  ALAAVA 415


>gi|359798967|ref|ZP_09301536.1| histidyl-tRNA synthetase [Achromobacter arsenitoxydans SY8]
 gi|359363105|gb|EHK64833.1| histidyl-tRNA synthetase [Achromobacter arsenitoxydans SY8]
          Length = 431

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/351 (50%), Positives = 251/351 (71%), Gaps = 7/351 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG++L++RPE TA ++R+ IE+NL+YD P+R++  GP+FRHE
Sbjct: 63   GEVTDIVEKEMYTFTDALNGESLTMRPEMTAGIVRASIEHNLLYDRPQRVYSIGPVFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAELI+M +RLWK L L ++ LELNS+G   ER  
Sbjct: 123  RPQRGRYRQFHQIDVEALGFAGPDVDAELIVMLARLWKLLGLTDVRLELNSLGQPAERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI +++KH+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L ++S 
Sbjct: 183  HRAALIEHLEKHRDI--LDEDGQRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ K L    I Y++N +LVRG+DYYN TVFEW TD+LGSQ ++CGGGRYD L++ 
Sbjct: 241  THFEGVCKRLTDAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGSQGTVCGGGRYDGLVEL 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++Y+VH G++A+  A  + E+LR  
Sbjct: 301  LGGKPAPAVGFAIGMERLLDLWEQ-SVEVEAPAECEVYVVHQGEDAQRLAARVGEDLRDA 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR 1218
            GL VI++        SFK+Q KRA+AS A  A I+G +E+ + T  +K LR
Sbjct: 360  GLSVIVHAG----PASFKAQFKRADASGARVAVILGADEVASQTASVKFLR 406


>gi|398907347|ref|ZP_10653796.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM50]
 gi|398171713|gb|EJM59610.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM50]
          Length = 489

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDEEPEDGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|422608871|ref|ZP_16680830.1| GTP-binding protein Der [Pseudomonas syringae pv. mori str. 301020]
 gi|330894498|gb|EGH27159.1| GTP-binding protein Der [Pseudomonas syringae pv. mori str. 301020]
          Length = 490

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIKEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P               
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEEVEEV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|375137037|ref|YP_004997687.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2]
 gi|325124482|gb|ADY84005.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 469

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G GI+  LE++L  E+P      + E    H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGIQQMLEDVLA-EVP------EDENPEEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGDLYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|443645098|ref|ZP_21128948.1| Ribosome-associated GTPase EngA (YfgK/Der) [Pseudomonas syringae
           pv. syringae B64]
 gi|443285115|gb|ELS44120.1| Ribosome-associated GTPase EngA (YfgK/Der) [Pseudomonas syringae
           pv. syringae B64]
          Length = 490

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/444 (42%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
            +NI+ +++  +F  +G+G+   ++  +G GI   L +I   E P  +            
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQML-DIALREFPRDEDELEEGAEVEEV 178

Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
               + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|399003833|ref|ZP_10706482.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM18]
 gi|398121577|gb|EJM11200.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM18]
          Length = 489

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDEEEPEEGEEEVVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|239500761|ref|ZP_04660071.1| GTP-binding protein EngA [Acinetobacter baumannii AB900]
 gi|417555569|ref|ZP_12206638.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-81]
 gi|417562822|ref|ZP_12213701.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC137]
 gi|421201271|ref|ZP_15658430.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC109]
 gi|421454304|ref|ZP_15903653.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-123]
 gi|421634179|ref|ZP_16074798.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-13]
 gi|421677542|ref|ZP_16117434.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC111]
 gi|421805779|ref|ZP_16241655.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-A-694]
 gi|395525404|gb|EJG13493.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC137]
 gi|395563303|gb|EJG24956.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC109]
 gi|400213071|gb|EJO44028.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-123]
 gi|400391986|gb|EJP59033.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-81]
 gi|408704897|gb|EKL50253.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-13]
 gi|410393298|gb|EKP45652.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC111]
 gi|410408041|gb|EKP60016.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-A-694]
          Length = 469

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L  ++P      + E    H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDESPEEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A   H P   +  R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|71908597|ref|YP_286184.1| histidyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|83305866|sp|Q47BR7.1|SYH_DECAR RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|71848218|gb|AAZ47714.1| histidyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 429

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/353 (50%), Positives = 243/353 (68%), Gaps = 7/353 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF+D LNG+ L+LRPEGTA  +R+VIE+NL     +RL+Y G MFRHE
Sbjct: 57   GEVTDIVEKEMYSFVDGLNGEALTLRPEGTAGCVRAVIEHNLAARQTQRLYYIGQMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVE+ G  GPDIDAE+I+M +RLW +L L  I L+LNS+G   ER  
Sbjct: 117  RPQKGRYRQFHQVGVESFGMAGPDIDAEMILMGARLWADLGLDGIELQLNSLGQPEERAL 176

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y +  ++++   ED K  L+ N LR+LD+KN  ++E+   APKL+DYL  +SL
Sbjct: 177  HRAALITYFE--ENAELLDEDAKRRLHTNPLRILDTKNPAMQELCAAAPKLIDYLGAESL 234

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+Q++L    + + IN +LVRG+DYYN TVFEW TDKLG+Q ++C GGRYD L+++
Sbjct: 235  AHFEGVQRVLRDAGVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVCAGGRYDGLVEQ 294

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFA+G+ERLI LI++       +   D+Y+VH G+ A  +AF ++E LR  
Sbjct: 295  LGGKPTPACGFAMGVERLIALIRESG-GEPAAPAPDVYLVHQGEAAARQAFRVAEGLRDQ 353

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 1220
            G+ V+ +C       SFKSQMK+A+ S A FA IIG++E       +K LR +
Sbjct: 354  GINVLQHCGGG----SFKSQMKKADGSGATFAVIIGDDEAATGEAQLKSLRAE 402


>gi|237654046|ref|YP_002890360.1| histidyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237625293|gb|ACR01983.1| histidyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 431

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/352 (51%), Positives = 245/352 (69%), Gaps = 8/352 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLI-YDGPKRLWYSGPMFRH 926
            GE TDIV+KEMYSF D LNG++L+LRPEGTAS +R+ I++NLI   GP+RL+Y GPMFRH
Sbjct: 57   GEVTDIVEKEMYSFEDALNGEHLTLRPEGTASCVRAAIQHNLIPAGGPQRLYYYGPMFRH 116

Query: 927  ERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERK 986
            ERPQ GRYRQF+QIGVEA+GF G D DAELI+MC+RLW++L L+++ LE+NS+G+  ER 
Sbjct: 117  ERPQKGRYRQFHQIGVEALGFAGADTDAELILMCARLWEDLGLEDVALEINSLGSPEERA 176

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
            ++   LI ++++H+D     ED K  LY N LR+LD+KN  ++ I+  AP+L DYL  +S
Sbjct: 177  QHRAALIAHLEQHQDK--LDEDGKRRLYTNPLRILDTKNPELQAIVEAAPRLADYLGDES 234

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
              HF  +Q  L    I Y+IN +LVRG+DYYNRTVFEW T +LG+Q +IC GGRYD L +
Sbjct: 235  KAHFEAVQVFLKDAGIPYRINHRLVRGLDYYNRTVFEWVTTRLGAQGTICAGGRYDGLFE 294

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  PA+GFAIGIERL+ L +            D+Y+V VG+ A+   F  +E LR 
Sbjct: 295  QLGGKPQPAAGFAIGIERLLLLWQACG-GEAERPVPDVYVVSVGEAAQRLGFRAAETLRE 353

Query: 1167 LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR 1218
             G  V+++C       SFKSQMK+A+AS A  A +IGE+E     + +K LR
Sbjct: 354  HGFAVLMHCGGG----SFKSQMKKADASEAPVAIVIGEDEAAAGEVGLKPLR 401


>gi|395649903|ref|ZP_10437753.1| GTP-binding protein Der [Pseudomonas extremaustralis 14-3 substr.
           14-3b]
          Length = 489

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/443 (43%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+II+DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  +G+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 IDNIDPEMARAEFSPMGLGDAIPIAGAHGRGITQMLEIALS-DFPKDDAEEEEGEEEVVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|422297384|ref|ZP_16385022.1| GTP-binding protein EngA [Pseudomonas avellanae BPIC 631]
 gi|407991213|gb|EKG33117.1| GTP-binding protein EngA [Pseudomonas avellanae BPIC 631]
          Length = 489

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/443 (42%), Positives = 282/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P  +            
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEVEEVA 178

Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
              + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            +  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  +
Sbjct: 299 GYALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLYQ 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 VEKVPKSYVRYLENTYRRVLKLV 441


>gi|398879590|ref|ZP_10634682.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM67]
 gi|398882218|ref|ZP_10637188.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM60]
 gi|398196298|gb|EJM83311.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM67]
 gi|398199467|gb|EJM86409.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM60]
          Length = 489

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDEEELEEGEEEDVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  ESGR+L++ +NKWD +  ++R  +K  ++++L F+ +A  +FISA+    + +   
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|381151858|ref|ZP_09863727.1| ribosome-associated GTPase EngA [Methylomicrobium album BG8]
 gi|380883830|gb|EIC29707.1| ribosome-associated GTPase EngA [Methylomicrobium album BG8]
          Length = 464

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/429 (43%), Positives = 278/429 (64%), Gaps = 9/429 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFN LT +R+ALVA+YPGLTRDR YG    G  + +++DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNYLTRTREALVADYPGLTRDRQYGRVRYGDMACLVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + GI     KQ + A+ E+D++ F+VD R+GL   D++I   LRK G+PIVLV+NK
Sbjct: 61  ADDAE-GIDSFSGKQVRIALEEADVVFFLVDAREGLSASDEVIAKDLRKLGKPIVLVVNK 119

Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + I++ +++ DF+ L +G P  I+A +G G+ + L          +      +      
Sbjct: 120 IDGIDAHTVAADFHALALGEPVYIAAAHGRGVADLLAG-------SRHLLPSVQEEPEAG 172

Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
            + I +A+VG+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE   K++ LIDTAG
Sbjct: 173 PKGISIAVVGRPNVGKSTLVNRLLGEERVVVFDEPGTTRDSIYIPFERGGKRFTLIDTAG 232

Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
           +RRR +  E IEKFSVIK+L++I ++NVVI L+DA + ++ QD ++   + E+G++LI+ 
Sbjct: 233 MRRRARIAETIEKFSVIKSLQAIEKSNVVIYLIDASEGVTDQDAHLLGLVLETGKALIIG 292

Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
           +NKWD +   Q+++++  +  KL+F+ FA  + ISA+  + +    + ++ +Y ++++ L
Sbjct: 293 LNKWDGLSVEQKEMVRRQLDLKLSFVDFAEKHPISALHGSGVGKLFDVVHSLYQAAMVDL 352

Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
           ST  +TR L  A   H P      R KL+YAHQGG+NPP++VIHG +   + N YKR+L 
Sbjct: 353 STPLLTRLLKEATDAHQPPMVNNRRIKLKYAHQGGRNPPVVVIHGIQTDALPNAYKRFLM 412

Query: 420 KYFYRTFSL 428
            Y      L
Sbjct: 413 NYLRERLQL 421


>gi|398994135|ref|ZP_10697056.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM21]
 gi|398133156|gb|EJM22386.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM21]
          Length = 489

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 283/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDEEPEDGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  ESGR+L++ +NKWD +  ++R  +K  ++++L F+ +A  +FISA+    + +   
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|77164419|ref|YP_342944.1| histidyl-tRNA synthetase, class IIA [Nitrosococcus oceani ATCC 19707]
 gi|254433972|ref|ZP_05047480.1| histidyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|76882733|gb|ABA57414.1| histidyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090305|gb|EDZ67576.1| histidyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 423

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/365 (48%), Positives = 250/365 (68%), Gaps = 6/365 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+FID  NGD+L+LRPEGTA  +RS++++ L+  GP RLWY GPMFRHE
Sbjct: 56   GEVTDIVEKEMYTFIDR-NGDSLTLRPEGTAGCVRSILQHGLLTQGPLRLWYYGPMFRHE 114

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQFYQIGVE +G  GPD+DAELI+M +R W+ L L+++ L+LNS+G+   R  
Sbjct: 115  RPQKGRYRQFYQIGVEVLGTKGPDVDAELILMTARFWRRLGLQDLRLQLNSLGSPAARIA 174

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            Y   L+++   H+D     ED +  L+ N LR+LDSKN  ++EI+  AP+LLDYL+ DS 
Sbjct: 175  YRERLVDFFTAHEDV--LDEDSRRRLHSNPLRILDSKNPALQEIIEQAPQLLDYLDDDSR 232

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  ++  L+  +I+YKIN +LVRG+DYY RTVFEW +D+LGSQ ++C GGRYD L+++
Sbjct: 233  THFEALRHTLDSADIAYKINPRLVRGLDYYTRTVFEWVSDQLGSQGTVCAGGRYDGLVEQ 292

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               + +PA GFA+G++RL+ L+ +           D+Y+V VG +AE ++ + +E LR  
Sbjct: 293  LGGQSIPAVGFALGLDRLVALLGEQG-RLKAPIPADLYLVAVGPQAERESLLFAERLREA 351

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
                 L   +     SFKSQ+KRA+ S A +A I+GE+EI+  T+ +KDLR       + 
Sbjct: 352  IPAARLQVNYGG--GSFKSQLKRADRSGARWALILGEDEIVQGTVSVKDLRQGQPQELVS 409

