Your job contains 1 sequence.
>psy17091
MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF
EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK
SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI
EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI
RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV
NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS
TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK
YFYRTFSLIDALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNL
VNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMP
FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHV
KKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTEFKL
RREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVILSTSG
IIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSPRHMIT
FEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRIKIFAK
ILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEMYSFIDELNGDNLSLRPEGTASV
IRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMC
SRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRV
LDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRT
VFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSH
QCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAA
IIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAENYFYKKIIKNINN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17091
(1250 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P0A6P5 - symbol:der "50S ribosomal subunit stab... 620 4.0e-91 2
UNIPROTKB|Q603C0 - symbol:rlmN "Dual-specificity RNA meth... 886 9.6e-89 1
UNIPROTKB|Q9KTW7 - symbol:der "GTPase Der" species:243277... 596 1.3e-88 2
TIGR_CMR|VC_0763 - symbol:VC_0763 "GTP-binding protein" s... 596 1.3e-88 2
UNIPROTKB|Q47WC5 - symbol:der "GTPase Der" species:167879... 595 1.6e-88 2
TIGR_CMR|CPS_4247 - symbol:CPS_4247 "GTP-binding protein ... 595 1.6e-88 2
UNIPROTKB|Q83C83 - symbol:der "GTPase Der" species:227377... 863 2.6e-86 1
TIGR_CMR|CBU_1245 - symbol:CBU_1245 "GTP-binding protein"... 863 2.6e-86 1
UNIPROTKB|Q8EC29 - symbol:rlmN "Dual-specificity RNA meth... 846 1.9e-84 1
TIGR_CMR|SO_3315 - symbol:SO_3315 "conserved hypothetical... 846 1.9e-84 1
UNIPROTKB|Q83C77 - symbol:rlmN "Dual-specificity RNA meth... 844 3.3e-84 1
TIGR_CMR|CBU_1252 - symbol:CBU_1252 "radical SAM enzyme, ... 844 3.3e-84 1
UNIPROTKB|Q9KTX0 - symbol:hisS "Histidine--tRNA ligase" s... 815 7.8e-81 1
TIGR_CMR|VC_0760 - symbol:VC_0760 "histidyl-tRNA syntheta... 815 7.8e-81 1
UNIPROTKB|P36979 - symbol:rlmN "23S rRNA m2A2503 methyltr... 814 1.0e-80 1
UNIPROTKB|P60906 - symbol:hisS "histidyl-tRNA synthetase"... 808 4.8e-80 1
UNIPROTKB|Q47WB7 - symbol:rlmN "Dual-specificity RNA meth... 803 1.7e-79 1
TIGR_CMR|CPS_4255 - symbol:CPS_4255 "radical SAM enzyme, ... 803 1.7e-79 1
UNIPROTKB|Q8EC36 - symbol:der "GTPase Der" species:211586... 802 2.2e-79 1
TIGR_CMR|SO_3308 - symbol:SO_3308 "GTP-binding protein En... 802 2.2e-79 1
UNIPROTKB|Q9KTX3 - symbol:rlmN "Dual-specificity RNA meth... 789 6.3e-78 1
TIGR_CMR|VC_0757 - symbol:VC_0757 "conserved hypothetical... 789 6.3e-78 1
TIGR_CMR|SO_3311 - symbol:SO_3311 "histidyl-tRNA syntheta... 774 2.9e-76 1
TIGR_CMR|CBU_1248 - symbol:CBU_1248 "histidyl-tRNA synthe... 757 2.1e-74 1
UNIPROTKB|Q74AX4 - symbol:der "GTPase Der" species:243231... 709 3.7e-69 1
TIGR_CMR|GSU_2225 - symbol:GSU_2225 "GTP-binding protein ... 709 3.7e-69 1
TIGR_CMR|SPO_3346 - symbol:SPO_3346 "radical SAM enzyme, ... 675 1.8e-65 1
TIGR_CMR|CHY_1919 - symbol:CHY_1919 "GTP-binding protein"... 663 3.5e-64 1
UNIPROTKB|Q3Z6P5 - symbol:der "GTPase Der" species:243164... 642 6.5e-62 1
TIGR_CMR|DET_1395 - symbol:DET_1395 "GTP-binding protein"... 642 6.5e-62 1
DICTYBASE|DDB_G0288255 - symbol:DDB_G0288255 "putative ri... 641 8.3e-62 1
UNIPROTKB|Q81SW9 - symbol:der "GTPase Der" species:1392 "... 622 9.3e-60 1
TIGR_CMR|BA_1525 - symbol:BA_1525 "GTPase family protein"... 622 9.3e-60 1
TIGR_CMR|GSU_1659 - symbol:GSU_1659 "histidyl-tRNA synthe... 606 4.9e-58 1
UNIPROTKB|Q81WH4 - symbol:rlmN "Probable dual-specificity... 594 9.5e-57 1
TIGR_CMR|BA_4002 - symbol:BA_4002 "conserved hypothetical... 594 9.5e-57 1
UNIPROTKB|Q3AC22 - symbol:rlmN "Probable dual-specificity... 592 1.6e-56 1
TIGR_CMR|CHY_1480 - symbol:CHY_1480 "radical SAM enzyme, ... 592 1.6e-56 1
UNIPROTKB|Q74E53 - symbol:rlmN "Dual-specificity RNA meth... 586 6.9e-56 1
TIGR_CMR|BA_4633 - symbol:BA_4633 "histidyl-tRNA syntheta... 586 6.9e-56 1
TIGR_CMR|GSU_1111 - symbol:GSU_1111 "conserved hypothetic... 586 6.9e-56 1
TIGR_CMR|CHY_2205 - symbol:CHY_2205 "histidyl-tRNA synthe... 579 3.9e-55 1
UNIPROTKB|Q2GGW4 - symbol:engA "GTPase Der" species:20592... 562 2.6e-53 1
TIGR_CMR|ECH_0504 - symbol:ECH_0504 "GTP-binding protein ... 562 2.6e-53 1
TIGR_CMR|ECH_0291 - symbol:ECH_0291 "histidyl-tRNA synthe... 559 5.5e-53 1
UNIPROTKB|P67483 - symbol:hisS "Histidine--tRNA ligase" s... 557 9.0e-53 1
TIGR_CMR|DET_0006 - symbol:DET_0006 "histidyl-tRNA synthe... 550 5.1e-52 1
UNIPROTKB|P64057 - symbol:der "GTPase Der" species:1773 "... 527 1.5e-49 1
TIGR_CMR|CJE_0856 - symbol:CJE_0856 "histidyl-tRNA synthe... 526 1.9e-49 1
TIGR_CMR|NSE_0781 - symbol:NSE_0781 "histidyl-tRNA synthe... 525 2.4e-49 1
UNIPROTKB|Q2GKV6 - symbol:der "GTPase Der" species:212042... 516 2.2e-48 1
TIGR_CMR|APH_0390 - symbol:APH_0390 "putative GTP-binding... 516 2.2e-48 1
TIGR_CMR|APH_0120 - symbol:APH_0120 "histidyl-tRNA synthe... 516 2.2e-48 1
UNIPROTKB|Q5LR04 - symbol:der "GTPase Der" species:246200... 325 9.4e-48 2
TIGR_CMR|SPO_2328 - symbol:SPO_2328 "GTP-binding protein ... 325 9.4e-48 2
UNIPROTKB|Q723G9 - symbol:rlmN "Probable dual-specificity... 502 7.1e-47 1
TAIR|locus:2195608 - symbol:AT1G60230 species:3702 "Arabi... 496 3.1e-46 1
TIGR_CMR|CJE_1882 - symbol:CJE_1882 "radical SAM enzyme, ... 494 5.1e-46 1
TAIR|locus:2043225 - symbol:AT2G39670 species:3702 "Arabi... 481 1.3e-44 1
UNIPROTKB|P0A644 - symbol:rlmN "Probable dual-specificity... 464 8.3e-43 1
DICTYBASE|DDB_G0279259 - symbol:DDB_G0279259 "putative GT... 491 1.0e-42 2
TIGR_CMR|CJE_0435 - symbol:CJE_0435 "GTPase family protei... 447 5.5e-41 1
TAIR|locus:2099277 - symbol:emb2738 "embryo defective 273... 335 6.7e-41 2
GENEDB_PFALCIPARUM|PFL0835w - symbol:PFL0835w "GTP-bindin... 348 1.6e-39 2
UNIPROTKB|Q8I5N5 - symbol:PFL0835w "GTP binding protein, ... 348 1.6e-39 2
UNIPROTKB|Q2GDM7 - symbol:NSE_0536 "GTPase Der" species:2... 391 3.9e-36 2
TIGR_CMR|NSE_0536 - symbol:NSE_0536 "putative GTP-binding... 391 3.9e-36 2
DICTYBASE|DDB_G0269822 - symbol:mhisS "putative mitochond... 378 1.3e-33 1
GENEDB_PFALCIPARUM|PF14_0066 - symbol:PF14_0066 "radical ... 377 1.7e-33 1
UNIPROTKB|Q8IM25 - symbol:PF14_0066 "Radical SAM protein,... 377 1.7e-33 1
TIGR_CMR|CBU_1258 - symbol:CBU_1258 "nucleoside diphospha... 353 6.1e-31 1
UNIPROTKB|O83107 - symbol:rlmN "Probable dual-specificity... 338 2.5e-29 1
TAIR|locus:2091161 - symbol:AT3G19630 species:3702 "Arabi... 328 2.9e-28 1
TIGR_CMR|CPS_4256 - symbol:CPS_4256 "nucleoside diphospha... 323 9.8e-28 1
TIGR_CMR|SO_2274 - symbol:SO_2274 "nucleoside diphosphate... 323 9.8e-28 1
TIGR_CMR|CJE_0377 - symbol:CJE_0377 "nucleoside diphospha... 321 1.6e-27 1
TIGR_CMR|APH_1217 - symbol:APH_1217 "nucleoside diphospha... 307 5.0e-26 1
UNIPROTKB|Q9KTX4 - symbol:ndk "Nucleoside diphosphate kin... 304 1.0e-25 1
TIGR_CMR|VC_0756 - symbol:VC_0756 "nucleoside diphosphate... 304 1.0e-25 1
TIGR_CMR|NSE_0560 - symbol:NSE_0560 "nucleoside diphospha... 303 1.3e-25 1
TIGR_CMR|ECH_1117 - symbol:ECH_1117 "nucleoside diphospha... 288 5.3e-24 1
UNIPROTKB|P0A763 - symbol:ndk "Ndk" species:83333 "Escher... 280 3.8e-23 1
TIGR_CMR|SPO_2444 - symbol:SPO_2444 "nucleoside diphospha... 275 1.3e-22 1
TIGR_CMR|GSU_1110 - symbol:GSU_1110 "nucleoside diphospha... 256 1.4e-20 1
TIGR_CMR|DET_0394 - symbol:DET_0394 "nucleoside diphospha... 249 7.7e-20 1
ZFIN|ZDB-GENE-030131-7656 - symbol:nme2a "non-metastatic ... 246 1.6e-19 1
TIGR_CMR|CHY_0215 - symbol:CHY_0215 "nucleoside diphospha... 245 2.1e-19 1
UNIPROTKB|F6PVJ7 - symbol:NME1 "Nucleoside diphosphate ki... 242 4.3e-19 1
UNIPROTKB|P52174 - symbol:NME1-1 "Nucleoside diphosphate ... 241 5.5e-19 1
SGD|S000001550 - symbol:YNK1 "Nucleoside diphosphate kina... 240 7.0e-19 1
ASPGD|ASPL0000017184 - symbol:swoH species:162425 "Emeric... 239 9.0e-19 1
UNIPROTKB|P15531 - symbol:NME1 "Nucleoside diphosphate ki... 238 1.1e-18 1
UNIPROTKB|Q32Q12 - symbol:NME1-NME2 "Nucleoside diphospha... 237 1.5e-18 1
UNIPROTKB|P22392 - symbol:NME2 "Nucleoside diphosphate ki... 237 1.5e-18 1
MGI|MGI:97356 - symbol:Nme2 "NME/NM23 nucleoside diphosph... 237 1.5e-18 1
UNIPROTKB|Q50KA9 - symbol:NME1 "Nucleoside diphosphate ki... 236 1.9e-18 1
ZFIN|ZDB-GENE-040426-1043 - symbol:nme4 "non-metastatic c... 236 1.9e-18 1
RGD|619877 - symbol:Nme2 "NME/NM23 nucleoside diphosphate... 235 2.4e-18 1
DICTYBASE|DDB_G0273805 - symbol:ndkC-2 "NDP kinase" speci... 234 3.1e-18 1
DICTYBASE|DDB_G0273069 - symbol:ndkC-1 "NDP kinase" speci... 234 3.1e-18 1
WARNING: Descriptions of 185 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|P0A6P5 [details] [associations]
symbol:der "50S ribosomal subunit stability factor"
species:83333 "Escherichia coli K-12" [GO:0005829 "cytosol"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0043022 GO:GO:0000027
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 PIR:F65027 RefSeq:NP_417006.2
RefSeq:YP_490739.1 ProteinModelPortal:P0A6P5 SMR:P0A6P5
DIP:DIP-48272N IntAct:P0A6P5 PaxDb:P0A6P5 PRIDE:P0A6P5
EnsemblBacteria:EBESCT00000000698 EnsemblBacteria:EBESCT00000017218
GeneID:12934159 GeneID:946983 KEGG:ecj:Y75_p2464 KEGG:eco:b2511
PATRIC:32120415 EchoBASE:EB3959 EcoGene:EG14207
BioCyc:EcoCyc:G7319-MONOMER BioCyc:ECOL316407:JW5403-MONOMER
BioCyc:MetaCyc:G7319-MONOMER Genevestigator:P0A6P5 Uniprot:P0A6P5
Length = 490
Score = 620 (223.3 bits), Expect = 4.0e-91, Sum P(2) = 4.0e-91
Identities = 119/247 (48%), Positives = 168/247 (68%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRDSI E + ++Y+LIDTAG+R+
Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRK 262
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
R K + +EKFSVIKTL++I +ANVV+L++DA++ IS QD+++ FI SGRSL++ VNK
Sbjct: 263 RGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNK 322
Query: 303 WDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTS 362
WD F+ FA +FISA+ + + + ES+ YDSS + TS
Sbjct: 323 WDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTS 382
Query: 363 RITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYF 422
+TR + A+++H P + R KL+YAH GG NPPI+VIHGN++K + + YKRYL YF
Sbjct: 383 MLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYF 442
Query: 423 YRTFSLI 429
++ ++
Sbjct: 443 RKSLDVM 449
Score = 327 (120.2 bits), Expect = 4.0e-91, Sum P(2) = 4.0e-91
Identities = 75/174 (43%), Positives = 100/174 (57%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ + G+ M +Q+ A VD R GL+ D+ I LR +P LV
Sbjct: 61 DG-TEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 XXXXX-XXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE 173
+DFY LG+G + I+A +G G+ + LE++L LP+ + +E
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQE 170
Score = 194 (73.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 53/168 (31%), Positives = 80/168 (47%)
Query: 3 PV-LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
P+ L +VGRPNVGKSTL NR+ +V + PG TRD Y + +++IDT G
Sbjct: 202 PIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVR 261
Query: 62 P--EVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVX- 118
++ + +T QA +D R+G+ +QD + F+ SG+ +V+V
Sbjct: 262 KRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVN 321
Query: 119 -----XXXXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LDF LG H ISAL+G+G+ N E++
Sbjct: 322 KWDGLSQEVKEQVKETLDF-RLGFIDFARVHFISALHGSGVGNLFESV 368
Score = 171 (65.3 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 43/120 (35%), Positives = 64/120 (53%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD E +++I IDT GI +
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI---D 61
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
T + +E ++L +I EA+VV+ ++DA+ + D IA + + + NK D
Sbjct: 62 GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTD 121
>UNIPROTKB|Q603C0 [details] [associations]
symbol:rlmN "Dual-specificity RNA methyltransferase RlmN"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 GO:GO:0008033 EMBL:AE017282
GenomeReviews:AE017282_GR GO:GO:0001510 eggNOG:COG0820 KO:K06941
OMA:MACDFCA GO:GO:0070040 TIGRFAMs:TIGR00048 HOGENOM:HOG000217992
RefSeq:YP_115280.1 ProteinModelPortal:Q603C0 GeneID:3104120
KEGG:mca:MCA2887 PATRIC:22609656 Uniprot:Q603C0
Length = 366
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 175/343 (51%), Positives = 236/343 (68%)
Query: 536 LGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRK 595
LGE PFRA QL +WIH+ GV+DF MT+LS +LR +L+ I+ P ++ +Q S DGTRK
Sbjct: 31 LGEKPFRASQLLQWIHQRGVTDFGLMTNLSKTLRSRLEAVSEIRPPELVLEQRSADGTRK 90
Query: 596 WIFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
W+ V N +ETV IP++ RNTLC+S+QVGC++ C FCST RQGF RNLT EIIGQLW
Sbjct: 91 WVLQVDAVNRVETVLIPDEGRNTLCVSSQVGCSLECSFCSTARQGFNRNLTTAEIIGQLW 150
Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
V + +L E+ +I+N+V+MGMGEPLLN+ + + A +L++ D AYGLS+R V
Sbjct: 151 VAQHRLDEEQ----------RISNVVLMGMGEPLLNFGNVVAATRLMMDDFAYGLSKRRV 200
Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
LSTSGI+P +D+LA+ + LAVSLHA ++ LRN+LVPI++KYP++EL+ AC RY+
Sbjct: 201 TLSTSGIVPALDRLAEVSDISLAVSLHAPDDTLRNELVPINRKYPIRELLAACKRYVGTE 260
Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
R +TFEY ML G+ND HA L+ L+ K+NLIPFN FPNS CS
Sbjct: 261 NRRKVTFEYVMLDGVNDRPEHARALVRLLSH----VPSKVNLIPFNPFPNSAYRCSHPET 316
Query: 835 IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
I FA+ L ++G+ T RK RG DI+AACGQL G+ D +++
Sbjct: 317 IARFAQTLQDAGLITTTRKTRGRDIDAACGQLVGKVNDRSRRQ 359
>UNIPROTKB|Q9KTW7 [details] [associations]
symbol:der "GTPase Der" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 596 (214.9 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 116/268 (43%), Positives = 171/268 (63%)
Query: 162 ELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
+L Y + + E+ + + IK+AI+G+PNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 186 QLEYSEEEAEAEYKRLQDLP-IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSI 244
Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
+ + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++DA++NIS Q
Sbjct: 245 YIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQ 304
Query: 282 DINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNI 341
D+++ F SGRS+++ VNKWD F+ FA +FISA+ +
Sbjct: 305 DLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGV 364
Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
ES+ Y S+ + TS +TR + A +H P + R KL+YAH GG NPPIIV
Sbjct: 365 GHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNPPIIV 424
Query: 402 IHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
IHGN++ + + YKRYL Y+ ++ ++
Sbjct: 425 IHGNQVNELPDSYKRYLMNYYRKSLEIM 452
Score = 328 (120.5 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 68/160 (42%), Positives = 98/160 (61%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ ++G+ +M +Q+ A VDGR GL D+ I LR+ +P +LV
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 XXXXXX-XXXLDFYELGIGNPHIISALYGNGIKNFLENIL 159
+F++LG+ + I+A +G G+ ++ +L
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVL 159
Score = 171 (65.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 50/168 (29%), Positives = 76/168 (45%)
Query: 3 PV-LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
P+ L ++GRPNVGKSTL NR+ +V + PG TRD Y ++ +++IDT G
Sbjct: 205 PIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVR 264
Query: 62 --PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVX- 118
+ + + +T QA VD R+ + +QD + F SG+ IV+
Sbjct: 265 RRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVN 324
Query: 119 -----XXXXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LD LG H ISAL+G G+ + E++
Sbjct: 325 KWDGLSFDVKEHVKKELD-RRLGFVDFARIHFISALHGTGVGHLFESV 371
Score = 170 (64.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD + ++I+IDT GI +
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI---D 61
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ E +E ++L +I EA+VV+ ++D + ++ D IA + + I+ VNK D
Sbjct: 62 GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVD 121
Score = 45 (20.9 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1215 KDLRNKYEDPTLKQISISFKDAENYFYKKI 1244
+DL N+ EDP +Q+ S ++AE YK++
Sbjct: 174 EDLTNE-EDPEEEQLEYSEEEAEAE-YKRL 201
Score = 38 (18.4 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 387 LRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIY 441
L +A G++ IVI N+ + D K +++K R +D + + ++
Sbjct: 309 LGFALNSGRS---IVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALH 360
>TIGR_CMR|VC_0763 [details] [associations]
symbol:VC_0763 "GTP-binding protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 596 (214.9 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 116/268 (43%), Positives = 171/268 (63%)
Query: 162 ELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
+L Y + + E+ + + IK+AI+G+PNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 186 QLEYSEEEAEAEYKRLQDLP-IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSI 244
Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
+ + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++DA++NIS Q
Sbjct: 245 YIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQ 304
Query: 282 DINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNI 341
D+++ F SGRS+++ VNKWD F+ FA +FISA+ +
Sbjct: 305 DLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGV 364
Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
ES+ Y S+ + TS +TR + A +H P + R KL+YAH GG NPPIIV
Sbjct: 365 GHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNPPIIV 424
Query: 402 IHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
IHGN++ + + YKRYL Y+ ++ ++
Sbjct: 425 IHGNQVNELPDSYKRYLMNYYRKSLEIM 452
Score = 328 (120.5 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 68/160 (42%), Positives = 98/160 (61%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ ++G+ +M +Q+ A VDGR GL D+ I LR+ +P +LV
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 XXXXXX-XXXLDFYELGIGNPHIISALYGNGIKNFLENIL 159
+F++LG+ + I+A +G G+ ++ +L
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVL 159
Score = 171 (65.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 50/168 (29%), Positives = 76/168 (45%)
Query: 3 PV-LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
P+ L ++GRPNVGKSTL NR+ +V + PG TRD Y ++ +++IDT G
Sbjct: 205 PIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVR 264
Query: 62 --PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVX- 118
+ + + +T QA VD R+ + +QD + F SG+ IV+
Sbjct: 265 RRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVN 324
Query: 119 -----XXXXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LD LG H ISAL+G G+ + E++
Sbjct: 325 KWDGLSFDVKEHVKKELD-RRLGFVDFARIHFISALHGTGVGHLFESV 371
Score = 170 (64.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD + ++I+IDT GI +
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI---D 61
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ E +E ++L +I EA+VV+ ++D + ++ D IA + + I+ VNK D
Sbjct: 62 GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVD 121
Score = 45 (20.9 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1215 KDLRNKYEDPTLKQISISFKDAENYFYKKI 1244
+DL N+ EDP +Q+ S ++AE YK++
Sbjct: 174 EDLTNE-EDPEEEQLEYSEEEAEAE-YKRL 201
Score = 38 (18.4 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 387 LRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIY 441
L +A G++ IVI N+ + D K +++K R +D + + ++
Sbjct: 309 LGFALNSGRS---IVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALH 360
>UNIPROTKB|Q47WC5 [details] [associations]
symbol:der "GTPase Der" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 595 (214.5 bits), Expect = 1.6e-88, Sum P(2) = 1.6e-88
Identities = 120/269 (44%), Positives = 170/269 (63%)
Query: 161 IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+EL ++ KK E + IK+AI+G+PNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 192 VELTEEELAKKLE-DEPQENDKIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS 250
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
+ E N ++Y LIDTAGIRRR +V+EK+SVIKTL++I +ANV +L++DAQ+ IS
Sbjct: 251 VYIPMERNGREYTLIDTAGIRRRKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISD 310
Query: 281 QDINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNN 340
QD+++ FI E+GRSL++ VNKWD F+ FA +FISA+
Sbjct: 311 QDLSLLGFILEAGRSLVLAVNKWDGLEDHEKDRIKTELDRRLGFIDFARVHFISALHGTG 370
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ES+ + S+ +ST+ +T+ L A+ +H P + R KL+YAH GG NPPII
Sbjct: 371 VGHLYESVEEAFVSATKRISTAMVTKILDMAVFDHQPPLHQGRRIKLKYAHAGGYNPPII 430
Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
+IHGN K + YKRYL Y+ ++ ++
Sbjct: 431 IIHGNSAKKLPMSYKRYLMNYYRKSLKMM 459
Score = 328 (120.5 bits), Expect = 1.6e-88, Sum P(2) = 1.6e-88
Identities = 74/162 (45%), Positives = 96/162 (59%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA+YPGLTRDR YG+ + + FI+IDTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ ++GI +M +Q+ A VD R GL D I + LRK + I +V
Sbjct: 61 NGD-EQGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIFVVANK 119
Query: 121 XXXXXXXXXL-DFYELGIG-NPHIISALYGNGIKNFLENILT 160
+ +FY LG+G + H I+A +G G+ L LT
Sbjct: 120 IDGIHGDSAVAEFYSLGLGEHVHQIAAAHGRGVTQLLTIALT 161
Score = 187 (70.9 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 45/120 (37%), Positives = 67/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD E +I+IDT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGINGDE 64
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ +V K + ++L +I EA+ V+ L+DA+ ++A D IA+ + + + + V NK D
Sbjct: 65 QGIDV--KMAE-QSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIFVVANKID 121
Score = 161 (61.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 48/167 (28%), Positives = 77/167 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
L ++GRPNVGKSTL NR+ +V + PG TRD Y + + +IDT G
Sbjct: 215 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGIRR-- 272
Query: 65 KKGIMHEMTK----QTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+K + + K +T +A +D ++G+ +QD + F+ ++G+ +VL
Sbjct: 273 RKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISDQDLSLLGFILEAGRSLVLAVNK 332
Query: 121 ------XXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LD LG H ISAL+G G+ + E++
Sbjct: 333 WDGLEDHEKDRIKTELD-RRLGFIDFARVHFISALHGTGVGHLYESV 378
>TIGR_CMR|CPS_4247 [details] [associations]
symbol:CPS_4247 "GTP-binding protein EngA" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 595 (214.5 bits), Expect = 1.6e-88, Sum P(2) = 1.6e-88
Identities = 120/269 (44%), Positives = 170/269 (63%)
Query: 161 IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+EL ++ KK E + IK+AI+G+PNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 192 VELTEEELAKKLE-DEPQENDKIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS 250
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
+ E N ++Y LIDTAGIRRR +V+EK+SVIKTL++I +ANV +L++DAQ+ IS
Sbjct: 251 VYIPMERNGREYTLIDTAGIRRRKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISD 310
Query: 281 QDINIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNN 340
QD+++ FI E+GRSL++ VNKWD F+ FA +FISA+
Sbjct: 311 QDLSLLGFILEAGRSLVLAVNKWDGLEDHEKDRIKTELDRRLGFIDFARVHFISALHGTG 370
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ES+ + S+ +ST+ +T+ L A+ +H P + R KL+YAH GG NPPII
Sbjct: 371 VGHLYESVEEAFVSATKRISTAMVTKILDMAVFDHQPPLHQGRRIKLKYAHAGGYNPPII 430
Query: 401 VIHGNRLKYIGNDYKRYLEKYFYRTFSLI 429
+IHGN K + YKRYL Y+ ++ ++
Sbjct: 431 IIHGNSAKKLPMSYKRYLMNYYRKSLKMM 459
Score = 328 (120.5 bits), Expect = 1.6e-88, Sum P(2) = 1.6e-88
Identities = 74/162 (45%), Positives = 96/162 (59%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA+YPGLTRDR YG+ + + FI+IDTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+ ++GI +M +Q+ A VD R GL D I + LRK + I +V
Sbjct: 61 NGD-EQGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIFVVANK 119
Query: 121 XXXXXXXXXL-DFYELGIG-NPHIISALYGNGIKNFLENILT 160
+ +FY LG+G + H I+A +G G+ L LT
Sbjct: 120 IDGIHGDSAVAEFYSLGLGEHVHQIAAAHGRGVTQLLTIALT 161
Score = 187 (70.9 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 45/120 (37%), Positives = 67/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VA+VG+PNVGKSTL N L + D PG TRD E +I+IDT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGINGDE 64
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ +V K + ++L +I EA+ V+ L+DA+ ++A D IA+ + + + + V NK D
Sbjct: 65 QGIDV--KMAE-QSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIFVVANKID 121
Score = 161 (61.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 48/167 (28%), Positives = 77/167 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
L ++GRPNVGKSTL NR+ +V + PG TRD Y + + +IDT G
Sbjct: 215 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGIRR-- 272
Query: 65 KKGIMHEMTK----QTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
+K + + K +T +A +D ++G+ +QD + F+ ++G+ +VL
Sbjct: 273 RKNVTDVVEKYSVIKTLRAIEDANVCLLIIDAQEGISDQDLSLLGFILEAGRSLVLAVNK 332
Query: 121 ------XXXXXXXXXLDFYELGI---GNPHIISALYGNGIKNFLENI 158
LD LG H ISAL+G G+ + E++
Sbjct: 333 WDGLEDHEKDRIKTELD-RRLGFIDFARVHFISALHGTGVGHLYESV 378
>UNIPROTKB|Q83C83 [details] [associations]
symbol:der "GTPase Der" species:227377 "Coxiella burnetii
RSA 493" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 191/430 (44%), Positives = 252/430 (58%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFN LT SR ALVA+ PG+TRDR YGE I + +++DTGG
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL-VXX 119
K + Q +QA VD + GLV D++I LRK G+ I L V
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNK 120
Query: 120 XXXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
DFY+LG G P++I+A G G+K+ + +L LP +K +KE
Sbjct: 121 ADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLE-NLPEEKEVIEKEVG---- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+A++G+PNVGKSTLIN LLGE RVI YD PGTTRDSI F N++ Y LIDTAG
Sbjct: 176 ---IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K + +EKFS+IK+L+++ A+VVI LLDA+Q ++ QD+ + N I E+G SLI+
Sbjct: 233 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIA 292
Query: 300 VNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD F+ FA FISA+ + +I Y S L
Sbjct: 293 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T ++TRAL A+ H P K R +LRYAH G ++P IV+HG + K + Y RYL
Sbjct: 353 TTGQLTRALEKAVAEHEPPLVKGRRIRLRYAHLGARHPLTIVVHGKQTKSLPQSYSRYLA 412
Query: 420 KYFYRTFSLI 429
YF +TF+ I
Sbjct: 413 NYFRKTFNFI 422
>TIGR_CMR|CBU_1245 [details] [associations]
symbol:CBU_1245 "GTP-binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 191/430 (44%), Positives = 252/430 (58%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFN LT SR ALVA+ PG+TRDR YGE I + +++DTGG
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL-VXX 119
K + Q +QA VD + GLV D++I LRK G+ I L V
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNK 120
Query: 120 XXXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
DFY+LG G P++I+A G G+K+ + +L LP +K +KE
Sbjct: 121 ADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLE-NLPEEKEVIEKEVG---- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+A++G+PNVGKSTLIN LLGE RVI YD PGTTRDSI F N++ Y LIDTAG
Sbjct: 176 ---IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K + +EKFS+IK+L+++ A+VVI LLDA+Q ++ QD+ + N I E+G SLI+
Sbjct: 233 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIA 292
Query: 300 VNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD F+ FA FISA+ + +I Y S L
Sbjct: 293 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T ++TRAL A+ H P K R +LRYAH G ++P IV+HG + K + Y RYL
Sbjct: 353 TTGQLTRALEKAVAEHEPPLVKGRRIRLRYAHLGARHPLTIVVHGKQTKSLPQSYSRYLA 412
Query: 420 KYFYRTFSLI 429
YF +TF+ I
Sbjct: 413 NYFRKTFNFI 422
>UNIPROTKB|Q8EC29 [details] [associations]
symbol:rlmN "Dual-specificity RNA methyltransferase RlmN"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 GO:GO:0070040
TIGRFAMs:TIGR00048 HOGENOM:HOG000217992 ProtClustDB:PRK11194
OMA:IYHFGVS RefSeq:NP_718869.1 ProteinModelPortal:Q8EC29
GeneID:1171000 KEGG:son:SO_3315 PATRIC:23526306 Uniprot:Q8EC29
Length = 373
Score = 846 (302.9 bits), Expect = 1.9e-84, P = 1.9e-84
Identities = 179/345 (51%), Positives = 229/345 (66%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
+LGE PFRA QL KWI+ FGVSDF +MT+++ LR+KL I AP I Q S DGT
Sbjct: 22 DLGEKPFRADQLMKWIYHFGVSDFEEMTNINKVLRQKLAARCEIVAPEISGYQKSADGTI 81
Query: 595 KWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
K+ HV + +ETV+IPE +R TLC+S+QVGCA+ C FCST +QGF RNLTV EI+GQ+
Sbjct: 82 KFAIHVGEGQEVETVYIPEDDRATLCVSSQVGCALECTFCSTAQQGFNRNLTVSEIVGQI 141
Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
W L K G+R ITN+VMMGMGEPLLN + I A+ ++L D + LS+R
Sbjct: 142 WRVSHFLGFAKET-----GERPITNVVMMGMGEPLLNLANVIPAMDIMLDDFGFSLSKRR 196
Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
V LSTSG++P +DKL V LAVS+HA N+ LR+ LVP++KKYPL+E + RYI
Sbjct: 197 VTLSTSGVVPALDKLGDALDVALAVSIHAPNDELRDILVPVNKKYPLQEFLAGIRRYIAK 256
Query: 774 SP--RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSK 831
S R +T EY ML IND+ A EL LM+ T CK+NLIPFN +P S S
Sbjct: 257 SNANRGRVTVEYVMLDHINDSTEQAHELAQLMKD----TPCKVNLIPFNPYPGSPYGRSS 312
Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
NSRI F+K+LM G+ V +RK RG+DI+AACGQL+G+ D K+
Sbjct: 313 NSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGDIRDRTKR 357
>TIGR_CMR|SO_3315 [details] [associations]
symbol:SO_3315 "conserved hypothetical protein TIGR00048"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 GO:GO:0070040
TIGRFAMs:TIGR00048 HOGENOM:HOG000217992 ProtClustDB:PRK11194
OMA:IYHFGVS RefSeq:NP_718869.1 ProteinModelPortal:Q8EC29
GeneID:1171000 KEGG:son:SO_3315 PATRIC:23526306 Uniprot:Q8EC29
Length = 373
Score = 846 (302.9 bits), Expect = 1.9e-84, P = 1.9e-84
Identities = 179/345 (51%), Positives = 229/345 (66%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
+LGE PFRA QL KWI+ FGVSDF +MT+++ LR+KL I AP I Q S DGT
Sbjct: 22 DLGEKPFRADQLMKWIYHFGVSDFEEMTNINKVLRQKLAARCEIVAPEISGYQKSADGTI 81
Query: 595 KWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
K+ HV + +ETV+IPE +R TLC+S+QVGCA+ C FCST +QGF RNLTV EI+GQ+
Sbjct: 82 KFAIHVGEGQEVETVYIPEDDRATLCVSSQVGCALECTFCSTAQQGFNRNLTVSEIVGQI 141
Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
W L K G+R ITN+VMMGMGEPLLN + I A+ ++L D + LS+R
Sbjct: 142 WRVSHFLGFAKET-----GERPITNVVMMGMGEPLLNLANVIPAMDIMLDDFGFSLSKRR 196
Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
V LSTSG++P +DKL V LAVS+HA N+ LR+ LVP++KKYPL+E + RYI
Sbjct: 197 VTLSTSGVVPALDKLGDALDVALAVSIHAPNDELRDILVPVNKKYPLQEFLAGIRRYIAK 256
Query: 774 SP--RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSK 831
S R +T EY ML IND+ A EL LM+ T CK+NLIPFN +P S S
Sbjct: 257 SNANRGRVTVEYVMLDHINDSTEQAHELAQLMKD----TPCKVNLIPFNPYPGSPYGRSS 312
Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
NSRI F+K+LM G+ V +RK RG+DI+AACGQL+G+ D K+
Sbjct: 313 NSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGDIRDRTKR 357
>UNIPROTKB|Q83C77 [details] [associations]
symbol:rlmN "Dual-specificity RNA methyltransferase RlmN"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 OMA:MACDFCA
GO:GO:0070040 TIGRFAMs:TIGR00048 HOGENOM:HOG000217992
RefSeq:NP_820246.1 ProteinModelPortal:Q83C77 GeneID:1209157
KEGG:cbu:CBU_1252 PATRIC:17931237 ProtClustDB:CLSK914643
BioCyc:CBUR227377:GJ7S-1238-MONOMER Uniprot:Q83C77
Length = 370
Score = 844 (302.2 bits), Expect = 3.3e-84, P = 3.3e-84
Identities = 165/337 (48%), Positives = 229/337 (67%)
Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
G+ +RA QL +WIH+ GV+DF+ MTDLS R++L + +++ P + +++S DGT KW
Sbjct: 23 GQPLYRATQLLQWIHQRGVTDFSLMTDLSKPFRQQLSEASFVRVPELALERVSADGTHKW 82
Query: 597 IFHVK-KNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
+F + N IETVFIP++ R TLC+S+QVGCA+NC FC+TG++GF RNLT+ EIIGQ+W+
Sbjct: 83 LFRLADNNKIETVFIPDRKRGTLCVSSQVGCALNCSFCATGKEGFNRNLTLAEIIGQVWL 142
Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
L+ +ITN+VMMGMGEPLLNY++ + A+ L++ DHAYGLS+ V
Sbjct: 143 AARLLK----------SPYKITNVVMMGMGEPLLNYEAVVAAMHLMMHDHAYGLSKYRVT 192
Query: 716 LSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSP 775
LSTSG+IP + +L +E PV LAVSLHA N+ LRN L+P++KKY L +LI C Y +
Sbjct: 193 LSTSGVIPAMRRLREESPVSLAVSLHAPNDALRNVLIPLNKKYSLDQLIPLCRDYYSRGS 252
Query: 776 RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRI 835
+ +TFEY M+ G+ND I A +LI L+ CKINLIPFN F + CS S I
Sbjct: 253 KRCVTFEYVMIEGMNDRLIDAKQLIRLLAD----VPCKINLIPFNSFQGTAYRCSTESAI 308
Query: 836 KIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
+F K LM++G +R+ RG+DI ACGQL+G+ D
Sbjct: 309 SVFQKCLMDAGFNTRVRRTRGDDIAGACGQLAGQFHD 345
>TIGR_CMR|CBU_1252 [details] [associations]
symbol:CBU_1252 "radical SAM enzyme, Cfr family"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 OMA:MACDFCA
GO:GO:0070040 TIGRFAMs:TIGR00048 HOGENOM:HOG000217992
RefSeq:NP_820246.1 ProteinModelPortal:Q83C77 GeneID:1209157
KEGG:cbu:CBU_1252 PATRIC:17931237 ProtClustDB:CLSK914643
BioCyc:CBUR227377:GJ7S-1238-MONOMER Uniprot:Q83C77
Length = 370
Score = 844 (302.2 bits), Expect = 3.3e-84, P = 3.3e-84
Identities = 165/337 (48%), Positives = 229/337 (67%)
Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