Query: 1228 QISIS 1232
            Q  +S
Sbjct: 410  QDKLS 414


>gi|389685769|ref|ZP_10177092.1| ribosome-associated GTPase EngA [Pseudomonas chlororaphis O6]
 gi|399009197|ref|ZP_10711639.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM17]
 gi|425901317|ref|ZP_18877908.1| ribosome-associated GTPase EngA [Pseudomonas chlororaphis subsp.
           aureofaciens 30-84]
 gi|388550111|gb|EIM13381.1| ribosome-associated GTPase EngA [Pseudomonas chlororaphis O6]
 gi|397883572|gb|EJL00059.1| ribosome-associated GTPase EngA [Pseudomonas chlororaphis subsp.
           aureofaciens 30-84]
 gi|398113474|gb|EJM03321.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM17]
          Length = 490

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 281/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +++I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   ++ NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKTSYVIANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+  ++  +F  LG+G+   I+  +G GI   LE I   E P               
Sbjct: 120 VDNIDPDMARAEFAPLGMGDAIPIAGAHGRGITQMLE-IALREFPKDDADEPEEGEEEVV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMDPRERDYVKTELERRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|386829559|ref|ZP_10116666.1| 23S rRNA m2A2503 methyltransferase [Beggiatoa alba B18LD]
 gi|386430443|gb|EIJ44271.1| 23S rRNA m2A2503 methyltransferase [Beggiatoa alba B18LD]
          Length = 375

 Score =  374 bits (960), Expect = e-100,   Method: Composition-based stats.
 Identities = 175/344 (50%), Positives = 243/344 (70%), Gaps = 6/344 (1%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           +LGE PFRA QL +WIH+ GV++F++MT+ S +LR++L+    I  P +++ Q S DGTR
Sbjct: 22  QLGEKPFRATQLLQWIHQQGVTNFDEMTNFSKALRQRLQTVACITLPKVVTTQKSADGTR 81

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+  +   N IETVFIPE +R TLC+S+QVGCA++C FC+T +QGF RNLT+GEII QL
Sbjct: 82  KWLLQLADGNCIETVFIPEDDRGTLCVSSQVGCALDCRFCATAQQGFNRNLTLGEIIAQL 141

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+ E +LR E   +++    R I+N+VMMGMGEPL N+   + A+KL++ D AYGLS R 
Sbjct: 142 WLAEHELRAE-GYQLDESYARVISNVVMMGMGEPLANFNHVVKAMKLMMDDFAYGLSWRR 200

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           + LST+GI+P + +L +ECPV LAVSLHA+N+ LRN+LVPI++KYP+ EL+ AC  Y+  
Sbjct: 201 ITLSTAGIVPALLRLKEECPVNLAVSLHATNDELRNQLVPINQKYPIAELLAACRAYVEE 260

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
             R  +TFEY ML GINDT  HA  L+ L+         K+NLIPFN FP +    S  +
Sbjct: 261 DNRRRVTFEYVMLKGINDTPAHARALVKLLSH----VPSKVNLIPFNPFPQTGFERSDPA 316

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
           RI+ F  IL+ +G+    RK RG+DI+AACGQL+G+  D  +++
Sbjct: 317 RIETFRDILIQAGMITLTRKTRGDDIDAACGQLAGKVQDRSRRQ 360


>gi|163856331|ref|YP_001630629.1| histidyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163260059|emb|CAP42360.1| hisS [Bordetella petrii]
          Length = 431

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/361 (49%), Positives = 250/361 (69%), Gaps = 7/361 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA V+R+ IE+NL+YD P+R++  GP+FRHE
Sbjct: 63   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGVVRASIEHNLLYDRPQRVYSIGPVFRHE 122

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAELI+M +RLWK L L ++ LELNS+G   ER  
Sbjct: 123  RPQRGRYRQFHQIDVEALGFAGPDVDAELIVMLARLWKRLGLTDVRLELNSLGQPAERAA 182

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  LY N LRVLD+KN  ++ +  +AP+L D+L  +S 
Sbjct: 183  HRAALIEHLERHRDI--LDEDGQRRLYSNPLRVLDTKNPAMQAMADSAPRLFDFLGDESR 240

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ ++L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD LI+ 
Sbjct: 241  AHFDGLCQLLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLIEL 300

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++    + +C++Y+VH G+ A+  A  + E LR  
Sbjct: 301  LGGKPAPAVGFAIGMERLLDLWEQ-SVPPAPTPECEVYVVHQGEAAQRLAARVGEQLRDA 359

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL VI++   +     FKSQ KRA+AS A  A I+G +E+   T  +K LR        +
Sbjct: 360  GLSVIVHAGSSG----FKSQFKRADASGARVAVILGSDEVAAGTASVKFLRADAAGEAAQ 415

Query: 1228 Q 1228
            Q
Sbjct: 416  Q 416


>gi|422671326|ref|ZP_16730692.1| GTP-binding protein Der [Pseudomonas syringae pv. aceris str.
           M302273]
 gi|330969066|gb|EGH69132.1| GTP-binding protein Der [Pseudomonas syringae pv. aceris str.
           M302273]
          Length = 490

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 282/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P               
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGGHGRGISQMLE-IALREFPRDEDEPEEGVEVEEV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QVEKVPKSYVRYLENTYRRVLKLV 442


>gi|406037300|ref|ZP_11044664.1| GTP-binding protein Der [Acinetobacter parvus DSM 16617 = CIP
           108168]
          Length = 469

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 291/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+D+IIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDTY-MAEQSKTAIHEADMIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE +L  E+P      + E    H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPIQVAASHGRGVQQMLEEVLA-EVP------EDENPEEHN 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +ANVV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDANVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+SS + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESSNLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPSIGGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|410419765|ref|YP_006900214.1| histidyl-tRNA synthetase [Bordetella bronchiseptica MO149]
 gi|408447060|emb|CCJ58732.1| histidyl-tRNA synthetase [Bordetella bronchiseptica MO149]
          Length = 428

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 255/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN +++E+  +AP+L D+L ++S 
Sbjct: 180  HRAALIEHLERHQDV--LDEDGRRRMYSNPLRVLDTKNPVMQEMADSAPRLFDFLGEESR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 238  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 298  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 357  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 412

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 413  QQVPLA 418


>gi|169797239|ref|YP_001715032.1| GTP-binding protein EngA [Acinetobacter baumannii AYE]
 gi|184156836|ref|YP_001845175.1| GTP-binding protein EngA [Acinetobacter baumannii ACICU]
 gi|215484680|ref|YP_002326915.1| small GTP-binding domain protein [Acinetobacter baumannii
           AB307-0294]
 gi|260556121|ref|ZP_05828340.1| ribosome-associated GTPase EngA [Acinetobacter baumannii ATCC 19606
           = CIP 70.34]
 gi|301509976|ref|ZP_07235213.1| GTP-binding protein EngA [Acinetobacter baumannii AB058]
 gi|332851256|ref|ZP_08433329.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6013150]
 gi|332866125|ref|ZP_08436840.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6013113]
 gi|332873250|ref|ZP_08441207.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6014059]
 gi|384130507|ref|YP_005513119.1| engA [Acinetobacter baumannii 1656-2]
 gi|384141793|ref|YP_005524503.1| putative GTP-binding protein EngA [Acinetobacter baumannii
           MDR-ZJ06]
 gi|385236104|ref|YP_005797443.1| GTP-binding protein EngA [Acinetobacter baumannii TCDC-AB0715]
 gi|387125250|ref|YP_006291132.1| ribosome-associated GTPase EngA [Acinetobacter baumannii MDR-TJ]
 gi|403673367|ref|ZP_10935664.1| GTP-binding protein Der [Acinetobacter sp. NCTC 10304]
 gi|407931440|ref|YP_006847083.1| ribosome-associated GTPase EngA [Acinetobacter baumannii TYTH-1]
 gi|416146612|ref|ZP_11601275.1| GTP-binding protein EngA [Acinetobacter baumannii AB210]
 gi|417545870|ref|ZP_12196956.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC032]
 gi|417548471|ref|ZP_12199552.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-18]
 gi|417566609|ref|ZP_12217481.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC143]
 gi|417570291|ref|ZP_12221148.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC189]
 gi|417577482|ref|ZP_12228327.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-17]
 gi|417871149|ref|ZP_12516092.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH1]
 gi|417875812|ref|ZP_12520615.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH2]
 gi|417879690|ref|ZP_12524247.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH3]
 gi|417882146|ref|ZP_12526454.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH4]
 gi|421201852|ref|ZP_15659007.1| GTP-binding protein EngA [Acinetobacter baumannii AC12]
 gi|421535222|ref|ZP_15981484.1| GTP-binding protein EngA [Acinetobacter baumannii AC30]
 gi|421620710|ref|ZP_16061639.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC074]
 gi|421625679|ref|ZP_16066525.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC098]
 gi|421630804|ref|ZP_16071505.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC180]
 gi|421642861|ref|ZP_16083372.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-235]
 gi|421649194|ref|ZP_16089589.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-251]
 gi|421651028|ref|ZP_16091400.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC0162]
 gi|421655157|ref|ZP_16095481.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-72]
 gi|421659239|ref|ZP_16099460.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-83]
 gi|421662384|ref|ZP_16102552.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC110]
 gi|421666261|ref|ZP_16106353.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC087]
 gi|421670862|ref|ZP_16110844.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC099]
 gi|421675908|ref|ZP_16115827.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC065]
 gi|421688323|ref|ZP_16128023.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-143]
 gi|421692427|ref|ZP_16132078.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-116]
 gi|421694075|ref|ZP_16133707.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-692]
 gi|421698071|ref|ZP_16137615.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-58]
 gi|421702240|ref|ZP_16141725.1| GTP-binding protein Der [Acinetobacter baumannii ZWS1122]
 gi|421705979|ref|ZP_16145400.1| GTP-binding protein Der [Acinetobacter baumannii ZWS1219]
 gi|421789309|ref|ZP_16225571.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-82]
 gi|421792398|ref|ZP_16228553.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-2]
 gi|421798254|ref|ZP_16234279.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-21]
 gi|421807834|ref|ZP_16243691.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC035]
 gi|424053737|ref|ZP_17791268.1| GTPase Der [Acinetobacter baumannii Ab11111]
 gi|424061181|ref|ZP_17798671.1| GTPase Der [Acinetobacter baumannii Ab33333]
 gi|424064672|ref|ZP_17802156.1| GTPase Der [Acinetobacter baumannii Ab44444]
 gi|425749357|ref|ZP_18867337.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-348]
 gi|425751504|ref|ZP_18869449.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-113]
 gi|445400091|ref|ZP_21429741.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-57]
 gi|445446821|ref|ZP_21443452.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-A-92]
 gi|445458183|ref|ZP_21447007.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC047]
 gi|445465113|ref|ZP_21449891.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC338]
 gi|445481615|ref|ZP_21456059.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-78]
 gi|445486344|ref|ZP_21457402.1| ribosome-associated GTPase EngA [Acinetobacter baumannii AA-014]
 gi|254783127|sp|B7H065.1|DER_ACIB3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|254783129|sp|B2I3F0.1|DER_ACIBC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|254783131|sp|B0V4V6.1|DER_ACIBY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|254783285|sp|A3M215.2|DER_ACIBT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|169150166|emb|CAM88060.1| putative GTP-binding protein EngA [Acinetobacter baumannii AYE]
 gi|183208430|gb|ACC55828.1| predicted GTPase [Acinetobacter baumannii ACICU]
 gi|193076314|gb|ABO10959.2| putative GTP-binding protein EngA [Acinetobacter baumannii ATCC
           17978]
 gi|213986103|gb|ACJ56402.1| small GTP-binding domain protein [Acinetobacter baumannii
           AB307-0294]
 gi|260410176|gb|EEX03475.1| ribosome-associated GTPase EngA [Acinetobacter baumannii ATCC 19606
           = CIP 70.34]
 gi|322506727|gb|ADX02181.1| engA [Acinetobacter baumannii 1656-2]
 gi|323516601|gb|ADX90982.1| GTP-binding protein EngA [Acinetobacter baumannii TCDC-AB0715]
 gi|332730136|gb|EGJ61463.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6013150]
 gi|332734766|gb|EGJ65860.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6013113]
 gi|332738762|gb|EGJ69632.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6014059]
 gi|333365993|gb|EGK48007.1| GTP-binding protein EngA [Acinetobacter baumannii AB210]
 gi|342224793|gb|EGT89811.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH2]
 gi|342225970|gb|EGT90946.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH1]
 gi|342227788|gb|EGT92701.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH3]
 gi|342238395|gb|EGU02828.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH4]
 gi|347592286|gb|AEP05007.1| putative GTP-binding protein EngA [Acinetobacter baumannii
           MDR-ZJ06]
 gi|385879742|gb|AFI96837.1| ribosome-associated GTPase EngA [Acinetobacter baumannii MDR-TJ]
 gi|395550739|gb|EJG16748.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC189]
 gi|395552281|gb|EJG18289.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC143]
 gi|395570703|gb|EJG31365.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-17]
 gi|398328737|gb|EJN44860.1| GTP-binding protein EngA [Acinetobacter baumannii AC12]
 gi|400383758|gb|EJP42436.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC032]
 gi|400388770|gb|EJP51842.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-18]
 gi|404559713|gb|EKA64964.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-116]
 gi|404561066|gb|EKA66302.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-143]
 gi|404569914|gb|EKA74999.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-692]
 gi|404573117|gb|EKA78157.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-58]
 gi|404666863|gb|EKB34793.1| GTPase Der [Acinetobacter baumannii Ab33333]
 gi|404667223|gb|EKB35144.1| GTPase Der [Acinetobacter baumannii Ab11111]
 gi|404672755|gb|EKB40559.1| GTPase Der [Acinetobacter baumannii Ab44444]
 gi|407195003|gb|EKE66139.1| GTP-binding protein Der [Acinetobacter baumannii ZWS1122]
 gi|407195392|gb|EKE66526.1| GTP-binding protein Der [Acinetobacter baumannii ZWS1219]
 gi|407900021|gb|AFU36852.1| ribosome-associated GTPase EngA [Acinetobacter baumannii TYTH-1]
 gi|408509040|gb|EKK10716.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC0162]
 gi|408509294|gb|EKK10969.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-72]
 gi|408511427|gb|EKK13075.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-235]
 gi|408513967|gb|EKK15579.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-251]
 gi|408697190|gb|EKL42710.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC180]
 gi|408697773|gb|EKL43279.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC098]
 gi|408699987|gb|EKL45459.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC074]
 gi|408707950|gb|EKL53228.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-83]
 gi|408715187|gb|EKL60317.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC110]
 gi|409986775|gb|EKO42966.1| GTP-binding protein EngA [Acinetobacter baumannii AC30]
 gi|410381425|gb|EKP33991.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC065]
 gi|410383159|gb|EKP35692.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC099]
 gi|410388186|gb|EKP40625.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC087]
 gi|410394840|gb|EKP47164.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-21]
 gi|410399239|gb|EKP51436.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-82]
 gi|410400705|gb|EKP52873.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-2]
 gi|410416013|gb|EKP67788.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC035]
 gi|425489430|gb|EKU55742.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-348]
 gi|425499951|gb|EKU65979.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-113]
 gi|444759763|gb|ELW84225.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-A-92]
 gi|444769829|gb|ELW93997.1| ribosome-associated GTPase EngA [Acinetobacter baumannii AA-014]
 gi|444770407|gb|ELW94564.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-78]
 gi|444775827|gb|ELW99883.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC047]
 gi|444779245|gb|ELX03239.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC338]
 gi|444783473|gb|ELX07332.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-57]
 gi|452955788|gb|EME61185.1| GTP-binding protein Der [Acinetobacter baumannii MSP4-16]
          Length = 469