G+ +RA QL +WIH+ GV+DF+ MTDLS R++L + +++ P + +++S DGT KW
Sbjct: 23 GQPLYRATQLLQWIHQRGVTDFSLMTDLSKPFRQQLSEASFVRVPELALERVSADGTHKW 82
Query: 597 IFHVK-KNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
+F + N IETVFIP++ R TLC+S+QVGCA+NC FC+TG++GF RNLT+ EIIGQ+W+
Sbjct: 83 LFRLADNNKIETVFIPDRKRGTLCVSSQVGCALNCSFCATGKEGFNRNLTLAEIIGQVWL 142
Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
L+ +ITN+VMMGMGEPLLNY++ + A+ L++ DHAYGLS+ V
Sbjct: 143 AARLLK----------SPYKITNVVMMGMGEPLLNYEAVVAAMHLMMHDHAYGLSKYRVT 192
Query: 716 LSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSP 775
LSTSG+IP + +L +E PV LAVSLHA N+ LRN L+P++KKY L +LI C Y +
Sbjct: 193 LSTSGVIPAMRRLREESPVSLAVSLHAPNDALRNVLIPLNKKYSLDQLIPLCRDYYSRGS 252
Query: 776 RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRI 835
+ +TFEY M+ G+ND I A +LI L+ CKINLIPFN F + CS S I
Sbjct: 253 KRCVTFEYVMIEGMNDRLIDAKQLIRLLAD----VPCKINLIPFNSFQGTAYRCSTESAI 308
Query: 836 KIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETD 872
+F K LM++G +R+ RG+DI ACGQL+G+ D
Sbjct: 309 SVFQKCLMDAGFNTRVRRTRGDDIAGACGQLAGQFHD 345
>UNIPROTKB|Q9KTX0 [details] [associations]
symbol:hisS "Histidine--tRNA ligase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004821 "histidine-tRNA
ligase activity" evidence=ISS] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
ProtClustDB:PRK00037 OMA:CGGGNFK PIR:G82283 RefSeq:NP_230409.1
ProteinModelPortal:Q9KTX0 SMR:Q9KTX0 PRIDE:Q9KTX0 DNASU:2615303
GeneID:2615303 KEGG:vch:VC0760 PATRIC:20080631 Uniprot:Q9KTX0
Length = 422
Score = 815 (292.0 bits), Expect = 7.8e-81, P = 7.8e-81
Identities = 169/368 (45%), Positives = 234/368 (63%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE TD+V+KEMY+F D NGD+L+LRPEGTA +RS IEN L+Y+ +RLWY GPMFRHE
Sbjct: 57 GEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHE 115
Query: 928 RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
RPQ GRYRQF+Q GVE G GPD+DAELI+M +RLW+ L + +++ LELNSIG+ R
Sbjct: 116 RPQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARA 175
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
Y LI+Y++++++ ED K +Y N LRVLDSKN ++ IL +AP+L DYL+ +S
Sbjct: 176 NYRTALIDYLEQYQNV--LDEDCKRRMYTNPLRVLDSKNPDVQAILGDAPQLSDYLDAES 233
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
HF G+ ++L+ I Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++CGGGRYD L++
Sbjct: 234 KQHFAGLCELLDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVE 293
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
+ K PA GFA+G+ERL+ +++ + N + D+Y+V G+ + L+E LR
Sbjct: 294 QLGGKPTPAVGFAMGLERLVLMMETLG-NTDVRRSVDVYMVTAGEGTMMAGMKLAEQLRE 352
Query: 1167 L--GLKVILNCVFNNIHESFKSQMKRXXXXXXXXXXXXXXXXXXXXXXXXKDLRNKYEDP 1224
GL+V+ + N FK Q KR KDL E
Sbjct: 353 QVPGLRVMTHFGGGN----FKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGG-EQN 407
Query: 1225 TLKQISIS 1232
T+ Q ++
Sbjct: 408 TVAQAEVA 415
>TIGR_CMR|VC_0760 [details] [associations]
symbol:VC_0760 "histidyl-tRNA synthetase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004821 "histidine-tRNA
ligase activity" evidence=ISS] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
ProtClustDB:PRK00037 OMA:CGGGNFK PIR:G82283 RefSeq:NP_230409.1
ProteinModelPortal:Q9KTX0 SMR:Q9KTX0 PRIDE:Q9KTX0 DNASU:2615303
GeneID:2615303 KEGG:vch:VC0760 PATRIC:20080631 Uniprot:Q9KTX0
Length = 422
Score = 815 (292.0 bits), Expect = 7.8e-81, P = 7.8e-81
Identities = 169/368 (45%), Positives = 234/368 (63%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE TD+V+KEMY+F D NGD+L+LRPEGTA +RS IEN L+Y+ +RLWY GPMFRHE
Sbjct: 57 GEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHE 115
Query: 928 RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
RPQ GRYRQF+Q GVE G GPD+DAELI+M +RLW+ L + +++ LELNSIG+ R
Sbjct: 116 RPQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARA 175
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
Y LI+Y++++++ ED K +Y N LRVLDSKN ++ IL +AP+L DYL+ +S
Sbjct: 176 NYRTALIDYLEQYQNV--LDEDCKRRMYTNPLRVLDSKNPDVQAILGDAPQLSDYLDAES 233
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
HF G+ ++L+ I Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++CGGGRYD L++
Sbjct: 234 KQHFAGLCELLDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVE 293
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
+ K PA GFA+G+ERL+ +++ + N + D+Y+V G+ + L+E LR
Sbjct: 294 QLGGKPTPAVGFAMGLERLVLMMETLG-NTDVRRSVDVYMVTAGEGTMMAGMKLAEQLRE 352
Query: 1167 L--GLKVILNCVFNNIHESFKSQMKRXXXXXXXXXXXXXXXXXXXXXXXXKDLRNKYEDP 1224
GL+V+ + N FK Q KR KDL E
Sbjct: 353 QVPGLRVMTHFGGGN----FKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGG-EQN 407
Query: 1225 TLKQISIS 1232
T+ Q ++
Sbjct: 408 TVAQAEVA 415
>UNIPROTKB|P36979 [details] [associations]
symbol:rlmN "23S rRNA m2A2503 methyltransferase and tRNA
m2A37 methyltransferase" species:83333 "Escherichia coli K-12"
[GO:0000049 "tRNA binding" evidence=IDA] [GO:0002935 "tRNA
(adenine-C2-)-methyltransferase activity" evidence=IMP;IDA]
[GO:0030488 "tRNA methylation" evidence=IMP;IDA] [GO:0070475 "rRNA
base methylation" evidence=IMP] [GO:0046677 "response to
antibiotic" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0070040 "rRNA (adenine-C2-)-methyltransferase activity"
evidence=IEA;IMP;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0046677 GO:GO:0051539
GO:GO:0000049 GO:GO:0070475 eggNOG:COG0820 KO:K06941 GO:GO:0070040
TIGRFAMs:TIGR00048 HOGENOM:HOG000217992 ProtClustDB:PRK11194
EMBL:U02965 PIR:D65028 RefSeq:NP_417012.1 RefSeq:YP_490745.1
PDB:3RF9 PDB:3RFA PDBsum:3RF9 PDBsum:3RFA ProteinModelPortal:P36979
SMR:P36979 DIP:DIP-12035N IntAct:P36979 MINT:MINT-1220055
PaxDb:P36979 PRIDE:P36979 EnsemblBacteria:EBESCT00000004286
EnsemblBacteria:EBESCT00000016514 GeneID:12932308 GeneID:946249
KEGG:ecj:Y75_p2470 KEGG:eco:b2517 PATRIC:32120427 EchoBASE:EB2301
EcoGene:EG12401 OMA:IYHFGVS BioCyc:EcoCyc:EG12401-MONOMER
BioCyc:ECOL316407:JW2501-MONOMER BioCyc:MetaCyc:EG12401-MONOMER
Genevestigator:P36979 GO:GO:0002935 Uniprot:P36979
Length = 384
Score = 814 (291.6 bits), Expect = 1.0e-80, P = 1.0e-80
Identities = 165/347 (47%), Positives = 230/347 (66%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
+LGE PFRA Q+ KW++ + +F++MTD++ LR KLK I+AP ++ +Q S DGT
Sbjct: 34 DLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTI 93
Query: 595 KWIFHVKKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
KW V +ETV+IPE +R TLC+S+QVGCA+ C FCST +QGF RNL V EIIGQ+W
Sbjct: 94 KWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVW 153
Query: 655 VTEFKLRREKNI-KINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
R K + G+R ITN+VMMGMGEPLLN + + A++++L D +GLS+R
Sbjct: 154 ------RAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRR 207
Query: 714 VILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITY 773
V LSTSG++P +DKL V LA+SLHA N+ +R+++VPI+KKY ++ + A RY+
Sbjct: 208 VTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEK 267
Query: 774 SPRHM--ITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSK 831
S + +T EY ML +ND HA +L L++ T CKINLIP+N FP + S
Sbjct: 268 SNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD----TPCKINLIPWNPFPGAPYGRSS 323
Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEM 878
NSRI F+K+LM+ G +RK RG+DI+AACGQL+G+ D K+ +
Sbjct: 324 NSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTL 370
>UNIPROTKB|P60906 [details] [associations]
symbol:hisS "histidyl-tRNA synthetase" species:83333
"Escherichia coli K-12" [GO:0006412 "translation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA;IDA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR002314 InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 Pfam:PF00587 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR DrugBank:DB00131 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 EMBL:M11843 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 HOGENOM:HOG000018072 ProtClustDB:PRK00037
OMA:CGGGNFK PIR:A23890 RefSeq:NP_417009.1 RefSeq:YP_490742.1
PDB:1HTT PDB:1KMM PDB:1KMN PDB:2EL9 PDBsum:1HTT PDBsum:1KMM
PDBsum:1KMN PDBsum:2EL9 ProteinModelPortal:P60906 SMR:P60906
DIP:DIP-35894N IntAct:P60906 MINT:MINT-1236095 SWISS-2DPAGE:P60906
PaxDb:P60906 PRIDE:P60906 EnsemblBacteria:EBESCT00000002076
EnsemblBacteria:EBESCT00000015753 GeneID:12931595 GeneID:946989
KEGG:ecj:Y75_p2467 KEGG:eco:b2514 PATRIC:32120421 EchoBASE:EB0448
EcoGene:EG10453 BioCyc:EcoCyc:HISS-MONOMER
BioCyc:ECOL316407:JW2498-MONOMER BioCyc:MetaCyc:HISS-MONOMER
SABIO-RK:P60906 EvolutionaryTrace:P60906 Genevestigator:P60906
Uniprot:P60906
Length = 424
Score = 808 (289.5 bits), Expect = 4.8e-80, P = 4.8e-80
Identities = 166/368 (45%), Positives = 233/368 (63%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE TD+V+KEMY+F D NGD+L+LRPEGTA +R+ IE+ L+Y+ +RLWY GPMFRHE
Sbjct: 57 GEVTDVVEKEMYTFEDR-NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHE 115
Query: 928 RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
RPQ GRYRQF+Q+G E G GPDIDAELI++ +R W+ L + +++ LELNSIG+ R
Sbjct: 116 RPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARA 175
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
Y L+ ++++HK+ ED K +Y N LRVLDSKN ++ +L +AP L DYL+++S
Sbjct: 176 NYRDALVAFLEQHKEK--LDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEES 233
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
+HF G+ K+L I+Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L++
Sbjct: 234 REHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVE 293
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
+ + PA GFA+G+ERL+ L++ +N DIY+V G + + A L+E LR
Sbjct: 294 QLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQSAAMALAERLRD 353
Query: 1167 L--GLKVILNCVFNNIHESFKSQMKRXXXXXXXXXXXXXXXXXXXXXXXXKDLRNKYEDP 1224
G+K++ N N FK Q R KDLR+ E
Sbjct: 354 ELPGVKLMTNHGGGN----FKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSG-EQT 408
Query: 1225 TLKQISIS 1232
+ Q S++
Sbjct: 409 AVAQDSVA 416
>UNIPROTKB|Q47WB7 [details] [associations]
symbol:rlmN "Dual-specificity RNA methyltransferase RlmN"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01849 InterPro:IPR004383
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0008033 GO:GO:0001510
eggNOG:COG0820 KO:K06941 OMA:MACDFCA GO:GO:0070040
TIGRFAMs:TIGR00048 RefSeq:YP_270905.1 ProteinModelPortal:Q47WB7
STRING:Q47WB7 GeneID:3518965 KEGG:cps:CPS_4255 PATRIC:21471375
HOGENOM:HOG000217992 ProtClustDB:PRK11194
BioCyc:CPSY167879:GI48-4265-MONOMER Uniprot:Q47WB7
Length = 386
Score = 803 (287.7 bits), Expect = 1.7e-79, P = 1.7e-79
Identities = 176/378 (46%), Positives = 239/378 (63%)
Query: 530 KNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQIS 589
+ + +GE PFRA Q+ KWI+ FG SDF +MT+++ LR+KL+ + I AP I Q+S
Sbjct: 19 REYLESIGEKPFRADQIMKWIYHFGYSDFEQMTNINKKLREKLQRNCIISAPDISEKQVS 78
Query: 590 FDGTRKWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGE 648
DGT K+ ++ +ETV+IPE +R TLC+S+QVGCA+ C FC+T +QGF RNL++ E
Sbjct: 79 EDGTIKYALKLEGGQEVETVWIPENDRATLCVSSQVGCALECTFCATAQQGFNRNLSMAE 138
Query: 649 IIGQLWVTEFKLRREKNIKINS-QGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAY 707
IIGQ+W R +I G R ITNIVMMGMGEPLLN K+ I AL +L+D Y
Sbjct: 139 IIGQVW------RVANDIGATRIAGTRPITNIVMMGMGEPLLNMKNLIPALDTMLNDLGY 192
Query: 708 GLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILAC 767
GLS+R V +STSG++P +D L + LA+S+HA NN LR++LVPI+KKYPL++ I A
Sbjct: 193 GLSKRRVTVSTSGVVPALDMLKAKIDCALAISIHAPNNKLRDELVPINKKYPLEDFIAAA 252
Query: 768 HRYITYSPRH-MITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSN 826
RYI S + T EY ML +ND+ A EL + K L S KINLIPFN +P S
Sbjct: 253 GRYIEGSKANKQATIEYVMLDHVNDSTDQAHELAHAL---KGLPS-KINLIPFNPYPGSP 308
Query: 827 LICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEMYSFIDELN 886
S NSRI F K+L + G+ V R+ RG DI+AACGQL+G+ D K+ + +
Sbjct: 309 YSRSSNSRIDRFDKVLQSYGLTVITRRTRGEDIDAACGQLAGDVFDRTKRSVINAAKNAE 368
Query: 887 GDNLSLRPEGTASVIRSV 904
+L +P+ I+ V
Sbjct: 369 ISSLKNQPKADTISIKVV 386
>TIGR_CMR|CPS_4255 [details] [associations]
symbol:CPS_4255 "radical SAM enzyme, Cfr family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 OMA:MACDFCA
GO:GO:0070040 TIGRFAMs:TIGR00048 RefSeq:YP_270905.1
ProteinModelPortal:Q47WB7 STRING:Q47WB7 GeneID:3518965
KEGG:cps:CPS_4255 PATRIC:21471375 HOGENOM:HOG000217992
ProtClustDB:PRK11194 BioCyc:CPSY167879:GI48-4265-MONOMER
Uniprot:Q47WB7
Length = 386
Score = 803 (287.7 bits), Expect = 1.7e-79, P = 1.7e-79
Identities = 176/378 (46%), Positives = 239/378 (63%)
Query: 530 KNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQIS 589
+ + +GE PFRA Q+ KWI+ FG SDF +MT+++ LR+KL+ + I AP I Q+S
Sbjct: 19 REYLESIGEKPFRADQIMKWIYHFGYSDFEQMTNINKKLREKLQRNCIISAPDISEKQVS 78
Query: 590 FDGTRKWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGE 648
DGT K+ ++ +ETV+IPE +R TLC+S+QVGCA+ C FC+T +QGF RNL++ E
Sbjct: 79 EDGTIKYALKLEGGQEVETVWIPENDRATLCVSSQVGCALECTFCATAQQGFNRNLSMAE 138
Query: 649 IIGQLWVTEFKLRREKNIKINS-QGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAY 707
IIGQ+W R +I G R ITNIVMMGMGEPLLN K+ I AL +L+D Y
Sbjct: 139 IIGQVW------RVANDIGATRIAGTRPITNIVMMGMGEPLLNMKNLIPALDTMLNDLGY 192
Query: 708 GLSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILAC 767
GLS+R V +STSG++P +D L + LA+S+HA NN LR++LVPI+KKYPL++ I A
Sbjct: 193 GLSKRRVTVSTSGVVPALDMLKAKIDCALAISIHAPNNKLRDELVPINKKYPLEDFIAAA 252
Query: 768 HRYITYSPRH-MITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSN 826
RYI S + T EY ML +ND+ A EL + K L S KINLIPFN +P S
Sbjct: 253 GRYIEGSKANKQATIEYVMLDHVNDSTDQAHELAHAL---KGLPS-KINLIPFNPYPGSP 308
Query: 827 LICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKEMYSFIDELN 886
S NSRI F K+L + G+ V R+ RG DI+AACGQL+G+ D K+ + +
Sbjct: 309 YSRSSNSRIDRFDKVLQSYGLTVITRRTRGEDIDAACGQLAGDVFDRTKRSVINAAKNAE 368
Query: 887 GDNLSLRPEGTASVIRSV 904
+L +P+ I+ V
Sbjct: 369 ISSLKNQPKADTISIKVV 386
>UNIPROTKB|Q8EC36 [details] [associations]
symbol:der "GTPase Der" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_718862.1 ProteinModelPortal:Q8EC36
GeneID:1170993 KEGG:son:SO_3308 PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 802 (287.4 bits), Expect = 2.2e-79, P = 2.2e-79
Identities = 175/447 (39%), Positives = 250/447 (55%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 E--PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVX 118
+ E + M E + + G + + + V+
Sbjct: 61 DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAA--DLSIAQHLRSRQKTTFVVAN 118
Query: 119 XXXXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+F+ LG+G + ++A G G+ N +E LT ++ E +
Sbjct: 119 KIDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEEEEVD 178
Query: 179 SIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
+Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 179 ERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIY 238
Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
E + ++Y++IDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ ++ QD
Sbjct: 239 IPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQD 298
Query: 283 INIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNIN 342
+ + F +GR+L++ VNKWD F+ FA +FISA+ +
Sbjct: 299 LGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVG 358
Query: 343 SFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVI 402
ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+VI
Sbjct: 359 HLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVI 418
Query: 403 HGNRLKYIGNDYKRYLEKYFYRTFSLI 429
HGN++ + + YKRY+ YF R+ ++
Sbjct: 419 HGNQVSKLPDSYKRYMMNYFRRSLKVV 445
>TIGR_CMR|SO_3308 [details] [associations]
symbol:SO_3308 "GTP-binding protein EngA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 RefSeq:NP_718862.1
ProteinModelPortal:Q8EC36 GeneID:1170993 KEGG:son:SO_3308
PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 802 (287.4 bits), Expect = 2.2e-79, P = 2.2e-79
Identities = 175/447 (39%), Positives = 250/447 (55%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 E--PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVX 118
+ E + M E + + G + + + V+
Sbjct: 61 DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAA--DLSIAQHLRSRQKTTFVVAN 118
Query: 119 XXXXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+F+ LG+G + ++A G G+ N +E LT ++ E +
Sbjct: 119 KIDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEEEEVD 178
Query: 179 SIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
+Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 179 ERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIY 238
Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
E + ++Y++IDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ ++ QD
Sbjct: 239 IPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQD 298
Query: 283 INIANFIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNIN 342
+ + F +GR+L++ VNKWD F+ FA +FISA+ +
Sbjct: 299 LGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVG 358
Query: 343 SFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVI 402
ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+VI
Sbjct: 359 HLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVI 418
Query: 403 HGNRLKYIGNDYKRYLEKYFYRTFSLI 429
HGN++ + + YKRY+ YF R+ ++
Sbjct: 419 HGNQVSKLPDSYKRYMMNYFRRSLKVV 445
>UNIPROTKB|Q9KTX3 [details] [associations]
symbol:rlmN "Dual-specificity RNA methyltransferase RlmN"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051539
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 OMA:MACDFCA
GO:GO:0070040 TIGRFAMs:TIGR00048 ProtClustDB:PRK11194 PIR:D82283
RefSeq:NP_230406.1 ProteinModelPortal:Q9KTX3 DNASU:2615300
GeneID:2615300 KEGG:vch:VC0757 PATRIC:20080625 Uniprot:Q9KTX3
Length = 373
Score = 789 (282.8 bits), Expect = 6.3e-78, P = 6.3e-78
Identities = 165/344 (47%), Positives = 226/344 (65%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
ELGE FRA+Q+ KWI+ FG DF++M +++ LR+KLK I+AP++ Q S DGT
Sbjct: 23 ELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLKAKCEIRAPYVSEAQHSADGTI 82
Query: 595 KWIFHVKKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
KW V +ETV+IPE +R TLC+S+QVGCA+ C FCST +QGF RNL V EIIGQ+W
Sbjct: 83 KWAMRVGDQDVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVW 142
Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
+ RE ++ G+R ITN+VMMGMGEPLLN K+ I AL+++L D +GLS+R V
Sbjct: 143 ----RAAREIGLE-KETGRRPITNVVMMGMGEPLLNMKNLIPALEIMLDDLGFGLSKRRV 197
Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
+STSG++ ++++ + V LA+SLHA N+ LR++++PI+ ++ ++ + RYI S
Sbjct: 198 TVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDRWNIEAFLEVVRRYIASS 257
Query: 775 P--RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
R +T EY +L +ND HA EL L++ T CKINLIPFN +P S N
Sbjct: 258 NANRGKVTVEYVLLDHVNDGTEHAHELAELLKG----TPCKINLIPFNPYPGSPYKKPSN 313
Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
SRI F K LM VTIRK RG+DI+AACGQL G+ D K+
Sbjct: 314 SRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKR 357
>TIGR_CMR|VC_0757 [details] [associations]
symbol:VC_0757 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01849
InterPro:IPR004383 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF006004 SMART:SM00729
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051539 GO:GO:0008033 GO:GO:0001510
eggNOG:COG0820 KO:K06941 OMA:MACDFCA GO:GO:0070040
TIGRFAMs:TIGR00048 ProtClustDB:PRK11194 PIR:D82283
RefSeq:NP_230406.1 ProteinModelPortal:Q9KTX3 DNASU:2615300
GeneID:2615300 KEGG:vch:VC0757 PATRIC:20080625 Uniprot:Q9KTX3
Length = 373
Score = 789 (282.8 bits), Expect = 6.3e-78, P = 6.3e-78
Identities = 165/344 (47%), Positives = 226/344 (65%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
ELGE FRA+Q+ KWI+ FG DF++M +++ LR+KLK I+AP++ Q S DGT
Sbjct: 23 ELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLKAKCEIRAPYVSEAQHSADGTI 82
Query: 595 KWIFHVKKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLW 654
KW V +ETV+IPE +R TLC+S+QVGCA+ C FCST +QGF RNL V EIIGQ+W
Sbjct: 83 KWAMRVGDQDVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVW 142
Query: 655 VTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHV 714
+ RE ++ G+R ITN+VMMGMGEPLLN K+ I AL+++L D +GLS+R V
Sbjct: 143 ----RAAREIGLE-KETGRRPITNVVMMGMGEPLLNMKNLIPALEIMLDDLGFGLSKRRV 197
Query: 715 ILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
+STSG++ ++++ + V LA+SLHA N+ LR++++PI+ ++ ++ + RYI S
Sbjct: 198 TVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDRWNIEAFLEVVRRYIASS 257
Query: 775 P--RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
R +T EY +L +ND HA EL L++ T CKINLIPFN +P S N
Sbjct: 258 NANRGKVTVEYVLLDHVNDGTEHAHELAELLKG----TPCKINLIPFNPYPGSPYKKPSN 313
Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
SRI F K LM VTIRK RG+DI+AACGQL G+ D K+
Sbjct: 314 SRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKR 357
>TIGR_CMR|SO_3311 [details] [associations]
symbol:SO_3311 "histidyl-tRNA synthetase" species:211586
"Shewanella oneidensis MR-1" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE014299 GenomeReviews:AE014299_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018072 ProtClustDB:PRK00037 OMA:CGGGNFK
RefSeq:NP_718865.1 ProteinModelPortal:Q8EC33 SMR:Q8EC33
GeneID:1170996 KEGG:son:SO_3311 PATRIC:23526298 Uniprot:Q8EC33
Length = 425
Score = 774 (277.5 bits), Expect = 2.9e-76, P = 2.9e-76
Identities = 157/368 (42%), Positives = 236/368 (64%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE TDIV+KEMY+F D NGD+L+LRPEGTAS +R+ E+ L+Y+ +RLWY GPMFRHE
Sbjct: 57 GEVTDIVEKEMYTFEDR-NGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHE 115
Query: 928 RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
RPQ GRYRQF+Q GVE G DIDAE++++ +RLW+ L + +++ LELN++G+ ER
Sbjct: 116 RPQKGRYRQFHQFGVEIYGIGSADIDAEVLMLSARLWEKLGITEHVTLELNTLGDPAERA 175
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
Y LI ++++HKD ED + +Y N LRVLDSK+ ++ IL +AP L+DYL ++S
Sbjct: 176 AYREALIAFLEQHKDK--LDEDSQRRMYSNPLRVLDSKDPQVQSILADAPALMDYLGEES 233
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
HF ++++L+ I Y++N++LVRG+DYYNRTVFEW T+ LGSQ ++ GGRYD L+
Sbjct: 234 SQHFAQLRELLDAVGIQYRVNSRLVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVA 293
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
+ K PA GFA+G+ER++ L++ + + + + D+Y+ +G ++A +++ LR+
Sbjct: 294 QLGGKETPAVGFAMGLERIVLLLETLALTQDIPAEVDVYVAAMGDNCLVEAIKVAQELRS 353
Query: 1167 L--GLKVILNCVFNNIHESFKSQMKRXXXXXXXXXXXXXXXXXXXXXXXXKDLRNKYEDP 1224
L+V+ +C N+ K QMKR K LRN E
Sbjct: 354 ALPTLRVMSHCGGGNL----KKQMKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQ 409
Query: 1225 TLKQISIS 1232
+ + ++S
Sbjct: 410 RVARNALS 417
>TIGR_CMR|CBU_1248 [details] [associations]
symbol:CBU_1248 "histidyl-tRNA synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE016828 GenomeReviews:AE016828_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018072 ProtClustDB:PRK00037 RefSeq:NP_820243.1
ProteinModelPortal:Q83C80 GeneID:1209153 KEGG:cbu:CBU_1248
PATRIC:17931229 OMA:HCKEATA BioCyc:CBUR227377:GJ7S-1234-MONOMER
Uniprot:Q83C80
Length = 421
Score = 757 (271.5 bits), Expect = 2.1e-74, P = 2.1e-74
Identities = 152/324 (46%), Positives = 213/324 (65%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE TDIV+KEMY+F D NGD+L+LRPEGTA +R+ I+N L Y+ +RLWY GPMFRHE
Sbjct: 57 GEATDIVEKEMYTFTDR-NGDSLTLRPEGTAGCVRAGIQNGLFYNQIQRLWYLGPMFRHE 115
Query: 928 RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKN-ICLELNSIGNFNERK 986
RPQ GRYRQFYQ+GVE G G I+AELI MC RLWK L L++ I LELN++G + R
Sbjct: 116 RPQKGRYRQFYQLGVETYGMAGAPIEAELIFMCLRLWKALGLESCIHLELNTLGTLDSRN 175
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
Y L+ Y++ + K ED + L+ N LR+LDSKN ++ +L APKL+DYL++ S
Sbjct: 176 AYRQALVTYLQSRE--KELDEDSRRRLHTNPLRILDSKNPDLQPLLAEAPKLIDYLDETS 233
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
HF ++ +L+ + + +N LVRG+DYY TVFEW TD+LG+Q ++C GGRYD L++
Sbjct: 234 RRHFDQLRSLLDQAEVPFIVNPTLVRGLDYYTHTVFEWVTDQLGAQGTVCAGGRYDNLVE 293
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
K PA+GFA G+ERL+ L++ + + DIY+V G+ + +++E LR
Sbjct: 294 LLGGKSTPAAGFAAGLERLVLLLRGVQ---ECLDKIDIYVVIAGEAVIQEGLLMTEQLRN 350
Query: 1167 LGLKVILNCVFNNIHESFKSQMKR 1190
+ + ++ + S KSQ KR
Sbjct: 351 VLPEWVIEADLSG--SSLKSQFKR 372
>UNIPROTKB|Q74AX4 [details] [associations]
symbol:der "GTPase Der" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 709 (254.6 bits), Expect = 3.7e-69, P = 3.7e-69
Identities = 159/427 (37%), Positives = 237/427 (55%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y FI+IDTGGFEP
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEP 63
Query: 63 EVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIV-LVXXXX 121
E ++ +M +Q++ A +DGR GL D + LR+ +P+ +V
Sbjct: 64 ESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVFFVVNKVD 123
Query: 122 XXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
+FY LG+ N ISA + G+++ ++ ++ LP + T+
Sbjct: 124 GETLEVAASEFYSLGVDNLLTISAEHNRGVRDLMDEVVAA-LPQRT-------TSPEERN 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
K+A+VG+PNVGKS+L+N LLG RV+ TPGTTRDS+ + F N K+Y+LIDTAGIR
Sbjct: 176 ATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAGIR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
R+ KT + IEK+SV+ +L+SI A+VV+++L+A++ ++ QD IA + +E+G++ I VN
Sbjct: 236 RKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGKACIFVVN 295
Query: 302 KWDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD+ F L+F F+SA +N ME + V + +
Sbjct: 296 KWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKVMAQYVKRV 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+TS + R +A+++H R K +A Q G PP VI NR + Y+RYL
Sbjct: 356 TTSELNRIFSAAVESHHHPLVMGRRVKFYFATQVGTRPPTFVIFTNRPDGMHFSYERYLV 415
Query: 420 KYFYRTF 426
F F
Sbjct: 416 NKFREAF 422
>TIGR_CMR|GSU_2225 [details] [associations]
symbol:GSU_2225 "GTP-binding protein Era, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 709 (254.6 bits), Expect = 3.7e-69, P = 3.7e-69
Identities = 159/427 (37%), Positives = 237/427 (55%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y FI+IDTGGFEP
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEP 63
Query: 63 EVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIV-LVXXXX 121
E ++ +M +Q++ A +DGR GL D + LR+ +P+ +V
Sbjct: 64 ESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVFFVVNKVD 123
Query: 122 XXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
+FY LG+ N ISA + G+++ ++ ++ LP + T+
Sbjct: 124 GETLEVAASEFYSLGVDNLLTISAEHNRGVRDLMDEVVAA-LPQRT-------TSPEERN 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
K+A+VG+PNVGKS+L+N LLG RV+ TPGTTRDS+ + F N K+Y+LIDTAGIR
Sbjct: 176 ATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAGIR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
R+ KT + IEK+SV+ +L+SI A+VV+++L+A++ ++ QD IA + +E+G++ I VN
Sbjct: 236 RKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGKACIFVVN 295
Query: 302 KWDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD+ F L+F F+SA +N ME + V + +
Sbjct: 296 KWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKVMAQYVKRV 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+TS + R +A+++H R K +A Q G PP VI NR + Y+RYL
Sbjct: 356 TTSELNRIFSAAVESHHHPLVMGRRVKFYFATQVGTRPPTFVIFTNRPDGMHFSYERYLV 415
Query: 420 KYFYRTF 426
F F
Sbjct: 416 NKFREAF 422
>TIGR_CMR|SPO_3346 [details] [associations]
symbol:SPO_3346 "radical SAM enzyme, Cfr family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0051539
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 OMA:MACDFCA
GO:GO:0070040 TIGRFAMs:TIGR00048 HOGENOM:HOG000217992
RefSeq:YP_168542.1 ProteinModelPortal:Q5LN66 GeneID:3195026
KEGG:sil:SPO3346 PATRIC:23380143 ProtClustDB:CLSK934133
Uniprot:Q5LN66
Length = 393
Score = 675 (242.7 bits), Expect = 1.8e-65, P = 1.8e-65
Identities = 143/336 (42%), Positives = 208/336 (61%)
Query: 542 RAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHVK 601
R Q+ +WI+++GV DF MT+L+ + R +L I+ P +++ +S DGTRK++ +
Sbjct: 50 RVGQIWQWIYQWGVRDFEAMTNLAKAYRAQLAEHFTIEIPEVITRLVSEDGTRKYLVRIA 109
Query: 602 K-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTEFKL 660
+ +E V+IPE++R TLCIS+QVGC + C FC TG Q VRNLT EI+GQ+ + L
Sbjct: 110 GGHEVEVVYIPEEDRGTLCISSQVGCTLTCSFCHTGTQKLVRNLTAAEIVGQVMMARDDL 169
Query: 661 RREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVILSTSG 720
R ++NIV+MGMGEPL N+ + A+K+ + LSRR + LSTSG
Sbjct: 170 GEWPVPGAPKDETRLLSNIVLMGMGEPLYNFDNVRDAMKIAMDPEGIQLSRRRITLSTSG 229
Query: 721 IIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSPRHMIT 780
++P I + A+E LA+S HA+ + +R+ LVPI+K++ ++EL+ A Y S IT
Sbjct: 230 VVPEIARTAEEIGCLLAISFHATTDEVRDVLVPINKRWNIEELLSALAAYPKVSNSERIT 289
Query: 781 FEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRIKIFAK 840
FEY ML G+ND+D A L+ +R+ KI KINLIPFN +P + S N+RI+ FA
Sbjct: 290 FEYVMLDGVNDSDADAHRLLDHIRRYKI--PAKINLIPFNEWPGAPYKRSSNNRIRAFAN 347
Query: 841 ILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKK 876
I+ +G IRK RG+DI AACGQL T+ +K
Sbjct: 348 IIYQAGYAAPIRKTRGDDIMAACGQLKSA-TERARK 382
>TIGR_CMR|CHY_1919 [details] [associations]
symbol:CHY_1919 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0017111 eggNOG:COG1160 HOGENOM:HOG000242861
KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR RefSeq:YP_360738.1 ProteinModelPortal:Q3AAU6
STRING:Q3AAU6 GeneID:3728232 KEGG:chy:CHY_1919 PATRIC:21276929
BioCyc:CHYD246194:GJCN-1918-MONOMER Uniprot:Q3AAU6
Length = 440
Score = 663 (238.4 bits), Expect = 3.5e-64, P = 3.5e-64
Identities = 156/443 (35%), Positives = 242/443 (54%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFNR+ R A+V + PG+TRDR Y E K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEWQGKVFDLIDTGGLE 62
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXX 121
+ I ++ +Q ++A D R+G+ D+ + LRKS +P++LV
Sbjct: 63 FS-EDLITTKVREQIEKAINEADLILFVCDSREGITSTDEAVAKNLRKSDKPVILVANKV 121
Query: 122 XXXXX--XXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
D Y LG+G P +SA G + + L+ +++ +L + + ++ +
Sbjct: 122 DDYLNPPANFYDLYRLGLGEPFPVSAANGTNVGDLLDLVIS-KLNFPEDYEDEN------ 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+A+VG+PNVGKS+L+N+LLGE RV+ D PGTTRD+I + Y K Y+LIDTAG
Sbjct: 175 -PVVKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E +E++SV +++K+I A+V +L++ A++ ++ QD IA I+E GR +I+
Sbjct: 234 MRRKSRIEEDLERYSVNRSIKAIRRADVALLVISAEEGVTEQDKKIAGLIHEYGRGVIIV 293
Query: 300 VNKWD--SXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD FL +A F+SA +N ME ++ V
Sbjct: 294 VNKWDLIEKDAKTADRYKEHIYFELGFLKYAPVIFVSAKTGQRLNKLMELVDRVSFEHQK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRP-KLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++TS + + L A+ +PP + RP K+ YA Q PP + N + + Y R
Sbjct: 354 RVATSILNQVLREAVVLNPPPADRG-RPLKIYYATQIETKPPTFALFVNDAELMHFSYLR 412
Query: 417 YLEKYFYRTFSLIDALEKNIVGE 439
YLE F + F K ++ E
Sbjct: 413 YLENVFRQNFGFEGTTLKFVLRE 435
>UNIPROTKB|Q3Z6P5 [details] [associations]
symbol:der "GTPase Der" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 642 (231.1 bits), Expect = 6.5e-62, P = 6.5e-62
Identities = 135/426 (31%), Positives = 233/426 (54%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGE-GYIGKKSFIIIDTGGFE 61
P++ +VGR NVGKSTL NRL + A+ + PG TRDR + ++ ++ I++DTGG +
Sbjct: 6 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRR-LIMVDTGGLD 64
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXX 121
P+++ I ++ Q A VD + GL+ D + + +R++G+P++LV
Sbjct: 65 PDLESIIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTGKPVILVANKA 124
Query: 122 XXXXXXX-XLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+FY LG G P +ISA +G+GI + ++ +L ELP + +E ++
Sbjct: 125 DNLKMGQEAAEFYSLGFGEPSVISAFHGSGISDLMDRVLE-ELPDQPIATPEEDNSV--- 180
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
K+A+VG+ NVGKSTL+N+ +G+ R I + PGTTRD+I + +N +LIDTAGI
Sbjct: 181 ---KLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR K +EK+SV++ LK++ A++V+L++D ++ ++AQD +IA ++ ++ + +I+ +
Sbjct: 238 RRRGKVESGVEKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKGIIIIL 297
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD FL +A F+S +++ + V + +
Sbjct: 298 NKWDLGKGQDKAEVTQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKVQEERNKRIP 357
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
T+++ + A+ H P + + K+ YA Q NPP V N K + Y+R++E
Sbjct: 358 TAKVNSVVTEALSAHTPPHQGKTQLKIYYATQADTNPPSFVFFVNNPKLVHFSYERFIEN 417
Query: 421 YFYRTF 426
+F
Sbjct: 418 RLRESF 423
>TIGR_CMR|DET_1395 [details] [associations]
symbol:DET_1395 "GTP-binding protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 642 (231.1 bits), Expect = 6.5e-62, P = 6.5e-62
Identities = 135/426 (31%), Positives = 233/426 (54%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGE-GYIGKKSFIIIDTGGFE 61
P++ +VGR NVGKSTL NRL + A+ + PG TRDR + ++ ++ I++DTGG +
Sbjct: 6 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRR-LIMVDTGGLD 64
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXX 121
P+++ I ++ Q A VD + GL+ D + + +R++G+P++LV
Sbjct: 65 PDLESIIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTGKPVILVANKA 124
Query: 122 XXXXXXX-XLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+FY LG G P +ISA +G+GI + ++ +L ELP + +E ++
Sbjct: 125 DNLKMGQEAAEFYSLGFGEPSVISAFHGSGISDLMDRVLE-ELPDQPIATPEEDNSV--- 180
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
K+A+VG+ NVGKSTL+N+ +G+ R I + PGTTRD+I + +N +LIDTAGI
Sbjct: 181 ---KLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR K +EK+SV++ LK++ A++V+L++D ++ ++AQD +IA ++ ++ + +I+ +
Sbjct: 238 RRRGKVESGVEKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKGIIIIL 297
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD FL +A F+S +++ + V + +
Sbjct: 298 NKWDLGKGQDKAEVTQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKVQEERNKRIP 357
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
T+++ + A+ H P + + K+ YA Q NPP V N K + Y+R++E
Sbjct: 358 TAKVNSVVTEALSAHTPPHQGKTQLKIYYATQADTNPPSFVFFVNNPKLVHFSYERFIEN 417
Query: 421 YFYRTF 426
+F
Sbjct: 418 RLRESF 423
>DICTYBASE|DDB_G0288255 [details] [associations]
symbol:DDB_G0288255 "putative ribosomal RNA large
subunit methyltransferase N" species:44689 "Dictyostelium
discoideum" [GO:0051536 "iron-sulfur cluster binding" evidence=IEA]
[GO:0008173 "RNA methyltransferase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0001510 "RNA methylation" evidence=IEA] HAMAP:MF_01849
InterPro:IPR004383 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF006004 SMART:SM00729
dictyBase:DDB_G0288255 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0051536 EMBL:AAFI02000109 GO:GO:0006364 GO:GO:0008173
GO:GO:0001510 eggNOG:COG0820 TIGRFAMs:TIGR00048 OMA:EMVFIPD
RefSeq:XP_636811.1 ProteinModelPortal:Q54J76 STRING:Q54J76
EnsemblProtists:DDB0304824 GeneID:8626528 KEGG:ddi:DDB_G0288255
InParanoid:Q54J76 Uniprot:Q54J76
Length = 407
Score = 641 (230.7 bits), Expect = 8.3e-62, P = 8.3e-62
Identities = 145/369 (39%), Positives = 218/369 (59%)
Query: 510 TDPIKAAKGT-IRADFAESIDKNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSL 568
TD IK I+ D E DK V +LG + ++Q+ +++ G+ D N +S
Sbjct: 43 TDIIKKINLIGIQKDELE--DK--VLKLGYPKYLSEQIWAFMYNKGIVDINSFERVSKEK 98
Query: 569 RKKLKNSVYIKAPHIMSDQISFDGTRKWIFHVKKNIIETVFIPEKNRNTLCISTQVGCAI 628
R+++K+ + I Q+S DGTRK + +E+VFIPE R TLC+S+QVGC
Sbjct: 99 REEIKSKYEVNIGEITKHQLSVDGTRKLLISFDGAEVESVFIPEGKRGTLCVSSQVGCTF 158
Query: 629 NCIFCSTGRQGFVRNLTVGEIIGQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPL 688
C FC TG Q F+RNLT EI+ Q+ T L N +S KR +TNIV MG GEP
Sbjct: 159 ACTFCHTGTQKFIRNLTASEIVSQVIATRHVL----NDFTDSSIKRTLTNIVFMGQGEPF 214
Query: 689 LNYKSTIGALKLILSDHAYGLSRRHVILSTSGIIPMIDKLAQECP-VELAVSLHASNNNL 747
NY++ A+K+I + + + + +STSG++P+ID+L + P + LA+SLH++N+
Sbjct: 215 YNYRNVSKAIKIITDPNGLAIGKSKITVSTSGVVPLIDRLGSDFPGIGLAISLHSANDKT 274
Query: 748 RNKLVPISKKYPLKELILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNK 807
R+++VP ++++P+ EL+ AC ++ + + + IT EY ML G+ND++ A +L+ L +K
Sbjct: 275 RSEIVPANRQWPISELVEACIKF-SKNCKERITIEYVMLKGVNDSEQDAYDLVKL---SK 330
Query: 808 ILTSCKINLIPFNCFPNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLS 867
S +NLIPFN +P S S I F+KIL + GI VTIR+ RG DI AACGQL+
Sbjct: 331 SFPSF-VNLIPFNPWPGSQYKSSSKETISQFSKILDDKGIKVTIRQPRGRDILAACGQLN 389
Query: 868 GEETDIVKK 876
E + K
Sbjct: 390 TESIKEINK 398
>UNIPROTKB|Q81SW9 [details] [associations]
symbol:der "GTPase Der" species:1392 "Bacillus anthracis"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042254 RefSeq:NP_843976.1
RefSeq:YP_018148.1 RefSeq:YP_027683.1 ProteinModelPortal:Q81SW9
SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 622 (224.0 bits), Expect = 9.3e-60, P = 9.3e-60
Identities = 140/431 (32%), Positives = 232/431 (53%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG +
Sbjct: 3 KPVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL-VXXX 120
+ + ++ +Q + A +GR G+ D+ + L +S +P+VL V
Sbjct: 63 IG-DEPFLTQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSNKPVVLAVNKV 121
Query: 121 XXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
DFY LG G P IS +G G+ + L+ + F K E +
Sbjct: 122 DNPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDEAA-------QHFPKIEEDG-YDE 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+ +++G+PNVGKS+L+N+LLG+ RVI + GTTRD++ + + + K Y++IDTAG+
Sbjct: 174 DTIRFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ L++I ++VV+++LD ++ I QD IA + ++SGR++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYAHDSGRAVVIVV 293
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+ F L +A F+SA + + I+ V +S I
Sbjct: 294 NKWDAVKKDEKTMKAFEENIRAHFQFLEYAPIVFLSAKTRKRTQTLIPVIDEVNESHSIR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ + ++ A+ +P R K+ YA Q PP V+ N + + Y+R+L
Sbjct: 354 IQTNVLNDVIMDAVAMNPTPTHNGSRLKIFYATQVAVKPPTFVVFVNDPELLHFSYERFL 413
Query: 419 EKYFYRTFSLI 429
+ +F +
Sbjct: 414 KNRLRESFGFV 424
>TIGR_CMR|BA_1525 [details] [associations]
symbol:BA_1525 "GTPase family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0042254
RefSeq:NP_843976.1 RefSeq:YP_018148.1 RefSeq:YP_027683.1
ProteinModelPortal:Q81SW9 SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 622 (224.0 bits), Expect = 9.3e-60, P = 9.3e-60
Identities = 140/431 (32%), Positives = 232/431 (53%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG +
Sbjct: 3 KPVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL-VXXX 120
+ + ++ +Q + A +GR G+ D+ + L +S +P+VL V
Sbjct: 63 IG-DEPFLTQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSNKPVVLAVNKV 121
Query: 121 XXXXXXXXXLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
DFY LG G P IS +G G+ + L+ + F K E +
Sbjct: 122 DNPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDEAA-------QHFPKIEEDG-YDE 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+ +++G+PNVGKS+L+N+LLG+ RVI + GTTRD++ + + + K Y++IDTAG+
Sbjct: 174 DTIRFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ L++I ++VV+++LD ++ I QD IA + ++SGR++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYAHDSGRAVVIVV 293
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+ F L +A F+SA + + I+ V +S I
Sbjct: 294 NKWDAVKKDEKTMKAFEENIRAHFQFLEYAPIVFLSAKTRKRTQTLIPVIDEVNESHSIR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ + ++ A+ +P R K+ YA Q PP V+ N + + Y+R+L
Sbjct: 354 IQTNVLNDVIMDAVAMNPTPTHNGSRLKIFYATQVAVKPPTFVVFVNDPELLHFSYERFL 413
Query: 419 EKYFYRTFSLI 429
+ +F +
Sbjct: 414 KNRLRESFGFV 424
>TIGR_CMR|GSU_1659 [details] [associations]
symbol:GSU_1659 "histidyl-tRNA synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018072 ProtClustDB:PRK00037 OMA:HCKEATA
RefSeq:NP_952710.1 ProteinModelPortal:P60915 GeneID:2685305
KEGG:gsu:GSU1659 PATRIC:22026167
BioCyc:GSUL243231:GH27-1651-MONOMER Uniprot:P60915
Length = 413
Score = 606 (218.4 bits), Expect = 4.9e-58, P = 4.9e-58
Identities = 136/325 (41%), Positives = 198/325 (60%)
Query: 868 GEETDIVKKEMYSFIDELNGDN-LSLRPEGTASVIRSVIENNLIYDGP-KRLWYSGPMFR 925
G+ TDIV+KEMYSF+D+ G+N +++RPEGTASV+RS IE+ L P +L+Y GPMFR
Sbjct: 54 GDTTDIVEKEMYSFVDK--GENAVTMRPEGTASVMRSYIEHKLYAQDPVAKLYYMGPMFR 111
Query: 926 HERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNER 985
+ERPQ GRYRQF+QIG E G P +DA+++ M + L L L++NS+G R
Sbjct: 112 YERPQKGRYRQFHQIGAEVTGVTDPKVDAQVLTMLCHYFAELGLTEPTLQINSLGCPECR 171
Query: 986 KKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKD 1045
Y LI+++++ DS CED K N LR LD K+ +E +AP +LD L
Sbjct: 172 PAYRQALIDFLRERLDS--LCEDCKRRYQTNPLRALDCKSAHCKEATASAPAMLDSLCAG 229
Query: 1046 SLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLI 1105
DHF ++ L +Y IN ++VRG+DYY RT FE T LG+Q+++ GGRYD LI
Sbjct: 230 CDDHFTATRRHLERAGTTYSINNRMVRGLDYYTRTTFELVTGLLGAQSAVAAGGRYDGLI 289
Query: 1106 KKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR 1165
+P GFA+G+ER+ L+ + +F + D++I +G+EA+ +AF L L+
Sbjct: 290 SDLGGPAIPGIGFAMGVERIALLLG----DQHFVGRPDLFIAALGEEAQDEAFRLMCGLQ 345
Query: 1166 TLGLKVILNCVFNNIHESFKSQMKR 1190
G+ V ++ + +S KSQM+R
Sbjct: 346 RNGVAVEMD--YEG--KSLKSQMRR 366
>UNIPROTKB|Q81WH4 [details] [associations]
symbol:rlmN "Probable dual-specificity RNA
methyltransferase RlmN" species:1392 "Bacillus anthracis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0051539 GO:GO:0008033 GO:GO:0001510
RefSeq:NP_846244.1 RefSeq:YP_020642.1 RefSeq:YP_029966.1
ProteinModelPortal:Q81WH4 DNASU:1086738
EnsemblBacteria:EBBACT00000012863 EnsemblBacteria:EBBACT00000014022
EnsemblBacteria:EBBACT00000019317 GeneID:1086738 GeneID:2815920
GeneID:2848017 KEGG:ban:BA_4002 KEGG:bar:GBAA_4002 KEGG:bat:BAS3715
eggNOG:COG0820 HOGENOM:HOG000217991 KO:K06941 OMA:MACDFCA
ProtClustDB:PRK14455 BioCyc:BANT260799:GJAJ-3773-MONOMER
BioCyc:BANT261594:GJ7F-3890-MONOMER GO:GO:0070040
TIGRFAMs:TIGR00048 Uniprot:Q81WH4
Length = 362
Score = 594 (214.2 bits), Expect = 9.5e-57, P = 9.5e-57
Identities = 134/338 (39%), Positives = 204/338 (60%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
E GE FRA Q+ W++K V ++ M++LS LR+KL NS I + + Q S DGT
Sbjct: 33 EQGEPKFRAGQIFDWLYKKRVKNYEDMSNLSKGLREKLSNSFDITTLNTLVKQTSSDGTI 92
Query: 595 KWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
K++F + IETV + + N++C++TQVGC I C FC++ G RNL GEI+ Q
Sbjct: 93 KFLFQLYDGYSIETVLMRHEYGNSICVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQ- 151
Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
V E + + + + +++++V+MG+GEP NY + +G L++I + + RH
Sbjct: 152 -VVEVQ-------RALDESEERVSSLVVMGIGEPFDNYDNLMGFLRIINHEKGLHIGARH 203
Query: 714 VILSTSGIIPMIDKLAQE-CPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
+ +STSGIIP I K A+E + A+SLHA N+ LR+KL+PI++ Y L +L+ A Y+
Sbjct: 204 MTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRSKLMPINRAYKLPDLMEAIKYYVN 263
Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
+ R ITFEY + G ND HA EL +L++ K C +NLIP N P + + +
Sbjct: 264 RTGRR-ITFEYGLFGGENDQVEHAEELAALLKGVK----CHVNLIPVNYVPERDYVRTPR 318
Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEE 870
+I +F K L + G+ VTIR+ +G+DI+AACGQL +E
Sbjct: 319 EQIFLFEKTLKDRGVNVTIRREQGHDIDAACGQLRAKE 356
>TIGR_CMR|BA_4002 [details] [associations]
symbol:BA_4002 "conserved hypothetical protein TIGR00048"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0051539 GO:GO:0008033 GO:GO:0001510
RefSeq:NP_846244.1 RefSeq:YP_020642.1 RefSeq:YP_029966.1
ProteinModelPortal:Q81WH4 DNASU:1086738
EnsemblBacteria:EBBACT00000012863 EnsemblBacteria:EBBACT00000014022
EnsemblBacteria:EBBACT00000019317 GeneID:1086738 GeneID:2815920
GeneID:2848017 KEGG:ban:BA_4002 KEGG:bar:GBAA_4002 KEGG:bat:BAS3715
eggNOG:COG0820 HOGENOM:HOG000217991 KO:K06941 OMA:MACDFCA
ProtClustDB:PRK14455 BioCyc:BANT260799:GJAJ-3773-MONOMER
BioCyc:BANT261594:GJ7F-3890-MONOMER GO:GO:0070040
TIGRFAMs:TIGR00048 Uniprot:Q81WH4
Length = 362
Score = 594 (214.2 bits), Expect = 9.5e-57, P = 9.5e-57
Identities = 134/338 (39%), Positives = 204/338 (60%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
E GE FRA Q+ W++K V ++ M++LS LR+KL NS I + + Q S DGT
Sbjct: 33 EQGEPKFRAGQIFDWLYKKRVKNYEDMSNLSKGLREKLSNSFDITTLNTLVKQTSSDGTI 92
Query: 595 KWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQL 653
K++F + IETV + + N++C++TQVGC I C FC++ G RNL GEI+ Q
Sbjct: 93 KFLFQLYDGYSIETVLMRHEYGNSICVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQ- 151
Query: 654 WVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRH 713
V E + + + + +++++V+MG+GEP NY + +G L++I + + RH
Sbjct: 152 -VVEVQ-------RALDESEERVSSLVVMGIGEPFDNYDNLMGFLRIINHEKGLHIGARH 203
Query: 714 VILSTSGIIPMIDKLAQE-CPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYIT 772
+ +STSGIIP I K A+E + A+SLHA N+ LR+KL+PI++ Y L +L+ A Y+
Sbjct: 204 MTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRSKLMPINRAYKLPDLMEAIKYYVN 263
Query: 773 YSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKN 832
+ R ITFEY + G ND HA EL +L++ K C +NLIP N P + + +
Sbjct: 264 RTGRR-ITFEYGLFGGENDQVEHAEELAALLKGVK----CHVNLIPVNYVPERDYVRTPR 318
Query: 833 SRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEE 870
+I +F K L + G+ VTIR+ +G+DI+AACGQL +E
Sbjct: 319 EQIFLFEKTLKDRGVNVTIRREQGHDIDAACGQLRAKE 356
>UNIPROTKB|Q3AC22 [details] [associations]
symbol:rlmN "Probable dual-specificity RNA
methyltransferase RlmN" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0051539
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 HOGENOM:HOG000217991
KO:K06941 OMA:MACDFCA GO:GO:0070040 TIGRFAMs:TIGR00048
RefSeq:YP_360312.1 ProteinModelPortal:Q3AC22 STRING:Q3AC22
GeneID:3728344 KEGG:chy:CHY_1480 PATRIC:21276091
BioCyc:CHYD246194:GJCN-1479-MONOMER Uniprot:Q3AC22
Length = 342
Score = 592 (213.5 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 133/342 (38%), Positives = 205/342 (59%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
E E FR KQ+ +WI K G DFNKMT+L + LR+KLK + + + I+ + S DG
Sbjct: 18 ENNEKSFRLKQINEWIFKHGELDFNKMTNLPVRLREKLKENFLLPSLKIIHSKKSRDGQS 77
Query: 595 -KWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQ 652
K++ +K N+ IE V + + NT+C+STQVGC + C FC+TG GF RNLT GE+I Q
Sbjct: 78 IKYLLKLKDNLGIEAVLLKYRYGNTVCLSTQVGCKMGCKFCATGLGGFSRNLTAGEMIEQ 137
Query: 653 LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
+ V +K +S K IT +V+MG GEPL N+ + ++ I +S R
Sbjct: 138 ILV----------LKASSSEK--ITRVVLMGSGEPLDNFTEVLKFMRKINEKDCLNISYR 185
Query: 713 HVILSTSGIIPMIDKLAQE-CPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYI 771
+ +ST G++P I LA+E PV LA+SLHA ++ LRN+L+PI+K++ L EL+ A +I
Sbjct: 186 KITVSTCGMVPQIKALAEEKLPVTLAISLHAPDDALRNELIPINKRWGLAELLDAAWYFI 245
Query: 772 TYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSK 831
+ R ++FEY ++ +NDT HA++L L+++ + +NLIP+N N
Sbjct: 246 DKTGRR-VSFEYALIENVNDTVEHALKLAQLLQRKLV----HVNLIPYNTIEKRNFKTPS 300
Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDI 873
+I F ++L +GI VT+R+ G++I+ ACGQL + ++
Sbjct: 301 VEKINKFKEVLKRAGIPVTVRRELGDEIDGACGQLKAKYFEV 342
>TIGR_CMR|CHY_1480 [details] [associations]
symbol:CHY_1480 "radical SAM enzyme, Cfr family"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01849 InterPro:IPR004383
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051539 GO:GO:0008033 GO:GO:0001510
eggNOG:COG0820 HOGENOM:HOG000217991 KO:K06941 OMA:MACDFCA
GO:GO:0070040 TIGRFAMs:TIGR00048 RefSeq:YP_360312.1
ProteinModelPortal:Q3AC22 STRING:Q3AC22 GeneID:3728344
KEGG:chy:CHY_1480 PATRIC:21276091
BioCyc:CHYD246194:GJCN-1479-MONOMER Uniprot:Q3AC22
Length = 342
Score = 592 (213.5 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 133/342 (38%), Positives = 205/342 (59%)
Query: 535 ELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTR 594
E E FR KQ+ +WI K G DFNKMT+L + LR+KLK + + + I+ + S DG
Sbjct: 18 ENNEKSFRLKQINEWIFKHGELDFNKMTNLPVRLREKLKENFLLPSLKIIHSKKSRDGQS 77
Query: 595 -KWIFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQ 652
K++ +K N+ IE V + + NT+C+STQVGC + C FC+TG GF RNLT GE+I Q
Sbjct: 78 IKYLLKLKDNLGIEAVLLKYRYGNTVCLSTQVGCKMGCKFCATGLGGFSRNLTAGEMIEQ 137
Query: 653 LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
+ V +K +S K IT +V+MG GEPL N+ + ++ I +S R
Sbjct: 138 ILV----------LKASSSEK--ITRVVLMGSGEPLDNFTEVLKFMRKINEKDCLNISYR 185
Query: 713 HVILSTSGIIPMIDKLAQE-CPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYI 771
+ +ST G++P I LA+E PV LA+SLHA ++ LRN+L+PI+K++ L EL+ A +I
Sbjct: 186 KITVSTCGMVPQIKALAEEKLPVTLAISLHAPDDALRNELIPINKRWGLAELLDAAWYFI 245
Query: 772 TYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSK 831
+ R ++FEY ++ +NDT HA++L L+++ + +NLIP+N N
Sbjct: 246 DKTGRR-VSFEYALIENVNDTVEHALKLAQLLQRKLV----HVNLIPYNTIEKRNFKTPS 300
Query: 832 NSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDI 873
+I F ++L +GI VT+R+ G++I+ ACGQL + ++
Sbjct: 301 VEKINKFKEVLKRAGIPVTVRRELGDEIDGACGQLKAKYFEV 342
>UNIPROTKB|Q74E53 [details] [associations]
symbol:rlmN "Dual-specificity RNA methyltransferase RlmN"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 GO:GO:0070040
TIGRFAMs:TIGR00048 HOGENOM:HOG000217992 OMA:IYHFGVS
RefSeq:NP_952164.1 ProteinModelPortal:Q74E53 GeneID:2688552
KEGG:gsu:GSU1111 PATRIC:22024984 ProtClustDB:PRK14463
BioCyc:GSUL243231:GH27-1106-MONOMER Uniprot:Q74E53
Length = 360
Score = 586 (211.3 bits), Expect = 6.9e-56, P = 6.9e-56
Identities = 135/340 (39%), Positives = 202/340 (59%)
Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
G+ +RA+Q+ KW+++ G + F +MTDL+ LR+ L+ + I + +IS DGTRK+
Sbjct: 23 GKERYRARQIFKWLYQRGATSFAEMTDLAKELRRDLEETARISTLSPEALEISRDGTRKY 82
Query: 597 IFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
+F + +E+V IPE++RNTLCIS+QVGCA+ C FC TG RNLT EI+ Q+
Sbjct: 83 LFRLDDGCSVESVLIPEEDRNTLCISSQVGCAMACEFCLTGTFRLTRNLTTAEIVNQVCA 142
Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
+ +++ + NIV MGMGEPL N + I AL+++L D S R +
Sbjct: 143 VQ------RDVPVR--------NIVFMGMGEPLANLDNVIRALQIMLHDDGLQFSTRRIT 188
Query: 716 LSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSP 775
+ST+G++P +++L + V LAVSL+A+ + LR++++PI++KYPL L+ AC R+
Sbjct: 189 VSTAGLVPEMERLGRSVTVNLAVSLNATTDELRDRIMPINRKYPLAVLLDACRRF-PLPG 247
Query: 776 RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRI 835
R IT EY +L G+NDT A L+ L+ + S KINLIPFN + I
Sbjct: 248 RRKITIEYVLLGGVNDTLDDAKRLVRLLSD---IPS-KINLIPFNEHEGCSFRSPSQDAI 303
Query: 836 KIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
F + L++ V R RG DI+AACGQL G+ D +K
Sbjct: 304 DRFHRYLLDKHFTVITRSSRGADISAACGQLKGK-LDALK 342
>TIGR_CMR|BA_4633 [details] [associations]
symbol:BA_4633 "histidyl-tRNA synthetase" species:198094
"Bacillus anthracis str. Ames" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
RefSeq:NP_846850.1 RefSeq:YP_021280.1 RefSeq:YP_030546.1
ProteinModelPortal:Q81LI6 SMR:Q81LI6 DNASU:1085478
EnsemblBacteria:EBBACT00000013120 EnsemblBacteria:EBBACT00000017783
EnsemblBacteria:EBBACT00000019532 GeneID:1085478 GeneID:2814868
GeneID:2850534 KEGG:ban:BA_4633 KEGG:bar:GBAA_4633 KEGG:bat:BAS4298
HOGENOM:HOG000018072 OMA:NMFRYEE ProtClustDB:PRK00037
BioCyc:BANT260799:GJAJ-4354-MONOMER
BioCyc:BANT261594:GJ7F-4503-MONOMER Uniprot:Q81LI6
Length = 423
Score = 586 (211.3 bits), Expect = 6.9e-56, P = 6.9e-56
Identities = 131/324 (40%), Positives = 196/324 (60%)
Query: 868 GEETDIVKKEMYSFIDELNGD-NLSLRPEGTASVIRSVIENNLIYDG--PKRLWYSGPMF 924
G+ TDIV+KEMYSF D G+ +L+LRPEGTA V+RS +EN + D P +L+Y G MF
Sbjct: 55 GDTTDIVQKEMYSFQDR--GERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMF 112
Query: 925 RHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNE 984
R+ERPQ GRYRQF Q G+EAIG P IDAE+I + ++ + LKNI + LNS+G+
Sbjct: 113 RYERPQAGRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLGDAAS 172
Query: 985 RKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEK 1044
R+ + LI + + FC D + L N LR+LD K E++ AP + +YL +
Sbjct: 173 RQAHRDALIAHFEPRIGE--FCSDCQSRLEKNPLRILDCKKDRNHELMGTAPSITEYLNE 230
Query: 1045 DSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDK--LGSQNSICGGGRYD 1102
DS ++ +Q++L ++ ++ + LVRG+DYY TVFE ++ G+ ++ GGGRY+
Sbjct: 231 DSAVYYDKVQELLTMMDVPFEKDPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYN 290
Query: 1103 FLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSE 1162
L+++ +P GFA+ IERLI +K NI H D Y+V +G++A+ A ++
Sbjct: 291 GLVQEIGGPEMPGIGFAMSIERLIMALKAENIELPIEHSIDCYVVALGEKAKDHAAKVAF 350
Query: 1163 NLRTLGLKVILNCVFNNIHESFKS 1186
+LR GL V + + + FKS
Sbjct: 351 DLRKAGLAVEKDYLDRKMKAQFKS 374
>TIGR_CMR|GSU_1111 [details] [associations]
symbol:GSU_1111 "conserved hypothetical protein TIGR00048"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 KO:K06941 GO:GO:0070040
TIGRFAMs:TIGR00048 HOGENOM:HOG000217992 OMA:IYHFGVS
RefSeq:NP_952164.1 ProteinModelPortal:Q74E53 GeneID:2688552
KEGG:gsu:GSU1111 PATRIC:22024984 ProtClustDB:PRK14463
BioCyc:GSUL243231:GH27-1106-MONOMER Uniprot:Q74E53
Length = 360
Score = 586 (211.3 bits), Expect = 6.9e-56, P = 6.9e-56
Identities = 135/340 (39%), Positives = 202/340 (59%)
Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
G+ +RA+Q+ KW+++ G + F +MTDL+ LR+ L+ + I + +IS DGTRK+
Sbjct: 23 GKERYRARQIFKWLYQRGATSFAEMTDLAKELRRDLEETARISTLSPEALEISRDGTRKY 82
Query: 597 IFHVKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
+F + +E+V IPE++RNTLCIS+QVGCA+ C FC TG RNLT EI+ Q+
Sbjct: 83 LFRLDDGCSVESVLIPEEDRNTLCISSQVGCAMACEFCLTGTFRLTRNLTTAEIVNQVCA 142
Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
+ +++ + NIV MGMGEPL N + I AL+++L D S R +
Sbjct: 143 VQ------RDVPVR--------NIVFMGMGEPLANLDNVIRALQIMLHDDGLQFSTRRIT 188
Query: 716 LSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSP 775
+ST+G++P +++L + V LAVSL+A+ + LR++++PI++KYPL L+ AC R+
Sbjct: 189 VSTAGLVPEMERLGRSVTVNLAVSLNATTDELRDRIMPINRKYPLAVLLDACRRF-PLPG 247
Query: 776 RHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSRI 835
R IT EY +L G+NDT A L+ L+ + S KINLIPFN + I
Sbjct: 248 RRKITIEYVLLGGVNDTLDDAKRLVRLLSD---IPS-KINLIPFNEHEGCSFRSPSQDAI 303
Query: 836 KIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVK 875
F + L++ V R RG DI+AACGQL G+ D +K
Sbjct: 304 DRFHRYLLDKHFTVITRSSRGADISAACGQLKGK-LDALK 342
>TIGR_CMR|CHY_2205 [details] [associations]
symbol:CHY_2205 "histidyl-tRNA synthetase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=ISS] InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 PIRSF:PIRSF001549
PROSITE:PS50862 InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 HOGENOM:HOG000018072 OMA:NMFRYEE
RefSeq:YP_361018.1 HSSP:Q02147 ProteinModelPortal:Q3AA16
STRING:Q3AA16 GeneID:3727182 KEGG:chy:CHY_2205 PATRIC:21277477
BioCyc:CHYD246194:GJCN-2204-MONOMER Uniprot:Q3AA16
Length = 423
Score = 579 (208.9 bits), Expect = 3.9e-55, P = 3.9e-55
Identities = 132/323 (40%), Positives = 197/323 (60%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYD-GPKRLWYSGPMFRH 926
GE TDIV+KEMY+F+D+ G +++LRPEGTA+VIR+ +E D GP + +Y GPMFR+
Sbjct: 55 GETTDIVEKEMYTFLDKA-GRSITLRPEGTAAVIRAYVEAKKYADPGPAKYFYIGPMFRY 113
Query: 927 ERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERK 986
++PQ GR RQF+Q+GVE +G P +DAE+I+M ++ + L ++ L LNS+G RK
Sbjct: 114 DKPQAGRLRQFHQLGVEILGSDEPMVDAEVILMALEFYREIGLNDVELRLNSVGCPECRK 173
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
LINY ++ K+ C+ K L N LR+LD KN ++I NAP L L D
Sbjct: 174 SLREKLINYFEERKEE--LCDLCKARLNRNPLRILDCKNESCQKIAQNAPTPLSELCPDC 231
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
+HF ++K L+ + Y I+ LVRG+DYY +T FE+ ++G+Q+SI GGGRY+ LI+
Sbjct: 232 REHFTEVRKYLDLAQVKYVIDPFLVRGLDYYTKTAFEFVVPEIGAQSSIGGGGRYNGLIR 291
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
+ P GFA+G ER I +K+ + + D+++ +G+EA F L LR
Sbjct: 292 EIGGPDQPGIGFALGEERTILALKRKSEEISVPVP-DLFVCLLGEEAREYGFPLINELRR 350
Query: 1167 LGLKVILNCVFNNIHESFKSQMK 1189
L L V + + +S K+Q+K
Sbjct: 351 LNLWVETD--YQG--KSLKAQLK 369
>UNIPROTKB|Q2GGW4 [details] [associations]
symbol:engA "GTPase Der" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 562 (202.9 bits), Expect = 2.6e-53, P = 2.6e-53
Identities = 153/436 (35%), Positives = 231/436 (52%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VG PNVGKST+FNRLT+ + A+V+N P LTRDR G+ + F I+DTGG + +
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDNTI 63
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLI--TNFLRKS-GQPIVLVXXXX 121
K + + Q K + VD R + DK I +LRK +PI+L+
Sbjct: 64 KLSSL--VLDQVKLSIEESDIIFFVVDAR--IEHDDKNIEFAKYLRKKVKKPIILIANKC 119
Query: 122 XXXXXXXXLDF--YELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+D+ Y IG P ISA + G+ + E +L P F K+ + +
Sbjct: 120 ESQKRCYSIDYLGYFDFIG-PVYISAEHNLGLVDLYEALL----P---FIKEYDLNTL-D 170
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK++IVG+PN GKST IN LL ENR+I PGTTRDSI + Y +K+ LIDTAG
Sbjct: 171 LHNIKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K E IE SV KT++SI +++VIL++D+ I QD++IA + G+++I+
Sbjct: 231 MRKKAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKAIIIA 290
Query: 300 VNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNF-ISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD L+F + +SA+K N N +E+ +Y +
Sbjct: 291 LNKWDMIAKKDRSELLKDICNYNK-LNFKVPVIEVSALKNINCNKIIETSIELYKCLTMR 349
Query: 359 LSTSRITRALISAIKNH-PP-CRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+STS + + L A++ H PP C K++ K++Y Q PP + N I Y++
Sbjct: 350 ISTSVLNKWLKLAVEYHKPPLCNGKVV--KIKYITQVKVIPPTFIAVVNGSYSIDLTYRQ 407
Query: 417 YLEKYFYRTFSLIDAL 432
YL + FS ID +
Sbjct: 408 YLMSSLRKHFS-IDGI 422
Score = 146 (56.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+K+AIVG PNVGKST+ N L + I + P TRD + + K+ ++DT G+
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV-N 301
K ++ +K SI E++++ ++DA+ ++I A ++ + + I+ + N
Sbjct: 62 TIKLSSLV--LDQVKL--SIEESDIIFFVVDARIEHDDKNIEFAKYLRKKVKKPIILIAN 117
Query: 302 KWDS 305
K +S
Sbjct: 118 KCES 121
Score = 49 (22.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 1013 LYLNSLRVLDSKNLIIREILINAPK-LLDYLEK-DSL---DHFYGIQKILNYNNISYKI 1066
L ++S+ ++ ++L I E+ I K ++ L K D + D ++ I NYN +++K+
Sbjct: 261 LMIDSVYGIEQQDLSIAELAIQKGKAIIIALNKWDMIAKKDRSELLKDICNYNKLNFKV 319
>TIGR_CMR|ECH_0504 [details] [associations]
symbol:ECH_0504 "GTP-binding protein EngA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 562 (202.9 bits), Expect = 2.6e-53, P = 2.6e-53
Identities = 153/436 (35%), Positives = 231/436 (52%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VG PNVGKST+FNRLT+ + A+V+N P LTRDR G+ + F I+DTGG + +
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDNTI 63
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLI--TNFLRKS-GQPIVLVXXXX 121
K + + Q K + VD R + DK I +LRK +PI+L+
Sbjct: 64 KLSSL--VLDQVKLSIEESDIIFFVVDAR--IEHDDKNIEFAKYLRKKVKKPIILIANKC 119
Query: 122 XXXXXXXXLDF--YELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+D+ Y IG P ISA + G+ + E +L P F K+ + +
Sbjct: 120 ESQKRCYSIDYLGYFDFIG-PVYISAEHNLGLVDLYEALL----P---FIKEYDLNTL-D 170
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK++IVG+PN GKST IN LL ENR+I PGTTRDSI + Y +K+ LIDTAG
Sbjct: 171 LHNIKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K E IE SV KT++SI +++VIL++D+ I QD++IA + G+++I+
Sbjct: 231 MRKKAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKAIIIA 290
Query: 300 VNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNF-ISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD L+F + +SA+K N N +E+ +Y +
Sbjct: 291 LNKWDMIAKKDRSELLKDICNYNK-LNFKVPVIEVSALKNINCNKIIETSIELYKCLTMR 349
Query: 359 LSTSRITRALISAIKNH-PP-CRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+STS + + L A++ H PP C K++ K++Y Q PP + N I Y++
Sbjct: 350 ISTSVLNKWLKLAVEYHKPPLCNGKVV--KIKYITQVKVIPPTFIAVVNGSYSIDLTYRQ 407
Query: 417 YLEKYFYRTFSLIDAL 432
YL + FS ID +
Sbjct: 408 YLMSSLRKHFS-IDGI 422
Score = 146 (56.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+K+AIVG PNVGKST+ N L + I + P TRD + + K+ ++DT G+
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV-N 301
K ++ +K SI E++++ ++DA+ ++I A ++ + + I+ + N
Sbjct: 62 TIKLSSLV--LDQVKL--SIEESDIIFFVVDARIEHDDKNIEFAKYLRKKVKKPIILIAN 117
Query: 302 KWDS 305
K +S
Sbjct: 118 KCES 121
Score = 49 (22.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 1013 LYLNSLRVLDSKNLIIREILINAPK-LLDYLEK-DSL---DHFYGIQKILNYNNISYKI 1066
L ++S+ ++ ++L I E+ I K ++ L K D + D ++ I NYN +++K+
Sbjct: 261 LMIDSVYGIEQQDLSIAELAIQKGKAIIIALNKWDMIAKKDRSELLKDICNYNKLNFKV 319
>TIGR_CMR|ECH_0291 [details] [associations]
symbol:ECH_0291 "histidyl-tRNA synthetase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004821 "histidine-tRNA
ligase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018072 OMA:NMFRYEE ProtClustDB:PRK00037
RefSeq:YP_507112.1 ProteinModelPortal:Q2GHH1 STRING:Q2GHH1
GeneID:3927256 KEGG:ech:ECH_0291 PATRIC:20576087
BioCyc:ECHA205920:GJNR-291-MONOMER Uniprot:Q2GHH1
Length = 413
Score = 559 (201.8 bits), Expect = 5.5e-53, P = 5.5e-53
Identities = 130/321 (40%), Positives = 190/321 (59%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
G+++DIV KEMY+F D+ +G+N++LRPE T++++R +I NLI P +L+ SGP+FR+E
Sbjct: 58 GDDSDIVMKEMYNFQDK-SGENITLRPEFTSAIVRVLINKNLII--PVKLFSSGPVFRYE 114
Query: 928 RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERK 986
RPQ R RQF+Q+ E G P D E+I + + L L +I LE+N +G+
Sbjct: 115 RPQKCRQRQFHQVNFEFFGSDLPLADIEMIALGYHILDELKLLDDITLEINFLGDKETMN 174
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
Y + LI Y+ K+K K ED + L N LR+LDSK REIL+N P + + K S
Sbjct: 175 SYKLSLIEYLNKYK--KDLSEDSQRRLITNPLRILDSKAPEDREILLNVPNISYFYSKSS 232
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
D F + L+ I YK+N +VRG+DYY TVFE+TT KLG+QN++ GGRYD L+K
Sbjct: 233 NDFFAEVLYGLDELCIPYKVNHSIVRGLDYYCNTVFEFTTSKLGAQNAVVAGGRYDGLVK 292
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENL 1164
PA GFA+G+ER+ LI ++ HQ + ++ +GK+A A L+ L
Sbjct: 293 SMGGNDTPAVGFAMGVERVSALI-------DYKHQEPRSVVLIPIGKDAVSYALKLAYEL 345
Query: 1165 RTLGLKVILNCVFNNIHESFK 1185
R G+ V N N+ + +
Sbjct: 346 RCNGISVNWNYKNANLRNALR 366
>UNIPROTKB|P67483 [details] [associations]
symbol:hisS "Histidine--tRNA ligase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 HOGENOM:HOG000018072 ProtClustDB:PRK00037
OMA:CGGGNFK PIR:C70725 RefSeq:NP_217096.1 RefSeq:NP_337156.1
RefSeq:YP_006516021.1 ProteinModelPortal:P67483 SMR:P67483
PRIDE:P67483 EnsemblBacteria:EBMYCT00000000105
EnsemblBacteria:EBMYCT00000072427 GeneID:13319300 GeneID:887479
GeneID:925650 KEGG:mtc:MT2657 KEGG:mtu:Rv2580c KEGG:mtv:RVBD_2580c
PATRIC:18127588 TubercuList:Rv2580c Uniprot:P67483
Length = 423
Score = 557 (201.1 bits), Expect = 9.0e-53, P = 9.0e-53
Identities = 125/308 (40%), Positives = 187/308 (60%)
Query: 868 GEETDIVKKEMYSFIDELNGD-NLSLRPEGTASVIRSVIENNLIYDG-PKRLWYSGPMFR 925
GE TD+V KEMY+F D GD +++LRPEGTA V+R+VIE+ L P +L Y+GP FR
Sbjct: 59 GESTDVVSKEMYTFADR--GDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFR 116
Query: 926 HERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNER 985
+ERPQ GRYRQ Q+GVEAIG P +DAE+I + +++L L LE+ S+G+ + R
Sbjct: 117 YERPQAGRYRQLQQVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDESCR 176
Query: 986 KKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKD 1045
+Y +L+ D ED + +N LRVLD K +R + +AP LLD+L
Sbjct: 177 PQYR-ELLQEFLFGLDLD---EDTRRRAGINPLRVLDDKRPELRAMTASAPVLLDHLSDV 232
Query: 1046 SLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLI 1105
+ HF + L+ + Y IN ++VRG+DYY +T FE+ D LG+Q+ I GGGRYD L+
Sbjct: 233 AKQHFDTVLAHLDALGVPYVINPRMVRGLDYYTKTAFEFVHDGLGAQSGIGGGGRYDGLM 292
Query: 1106 KKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLR 1165
+ + + GF +G++R + ++ S +CD++ V +G+ A+L+ VL+ LR
Sbjct: 293 HQLGGQDLSGIGFGLGVDRTVLALRAEGKTAGDSARCDVFGVPLGEAAKLRLAVLAGRLR 352
Query: 1166 TLGLKVIL 1173
G++V L
Sbjct: 353 AAGVRVDL 360
>TIGR_CMR|DET_0006 [details] [associations]
symbol:DET_0006 "histidyl-tRNA synthetase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004821 "histidine-tRNA
ligase activity" evidence=ISS] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:CP000027 GenomeReviews:CP000027_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018072 ProtClustDB:PRK00037 OMA:CGGGNFK
RefSeq:YP_180761.1 ProteinModelPortal:Q3ZAI8 STRING:Q3ZAI8
GeneID:3229137 KEGG:det:DET0006 PATRIC:21607117
BioCyc:DETH243164:GJNF-6-MONOMER Uniprot:Q3ZAI8
Length = 418
Score = 550 (198.7 bits), Expect = 5.1e-52, P = 5.1e-52
Identities = 128/324 (39%), Positives = 189/324 (58%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNL-IYDGPKRLWYSGPMFRH 926
GE TDIV KEMY+F D GD L+LRPEGTA + R+ +E+ + P +L+Y +FR+
Sbjct: 54 GEGTDIVSKEMYTFEDR-GGDKLTLRPEGTAPICRAYLEHGMQTRTKPVKLYYLSSIFRY 112
Query: 927 ERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERK 986
+RPQ GRYRQ +Q G EAIG +DAE+I M R + L + ++ LELNSIG R
Sbjct: 113 DRPQAGRYRQHHQFGFEAIGEADASLDAEVIEMAWRFYNLLGINDLSLELNSIGCRECRP 172
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
Y L Y +H+ C D K L N+LR+LD K + + NAP+ DYL D
Sbjct: 173 AYISALKAYYGQHEGK--LCSDCKTRLDKNTLRLLDCKREECQCVAENAPRSADYLCPDC 230
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
L H+ +++ L ++ + N +LVRG+DYY+RTVFE G+Q++I GGGRYD LI+
Sbjct: 231 LAHYNRLKECLTVVDLPFHENFRLVRGLDYYSRTVFEIQPRIEGAQSTIGGGGRYDGLIE 290
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
+ + PA GFA GIER+I +K+ I +++ ++G+ A L + L+ +LR
Sbjct: 291 QLGGEPTPAIGFATGIERIILNLKRQGITPPPLPSPSVFLAYMGEAASLASIALASDLRK 350
Query: 1167 LGLKVILNCVFNNIHESFKSQMKR 1190
G+ + +S K+Q+++
Sbjct: 351 AGIGIYQTYA----QKSIKAQLRQ 370
>UNIPROTKB|P64057 [details] [associations]
symbol:der "GTPase Der" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0042254 EMBL:BX842577 GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:H70504 RefSeq:NP_216229.1 RefSeq:NP_336210.1
RefSeq:YP_006515108.1 ProteinModelPortal:P64057 SMR:P64057
PRIDE:P64057 EnsemblBacteria:EBMYCT00000000320
EnsemblBacteria:EBMYCT00000071863 GeneID:13316498 GeneID:885086
GeneID:923951 KEGG:mtc:MT1753 KEGG:mtu:Rv1713 KEGG:mtv:RVBD_1713
PATRIC:18125608 TubercuList:Rv1713 OMA:NCFLVIN ProtClustDB:PRK03003
Uniprot:P64057
Length = 463
Score = 527 (190.6 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 132/426 (30%), Positives = 211/426 (49%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRH-YGEGYIGKKSFIIIDTGGFE 61
PV+ +VGRPNVGKSTL NR+ R+A+V + PG+TRDR Y + G++ F++ DTGG+E
Sbjct: 27 PVVAVVGRPNVGKSTLVNRILGRREAVVQDIPGVTRDRVCYDALWTGRR-FVVQDTGGWE 85
Query: 62 PEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXX 121
P K G+ + +Q A VD G D+ L +SG+P+ L
Sbjct: 86 PNAK-GLQRLVAEQASVAMRTADAVILVVDAGVGATAADEAAARILLRSGKPVFLAANKV 144
Query: 122 XXXXXXX-XLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ LG+G PH ISA++G G+ + L+ +L LP + E +
Sbjct: 145 DSEKGESDAAALWSLGLGEPHAISAMHGRGVADLLDGVLAA-LP-----EVGESASASGG 198
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+VA+VGKPNVGKS+L+N L G+ R + ++ GTT D + SL E + +DTAG+
Sbjct: 199 PR-RVALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIELGGDVWRFVDTAGL 257
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ E ++ ++T +I A V I+L+DA Q ++ QD+ + + + E+GR+L++
Sbjct: 258 RRKVGQASGHEFYASVRTHAAIDSAEVAIVLIDASQPLTEQDLRVISMVIEAGRALVLAY 317
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD + +A ISA ++ + ++ S ++
Sbjct: 318 NKWDLVDEDRRELLQREIDRELVQVRWAQRVNISAKTGRAVHKLVPAMEDALASWDTRIA 377
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK 420
T + L PP + +P++ +A Q PP V+ G Y+R+LE+
Sbjct: 378 TGPLNTWLTEVTAATPPPVRGGKQPRILFATQATARPPTFVLFTTGFLEAG--YRRFLER 435
Query: 421 YFYRTF 426
TF
Sbjct: 436 RLRETF 441
>TIGR_CMR|CJE_0856 [details] [associations]
symbol:CJE_0856 "histidyl-tRNA synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:CP000025 GenomeReviews:CP000025_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018072 ProtClustDB:PRK00037 OMA:CGGGNFK
RefSeq:YP_178858.1 ProteinModelPortal:Q5HV27 STRING:Q5HV27
GeneID:3231369 KEGG:cjr:CJE0856 PATRIC:20043479
BioCyc:CJEJ195099:GJC0-876-MONOMER Uniprot:Q5HV27