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L  ++P      + E    H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDENPEEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A   H P   +  R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|387895479|ref|YP_006325776.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens A506]
 gi|388467462|ref|ZP_10141672.1| ribosome-associated GTPase EngA [Pseudomonas synxantha BG33R]
 gi|387164469|gb|AFJ59668.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens A506]
 gi|388011042|gb|EIK72229.1| ribosome-associated GTPase EngA [Pseudomonas synxantha BG33R]
          Length = 489

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/443 (43%), Positives = 281/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+II+DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   LV NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+   +  +F  +G+G+   ++  +G GI   LE I   + P               
Sbjct: 120 IDNIDPEAARAEFSPMGLGDAIPVAGAHGRGITQMLE-IALRDFPKDDVEEEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|402756868|ref|ZP_10859124.1| GTP-binding protein Der [Acinetobacter sp. NCTC 7422]
          Length = 469

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/430 (43%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DII+F+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLGKKVHLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE +L  E+P      + E  + H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-EVP------EDENPDEHN 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   +E + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRQYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F R + L
Sbjct: 413 ENVFRRVYKL 422


>gi|262371654|ref|ZP_06064933.1| ribosome-associated GTPase EngA [Acinetobacter junii SH205]
 gi|262311679|gb|EEY92764.1| ribosome-associated GTPase EngA [Acinetobacter junii SH205]
          Length = 469

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 291/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAIHEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE +L  E+P      + E    H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-EVP------EDENPEEHN 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+SS + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESSNLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPSIGGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|393757565|ref|ZP_10346389.1| histidyl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
 gi|393165257|gb|EJC65306.1| histidyl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
          Length = 427

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/377 (48%), Positives = 254/377 (67%), Gaps = 9/377 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNGD L++RPE TA ++R+ IE+NL+YD P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYSFTDSLNGDKLTMRPEFTAGMVRASIEHNLLYDRPHRVYAMGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+G PGPD+DAELI+M +RLWK L L +I LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGLPGPDVDAELIVMLARLWKKLGLTDIRLELNSLGQAEERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI +++ HKD     E+ +  +Y N LRVLD+KN  ++++   AP+L D+L ++S 
Sbjct: 180  HRAALIEHLEAHKDV--LDEEAQRRMYTNPLRVLDTKNPAMQDMANAAPRLFDFLGEESR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+   L+   I Y +N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD LI+ 
Sbjct: 238  AHFKGVCDRLDDAGIGYTLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLIEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L  +       + +C +Y+VH G+ A+ KA +L+E LR  
Sbjct: 298  MGGKPAPAVGFAIGMERLLDLCSQEG-EQEQAPECQVYMVHQGEAAQRKASLLAEQLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            GL+VI++   +     FKSQ KRA+AS A  A I+GE+E+      +K LR    D   +
Sbjct: 357  GLQVIVHAGSSG----FKSQFKRADASGAQAAVILGEDELQKEQASVKWLRAA--DGAQQ 410

Query: 1228 QISISFKDAENYFYKKI 1244
            Q S+ F +  +    +I
Sbjct: 411  QQSVDFSELASVLSARI 427


>gi|160900450|ref|YP_001566032.1| histidyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366034|gb|ABX37647.1| histidyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 431

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/358 (49%), Positives = 247/358 (68%), Gaps = 15/358 (4%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D+LNG+ L+LRPEGTAS++R+ IENNL+YDG KR+WY GPMFRHE
Sbjct: 59   GEVTDIVEKEMYSFEDKLNGERLTLRPEGTASLVRATIENNLLYDGGKRMWYMGPMFRHE 118

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIG EA+GF GPD+DAELI++   LWK L L    LE+NS+G   ER+ 
Sbjct: 119  RPQRGRYRQFHQIGAEALGFAGPDVDAELIMLAVSLWKQLGLTQWRLEINSLGQPEERQA 178

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y+++H+D     E+ K  +Y N LRVLD+KN  ++E++  AP+LLD+L + SL
Sbjct: 179  HRQALIAYLEQHQDV--MDEEAKRRMYSNPLRVLDTKNPAMQEMVNGAPRLLDFLGEGSL 236

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G++ IL+ N + + +N +LVRG+DYYN TVFE+ TD LGSQ +IC GGRYD+LI++
Sbjct: 237  AHFDGLKAILDANGVPWTVNPRLVRGLDYYNLTVFEFITDMLGSQGTICAGGRYDYLIEQ 296

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININ------HNFSHQCDIYIVHVGKEAELKAFVLS 1161
               K  PA G+A+G+ER++EL+K++  +      H ++   D+  + V       A    
Sbjct: 297  VGGKSAPAVGWALGVERVLELVKELGTDIPAPTLHAYAIVPDVAAMPV-------ALRTL 349

Query: 1162 ENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            + LR  G++V ++        S KSQ K+A+AS A+FA I G +E+    + +K LR+
Sbjct: 350  QQLREAGVRVQMHAASAEGMGSMKSQFKKADASGAHFALIFGSDELQQGLVTVKSLRD 407


>gi|229592437|ref|YP_002874556.1| GTP-binding protein EngA [Pseudomonas fluorescens SBW25]
 gi|229364303|emb|CAY52040.1| GTP-binding protein [Pseudomonas fluorescens SBW25]
          Length = 493

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/442 (43%), Positives = 281/442 (63%), Gaps = 14/442 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+II+DTGG 
Sbjct: 5   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 64

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   LV NK
Sbjct: 65  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLVANK 123

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
            +NI+   +  +F  +G+G+   ++  +G GI   LE  L+             E    +
Sbjct: 124 IDNIDPEQARAEFSPMGLGDAIPVAGAHGRGITQMLEIALSTFPKDDDEEEEGEEEIVAE 183

Query: 168 FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
             + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE 
Sbjct: 184 GEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFER 243

Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
           N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+  
Sbjct: 244 NDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLG 303

Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMES 347
           F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   S
Sbjct: 304 FALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYAS 363

Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRL 407
           + + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN++
Sbjct: 364 VQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQI 423

Query: 408 KYIGNDYKRYLEKYFYRTFSLI 429
           + +   Y RYLE  + R   L+
Sbjct: 424 EKVPKSYVRYLENTYRRVLKLV 445


>gi|187478833|ref|YP_786857.1| histidyl-tRNA synthetase [Bordetella avium 197N]
 gi|123752254|sp|Q2KY92.1|SYH_BORA1 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|115423419|emb|CAJ49953.1| histidyl-tRNA synthetase [Bordetella avium 197N]
          Length = 428

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/351 (51%), Positives = 243/351 (69%), Gaps = 7/351 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNG++L++RPE TA V+R+ IE+N++Y+ P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYTFTDALNGESLTMRPEMTAGVVRAAIEHNMLYERPHRVYSIGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPDIDAELI+M  RLW  L L +I LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGFAGPDIDAELIVMLGRLWNTLGLADIRLELNSLGQPAERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y++KH D     ED K  LY N LRVLD+KN  ++E+   AP+L D+L + S 
Sbjct: 180  HRAALIEYLEKHVDI--LDEDGKRRLYTNPLRVLDTKNPALQEMANAAPRLFDFLGEASR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L+   I Y +N +LVRG+DYYN TVFEW TD+LGSQ ++CGGGRYD LI+ 
Sbjct: 238  AHFDGVCQRLDDAGIGYSLNPRLVRGLDYYNLTVFEWVTDRLGSQGTVCGGGRYDGLIEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ +       +C++Y+VH G+ A+  A  + E+LR  
Sbjct: 298  LGGKPAPAVGFAIGVERLLDLWEQ-SAGQQTPPECEVYVVHQGEGAQRLAARVGEDLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLR 1218
            GL VI++        SFKSQ KRA+AS A  A I+G++E+   T  +K LR
Sbjct: 357  GLSVIVHAG----AASFKSQFKRADASGARVAVILGDDEVATKTASVKYLR 403


>gi|407363602|ref|ZP_11110134.1| GTP-binding protein Der [Pseudomonas mandelii JR-1]
          Length = 489

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 282/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDDEQEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  ESGR+L++ +NKWD +  ++R  +K  ++++L F+ +A  +FISA+    + +   
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T  L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTTILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|169634401|ref|YP_001708137.1| GTP-binding protein EngA [Acinetobacter baumannii SDF]
 gi|254783130|sp|B0VKR4.1|DER_ACIBS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
 gi|169153193|emb|CAP02283.1| putative GTP-binding protein EngA [Acinetobacter baumannii]
          Length = 469

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L  ++P      + E    H 
Sbjct: 120 VDGVHAEAALVEFYKLGLGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDENPEEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A   H P   +  R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|398937809|ref|ZP_10667475.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM41(2012)]
 gi|398166577|gb|EJM54671.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM41(2012)]
          Length = 489

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 282/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  LG+G+   I+  +G GI   LE  L+ + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDDELEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  ESGR+L++ +NKWD +  ++R  +K  ++++L F+ +A  +FISA+    + +   
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T  L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTTILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|423693442|ref|ZP_17667962.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens SS101]
 gi|387998485|gb|EIK59814.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens SS101]
          Length = 489

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/443 (43%), Positives = 280/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+II+DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   LV NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+   +  +F  +G+G+   ++  +G GI   LE I   + P               
Sbjct: 120 IDNIDPEAARAEFSPMGLGDAIPVAGAHGRGITQMLE-IALRDFPKDDVEEEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|422403708|ref|ZP_16480765.1| GTP-binding protein Der, partial [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330874711|gb|EGH08860.1| GTP-binding protein Der [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 440

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/441 (42%), Positives = 280/441 (63%), Gaps = 17/441 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKST+FNRLT +RDA+V +  GLTRDR YGE     +S+I+IDTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+ +++  +F  +G+G+   ++  +G GI   LE I   E P               
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEEVEEV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +   +R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
           +S+ + + S++    TSR+T+ L  A+  H P      R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTF 426
           +++ +   Y RYLE  + R  
Sbjct: 419 QVEKVPKSYVRYLENTYRRVL 439


>gi|312962901|ref|ZP_07777388.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6]
 gi|311282928|gb|EFQ61522.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6]
          Length = 489

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/443 (43%), Positives = 281/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+II+DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   L+ NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLIANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+   +  +F  +G+G+   I+  +G GI   LE  L  + P               
Sbjct: 120 IDNIDPEQARAEFSPMGLGDAIPIAGAHGRGITQMLEVALR-DFPKDDAEEEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N++KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|408480044|ref|ZP_11186263.1| GTP-binding protein Der [Pseudomonas sp. R81]
          Length = 489

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/443 (43%), Positives = 281/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+II+DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+  ++  +F  +G+G+   I+  +G GI   LE  L+   P               
Sbjct: 120 IDNIDPELARAEFSPMGLGDAIPIAGAHGRGITQMLEIALS-SFPKDNAEEEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|260549069|ref|ZP_05823290.1| small GTP-binding domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|425741719|ref|ZP_18859858.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-487]
 gi|445437392|ref|ZP_21441038.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC021]
 gi|260407797|gb|EEX01269.1| small GTP-binding domain-containing protein [Acinetobacter sp.
           RUH2624]
 gi|425491430|gb|EKU57714.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-487]
 gi|444753974|gb|ELW78610.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC021]
          Length = 469

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/430 (44%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE++L  ++P      + E    H 
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DVP------EDENPEEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|394987684|ref|ZP_10380523.1| hypothetical protein SCD_00084 [Sulfuricella denitrificans skB26]
 gi|393792903|dbj|GAB70162.1| hypothetical protein SCD_00084 [Sulfuricella denitrificans skB26]
          Length = 419