Length = 408
Score = 526 (190.2 bits), Expect = 1.9e-49, P = 1.9e-49
Identities = 133/325 (40%), Positives = 193/325 (59%)
Query: 868 GEETDIVKKEMYSFIDELNGDN-LSLRPEGTASVIRSVIENNLIYD-GPKRLWYSGPMFR 925
GE +DIV KEMY FID+ G+N + +RPEGTA V+R+ IE L + KR +Y G MFR
Sbjct: 54 GESSDIVGKEMYEFIDK--GENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYYGSMFR 111
Query: 926 HERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNER 985
+ERPQ GR R+F+Q GVE++G P DA +I+M ++ L + + L+LNS+G
Sbjct: 112 YERPQKGRLREFHQFGVESLGIPNVYEDASIILMLVEIFSRLGI-DFKLQLNSLGCSQCL 170
Query: 986 KKYCIDLINYIKKHKDSK-WFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEK 1044
KY L+ ++ DSK FCED LN +RVLD KN + +L NAP L++ L
Sbjct: 171 PKYRDRLVEFL----DSKEGFCEDCLRRKNLNPIRVLDCKNEHCQNLLENAPLLINNLCT 226
Query: 1045 DSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFL 1104
F +Q+IL N + +++++KLVRG+DYY++T FE+ +D++G++ +I GGGRYD L
Sbjct: 227 SCQKDFETLQQILKDNGVKFELDSKLVRGLDYYSKTAFEFISDEIGAKAAIAGGGRYDRL 286
Query: 1105 IKKFSNKFVPASGFAIGIERLIELI--KKININHNFSHQC---DIYI---VHVGKEA--E 1154
I+ K GFA+GIER+I ++ K+ I + C +IYI +H+ E
Sbjct: 287 IEYLGGKSGYGIGFAMGIERIITILEQKEEKIQREGIYLCAMDEIYIQKLLHIATNLRKE 346
Query: 1155 LKAFVLSENLRTLGLKVILNCVFNN 1179
K +LS R L K + N NN
Sbjct: 347 YKV-LLSYEARKLA-KHLENADKNN 369
>TIGR_CMR|NSE_0781 [details] [associations]
symbol:NSE_0781 "histidyl-tRNA synthetase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004821 "histidine-tRNA
ligase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:CP000237 GenomeReviews:CP000237_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018072 OMA:CGGGNFK RefSeq:YP_506656.1
ProteinModelPortal:Q2GCZ0 STRING:Q2GCZ0 GeneID:3931975
KEGG:nse:NSE_0781 PATRIC:22681557 ProtClustDB:CLSK2527712
BioCyc:NSEN222891:GHFU-792-MONOMER Uniprot:Q2GCZ0
Length = 413
Score = 525 (189.9 bits), Expect = 2.4e-49, P = 2.4e-49
Identities = 128/324 (39%), Positives = 193/324 (59%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE +D+V KE+YSF D+ +G N+ LRPE TA+V R+ +EN P RL+ GP+FR+E
Sbjct: 57 GETSDVVNKEIYSFQDK-SGHNICLRPEFTAAVTRAFVENFQHIQSPVRLFSFGPLFRYE 115
Query: 928 RPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNIC-LELNSIGNFNERK 986
RPQ GRYRQF+Q+ E IG E I++ K + ++ C + +NS+G R+
Sbjct: 116 RPQKGRYRQFHQVNFEWIGAKHYLWAVEAIVLAKSFLKEIGIR--CEIRVNSLGCSRTRE 173
Query: 987 KYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDS 1046
+Y + LINY +++K+ D L N LR+LDSK+ +EI++ AP++LDY D+
Sbjct: 174 EYKLALINYFQQYKEH--LSADSLLRLKKNPLRILDSKDPSEKEIVVGAPRILDYHTDDA 231
Query: 1047 LDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIK 1106
L F I IL +I + ++ +LVRG+DYY+ +FE+T+ LG+Q+++ GGG Y+ L +
Sbjct: 232 LKEFESICDILKLLDIEFSVDHRLVRGLDYYSGLIFEFTSPDLGAQDALLGGGAYEQLSE 291
Query: 1107 KFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRT 1166
K V + GFA GIERLI+++ + S + + IV +G+ AE +A L LR+
Sbjct: 292 NLGGKKVQSIGFAAGIERLIDIMPVLAPT---SDKI-VSIVPIGEIAEREALKLLFYLRS 347
Query: 1167 LGLKVILNCVFNNIHESFKSQMKR 1190
GL C S KS+MKR
Sbjct: 348 EGL-----CADMCYGLSVKSRMKR 366
>UNIPROTKB|Q2GKV6 [details] [associations]
symbol:der "GTPase Der" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 516 (186.7 bits), Expect = 2.2e-48, P = 2.2e-48
Identities = 138/429 (32%), Positives = 219/429 (51%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYG-EGYIGKKSFIIIDTGGFEPE 63
+ +VG PNVGKSTLFNRLT + A+V++ +TRDR + G + FI IDTGG
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLR-FIAIDTGGV--- 59
Query: 64 VKKGIMHEMTK-QTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK-SGQPIVLVXXXX 121
G + + K Q + A +D ++ + +L K + +PI+LV
Sbjct: 60 ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIILVANKC 119
Query: 122 XXXXXXXXLDFYE-LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+D E LG P ISA + G+ + E I + ++ E
Sbjct: 120 ESNKNNVHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPL-------IEQSERPKKDQD 172
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I ++I+G+PNVGKST +NS+LGE RVIT GTTRDSI + + Y +L DTAGI
Sbjct: 173 RPIAISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAEYSYKGITLLLTDTAGI 232
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K E +EK SV + ++ +++VVIL++D Q IS QD++IA+ + G+ +++ +
Sbjct: 233 RKRTKVTENMEKLSVQSAIHALSKSHVVILIVDFTQGISQQDLSIASTAIKDGKGIVLAL 292
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAM-FNFISAIKLNNINSFMESINHVYDSSIIHL 359
NK D + F + +SA++ + + +Y+S+ H+
Sbjct: 293 NKADLVNDKAAEDAILNAIRQYSRVDFDVPIMKMSALENIGCDKVLSKAVKIYESASTHI 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS++ + L +AI HPP + + +L+Y Q PP VI N + + + Y+ YL+
Sbjct: 353 STSKLNKWLGTAIDYHPPHLQNKKKVRLKYISQVSTLPPTFVIATNSTE-VESTYQTYLK 411
Query: 420 KYFYRTFSL 428
F + FS+
Sbjct: 412 NSFLKHFSM 420
Score = 158 (60.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 43/125 (34%), Positives = 72/125 (57%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
KVAIVG PNVGKSTL N L I D TRD ++L ++ ++I IDT G+
Sbjct: 3 KVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADG 62
Query: 244 NKTFEVIEKFSVIKT-LKSILE-ANVVILLLDAQQNISAQDINIANFIYE-SGRSLIVCV 300
+ I+ S++KT ++ LE A+VV+ ++DAQ+ + ++ ++ + + + +I+
Sbjct: 63 GE----IQ--SLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIILVA 116
Query: 301 NKWDS 305
NK +S
Sbjct: 117 NKCES 121
>TIGR_CMR|APH_0390 [details] [associations]
symbol:APH_0390 "putative GTP-binding protein EngA"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 516 (186.7 bits), Expect = 2.2e-48, P = 2.2e-48
Identities = 138/429 (32%), Positives = 219/429 (51%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYG-EGYIGKKSFIIIDTGGFEPE 63
+ +VG PNVGKSTLFNRLT + A+V++ +TRDR + G + FI IDTGG
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLR-FIAIDTGGV--- 59
Query: 64 VKKGIMHEMTK-QTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK-SGQPIVLVXXXX 121
G + + K Q + A +D ++ + +L K + +PI+LV
Sbjct: 60 ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIILVANKC 119
Query: 122 XXXXXXXXLDFYE-LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+D E LG P ISA + G+ + E I + ++ E
Sbjct: 120 ESNKNNVHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPL-------IEQSERPKKDQD 172
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I ++I+G+PNVGKST +NS+LGE RVIT GTTRDSI + + Y +L DTAGI
Sbjct: 173 RPIAISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAEYSYKGITLLLTDTAGI 232
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K E +EK SV + ++ +++VVIL++D Q IS QD++IA+ + G+ +++ +
Sbjct: 233 RKRTKVTENMEKLSVQSAIHALSKSHVVILIVDFTQGISQQDLSIASTAIKDGKGIVLAL 292
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAM-FNFISAIKLNNINSFMESINHVYDSSIIHL 359
NK D + F + +SA++ + + +Y+S+ H+
Sbjct: 293 NKADLVNDKAAEDAILNAIRQYSRVDFDVPIMKMSALENIGCDKVLSKAVKIYESASTHI 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS++ + L +AI HPP + + +L+Y Q PP VI N + + + Y+ YL+
Sbjct: 353 STSKLNKWLGTAIDYHPPHLQNKKKVRLKYISQVSTLPPTFVIATNSTE-VESTYQTYLK 411
Query: 420 KYFYRTFSL 428
F + FS+
Sbjct: 412 NSFLKHFSM 420
Score = 158 (60.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 43/125 (34%), Positives = 72/125 (57%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
KVAIVG PNVGKSTL N L I D TRD ++L ++ ++I IDT G+
Sbjct: 3 KVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADG 62
Query: 244 NKTFEVIEKFSVIKT-LKSILE-ANVVILLLDAQQNISAQDINIANFIYE-SGRSLIVCV 300
+ I+ S++KT ++ LE A+VV+ ++DAQ+ + ++ ++ + + + +I+
Sbjct: 63 GE----IQ--SLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIILVA 116
Query: 301 NKWDS 305
NK +S
Sbjct: 117 NKCES 121
>TIGR_CMR|APH_0120 [details] [associations]
symbol:APH_0120 "histidyl-tRNA synthetase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006427 "histidyl-tRNA aminoacylation" evidence=ISS]
InterPro:IPR004516 InterPro:IPR006195 InterPro:IPR015807
PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154 HAMAP:MF_00127
GO:GO:0005524 GO:GO:0005737 EMBL:CP000235 GenomeReviews:CP000235_GR
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 HOGENOM:HOG000018072 OMA:NMFRYEE
ProtClustDB:PRK00037 RefSeq:YP_504747.1 ProteinModelPortal:Q2GLK4
STRING:Q2GLK4 GeneID:3930760 KEGG:aph:APH_0120 PATRIC:20948812
BioCyc:APHA212042:GHPM-155-MONOMER Uniprot:Q2GLK4
Length = 420
Score = 516 (186.7 bits), Expect = 2.2e-48, P = 2.2e-48
Identities = 121/317 (38%), Positives = 186/317 (58%)
Query: 863 CGQLSGEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGP 922
C L G+ TD++ KEMY+F D GD L+LRPE TA+++R ++ + P RL+ +GP
Sbjct: 54 CKTL-GDSTDVIGKEMYTFADR-GGDVLALRPEFTAAIVRLLLSEKM--QPPARLFTAGP 109
Query: 923 MFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLK-NICLELNSIGN 981
+FR+ERPQ R RQF+QI E G G DAE+I + + + L ++ LE+NS+G+
Sbjct: 110 VFRYERPQKCRQRQFHQINYECFGAGGSQADAEIISLAYCVLEVFGLHCDVTLEINSLGS 169
Query: 982 FNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDY 1041
Y L+++ +K++ ED + L N LR+LDSK+ +EIL AP + D+
Sbjct: 170 SECMNAYRASLLSFFEKYRSE--LSEDSRRRLQTNPLRILDSKDATDKEILSTAPSIEDF 227
Query: 1042 LEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRY 1101
+ ++ F G++ L I Y +N +LVRG+DYY TVFE+ T LG+Q++I GGRY
Sbjct: 228 YDAETRASFEGLKDHLTNLGIPYAVNRRLVRGLDYYTGTVFEYKTSSLGAQDAIIAGGRY 287
Query: 1102 DFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLS 1161
D L+ + VPA GFA G+ERL L+ + F C ++I+ + +E A ++
Sbjct: 288 DNLVAAMGGENVPAIGFAGGVERLAALMS-YSRTRKF---C-VFILPISEEVVSHAMRIT 342
Query: 1162 ENLR-TL-GLKVILNCV 1176
+R TL G++VI + V
Sbjct: 343 YEIRRTLSGVQVICDIV 359
>UNIPROTKB|Q5LR04 [details] [associations]
symbol:der "GTPase Der" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 325 (119.5 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 79/238 (33%), Positives = 122/238 (51%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++VA+VG+PN GKSTLIN +LGE+R++T G TRD+I ++N+ + DTAG+R+
Sbjct: 203 LQVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRK 262
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
+ K E +EK SV L+++ A VV++LLDA QD+ IA+ GR++++ VNK
Sbjct: 263 KAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAVNK 322
Query: 303 WDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
WD L A +SA + ++I ++ +
Sbjct: 323 WDVEENKQDKLRELKESFERLLPQLRGAPLVTVSAKTGRGLERLHDAILRAHEVWNRRIP 382
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T+ + R LI ++ HPP + R KLRY Q PP V+ + + Y RYL
Sbjct: 383 TAALNRWLIGMLEQHPPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPESYSRYL 440
Score = 248 (92.4 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 56/160 (35%), Positives = 81/160 (50%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M L +VGRPNVGKSTLFNRL R ALV + PG+TRD G+ +G F +IDT G
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
E + M + T++A +D R G+ D++ + LR+ ++L
Sbjct: 61 ETATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANK 120
Query: 121 XXXXXXXXX-LDFYELGIGNPHIISALYGNGIKNFLENIL 159
++ Y LG+G P +SA +G G+ N L +L
Sbjct: 121 AEGAAADAGVIEAYGLGLGEPIRLSAEHGEGL-NELYAVL 159
Score = 160 (61.4 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ +AIVG+PNVGKSTL N L+G+ + D PG TRD + + ++ +IDTAG+
Sbjct: 3 LTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGLE- 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
T + ++ T +++ A++ + ++DA+ ++ D A+ + +I+ NK
Sbjct: 62 -TATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANK 120
>TIGR_CMR|SPO_2328 [details] [associations]
symbol:SPO_2328 "GTP-binding protein EngA" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 325 (119.5 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 79/238 (33%), Positives = 122/238 (51%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++VA+VG+PN GKSTLIN +LGE+R++T G TRD+I ++N+ + DTAG+R+
Sbjct: 203 LQVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRK 262
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
+ K E +EK SV L+++ A VV++LLDA QD+ IA+ GR++++ VNK
Sbjct: 263 KAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAVNK 322
Query: 303 WDSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
WD L A +SA + ++I ++ +
Sbjct: 323 WDVEENKQDKLRELKESFERLLPQLRGAPLVTVSAKTGRGLERLHDAILRAHEVWNRRIP 382
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T+ + R LI ++ HPP + R KLRY Q PP V+ + + Y RYL
Sbjct: 383 TAALNRWLIGMLEQHPPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPESYSRYL 440
Score = 248 (92.4 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 56/160 (35%), Positives = 81/160 (50%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M L +VGRPNVGKSTLFNRL R ALV + PG+TRD G+ +G F +IDT G
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXX 120
E + M + T++A +D R G+ D++ + LR+ ++L
Sbjct: 61 ETATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANK 120
Query: 121 XXXXXXXXX-LDFYELGIGNPHIISALYGNGIKNFLENIL 159
++ Y LG+G P +SA +G G+ N L +L
Sbjct: 121 AEGAAADAGVIEAYGLGLGEPIRLSAEHGEGL-NELYAVL 159
Score = 160 (61.4 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ +AIVG+PNVGKSTL N L+G+ + D PG TRD + + ++ +IDTAG+
Sbjct: 3 LTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGLE- 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
T + ++ T +++ A++ + ++DA+ ++ D A+ + +I+ NK
Sbjct: 62 -TATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANK 120
>UNIPROTKB|Q723G9 [details] [associations]
symbol:rlmN "Probable dual-specificity RNA
methyltransferase RlmN" species:265669 "Listeria monocytogenes
serotype 4b str. F2365" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01849
InterPro:IPR004383 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF006004 SMART:SM00729
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539
GO:GO:0008033 EMBL:AE017262 GenomeReviews:AE017262_GR GO:GO:0001510
eggNOG:COG0820 HOGENOM:HOG000217991 KO:K06941 ProtClustDB:PRK14455
GO:GO:0070040 TIGRFAMs:TIGR00048 RefSeq:YP_013115.1
ProteinModelPortal:Q723G9 STRING:Q723G9 GeneID:2797600
KEGG:lmf:LMOf2365_0509 PATRIC:20322220 OMA:LRTINDD Uniprot:Q723G9
Length = 367
Score = 502 (181.8 bits), Expect = 7.1e-47, P = 7.1e-47
Identities = 116/338 (34%), Positives = 198/338 (58%)
Query: 537 GEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKW 596
G+ FRA Q+ W+++ V F +M+++ + L + + Q S DGT K+
Sbjct: 22 GQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKY 81
Query: 597 IFHVKK-NIIETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWV 655
+F + N+IETV + ++ ++C++TQVGC I C FC++G R+LT GEI+ Q+
Sbjct: 82 LFKLSDGNLIETVMMKQEYGLSVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMN 141
Query: 656 TEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVI 715
+ L +N++ +++++V+MG+GEP NY + + L++I D + RH+
Sbjct: 142 VQHYLDG-RNLE------ERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHIT 194
Query: 716 LSTSGIIP-MIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYS 774
+STSG+ P +ID ++ V LA+SLHA NN LR ++ I+K Y +++L+ A H Y+ +
Sbjct: 195 VSTSGLAPRIIDFANEDFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKT 254
Query: 775 PRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLICSKNSR 834
R ITFEY ML G+ND A+EL +L+ +++ L +NLIP+N + ++ ++++
Sbjct: 255 NRR-ITFEYIMLKGVNDHKKEALELAALLGEHRHLAY--VNLIPYNPV-DEHIDYERSTK 310
Query: 835 --IKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEE 870
+ F L +GI IR+ G DI+AACGQL ++
Sbjct: 311 EDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQ 348
>TAIR|locus:2195608 [details] [associations]
symbol:AT1G60230 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008173 "RNA methyltransferase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] HAMAP:MF_01849
InterPro:IPR004383 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 SMART:SM00729 EMBL:CP002684
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0051536 GO:GO:0006364
GO:GO:0008173 GO:GO:0001510 TIGRFAMs:TIGR00048 HOGENOM:HOG000217992
OMA:IYHFGVS UniGene:At.43275 UniGene:At.64986 EMBL:AY054695
EMBL:AY081476 IPI:IPI00549143 RefSeq:NP_564755.1
ProteinModelPortal:Q93XX3 SMR:Q93XX3 EnsemblPlants:AT1G60230.1
GeneID:842318 KEGG:ath:AT1G60230 TAIR:At1g60230 InParanoid:Q93XX3
PhylomeDB:Q93XX3 ProtClustDB:CLSN2688935 ArrayExpress:Q93XX3
Genevestigator:Q93XX3 Uniprot:Q93XX3
Length = 458
Score = 496 (179.7 bits), Expect = 3.1e-46, P = 3.1e-46
Identities = 121/338 (35%), Positives = 187/338 (55%)
Query: 533 VHELGEMPFRAKQLQKWIHKFGV--SDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISF 590
V G P +A L K ++K + ++ +++ L+ L++ + A + +
Sbjct: 109 VQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSAS 168
Query: 591 DGTRKWIFHVKKN-IIETVFIP-EKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGE 648
DGTRK +F + +IETV IP ++ R T+C+S+QVGCA+NC FC TGR G RNLT E
Sbjct: 169 DGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAE 228
Query: 649 IIGQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYG 708
I+ Q RR + ++ S ITN+V MGMGEP N + I A +++ ++
Sbjct: 229 IVEQAVYA----RRLLSHEVGS-----ITNVVFMGMGEPFHNIDNVIKAANIMVDENGLH 279
Query: 709 LSRRHVILSTSGIIPMIDKLAQECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACH 768
S R V +STSG++P + + +E LAVSL+A+ + +RN ++PI++KY L L+
Sbjct: 280 FSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLR 339
Query: 769 RYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPNSNLI 828
++ ++ + FEY ML G+ND+ A L+ L++ CKINLI FN S I
Sbjct: 340 EGLSSRHKYKVLFEYVMLAGVNDSMDDARRLVELVQG----IPCKINLIQFNPHSGSQFI 395
Query: 829 CSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQL 866
++ ++ F +L G V +R RGND AACGQL
Sbjct: 396 QTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQL 433
>TIGR_CMR|CJE_1882 [details] [associations]
symbol:CJE_1882 "radical SAM enzyme, Cfr family"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0008033 GO:GO:0001510 eggNOG:COG0820 HOGENOM:HOG000217991
KO:K06941 OMA:MACDFCA GO:GO:0070040 TIGRFAMs:TIGR00048
RefSeq:YP_179852.1 ProteinModelPortal:Q5HS83 STRING:Q5HS83
GeneID:3230641 KEGG:cjr:CJE1882 PATRIC:20045594
ProtClustDB:PRK14462 BioCyc:CJEJ195099:GJC0-1921-MONOMER
Uniprot:Q5HS83
Length = 356
Score = 494 (179.0 bits), Expect = 5.1e-46, P = 5.1e-46
Identities = 129/345 (37%), Positives = 194/345 (56%)
Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHV 600
FR KQ+ +WI++ ++F+ M+ L LR +L + + + ++ S DG+ K++F +
Sbjct: 23 FRVKQIYQWIYQKYANNFSDMSSLPKDLRLELAQNFHFSPVKCVKNEQSKDGSIKYLFEL 82
Query: 601 KKNI-IETVFIPEKN-------------RNTLCISTQVGCAINCIFCSTGRQGFVRNLTV 646
+ IE+V +P K R T+C+S+QVGC C FC T + G RNL+
Sbjct: 83 VDGLRIESVLLPMKEEKIDAEGKRISHARYTICVSSQVGCKSGCSFCLTAKGGLKRNLSA 142
Query: 647 GEIIGQ-LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDH 705
GEI+GQ LW+ +++ NI +R+I NIV MGMGEPL N K+ A+K++ +
Sbjct: 143 GEIVGQILWI-----KKQNNIPY----ERRI-NIVYMGMGEPLDNLKNVSKAVKILAQNE 192
Query: 706 AYGLSRRHVILSTSGIIPMIDKLAQ-ECPVELAVSLHASNNNLRNKLVPISKKYPLKELI 764
+S R +STSG+ I +L Q V LA+SLHA N+ LR +L+PI+K Y + ++
Sbjct: 193 GLAISPRRQTISTSGLAKQIKELGQMNLGVLLAISLHAVNDELRTELMPINKAYNIAAIM 252
Query: 765 LACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTSCKINLIPFNCFPN 824
A + R + FEY ++ GIND HA EL+ L+ N I K+NLI FN P+
Sbjct: 253 DAVREF-PIDQRKRVMFEYLLIDGINDKLEHAKELVKLL--NGI--KAKVNLILFN--PH 305
Query: 825 SNLICSKNS---RIKIFAKILMNSGIFVTIRKIRGNDINAACGQL 866
+ + S IK F +L N G+ TIR+ +G DI+AACGQL
Sbjct: 306 EGGLYKRPSLENAIK-FQDLLSNKGVTCTIRESKGLDISAACGQL 349
>TAIR|locus:2043225 [details] [associations]
symbol:AT2G39670 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA;RCA] [GO:0008173 "RNA methyltransferase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] HAMAP:MF_01849
InterPro:IPR004383 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF006004 SMART:SM00729
GO:GO:0005737 EMBL:CP002685 Gene3D:3.20.20.70 GO:GO:0051536
GO:GO:0006364 GO:GO:0008173 GO:GO:0001510 TIGRFAMs:TIGR00048
IPI:IPI00528130 RefSeq:NP_850319.1 UniGene:At.24979
ProteinModelPortal:F4IVY6 SMR:F4IVY6 PRIDE:F4IVY6
EnsemblPlants:AT2G39670.2 GeneID:818550 KEGG:ath:AT2G39670
OMA:KEHAEAV PhylomeDB:F4IVY6 Uniprot:F4IVY6
Length = 431
Score = 481 (174.4 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 127/336 (37%), Positives = 184/336 (54%)
Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVY-IKAPHIMSDQISFDGTRKWIFH 599
+R KQL I+K V+ ++L ++ RK L + + + I + DGT K +
Sbjct: 87 YRGKQLHHLIYKRKVNKVEDFSNLPLTFRKGLVDGGFKVGRSPIYQTVTATDGTIKLLLK 146
Query: 600 VKKNI-IETVFIP----EKN--RNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQ 652
++ N+ IETV IP EK R T C+S+QVGC + C FC+TG+ GF RNL EII Q
Sbjct: 147 LEDNLLIETVGIPVQDDEKGITRLTACVSSQVGCPLRCSFCATGKGGFSRNLQRHEIIEQ 206
Query: 653 LWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRR 712
+ + I K ++TN+V MGMGEP+LN KS + A + + D G +R
Sbjct: 207 V------------LAIEDVFKHRVTNVVFMGMGEPMLNLKSVLDAHRCLNKDIEIG--QR 252
Query: 713 HVILSTSGIIPMIDKLAQ-ECPVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYI 771
+ +ST G+ I KLA + LAVSLHA N +LR K+VP +K YPL+ ++ C Y
Sbjct: 253 MITISTVGVPNTIKKLASHKLQSTLAVSLHAPNQSLREKIVPSAKAYPLEAIMKDCRDYF 312
Query: 772 TYSPRHMITFEYCMLHGINDTDIHAIELISLMRK-NKILTSCKINLIPFNCFPNSNLICS 830
+ R ++FEY +L G+ND HA+EL L+R+ K + +NLIP+N S
Sbjct: 313 QETNRR-VSFEYALLAGVNDQVEHAVELAELLREWGK---TYHVNLIPYNPIEGSEYQRP 368
Query: 831 KNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQL 866
+ FA L + I ++R+ RG D +AACGQL
Sbjct: 369 YKKAVLAFAAALESRKITASVRQTRGLDASAACGQL 404
>UNIPROTKB|P0A644 [details] [associations]
symbol:rlmN "Probable dual-specificity RNA
methyltransferase RlmN" species:1773 "Mycobacterium tuberculosis"
[GO:0005618 "cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005886 GO:GO:0005737
GO:GO:0005618 Gene3D:3.20.20.70 EMBL:AE000516
GenomeReviews:AE000516_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0008033
EMBL:BX842581 GO:GO:0001510 eggNOG:COG0820 HOGENOM:HOG000217991
KO:K06941 GO:GO:0070040 TIGRFAMs:TIGR00048 PIR:B70924 PIR:C70924
RefSeq:NP_217395.1 RefSeq:NP_217396.1 RefSeq:NP_337458.1
ProteinModelPortal:P0A644 SMR:P0A644 PRIDE:P0A644
EnsemblBacteria:EBMYCT00000003622 EnsemblBacteria:EBMYCT00000071511
GeneID:887156 GeneID:887810 GeneID:925333 KEGG:mtc:MT2947
KEGG:mtu:Rv2879c KEGG:mtu:Rv2880c TubercuList:Rv2879c
TubercuList:Rv2880c ProtClustDB:CLSK792141 Uniprot:P0A644
Length = 364
Score = 464 (168.4 bits), Expect = 8.3e-43, P = 8.3e-43
Identities = 123/355 (34%), Positives = 195/355 (54%)
Query: 522 ADFAESIDKNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAP 581
AD + + V ELG FRAKQL + ++D +MTDL ++R ++ +++ P
Sbjct: 20 ADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPAAVRDRIAGAMF---P 76
Query: 582 HIM--SDQISFDG--TRKWIFH-VKKNIIETVFIPEKNRNTLCISTQVGCAINCIFCSTG 636
+++ S I+ D TRK ++ V + E+V + RNT+CIS+Q GC + C FC+TG
Sbjct: 77 NLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQAGCGMACPFCATG 136
Query: 637 RQGFVRNLTVGEIIGQLWVTEFKLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIG 696
+ G RNL+ EI+ Q+ LR + G R ++N+V MGMGEPL NY +
Sbjct: 137 QGGLTRNLSTAEILEQVRAGAAALR-------DDFGDR-LSNVVFMGMGEPLANYARVLA 188
Query: 697 ALKLILS--DHAYGLSRRHVILSTSGIIPMIDKLAQ-ECPVELAVSLHASNNNLRNKLVP 753
A++ I + +G+S R V +ST G+ P I LA V LA+SLHA ++ LR+ LVP
Sbjct: 189 AVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLHAPDDGLRDTLVP 248
Query: 754 ISKKYPLKELILACHRYITYSPRHMITFEYCMLHGINDTDIHAIELISLMRKNKILTS-C 812
++ ++ + E + A Y + R ++ EY ++ +ND A +L+ R +++L
Sbjct: 249 VNNRWRISEALDAARYYANVTGRR-VSIEYALIRDVNDQPWRA-DLLG-KRLHRVLGPLA 305
Query: 813 KINLIPFNCFPNSNLICSKNSRIKIFAKILMNSGIFVTIRKIRGNDINAACGQLS 867
+NLIP N P S+ S + F K + G+ T+R RG +I+AACGQL+
Sbjct: 306 HVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAACGQLA 360
>DICTYBASE|DDB_G0279259 [details] [associations]
symbol:DDB_G0279259 "putative GTP-binding protein"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0279259 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AAFI02000030 eggNOG:COG1160 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
RefSeq:XP_641756.1 ProteinModelPortal:Q54X21 STRING:Q54X21
EnsemblProtists:DDB0205682 GeneID:8621954 KEGG:ddi:DDB_G0279259
InParanoid:Q54X21 Uniprot:Q54X21
Length = 841
Score = 491 (177.9 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 121/320 (37%), Positives = 183/320 (57%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNS-RDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
KPV+ ++G+PNVGKST+FNR+ R ALV PG TRDR+YGEG++ + FI++DTGG
Sbjct: 152 KPVIAIIGKPNVGKSTIFNRIIEGQRRALVEEIPGTTRDRYYGEGFLYGREFILVDTGGL 211
Query: 61 EPEVKKG---IMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLR----KSGQP 113
E K+ + Q + A +D + GL DK + LR K G+P
Sbjct: 212 IGESKEDKDQFQGVIQDQAEIAMEEADAILFVLDYKSGLTSIDKELARMLRSKRQKLGKP 271
Query: 114 IVLVXXXXXXXXXXXXLDFYE-------LGIGNPHIISALYGNGIKNFLENILTIELPYK 166
I + DF E LG G P SA +G+ + + E IL+ + P+
Sbjct: 272 IY-IGVNKADNVSMRGEDFEEMKTQITRLGFGEPIPFSAHHGDNVHSMFELILS-QFPHM 329
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+K ++ I+++IVG+PN GKS+L+N ++ E R I D PGTT D + F
Sbjct: 330 DLSLEKLEEDLKPGP-IRISIVGQPNAGKSSLLNKIIEEERSIVSDIPGTTHDPVDCNFL 388
Query: 227 YNNKKYI-LIDTAGIRRRNKTFEV-IEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
+ + + LIDTAGIRRR+ T ++ +EK SV+ LK+I +++VV +++DA I+ QD+
Sbjct: 389 WRDTHELSLIDTAGIRRRS-THKIGLEKSSVLWALKAIEKSHVVFIVIDATIGITEQDLK 447
Query: 285 IANFIYESGRSLIVCVNKWD 304
IA+F+ E+ +S+I+ VNKWD
Sbjct: 448 IASFVVENRKSMIIIVNKWD 467
Score = 42 (19.8 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 1122 IERLIELIKKININHNF 1138
+ LIE+IK ++ H F
Sbjct: 740 VAELIEIIKLVSFKHKF 756
Score = 41 (19.5 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 924 FRHERPQYGRYRQFYQIGVEAIGFP 948
F+H+ P+ GR + +A G+P
Sbjct: 752 FKHKFPKMGRNTLKLKFAQQARGYP 776
Score = 37 (18.1 bits), Expect = 3.5e-42, Sum P(2) = 3.5e-42
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 386 KLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
KL++A Q PP V N + R+L
Sbjct: 765 KLKFAQQARGYPPTFVFWVNHPDNVEPSVVRFL 797
>TIGR_CMR|CJE_0435 [details] [associations]
symbol:CJE_0435 "GTPase family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0042254 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_178454.1 HSSP:Q9X1F8
ProteinModelPortal:Q5HW81 STRING:Q5HW81 GeneID:3231197
KEGG:cjr:CJE0435 PATRIC:20042570 OMA:YLENTYR
BioCyc:CJEJ195099:GJC0-440-MONOMER Uniprot:Q5HW81
Length = 460
Score = 447 (162.4 bits), Expect = 5.5e-41, P = 5.5e-41
Identities = 121/442 (27%), Positives = 219/442 (49%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
++L+G+PNVGKS+LFNR+ R A+ ++ G TRD + + +I K ++ID+GG +
Sbjct: 4 IILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQIHIHSKKAMLIDSGGLDESD 63
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXXX 124
+ + + K T + VDG+ ++D+ L+K G+PI LV
Sbjct: 64 E--LFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFYSLKKLGKPIALVINKVDNK 121
Query: 125 XXXXXL-DFYELGIGNPHIISALYGNGIKN---FLENILTIE--LP--------YKKFFK 170
+F G+ +S + G+ +LE L E +P + ++++
Sbjct: 122 KDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFLHEEFLIPDEEENLEDFLEYYE 181
Query: 171 K-KEFTNIHSIE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
+ KEF ++ +I+V IVG+ NVGKS+L+N+L+ + R + GTT D + +
Sbjct: 182 EGKEF-QFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVH 240
Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
+K +DTAGIR+R K + +E+F++ +T K + + + +L+LDA + + D IA
Sbjct: 241 KDKVIEFVDTAGIRKRGK-IQGLERFALNRTEKILSHSQIALLVLDAHEGFNELDERIAG 299
Query: 288 FIYESGRSLIVCVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMES 347
+ + +I+ +NKWD FL++A +SA+ ++ ++
Sbjct: 300 LVAKHYLGVIIVLNKWDKSEMDFDKTVKELRLDRFKFLAYAPVISVSALSGKRVHVLLDK 359
Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRK--KLIRPKLRYAHQGGKNPPIIVIHGN 405
I ++++ + TS++ + +A + HP KL+ K+ YA Q PP I + N
Sbjct: 360 ILQIFENFTQKIQTSKLNTLIENATRAHPLPHDYGKLV--KIYYAVQYDLAPPKIALIMN 417
Query: 406 RLKYIGNDYKRYLEKYFYRTFS 427
R K + YKRYL+ + F+
Sbjct: 418 RPKALHFSYKRYLQNQIRKEFN 439
>TAIR|locus:2099277 [details] [associations]
symbol:emb2738 "embryo defective 2738" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG1160 HOGENOM:HOG000242861 OMA:IEWISSS Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
EMBL:BT046184 IPI:IPI00529367 RefSeq:NP_187815.2 UniGene:At.21430
ProteinModelPortal:B5X565 SMR:B5X565 STRING:B5X565 PaxDb:B5X565
PRIDE:B5X565 EnsemblPlants:AT3G12080.1 GeneID:820382
KEGG:ath:AT3G12080 TAIR:At3g12080 PhylomeDB:B5X565
ProtClustDB:CLSN2918072 Genevestigator:B5X565 Uniprot:B5X565
Length = 663
Score = 335 (123.0 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 107/362 (29%), Positives = 173/362 (47%)
Query: 74 KQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK--SGQPIVLVXXXXXX--XXXXXX 129
KQ A VDG+ G D I ++LRK S + I+L
Sbjct: 259 KQATAAVDESAVIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQA 318
Query: 130 LDFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNIHSIEYIK-VA 186
+F+ LG P ISAL G G L+ + + I+L + +++E N YI +A
Sbjct: 319 SEFWSLGF-TPIPISALSGTGTGELLDLVCSGLIKLEIMENIEEEEEEN-----YIPAIA 372
Query: 187 IVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY-NNKKYILIDTAGIRRRNK 245
I+G+PNVGKS+++N+L+ E+R I GTTRD+I + F + +K+ LIDTAGIR+++
Sbjct: 373 IIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRKKSS 432
Query: 246 TFE---VIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
E SV + ++I ++VV L+++A I+ QD+ IA I G+ +V VNK
Sbjct: 433 VASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKGCLVVVNK 492
Query: 303 WDSX---XXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
WD+ L +A + +AI +++++ + + V L
Sbjct: 493 WDTIPNKNQETAAHYEDDVREKLRSLKWAPIVYSTAITGHSVDNIVVAAATVQKERSRRL 552
Query: 360 STSRITRALISAIK-NHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+ + + + A+ PP + R ++ Y Q PP V N K + Y+RY+
Sbjct: 553 STAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFSDTYRRYM 612
Query: 419 EK 420
EK
Sbjct: 613 EK 614
Score = 185 (70.2 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 36/74 (48%), Positives = 47/74 (63%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKS LFNRL A+V + PG+TRDR YG Y G + F+++DTGG
Sbjct: 161 VAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVS 220
Query: 65 KK--GIMHEMTKQT 76
K G+M E+ T
Sbjct: 221 KSPSGVMEELNVST 234
Score = 169 (64.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
K+ K + H ++ +VAIVG+PNVGKS L N L+GENR I D PG TRD +
Sbjct: 144 KRLAKNTQQIPEHLLQ--RVAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRS 201
Query: 226 EYNNKKYILIDTAGIRRRNKTFE-VIEKFSVIKTL 259
+ +++++++DT G+ +K+ V+E+ +V T+
Sbjct: 202 YWGDQEFVVVDTGGVMTVSKSPSGVMEELNVSTTI 236
>GENEDB_PFALCIPARUM|PFL0835w [details] [associations]
symbol:PFL0835w "GTP-binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 348 (127.6 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 105/352 (29%), Positives = 165/352 (46%)
Query: 131 DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGK 190
+F+ LG GNP S ++GNG+ L+ + K +E +I+ I ++ +GK
Sbjct: 524 EFWSLGFGNPFPCSGIHGNGLSEILDECIK---HIDKIKINEEHDDINEQNTINISFIGK 580
Query: 191 PNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL--FEYNNKKYILIDTAGIRRRNKT-- 246
PN GKS+++N +L NR I GTT DSI L + +++ Y LIDTAGI++R K
Sbjct: 581 PNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYRLIDTAGIQKRKKNVP 640
Query: 247 FEVIEKFSVI---KTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
F K+ + +T K+I ++V IL++D+ IS QDINIA I + +S I+C NKW
Sbjct: 641 FNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIARKIVQENKSCIICCNKW 700
Query: 304 DSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLST 361
D + F+ FISA + + Y + ++T
Sbjct: 701 DLIYNKNDIFNDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNIFHLAEETYKNYTKRVNT 760
Query: 362 SRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKY 421
+ + + A+ PP K + YA Q PP V N K + +Y +YLE
Sbjct: 761 NTLNDIIKEALLLRPPIPIKNKSLNIYYAFQSHIKPPSFVFFCNSEKSVYANYTKYLENK 820
Query: 422 FYRTFSLIDALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKN 473
F + K +IY + +K+ KII K+ K +++ +I KN
Sbjct: 821 IREAFDI-----KGTPIKIYYKQKKLR-KIINKD-KRPDKYNLD-IRAIQKN 864
Score = 164 (62.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 44/109 (40%), Positives = 59/109 (54%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNS-RDALVANYPGLTRDRHYGE-GYIGKKSFIIIDTGGF 60
P++ ++GRPNVGKST+FNRLT +D + TRD+ YGE + G K F ++DTGG
Sbjct: 309 PLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDVSSTRDKLYGEVEWEGYK-FELVDTGGL 367
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK 109
E +K E+ Q A VDG G+ +D I FLRK
Sbjct: 368 VFEQEK-FSKEIKDQILMALKESSVVIFVVDGIHGVDPRDIEICRFLRK 415
Score = 152 (58.6 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 39/123 (31%), Positives = 66/123 (53%)
Query: 170 KKKEFTNIHSIEYIK-VAIVGKPNVGKSTLINSLLG--ENRVITYDTPGTTRDSIKSLFE 226
KKK+ ++ I + ++I+G+PNVGKST+ N L ++ I D +TRD + E
Sbjct: 295 KKKKDVELNIIRNLPLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDV-SSTRDKLYGEVE 353
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
+ K+ L+DT G+ + F K ++ LK E++VVI ++D + +DI I
Sbjct: 354 WEGYKFELVDTGGLVFEQEKFSKEIKDQILMALK---ESSVVIFVVDGIHGVDPRDIEIC 410
Query: 287 NFI 289
F+
Sbjct: 411 RFL 413
Score = 43 (20.2 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 433 EKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFK 478
E++ V + RY+KI I +KK + N K I+ + K
Sbjct: 455 EEDDVEDDVERYDKINQCHIKYNIKKETSNSTHKNVKIYPKEDYKK 500
Score = 40 (19.1 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
Identities = 25/102 (24%), Positives = 41/102 (40%)
Query: 958 IMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKH---SLY 1014
I+C W + KN N N+ ID N I + +I H Y
Sbjct: 694 IICCNKWDLIYNKNDIF--NDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNIFHLAEETY 751
Query: 1015 LNSLRVLDSKNL--IIREILINAPKLLDYLEKDSLDHFYGIQ 1054
N + +++ L II+E L+ P + ++ SL+ +Y Q
Sbjct: 752 KNYTKRVNTNTLNDIIKEALLLRPPIP--IKNKSLNIYYAFQ 791
Score = 38 (18.4 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 151 IKNFLENILTIELPYKKFFKKKE 173
I FL + ++ P K+ KKE
Sbjct: 409 ICRFLRKYILLKHPQGKYINKKE 431
>UNIPROTKB|Q8I5N5 [details] [associations]
symbol:PFL0835w "GTP binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 348 (127.6 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 105/352 (29%), Positives = 165/352 (46%)
Query: 131 DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGK 190
+F+ LG GNP S ++GNG+ L+ + K +E +I+ I ++ +GK
Sbjct: 524 EFWSLGFGNPFPCSGIHGNGLSEILDECIK---HIDKIKINEEHDDINEQNTINISFIGK 580
Query: 191 PNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL--FEYNNKKYILIDTAGIRRRNKT-- 246
PN GKS+++N +L NR I GTT DSI L + +++ Y LIDTAGI++R K
Sbjct: 581 PNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYRLIDTAGIQKRKKNVP 640
Query: 247 FEVIEKFSVI---KTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
F K+ + +T K+I ++V IL++D+ IS QDINIA I + +S I+C NKW
Sbjct: 641 FNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIARKIVQENKSCIICCNKW 700
Query: 304 DSXXXXXXXXXXXXXXXXXXF--LSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLST 361
D + F+ FISA + + Y + ++T
Sbjct: 701 DLIYNKNDIFNDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNIFHLAEETYKNYTKRVNT 760
Query: 362 SRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEKY 421
+ + + A+ PP K + YA Q PP V N K + +Y +YLE
Sbjct: 761 NTLNDIIKEALLLRPPIPIKNKSLNIYYAFQSHIKPPSFVFFCNSEKSVYANYTKYLENK 820
Query: 422 FYRTFSLIDALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKN 473
F + K +IY + +K+ KII K+ K +++ +I KN
Sbjct: 821 IREAFDI-----KGTPIKIYYKQKKLR-KIINKD-KRPDKYNLD-IRAIQKN 864
Score = 164 (62.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 44/109 (40%), Positives = 59/109 (54%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNS-RDALVANYPGLTRDRHYGE-GYIGKKSFIIIDTGGF 60
P++ ++GRPNVGKST+FNRLT +D + TRD+ YGE + G K F ++DTGG
Sbjct: 309 PLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDVSSTRDKLYGEVEWEGYK-FELVDTGGL 367
Query: 61 EPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRK 109
E +K E+ Q A VDG G+ +D I FLRK
Sbjct: 368 VFEQEK-FSKEIKDQILMALKESSVVIFVVDGIHGVDPRDIEICRFLRK 415
Score = 152 (58.6 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 39/123 (31%), Positives = 66/123 (53%)
Query: 170 KKKEFTNIHSIEYIK-VAIVGKPNVGKSTLINSLLG--ENRVITYDTPGTTRDSIKSLFE 226
KKK+ ++ I + ++I+G+PNVGKST+ N L ++ I D +TRD + E
Sbjct: 295 KKKKDVELNIIRNLPLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDV-SSTRDKLYGEVE 353
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
+ K+ L+DT G+ + F K ++ LK E++VVI ++D + +DI I
Sbjct: 354 WEGYKFELVDTGGLVFEQEKFSKEIKDQILMALK---ESSVVIFVVDGIHGVDPRDIEIC 410
Query: 287 NFI 289
F+
Sbjct: 411 RFL 413
Score = 43 (20.2 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 433 EKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFK 478
E++ V + RY+KI I +KK + N K I+ + K
Sbjct: 455 EEDDVEDDVERYDKINQCHIKYNIKKETSNSTHKNVKIYPKEDYKK 500
Score = 40 (19.1 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
Identities = 25/102 (24%), Positives = 41/102 (40%)
Query: 958 IMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKH---SLY 1014
I+C W + KN N N+ ID N I + +I H Y
Sbjct: 694 IICCNKWDLIYNKNDIF--NDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNIFHLAEETY 751
Query: 1015 LNSLRVLDSKNL--IIREILINAPKLLDYLEKDSLDHFYGIQ 1054
N + +++ L II+E L+ P + ++ SL+ +Y Q
Sbjct: 752 KNYTKRVNTNTLNDIIKEALLLRPPIP--IKNKSLNIYYAFQ 791
Score = 38 (18.4 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 151 IKNFLENILTIELPYKKFFKKKE 173
I FL + ++ P K+ KKE
Sbjct: 409 ICRFLRKYILLKHPQGKYINKKE 431
>UNIPROTKB|Q2GDM7 [details] [associations]
symbol:NSE_0536 "GTPase Der" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 391 (142.7 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 116/432 (26%), Positives = 204/432 (47%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGK-KSFIIIDTGGFEPEVK 65
+VG+ NVGKSTLFN++ + ++ + G+TRD + KS +++DT GF P+
Sbjct: 9 IVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNPQ-- 66
Query: 66 KGIMH-EMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSG--QPIVLVXXXXX 122
H E ++T+ A +D + + +D L N+LR++ IVLV
Sbjct: 67 ----HPETVERTEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVLVCNKSD 120
Query: 123 XXXXXXXLDFYELGIGNPHIISALYGNGIK---NFLENILTIELPYKKFFKKKEFTNIHS 179
D G N +ISA + G++ +++E+ + +L K +++
Sbjct: 121 RKDRD---DCSLFGFQNVFLISAEHSLGLRELISYIESFIPEQLDTPKNGSEEQ------ 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+G+PNVGKS+L+N +G++RV+ GTTRD I ++ + L+DTAG
Sbjct: 172 -RRIKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQWKCTTFELVDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ-NISAQDINIANFIYESGRSLIV 298
+R++ + + +EK + L++ E++VVI + D + QD + N I E G+ +I+
Sbjct: 231 LRKKQRVTDGLEKICNSRALRTSAESDVVIFMCDISNFTLERQDFLLMNRILEQGKPMIL 290
Query: 299 CVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFN--FISAIKLNNINSFMESINHVYDSSI 356
NK D+ L + FIS + + + ++ ++D S
Sbjct: 291 VGNKKDAVDAIELENIKDFISLQAQKLIASQIPIFFISCLHEGDFSYILDECRRLHDDSK 350
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++ST R+ L ++ HP KL+Y + N + V+ NR + + Y
Sbjct: 351 RNISTHRLNMWLQEIVRRHPHPMVNSKAVKLKYIKKL-LNKFVFVLSANRPELVAESYLN 409
Query: 417 YLEKYFYRTFSL 428
Y+ R F +
Sbjct: 410 YVRNSLIRDFRI 421
Score = 167 (63.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI-KSLFEYNNKKYILIDTAGIRR 242
+V+IVGK NVGKSTL N + E R IT D G TRD + + + + K +L+DTAG
Sbjct: 6 RVSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNP 65
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES-GRSLIVCV- 300
++ E +E+ T +I E+++V+ ++D I ++D+ AN++ + G S IV V
Sbjct: 66 QHP--ETVER-----TEYAIKESDMVLFVID--NKIDSEDMLFANWLRRNAGNSKIVLVC 116
Query: 301 NKWD 304
NK D
Sbjct: 117 NKSD 120
Score = 39 (18.8 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 1158 FVLSENLRTLGLKVILNCVFNNIHESFK 1185
FVLS N L + LN V N++ F+
Sbjct: 393 FVLSANRPELVAESYLNYVRNSLIRDFR 420
Score = 39 (18.8 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 874 VKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYD 912
+KK + F+ L+ + RPE A + + N+LI D
Sbjct: 384 IKKLLNKFVFVLSAN----RPELVAESYLNYVRNSLIRD 418
Score = 39 (18.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 395 KNP-PIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIYNRYEKIGL 449
++P P++ +LKYI K+ L K+ + ++ A +V E Y Y + L
Sbjct: 368 RHPHPMVNSKAVKLKYI----KKLLNKFVF----VLSANRPELVAESYLNYVRNSL 415
Score = 37 (18.1 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1100 RYDFLIKKFSNKFVPASGFAIGIERLIELIK 1130
R D + F N F+ ++ ++G+ LI I+
Sbjct: 124 RDDCSLFGFQNVFLISAEHSLGLRELISYIE 154
>TIGR_CMR|NSE_0536 [details] [associations]
symbol:NSE_0536 "putative GTP-binding protein EngA"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0005525
"GTP binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 391 (142.7 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 116/432 (26%), Positives = 204/432 (47%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGK-KSFIIIDTGGFEPEVK 65
+VG+ NVGKSTLFN++ + ++ + G+TRD + KS +++DT GF P+
Sbjct: 9 IVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNPQ-- 66
Query: 66 KGIMH-EMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSG--QPIVLVXXXXX 122
H E ++T+ A +D + + +D L N+LR++ IVLV
Sbjct: 67 ----HPETVERTEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVLVCNKSD 120
Query: 123 XXXXXXXLDFYELGIGNPHIISALYGNGIK---NFLENILTIELPYKKFFKKKEFTNIHS 179
D G N +ISA + G++ +++E+ + +L K +++
Sbjct: 121 RKDRD---DCSLFGFQNVFLISAEHSLGLRELISYIESFIPEQLDTPKNGSEEQ------ 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+G+PNVGKS+L+N +G++RV+ GTTRD I ++ + L+DTAG
Sbjct: 172 -RRIKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQWKCTTFELVDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ-NISAQDINIANFIYESGRSLIV 298
+R++ + + +EK + L++ E++VVI + D + QD + N I E G+ +I+
Sbjct: 231 LRKKQRVTDGLEKICNSRALRTSAESDVVIFMCDISNFTLERQDFLLMNRILEQGKPMIL 290
Query: 299 CVNKWDSXXXXXXXXXXXXXXXXXXFLSFAMFN--FISAIKLNNINSFMESINHVYDSSI 356
NK D+ L + FIS + + + ++ ++D S
Sbjct: 291 VGNKKDAVDAIELENIKDFISLQAQKLIASQIPIFFISCLHEGDFSYILDECRRLHDDSK 350
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++ST R+ L ++ HP KL+Y + N + V+ NR + + Y
Sbjct: 351 RNISTHRLNMWLQEIVRRHPHPMVNSKAVKLKYIKKL-LNKFVFVLSANRPELVAESYLN 409
Query: 417 YLEKYFYRTFSL 428
Y+ R F +
Sbjct: 410 YVRNSLIRDFRI 421
Score = 167 (63.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI-KSLFEYNNKKYILIDTAGIRR 242
+V+IVGK NVGKSTL N + E R IT D G TRD + + + + K +L+DTAG
Sbjct: 6 RVSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNP 65
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES-GRSLIVCV- 300
++ E +E+ T +I E+++V+ ++D I ++D+ AN++ + G S IV V
Sbjct: 66 QHP--ETVER-----TEYAIKESDMVLFVID--NKIDSEDMLFANWLRRNAGNSKIVLVC 116
Query: 301 NKWD 304
NK D
Sbjct: 117 NKSD 120
Score = 39 (18.8 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 1158 FVLSENLRTLGLKVILNCVFNNIHESFK 1185
FVLS N L + LN V N++ F+
Sbjct: 393 FVLSANRPELVAESYLNYVRNSLIRDFR 420
Score = 39 (18.8 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 874 VKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYD 912
+KK + F+ L+ + RPE A + + N+LI D
Sbjct: 384 IKKLLNKFVFVLSAN----RPELVAESYLNYVRNSLIRD 418
Score = 39 (18.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 395 KNP-PIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLIDALEKNIVGEIYNRYEKIGL 449
++P P++ +LKYI K+ L K+ + ++ A +V E Y Y + L
Sbjct: 368 RHPHPMVNSKAVKLKYI----KKLLNKFVF----VLSANRPELVAESYLNYVRNSL 415
Score = 37 (18.1 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1100 RYDFLIKKFSNKFVPASGFAIGIERLIELIK 1130
R D + F N F+ ++ ++G+ LI I+
Sbjct: 124 RDDCSLFGFQNVFLISAEHSLGLRELISYIE 154
>DICTYBASE|DDB_G0269822 [details] [associations]
symbol:mhisS "putative mitochondrial histidyl-tRNA
synthetase" species:44689 "Dictyostelium discoideum" [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004821 "histidine-tRNA ligase activity" evidence=IEA;ISS]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 PIRSF:PIRSF001549
PROSITE:PS50862 InterPro:IPR004154 dictyBase:DDB_G0269822
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005759 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 RefSeq:XP_646319.1 HSSP:P60911
STRING:Q55D12 EnsemblProtists:DDB0231331 GeneID:8617274
KEGG:ddi:DDB_G0269822 OMA:IEREPRE ProtClustDB:CLSZ2497290
Uniprot:Q55D12
Length = 501
Score = 378 (138.1 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 123/348 (35%), Positives = 172/348 (49%)
Query: 868 GEETDIVKKEMYSFIDELNGDN-----LSLRPEGTASVIRSVI-ENNLIYDGP-KRLWYS 920
GE +DIV KEM+ F D N + + LRPEGTA VIR++I +++ + P +R +Y
Sbjct: 108 GESSDIVMKEMFKFKDYSNESSSPPSMICLRPEGTAGVIRAIINQSSTNHLTPAQRYYYQ 167
Query: 921 GPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNL--NLKNICLELNS 978
GPMFR+ERPQ GR RQF+Q+GVE IG P D E+I M + L N + L++NS
Sbjct: 168 GPMFRYERPQRGRQRQFHQLGVELIGDQHPRSDVEIIDMAMNFIERLGINKSDTLLKINS 227
Query: 979 IGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILIN--AP 1036
+G+ + K Y L + + + K IK NSLR+LDSK ++I +N AP
Sbjct: 228 LGDTDSIKVYNETLKRFYNDNVN-KLSPISIKRLERGNSLRILDSKER--QDIELNKLAP 284
Query: 1037 KLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEW-----TTDKLGS 1091
+ D L D F + K L+ ISY+I+ LVRG+DYY T+FE + G
Sbjct: 285 SIQDSLSIQCKDRFNNVLKGLDCLGISYEIDKSLVRGLDYYRHTIFEIQIIDNNQNNKGQ 344
Query: 1092 QN--------SICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQC- 1142
+ +I GGGRYD L + K+ +IG IE + +
Sbjct: 345 RQQQQQQQGLAILGGGRYDGLANQLGYKYKEILP-SIGWASGIERMVLFLDQSKIPNSIR 403
Query: 1143 DIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKR 1190
I I AF L NLR G L+ FN E+ Q+K+
Sbjct: 404 PIGIAITDSSLSENAFKLCSNLRRNGWSSTLS-TFNLEDENLSKQLKK 450
>GENEDB_PFALCIPARUM|PF14_0066 [details] [associations]
symbol:PF14_0066 "radical SAM protein,
putative" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0051536 EMBL:AE014187 GO:GO:0006364 GO:GO:0008173
GO:GO:0001510 HOGENOM:HOG000217991 TIGRFAMs:TIGR00048
RefSeq:XP_001348239.2 ProteinModelPortal:Q8IM25
EnsemblProtists:PF14_0066:mRNA GeneID:811648 KEGG:pfa:PF14_0066
EuPathDB:PlasmoDB:PF3D7_1406900 KO:K15632 ProtClustDB:CLSZ2428899
Uniprot:Q8IM25
Length = 362
Score = 377 (137.8 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 112/346 (32%), Positives = 171/346 (49%)
Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMS-DQISFDGTRKWIFH 599
+R KQ+ I+K + + NKM ++ +R++LKN + I ++ +D K +F
Sbjct: 22 YRLKQIMDNIYKGKIIEINKMKNIPTEIRRELKNIFHNNILSIKPIKELKYDRAYKVLFQ 81
Query: 600 VKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTEF 658
K N IE + + +LCIS+Q+GC+ C FC+TG+ G R L + EI QL
Sbjct: 82 CKDNEKIEATSLDFGSHKSLCISSQIGCSFGCKFCATGQIGIKRQLDIDEITDQL----- 136
Query: 659 KLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVILST 718
+ S+G I NI MGMGEPL N +++ ++ + +S R + +ST
Sbjct: 137 -------LYFQSKGV-DIKNISFMGMGEPLAN-PYVFDSIQFFNDNNLFSISNRRINIST 187
Query: 719 SGIIPMIDKLAQECP-VELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSPRH 777
G++P I KL P V LA SLH+ R++LVPI+K +P E+ I + R
Sbjct: 188 VGLLPGIKKLNNIFPQVNLAFSLHSPFTEERDQLVPINKLFPFNEVFDLLDERIAKTGRR 247
Query: 778 MITFEYCMLHGINDTDIHAIELIS---LMRKNKILTSCKINLIPFNCFPN--SNLICSKN 832
+ Y ++ +ND+ HA E +S R N I + LIP+N N N +
Sbjct: 248 -VWISYILIKNLNDSKDHA-EALSDHICKRPNNIRYLYNVCLIPYNKAKNVDENFHRLDD 305
Query: 833 S-RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
+ +I F KIL +GI R G I+AACGQL + +KE
Sbjct: 306 AEKILQFEKILKKNGISFFYRNSFGYSIDAACGQLYADYEPKKRKE 351
>UNIPROTKB|Q8IM25 [details] [associations]
symbol:PF14_0066 "Radical SAM protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0051536 EMBL:AE014187 GO:GO:0006364 GO:GO:0008173
GO:GO:0001510 HOGENOM:HOG000217991 TIGRFAMs:TIGR00048
RefSeq:XP_001348239.2 ProteinModelPortal:Q8IM25
EnsemblProtists:PF14_0066:mRNA GeneID:811648 KEGG:pfa:PF14_0066
EuPathDB:PlasmoDB:PF3D7_1406900 KO:K15632 ProtClustDB:CLSZ2428899
Uniprot:Q8IM25
Length = 362
Score = 377 (137.8 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 112/346 (32%), Positives = 171/346 (49%)
Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMS-DQISFDGTRKWIFH 599
+R KQ+ I+K + + NKM ++ +R++LKN + I ++ +D K +F
Sbjct: 22 YRLKQIMDNIYKGKIIEINKMKNIPTEIRRELKNIFHNNILSIKPIKELKYDRAYKVLFQ 81
Query: 600 VKKNI-IETVFIPEKNRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTEF 658
K N IE + + +LCIS+Q+GC+ C FC+TG+ G R L + EI QL
Sbjct: 82 CKDNEKIEATSLDFGSHKSLCISSQIGCSFGCKFCATGQIGIKRQLDIDEITDQL----- 136
Query: 659 KLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVILST 718
+ S+G I NI MGMGEPL N +++ ++ + +S R + +ST
Sbjct: 137 -------LYFQSKGV-DIKNISFMGMGEPLAN-PYVFDSIQFFNDNNLFSISNRRINIST 187
Query: 719 SGIIPMIDKLAQECP-VELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSPRH 777
G++P I KL P V LA SLH+ R++LVPI+K +P E+ I + R
Sbjct: 188 VGLLPGIKKLNNIFPQVNLAFSLHSPFTEERDQLVPINKLFPFNEVFDLLDERIAKTGRR 247
Query: 778 MITFEYCMLHGINDTDIHAIELIS---LMRKNKILTSCKINLIPFNCFPN--SNLICSKN 832
+ Y ++ +ND+ HA E +S R N I + LIP+N N N +
Sbjct: 248 -VWISYILIKNLNDSKDHA-EALSDHICKRPNNIRYLYNVCLIPYNKAKNVDENFHRLDD 305
Query: 833 S-RIKIFAKILMNSGIFVTIRKIRGNDINAACGQLSGEETDIVKKE 877
+ +I F KIL +GI R G I+AACGQL + +KE
Sbjct: 306 AEKILQFEKILKKNGISFFYRNSFGYSIDAACGQLYADYEPKKRKE 351
>TIGR_CMR|CBU_1258 [details] [associations]
symbol:CBU_1258 "nucleoside diphosphate kinase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:FRVVAMK
ProtClustDB:PRK00668 RefSeq:NP_820252.1 ProteinModelPortal:Q83C71
SMR:Q83C71 PRIDE:Q83C71 GeneID:1209163 KEGG:cbu:CBU_1258
PATRIC:17931249 BioCyc:CBUR227377:GJ7S-1243-MONOMER Uniprot:Q83C71
Length = 144
Score = 353 (129.3 bits), Expect = 6.1e-31, P = 6.1e-31
Identities = 73/124 (58%), Positives = 94/124 (75%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RT S+I DA+ KN++G+IY+R+EK GLKIIAA M LSK EKFY++HK+RPF+ +LV
Sbjct: 5 RTLSIIKPDAVAKNVIGQIYSRFEKAGLKIIAAKMCHLSKPQAEKFYAVHKDRPFYPDLV 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
FM GPV IQVLEGE+AI K+R ++G T+P +A GTIRADFA+SID N VH + P
Sbjct: 65 KFMTQGPVMIQVLEGENAIVKNREIMGATNPKEALPGTIRADFADSIDANAVHG-SDGPE 123
Query: 542 RAKQ 545
AK+
Sbjct: 124 TAKE 127
>UNIPROTKB|O83107 [details] [associations]
symbol:rlmN "Probable dual-specificity RNA
methyltransferase RlmN" species:243276 "Treponema pallidum subsp.
pallidum str. Nichols" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_01849 InterPro:IPR004383 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 SMART:SM00729 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 GO:GO:0008033 GO:GO:0001510
EMBL:AE000520 GenomeReviews:AE000520_GR eggNOG:COG0820 KO:K06941
GO:GO:0070040 TIGRFAMs:TIGR00048 PIR:D71371 RefSeq:NP_218508.1
ProteinModelPortal:O83107 IntAct:O83107 GeneID:2611395
KEGG:tpa:TP0068 PATRIC:20530073 OMA:EMVFIPD ProtClustDB:CLSK218510
Uniprot:O83107
Length = 340
Score = 338 (124.0 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 91/263 (34%), Positives = 136/263 (51%)
Query: 541 FRAKQLQKWIHKFGVSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDGTRKWIFHV 600
FR Q+ +WI G +DF+ M+DLS R +L + I + + DGT K +
Sbjct: 25 FRGVQVFRWIAA-GCTDFHAMSDLSSETRARLARACVISDTRVYTTLRDVDGTLKLGIEL 83
Query: 601 K-KNIIETVFIPEK-NRNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTEF 658
K K +E V + ++ +R T C+S QVGC + C FC TG+ GF RNL+ EI+ Q
Sbjct: 84 KDKRRVEAVLLVDQVSRKTACLSCQVGCPMACAFCQTGQLGFARNLSASEIVEQF----- 138
Query: 659 KLRREKNIKINSQGKRQITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVILST 718
L E+ + G + N+V MGMGEP+LN + A++++ LS + + +ST
Sbjct: 139 -LHLERCV-----GT--LDNVVFMGMGEPMLNLDAVCRAIEILSHPQGRDLSEKRITIST 190
Query: 719 SGIIPMIDKLAQEC-PVELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSPRH 777
SG I LA V LAVSL +N LR +L+P + L +L A RY
Sbjct: 191 SGHCRGIYSLADRALQVRLAVSLTTANAPLRARLMPRAAHDSLAKLKSAI-RYFNEKSGK 249
Query: 778 MITFEYCMLHGINDTDIHAIELI 800
+T E ++ G+N ++ HA E+I
Sbjct: 250 RVTLELALMRGVNTSERHAQEVI 272
>TAIR|locus:2091161 [details] [associations]
symbol:AT3G19630 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM;IEA] [GO:0008173 "RNA methyltransferase
activity" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] InterPro:IPR004383
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF006004 GO:GO:0005737 EMBL:CP002686 Gene3D:3.20.20.70
GO:GO:0051536 GO:GO:0006364 GO:GO:0008173 GO:GO:0001510
eggNOG:COG0820 HOGENOM:HOG000217991 TIGRFAMs:TIGR00048
EMBL:BT003921 EMBL:BT005008 IPI:IPI00533080 RefSeq:NP_188597.1
UniGene:At.38376 ProteinModelPortal:Q84JV6 SMR:Q84JV6 STRING:Q84JV6
PRIDE:Q84JV6 DNASU:821500 EnsemblPlants:AT3G19630.1 GeneID:821500
KEGG:ath:AT3G19630 TAIR:At3g19630 InParanoid:Q84JV6 OMA:IFIEYIM
PhylomeDB:Q84JV6 ProtClustDB:CLSN2684692 ArrayExpress:Q84JV6
Genevestigator:Q84JV6 Uniprot:Q84JV6
Length = 372
Score = 328 (120.5 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 77/196 (39%), Positives = 118/196 (60%)
Query: 615 RNTLCISTQVGCAINCIFCSTGRQGFVRNLTVGEIIGQLWVTEFKLRREKNIKINSQGKR 674
R+TLCIS+QVGC + C FC+TG GF NLT GEI+ QL +++
Sbjct: 114 RSTLCISSQVGCKMGCTFCATGTMGFKSNLTSGEIVEQL--------------VHASRIA 159
Query: 675 QITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVILSTSGIIPMIDKLAQECP- 733
I NIV MGMGEPL NY + + A++++L+ + LS + + +ST GI+ I+KL + P
Sbjct: 160 DIRNIVFMGMGEPLNNYNAVVEAVRVMLNQ-PFQLSPKRITISTVGIVHAINKLHNDLPG 218
Query: 734 VELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSPRHMITFEYCMLHGINDTD 793
V LAVSLHA +R +++P ++ +PL++L+ A + S + I EY ML G+ND +
Sbjct: 219 VSLAVSLHAPVQEIRCQIMPAARAFPLQKLMDALQTFQKNS-QQKIFIEYIMLDGVNDQE 277
Query: 794 IHAIELISLMRKNKIL 809
HA L L++ +++
Sbjct: 278 QHAHLLGELLKTFQVV 293
Score = 311 (114.5 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 81/203 (39%), Positives = 119/203 (58%)
Query: 676 ITNIVMMGMGEPLLNYKSTIGALKLILSDHAYGLSRRHVILSTSGIIPMIDKLAQECP-V 734
I NIV MGMGEPL NY + + A++++L+ + LS + + +ST GI+ I+KL + P V
Sbjct: 161 IRNIVFMGMGEPLNNYNAVVEAVRVMLNQ-PFQLSPKRITISTVGIVHAINKLHNDLPGV 219
Query: 735 ELAVSLHASNNNLRNKLVPISKKYPLKELILACHRYITYSPRHMITFEYCMLHGINDTDI 794
LAVSLHA +R +++P ++ +PL++L+ A + S + I EY ML G+ND +
Sbjct: 220 SLAVSLHAPVQEIRCQIMPAARAFPLQKLMDALQTFQKNS-QQKIFIEYIMLDGVNDQEQ 278
Query: 795 HAIELISLMRKNKILTSCKINLIPFNCFPN-SNLICSKNSRIKIFAKILMNS-GIFVTIR 852
HA L L++ +++ INLIPFN + S S + F KIL + I TIR
Sbjct: 279 HAHLLGELLKTFQVV----INLIPFNPIGSTSQFETSSIQGVSRFQKILRETYKIRTTIR 334
Query: 853 KIRGNDINAACGQLSGEETDIVK 875
K G DI+ ACGQL + DI K
Sbjct: 335 KEMGQDISGACGQLVVNQPDIKK 357
>TIGR_CMR|CPS_4256 [details] [associations]
symbol:CPS_4256 "nucleoside diphosphate kinase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:FRVVAMK
ProtClustDB:PRK00668 RefSeq:YP_270906.1 ProteinModelPortal:Q47WB6
SMR:Q47WB6 STRING:Q47WB6 GeneID:3518664 KEGG:cps:CPS_4256
PATRIC:21471377 BioCyc:CPSY167879:GI48-4266-MONOMER Uniprot:Q47WB6
Length = 143
Score = 323 (118.8 bits), Expect = 9.8e-28, P = 9.8e-28
Identities = 64/125 (51%), Positives = 88/125 (70%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTFS++ DA+ KN +G+IYNR+E GLKI+A+ M LS+ E FY+ H RPFF LV
Sbjct: 5 RTFSIVKPDAVAKNFIGQIYNRFETAGLKIVASKMIHLSQEKAEGFYAEHSERPFFGALV 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
FM SGPV +QVLEGE+A+ K+R ++G T+P +A GTIRAD A+SID+N H +
Sbjct: 65 EFMTSGPVMVQVLEGENAVLKNREIMGATNPAEALAGTIRADLADSIDENAAHGSDALES 124
Query: 542 RAKQL 546
A+++
Sbjct: 125 AAREI 129
>TIGR_CMR|SO_2274 [details] [associations]
symbol:SO_2274 "nucleoside diphosphate kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:FRVVAMK
ProtClustDB:PRK00668 RefSeq:NP_717870.1 ProteinModelPortal:Q8EEU0
SMR:Q8EEU0 GeneID:1170003 KEGG:son:SO_2274 PATRIC:23524169
Uniprot:Q8EEU0
Length = 143
Score = 323 (118.8 bits), Expect = 9.8e-28, P = 9.8e-28
Identities = 65/113 (57%), Positives = 82/113 (72%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTFS+I DA+ KN +G IYNR+E GLKI+AA M L+K E FY+ H R FF LV
Sbjct: 5 RTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALV 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
FM SGP+ +QVLEGE+A+ HR ++G T+P +AA GTIRADFA+SID+N H
Sbjct: 65 AFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAQSIDENAAH 117
>TIGR_CMR|CJE_0377 [details] [associations]
symbol:CJE_0377 "nucleoside diphosphate kinase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:FRVVAMK
ProtClustDB:PRK00668 RefSeq:YP_178396.1 ProteinModelPortal:Q5HWD9
SMR:Q5HWD9 STRING:Q5HWD9 GeneID:3231139 KEGG:cjr:CJE0377
PATRIC:20042458 BioCyc:CJEJ195099:GJC0-382-MONOMER Uniprot:Q5HWD9
Length = 137
Score = 321 (118.1 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 64/113 (56%), Positives = 84/113 (74%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
+T S+I DA++K ++G+I +R+E GL+I A +LSK E FY++HK RPFFK+LV
Sbjct: 3 KTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLV 62
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
FMISGPV + VLEGE A+ K+R L+G T+P +A GTIRADFAESID N VH
Sbjct: 63 EFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVH 115
>TIGR_CMR|APH_1217 [details] [associations]
symbol:APH_1217 "nucleoside diphosphate kinase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 RefSeq:YP_505748.1
ProteinModelPortal:Q2GIQ3 SMR:Q2GIQ3 STRING:Q2GIQ3 GeneID:3931219
KEGG:aph:APH_1217 PATRIC:20951218 OMA:FRVVAMK ProtClustDB:PRK00668
BioCyc:APHA212042:GHPM-1222-MONOMER Uniprot:Q2GIQ3
Length = 140
Score = 307 (113.1 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 60/113 (53%), Positives = 82/113 (72%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RT S++ D +E+ I+G + + E GLK++A M +L+ + E+FY +H++RPFF LV
Sbjct: 4 RTLSILKPDVVERGIIGNVISYIEAAGLKVVAQRMCRLTVSQAEEFYDVHRDRPFFPELV 63
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
FM SGPV +QVLEGE AI +R ++G T+P +AAKGTIRADFAESID N VH
Sbjct: 64 KFMTSGPVVVQVLEGESAIAVYRDVMGATNPKEAAKGTIRADFAESIDANCVH 116
>UNIPROTKB|Q9KTX4 [details] [associations]
symbol:ndk "Nucleoside diphosphate kinase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0015949
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
ProtClustDB:PRK00668 OMA:AEGFYYV PIR:C82283 RefSeq:NP_230405.1
ProteinModelPortal:Q9KTX4 SMR:Q9KTX4 DNASU:2615299 GeneID:2615299
KEGG:vch:VC0756 PATRIC:20080623 Uniprot:Q9KTX4
Length = 142
Score = 304 (112.1 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 62/126 (49%), Positives = 90/126 (71%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTFS+I DA+++N++GEIY+R EK GL+IIAA M LS+ FY+ H+ +PFF+ L
Sbjct: 5 RTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLK 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
FM SGP+ +QVLEGE+AI ++R L+G T+P +AA GT+RAD+A S+ N VH
Sbjct: 65 EFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPAS 124
Query: 542 RAKQLQ 547
A++++
Sbjct: 125 AAREIE 130
>TIGR_CMR|VC_0756 [details] [associations]
symbol:VC_0756 "nucleoside diphosphate kinase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0015949
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
ProtClustDB:PRK00668 OMA:AEGFYYV PIR:C82283 RefSeq:NP_230405.1
ProteinModelPortal:Q9KTX4 SMR:Q9KTX4 DNASU:2615299 GeneID:2615299
KEGG:vch:VC0756 PATRIC:20080623 Uniprot:Q9KTX4
Length = 142
Score = 304 (112.1 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 62/126 (49%), Positives = 90/126 (71%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTFS+I DA+++N++GEIY+R EK GL+IIAA M LS+ FY+ H+ +PFF+ L
Sbjct: 5 RTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLK 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
FM SGP+ +QVLEGE+AI ++R L+G T+P +AA GT+RAD+A S+ N VH
Sbjct: 65 EFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPAS 124
Query: 542 RAKQLQ 547
A++++
Sbjct: 125 AAREIE 130
>TIGR_CMR|NSE_0560 [details] [associations]
symbol:NSE_0560 "nucleoside diphosphate kinase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:AEGFYYV
RefSeq:YP_506442.1 ProteinModelPortal:Q2GDK4 SMR:Q2GDK4
STRING:Q2GDK4 GeneID:3932166 KEGG:nse:NSE_0560 PATRIC:22681165
ProtClustDB:CLSK2528109 BioCyc:NSEN222891:GHFU-578-MONOMER
Uniprot:Q2GDK4
Length = 139
Score = 303 (111.7 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 63/114 (55%), Positives = 81/114 (71%)
Query: 424 RTFSLI--DALEKNIVGEIYNRY-EKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNL 480
RT S++ D + +NI G++ N Y E GL+IIA L++ E FY +HK+R FF +L
Sbjct: 3 RTLSILKPDVISRNITGKV-NAYIEAAGLQIIAMKQLHLTRIQAEAFYVVHKDRFFFNDL 61
Query: 481 VNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
VNFM S PV +QVL G+DA+ ++R L+GDTDP KAAKGTIR DFAESID N VH
Sbjct: 62 VNFMTSAPVIVQVLSGDDAVHRYRKLMGDTDPKKAAKGTIRGDFAESIDANCVH 115
>TIGR_CMR|ECH_1117 [details] [associations]
symbol:ECH_1117 "nucleoside diphosphate kinase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
ProtClustDB:PRK00668 RefSeq:YP_507901.1 ProteinModelPortal:Q2GF82
STRING:Q2GF82 GeneID:3928009 KEGG:ech:ECH_1117 PATRIC:20577566
OMA:AEGFYYV BioCyc:ECHA205920:GJNR-1120-MONOMER Uniprot:Q2GF82
Length = 142
Score = 288 (106.4 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/113 (49%), Positives = 83/113 (73%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
+T S++ D +++NI G++ + E GLKII M L++ E+FY+IHK++ FF L+
Sbjct: 4 KTLSILKPDVIKRNITGQVNSYIENSGLKIIIQKMCLLTRCQAEEFYAIHKSQHFFVPLI 63
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
+FM+SGP+ +QVL+GE+AI +R ++G TDP KA+ GTIRADFAE+ID N VH
Sbjct: 64 DFMVSGPIIVQVLQGENAISLYREIMGATDPKKASPGTIRADFAENIDANCVH 116
>UNIPROTKB|P0A763 [details] [associations]
symbol:ndk "Ndk" species:83333 "Escherichia coli K-12"
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0009117 "nucleotide
metabolic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] [GO:0006228 "UTP biosynthetic process"
evidence=IEA] [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006165 "nucleoside diphosphate phosphorylation" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA;IDA] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:FRVVAMK
ProtClustDB:PRK00668 EMBL:X57555 PIR:JH0495 RefSeq:NP_417013.1
RefSeq:YP_490746.1 PDB:2HUR PDBsum:2HUR ProteinModelPortal:P0A763
SMR:P0A763 DIP:DIP-31870N IntAct:P0A763 MINT:MINT-1255778
PhosSite:P0809416 SWISS-2DPAGE:P0A763 PaxDb:P0A763 PRIDE:P0A763
EnsemblBacteria:EBESCT00000001479 EnsemblBacteria:EBESCT00000016723
GeneID:12930715 GeneID:945611 KEGG:ecj:Y75_p2471 KEGG:eco:b2518
PATRIC:32120429 EchoBASE:EB0644 EcoGene:EG10650
BioCyc:EcoCyc:NUCLEOSIDE-DIP-KIN-MONOMER
BioCyc:ECOL316407:JW2502-MONOMER
BioCyc:MetaCyc:NUCLEOSIDE-DIP-KIN-MONOMER EvolutionaryTrace:P0A763
Genevestigator:P0A763 Uniprot:P0A763
Length = 143
Score = 280 (103.6 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 53/125 (42%), Positives = 81/125 (64%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTFS+I +A+ KN++G I+ R+E G KI+ M L+ FY+ H +PFF LV
Sbjct: 5 RTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLV 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
FM SGP+ + VLEGE+A+++HR L+G T+P A GT+RAD+A+S+ +N H +
Sbjct: 65 EFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSVES 124
Query: 542 RAKQL 546
A+++
Sbjct: 125 AAREI 129
>TIGR_CMR|SPO_2444 [details] [associations]
symbol:SPO_2444 "nucleoside diphosphate kinase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:RLVKYMS
ProtClustDB:PRK00668 RefSeq:YP_167661.1 ProteinModelPortal:Q5LQP4
SMR:Q5LQP4 GeneID:3194414 KEGG:sil:SPO2444 PATRIC:23378287
Uniprot:Q5LQP4
Length = 140
Score = 275 (101.9 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 55/113 (48%), Positives = 77/113 (68%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTFS+I DA +N+ G+I ++E+ GL+I+A ++K FY +H RPF+ L
Sbjct: 5 RTFSIIKPDATRRNLTGKINAKFEEAGLRIVAQKRIHMTKEQAGVFYGVHAERPFYDELC 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
FM S PV +QVLEGE+AI K+R ++G T+P AA GTIRA+FAES+ +N VH
Sbjct: 65 EFMSSAPVVVQVLEGENAIAKNREVMGATNPADAAPGTIRAEFAESVGENSVH 117
>TIGR_CMR|GSU_1110 [details] [associations]
symbol:GSU_1110 "nucleoside diphosphate kinase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0006183
HOGENOM:HOG000224565 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
ProtClustDB:PRK00668 OMA:AEGFYYV RefSeq:NP_952163.1
ProteinModelPortal:Q74E54 SMR:Q74E54 GeneID:2688549
KEGG:gsu:GSU1110 PATRIC:22024982
BioCyc:GSUL243231:GH27-1105-MONOMER Uniprot:Q74E54
Length = 137
Score = 256 (95.2 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 56/115 (48%), Positives = 76/115 (66%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKK--LSKNDVEKFYSIHKNRPFFKN 479
RTF++I DA+E+NI+G+I + E G +I+ MKK LSK + E FY +HK RPFF +
Sbjct: 3 RTFAIIKPDAVERNIIGKILEKVETAGFRIVG--MKKILLSKCEAEGFYYVHKERPFFND 60
Query: 480 LVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
L +FM PV + VLE E+AI R ++G T+P A GTIR DF SI++N VH
Sbjct: 61 LCSFMSRSPVVVMVLERENAINTWREVMGATNPANAEAGTIRKDFGLSIEENSVH 115
>TIGR_CMR|DET_0394 [details] [associations]
symbol:DET_0394 "nucleoside diphosphate kinase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 ProtClustDB:PRK00668 OMA:IARFERK
RefSeq:YP_181139.1 ProteinModelPortal:Q3Z9G0 SMR:Q3Z9G0
STRING:Q3Z9G0 GeneID:3230270 KEGG:det:DET0394 PATRIC:21607855
BioCyc:DETH243164:GJNF-394-MONOMER Uniprot:Q3Z9G0
Length = 142
Score = 249 (92.7 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 49/113 (43%), Positives = 73/113 (64%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RT L+ D + + + GEI R EK+GLK+I M ++ +K Y+ H+ RPFFK+LV
Sbjct: 3 RTLLLVKPDGVNRGLSGEILGRMEKLGLKMIGLRMLQMDAVLADKHYAPHRERPFFKDLV 62
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
++ SGP+ V EGE+A++K R +G TDP K+ KGT+R D +I++N VH
Sbjct: 63 TYITSGPIVAAVFEGENAVEKMRKAMGATDPAKSEKGTVRGDLGINIEQNTVH 115
>ZFIN|ZDB-GENE-030131-7656 [details] [associations]
symbol:nme2a "non-metastatic cells 2a, protein
(NM23B) expressed in" species:7955 "Danio rerio" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006165 "nucleoside diphosphate phosphorylation" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
ZFIN:ZDB-GENE-030131-7656 GO:GO:0005524 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:BX004803 IPI:IPI00993417
Ensembl:ENSDART00000121731 ArrayExpress:E7FBE9 Bgee:E7FBE9
Uniprot:E7FBE9
Length = 170
Score = 246 (91.7 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 49/139 (35%), Positives = 82/139 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G K++A + + ++ + + YS K+RPFF LV
Sbjct: 32 RTFIAIKPDGVQRGLVGEIIKRFEQKGFKLVAMKLIQADEDLLRQHYSDLKDRPFFPGLV 91
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
++M +GPV V EG + IK R+++G+T+PI + GTIR DF + +NI+H +
Sbjct: 92 SYMSAGPVVAMVWEGFNVIKTGRVMLGETNPIDSKPGTIRGDFCVQVGRNIIHGSDSVES 151
Query: 542 RAKQLQKWIHKFGVSDFNK 560
++ W + D+ K
Sbjct: 152 ANTEINLWFKPDEICDYTK 170
>TIGR_CMR|CHY_0215 [details] [associations]
symbol:CHY_0215 "nucleoside diphosphate kinase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004550 "nucleoside diphosphate kinase activity" evidence=ISS]
[GO:0015949 "nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
ProtClustDB:PRK00668 RefSeq:YP_359087.1 ProteinModelPortal:Q3AFJ7
SMR:Q3AFJ7 STRING:Q3AFJ7 GeneID:3727407 KEGG:chy:CHY_0215
PATRIC:21273611 OMA:IARFERK BioCyc:CHYD246194:GJCN-216-MONOMER
Uniprot:Q3AFJ7
Length = 149
Score = 245 (91.3 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 47/142 (33%), Positives = 83/142 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF ++ D +++ +VGEI +R+EK G K++ + ++S+ E Y HK +PFF+ L+
Sbjct: 3 RTFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGLL 62
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
NF+ SGPV V EG++ I R ++G T+P+KA GTIR + + +N++H
Sbjct: 63 NFITSGPVVAMVWEGKEVIATAREMMGATNPLKAQPGTIRGTYGIDVGRNVIHGSDSPES 122
Query: 542 RAKQLQKWIHKFGVSDFNKMTD 563
A+++ + + + + K D
Sbjct: 123 AAREIALFFKEEELLSYEKTLD 144