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/352 (51%), Positives = 251/352 (71%), Gaps = 7/352 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F+D LNGD+L+LRPEGTAS +R+VI++NL+Y+ P+RL+Y+GPMFRHE
Sbjct: 56   GEVTDIVEKEMYTFVDALNGDSLTLRPEGTASCVRAVIQHNLLYNAPQRLYYTGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVE++G+ GPD+DAE IIM +RLWK L L +I L++N++G+  +R +
Sbjct: 116  RPQKGRYRQFHQVGVESLGYAGPDMDAEHIIMTARLWKRLGLNDIALQINTLGSSADRIR 175

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   L++Y+ +H D     ED +  L  N LRVLDSKN  ++E++  APKLLD L++ SL
Sbjct: 176  HRSRLVHYLGQHVD--MLDEDSRRRLQTNPLRVLDSKNPSLQELIEAAPKLLDDLDEASL 233

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  +Q +L    I Y+IN +LVRG+DYYN TVFEW T +LG+Q ++C GGRYD LI++
Sbjct: 234  KHFEDLQVMLRAAGIEYQINPRLVRGLDYYNFTVFEWVTTQLGAQGTVCAGGRYDGLIEQ 293

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFA+G+ERL+ L+++ N         D+Y+VH G  A   A   +E LR  
Sbjct: 294  IGGKPAPACGFAMGVERLLALLEE-NAFQAPRVATDVYLVHQGDAANKFAMAAAEQLRDQ 352

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL V+L+C       SFKSQMK+A++S A +A IIG++E     + +K LR 
Sbjct: 353  GLHVLLHCGGG----SFKSQMKKADSSGARYALIIGDDEAGAGEVTLKPLRE 400


>gi|427814224|ref|ZP_18981288.1| histidyl-tRNA synthetase [Bordetella bronchiseptica 1289]
 gi|410565224|emb|CCN22777.1| histidyl-tRNA synthetase [Bordetella bronchiseptica 1289]
          Length = 428

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 255/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L ++S 
Sbjct: 180  HRAALIEHLERHQDI--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEESR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 238  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 298  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR +   D   
Sbjct: 357  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGQVGADAAQ 412

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 413  QQVPLA 418


>gi|427821307|ref|ZP_18988370.1| histidyl-tRNA synthetase [Bordetella bronchiseptica D445]
 gi|410572307|emb|CCN20579.1| histidyl-tRNA synthetase [Bordetella bronchiseptica D445]
          Length = 428

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 254/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN +++E+  +AP+L D+L + S 
Sbjct: 180  HRAALIEHLERHQDV--LDEDGRRRMYSNPLRVLDTKNPVMQEMADSAPRLFDFLGEASR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 238  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 298  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 357  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 412

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 413  QQVPLA 418


>gi|412338302|ref|YP_006967057.1| histidyl-tRNA synthetase [Bordetella bronchiseptica 253]
 gi|408768136|emb|CCJ52895.1| histidyl-tRNA synthetase [Bordetella bronchiseptica 253]
          Length = 428

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/352 (49%), Positives = 248/352 (70%), Gaps = 7/352 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L ++S 
Sbjct: 180  HRAALIEHLERHQDV--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEESR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD LI+ 
Sbjct: 238  SHFDGVCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLIEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 298  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAAQVGEQLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR 
Sbjct: 357  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRG 404


>gi|205829851|sp|Q82XV4.2|RLMN_NITEU RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
          Length = 379

 Score =  372 bits (956), Expect = e-100,   Method: Composition-based stats.
 Identities = 178/353 (50%), Positives = 238/353 (67%), Gaps = 15/353 (4%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           E+GE P+RA+QL +W+H+ G +DF +M+DL+   R KL     ++ P I+SD  + DGTR
Sbjct: 18  EMGEKPYRARQLLRWVHQSGKTDFMEMSDLAKGFRHKLMECAVVQLPEIVSDHTAGDGTR 77

Query: 595 KWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KW+      N +E VFIPE +R TLC+S+QVGCA+ C FCSTGRQGF RNL+V EIIGQL
Sbjct: 78  KWLLSTGAGNAVEMVFIPEPSRGTLCVSSQVGCALACSFCSTGRQGFNRNLSVAEIIGQL 137

Query: 654 WVTE----------FKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILS 703
           W             F L   +      + +R +TN+VMMGMGEPL N+++ + AL L+LS
Sbjct: 138 WWANRLLEAGSHDPFPLDTTRVQTDKPETRRPVTNVVMMGMGEPLANFENLVTALDLMLS 197

Query: 704 DHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKEL 763
           D AYGLSRR V +STSG++P +D+L + CPV LAVSLHA N+ LR++LVPI+KKYP+++L
Sbjct: 198 DDAYGLSRRRVTVSTSGLVPALDRLRERCPVALAVSLHAPNDALRDQLVPINKKYPIRDL 257

Query: 764 ILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFP 823
           + AC RY+  +PR  ITFEY ML G+ND+   A EL+ L+R       CK+NLIPFN F 
Sbjct: 258 LAACERYLPAAPRDFITFEYVMLKGVNDSVALARELVQLVRN----VPCKLNLIPFNAFS 313

Query: 824 NSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
            S    S    I  F  +LM +GI  T+RK RG+DI AACGQL+G+  D  ++
Sbjct: 314 GSGYERSGAEAIGNFRDVLMQAGIVTTVRKTRGDDIAAACGQLAGQVRDKTRR 366


>gi|296136231|ref|YP_003643473.1| histidyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295796353|gb|ADG31143.1| histidyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 425

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/353 (50%), Positives = 242/353 (68%), Gaps = 8/353 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+V+R+ IE++L+YDG KRLWY+GPMFRHE
Sbjct: 57   GEVTDIVEKEMYSFTDALNGEPLTLRPEGTAAVVRACIEHSLLYDGGKRLWYTGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKN-ICLELNSIGNFNERK 986
            RPQ GRYRQF+Q+G EA+GF GPD+D ELI+M  +LW  L L   + LE+N +G  +ER 
Sbjct: 117  RPQRGRYRQFHQVGAEALGFAGPDVDVELILMARQLWARLGLSELVTLEINCLGQADERA 176

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
            ++ + LI Y+++H D     ED +  L+ N LRVLDSKN  ++ ++  APKL+DYL + S
Sbjct: 177  RHRVALIAYLEQHIDQ--LDEDARRRLHSNPLRVLDSKNPAMQALVEGAPKLIDYLGEAS 234

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
            L HF G+Q +L     S+ +N +LVRG+DYYN TVFEW TD+LG+Q ++C GGRYD LI+
Sbjct: 235  LAHFEGVQALLRAAGQSFTLNPRLVRGLDYYNLTVFEWVTDRLGAQATVCAGGRYDGLIE 294

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  PA G+A+G+ER++EL+ +   N   S     Y V    E   +   L E+LR 
Sbjct: 295  QIGGKRTPACGWALGMERVLELLIEAGQNAPVSAP-HAYAVMTSPELMSRVMPLCESLRA 353

Query: 1167 LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
             G++V L+        S KSQMK+A+AS A +A + GE E+ +  + IKDLR 
Sbjct: 354  AGVRVQLHMGGG----SMKSQMKKADASGARWALVFGEQELQSGQVGIKDLRG 402


>gi|33597411|ref|NP_885054.1| histidyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33573838|emb|CAE38146.1| histidyl-tRNA synthetase [Bordetella parapertussis]
          Length = 434

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 254/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 66   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 125

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 126  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 185

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L ++S 
Sbjct: 186  HRAALIEHLERHQDI--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEESR 243

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 244  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 303

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 304  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 362

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 363  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 418

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 419  QQVPLA 424


>gi|333913252|ref|YP_004486984.1| histidyl-tRNA synthetase [Delftia sp. Cs1-4]
 gi|333743452|gb|AEF88629.1| Histidyl-tRNA synthetase [Delftia sp. Cs1-4]
          Length = 431

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/358 (48%), Positives = 247/358 (68%), Gaps = 15/358 (4%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D+LNG+ L+LRPEGTAS++R+ IENNL+YDG KR+WY GPMFRHE
Sbjct: 59   GEVTDIVEKEMYSFEDKLNGERLTLRPEGTASLVRATIENNLLYDGGKRMWYMGPMFRHE 118

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIG EA+GF GPD+DAELI++   LWK L L    LE+NS+G   ER+ 
Sbjct: 119  RPQRGRYRQFHQIGAEALGFAGPDVDAELIMLAVSLWKQLGLTQWRLEINSLGQPEERQA 178

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y+++H+D     E+ K  +Y N LRVLD+KN  +++++  AP+LLD+L + SL
Sbjct: 179  HRQALIAYLEQHQDV--MDEEAKRRMYSNPLRVLDTKNPAMQDMVNGAPRLLDFLGEGSL 236

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G++ IL+ N + + +N +LVRG+DYYN TVFE+ TD LGSQ +IC GGRYD+LI++
Sbjct: 237  AHFDGLKAILDANGVPWTVNPRLVRGLDYYNLTVFEFITDMLGSQGTICAGGRYDYLIEQ 296

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININ------HNFSHQCDIYIVHVGKEAELKAFVLS 1161
               K  PA G+A+G+ER++EL+K++  +      H ++   D+  + V       A    
Sbjct: 297  VGGKSAPAVGWALGVERVLELVKELGTDIPAPTLHAYAIVPDVAAMPV-------ALRTL 349

Query: 1162 ENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            + LR  G++V ++        S KSQ K+A+AS A+FA I G +E+    + +K LR+
Sbjct: 350  QQLREAGVRVQMHAASAEGMGSMKSQFKKADASGAHFALIFGSDELQQGLVTVKSLRD 407


>gi|440741236|ref|ZP_20920685.1| GTP-binding protein Der [Pseudomonas fluorescens BRIP34879]
 gi|447918218|ref|YP_007398786.1| GTP-binding protein Der [Pseudomonas poae RE*1-1-14]
 gi|440373217|gb|ELQ09982.1| GTP-binding protein Der [Pseudomonas fluorescens BRIP34879]
 gi|445202081|gb|AGE27290.1| GTP-binding protein Der [Pseudomonas poae RE*1-1-14]
          Length = 489

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/443 (42%), Positives = 280/443 (63%), Gaps = 16/443 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+II+DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD R G    D++I   LRK  +   L+ NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLIANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
            +NI+   +  +F  +G+G+   ++  +G GI   LE I   + P               
Sbjct: 120 IDNIDPEAARAEFSPMGLGDAIPVAGAHGRGITQMLE-IALRDFPKDDAEEEEGEEEIVA 178

Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
           +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238

Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
            N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+ 
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298

Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
            F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +   
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358

Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
           S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418

Query: 407 LKYIGNDYKRYLEKYFYRTFSLI 429
           ++ +   Y RYLE  + R   L+
Sbjct: 419 IEKVPKSYVRYLENTYRRVLKLV 441


>gi|425745652|ref|ZP_18863695.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-323]
 gi|425488090|gb|EKU54430.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-323]
          Length = 469

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/430 (43%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DII+F+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GENEGGIDSY-MAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLGKKVHLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE +L  E+P      + E  + H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-EVP------EDENPDEHN 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   +E + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRQYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|359430006|ref|ZP_09221022.1| GTPase Der [Acinetobacter sp. NBRC 100985]
 gi|358234560|dbj|GAB02561.1| GTPase Der [Acinetobacter sp. NBRC 100985]
          Length = 469

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/430 (43%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DII+F+VD R GL+  D+ I   LR  G+ + LV NK
Sbjct: 61  GESEGGIDSY-MAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLGKKVHLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +FY+LG+G P  ++A +G G++  LE +L  E+P      + E  + H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-EVP------EDENPDEHN 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   +E + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRQYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|33602151|ref|NP_889711.1| histidyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|39932137|sp|Q7WHN1.1|SYH_BORBR RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|46397794|sp|Q7W6P7.2|SYH_BORPA RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|33576589|emb|CAE33667.1| histidyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 428

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 254/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L ++S 
Sbjct: 180  HRAALIEHLERHQDI--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEESR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 238  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 298  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 357  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 412

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 413  QQVPLA 418


>gi|319941514|ref|ZP_08015841.1| ribosomal RNA large subunit methyltransferase N [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804988|gb|EFW01827.1| ribosomal RNA large subunit methyltransferase N [Sutterella
           wadsworthensis 3_1_45B]
          Length = 400

 Score =  372 bits (954), Expect = e-99,   Method: Composition-based stats.
 Identities = 180/355 (50%), Positives = 241/355 (67%), Gaps = 5/355 (1%)

Query: 523 DFAESIDKNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPH 582
           DF  +  K     +GE PFRA+QL +W+H+  V DFN+MTDL+ + R KL     I+ P 
Sbjct: 29  DFDAAGLKAWCESIGEKPFRARQLTRWVHRHLVCDFNEMTDLAKTFRAKLLKLAEIRPPE 88

Query: 583 IMSDQISFDGTRKWIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFV 641
           ++ ++ S DGTRKW+F V   N +E VFIPE +R TLCIS+Q GCA+ C+FCSTG+QGF 
Sbjct: 89  VIHEKKSSDGTRKWLFAVGNGNAVEAVFIPEDDRGTLCISSQAGCAMGCLFCSTGKQGFN 148

Query: 642 RNLTVGEIIGQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLI 701
           RNLT  EI+GQLW  E +L R++ I       R I+N+V+MGMGEPL N  + I A+K+ 
Sbjct: 149 RNLTTAEIVGQLWTAERELCRDRGI--TDPNDRVISNVVLMGMGEPLQNLDAVIPAIKIF 206