>UNIPROTKB|F6PVJ7 [details] [associations]
symbol:NME1 "Nucleoside diphosphate kinase" species:9823
"Sus scrofa" [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0043388 "positive regulation of
DNA binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0004536 "deoxyribonuclease
activity" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] HAMAP:MF_00451 InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 GO:GO:0005525
GO:GO:0005739 GO:GO:0005524 GO:GO:0000287 GO:GO:0007595
GO:GO:0004536 GO:GO:0050679 GO:GO:0043388 GO:GO:0006183
GO:GO:0004550 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 GeneTree:ENSGT00700000104244
CTD:4830 OMA:DERTFIM EMBL:CU929012 RefSeq:NP_001191688.1
UniGene:Ssc.19546 Ensembl:ENSSSCT00000019152 GeneID:100142626
KEGG:ssc:100142626 Uniprot:F6PVJ7
Length = 152
Score = 242 (90.2 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 48/137 (35%), Positives = 81/137 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFMQASEDLLKEHYIDLKDRPFFAGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 TYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W H + D+
Sbjct: 126 AEKEIGLWFHPEELVDY 142
>UNIPROTKB|P52174 [details] [associations]
symbol:NME1-1 "Nucleoside diphosphate kinase A 1"
species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0007399 GO:GO:0030154
GO:GO:0046872 GO:GO:0006897 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 HOGENOM:HOG000224564 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 HOVERGEN:HBG000423 EMBL:X92956
IPI:IPI00688948 UniGene:Bt.5340 PDB:1BHN PDBsum:1BHN
ProteinModelPortal:P52174 SMR:P52174 STRING:P52174 PRIDE:P52174
EvolutionaryTrace:P52174 Uniprot:P52174
Length = 152
Score = 241 (89.9 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 46/130 (35%), Positives = 78/130 (60%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ ++GEI R+E+ G +++A + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLIGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 125
Query: 542 RAKQLQKWIH 551
K++ W H
Sbjct: 126 AEKEIALWFH 135
>SGD|S000001550 [details] [associations]
symbol:YNK1 "Nucleoside diphosphate kinase" species:4932
"Saccharomyces cerevisiae" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA;IMP]
[GO:0009117 "nucleotide metabolic process" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005758 "mitochondrial
intermembrane space" evidence=IEA;IDA] [GO:0009142 "nucleoside
triphosphate biosynthetic process" evidence=IDA] [GO:0006165
"nucleoside diphosphate phosphorylation" evidence=IEA;IDA]
[GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA;IDA] [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
SGD:S000001550 GO:GO:0005829 GO:GO:0005524 GO:GO:0005758
GO:GO:0046872 GO:GO:0006281 GO:GO:0006974 EMBL:BK006944 EMBL:X75780
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 GeneTree:ENSGT00700000104244 GO:GO:0009142
OMA:FRVVAMK OrthoDB:EOG470XSR EMBL:D13562 EMBL:Z28067 EMBL:AY558263
PIR:S37889 RefSeq:NP_012856.1 PDB:3B54 PDBsum:3B54
ProteinModelPortal:P36010 SMR:P36010 DIP:DIP-1969N IntAct:P36010
MINT:MINT-402348 STRING:P36010 UCD-2DPAGE:P36010 PaxDb:P36010
PeptideAtlas:P36010 EnsemblFungi:YKL067W GeneID:853798
KEGG:sce:YKL067W CYGD:YKL067w SABIO-RK:P36010
EvolutionaryTrace:P36010 NextBio:974942 Genevestigator:P36010
GermOnline:YKL067W Uniprot:P36010
Length = 153
Score = 240 (89.5 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 45/137 (32%), Positives = 81/137 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +V +I +R+EK G K++A + K +E+ Y+ H +PFF +V
Sbjct: 7 RTFIAVKPDGVQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMV 66
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+FM SGP+ V EG+D +++ R ++G T+P+ +A GTIR DF + +N+ H +
Sbjct: 67 SFMKSGPILATVWEGKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLGRNVCHGSDSVDS 126
Query: 542 RAKQLQKWIHKFGVSDF 558
+++ W K + D+
Sbjct: 127 AEREINLWFKKEELVDW 143
>ASPGD|ASPL0000017184 [details] [associations]
symbol:swoH species:162425 "Emericella nidulans"
[GO:0009142 "nucleoside triphosphate biosynthetic process"
evidence=IDA] [GO:0051211 "anisotropic cell growth" evidence=IMP]
[GO:0006644 "phospholipid metabolic process" evidence=RCA]
[GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA;RCA] [GO:0006228 "UTP biosynthetic process"
evidence=IEA] [GO:0000747 "conjugation with cellular fusion"
evidence=IEA] [GO:0006165 "nucleoside diphosphate phosphorylation"
evidence=IEA] [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005739 GO:GO:0005524
GO:GO:0046872 EMBL:BN001302 EMBL:AACD01000144 GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:RIIGATR
EMBL:AY057453 RefSeq:XP_681485.1 ProteinModelPortal:Q8TFN0
SMR:Q8TFN0 STRING:Q8TFN0 PRIDE:Q8TFN0 EnsemblFungi:CADANIAT00004263
GeneID:2868941 KEGG:ani:AN8216.2 OrthoDB:EOG470XSR Uniprot:Q8TFN0
Length = 153
Score = 239 (89.2 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 47/128 (36%), Positives = 77/128 (60%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
+TF I D +++ +VG I +R+E G K+ A + S++ +E+ YS K +PFF LV
Sbjct: 5 QTFIAIKPDGVQRGLVGPIISRFENRGFKLAAMKLTSPSRSLLEQHYSDLKEKPFFPGLV 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M+SGP+ V EG+D +K R ++G T+P+ +A GTIR DFA + +N+ H +
Sbjct: 65 TYMLSGPIVAMVWEGKDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVES 124
Query: 542 RAKQLQKW 549
K++ W
Sbjct: 125 AKKEIGLW 132
>UNIPROTKB|P15531 [details] [associations]
symbol:NME1 "Nucleoside diphosphate kinase A" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0002762 "negative
regulation of myeloid leukocyte differentiation" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0010976 "positive regulation of
neuron projection development" evidence=IEA] [GO:0014075 "response
to amine stimulus" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0019215 "intermediate filament binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0033574
"response to testosterone stimulus" evidence=IEA] [GO:0035690
"cellular response to drug" evidence=IEA] [GO:0043015
"gamma-tubulin binding" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0051591 "response to cAMP"
evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0071398 "cellular response to fatty acid"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0004536 "deoxyribonuclease activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000287 "magnesium ion binding" evidence=IDA]
[GO:0043388 "positive regulation of DNA binding" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0050679 "positive
regulation of epithelial cell proliferation" evidence=IMP]
[GO:0005829 "cytosol" evidence=TAS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055086 "nucleobase-containing small molecule
metabolic process" evidence=TAS] [GO:0042802 "identical protein
binding" evidence=IPI] Reactome:REACT_111217 InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 GO:GO:0005525
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0008285
GO:GO:0007399 GO:GO:0030154 GO:GO:0042981 GO:GO:0000287
GO:GO:0006897 Pathway_Interaction_DB:arf6_traffickingpathway
EMBL:CH471109 GO:GO:0015949
Pathway_Interaction_DB:arf6downstreampathway GO:GO:0004536
GO:GO:0050679 GO:GO:0043388 DrugBank:DB00441 DrugBank:DB00396
GO:GO:0006183 EMBL:AC005839 GO:GO:0004550 eggNOG:COG0105
HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 OMA:ARQMMGK HOVERGEN:HBG000423
HPA:HPA041113 OrthoDB:EOG4S1T8G EMBL:X17620 EMBL:X73066 EMBL:X75598
EMBL:AF487339 EMBL:AK291105 EMBL:CR542104 EMBL:CR542115
EMBL:BC000293 EMBL:BC018994 IPI:IPI00012048 IPI:IPI00375531
PIR:A33386 RefSeq:NP_000260.1 RefSeq:NP_937818.1 UniGene:Hs.463456
PDB:1JXV PDB:1UCN PDB:2HVD PDB:2HVE PDB:3L7U PDBsum:1JXV
PDBsum:1UCN PDBsum:2HVD PDBsum:2HVE PDBsum:3L7U
ProteinModelPortal:P15531 SMR:P15531 DIP:DIP-39164N IntAct:P15531
MINT:MINT-221462 STRING:P15531 PhosphoSite:P15531 DMDM:127981
DOSAC-COBS-2DPAGE:P15531 OGP:P15531 PaxDb:P15531 PRIDE:P15531
DNASU:4830 Ensembl:ENST00000013034 Ensembl:ENST00000336097
Ensembl:ENST00000393196 GeneID:4830 KEGG:hsa:4830 UCSC:uc002ith.2
UCSC:uc002iti.2 CTD:4830 GeneCards:GC17P049231 HGNC:HGNC:7849
HPA:HPA008467 MIM:156490 neXtProt:NX_P15531 PharmGKB:PA249
BioCyc:MetaCyc:ENSG00000011052-MONOMER ChEMBL:CHEMBL2159
EvolutionaryTrace:P15531 GenomeRNAi:4830 NextBio:18606
ArrayExpress:P15531 Bgee:P15531 CleanEx:HS_NME1
Genevestigator:P15531 GermOnline:ENSG00000011052 Uniprot:P15531
Length = 152
Score = 238 (88.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 47/137 (34%), Positives = 80/137 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++ + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W H + D+
Sbjct: 126 AEKEIGLWFHPEELVDY 142
>UNIPROTKB|Q32Q12 [details] [associations]
symbol:NME1-NME2 "Nucleoside diphosphate kinase"
species:9606 "Homo sapiens" [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004550 "nucleoside diphosphate
kinase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
EMBL:CH471109 GO:GO:0006183 EMBL:AC005839 GO:GO:0004550
HOGENOM:HOG000224564 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 UniGene:Hs.463456 HGNC:HGNC:7850 EMBL:BC107894
IPI:IPI00604590 SMR:Q32Q12 STRING:Q32Q12 Ensembl:ENST00000555572
UCSC:uc002itk.3 OMA:GXASEEH Uniprot:Q32Q12
Length = 292
Score = 237 (88.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 47/137 (34%), Positives = 79/137 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A + S+ +++ Y K+RPFF LV
Sbjct: 146 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLV 205
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 206 KYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKS 265
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 266 AEKEISLWFKPEELVDY 282
Score = 202 (76.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 40/113 (35%), Positives = 69/113 (61%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++ + S++ +++ Y K+RPFF LV
Sbjct: 31 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLV 90
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
+M SGPV V EG + +K R+++G+T+P + GTIR DF + + + +
Sbjct: 91 KYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMAN 143
>UNIPROTKB|P22392 [details] [associations]
symbol:NME2 "Nucleoside diphosphate kinase B" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0004550 "nucleoside diphosphate kinase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009142 "nucleoside
triphosphate biosynthetic process" evidence=IDA] [GO:0001726
"ruffle" evidence=IDA] [GO:0007155 "cell adhesion" evidence=TAS]
[GO:0030027 "lamellipodium" evidence=IDA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0045618
"positive regulation of keratinocyte differentiation" evidence=IMP]
[GO:0045682 "regulation of epidermis development" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0005829 "cytosol" evidence=TAS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055086 "nucleobase-containing small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0048471 GO:GO:0043066 GO:GO:0042493
GO:GO:0046872 GO:GO:0003677 GO:GO:0007155 GO:GO:0005882
GO:GO:0003700 GO:GO:0006351 GO:GO:0030027 GO:GO:0001726
GO:GO:0004673 GO:GO:0051591 GO:GO:0015949 GO:GO:0007595
GO:GO:0050679 GO:GO:0045618 GO:GO:0006183 EMBL:AC005839
GO:GO:0004550 GO:GO:0002762 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 GO:GO:0009142 HPA:HPA041113 OrthoDB:EOG4S1T8G
UniGene:Hs.463456 HPA:HPA008467 GermOnline:ENSG00000011052 CTD:4831
EMBL:X58965 EMBL:M36981 EMBL:L16785 EMBL:DQ109675 EMBL:BC002476
EMBL:BC133029 EMBL:BC133031 EMBL:U29200 IPI:IPI00026260
IPI:IPI00795292 PIR:A49798 RefSeq:NP_001018146.1
RefSeq:NP_001018147.1 RefSeq:NP_001018148.1 RefSeq:NP_001018149.1
RefSeq:NP_002503.1 PDB:1NSK PDB:1NUE PDB:3BBB PDB:3BBC PDB:3BBF
PDBsum:1NSK PDBsum:1NUE PDBsum:3BBB PDBsum:3BBC PDBsum:3BBF
ProteinModelPortal:P22392 SMR:P22392 IntAct:P22392
MINT:MINT-1429922 STRING:P22392 PhosphoSite:P22392 DMDM:127983
DOSAC-COBS-2DPAGE:P22392 OGP:P22392 UCD-2DPAGE:P22392 PRIDE:P22392
DNASU:4831 DNASU:654364 Ensembl:ENST00000393193
Ensembl:ENST00000393198 GeneID:4831 GeneID:654364 KEGG:hsa:4831
KEGG:hsa:654364 UCSC:uc002itj.3 UCSC:uc002itl.3 CTD:654364
GeneCards:GC17P049230 GeneCards:GC17P049242 HGNC:HGNC:7850
HPA:CAB002169 HPA:CAB040571 MIM:156491 neXtProt:NX_P22392
PharmGKB:PA162398077 InParanoid:P22392 PhylomeDB:P22392
BioCyc:MetaCyc:HS04463-MONOMER ChEMBL:CHEMBL2160 ChiTaRS:NME2
EvolutionaryTrace:P22392 NextBio:18612 ArrayExpress:P22392
Bgee:P22392 Genevestigator:P22392 Uniprot:P22392
Length = 152
Score = 237 (88.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 47/137 (34%), Positives = 79/137 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A + S+ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKS 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 126 AEKEISLWFKPEELVDY 142
>MGI|MGI:97356 [details] [associations]
symbol:Nme2 "NME/NM23 nucleoside diphosphate kinase 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001726 "ruffle" evidence=ISO] [GO:0002762
"negative regulation of myeloid leukocyte differentiation"
evidence=ISO] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=ISO] [GO:0004673 "protein histidine kinase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=ISO] [GO:0005504 "fatty acid binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005882
"intermediate filament" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006165 "nucleoside diphosphate phosphorylation"
evidence=ISO] [GO:0006183 "GTP biosynthetic process" evidence=ISO]
[GO:0006228 "UTP biosynthetic process" evidence=ISO] [GO:0006241
"CTP biosynthetic process" evidence=ISO] [GO:0008144 "drug binding"
evidence=ISO] [GO:0009117 "nucleotide metabolic process"
evidence=IEA] [GO:0009142 "nucleoside triphosphate biosynthetic
process" evidence=ISO] [GO:0010976 "positive regulation of neuron
projection development" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0019215 "intermediate
filament binding" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030027 "lamellipodium" evidence=ISO] [GO:0030819
"positive regulation of cAMP biosynthetic process" evidence=ISO]
[GO:0031966 "mitochondrial membrane" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0045618 "positive regulation of keratinocyte differentiation"
evidence=ISO] [GO:0045682 "regulation of epidermis development"
evidence=ISO] [GO:0046777 "protein autophosphorylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=ISO] [GO:0051259 "protein oligomerization" evidence=ISO]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
MGI:MGI:97356 GO:GO:0005739 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0004673 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 OrthoDB:EOG4S1T8G CTD:4831 EMBL:X68193
EMBL:AK012447 EMBL:BC066995 EMBL:BC086892 EMBL:BC086893
IPI:IPI00127417 PIR:S29241 RefSeq:NP_001070997.1 RefSeq:NP_032731.1
UniGene:Mm.1260 ProteinModelPortal:Q01768 SMR:Q01768 IntAct:Q01768
STRING:Q01768 PhosphoSite:Q01768 REPRODUCTION-2DPAGE:Q01768
SWISS-2DPAGE:Q01768 PaxDb:Q01768 PRIDE:Q01768
Ensembl:ENSMUST00000021217 Ensembl:ENSMUST00000072566 GeneID:18103
KEGG:mmu:18103 InParanoid:Q01768 NextBio:293275 Bgee:Q01768
Genevestigator:Q01768 GermOnline:ENSMUSG00000020857 Uniprot:Q01768
Length = 152
Score = 237 (88.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 47/137 (34%), Positives = 79/137 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A + S+ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 126 AEKEIHLWFKPEELIDY 142
>UNIPROTKB|Q50KA9 [details] [associations]
symbol:NME1 "Nucleoside diphosphate kinase A" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0046872 GO:GO:0006897 GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:ARQMMGK
HOVERGEN:HBG000423 GeneTree:ENSGT00700000104244 OrthoDB:EOG4S1T8G
EMBL:AB207044 RefSeq:NP_001019808.1 UniGene:Cfa.15094
ProteinModelPortal:Q50KA9 SMR:Q50KA9 STRING:Q50KA9 PRIDE:Q50KA9
Ensembl:ENSCAFT00000027420 GeneID:480558 KEGG:cfa:480558
InParanoid:Q50KA9 NextBio:20855561 Uniprot:Q50KA9
Length = 152
Score = 236 (88.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 48/137 (35%), Positives = 82/137 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++++VGEI R+E+ G ++IA + + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRSLVGEIIKRFEQKGFRLIAMKLIQASEDLLKEHYIDLKDRPFFAGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMQSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 126 AEKEIGLWFQPEELVDY 142
>ZFIN|ZDB-GENE-040426-1043 [details] [associations]
symbol:nme4 "non-metastatic cells 4, protein
expressed in" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006165 "nucleoside diphosphate phosphorylation" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] HAMAP:MF_00451 InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 ZFIN:ZDB-GENE-040426-1043
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:CU464084 EMBL:CT961050
IPI:IPI00997500 Ensembl:ENSDART00000139835 ArrayExpress:F1R2F7
Bgee:F1R2F7 Uniprot:F1R2F7
Length = 193
Score = 236 (88.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 40/129 (31%), Positives = 76/129 (58%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ ++GE+ R+E+ G +++ M + + + Y + +PF+ +L+ +M SGP+
Sbjct: 54 DGVQRRLIGEVIKRFEQRGFRLVGLKMLQAPDKLLAQHYVSLQKKPFYSSLLYYMTSGPI 113
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
V EG + +K R+++GDTDP AA GTIR DF+ I +N+VH + +++ W
Sbjct: 114 VAMVWEGHNVVKTSRMMVGDTDPAAAAPGTIRGDFSVHISRNVVHASDSVEGAQREISLW 173
Query: 550 IHKFGVSDF 558
H+ + D+
Sbjct: 174 FHRSELVDW 182
>RGD|619877 [details] [associations]
symbol:Nme2 "NME/NM23 nucleoside diphosphate kinase 2"
species:10116 "Rattus norvegicus" [GO:0001726 "ruffle"
evidence=ISO;ISS] [GO:0002762 "negative regulation of myeloid
leukocyte differentiation" evidence=IDA] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=ISO;IDA] [GO:0004673 "protein
histidine kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0005504 "fatty
acid binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006165 "nucleoside diphosphate
phosphorylation" evidence=IDA] [GO:0006183 "GTP biosynthetic
process" evidence=IDA] [GO:0006228 "UTP biosynthetic process"
evidence=IDA] [GO:0006241 "CTP biosynthetic process" evidence=IDA]
[GO:0008144 "drug binding" evidence=IPI] [GO:0009142 "nucleoside
triphosphate biosynthetic process" evidence=ISO] [GO:0010976
"positive regulation of neuron projection development"
evidence=IMP] [GO:0019215 "intermediate filament binding"
evidence=IPI] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0030027 "lamellipodium" evidence=ISO;ISS] [GO:0030819 "positive
regulation of cAMP biosynthetic process" evidence=IMP] [GO:0031966
"mitochondrial membrane" evidence=IDA] [GO:0034599 "cellular
response to oxidative stress" evidence=IEP] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO;ISS] [GO:0045618
"positive regulation of keratinocyte differentiation"
evidence=ISO;ISS] [GO:0045682 "regulation of epidermis development"
evidence=ISO;ISS] [GO:0046777 "protein autophosphorylation"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=ISO;ISS] [GO:0051259 "protein oligomerization"
evidence=IDA] [GO:0060416 "response to growth hormone stimulus"
evidence=IEP] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEP] [GO:0071398 "cellular response to fatty acid"
evidence=IEP] [GO:0005882 "intermediate filament" evidence=IDA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
RGD:619877 GO:GO:0051259 GO:GO:0005886 GO:GO:0005524 GO:GO:0048471
GO:GO:0043066 GO:GO:0010976 GO:GO:0031966 GO:GO:0071333
GO:GO:0046872 GO:GO:0008144 GO:GO:0034599 GO:GO:0004674
GO:GO:0030819 GO:GO:0046777 GO:GO:0030027 GO:GO:0071398
GO:GO:0005504 GO:GO:0001726 GO:GO:0004673 GO:GO:0060416
GO:GO:0050679 GO:GO:0045618 GO:GO:0006183 GO:GO:0004550
GO:GO:0002762 eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 GeneTree:ENSGT00700000104244 OrthoDB:EOG4S1T8G
CTD:4831 OMA:RIIGATR EMBL:M55331 EMBL:M91597 EMBL:BC086599
IPI:IPI00325189 PIR:A41849 RefSeq:NP_114021.2 UniGene:Rn.927
ProteinModelPortal:P19804 SMR:P19804 IntAct:P19804 MINT:MINT-233154
STRING:P19804 PhosphoSite:P19804 World-2DPAGE:0004:P19804
PRIDE:P19804 Ensembl:ENSRNOT00000003611 GeneID:83782 KEGG:rno:83782
InParanoid:P19804 SABIO-RK:P19804 NextBio:616343
ArrayExpress:P19804 Genevestigator:P19804
GermOnline:ENSRNOG00000002671 Uniprot:P19804
Length = 152
Score = 235 (87.8 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 47/137 (34%), Positives = 79/137 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A + S+ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 126 AEKEIGLWFKPEELIDY 142
>DICTYBASE|DDB_G0273805 [details] [associations]
symbol:ndkC-2 "NDP kinase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0009617 "response to bacterium" evidence=IEP]
[GO:0030141 "secretory granule" evidence=IDA] [GO:0030036 "actin
cytoskeleton organization" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IDA] [GO:0006414 "translational elongation" evidence=IDA]
[GO:0005840 "ribosome" evidence=IDA] [GO:0009142 "nucleoside
triphosphate biosynthetic process" evidence=IDA] [GO:0006187 "dGTP
biosynthetic process from dGDP" evidence=IDA] [GO:0006186 "dGDP
phosphorylation" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA;IDA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] [GO:0006165 "nucleoside diphosphate
phosphorylation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0009117 "nucleotide metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0050765
"negative regulation of phagocytosis" evidence=IMP] [GO:0048550
"negative regulation of pinocytosis" evidence=IMP] [GO:0045920
"negative regulation of exocytosis" evidence=IMP] [GO:0016049 "cell
growth" evidence=IMP] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
dictyBase:DDB_G0273805 dictyBase:DDB_G0273069 GO:GO:0005886
GO:GO:0005524 GO:GO:0045335 GO:GO:0009617 GO:GO:0005856
GO:GO:0046872 GO:GO:0030036 GO:GO:0016049 GO:GO:0030141
GO:GO:0007186 GenomeReviews:CM000151_GR GO:GO:0005840
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0050765 GO:GO:0006414
GO:GO:0006183 GO:GO:0045920 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 EMBL:J05457
EMBL:L23067 PIR:A49547 RefSeq:XP_644519.1 RefSeq:XP_644731.1
PDB:1B4S PDB:1B99 PDB:1BUX PDB:1F3F PDB:1F6T PDB:1HHQ PDB:1HIY
PDB:1HLW PDB:1KDN PDB:1LEO PDB:1LWX PDB:1MN7 PDB:1MN9 PDB:1NCL
PDB:1NDC PDB:1NDK PDB:1NDP PDB:1NPK PDB:1NSP PDB:1PAE PDB:1S5Z
PDB:2BEF PDB:3FKB PDBsum:1B4S PDBsum:1B99 PDBsum:1BUX PDBsum:1F3F
PDBsum:1F6T PDBsum:1HHQ PDBsum:1HIY PDBsum:1HLW PDBsum:1KDN
PDBsum:1LEO PDBsum:1LWX PDBsum:1MN7 PDBsum:1MN9 PDBsum:1NCL
PDBsum:1NDC PDBsum:1NDK PDBsum:1NDP PDBsum:1NPK PDBsum:1NSP
PDBsum:1PAE PDBsum:1S5Z PDBsum:2BEF PDBsum:3FKB
ProteinModelPortal:P22887 SMR:P22887 STRING:P22887
SWISS-2DPAGE:P22887 PRIDE:P22887 EnsemblProtists:DDB0185051
EnsemblProtists:DDB0238334 GeneID:8618831 GeneID:8619145
KEGG:ddi:DDB_G0273069 KEGG:ddi:DDB_G0273805 OMA:DERTFIM
ProtClustDB:PTZ00093 EvolutionaryTrace:P22887 GO:GO:0006186
GO:GO:0006187 GO:GO:0048550 Uniprot:P22887
Length = 155
Score = 234 (87.4 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/128 (36%), Positives = 73/128 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D + + +VGEI RYEK G ++ +K+ E Y+ HK RPFF LV
Sbjct: 10 RTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLV 69
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+F+ SGPV V EG+ + R++IG T+P+ +A G+IR DF + +NI+H +
Sbjct: 70 SFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVES 129
Query: 542 RAKQLQKW 549
+++ W
Sbjct: 130 ANREIALW 137
>DICTYBASE|DDB_G0273069 [details] [associations]
symbol:ndkC-1 "NDP kinase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0009617 "response to bacterium" evidence=IEP]
[GO:0030141 "secretory granule" evidence=IDA] [GO:0030036 "actin
cytoskeleton organization" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IDA] [GO:0006414 "translational elongation" evidence=IDA]
[GO:0005840 "ribosome" evidence=IDA] [GO:0009142 "nucleoside
triphosphate biosynthetic process" evidence=IDA] [GO:0006187 "dGTP
biosynthetic process from dGDP" evidence=IDA] [GO:0006186 "dGDP
phosphorylation" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA;IDA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] [GO:0006165 "nucleoside diphosphate
phosphorylation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0009117 "nucleotide metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0050765
"negative regulation of phagocytosis" evidence=IMP] [GO:0048550
"negative regulation of pinocytosis" evidence=IMP] [GO:0045920
"negative regulation of exocytosis" evidence=IMP] [GO:0016049 "cell
growth" evidence=IMP] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
dictyBase:DDB_G0273805 dictyBase:DDB_G0273069 GO:GO:0005886
GO:GO:0005524 GO:GO:0045335 GO:GO:0009617 GO:GO:0005856
GO:GO:0046872 GO:GO:0030036 GO:GO:0016049 GO:GO:0030141
GO:GO:0007186 GenomeReviews:CM000151_GR GO:GO:0005840
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0050765 GO:GO:0006414
GO:GO:0006183 GO:GO:0045920 GO:GO:0004550 eggNOG:COG0105 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 EMBL:J05457
EMBL:L23067 PIR:A49547 RefSeq:XP_644519.1 RefSeq:XP_644731.1
PDB:1B4S PDB:1B99 PDB:1BUX PDB:1F3F PDB:1F6T PDB:1HHQ PDB:1HIY
PDB:1HLW PDB:1KDN PDB:1LEO PDB:1LWX PDB:1MN7 PDB:1MN9 PDB:1NCL
PDB:1NDC PDB:1NDK PDB:1NDP PDB:1NPK PDB:1NSP PDB:1PAE PDB:1S5Z
PDB:2BEF PDB:3FKB PDBsum:1B4S PDBsum:1B99 PDBsum:1BUX PDBsum:1F3F
PDBsum:1F6T PDBsum:1HHQ PDBsum:1HIY PDBsum:1HLW PDBsum:1KDN
PDBsum:1LEO PDBsum:1LWX PDBsum:1MN7 PDBsum:1MN9 PDBsum:1NCL
PDBsum:1NDC PDBsum:1NDK PDBsum:1NDP PDBsum:1NPK PDBsum:1NSP
PDBsum:1PAE PDBsum:1S5Z PDBsum:2BEF PDBsum:3FKB
ProteinModelPortal:P22887 SMR:P22887 STRING:P22887
SWISS-2DPAGE:P22887 PRIDE:P22887 EnsemblProtists:DDB0185051
EnsemblProtists:DDB0238334 GeneID:8618831 GeneID:8619145
KEGG:ddi:DDB_G0273069 KEGG:ddi:DDB_G0273805 OMA:DERTFIM
ProtClustDB:PTZ00093 EvolutionaryTrace:P22887 GO:GO:0006186
GO:GO:0006187 GO:GO:0048550 Uniprot:P22887
Length = 155
Score = 234 (87.4 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/128 (36%), Positives = 73/128 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D + + +VGEI RYEK G ++ +K+ E Y+ HK RPFF LV
Sbjct: 10 RTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLV 69
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+F+ SGPV V EG+ + R++IG T+P+ +A G+IR DF + +NI+H +
Sbjct: 70 SFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVES 129
Query: 542 RAKQLQKW 549
+++ W
Sbjct: 130 ANREIALW 137
>UNIPROTKB|F1PYM1 [details] [associations]
symbol:NME3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005739 GO:GO:0005524
GO:GO:0006183 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919 OMA:RLVKYMS
GeneTree:ENSGT00700000104244 EMBL:AAEX03004641
Ensembl:ENSCAFT00000030995 Uniprot:F1PYM1
Length = 161
Score = 233 (87.1 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 48/128 (37%), Positives = 74/128 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D ++ +VGEI RYE+ G K++A + + S + + Y+ + RPF+ LV
Sbjct: 21 RTFLAVKPDGGQRRLVGEILRRYERKGFKLVALKLVQASDELLREHYAGLRERPFYGGLV 80
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
++M SGPV V +G D ++ R LIG TDP AA GTIR DF + KN++H +
Sbjct: 81 DYMRSGPVVAMVWQGLDVVRASRALIGATDPADAAPGTIRGDFCVEVGKNVIHGSDLVES 140
Query: 542 RAKQLQKW 549
+++ W
Sbjct: 141 ARREIALW 148
>UNIPROTKB|J9P3S5 [details] [associations]
symbol:J9P3S5 "Nucleoside diphosphate kinase" species:9615
"Canis lupus familiaris" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:AAEX03005778
Ensembl:ENSCAFT00000025126 OMA:VHASEEH Uniprot:J9P3S5
Length = 152
Score = 233 (87.1 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 49/137 (35%), Positives = 82/137 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++N+VGEI R E+ G +IA + + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRNLVGEIIKRLEQKGFCLIAMKLIQASEDLLKEHYIDLKDRPFFAGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG +A+K R+++G+T+P ++ GTIR DF + +N++H +
Sbjct: 66 KYMQSGPVVATVWEGLNAVKTGRVMLGETNPGESKPGTIRGDFCIQVGRNVIHGSDSVES 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 126 AEKEIGLWFQPEELVDY 142
>UNIPROTKB|F1P3E1 [details] [associations]
symbol:NME3 "Nucleoside diphosphate kinase" species:9031
"Gallus gallus" [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004550 "nucleoside diphosphate
kinase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005739 GO:GO:0005524
GO:GO:0006183 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 OMA:RLVKYMS
GeneTree:ENSGT00700000104244 EMBL:AADN02049428 IPI:IPI00581010
Ensembl:ENSGALT00000003537 Uniprot:F1P3E1
Length = 158
Score = 232 (86.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 44/128 (34%), Positives = 77/128 (60%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++++VGEI R+E+ G K++ + + S+ +++ Y ++RPF+ LV
Sbjct: 12 RTFIAIKPDGVQRHLVGEIVRRFERKGFKLVGLKLLQASEELLKEHYIALQDRPFYARLV 71
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D ++ R +IG+T+P ++ GTIR DF + KN++H +
Sbjct: 72 KYMSSGPVVAMVWQGLDVVRMARTMIGETNPAESRPGTIRGDFCIEVGKNVIHGSDSVES 131
Query: 542 RAKQLQKW 549
K++ W
Sbjct: 132 AQKEISLW 139
>UNIPROTKB|Q3T0Q4 [details] [associations]
symbol:NME2 "Nucleoside diphosphate kinase B" species:9913
"Bos taurus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004673 "protein
histidine kinase activity" evidence=IEA] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0043066 GO:GO:0046872 GO:GO:0030027
GO:GO:0001726 GO:GO:0004673 GO:GO:0050679 GO:GO:0045618
GO:GO:0006183 GO:GO:0004550 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 OrthoDB:EOG4S1T8G EMBL:BC102300 IPI:IPI00903886
RefSeq:NP_001069844.1 UniGene:Bt.64945 HSSP:P22392
ProteinModelPortal:Q3T0Q4 SMR:Q3T0Q4 STRING:Q3T0Q4 PRIDE:Q3T0Q4
GeneID:615447 KEGG:bta:615447 CTD:4831 InParanoid:Q3T0Q4
NextBio:20899623 Uniprot:Q3T0Q4
Length = 152
Score = 232 (86.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 46/128 (35%), Positives = 76/128 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A + S+ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQASEELLKQHYIDLKDRPFFPGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKS 125
Query: 542 RAKQLQKW 549
K++ W
Sbjct: 126 AEKEINLW 133
>UNIPROTKB|F1RG17 [details] [associations]
symbol:NME3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA]
HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005739 GO:GO:0005524 GO:GO:0006183
GO:GO:0004550 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 CTD:4832 OMA:RLVKYMS
GeneTree:ENSGT00700000104244 EMBL:CU929968 RefSeq:NP_001231378.1
UniGene:Ssc.16567 Ensembl:ENSSSCT00000008785 GeneID:100514398
KEGG:ssc:100514398 Uniprot:F1RG17
Length = 170
Score = 232 (86.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 45/128 (35%), Positives = 75/128 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +VGEI R+E+ G K++A + + S+ + + Y+ + RPF+ LV
Sbjct: 24 RTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLV 83
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D ++ R LIG T+P+ A GTIR DF + KN++H +
Sbjct: 84 KYMGSGPVVAMVWQGLDVVRASRALIGATNPVDATPGTIRGDFCIEVGKNVIHGSDSVES 143
Query: 542 RAKQLQKW 549
+++ W
Sbjct: 144 ARREIALW 151
>MGI|MGI:97355 [details] [associations]
symbol:Nme1 "NME/NM23 nucleoside diphosphate kinase 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=ISO]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=ISO] [GO:0002762 "negative regulation of
myeloid leukocyte differentiation" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0004536
"deoxyribonuclease activity" evidence=ISO] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=ISO] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005882 "intermediate filament" evidence=ISO] [GO:0006165
"nucleoside diphosphate phosphorylation" evidence=ISO] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007595
"lactation" evidence=IMP] [GO:0009117 "nucleotide metabolic
process" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010976 "positive regulation of
neuron projection development" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0019215 "intermediate
filament binding" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030879
"mammary gland development" evidence=IMP] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0043015 "gamma-tubulin binding"
evidence=ISO] [GO:0043388 "positive regulation of DNA binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=ISO] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 MGI:MGI:97355 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0048471
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0042493
GO:GO:0046872 GO:GO:0006897 GO:GO:0005882 GO:GO:0030027
GO:GO:0001726 GO:GO:0051591 GO:GO:0007595 GO:GO:0050679
GO:GO:0045618 GO:GO:0006183 GO:GO:0004550 GO:GO:0002762
eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:ARQMMGK
HOVERGEN:HBG000423 CTD:4830 EMBL:M35970 EMBL:M65037 EMBL:U85511
EMBL:AF033377 EMBL:BC005629 IPI:IPI00131459 PIR:A46557
RefSeq:NP_032730.1 UniGene:Mm.439702 ProteinModelPortal:P15532
SMR:P15532 IntAct:P15532 STRING:P15532 PhosphoSite:P15532
REPRODUCTION-2DPAGE:P15532 SWISS-2DPAGE:P15532 PaxDb:P15532
PRIDE:P15532 Ensembl:ENSMUST00000135884 GeneID:18102 KEGG:mmu:18102
InParanoid:P15532 ChiTaRS:NME1 NextBio:293271 Bgee:P15532
Genevestigator:P15532 GermOnline:ENSMUSG00000037601 Uniprot:P15532
Length = 152