Query: 702 LSDHAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLK 761
           L D  YGLSRR V +STSG++  IDKLA+  PV LAVSLHA+++ LR+KL+PI+KK+PL 
Sbjct: 207 LDDDGYGLSRRRVTVSTSGLVRQIDKLAEAAPVALAVSLHAADDGLRDKLMPINKKHPLG 266

Query: 762 ELILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNC 821
           +L+ AC RY+  +PR  ITFEY ML GIND+   A  L +L+R+  +   CK NLIPFN 
Sbjct: 267 DLMAACRRYLRVAPRDFITFEYVMLGGINDSLADADHLAALVRREHV--PCKFNLIPFNP 324

Query: 822 FPNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           FP S+L      ++  F + L   G   T+RK RG+DI+AACGQL+GE  D  ++
Sbjct: 325 FPQSDLEKPDREKVLAFCRRLNELGYVTTVRKTRGDDIDAACGQLAGEVRDRTRR 379


>gi|33593202|ref|NP_880846.1| histidyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|384204499|ref|YP_005590238.1| histidyl-tRNA synthetase [Bordetella pertussis CS]
 gi|33563577|emb|CAE42476.1| histidyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382613|gb|AEE67460.1| histidyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 434

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 253/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 66   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 125

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 126  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 185

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L + S 
Sbjct: 186  HRAALIEHLERHQDV--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEASR 243

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 244  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 303

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 304  LGGKPTPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 362

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 363  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 418

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 419  QQVPLA 424


>gi|410694041|ref|YP_003624663.1| histidine tRNA synthetase [Thiomonas sp. 3As]
 gi|294340466|emb|CAZ88847.1| histidine tRNA synthetase [Thiomonas sp. 3As]
          Length = 425

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 176/353 (49%), Positives = 242/353 (68%), Gaps = 8/353 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPEGTA+V+R+ IE++L+YDG KRLWY+GPMFRHE
Sbjct: 57   GEVTDIVEKEMYSFTDALNGEPLTLRPEGTAAVVRACIEHSLLYDGGKRLWYTGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKN-ICLELNSIGNFNERK 986
            RPQ GRYRQF+Q+G EA+GF GPD+D ELI+M  +LW  L L   + LE+N +G  +ER 
Sbjct: 117  RPQRGRYRQFHQVGAEALGFAGPDVDVELILMARQLWARLGLSELVTLEINCLGQADERA 176

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
            ++ + LI Y+++H D     ED +  L+ N LRVLD+KN  ++ ++  APKL+DYL + S
Sbjct: 177  RHRVALIAYLEQHIDQ--LDEDTRRRLHSNPLRVLDTKNPAMQALVEGAPKLIDYLGEAS 234

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
            L HF G+Q +L     S+ +N +LVRG+DYYN TVFEW TD+LG+Q ++C GGRYD LI+
Sbjct: 235  LAHFEGVQALLRAAGQSFTLNPRLVRGLDYYNLTVFEWVTDRLGAQATVCAGGRYDGLIE 294

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  PA G+A+G+ER++EL+ +   N   S     Y V    E   +   L E+LR 
Sbjct: 295  QIGGKPTPACGWALGMERVLELLIEAGQNAPVSAP-HAYAVMTSPELMSRVMPLCESLRA 353

Query: 1167 LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
             G++V L+        S KSQMK+A+AS A +A + GE E+ +  + IKDLR 
Sbjct: 354  AGVRVQLHMGGG----SMKSQMKKADASGARWALVFGEQELQSGQVGIKDLRG 402


>gi|427821835|ref|ZP_18988897.1| histidyl-tRNA synthetase [Bordetella bronchiseptica Bbr77]
 gi|410587100|emb|CCN02130.1| histidyl-tRNA synthetase [Bordetella bronchiseptica Bbr77]
          Length = 428

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 253/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L + S 
Sbjct: 180  HRAALIEHLERHQDV--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEASR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 238  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 298  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 357  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 412

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 413  QQVPLA 418


>gi|408415650|ref|YP_006626357.1| histidyl-tRNA synthetase [Bordetella pertussis 18323]
 gi|401777820|emb|CCJ63161.1| histidyl-tRNA synthetase [Bordetella pertussis 18323]
          Length = 434

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 253/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 66   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 125

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 126  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 185

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L + S 
Sbjct: 186  HRAALIEHLERHQDV--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEASR 243

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 244  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 303

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 304  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 362

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 363  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 418

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 419  QQVPLA 424


>gi|398864938|ref|ZP_10620466.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM78]
 gi|398244330|gb|EJN29887.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM78]
          Length = 490

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 190/444 (42%), Positives = 281/444 (63%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +S+I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+  ++  +F  LG+G+   I+  +G GI   LE I   + P               
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLE-IALGDFPKDEDEPQEGEEEEDV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  ESGR+L++ +NKWD +  ++R  +K  ++++L F+ +A  +FISA+    + +  
Sbjct: 299 LGFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
            S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QIEKVPKSYVRYLENTYRRVLKLV 442


>gi|46397793|sp|Q7VWL1.2|SYH_BORPE RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
          Length = 428

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 253/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 60   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 119

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 120  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 179

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D+L + S 
Sbjct: 180  HRAALIEHLERHQDV--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDFLGEASR 237

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 238  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 297

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 298  LGGKPTPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 356

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 357  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 412

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 413  QQVPLA 418


>gi|424056992|ref|ZP_17794509.1| GTPase Der [Acinetobacter nosocomialis Ab22222]
 gi|407440525|gb|EKF47042.1| GTPase Der [Acinetobacter nosocomialis Ab22222]
          Length = 469

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 189/430 (43%), Positives = 292/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   LR  G+ I LV NK
Sbjct: 61  GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  +L +F++LG+G P  ++A +G G++  LE++L  ++P      + E    H 
Sbjct: 120 VDGVHAEAALVEFFKLGMGEPLQVAASHGRGVQQMLEDVLQ-DVP------EDENPEEHD 172

Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
            +  +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI   FE   +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFS++KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|330446670|ref|ZP_08310322.1| histidyl-tRNA synthetase [Photobacterium leiognathi subsp.
            mandapamensis svers.1.1.]
 gi|328490861|dbj|GAA04819.1| histidyl-tRNA synthetase [Photobacterium leiognathi subsp.
            mandapamensis svers.1.1.]
          Length = 422

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 181/372 (48%), Positives = 254/372 (68%), Gaps = 12/372 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TD+V+KEMY+F D  NGD+L+LRPEGTA  +R+ I+N L+Y+  +RLWY GPMFRHE
Sbjct: 57   GEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
            RPQ GRYRQF+Q+GVE  G  GPDIDAELI+M +RLW+ L + +++ LELNSIG+   R 
Sbjct: 116  RPQKGRYRQFHQVGVEVFGLNGPDIDAELIMMTARLWRELGIHEHVRLELNSIGSLEARA 175

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
            +Y   LI ++++H D     ED K  +Y N LRVLD+KN  I+EIL++APKL +YL+ +S
Sbjct: 176  EYRKALIAFLEQHLDV--LDEDAKRRMYTNPLRVLDTKNAAIQEILVDAPKLSEYLDPES 233

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
             +HF G+ ++L+   I Y++N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L++
Sbjct: 234  KEHFDGLCELLDAAGIKYQVNERLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVE 293

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  P+ GFA+G+ERL+ L++ +          D+Y+V  G+        L+E LRT
Sbjct: 294  QLGGKATPSVGFAMGLERLVLLMEALE-QDEVRRSVDVYVVTAGEGTLAAGMTLAEKLRT 352

Query: 1167 --LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDP 1224
               GL+V+ +    N    FK Q KRA+   A  A ++GENEI  NT+++KDL    E  
Sbjct: 353  EVSGLRVMTHFGGGN----FKKQFKRADNVGAAVALVLGENEIAENTVVVKDLHGG-EQT 407

Query: 1225 TLKQISISFKDA 1236
            T+ Q  ++ K A
Sbjct: 408  TMAQDEVAAKLA 419


>gi|410473480|ref|YP_006896761.1| histidyl-tRNA synthetase [Bordetella parapertussis Bpp5]
 gi|408443590|emb|CCJ50260.1| histidyl-tRNA synthetase [Bordetella parapertussis Bpp5]
          Length = 434

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 253/366 (69%), Gaps = 8/366 (2%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMY+F D LNGD+L++RPE TA ++R+ IE+N++YD P R++  GP+FRHE
Sbjct: 66   GEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHE 125

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QI VEA+GF GPD+DAE+I+M +RLWK L L+++ LELNS+G   ER  
Sbjct: 126  RPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAA 185

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI ++++H+D     ED +  +Y N LRVLD+KN  ++E+  +AP+L D L ++S 
Sbjct: 186  HRAALIEHLERHQDI--LDEDGRRRMYSNPLRVLDTKNPAMQEMADSAPRLFDLLGEESR 243

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF G+ + L    I Y++N +LVRG+DYYN TVFEW TD+LG+Q ++CGGGRYD L++ 
Sbjct: 244  SHFDGLCQRLADAGIEYRLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLVEL 303

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA GFAIG+ERL++L ++ ++      +C++YIVH G+E +  A  + E LR  
Sbjct: 304  LGGKPAPAVGFAIGMERLLDLWEQ-SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDA 362

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKY-EDPTL 1226
            GL VI++         FK+Q KRA+AS A  A I+G +E+ + T  IK LR     D   
Sbjct: 363  GLDVIVHAGAAG----FKAQFKRADASGARIAVILGGDEVASRTASIKHLRGPVGADAAQ 418

Query: 1227 KQISIS 1232
            +Q+ ++
Sbjct: 419  QQVPLA 424


>gi|378948963|ref|YP_005206451.1| protein EngA [Pseudomonas fluorescens F113]
 gi|423097167|ref|ZP_17084963.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens Q2-87]
 gi|359758977|gb|AEV61056.1| EngA [Pseudomonas fluorescens F113]
 gi|397884715|gb|EJL01198.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens Q2-87]
          Length = 490

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 189/444 (42%), Positives = 279/444 (62%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +++I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
            +NI+  ++  +F  LG+G    I+  +G GI   LE  L    P               
Sbjct: 120 VDNIDPDMARAEFAPLGMGQAIPIAGAHGRGITQMLEIALE-SFPKDDAEEPEDGEEEIV 178

Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
            +  + K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
            S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QIEKVPKSYVRYLENTYRRVLKLV 442


>gi|30248171|ref|NP_840241.1| hypothetical protein NE0145 [Nitrosomonas europaea ATCC 19718]
 gi|30180056|emb|CAD84056.1| Conserved hypothetical protein 48 [Nitrosomonas europaea ATCC
           19718]
          Length = 361

 Score =  370 bits (951), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 177/352 (50%), Positives = 237/352 (67%), Gaps = 15/352 (4%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE P+RA+QL +W+H+ G +DF +M+DL+   R KL     ++ P I+SD  + DGTRK
Sbjct: 1   MGEKPYRARQLLRWVHQSGKTDFMEMSDLAKGFRHKLMECAVVQLPEIVSDHTAGDGTRK 60

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+      N +E VFIPE +R TLC+S+QVGCA+ C FCSTGRQGF RNL+V EIIGQLW
Sbjct: 61  WLLSTGAGNAVEMVFIPEPSRGTLCVSSQVGCALACSFCSTGRQGFNRNLSVAEIIGQLW 120

Query: 655 VTE----------FKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSD 704
                        F L   +      + +R +TN+VMMGMGEPL N+++ + AL L+LSD
Sbjct: 121 WANRLLEAGSHDPFPLDTTRVQTDKPETRRPVTNVVMMGMGEPLANFENLVTALDLMLSD 180

Query: 705 HAYGLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELI 764
            AYGLSRR V +STSG++P +D+L + CPV LAVSLHA N+ LR++LVPI+KKYP+++L+
Sbjct: 181 DAYGLSRRRVTVSTSGLVPALDRLRERCPVALAVSLHAPNDALRDQLVPINKKYPIRDLL 240

Query: 765 LACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPN 824
            AC RY+  +PR  ITFEY ML G+ND+   A EL+ L+R       CK+NLIPFN F  
Sbjct: 241 AACERYLPAAPRDFITFEYVMLKGVNDSVALARELVQLVRN----VPCKLNLIPFNAFSG 296

Query: 825 SNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
           S    S    I  F  +LM +GI  T+RK RG+DI AACGQL+G+  D  ++
Sbjct: 297 SGYERSGAEAIGNFRDVLMQAGIVTTVRKTRGDDIAAACGQLAGQVRDKTRR 348


>gi|423695459|ref|ZP_17669949.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens Q8r1-96]
 gi|388009632|gb|EIK70883.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens Q8r1-96]
          Length = 490

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 189/444 (42%), Positives = 278/444 (62%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +++I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            +NI+  ++  +F  LG+G    I+  +G GI   LE  L    P     +         
Sbjct: 120 VDNIDPDMARAEFAPLGMGQAIPIAGAHGRGITQMLEIALE-SFPKDDVEEPEEGEEEIV 178

Query: 172 ------KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
                 K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
            S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QIEKVPKSYVRYLENTYRRVLKLV 442


>gi|49529777|emb|CAG67489.1| putative GTP-binding protein EngA [Acinetobacter sp. ADP1]
          Length = 478

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 187/430 (43%), Positives = 290/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 10  MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 69

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   +R  G+ + LV NK
Sbjct: 70  GEGEAGIDAY-MAEQSKTAIHEADIIIFVVDARAGLLASDEQIAREIRSLGKKVYLVANK 128

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  ++ +FY+LG G P  ++A +G G+   LE++L +++P      + E    H 
Sbjct: 129 VDGVHAEAAVVEFYKLGFGEPLHVAASHGRGVAQMLEDVL-VDVP------EDENPEDHD 181

Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + ++Y LIDTA
Sbjct: 182 KATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 241

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFSV+KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 242 GVRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 301

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 302 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 361

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 362 VSPAKLTQILNDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 421

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 422 ENVFRKVYKL 431


>gi|161349970|ref|YP_045311.2| GTP-binding protein EngA [Acinetobacter sp. ADP1]
          Length = 469

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 187/430 (43%), Positives = 290/430 (67%), Gaps = 10/430 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+     KSFI++DTGG 
Sbjct: 1   MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
                    + M +Q+K AI E+DIIIF+VD R GL+  D+ I   +R  G+ + LV NK
Sbjct: 61  GEGEAGIDAY-MAEQSKTAIHEADIIIFVVDARAGLLASDEQIAREIRSLGKKVYLVANK 119

Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
            + +++  ++ +FY+LG G P  ++A +G G+   LE++L +++P      + E    H 
Sbjct: 120 VDGVHAEAAVVEFYKLGFGEPLHVAASHGRGVAQMLEDVL-VDVP------EDENPEDHD 172

Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI   FE + ++Y LIDTA
Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ K  E+IEKFSV+KTL+++ +A+VV++++DA++ I  QD+++  +  E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            +NKWD++    RK  K +++++ +F+ +A  + ISA+    +     SI+  Y+S+ + 
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           +S +++T+ L  A + H P      R K+RYAH GG+NPP IVIHGN++     DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412

Query: 419 EKYFYRTFSL 428
           E  F + + L
Sbjct: 413 ENVFRKVYKL 422


>gi|392950829|ref|ZP_10316384.1| GTPase family protein [Hydrocarboniphaga effusa AP103]
 gi|391859791|gb|EIT70319.1| GTPase family protein [Hydrocarboniphaga effusa AP103]
          Length = 474

 Score =  370 bits (949), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 195/436 (44%), Positives = 264/436 (60%), Gaps = 17/436 (3%)

Query: 3   PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI---GK-KSFIIIDTG 58
           PVLVLVGRPNVGKSTLFNRLT +RDALVA+Y GLTRDR YG G     G+ ++FI++DTG
Sbjct: 6   PVLVLVGRPNVGKSTLFNRLTGTRDALVADYVGLTRDRQYGRGVFEIDGQGRAFIVVDTG 65

Query: 59  GFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
           G  PE    +     +Q + A+ E+D I F+ D   G    D+ I   LRK G+P+ L++
Sbjct: 66  GLMPESADPLAVLAEEQAQLALSEADHIFFLTDAIAGRHGSDEAIAAQLRKLGKPLTLLV 125

Query: 119 NKSEN-----INSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE 173
           NK+E             DFY LG+G P  ISA  G+G+   L  +L       + F   E
Sbjct: 126 NKTEGKARGGAKGVAVADFYALGLGEPEPISAENGDGVPGLLRRVL-------EKFPAGE 178

Query: 174 FTNIHSIE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKY 232
              +  +   ++VAIVG+PNVGKSTL+N L+G+ RV+  D PGTTRD+I+  FEY    Y
Sbjct: 179 PDELAEVPGEVRVAIVGRPNVGKSTLVNRLVGDERVVAADRPGTTRDAIRVPFEYEGNAY 238

Query: 233 ILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES 292
            LIDTAGIRRR++  EVIEKFS++KTL++I  A+VVI+++DA  ++  QD  +   + + 
Sbjct: 239 TLIDTAGIRRRSRVEEVIEKFSIVKTLQAIESAHVVIVVVDAHADVGEQDARLMGLVAQR 298

Query: 293 GRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVY 352
           GR++I+ VNKWD +    R+  K  +  K+ FL F   ++ISA   + +   M  +   Y
Sbjct: 299 GRAMILAVNKWDGLDPGDREQTKYKVGLKMPFLDFTPVHYISAKHGSGVGVVMRDVKTAY 358

Query: 353 DSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGN 412
           DS++  L T  +TR L  ++  H P      R KLRYAHQGG NPP IVIHGN+   +  
Sbjct: 359 DSTMKDLPTPELTRILERSVDRHAPPAVLGRRIKLRYAHQGGSNPPQIVIHGNQTDKLPV 418

Query: 413 DYKRYLEKYFYRTFSL 428
            YKRYL   F   F L
Sbjct: 419 TYKRYLANEFRNHFEL 434


>gi|90579364|ref|ZP_01235174.1| histidyl-tRNA synthetase [Photobacterium angustum S14]
 gi|90440197|gb|EAS65378.1| histidyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 422

 Score =  370 bits (949), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 181/372 (48%), Positives = 254/372 (68%), Gaps = 12/372 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TD+V+KEMY+F D  NGD+L+LRPEGTA  +R+ I+N L+Y+  +RLWY GPMFRHE
Sbjct: 57   GEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
            RPQ GRYRQF+Q+GVE  G  GPDIDAELI+M +RLW+ L + +++ LELNSIG+   R 
Sbjct: 116  RPQKGRYRQFHQVGVEVFGLNGPDIDAELIMMTARLWRELGIHEHVRLELNSIGSLEARA 175

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
            +Y   LI ++++H D     ED K  +Y N LRVLD+KN  I+EIL++APKL +YL+ +S
Sbjct: 176  EYRKALIAFLEQHLDV--LDEDAKRRMYTNPLRVLDTKNSAIQEILVDAPKLSEYLDPES 233

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
             +HF G+ ++L+   I Y++N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L++
Sbjct: 234  KEHFDGLCELLDAAGIKYQVNERLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVE 293

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  P+ GFA+G+ERL+ L++ +          D+Y+V  G+        L+E LRT
Sbjct: 294  QLGGKATPSVGFAMGLERLVLLMEALE-QDEVRRSVDVYVVTAGEGTLAVGMTLAEKLRT 352

Query: 1167 --LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDP 1224
               GL+V+ +    N    FK Q KRA+   A  A ++GENEI  NT+++KDL    E  
Sbjct: 353  EVSGLRVMTHFGGGN----FKKQFKRADNVGAAVALVLGENEIAENTVVVKDLHGG-EQT 407

Query: 1225 TLKQISISFKDA 1236
            T+ Q  ++ K A
Sbjct: 408  TMAQDEVAAKLA 419


>gi|220935219|ref|YP_002514118.1| radical SAM protein [Thioalkalivibrio sulfidophilus HL-EbGr7]
 gi|219996529|gb|ACL73131.1| radical SAM protein [Thioalkalivibrio sulfidophilus HL-EbGr7]
          Length = 376

 Score =  370 bits (949), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 176/345 (51%), Positives = 242/345 (70%), Gaps = 7/345 (2%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           +GE PFRA Q+ KWIH+  V DF  MTDLS +LR++L     I+AP ++ DQ S DGT K
Sbjct: 24  MGEKPFRAVQVLKWIHQHWVEDFQDMTDLSKALRERLAQVAEIRAPEVVYDQASADGTHK 83

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  +   N IETVFIPEK+R TLC+S+QVGCA++C FCST RQGF RNL+  EI+GQLW
Sbjct: 84  WLLRLDDGNCIETVFIPEKDRGTLCVSSQVGCALDCTFCSTARQGFNRNLSSAEIVGQLW 143

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           +   +L  E+ +      +R ++N+V+MGMGEPLLN+ + + A++L+L D+AYGLS+R V
Sbjct: 144 LANRRLAPERTVA-GKAPERVVSNVVLMGMGEPLLNFDNVVDAMRLMLDDNAYGLSKRRV 202

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSGI+P +D+L +   V LAVSLHA N+ LR++LVPI++KYP+ EL+ AC RY+   
Sbjct: 203 TLSTSGIVPAMDRLKETLDVALAVSLHAPNDALRDELVPINRKYPIAELLDACRRYVREE 262

Query: 775 PRHM-ITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
             H  ITFEY ML G+ND+  HA +LI+L+R       CKINLIPFN FP +    S ++
Sbjct: 263 RHHQRITFEYVMLEGVNDSPEHARQLIALLRD----VPCKINLIPFNPFPETRYRRSGDA 318

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEM 878
            I+ F ++L N+G     R+ RG+DI+AACGQL G+  D  ++ +
Sbjct: 319 AIRRFQEMLANAGYTTITRRTRGDDIDAACGQLVGKVADRSRRAL 363


>gi|254490112|ref|ZP_05103304.1| radical SAM enzyme, Cfr family [Methylophaga thiooxidans DMS010]
 gi|224464700|gb|EEF80957.1| radical SAM enzyme, Cfr family [Methylophaga thiooxydans DMS010]
          Length = 367

 Score =  369 bits (948), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 176/339 (51%), Positives = 236/339 (69%), Gaps = 11/339 (3%)

Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
           ELGE PFRA+QL +WIHK+ V DF +MT+LS +LR+KL+    I+ P ++ + IS DGTR
Sbjct: 21  ELGEKPFRARQLLQWIHKYRVVDFAEMTNLSKALREKLQAVSDIRLPEVLHEHISTDGTR 80

Query: 595 KWIFHVK-KNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
           KWI  +   N IETVFIPE  R TLC+S+QVGCA+ C FCST +QGF RNL   EII QL
Sbjct: 81  KWIIKLSCGNAIETVFIPEGGRGTLCVSSQVGCALTCTFCSTAQQGFNRNLDAAEIIAQL 140

Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
           W+    L ++       +G R +TN+VMMGMGEPL NY + + A+ L+  D+ YG+S R 
Sbjct: 141 WIANEALGKD------PKGNRVVTNVVMMGMGEPLANYNNVVTAMNLMRDDYGYGISWRR 194

Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
           + LSTSGI+PMIDKL ++C V LA+SLHA+N+ LR+++VPI++KYP+KEL+ AC RY+  
Sbjct: 195 LTLSTSGIVPMIDKLREDCHVSLAISLHAANDELRDQIVPINQKYPIKELLAACKRYVVG 254

Query: 774 SPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNS 833
             R  IT EY ML GIND+   A +L+ +++        KIN+IPFN FP ++  CS  +
Sbjct: 255 QQRRHITVEYVMLDGINDSMQDAKDLVRILKD----LPTKINMIPFNPFPGTDYTCSSRN 310

Query: 834 RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
           +IK F   L+  G+  T+RK RG+DI AACGQL+GE  D
Sbjct: 311 QIKRFQNYLIEQGMVATVRKTRGDDIVAACGQLAGEVQD 349


>gi|331005663|ref|ZP_08329030.1| GTP-binding protein EngA [gamma proteobacterium IMCC1989]
 gi|330420521|gb|EGG94820.1| GTP-binding protein EngA [gamma proteobacterium IMCC1989]
          Length = 482

 Score =  369 bits (948), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 193/438 (44%), Positives = 277/438 (63%), Gaps = 12/438 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT  RDA+VA++ GLTRDR YGE    ++ F+ +DTGG 
Sbjct: 1   MLPVIALVGRPNVGKSTLFNRLTRRRDAIVADFAGLTRDRQYGEVIWEERRFLFVDTGGL 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + ++GI   M +Q+  AI E+D+++F+VD + GL+  D  I   LR + + +++V NK
Sbjct: 61  SGD-EEGIDSAMAEQSLLAIEEADLVLFMVDCKAGLLPSDIAIAKHLRTTEKKVLIVANK 119

Query: 121 SENINSSISLD-FYELGIGNPHIISALYGNGIKNFLENILTIELPY---------KKFFK 170
            +  +  + +  FYELG+G  H  +A +G G+   ++ + T  LP           +   
Sbjct: 120 VDGHDPDVVIGPFYELGLGEIHATTATHGRGVNLLMQQVDTC-LPVVIDDVTENITEDVD 178

Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
             E  +   +  IK+AIVG+PNVGKSTL+N +LGE+RV+ YD  GTTRDSI   +E + K
Sbjct: 179 TTEGEDEEQLAAIKIAIVGRPNVGKSTLVNRMLGEDRVVVYDEAGTTRDSIYINYERHGK 238

Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
            Y +IDTAGIRRR      +EKFS++KTL+SI +ANVV+LLLDA + +  QD+++   + 
Sbjct: 239 PYTIIDTAGIRRRKNISLTVEKFSIVKTLQSIEDANVVVLLLDASEGVVDQDLHLMGHVI 298

Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
           ESGR+L+V +NKWD +    ++ +K+ ++++L F+ FA  +FISA+    + +  +SI  
Sbjct: 299 ESGRALVVALNKWDGLEAEFKEYVKSELERRLRFVDFADMHFISALHGTGVGNLYKSIEK 358

Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
            + S+    ST+ +T  L  A K H P   +  R KLRYAH GG NPPIIVIHGN+   I
Sbjct: 359 AFASATDRFSTNHLTNVLQMATKEHQPPVVRGHRIKLRYAHAGGHNPPIIVIHGNQTADI 418

Query: 411 GNDYKRYLEKYFYRTFSL 428
              Y RYLEK F R   L
Sbjct: 419 PGHYVRYLEKTFRRVLDL 436


>gi|407938381|ref|YP_006854022.1| histidyl-tRNA ligase [Acidovorax sp. KKS102]
 gi|407896175|gb|AFU45384.1| histidyl-tRNA ligase [Acidovorax sp. KKS102]
          Length = 440

 Score =  369 bits (948), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 172/363 (47%), Positives = 256/363 (70%), Gaps = 4/363 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D LNG+ L+LRPE TA V+R+V E++++YDG KRL+Y GPMFRHE
Sbjct: 67   GEVTDIVEKEMYSFEDRLNGEQLTLRPEATAGVVRAVAEHSMLYDGGKRLYYMGPMFRHE 126

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+QIG EA+GFPG ++DAELI++ S LW++L L+N+ LELNS+G  +ERK 
Sbjct: 127  RPQRGRYRQFHQIGAEALGFPGAEVDAELILLASALWRDLGLQNVRLELNSLGQPDERKA 186

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y++KH D     E+ +  L+ N LR+LD+KN  ++ ++  AP+L+D+L ++SL
Sbjct: 187  HRAALIAYLEKHID--LLDEEARRRLHSNPLRILDTKNPAMQSVVEAAPRLIDFLGEESL 244

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             HF  ++ IL+ N +++ +N +LVRGMDYYN TVFE+ TD+LGSQ +ICGGGRYD+LI++
Sbjct: 245  AHFNAVKAILDANGVAWTVNPRLVRGMDYYNLTVFEFVTDQLGSQGTICGGGRYDYLIEQ 304

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+A+G+ER++EL+K+   +   S   D+Y +        +A   +E LR  
Sbjct: 305  IGGKAAPAVGWALGVERVLELLKE-QQSAPPSLAPDVYAIVPSTAVLPRAVTTAEQLRRH 363

Query: 1168 GLKVILNCVFN-NIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTL 1226
            G++V ++   + +   S KSQ K+A+AS A +A + G++E+    + +K LR+   + T 
Sbjct: 364  GIRVQMHAAPSLDGMGSMKSQFKKADASGAAYALVFGDDELSRGMVTVKALRDGAGEQTE 423

Query: 1227 KQI 1229
            + +
Sbjct: 424  RPL 426


>gi|389752497|ref|ZP_10191176.1| GTP-binding protein Der [Rhodanobacter sp. 115]
 gi|388432964|gb|EIL89946.1| GTP-binding protein Der [Rhodanobacter sp. 115]
          Length = 466

 Score =  369 bits (947), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 182/430 (42%), Positives = 281/430 (65%), Gaps = 8/430 (1%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGK-KSFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG     + + F+++DTGG
Sbjct: 1   MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRTNEERPFVVVDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
               +  G+     +Q + AI E+ +++F+VD R GL+ QD+ I + LR+SG+PI+  +N
Sbjct: 61  LS-GIDDGLDGLTARQVRLAIEEAQVLVFVVDARDGLLPQDRTILDELRRSGKPIIAAVN 119

Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
           K++ ++   +L +F   GI     +SA +  G ++ ++ +L + LP +    +++  +  
Sbjct: 120 KTDGLDEETALAEFAVFGIAATLPLSAAHNRGTEDLVDMLLPL-LPAEPDEAEEQVED-- 176

Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
               I+VAIVG+PN GKSTLIN LLGE+R+I  D  GTTRD I+   E + K+Y LIDTA
Sbjct: 177 --GSIRVAIVGRPNAGKSTLINRLLGEDRLIVSDVAGTTRDPIRVPLERDGKRYTLIDTA 234

Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
           G+RR+ +  E +EKFSVIKTL+SI  A VV++++DA++N++ QD+ +     E GR+L++
Sbjct: 235 GVRRKARVEEAVEKFSVIKTLQSIAAAQVVVIMIDARENLADQDLTLIGHAMEEGRALVI 294

Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
            VNKWD +   QR+  +  + ++L F+ +A   +ISA+  + +   M ++   + S+   
Sbjct: 295 AVNKWDGLDAYQREQCQRALDRRLVFVDWAKQVYISALHGSGLRELMRAVMRAHASATKE 354

Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
           L++S +TR L  A +++ P   +   PKLR+AH GG NPP +VIHG+R K+I   Y+RYL
Sbjct: 355 LNSSDLTRTLEKAYESYQPPLVRGHAPKLRFAHPGGSNPPTVVIHGSRTKHIAPAYRRYL 414

Query: 419 EKYFYRTFSL 428
           E +F + + L
Sbjct: 415 ENFFRKRYKL 424


>gi|54307959|ref|YP_128979.1| histidyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|50403647|sp|P62373.1|SYH_PHOPR RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA
            synthetase; Short=HisRS
 gi|46912385|emb|CAG19177.1| putative histidyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 422

 Score =  369 bits (946), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 180/373 (48%), Positives = 258/373 (69%), Gaps = 12/373 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TD+V+KEMY+F D  NGD+L+LRPEGTA  +R+ I+N L+Y+  +RLWY GPMFR+E
Sbjct: 57   GEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRYE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
            RPQ GRYRQF+Q+GVE  G  GPD+DAELI+M +RLW+ L + +++ LELNSIG+ + R 
Sbjct: 116  RPQKGRYRQFHQVGVEVFGLNGPDVDAELIMMTARLWRELGINQHVRLELNSIGSLDARA 175

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
             Y   LI ++++H +     ED K  ++ N LRVLD+KN  ++EIL++APKL +YL+ DS
Sbjct: 176  TYREALIAFLEQHLEV--LDEDCKRRMHTNPLRVLDTKNPAVQEILVDAPKLSEYLDDDS 233

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
              HF G+ ++L+   I Y++N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L++
Sbjct: 234  KAHFAGLCELLDAAGIEYQVNERLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVE 293

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR- 1165
            +   K  PA GFA+G+ERL+ L++ + +  +     D Y+V VG+   +    L+E LR 
Sbjct: 294  QLGGKATPAVGFAMGVERLVLLMETLEL-ADVRRSVDAYVVTVGEGTMMAGMKLAEKLRE 352

Query: 1166 -TLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDP 1224
               GL+V+ +    N    FK Q KRA+   A  A ++GENEI +NT+++KDLR   E  
Sbjct: 353  NVPGLRVMNHFGGGN----FKKQFKRADNVGAAIALVLGENEIADNTVVVKDLRGG-EQT 407

Query: 1225 TLKQISISFKDAE 1237
            T+ Q  ++ K AE
Sbjct: 408  TMAQDEVTAKLAE 420


>gi|171059548|ref|YP_001791897.1| histidyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170776993|gb|ACB35132.1| histidyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 433

 Score =  369 bits (946), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 172/363 (47%), Positives = 245/363 (67%), Gaps = 3/363 (0%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D++NGD L+LRPEGTA V+R+V+E++++Y+G KRL+Y GPMFRHE
Sbjct: 57   GEVTDIVEKEMYSFEDKMNGDALTLRPEGTAGVVRAVVEHSMLYEGGKRLFYIGPMFRHE 116

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+GVEA+GF GPD+DAE+I+M   LW++L L ++ LELNS+G  +ER+ 
Sbjct: 117  RPQRGRYRQFHQVGVEALGFAGPDVDAEVILMARSLWRDLGLTDVRLELNSLGQADERRA 176

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y ++H D      + +  L+ N LR+LD+KN  ++ I+  AP+L+D+L + SL
Sbjct: 177  HRAALIAYFEQHLDE--LDAEAQRRLHSNPLRILDTKNPAMQAIVEAAPQLMDFLGEASL 234

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
             H   ++  L+     Y+IN +LVRGMDYYN TVFEW TD+LG+Q +ICGGGRYD LI++
Sbjct: 235  KHLDAVKAQLDAVGQPYRINPRLVRGMDYYNLTVFEWVTDRLGAQGTICGGGRYDGLIEQ 294

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               K  PA G+ +GIER+IEL+K+  +    +   D Y V     A   A   +E LR  
Sbjct: 295  IGGKPAPAVGWGLGIERVIELLKESGVTAPAT-SPDAYAVVPDAAALPIATACAEALRAA 353

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK 1227
            G+ V+++    +   S KSQ K+A+AS A FA + G +E+    + +K LR       L+
Sbjct: 354  GIAVVMHAAGKDGPGSMKSQFKKADASGATFALVFGADELAQGMVAVKPLRAGGGAQVLR 413

Query: 1228 QIS 1230
             I+
Sbjct: 414  PIA 416


>gi|330807651|ref|YP_004352113.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375759|gb|AEA67109.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 490

 Score =  369 bits (946), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 188/444 (42%), Positives = 278/444 (62%), Gaps = 17/444 (3%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
           M PV+ LVGRPNVGKSTLFNRLT +RDA+V +  GLTRDR YGE     +++I++DTGG 
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILVDTGGI 60

Query: 61  EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
             + + G+  +M +Q+  AI E+D+++F+VD + G    D++I   LRK  +   +V NK
Sbjct: 61  SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119

Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
            +NI+  ++  +F  LG+G    I+  +G GI   L+  L    P     +         
Sbjct: 120 VDNIDPDMARAEFAPLGMGQAIPIAGAHGRGITQMLKIALE-SFPKDDVEEPEEGEEEIV 178

Query: 172 ------KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
                 K        + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI   F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238

Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
           E N +KY LIDTAG+R+R K  E +EKFSV+KTL++I +ANVVI ++DA++ +   D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298

Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
             F  E+GR+L++ +NKWD +  ++R  +K  ++++L F+ FA  +FISA+    + +  
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVDFADIHFISALHGTGVGNLY 358

Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
            S+ + + S++    T+R+T+ L  A+  H P      R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGN 418

Query: 406 RLKYIGNDYKRYLEKYFYRTFSLI 429
           +++ +   Y RYLE  + R   L+
Sbjct: 419 QIEKVPKSYVRYLENTYRRVLKLV 442


>gi|385331238|ref|YP_005885189.1| GTP-binding protein EngA [Marinobacter adhaerens HP15]
 gi|311694388|gb|ADP97261.1| GTP-binding protein EngA [Marinobacter adhaerens HP15]
          Length = 452

 Score =  368 bits (945), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 180/408 (44%), Positives = 273/408 (66%), Gaps = 8/408 (1%)

Query: 22  LTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAII 81
           +T SRDALVA++PGLTRDR YGEG    + FI+IDTGG   + ++G+  EM +Q+ QA+ 
Sbjct: 1   MTRSRDALVADFPGLTRDRKYGEGSYEGQRFIVIDTGGLTGD-EQGLDLEMARQSMQAVE 59

Query: 82  ESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL-DFYELGIGNP 140
           E+DI++F+VDGR GL   D+LI + LR+SG+   LV+NK++  +  I+  DFY LG  + 
Sbjct: 60  EADIVLFLVDGRAGLTAGDELIADSLRRSGKQAHLVVNKTDGQDPDIAASDFYSLGFEST 119

Query: 141 HIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLIN 200
            +I+A +  GI++ LE +L  E   ++  +   +  I      ++ +VG+PNVGKSTL+N
Sbjct: 120 FLIAASHNRGIRSMLEILLPSEEEREEEDRADRYPGI------RIGVVGRPNVGKSTLVN 173

Query: 201 SLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLK 260
            +LGE+RV+ YD PGTTRDS+   +E    +Y LIDTAG+RRR    EV+EKFS+IKTL+
Sbjct: 174 RMLGEDRVVVYDMPGTTRDSVYIPYERQGSQYTLIDTAGVRRRKNVSEVVEKFSIIKTLQ 233

Query: 261 SILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKK 320
           +I +A+VVIL++DA++ +  QD+++  F+ ++GRSL++ VNKWD +    R  +K  +++
Sbjct: 234 AIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVIAVNKWDGMDPEDRARVKEQVQR 293

Query: 321 KLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRK 380
           +L+FL +A  ++ISA+  + +    ES+   Y+S++    T+R+T  L  AI  H P   
Sbjct: 294 RLDFLDYADKHYISALHGSGVGVMYESVQACYESAMAKWPTNRLTAILQDAIAQHQPPMV 353

Query: 381 KLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSL 428
              R KLRYAHQGG NPP+IV+HGN++  +   YKRYLE  F +   +
Sbjct: 354 HGRRIKLRYAHQGGSNPPVIVVHGNQVDSLPGAYKRYLENTFRKVLKV 401



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 18/166 (10%)

Query: 7   LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
           +VGRPNVGKSTL NR+      +V + PG TRD  Y         + +IDT G     +K
Sbjct: 160 VVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYERQGSQYTLIDTAGV--RRRK 217

Query: 67  GIMHEMTK----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
            +   + K    +T QAI ++ ++I ++D R+GLV+QD  +  F+  +G+ +V+ +NK +
Sbjct: 218 NVSEVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVIAVNKWD 277

Query: 123 NINSSI----------SLDFYELGIGNPHIISALYGNGIKNFLENI 158
            ++              LDF  L   + H ISAL+G+G+    E++
Sbjct: 278 GMDPEDRARVKEQVQRRLDF--LDYADKHYISALHGSGVGVMYESV 321


>gi|149190089|ref|ZP_01868366.1| histidyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148836119|gb|EDL53079.1| histidyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 422

 Score =  368 bits (945), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 179/373 (47%), Positives = 254/373 (68%), Gaps = 12/373 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TD+V+KEMY+F D  NGD+L+LRPEGTA  +RS IEN L+Y+  +RLWY GPMFRHE
Sbjct: 57   GEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
            RPQ GRYRQF+Q GVE  G  GPD+DAELI+M +RLW+ L + +++ LELNSIG+   R 
Sbjct: 116  RPQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGIAEHVRLELNSIGSLEARA 175

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
             Y   LI ++++H D     ED K  +Y N LRVLDSKN  ++ IL++AP+L DYL+ DS
Sbjct: 176  DYRTALIAHLEQHIDV--LDEDSKRRMYTNPLRVLDSKNPDVQAILVDAPELSDYLDADS 233

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
              HF G+ ++L+   I Y +N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L++
Sbjct: 234  KQHFAGLCELLDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVE 293

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  PA GFA+G+ERL+ +++ + +  +     D Y+V  G+   +    L+E+LR 
Sbjct: 294  QLGGKATPAVGFAMGLERLVLMMETLELT-DVRRSVDAYVVTAGEGTMMAGMKLAESLRE 352