Score = 232 (86.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 45/128 (35%), Positives = 77/128 (60%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++ + S++ +++ Y+ K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQASEDLLKEHYTDLKDRPFFTGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKS 125
Query: 542 RAKQLQKW 549
K++ W
Sbjct: 126 AEKEISLW 133
>FB|FBgn0000150 [details] [associations]
symbol:awd "abnormal wing discs" species:7227 "Drosophila
melanogaster" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=ISS;NAS;IMP;IDA] [GO:0007017 "microtubule-based process"
evidence=IMP] [GO:0006165 "nucleoside diphosphate phosphorylation"
evidence=ISS;IMP] [GO:0008017 "microtubule binding" evidence=IDA]
[GO:0005874 "microtubule" evidence=NAS;IDA] [GO:0007067 "mitosis"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0016301
"kinase activity" evidence=IDA] [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IMP;IDA] [GO:0018105 "peptidyl-serine phosphorylation"
evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0006183 "GTP
biosynthetic process" evidence=ISS;NAS] [GO:0006241 "CTP
biosynthetic process" evidence=ISS;NAS] [GO:0006228 "UTP
biosynthetic process" evidence=ISS;NAS] [GO:0007427 "epithelial
cell migration, open tracheal system" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IEP;IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0016334
"establishment or maintenance of polarity of follicular epithelium"
evidence=IMP] [GO:0034332 "adherens junction organization"
evidence=IMP] [GO:0035152 "regulation of tube architecture, open
tracheal system" evidence=IMP] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005525 EMBL:AE014297
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0007067
GO:GO:0000287 GO:GO:0046777 GO:GO:0018105 GO:GO:0034332
GO:GO:0008017 GO:GO:0007427 GO:GO:0007017 GO:GO:0005880
GO:GO:0016334 GO:GO:0035152 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 EMBL:X13107 EMBL:AY113576
PIR:S01908 RefSeq:NP_476761.2 UniGene:Dm.6904 PDB:1NDL PDB:1NSQ
PDBsum:1NDL PDBsum:1NSQ ProteinModelPortal:P08879 SMR:P08879
DIP:DIP-20572N MINT:MINT-936330 STRING:P08879 PaxDb:P08879
PRIDE:P08879 GeneID:43739 KEGG:dme:Dmel_CG2210 CTD:43739
FlyBase:FBgn0000150 InParanoid:P08879 OrthoDB:EOG4XGXG7 ChiTaRS:awd
EvolutionaryTrace:P08879 GenomeRNAi:43739 NextBio:835532
Bgee:P08879 GermOnline:CG2210 Uniprot:P08879
Length = 153
Score = 231 (86.4 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 48/131 (36%), Positives = 76/131 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF ++ D +++ +VG+I R+E+ G K++A SK +EK Y+ RPFF LV
Sbjct: 7 RTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLV 66
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
N+M SGPV V EG + +K R ++G T+P + GTIR DF + +NI+H +
Sbjct: 67 NYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVES 126
Query: 542 RAKQLQKWIHK 552
K++ W ++
Sbjct: 127 AEKEIALWFNE 137
>UNIPROTKB|A5PK70 [details] [associations]
symbol:NME3 "Nucleoside diphosphate kinase" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005739 GO:GO:0005524 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 CTD:4832
HOVERGEN:HBG000423 OMA:RLVKYMS OrthoDB:EOG45757V
GeneTree:ENSGT00700000104244 EMBL:DAAA02057304 EMBL:BC142382
IPI:IPI00705383 RefSeq:NP_001092456.1 UniGene:Bt.1140 SMR:A5PK70
STRING:A5PK70 Ensembl:ENSBTAT00000022012 GeneID:515663
KEGG:bta:515663 InParanoid:A5PK70 NextBio:20871947 Uniprot:A5PK70
Length = 169
Score = 231 (86.4 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 46/128 (35%), Positives = 74/128 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +VGEI R+E+ G K++A + + S+ + + Y+ + RPFF LV
Sbjct: 23 RTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFFGRLV 82
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D ++ R LIG T+P A GTIR DF + KN++H +
Sbjct: 83 KYMGSGPVVAMVWQGLDVVRASRALIGATNPADATPGTIRGDFCIEVGKNVIHGSDSVES 142
Query: 542 RAKQLQKW 549
+++ W
Sbjct: 143 ARREIALW 150
>UNIPROTKB|P52175 [details] [associations]
symbol:NME1-2 "Nucleoside diphosphate kinase A 2"
species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0007399 GO:GO:0030154
GO:GO:0046872 GO:GO:0006897 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 UniGene:Bt.5340 EMBL:X92957 IPI:IPI00711386
PDB:1BE4 PDBsum:1BE4 ProteinModelPortal:P52175 SMR:P52175
STRING:P52175 PRIDE:P52175 EvolutionaryTrace:P52175 Uniprot:P52175
Length = 152
Score = 231 (86.4 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 45/128 (35%), Positives = 77/128 (60%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ ++GEI R+E+ G +++A + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLMGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 125
Query: 542 RAKQLQKW 549
K++ W
Sbjct: 126 AEKEIALW 133
>UNIPROTKB|Q6XI71 [details] [associations]
symbol:awd "Nucleoside diphosphate kinase" species:7245
"Drosophila yakuba" [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005880
"nuclear microtubule" evidence=ISS] [GO:0016301 "kinase activity"
evidence=ISS] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 GO:GO:0000287 GO:GO:0005880
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OrthoDB:EOG4XGXG7
EMBL:AY231961 ProteinModelPortal:Q6XI71 SMR:Q6XI71 STRING:Q6XI71
FlyBase:FBgn0067997 Uniprot:Q6XI71
Length = 150
Score = 231 (86.4 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 48/131 (36%), Positives = 76/131 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF ++ D +++ +VG+I R+E+ G K++A SK +EK Y+ RPFF LV
Sbjct: 4 RTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLV 63
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
N+M SGPV V EG + +K R ++G T+P + GTIR DF + +NI+H +
Sbjct: 64 NYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVES 123
Query: 542 RAKQLQKWIHK 552
K++ W ++
Sbjct: 124 AEKEIALWFNE 134
>RGD|619879 [details] [associations]
symbol:Nme3 "NME/NM23 nucleoside diphosphate kinase 3"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00451 InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 RGD:619879 GO:GO:0005524
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 CTD:4832 HOVERGEN:HBG000423 OrthoDB:EOG45757V
UniGene:Rn.8785 HSSP:P15531 EMBL:AY017337 IPI:IPI00198988
RefSeq:NP_445959.1 ProteinModelPortal:Q99NI1 SMR:Q99NI1
STRING:Q99NI1 PRIDE:Q99NI1 GeneID:85269 KEGG:rno:85269
UCSC:RGD:619879 InParanoid:Q99NI1 NextBio:617422
ArrayExpress:Q99NI1 Genevestigator:Q99NI1 Uniprot:Q99NI1
Length = 169
Score = 231 (86.4 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 46/131 (35%), Positives = 74/131 (56%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +VGEI R+E+ G K++A + + S+ + + Y + RPF+ LV
Sbjct: 23 RTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELRERPFYSRLV 82
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D ++ R LIG TDP A GTIR DF + KN++H +
Sbjct: 83 KYMGSGPVVAMVWQGLDVVRASRALIGATDPGDATPGTIRGDFCVEVGKNVIHGSDSVES 142
Query: 542 RAKQLQKWIHK 552
+++ W +
Sbjct: 143 AQREIALWFRE 153
>RGD|70497 [details] [associations]
symbol:Nme1 "NME/NM23 nucleoside diphosphate kinase 1"
species:10116 "Rattus norvegicus" [GO:0000287 "magnesium ion
binding" evidence=IEA;ISO] [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0002762
"negative regulation of myeloid leukocyte differentiation"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0004536 "deoxyribonuclease activity"
evidence=IEA;ISO] [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006165 "nucleoside
diphosphate phosphorylation" evidence=IDA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0007595
"lactation" evidence=ISO] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0010976 "positive regulation of neuron
projection development" evidence=IMP] [GO:0014075 "response to amine
stimulus" evidence=IEP] [GO:0016020 "membrane" evidence=IDA]
[GO:0019215 "intermediate filament binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0021766 "hippocampus development"
evidence=IEP] [GO:0030879 "mammary gland development" evidence=ISO]
[GO:0033574 "response to testosterone stimulus" evidence=IEP]
[GO:0035690 "cellular response to drug" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0042802 "identical protein
binding" evidence=IEA;ISO] [GO:0043015 "gamma-tubulin binding"
evidence=IDA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA;ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA;ISO] [GO:0051591 "response to cAMP"
evidence=IEP] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEP] [GO:0071398 "cellular response to fatty acid"
evidence=IEP] [GO:0005882 "intermediate filament" evidence=IDA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
RGD:70497 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0043066
GO:GO:0010976 GO:GO:0016020 GO:GO:0071333 GO:GO:0046872
GO:GO:0006897 GO:GO:0030027 GO:GO:0071398 GO:GO:0035690
GO:GO:0003697 GO:GO:0001726 GO:GO:0033574 GO:GO:0010629
GO:GO:0051591 GO:GO:0007595 GO:GO:0000977 GO:GO:0014075
GO:GO:0043015 GO:GO:0050679 GO:GO:0045618 GO:GO:0006183
GO:GO:0004550 GO:GO:0002762 eggNOG:COG0105 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
OMA:ARQMMGK HOVERGEN:HBG000423 GeneTree:ENSGT00700000104244
OrthoDB:EOG4S1T8G CTD:4830 EMBL:D13374 IPI:IPI00194404 PIR:A45208
RefSeq:NP_612557.1 UniGene:Rn.6236 ProteinModelPortal:Q05982
SMR:Q05982 IntAct:Q05982 STRING:Q05982 PhosphoSite:Q05982
PRIDE:Q05982 Ensembl:ENSRNOT00000003658 GeneID:191575
KEGG:rno:191575 InParanoid:Q05982 SABIO-RK:Q05982 NextBio:622659
ArrayExpress:Q05982 Genevestigator:Q05982
GermOnline:ENSRNOG00000002693 Uniprot:Q05982
Length = 152
Score = 231 (86.4 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 46/137 (33%), Positives = 79/137 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++ + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQASEDLLKEHYIDLKDRPFFSGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 126 AEKEISLWFQPEELVDY 142
>TAIR|locus:2138101 [details] [associations]
symbol:AT4G23900 species:3702 "Arabidopsis thaliana"
[GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006165 "nucleoside diphosphate phosphorylation" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005739 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005758 GO:GO:0046872
GO:GO:0008270 EMBL:AL078468 EMBL:AL161560 GO:GO:0009543
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 ProtClustDB:PLN02619 EMBL:AB044970 EMBL:AK117895
EMBL:AY087800 IPI:IPI00542543 PIR:T08909 RefSeq:NP_567690.1
UniGene:At.32397 ProteinModelPortal:Q8LAH8 SMR:Q8LAH8 STRING:Q8LAH8
PaxDb:Q8LAH8 PRIDE:Q8LAH8 EnsemblPlants:AT4G23900.1 GeneID:828490
KEGG:ath:AT4G23900 GeneFarm:1972 TAIR:At4g23900 InParanoid:Q8LAH8
PhylomeDB:Q8LAH8 Genevestigator:Q8LAH8 GermOnline:AT4G23900
Uniprot:Q8LAH8
Length = 237
Score = 231 (86.4 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 53/129 (41%), Positives = 73/129 (56%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ ++ EI R+E+ G K++ + SK +K Y K RPFF L
Sbjct: 89 RTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNGLC 148
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
NF+ SGPV V EGE I+ R LIG TDP K+ GTIR D A + +NI+H + P
Sbjct: 149 NFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHG-SDGPE 207
Query: 542 RAK-QLQKW 549
AK ++ W
Sbjct: 208 TAKDEISLW 216
>UNIPROTKB|O57535 [details] [associations]
symbol:O57535 "Nucleoside diphosphate kinase" species:9031
"Gallus gallus" [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0001726 "ruffle" evidence=ISS] [GO:0030027 "lamellipodium"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0045618 "positive regulation of keratinocyte differentiation"
evidence=ISS] [GO:0045682 "regulation of epidermis development"
evidence=ISS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=ISS] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0043066 GO:GO:0046872 GO:GO:0030027
GO:GO:0001726 GO:GO:0050679 GO:GO:0045618 GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 GeneTree:ENSGT00700000104244 OrthoDB:EOG4S1T8G
HSSP:P22392 CTD:4831 OMA:RIIGATR EMBL:AF043542 IPI:IPI00601877
RefSeq:NP_990378.1 UniGene:Gga.2020 ProteinModelPortal:O57535
SMR:O57535 IntAct:O57535 STRING:O57535 PRIDE:O57535
Ensembl:ENSGALT00000034721 GeneID:395916 KEGG:gga:395916
InParanoid:O57535 NextBio:20815981 Uniprot:O57535
Length = 153
Score = 230 (86.0 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 46/137 (33%), Positives = 79/137 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A S++ +++ Y K+RPF+ LV
Sbjct: 7 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFVHASEDLLKQHYIDLKDRPFYPGLV 66
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 67 KYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 126
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 127 AQKEISLWFKPAELIDY 143
>UNIPROTKB|Q2EN76 [details] [associations]
symbol:NME2 "Nucleoside diphosphate kinase B" species:9823
"Sus scrofa" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004673 "protein
histidine kinase activity" evidence=IEA] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0043066 GO:GO:0046872 GO:GO:0030027
GO:GO:0001726 GO:GO:0004673 GO:GO:0050679 GO:GO:0045618
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 HOVERGEN:HBG000423 GeneTree:ENSGT00700000104244
OrthoDB:EOG4S1T8G CTD:4831 EMBL:DQ372081 RefSeq:NP_001038075.1
UniGene:Ssc.2257 HSSP:P22887 ProteinModelPortal:Q2EN76 SMR:Q2EN76
STRING:Q2EN76 PRIDE:Q2EN76 Ensembl:ENSSSCT00000019150 GeneID:733683
KEGG:ssc:733683 OMA:RIIGATR Uniprot:Q2EN76
Length = 152
Score = 230 (86.0 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 45/128 (35%), Positives = 76/128 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +VGEI R+E+ G +++A + S+ +++ Y K+RPFF LV
Sbjct: 6 RTFIAVKPDGVQRGLVGEIIKRFEQKGFRLVALKFLQASEELLKQHYIDLKDRPFFPGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMGSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKS 125
Query: 542 RAKQLQKW 549
K++ W
Sbjct: 126 AEKEISLW 133
>UNIPROTKB|G3V816 [details] [associations]
symbol:Nme3 "Nucleoside diphosphate kinase" species:10116
"Rattus norvegicus" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 RGD:619879 GO:GO:0005524 EMBL:CH473948
GO:GO:0006183 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 OMA:RLVKYMS
GeneTree:ENSGT00700000104244 UniGene:Rn.8785
ProteinModelPortal:G3V816 Ensembl:ENSRNOT00000021650 Uniprot:G3V816
Length = 169
Score = 230 (86.0 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 46/131 (35%), Positives = 74/131 (56%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +VGEI R+E+ G K++A + + S+ + + Y + RPF+ LV
Sbjct: 23 RTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELRERPFYSRLV 82
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D ++ R LIG TDP A GTIR DF + KN++H +
Sbjct: 83 KYMGSGPVVAMVWQGLDVVRASRALIGATDPGDAMPGTIRGDFCVEVGKNVIHGSDSVES 142
Query: 542 RAKQLQKWIHK 552
+++ W +
Sbjct: 143 AQREIALWFRE 153
>TAIR|locus:2075306 [details] [associations]
symbol:HRS1 "Histidyl-tRNA synthetase 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR002314 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00587
PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154 HAMAP:MF_00127
GO:GO:0005739 GO:GO:0005524 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 EMBL:AL355775 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
BRENDA:6.1.1.21 EMBL:AF020715 EMBL:AY056233 EMBL:AY117252
IPI:IPI00521949 PIR:T49251 RefSeq:NP_190196.1 UniGene:At.22106
HSSP:P60906 ProteinModelPortal:O82413 SMR:O82413 STRING:O82413
PaxDb:O82413 PRIDE:O82413 EnsemblPlants:AT3G46100.1 GeneID:823753
KEGG:ath:AT3G46100 TAIR:At3g46100 HOGENOM:HOG000018073
InParanoid:O82413 OMA:ENTQKGR PhylomeDB:O82413 ProtClustDB:PLN02530
ArrayExpress:O82413 Genevestigator:O82413 Uniprot:O82413
Length = 486
Score = 250 (93.1 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 91/324 (28%), Positives = 153/324 (47%)
Query: 867 SGEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYS-GPMFR 925
+GEE ++ ++Y F D N ++LRPE T S+ R VI+ P + W++ G +R
Sbjct: 120 AGEE---IRDQLYCFEDRGNR-RVALRPELTPSLARLVIQKGKSVSLPLK-WFAIGQCWR 174
Query: 926 HERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL--KNICLELNSIGNFN 983
+ER GR R+ YQ ++ IG P +AELI +K + + ++ +++S
Sbjct: 175 YERMTRGRRREHYQWNMDIIGVPQVTAEAELISSIVTFFKRIGITASDVGFKVSSRKVLQ 234
Query: 984 ER-KKYCI--DLINY--IKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKL 1038
E KKY + DL I K K ++IK L + S++ I + + + + K
Sbjct: 235 ELLKKYGVPEDLFGRVCIIIDKIEKIPIDEIKKELGFTGI----SEDAIEQLLQVLSVKS 290
Query: 1039 LDYLEK---------DSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKL 1089
LD LE L + + + Y+ + + +VRG+ YY VFE D+
Sbjct: 291 LDDLEDIIGGAGEAIADLKQLFSLAEKFGYSEW-IQFDASVVRGLAYYTGIVFEGF-DRK 348
Query: 1090 GSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHV 1149
G +ICGGGRYD L+ + PA GF G ++EL+K+ ++ + + + +
Sbjct: 349 GKLRAICGGGRYDRLLSTYGGDDFPACGFGFGDAVIVELLKEKDLLPELGQEVENIVCAL 408
Query: 1150 GKEAELKAFVLSENLRTLGLKVIL 1173
K+ + A ++ LR G V L
Sbjct: 409 DKDLQGAAATVATALRDKGQTVDL 432
>UNIPROTKB|Q13232 [details] [associations]
symbol:NME3 "Nucleoside diphosphate kinase 3" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=TAS] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005739 GO:GO:0005524 GO:GO:0006915
GO:GO:0006917 GO:GO:0046872 EMBL:AE006639 GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 EMBL:U29656
EMBL:BC000250 IPI:IPI00012315 PIR:I39074 RefSeq:NP_002504.2
UniGene:Hs.514065 PDB:1ZS6 PDBsum:1ZS6 ProteinModelPortal:Q13232
SMR:Q13232 IntAct:Q13232 MINT:MINT-1429907 STRING:Q13232
PhosphoSite:Q13232 DMDM:21264477 PaxDb:Q13232 PeptideAtlas:Q13232
PRIDE:Q13232 DNASU:4832 Ensembl:ENST00000219302 GeneID:4832
KEGG:hsa:4832 UCSC:uc002cmm.3 CTD:4832 GeneCards:GC16M001820
HGNC:HGNC:7851 MIM:601817 neXtProt:NX_Q13232 PharmGKB:PA31656
HOVERGEN:HBG000423 InParanoid:Q13232 OMA:RLVKYMS OrthoDB:EOG45757V
PhylomeDB:Q13232 ChEMBL:CHEMBL4871 EvolutionaryTrace:Q13232
GenomeRNAi:4832 NextBio:18622 ArrayExpress:Q13232 Bgee:Q13232
CleanEx:HS_NME3 Genevestigator:Q13232 GermOnline:ENSG00000103024
Uniprot:Q13232
Length = 169
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 45/128 (35%), Positives = 74/128 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +VGEI R+E+ G K++A + + S+ + + Y+ + RPF+ LV
Sbjct: 23 RTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLV 82
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D ++ R LIG T+P A GTIR DF + KN++H +
Sbjct: 83 KYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVES 142
Query: 542 RAKQLQKW 549
+++ W
Sbjct: 143 ARREIALW 150
>TIGR_CMR|BA_1536 [details] [associations]
symbol:BA_1536 "nucleoside diphosphate kinase, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=ISS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=ISS] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 OMA:FRVVAMK
ProtClustDB:PRK00668 RefSeq:NP_843987.1 RefSeq:YP_018159.1
RefSeq:YP_027694.1 PDB:2VU5 PDBsum:2VU5 ProteinModelPortal:Q81SV8
SMR:Q81SV8 DNASU:1083673 EnsemblBacteria:EBBACT00000008290
EnsemblBacteria:EBBACT00000015924 EnsemblBacteria:EBBACT00000023252
GeneID:1083673 GeneID:2817489 GeneID:2852130 KEGG:ban:BA_1536
KEGG:bar:GBAA_1536 KEGG:bat:BAS1425
BioCyc:BANT260799:GJAJ-1499-MONOMER
BioCyc:BANT261594:GJ7F-1561-MONOMER EvolutionaryTrace:Q81SV8
Uniprot:Q81SV8
Length = 148
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 45/140 (32%), Positives = 83/140 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
+TF ++ D +++ +GEI R+EK G +++ A + +++ + Y+ H +PFF LV
Sbjct: 3 KTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELV 62
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+F+ SGPVF V +GE + R ++G T P +AA GTIR DF ++ KNI+H +
Sbjct: 63 DFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLES 122
Query: 542 RAKQLQKWIHKFGVSDFNKM 561
+++ + + + D++K+
Sbjct: 123 AEREIGIFFKEEELVDYSKL 142
>WB|WBGene00009119 [details] [associations]
symbol:ndk-1 species:6239 "Caenorhabditis elegans"
[GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006165 "nucleoside
diphosphate phosphorylation" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0002119 GO:GO:0040035 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 HSSP:P22392 OMA:IARFERK EMBL:Z79754
PIR:T21354 RefSeq:NP_492761.1 ProteinModelPortal:Q93576 SMR:Q93576
DIP:DIP-24630N IntAct:Q93576 MINT:MINT-229026 STRING:Q93576
World-2DPAGE:0020:Q93576 PaxDb:Q93576 EnsemblMetazoa:F25H2.5.1
EnsemblMetazoa:F25H2.5.2 EnsemblMetazoa:F25H2.5.3 GeneID:172939
KEGG:cel:CELE_F25H2.5 UCSC:F25H2.5.3 CTD:172939 WormBase:F25H2.5
InParanoid:Q93576 NextBio:877605 Uniprot:Q93576
Length = 153
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 47/137 (34%), Positives = 78/137 (56%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D + + +VG+I R+E+ G K++A SK +E Y K++PFF +L+
Sbjct: 6 RTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSLI 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D +K+ R ++G T+P+ +A GTIR DF +NI H +
Sbjct: 66 EYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVDS 125
Query: 542 RAKQLQKWIHKFGVSDF 558
+++ W + ++D+
Sbjct: 126 ANREIAHWFKQEEINDY 142
>UNIPROTKB|Q93576 [details] [associations]
symbol:ndk-1 "Protein NDK-1" species:6239 "Caenorhabditis
elegans" [GO:0042802 "identical protein binding" evidence=IPI]
HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0002119 GO:GO:0040035 GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 HSSP:P22392 OMA:IARFERK EMBL:Z79754
PIR:T21354 RefSeq:NP_492761.1 ProteinModelPortal:Q93576 SMR:Q93576
DIP:DIP-24630N IntAct:Q93576 MINT:MINT-229026 STRING:Q93576
World-2DPAGE:0020:Q93576 PaxDb:Q93576 EnsemblMetazoa:F25H2.5.1
EnsemblMetazoa:F25H2.5.2 EnsemblMetazoa:F25H2.5.3 GeneID:172939
KEGG:cel:CELE_F25H2.5 UCSC:F25H2.5.3 CTD:172939 WormBase:F25H2.5
InParanoid:Q93576 NextBio:877605 Uniprot:Q93576
Length = 153
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 47/137 (34%), Positives = 78/137 (56%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D + + +VG+I R+E+ G K++A SK +E Y K++PFF +L+
Sbjct: 6 RTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSLI 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D +K+ R ++G T+P+ +A GTIR DF +NI H +
Sbjct: 66 EYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVDS 125
Query: 542 RAKQLQKWIHKFGVSDF 558
+++ W + ++D+
Sbjct: 126 ANREIAHWFKQEEINDY 142
>TAIR|locus:2123421 [details] [associations]
symbol:NDPK3 "nucleoside diphosphate kinase 3"
species:3702 "Arabidopsis thaliana" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0006165 "nucleoside diphosphate
phosphorylation" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] [GO:0006228 "UTP biosynthetic process"
evidence=IEA] [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0005743 "mitochondrial
inner membrane" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006979 "response to oxidative stress"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IDA] [GO:0050897 "cobalt ion binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0019932 "second-messenger-mediated signaling"
evidence=RCA] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 GO:GO:0009536 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006979 GO:GO:0005743 GO:GO:0005758
GO:GO:0008270 GO:GO:0050897 GO:GO:0009543 EMBL:AL161518
EMBL:AF080118 EMBL:AL049525 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 EMBL:AF044265
EMBL:AY062964 EMBL:AY035184 IPI:IPI00521242 PIR:T01877
RefSeq:NP_192839.1 UniGene:At.47514 ProteinModelPortal:O49203
SMR:O49203 STRING:O49203 PaxDb:O49203 PRIDE:O49203 ProMEX:O49203
EnsemblPlants:AT4G11010.1 GeneID:826702 KEGG:ath:AT4G11010
GeneFarm:1971 TAIR:At4g11010 InParanoid:O49203 OMA:ARQMMGK
PhylomeDB:O49203 ProtClustDB:PLN02619 BioCyc:ARA:AT4G11010-MONOMER
Genevestigator:O49203 GermOnline:AT4G11010 Uniprot:O49203
Length = 238
Score = 228 (85.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 51/129 (39%), Positives = 76/129 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ ++ EI +R+E+ G K++ + SK+ +K Y K RPFF L
Sbjct: 90 RTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNGLC 149
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+F+ SGPV V EG+ I+ R LIG TDP K+ GTIR D A ++ +NI+H + P
Sbjct: 150 DFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHG-SDGPE 208
Query: 542 RAK-QLQKW 549
AK ++ W
Sbjct: 209 TAKDEISLW 217
>UNIPROTKB|E2RC20 [details] [associations]
symbol:NME1 "Nucleoside diphosphate kinase" species:9615
"Canis lupus familiaris" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:AAEX03006543
Ensembl:ENSCAFT00000027424 Uniprot:E2RC20
Length = 292
Score = 227 (85.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 45/137 (32%), Positives = 80/137 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VG+I R+E+ G +++A + S++ +++ Y K+RPF+ LV
Sbjct: 146 RTFIAIKPDGVQRGLVGDIVKRFEQKGFRLVAMKFLRASEDLLKEHYIDLKDRPFYPGLV 205
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 206 KYMHSGPVVAMVWEGLNVVKTGRMMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKS 265
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 266 AEKEISLWFKPEELVDY 282
Score = 215 (80.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 43/114 (37%), Positives = 73/114 (64%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++++VGEI R+E+ G ++IA + + S++ +++ Y K+RPFF LV
Sbjct: 31 RTFIAIKPDGVQRSLVGEIIKRFEQKGFRLIAMKLIQASEDLLKEHYIDLKDRPFFAGLV 90
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHE 535
+M SGPV V EG + +K R+++G+T+P + GTIR DF + + + H+
Sbjct: 91 KYMQSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRAMAHQ 144
>UNIPROTKB|Q50KA8 [details] [associations]
symbol:NME2 "Nucleoside diphosphate kinase B" species:9615
"Canis lupus familiaris" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004673
"protein histidine kinase activity" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0046872 GO:GO:0004673
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 HOVERGEN:HBG000423 OrthoDB:EOG4S1T8G HSSP:P22392
CTD:4831 EMBL:AB207045 RefSeq:NP_001019809.1 UniGene:Cfa.23354
ProteinModelPortal:Q50KA8 SMR:Q50KA8 STRING:Q50KA8 PRIDE:Q50KA8
GeneID:480559 KEGG:cfa:480559 InParanoid:Q50KA8 NextBio:20855562
Uniprot:Q50KA8
Length = 152
Score = 227 (85.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 45/137 (32%), Positives = 80/137 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VG+I R+E+ G +++A + S++ +++ Y K+RPF+ LV
Sbjct: 6 RTFIAIKPDGVQRGLVGDIVKRFEQKGFRLVAMKFLRASEDLLKEHYIDLKDRPFYPGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 66 KYMHSGPVVAMVWEGLNVVKTGRMMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKS 125
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 126 AEKEISLWFKPEELVDY 142
>CGD|CAL0000917 [details] [associations]
symbol:YNK1 species:5476 "Candida albicans" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006165 "nucleoside diphosphate
phosphorylation" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0006228 "UTP biosynthetic process"
evidence=IEA] [GO:0000747 "conjugation with cellular fusion"
evidence=IEA] [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
CGD:CAL0000917 GO:GO:0005886 GO:GO:0005524 EMBL:AACQ01000021
EMBL:AACQ01000022 GO:GO:0006183 GO:GO:0004550 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 RefSeq:XP_720618.1 RefSeq:XP_720745.1
ProteinModelPortal:Q5AG68 SMR:Q5AG68 STRING:Q5AG68 GeneID:3637693
GeneID:3637746 KEGG:cal:CaO19.11786 KEGG:cal:CaO19.4311
Uniprot:Q5AG68
Length = 151
Score = 226 (84.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 42/131 (32%), Positives = 80/131 (61%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ ++ I R+E+ G K++ + + +++ + Y +++PFF +L+
Sbjct: 5 RTFIAIKPDGVQRGLISSILGRFEQRGFKLVGIKLVQPTESLLRTHYEDLQSKPFFPSLL 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
++M+SGPV V EG+D +K+ R ++G T+P+++A GTIR DFA + +N+ H +
Sbjct: 65 SYMLSGPVLATVWEGKDVVKQGRAILGATNPLQSAPGTIRGDFAIDMGRNVCHGSDSVES 124
Query: 542 RAKQLQKWIHK 552
K++ W K
Sbjct: 125 ANKEIDLWFKK 135
>UNIPROTKB|F1N910 [details] [associations]
symbol:NME1 "Nucleoside diphosphate kinase" species:9031
"Gallus gallus" [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004550 "nucleoside diphosphate
kinase activity" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0004536 "deoxyribonuclease activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] HAMAP:MF_00451 InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 GO:GO:0005525
GO:GO:0005739 GO:GO:0005524 GO:GO:0000287 GO:GO:0004536
GO:GO:0050679 GO:GO:0043388 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:AADN02053603 IPI:IPI00574861
Ensembl:ENSGALT00000011825 OMA:QESWINS Uniprot:F1N910
Length = 158
Score = 226 (84.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 45/137 (32%), Positives = 78/137 (56%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G K++A + S++ + + Y K+RPF+ LV
Sbjct: 12 RTFIAIKPDGVQRGLVGEIIRRFEQKGFKLVAMKLTHASEDLLREHYIDLKDRPFYAGLV 71
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGP+ V EG + IK R+++G+T+P+ + GTIR D + +NI+H +
Sbjct: 72 QYMHSGPIVAMVWEGLNVIKTGRVMLGETNPMDSKPGTIRGDLCVQVGRNIIHGSDSLES 131
Query: 542 RAKQLQKWIHKFGVSDF 558
++ W + D+
Sbjct: 132 AEAEINLWFSPEELVDY 148
>UNIPROTKB|J9P9D9 [details] [associations]
symbol:LOC100683376 "Nucleoside diphosphate kinase"
species:9615 "Canis lupus familiaris" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:AAEX03015340
Ensembl:ENSCAFT00000025522 OMA:WIQPEEL Uniprot:J9P9D9
Length = 151
Score = 226 (84.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 47/136 (34%), Positives = 80/136 (58%)
Query: 425 TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVN 482
TF I D +++N VGEI +++ G + A + + S++ +++ Y K+RPFF LV
Sbjct: 6 TFIAIKPDGVQRNFVGEIIKCFKQKGFCLTAMKLIQASEDLLKEHYIDLKDRPFFAGLVK 65
Query: 483 FMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFR 542
+M SGPV VLEG + +K +++G+T+P+ + GTIR DF +D+NI+H +
Sbjct: 66 YMQSGPVVAMVLEGLNVVKTGLVMLGETNPVDSKPGTIRGDFCIQVDRNIIHGSDSVESA 125
Query: 543 AKQLQKWIHKFGVSDF 558
K++ WI + D+
Sbjct: 126 EKEIGLWIQPEELVDY 141
>UNIPROTKB|Q5AG68 [details] [associations]
symbol:YNK1 "Nucleoside diphosphate kinase" species:237561
"Candida albicans SC5314" [GO:0004550 "nucleoside diphosphate
kinase activity" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006165 "nucleoside diphosphate phosphorylation"
evidence=IDA] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 CGD:CAL0000917 GO:GO:0005886
GO:GO:0005524 EMBL:AACQ01000021 EMBL:AACQ01000022 GO:GO:0006183
GO:GO:0004550 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
RefSeq:XP_720618.1 RefSeq:XP_720745.1 ProteinModelPortal:Q5AG68
SMR:Q5AG68 STRING:Q5AG68 GeneID:3637693 GeneID:3637746
KEGG:cal:CaO19.11786 KEGG:cal:CaO19.4311 Uniprot:Q5AG68
Length = 151
Score = 226 (84.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 42/131 (32%), Positives = 80/131 (61%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ ++ I R+E+ G K++ + + +++ + Y +++PFF +L+
Sbjct: 5 RTFIAIKPDGVQRGLISSILGRFEQRGFKLVGIKLVQPTESLLRTHYEDLQSKPFFPSLL 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
++M+SGPV V EG+D +K+ R ++G T+P+++A GTIR DFA + +N+ H +
Sbjct: 65 SYMLSGPVLATVWEGKDVVKQGRAILGATNPLQSAPGTIRGDFAIDMGRNVCHGSDSVES 124
Query: 542 RAKQLQKWIHK 552
K++ W K
Sbjct: 125 ANKEIDLWFKK 135
>UNIPROTKB|P84284 [details] [associations]
symbol:ndkA "Nucleoside diphosphate kinase" species:1773
"Mycobacterium tuberculosis" [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0042025 "host cell nucleus"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=IDA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IDA] [GO:0004519 "endonuclease activity"
evidence=IDA] [GO:0004844 "uracil DNA N-glycosylase activity"
evidence=IDA] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0046777 EMBL:BX842579
GO:GO:0004518 GO:GO:0042025 GO:GO:0006183 HOGENOM:HOG000224565
GO:GO:0004550 eggNOG:COG0105 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 OMA:FRVVAMK ProtClustDB:PRK00668 PIR:C70681
RefSeq:NP_216961.1 RefSeq:NP_337006.1 RefSeq:YP_006515882.1
PDB:1K44 PDBsum:1K44 ProteinModelPortal:P84284 SMR:P84284
PRIDE:P84284 EnsemblBacteria:EBMYCT00000001389
EnsemblBacteria:EBMYCT00000072690 GeneID:13319155 GeneID:885905
GeneID:925813 KEGG:mtc:MT2521 KEGG:mtu:Rv2445c KEGG:mtv:RVBD_2445c
PATRIC:18127292 TubercuList:Rv2445c EvolutionaryTrace:P84284
Uniprot:P84284
Length = 136
Score = 225 (84.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 50/129 (38%), Positives = 74/129 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RT LI D +E+ ++GEI +R E+ GL I A ++ +S + Y+ H+ +PFF +L+
Sbjct: 4 RTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLL 63
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAK-GTIRADFAESIDKNIVHELGEMP 540
F+ SGPV ++EG AI R L G TDP++AA GTIR DFA N+VH
Sbjct: 64 EFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAE 123
Query: 541 FRAKQLQKW 549
+++ W
Sbjct: 124 SAQREIALW 132
>MGI|MGI:1930182 [details] [associations]
symbol:Nme3 "NME/NM23 nucleoside diphosphate kinase 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006165 "nucleoside diphosphate
phosphorylation" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] [GO:0006228 "UTP biosynthetic process"
evidence=IEA] [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
MGI:MGI:1930182 GO:GO:0005739 GO:GO:0005524 GO:GO:0046872
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 CTD:4832 HOVERGEN:HBG000423 OMA:RLVKYMS
OrthoDB:EOG45757V EMBL:AF153449 EMBL:AF288689 EMBL:AF288691
EMBL:AK007399 EMBL:BC028503 IPI:IPI00125450 RefSeq:NP_062704.2