Query: 1167 L--GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDP 1224
               G++V+ +    N    FK Q KRA+   A +A ++GENE+  NT+++KDL+   E  
Sbjct: 353  AIPGIRVMNHFGGGN----FKKQFKRADKVGAVYALVLGENEVAENTVVVKDLQGG-EQE 407

Query: 1225 TLKQISISFKDAE 1237
            T+ Q  ++ K A+
Sbjct: 408  TIAQTELAAKLAD 420


>gi|53802993|ref|YP_115280.1| hypothetical protein MCA2887 [Methylococcus capsulatus str. Bath]
 gi|81680833|sp|Q603C0.1|RLMN_METCA RecName: Full=Dual-specificity RNA methyltransferase RlmN; AltName:
           Full=23S rRNA (adenine(2503)-C(2))-methyltransferase;
           AltName: Full=23S rRNA m2A2503 methyltransferase;
           AltName: Full=Ribosomal RNA large subunit
           methyltransferase N; AltName: Full=tRNA
           (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA
           m2A37 methyltransferase
 gi|53756754|gb|AAU91045.1| conserved hypothetical protein TIGR00048 [Methylococcus capsulatus
           str. Bath]
          Length = 366

 Score =  368 bits (945), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 175/343 (51%), Positives = 236/343 (68%), Gaps = 15/343 (4%)

Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
           LGE PFRA QL +WIH+ GV+DF  MT+LS +LR +L+    I+ P ++ +Q S DGTRK
Sbjct: 31  LGEKPFRASQLLQWIHQRGVTDFGLMTNLSKTLRSRLEAVSEIRPPELVLEQRSADGTRK 90

Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
           W+  V   N +ETV IP++ RNTLC+S+QVGC++ C FCST RQGF RNLT  EIIGQLW
Sbjct: 91  WVLQVDAVNRVETVLIPDEGRNTLCVSSQVGCSLECSFCSTARQGFNRNLTTAEIIGQLW 150

Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
           V + +L  E+          +I+N+V+MGMGEPLLN+ + + A +L++ D AYGLS+R V
Sbjct: 151 VAQHRLDEEQ----------RISNVVLMGMGEPLLNFGNVVAATRLMMDDFAYGLSKRRV 200

Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
            LSTSGI+P +D+LA+   + LAVSLHA ++ LRN+LVPI++KYP++EL+ AC RY+   
Sbjct: 201 TLSTSGIVPALDRLAEVSDISLAVSLHAPDDTLRNELVPINRKYPIRELLAACKRYVGTE 260

Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
            R  +TFEY ML G+ND   HA  L+ L+         K+NLIPFN FPNS   CS    
Sbjct: 261 NRRKVTFEYVMLDGVNDRPEHARALVRLLSH----VPSKVNLIPFNPFPNSAYRCSHPET 316

Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
           I  FA+ L ++G+  T RK RG DI+AACGQL G+  D  +++
Sbjct: 317 IARFAQTLQDAGLITTTRKTRGRDIDAACGQLVGKVNDRSRRQ 359


>gi|383317236|ref|YP_005378078.1| ribosome-associated GTPase EngA [Frateuria aurantia DSM 6220]
 gi|379044340|gb|AFC86396.1| ribosome-associated GTPase EngA [Frateuria aurantia DSM 6220]
          Length = 469

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 184/432 (42%), Positives = 277/432 (64%), Gaps = 10/432 (2%)

Query: 1   MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
           M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG   +   +  ++IDTGG
Sbjct: 1   MLPVIALVGRPNVGKSTLFNVLTRSRDALVADLPGVTRDRHYGVCRLDAARPLMVIDTGG 60

Query: 60  FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
                + G+     +Q + AI ES +++F+VD R GL+ QD+ I + LR+SG+P+++ +N
Sbjct: 61  LSGS-EDGLDGLSARQVRLAIEESQVVVFVVDARDGLLPQDRTIISELRRSGKPLIVGVN 119

Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK--KEFTN 176
           K++ ++  ++  +F   G+     ++A +G G    L ++  + LP   +     +E  +
Sbjct: 120 KTDGLDLDTVMAEFSAFGVAATVPLAAAHGRGSDLLLADVFPL-LPADAYADDGGEEIAD 178

Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
                 I+VAIVG+PN GKSTL+N LLGE+R+I  D  GTTRD IK   E + K++ LID
Sbjct: 179 ----PGIRVAIVGRPNAGKSTLVNRLLGEDRLIVSDVAGTTRDPIKVTLERDGKQFTLID 234

Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
           TAG+RRR+K  + +EKFSVIKTL+SI  A VV++L+DA++N++ QD+ +     E GR+L
Sbjct: 235 TAGVRRRSKVEDAVEKFSVIKTLQSIEAAQVVVMLVDARENLADQDLTLIGHTVEQGRAL 294

Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
           ++ +NKWD +   QR   +  + ++L F+ +A   FISA+  + +   M ++   + ++ 
Sbjct: 295 VIALNKWDGMDAYQRDQCQQALARRLAFVDWAKIVFISALHGSGMRELMRAVVQAHAAAT 354

Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
             L+TS +TRAL  A +++ P   +   PKLR+AH GG NPP IV+HG R K+I   Y+R
Sbjct: 355 KELNTSELTRALEKAYESYQPPLVRGHAPKLRFAHPGGLNPPTIVLHGTRTKHIAPSYRR 414

Query: 417 YLEKYFYRTFSL 428
           YLE +F   F L
Sbjct: 415 YLENFFRARFKL 426


>gi|89072703|ref|ZP_01159268.1| histidyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051523|gb|EAR56977.1| histidyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 422

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 183/372 (49%), Positives = 253/372 (68%), Gaps = 12/372 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TD+V+KEMY+F D  NGD+L+LRPEGTA  +R+ I+N L+Y+  +RLWY GPMFRHE
Sbjct: 57   GEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
            RPQ GRYRQF+Q+GVE  G  GPDIDAELI+M +RLW+ L + +++ LELNSIG+   R 
Sbjct: 116  RPQKGRYRQFHQVGVEVFGLNGPDIDAELIMMTARLWRELGINEHVRLELNSIGSLEARA 175

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
            +Y   LI ++++H D     ED K  +Y N LRVLD+KN  I+EIL +APKL +YL+ +S
Sbjct: 176  EYRKALIAFLEQHLDV--LDEDAKRRMYTNPLRVLDTKNAAIQEILEDAPKLSEYLDLES 233

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
             +HF G+ ++L+   I Y++N +LVRG+DYYNRTVFEW T+ LGSQ ++CGGGRYD L++
Sbjct: 234  KEHFAGLCELLDAAGIKYQVNERLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVE 293

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  P+ GFA+G+ERL+ L+K +          D+Y+V  G+        L+E LRT
Sbjct: 294  QLGGKATPSVGFAMGLERLVLLMKALE-QDEVRRSVDVYMVTAGEGTLAVGMKLAEKLRT 352

Query: 1167 --LGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDP 1224
               GL+V+ N    N    FK Q KRA+   A  A ++GENEI  N++++KDL    E  
Sbjct: 353  EVPGLRVMTNFGGGN----FKKQFKRADNVGAAVALVLGENEIAENSVVVKDLHGG-EQT 407

Query: 1225 TLKQISISFKDA 1236
            T+ Q  ++ K A
Sbjct: 408  TIAQDEVAAKLA 419


>gi|365540819|ref|ZP_09365994.1| histidyl-tRNA synthetase [Vibrio ordalii ATCC 33509]
          Length = 422

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 180/370 (48%), Positives = 253/370 (68%), Gaps = 12/370 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TD+V+KEMYSF D  NGD+LSLRPEGTA  +RS IEN L+Y+  +RLWY GPMFRHE
Sbjct: 57   GEVTDVVEKEMYSFEDR-NGDSLSLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
            RPQ GRYRQF+Q GVE  G  GPD+DAELI+M +RLW+ L + K++ LELNSIG+   R 
Sbjct: 116  RPQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSLEARA 175

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
             Y   LI+Y+++H++     ED K  +Y N LRVLD+KN  I+ IL +APKL +YL+++S
Sbjct: 176  NYRTALIDYLEQHQEV--LDEDAKRRMYTNPLRVLDTKNPDIQAILGDAPKLSEYLDEES 233

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
              HF G+ ++L    I Y++N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L++
Sbjct: 234  KQHFAGLCELLTAAGIEYQVNERLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVE 293

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  PA GFA+G+ERL+ +++ + +  +     D+Y+V  G+   + A  L+E LR 
Sbjct: 294  QLGGKATPAVGFAMGLERLVLMMETLELT-DVRRSVDVYMVSAGEGTMMTAMKLAEQLRE 352

Query: 1167 L--GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDP 1224
               GL+V+ +    N    FK Q KRA+   A  A ++GE+E+  +T+++KDL    E  
Sbjct: 353  QVPGLRVMNHFGGGN----FKKQFKRADKVGAAVALVLGEDEVAESTVVLKDLIGG-EQI 407

Query: 1225 TLKQISISFK 1234
            T+ Q  ++ K
Sbjct: 408  TISQTEVASK 417


>gi|422348555|ref|ZP_16429448.1| histidine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
 gi|404659189|gb|EKB32044.1| histidine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
          Length = 428

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 170/352 (48%), Positives = 246/352 (69%), Gaps = 7/352 (1%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TDIV+KEMYSF D +NGD L+LRPE T++V+RSV E++L+Y   +RLWY GPMFRHE
Sbjct: 58   GEVTDIVEKEMYSFTDSMNGDQLTLRPECTSAVVRSVNEHSLLYGATQRLWYCGPMFRHE 117

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKK 987
            RPQ GRYRQF+Q+G EA+G  GPDIDAE+I+M +R+WK L + ++ LELN++G   ER+ 
Sbjct: 118  RPQRGRYRQFHQLGAEALGMEGPDIDAEMIMMLARIWKELGVGDVRLELNTLGALPERQA 177

Query: 988  YCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSL 1047
            +   LI Y + ++D     ED +  LY N LR+LD+KN  ++E++  AP+LLD+L ++S 
Sbjct: 178  HREALIKYFEGNQDV--LDEDARRRLYTNPLRILDTKNPEMQELVNAAPRLLDFLGEESR 235

Query: 1048 DHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKK 1107
                 ++++++   I Y IN +LVRG+DYYN TVFEW TDKLG+Q +ICGGGRYD LI+ 
Sbjct: 236  AFLARMEQLVSAAGIEYVINPRLVRGLDYYNHTVFEWITDKLGAQGTICGGGRYDPLIEM 295

Query: 1108 FSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL 1167
               +  P  GFA+G+ER+IEL+++         Q D+Y++H G + +++A +L+E LR  
Sbjct: 296  LGGRPAPGVGFAMGMERVIELMRECG-RVPVRTQTDVYVIHSGGDTQVQAMLLAEALRDA 354

Query: 1168 GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRN 1219
            G++V+++         FKSQMK+A+AS A FA    E+E+   T+ +K LR 
Sbjct: 355  GVRVMVHPG----KSGFKSQMKKADASGARFAVFAAEDELAAGTVSVKALRE 402


>gi|336124876|ref|YP_004566924.1| Histidyl-tRNA synthetase [Vibrio anguillarum 775]
 gi|335342599|gb|AEH33882.1| Histidyl-tRNA synthetase [Vibrio anguillarum 775]
          Length = 422

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 180/370 (48%), Positives = 253/370 (68%), Gaps = 12/370 (3%)

Query: 868  GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
            GE TD+V+KEMYSF D  NGD+LSLRPEGTA  +RS IEN L+Y+  +RLWY GPMFRHE
Sbjct: 57   GEVTDVVEKEMYSFEDR-NGDSLSLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHE 115

Query: 928  RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
            RPQ GRYRQF+Q GVE  G  GPD+DAELI+M +RLW+ L + K++ LELNSIG+   R 
Sbjct: 116  RPQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSLEARA 175

Query: 987  KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
             Y   LI+Y+++H++     ED K  +Y N LRVLD+KN  I+ IL +APKL +YL+++S
Sbjct: 176  NYRTALIDYLEQHQEV--LDEDAKRRMYTNPLRVLDTKNPDIQAILGDAPKLSEYLDEES 233

Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
              HF G+ ++L    I Y++N +LVRG+DYYNRTVFEW T+ LG+Q ++CGGGRYD L++
Sbjct: 234  KQHFAGLCELLTAAGIEYQVNERLVRGLDYYNRTVFEWITESLGAQGTVCGGGRYDGLVE 293

Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
            +   K  PA GFA+G+ERL+ +++ + +  +     D+Y+V  G+   + A  L+E LR 
Sbjct: 294  QLGGKATPAVGFAMGLERLVLMMETLKLT-DVRRSVDVYMVSAGEGTMMAAMKLAEQLRE 352

Query: 1167 L--GLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDP 1224
               GL+V+ +    N    FK Q KRA+   A  A ++GE+E+  +T+++KDL    E  
Sbjct: 353  QVPGLRVMNHFGGGN----FKKQFKRADKVGAAVALVLGEDEVAESTVVLKDLIGG-EQI 407

Query: 1225 TLKQISISFK 1234
            T+ Q  ++ K
Sbjct: 408  TISQTEVASK 417


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.139    0.406 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,088,667,649
Number of Sequences: 23463169
Number of extensions: 832884245
Number of successful extensions: 2600601
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 26476
Number of HSP's successfully gapped in prelim test: 15554
Number of HSP's that attempted gapping in prelim test: 2470474
Number of HSP's gapped (non-prelim): 74620
length of query: 1250
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1095
effective length of database: 8,722,404,172
effective search space: 9551032568340
effective search space used: 9551032568340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 83 (36.6 bits)