UniGene:Mm.430765 ProteinModelPortal:Q9WV85 SMR:Q9WV85
STRING:Q9WV85 PhosphoSite:Q9WV85 PaxDb:Q9WV85 PRIDE:Q9WV85
Ensembl:ENSMUST00000024978 GeneID:79059 KEGG:mmu:79059
UCSC:uc008ayz.2 GeneTree:ENSGT00700000104244 InParanoid:Q9WV85
NextBio:349845 Bgee:Q9WV85 CleanEx:MM_NME3 Genevestigator:Q9WV85
GermOnline:ENSMUSG00000073435 Uniprot:Q9WV85
Length = 169
Score = 225 (84.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 45/131 (34%), Positives = 73/131 (55%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +VGEI R+E+ G K++A + + S+ + + Y + +PF+ LV
Sbjct: 23 RTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELREKPFYSRLV 82
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V +G D + R LIG TDP A GTIR DF + KN++H +
Sbjct: 83 KYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGKNVIHGSDSVES 142
Query: 542 RAKQLQKWIHK 552
+++ W +
Sbjct: 143 AHREIALWFRE 153
>POMBASE|SPAC806.07 [details] [associations]
symbol:ndk1 "nucleoside diphosphate kinase Ndk1"
species:4896 "Schizosaccharomyces pombe" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IMP] [GO:0005524 "ATP
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006183 "GTP biosynthetic
process" evidence=IDA] [GO:0006228 "UTP biosynthetic process"
evidence=IDA] [GO:0006241 "CTP biosynthetic process"
evidence=IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0061508 "CDP phosphorylation" evidence=IMP] InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 PomBase:SPAC806.07
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005758 GO:GO:0046872 GO:GO:0000747
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 OMA:ARQMMGK OrthoDB:EOG470XSR EMBL:D63678
PIR:T39099 RefSeq:NP_592857.1 ProteinModelPortal:P49740 SMR:P49740
STRING:P49740 PRIDE:P49740 EnsemblFungi:SPAC806.07.1 GeneID:2543111
KEGG:spo:SPAC806.07 NextBio:20804138 GermOnline:SPAC806.07
Uniprot:P49740
Length = 151
Score = 225 (84.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 42/139 (30%), Positives = 83/139 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
+TF + DA+++ ++G I +++E G K+ A S++ VE+ Y+ HK +PF++ LV
Sbjct: 5 QTFIAVKPDAVQRGLIGYIISKFELKGYKLRALKFLVPSRDLVEEHYAEHKGKPFYEKLV 64
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
FM SGPV + EG+ A+K R+++G ++P+ +A GTIR D+ + +N+ H +
Sbjct: 65 GFMASGPVCAMIWEGKQAVKTGRLMLGASNPLDSAPGTIRGDYGIDLGRNVCHGSDSIES 124
Query: 542 RAKQLQKWIHKFGVSDFNK 560
++++ W + +++
Sbjct: 125 ANREIKLWFQPSEIQVYDR 143
>UNIPROTKB|J9P4I5 [details] [associations]
symbol:J9P4I5 "Nucleoside diphosphate kinase" species:9615
"Canis lupus familiaris" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:AAEX03012713 OMA:PFFASLE
Ensembl:ENSCAFT00000006603 Uniprot:J9P4I5
Length = 154
Score = 223 (83.6 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 46/137 (33%), Positives = 81/137 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++N++GEI +E+ G ++IA + + S++ +++ Y K+RPFF +L
Sbjct: 8 RTFIAIKPDGVQRNLLGEIIKCFEQKGFRLIAMKLIQASEDLLKEHYIDLKDRPFFASLE 67
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 68 KYMQSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVES 127
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 128 VEKEIGVWFQPEELVDY 144
>UNIPROTKB|F1PEZ2 [details] [associations]
symbol:F1PEZ2 "Nucleoside diphosphate kinase" species:9615
"Canis lupus familiaris" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 OMA:LVSWADG EMBL:AAEX03004691
Ensembl:ENSCAFT00000031287 Uniprot:F1PEZ2
Length = 196
Score = 219 (82.2 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 40/129 (31%), Positives = 74/129 (57%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG++ R+E+ G K++ M + + + + Y + +PF+ +L+++M SGPV
Sbjct: 56 DGVQRRLVGDVIQRFERRGFKLVGMKMLQAPERVLAEHYHDLQRKPFYPSLISYMTSGPV 115
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
V EG + + R +IG TD +AA GTIR DF+ I +NI+H + +++Q W
Sbjct: 116 VAMVWEGPNVVCSSRTMIGHTDSAEAAPGTIRGDFSVHISRNIIHASDSVEGARREIQLW 175
Query: 550 IHKFGVSDF 558
+ D+
Sbjct: 176 FQSSELVDW 184
>ZFIN|ZDB-GENE-000210-33 [details] [associations]
symbol:nme2b.2 "non-metastatic cells 2b.2, protein
(NM23B) expressed in" species:7955 "Danio rerio" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA;IMP]
[GO:0006183 "GTP biosynthetic process" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006165 "nucleoside
diphosphate phosphorylation" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
ZFIN:ZDB-GENE-000210-33 GO:GO:0005524 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 GeneTree:ENSGT00700000104244 OrthoDB:EOG4S1T8G
EMBL:CU929079 EMBL:CABZ01084760 EMBL:CABZ01084761 EMBL:CABZ01115695
EMBL:CABZ01115696 EMBL:CU694252 EMBL:BC055548 IPI:IPI00497989
RefSeq:NP_571002.1 UniGene:Dr.4077 HSSP:P52175 SMR:Q7SXL4
STRING:Q7SXL4 Ensembl:ENSDART00000110456 Ensembl:ENSDART00000110761
GeneID:30084 KEGG:dre:30084 CTD:30084 OMA:HVQASED NextBio:20806569
Uniprot:Q7SXL4
Length = 153
Score = 219 (82.2 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 42/128 (32%), Positives = 75/128 (58%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ ++GEI R+E+ G +++AA + S++ ++ Y K++PF+ LV
Sbjct: 7 RTFIAVKPDGVQRGLMGEIIKRFEQKGFRLVAAKFVQASEDLAKQHYIDLKDQPFYAGLV 66
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+ SGP+ V EG + IK R+++G+TDP + GTIR DF + +N++H
Sbjct: 67 KYTSSGPLLAMVWEGLNVIKTGRVMLGETDPFASKPGTIRGDFCIEVGRNLIHGSDSEKS 126
Query: 542 RAKQLQKW 549
A ++ W
Sbjct: 127 AATEVSLW 134
>ZFIN|ZDB-GENE-000210-34 [details] [associations]
symbol:nme3 "non-metastatic cells 3, protein
expressed in" species:7955 "Danio rerio" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006165 "nucleoside diphosphate phosphorylation" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
ZFIN:ZDB-GENE-000210-34 GO:GO:0005524 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:CR387933 EMBL:BX936333
IPI:IPI00919954 PRIDE:E9QH64 Ensembl:ENSDART00000138400
ArrayExpress:E9QH64 Bgee:E9QH64 Uniprot:E9QH64
Length = 180
Score = 219 (82.2 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 39/128 (30%), Positives = 74/128 (57%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ +VGEI R+E+ G K++ + + S+ + + Y + +PF+ LV
Sbjct: 34 RTFLAVKPDGVQRRLVGEIIRRFERKGFKLVGMKLLQASEAQLRQHYWELREKPFYNGLV 93
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGP+ V +G D +K R ++G+T+P + GTIR D+ + +N++H +
Sbjct: 94 KYMSSGPIVAMVWQGLDVVKTARKMLGETNPADSLPGTIRGDYCVEVGRNVIHGSDSVES 153
Query: 542 RAKQLQKW 549
A+++ W
Sbjct: 154 AAREISLW 161
>ZFIN|ZDB-GENE-000210-32 [details] [associations]
symbol:nme2b.1 "non-metastatic cells 2b.1, protein
(NM23B) expressed in" species:7955 "Danio rerio" [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA;IMP]
[GO:0006183 "GTP biosynthetic process" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006165 "nucleoside
diphosphate phosphorylation" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] HAMAP:MF_00451 InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 ZFIN:ZDB-GENE-000210-32
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 HSSP:P22392 EMBL:AF202052 IPI:IPI00996615
UniGene:Dr.11052 ProteinModelPortal:Q9PTF5 SMR:Q9PTF5 STRING:Q9PTF5
PRIDE:Q9PTF5 ArrayExpress:Q9PTF5 Bgee:Q9PTF5 Uniprot:Q9PTF5
Length = 153
Score = 218 (81.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 42/128 (32%), Positives = 76/128 (59%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF + D +++ ++GEI R+E+ G +++A + S++ +++ Y K+RPF+ LV
Sbjct: 7 RTFIAVKPDGVQRGLMGEIIKRFEQKGFRLVAMKFLQASEDLLKQHYIDLKDRPFYPGLV 66
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +NI+H +
Sbjct: 67 KYMSSGPVLAIVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIEVGRNIIHGSDSVDS 126
Query: 542 RAKQLQKW 549
++ W
Sbjct: 127 ANTEISLW 134
>UNIPROTKB|Q4TT34 [details] [associations]
symbol:NME4 "Nucleoside diphosphate kinase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004550 "nucleoside diphosphate
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 EMBL:AL023881 GO:GO:0006183 GO:GO:0004550
HOGENOM:HOG000224564 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 HOVERGEN:HBG000423 EMBL:Z97634 UniGene:Hs.9235
HGNC:HGNC:7852 ChiTaRS:NME4 OMA:LVSWADG IPI:IPI00658182 SMR:Q4TT34
Ensembl:ENST00000382940 Uniprot:Q4TT34
Length = 195
Score = 216 (81.1 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 46/155 (29%), Positives = 84/155 (54%)
Query: 397 PPIIVIHGNRLKYIGNDYKRYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAA 454
P ++V HG+ L + KR RT + D +++ +VG++ R+E+ G ++
Sbjct: 22 PSLLVRHGSGLP--PSALKRGPSWTRERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGM 79
Query: 455 YMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIK 514
M + ++ + + Y + +PF+ L+ +M SGPV V EG + ++ R +IG TD +
Sbjct: 80 KMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAE 139
Query: 515 AAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
AA GTIR DF+ I +N++H + +++Q W
Sbjct: 140 AAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLW 174
>TIGR_CMR|GSU_3307 [details] [associations]
symbol:GSU_3307 "histidyl-tRNA synthetase, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00125
InterPro:IPR004516 InterPro:IPR004517 InterPro:IPR006195
PIRSF:PIRSF001549 PROSITE:PS50862 UniPathway:UPA00031
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006418 GO:GO:0004812
SUPFAM:SSF52954 GO:GO:0000105 Gene3D:3.40.50.800
HOGENOM:HOG000018077 KO:K02502 OMA:RGYHYHS ProtClustDB:PRK12292
PANTHER:PTHR11476 TIGRFAMs:TIGR00443 eggNOG:COG0124
RefSeq:NP_954347.1 ProteinModelPortal:P60837 GeneID:2688239
KEGG:gsu:GSU3307 PATRIC:22029457
BioCyc:GSUL243231:GH27-3322-MONOMER Uniprot:P60837
Length = 438
Score = 235 (87.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 81/325 (24%), Positives = 146/325 (44%)
Query: 872 DIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY 931
D +K + + F D +G +++ + T + R V Y P R+ YSG + RH Q
Sbjct: 62 DDLKAKTFRFDDRQSGKLIAVPSDITPQIARIVATRLRGYPLPHRICYSGRVLRHAELQS 121
Query: 932 GRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCID 991
GR R+ +Q GVE IG P+ DAE++ M K L ++ ++L +G F
Sbjct: 122 GRSREIFQSGVELIGLDSPEADAEMVTMAVEALKGLGFRDFKIDLGHVG-FIRGIMTASG 180
Query: 992 LINYIKKHKDSKWFCEDIK--HSLYLNSLRVLDSKNLII--------REILINAPKLL-D 1040
L ++ +D+ S+ S +K+ + RE+L A ++ +
Sbjct: 181 LEVAVRNRLQEAIGKKDVSAVRSILAESPLSDAAKDELAALPRLFGGREVLDEAGRVATN 240
Query: 1041 YLEKDSLDHFYGIQKILNYNNISYKINTKL--VRGMDYYNRTVFEWTTDKLGSQNSICGG 1098
+ +LD+ + +L+ + +S + L VRG+DY+ FE +G ++C G
Sbjct: 241 DTSRRALDNISQVLDLLDIHGVSDHLTIDLGEVRGLDYHTGLTFEGFVTGMGE--AVCSG 298
Query: 1099 GRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAF 1158
GRYD L ++ PA+GF + L+ ++K + S DI I + ++ +A
Sbjct: 299 GRYDTLTARYGFP-APATGFTFNVLALLSALEK-RPDVEASKTRDILIFNQ-QDDRREAL 355
Query: 1159 VLSENLRTLGLKVILNCVFNNIHES 1183
+++ LR G + + N +S
Sbjct: 356 EIAQQLRRRGYTTARDIIRRNFDDS 380
>UNIPROTKB|F2Z2X0 [details] [associations]
symbol:NME4 "Nucleoside diphosphate kinase" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 EMBL:AL023881
GO:GO:0006183 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 EMBL:Z97634 HGNC:HGNC:7852
ChiTaRS:NME4 IPI:IPI00855980 ProteinModelPortal:F2Z2X0 SMR:F2Z2X0
Ensembl:ENST00000444498 ArrayExpress:F2Z2X0 Bgee:F2Z2X0
Uniprot:F2Z2X0
Length = 233
Score = 212 (79.7 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 38/127 (29%), Positives = 72/127 (56%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG++ R+E+ G ++ M + ++ + + Y + +PF+ L+ +M SGPV
Sbjct: 47 DGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPV 106
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
V EG + ++ R +IG TD +AA GTIR DF+ I +N++H + +++Q W
Sbjct: 107 VAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLW 166
Query: 550 IHKFGVS 556
+S
Sbjct: 167 FQSSELS 173
>UNIPROTKB|O00746 [details] [associations]
symbol:NME4 "Nucleoside diphosphate kinase, mitochondrial"
species:9606 "Homo sapiens" [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=TAS] [GO:0009116
"nucleoside metabolic process" evidence=TAS] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=EXP] [GO:0005743
"mitochondrial inner membrane" evidence=TAS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055086 "nucleobase-containing small molecule
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_111217 InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 GO:GO:0046872 GO:GO:0009116 EMBL:CH471112
GO:GO:0015949 EMBL:AE006463 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 HOGENOM:HOG000224564 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 EMBL:Y07604 EMBL:BT019438 EMBL:Z97634
EMBL:BC004880 EMBL:BC017067 IPI:IPI00012972 RefSeq:NP_005000.1
UniGene:Hs.9235 PDB:1EHW PDBsum:1EHW ProteinModelPortal:O00746
SMR:O00746 IntAct:O00746 MINT:MINT-1445974 STRING:O00746
PhosphoSite:O00746 PRIDE:O00746 DNASU:4833 Ensembl:ENST00000219479
GeneID:4833 KEGG:hsa:4833 UCSC:uc002cgz.3 CTD:4833
GeneCards:GC16P000446 H-InvDB:HIX0012647 HGNC:HGNC:7852 MIM:601818
neXtProt:NX_O00746 PharmGKB:PA31657 ChEMBL:CHEMBL4488 ChiTaRS:NME4
EvolutionaryTrace:O00746 GenomeRNAi:4833 NextBio:18626
ArrayExpress:O00746 Bgee:O00746 CleanEx:HS_NME4
Genevestigator:O00746 GermOnline:ENSG00000103200 Uniprot:O00746
Length = 187
Score = 211 (79.3 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 37/120 (30%), Positives = 70/120 (58%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG++ R+E+ G ++ M + ++ + + Y + +PF+ L+ +M SGPV
Sbjct: 47 DGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPV 106
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
V EG + ++ R +IG TD +AA GTIR DF+ I +N++H + +++Q W
Sbjct: 107 VAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLW 166
>UNIPROTKB|F1RGV5 [details] [associations]
symbol:NME4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA]
HAMAP:MF_00451 InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005739 GO:GO:0005524 GO:GO:0006183
GO:GO:0004550 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 GeneTree:ENSGT00700000104244 OMA:LVSWADG
EMBL:FP103065 Ensembl:ENSSSCT00000008751 Uniprot:F1RGV5
Length = 187
Score = 210 (79.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 38/129 (29%), Positives = 75/129 (58%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG++ R+E+ G K++ M ++ ++ + + Y + +PF+ L+++M SGPV
Sbjct: 47 DGVQRRLVGDVIQRFERRGFKLVGMKMLQVPESLLAEHYHELRRKPFYPALISYMSSGPV 106
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
V EG + + R +IG T+ +AA GTIR DF+ I +N++H + +++Q W
Sbjct: 107 VAMVWEGPNVVCASRAMIGHTNSAEAAPGTIRGDFSIHISRNVIHASDSVEGAQREIQLW 166
Query: 550 IHKFGVSDF 558
+ D+
Sbjct: 167 FQSSELVDW 175
>TAIR|locus:2161922 [details] [associations]
symbol:NDPK2 "nucleoside diphosphate kinase 2"
species:3702 "Arabidopsis thaliana" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA;ISS;IDA;TAS] [GO:0005524
"ATP binding" evidence=IEA;ISS] [GO:0006165 "nucleoside diphosphate
phosphorylation" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] [GO:0006228 "UTP biosynthetic process"
evidence=IEA] [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009585 "red, far-red light
phototransduction" evidence=IMP] [GO:0042542 "response to hydrogen
peroxide" evidence=IEP;IMP] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009411 "response to UV" evidence=TAS]
[GO:0009734 "auxin mediated signaling pathway" evidence=IMP]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0009411 GO:GO:0009734 GO:GO:0046872
EMBL:AB023035 GO:GO:0009941 GO:GO:0042542 GO:GO:0009579
GO:GO:0009585 EMBL:AB008265 UniGene:At.24504 GO:GO:0006183
GO:GO:0004550 EMBL:AF017640 EMBL:AJ012758 EMBL:AY057612
EMBL:AY065291 EMBL:AY117366 EMBL:AF058391 IPI:IPI00517103
PIR:T51612 PIR:T52586 RefSeq:NP_568970.2 PDB:1S57 PDB:1S59
PDBsum:1S57 PDBsum:1S59 ProteinModelPortal:O64903 SMR:O64903
IntAct:O64903 STRING:O64903 PaxDb:O64903 PRIDE:O64903
EnsemblPlants:AT5G63310.1 GeneID:836451 KEGG:ath:AT5G63310
TAIR:At5g63310 eggNOG:COG0105 HOGENOM:HOG000224564
InParanoid:O64903 KO:K00940 OMA:SAKSFFP PhylomeDB:O64903
ProtClustDB:CLSN2722776 BioCyc:ARA:AT5G63310-MONOMER
EvolutionaryTrace:O64903 Genevestigator:O64903 GermOnline:AT5G63310
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 Uniprot:O64903
Length = 231
Score = 210 (79.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/121 (38%), Positives = 66/121 (54%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VGEI +R+EK G K+I M + K E+ Y + FF NL+ ++ SGPV
Sbjct: 93 DGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPV 152
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAK-QLQK 548
EG + R LIG TDP++A GTIR D A +NIVH + P K ++
Sbjct: 153 VCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHG-SDSPENGKREIGL 211
Query: 549 W 549
W
Sbjct: 212 W 212
>MGI|MGI:1931148 [details] [associations]
symbol:Nme4 "NME/NM23 nucleoside diphosphate kinase 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006165 "nucleoside
diphosphate phosphorylation" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0009117 "nucleotide metabolic process"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 MGI:MGI:1931148 GO:GO:0005739 GO:GO:0005524
GO:GO:0005758 GO:GO:0046872 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 HOVERGEN:HBG000423
OrthoDB:EOG45757V GeneTree:ENSGT00700000104244 CTD:4833
EMBL:AF153451 EMBL:AF288690 EMBL:AF288692 EMBL:BC027277
IPI:IPI00125448 RefSeq:NP_062705.1 UniGene:Mm.41787
ProteinModelPortal:Q9WV84 SMR:Q9WV84 STRING:Q9WV84
PhosphoSite:Q9WV84 PaxDb:Q9WV84 PRIDE:Q9WV84
Ensembl:ENSMUST00000025007 GeneID:56520 KEGG:mmu:56520
UCSC:uc008bdh.1 InParanoid:Q9WV84 OMA:LVSWADG NextBio:312846
Bgee:Q9WV84 CleanEx:MM_NME4 Genevestigator:Q9WV84
GermOnline:ENSMUSG00000024177 Uniprot:Q9WV84
Length = 186
Score = 206 (77.6 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 37/120 (30%), Positives = 70/120 (58%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG + R+E+ G K++ M + ++ + + Y + +PF+ L+++M SGPV
Sbjct: 46 DGVQRRLVGTVIQRFERRGFKLVGMKMLQAPESILAEHYRDLQRKPFYPALISYMSSGPV 105
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
V EG + + R +IG TD +AA GTIR DF+ I +N++H + ++++ W
Sbjct: 106 VAMVWEGPNVVHISRAMIGHTDSTEAAPGTIRGDFSVHISRNVIHASDSVDGAQREIELW 165
>DICTYBASE|DDB_G0279911 [details] [associations]
symbol:ndkM "NDP kinase" species:44689 "Dictyostelium
discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0009142 "nucleoside
triphosphate biosynthetic process" evidence=ISS] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA;ISS]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0006165 "nucleoside
diphosphate phosphorylation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0009117 "nucleotide metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 dictyBase:DDB_G0279911
GO:GO:0005739 GO:GO:0005524 GO:GO:0045335 GO:GO:0009617
GO:GO:0005758 GenomeReviews:CM000152_GR GO:GO:0046872
EMBL:AAFI02000035 GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105
KO:K00940 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
InterPro:IPR023005 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 GO:GO:0009142 EMBL:L23068 PIR:B49547
RefSeq:XP_641417.1 ProteinModelPortal:P34093 SMR:P34093
STRING:P34093 PRIDE:P34093 EnsemblProtists:DDB0214817
GeneID:8622301 KEGG:ddi:DDB_G0279911 OMA:NESAAHE Uniprot:P34093
Length = 220
Score = 205 (77.2 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 429 IDALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGP 488
+ + ++ ++GEI R+EK G K++ + + K Y +PFF LV F SG
Sbjct: 81 VSSTQRRLIGEIIARFEKKGFKLVGIKILVPTPEHAAKHYEDLNKKPFFNGLVKFFSSGA 140
Query: 489 VFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQK 548
V V EG+D ++ R+LIG TDP ++A GTIR D +NI+H A ++
Sbjct: 141 VVAMVFEGKDVVRTGRVLIGATDPSQSAPGTIRFDLCIETGRNIIHGSDSNESAAHEIAL 200
Query: 549 WIHKFGVSDF 558
W + ++++
Sbjct: 201 WFKEDEIANW 210
>UNIPROTKB|J9P932 [details] [associations]
symbol:J9P932 "Nucleoside diphosphate kinase" species:9615
"Canis lupus familiaris" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] HAMAP:MF_00451
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:AAEX03013104
Ensembl:ENSCAFT00000016474 OMA:YELANAQ Uniprot:J9P932
Length = 187
Score = 205 (77.2 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 38/129 (29%), Positives = 71/129 (55%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG++ R+E+ G K++ M + + + + + + +PF+ L+++M SGPV
Sbjct: 47 DGVQRRLVGDVIQRFERRGFKLVGMKMLQAPERVLAEHHHDLQRKPFYPPLISYMTSGPV 106
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
V EG + R +IG TD +A GTIR DF+ I +NI+H + +++Q W
Sbjct: 107 VAMVWEGPSVVCSSRTMIGHTDSAEATPGTIRGDFSIHISRNIIHASDSVEGARREIQLW 166
Query: 550 IHKFGVSDF 558
+ D+
Sbjct: 167 FQSSELVDW 175
>UNIPROTKB|O60361 [details] [associations]
symbol:NME2P1 "Putative nucleoside diphosphate kinase"
species:9606 "Homo sapiens" [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 GO:GO:0046872 GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 HOGENOM:HOG000224564 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 EMBL:AC004263 IPI:IPI00029091 UniGene:Hs.577804
ProteinModelPortal:O60361 SMR:O60361 IntAct:O60361 STRING:O60361
PaxDb:O60361 PRIDE:O60361 GeneCards:GC12P120719 HGNC:HGNC:31358
HPA:HPA041113 neXtProt:NX_O60361 InParanoid:O60361
OrthoDB:EOG4S1T8G PhylomeDB:O60361 Genevestigator:O60361
GermOnline:ENSG00000123009 Uniprot:O60361
Length = 137
Score = 204 (76.9 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 38/103 (36%), Positives = 64/103 (62%)
Query: 432 LEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPVFI 491
++ +VG+I R+E+ G +++A S+ +++ Y K+RPFF LV +M SGPV
Sbjct: 1 MQCGLVGKIIKRFEQKGFRLVAMKFLPASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVA 60
Query: 492 QVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
V EG + +K R+++G+T+P + GTIR DF + +NI+H
Sbjct: 61 MVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIH 103
>UNIPROTKB|J3KPD9 [details] [associations]
symbol:NME2 "Nucleoside diphosphate kinase B" species:9606
"Homo sapiens" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0006183
EMBL:AC005839 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919 HGNC:HGNC:7850
ChiTaRS:NME2 ProteinModelPortal:J3KPD9 Ensembl:ENST00000376392
Uniprot:J3KPD9
Length = 197
Score = 202 (76.2 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 40/113 (35%), Positives = 69/113 (61%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++ + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVH 534
+M SGPV V EG + +K R+++G+T+P + GTIR DF + + + +
Sbjct: 66 KYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTMAN 118
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A + S+ +++ Y K+RPFF LV
Sbjct: 121 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLV 180
Query: 482 NFMISGPV 489
+M SGPV
Sbjct: 181 KYMNSGPV 188
>UNIPROTKB|F1MPL4 [details] [associations]
symbol:NME2 "Nucleoside diphosphate kinase B" species:9913
"Bos taurus" [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 GO:GO:0005737 GO:GO:0043066
GO:GO:0030027 GO:GO:0001726 GO:GO:0050679 GO:GO:0045618
GO:GO:0006183 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
GeneTree:ENSGT00700000104244 IPI:IPI00903886 OMA:RIIGATR
EMBL:DAAA02049024 Ensembl:ENSBTAT00000043502 Uniprot:F1MPL4
Length = 114
Score = 202 (76.2 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 41/109 (37%), Positives = 67/109 (61%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++A + S+ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQASEELLKQHYIDLKDRPFFPGLV 65
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDK 530
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +
Sbjct: 66 KYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGR 114
>UNIPROTKB|E7ERL0 [details] [associations]
symbol:NME1 "Nucleoside diphosphate kinase A" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0002762
"negative regulation of myeloid leukocyte differentiation"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0010976 "positive regulation of
neuron projection development" evidence=IEA] [GO:0014075 "response
to amine stimulus" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0019215 "intermediate filament binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0033574
"response to testosterone stimulus" evidence=IEA] [GO:0035690
"cellular response to drug" evidence=IEA] [GO:0043015
"gamma-tubulin binding" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0051591 "response to cAMP"
evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0071398 "cellular response to fatty acid"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0005737 GO:GO:0006183 EMBL:AC005839
GO:GO:0004550 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
PANTHER:PTHR11349 SUPFAM:SSF54919 HGNC:HGNC:7849 IPI:IPI01014620
ProteinModelPortal:E7ERL0 SMR:E7ERL0 Ensembl:ENST00000480143
UCSC:uc010dbx.2 ArrayExpress:E7ERL0 Bgee:E7ERL0 Uniprot:E7ERL0
Length = 139
Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 40/109 (36%), Positives = 67/109 (61%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++ + S++ +++ Y K+RPFF LV
Sbjct: 31 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLV 90
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDK 530
+M SGPV V EG + +K R+++G+T+P + GTIR DF + +
Sbjct: 91 KYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGR 139
>TIGR_CMR|BA_1424 [details] [associations]
symbol:BA_1424 "histidyl-tRNA synthetase, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00125
InterPro:IPR004516 InterPro:IPR004517 InterPro:IPR006195
PIRSF:PIRSF001549 PROSITE:PS50862 UniPathway:UPA00031 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006418 GO:GO:0004812 GO:GO:0000105
RefSeq:NP_843881.1 RefSeq:YP_018045.1 RefSeq:YP_027584.1
ProteinModelPortal:Q81T64 DNASU:1085929
EnsemblBacteria:EBBACT00000012552 EnsemblBacteria:EBBACT00000015149
EnsemblBacteria:EBBACT00000022213 GeneID:1085929 GeneID:2814620
GeneID:2850865 KEGG:ban:BA_1424 KEGG:bar:GBAA_1424 KEGG:bat:BAS1315
eggNOG:COG3705 HOGENOM:HOG000018077 KO:K02502 OMA:RGYHYHS
ProtClustDB:PRK12292 BioCyc:BANT260799:GJAJ-1389-MONOMER
BioCyc:BANT261594:GJ7F-1451-MONOMER PANTHER:PTHR11476
TIGRFAMs:TIGR00443 Uniprot:Q81T64
Length = 420
Score = 219 (82.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 90/338 (26%), Positives = 160/338 (47%)
Query: 873 IVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYG 932
I +++MY F DE G + LRP+ T + R V D P ++ YSG +FR G
Sbjct: 60 IDEEKMYKFFDE-KGRIIVLRPDMTIPLARVVGTQRC--DTPLKVTYSGNVFRANESLAG 116
Query: 933 RYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFN-ERKKYCID 991
+Y + Q G+E IG + E +I + + L +++ +E+ + + KK I
Sbjct: 117 KYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLRVQSFTIEIGQVQLYKCIVKKLSIH 176
Query: 992 ------LINYI--KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIR--EILINAPKLLDY 1041
L YI K + F D K ++++L+ + E++ A KL
Sbjct: 177 EEEEKFLRTYIESKNYASLSNFIRDKKLDRCDETVKLLEKLPRLFGNLEVIEEAEKLASS 236
Query: 1042 LE-KDSLDH----FYGIQKILNYNN-ISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSI 1095
E K ++ + I+K L Y + IS + T ++ +DYY +F+ ++G + I
Sbjct: 237 NEMKMAITRVKEIYEAIEK-LGYGSYISIDLGT--IQHLDYYTGVIFKGYIYEIGEE--I 291
Query: 1096 CGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAEL 1155
GGRYD LI F + +PA G A+ + ++++ +++ + + DI ++H EL
Sbjct: 292 VSGGRYDELIGNFG-EMLPAVGLAVQVNQIVKALQEQQEPYE-RKRIDI-MIHY----EL 344
Query: 1156 KAFVLSENLRTL----GLKVILNCVFNNIHESFKSQMK 1189
+E LR L G KV L+ +F+N++++F+ K
Sbjct: 345 NRLAEAERLRNLLQKDGKKVALS-LFSNLNDTFQFARK 381
>TIGR_CMR|CHY_1083 [details] [associations]
symbol:CHY_1083 "putative ATP phosphoribosyltransferase,
regulatory subunit" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0000105 "histidine biosynthetic
process" evidence=ISS] [GO:0003879 "ATP phosphoribosyltransferase
activity" evidence=ISS] [GO:0030234 "enzyme regulator activity"
evidence=ISS] HAMAP:MF_00125 InterPro:IPR004516 InterPro:IPR004517
InterPro:IPR006195 PIRSF:PIRSF001549 PROSITE:PS50862
UniPathway:UPA00031 GO:GO:0005524 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006418 GO:GO:0004812 GO:GO:0000105
eggNOG:COG3705 HOGENOM:HOG000018077 PANTHER:PTHR11476
TIGRFAMs:TIGR00443 RefSeq:YP_359929.1 ProteinModelPortal:Q3AD55
STRING:Q3AD55 GeneID:3727195 KEGG:chy:CHY_1083 PATRIC:21275301
OMA:GYREHVK BioCyc:CHYD246194:GJCN-1082-MONOMER Uniprot:Q3AD55
Length = 324
Score = 213 (80.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 79/273 (28%), Positives = 135/273 (49%)
Query: 870 ETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERP 929
ETD++K F+D G+ L+LR + T + R V + P +++Y+ +F
Sbjct: 58 ETDLIK-----FVDR-TGELLALRGDMTTPIARVVSTKMKHRELPLKIFYAATVFSGNFS 111
Query: 930 QYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNER-KKY 988
+ R+F Q+G+E G ++++LI + + + +KN+ + L + ++Y
Sbjct: 112 GRNKLREFKQLGIEVFGDITSKLESDLIKLMAVYLRKAKVKNLEISLGHVDILTGLIEEY 171
Query: 989 CIDLINY---IKKHKDSKWFC--EDIKHSLYLNSLRVLDSKNLIIRE-----ILINAPKL 1038
+L N+ IK + K + E I S RV +S +++ IL A K+
Sbjct: 172 --ELFNHFSEIKNALNQKDYVALEGIFERAG-KSQRVRESLVDFLQQRGGKAILRKAKKM 228
Query: 1039 LDYLE-KDSLDHFYGIQKILNYNNI-SYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSIC 1096
L + + K +L+ + + L + K++ LVR ++YY VFE T LG +
Sbjct: 229 LSHPKAKKALEELEEVTEYLISEGVRELKLDFSLVRDLNYYTGLVFEAYTPYLGYP--LG 286
Query: 1097 GGGRYDFLIKKFSNKFVPASGFAIGIERLIELI 1129
GGGRYD L+KKF PA GFA+G+ER++E I
Sbjct: 287 GGGRYDTLLKKFGWD-TPAFGFALGLERIVESI 318
>TIGR_CMR|CJE_1036 [details] [associations]
symbol:CJE_1036 "tRNA modification GTPase TrmE"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:YP_179032.1 ProteinModelPortal:Q5HUK3
STRING:Q5HUK3 GeneID:3231546 KEGG:cjr:CJE1036 PATRIC:20043873
BioCyc:CJEJ195099:GJC0-1063-MONOMER Uniprot:Q5HUK3
Length = 442
Score = 218 (81.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 49/125 (39%), Positives = 75/125 (60%)
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IE K+AIVGKPNVGKS+L+N+LL R I D GTTRD+I+ F+ +IDTAG
Sbjct: 212 IEGFKIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAG 271
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR +VIE+ V + KS+ +A++++ + DA + +D I + + + + +
Sbjct: 272 IRESK---DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWI 328
Query: 300 VNKWD 304
+NK D
Sbjct: 329 LNKSD 333
Score = 39 (18.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 459 LSKNDVEKFYSIHKNRPFFKNLVNFMISGPVFIQVLEGE-DAIKKHRILIGDTDPIKAAK 517
L+K+D+E + +N+ F K I+ + + L+ ++ I++ D I A K
Sbjct: 329 LNKSDLENVFKNTQNKNFIKLSAQKDIT--LLKEELQNYLNSFDSEGIMVSSLDLINACK 386
Query: 518 GTIRADF 524
+ A F
Sbjct: 387 ISSEAIF 393
>TIGR_CMR|GSU_3465 [details] [associations]
symbol:GSU_3465 "tRNA modification GTPase TrmE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:NP_954505.1 ProteinModelPortal:Q746Q3
GeneID:2686588 KEGG:gsu:GSU3465 PATRIC:22029787
BioCyc:GSUL243231:GH27-3432-MONOMER Uniprot:Q746Q3
Length = 456
Score = 217 (81.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 52/124 (41%), Positives = 75/124 (60%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E + V I GKPNVGKS+L+N+LL E R I PGTTRD I+ + +IDTAGI
Sbjct: 219 EGVAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGI 278
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R T +++EK V TL+ I EA++V+L++D + + D I + + +G+ LI+
Sbjct: 279 R---DTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSAL--AGKRLILVE 333
Query: 301 NKWD 304
NK D
Sbjct: 334 NKCD 337
Score = 40 (19.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 845 SGIFVTIRKIRGNDINAACGQLSGEET 871
SG + + + D AA G+++GE T
Sbjct: 414 SGFTLELLAVELRDALAAVGEVTGETT 440
>UNIPROTKB|J9NWI3 [details] [associations]
symbol:LOC483943 "Nucleoside diphosphate kinase"
species:9615 "Canis lupus familiaris" [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:AAEX03000073
Ensembl:ENSCAFT00000000065 Uniprot:J9NWI3
Length = 152
Score = 189 (71.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 39/127 (30%), Positives = 72/127 (56%)
Query: 425 TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVN 482
TF I D +++N+VGE +E+ G +IA + + S++ +++ Y K+ PFF +LV
Sbjct: 7 TFVAIKPDGVQRNLVGETIKHFEQKGFCLIAMKLIQASEDFLKEHYIDLKDHPFFASLVK 66
Query: 483 FMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFR 542
+M SGPV V +G + +K ++++ +T+ + GTI DF + +NI+H +
Sbjct: 67 YMQSGPVVAMVRKGLNVVKTGQVMLRETNSADSKPGTIHGDFCIQVGRNIIHGSDSVESA 126
Query: 543 AKQLQKW 549
K++ W
Sbjct: 127 EKEIDLW 133
>TIGR_CMR|CHY_0006 [details] [associations]
symbol:CHY_0006 "tRNA modification GTPase TrmE"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
OMA:PGEFSEQ HOGENOM:HOG000200713 RefSeq:YP_358878.1
ProteinModelPortal:Q3AG56 STRING:Q3AG56 GeneID:3727714
KEGG:chy:CHY_0006 PATRIC:21273213 BioCyc:CHYD246194:GJCN-6-MONOMER
Uniprot:Q3AG56
Length = 461
Score = 209 (78.6 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 54/152 (35%), Positives = 79/152 (51%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E I I GKPNVGKS+L+N+LL + R I D PGTTRD I+ ++DTAGI
Sbjct: 221 EGITAVIAGKPNVGKSSLLNALLRKKRAIVTDIPGTTRDVIEDYLNLKGIPVKIVDTAGI 280
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R +T +++EK V KT + + +A+V + ++D I D I + I + +SL+V +
Sbjct: 281 R---ETEDLVEKLGVEKTREYLNQADVTLFVVDVSIGIDEDDEKILSLINKD-KSLLV-I 335
Query: 301 NKWDSXXXXXXXXXXXXXXXXXXFLSFAMFNF 332
NK D F+ F+ NF
Sbjct: 336 NKIDLLQGKVNFEQYAVKTGIKNFVPFSARNF 367
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 6 VLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFI--IIDTGGFEPE 63
V+ G+PNVGKS+L N L + A+V + PG TRD E Y+ K I+DT G E
Sbjct: 226 VIAGKPNVGKSSLLNALLRKKRAIVTDIPGTTRD--VIEDYLNLKGIPVKIVDTAGIR-E 282
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
+ + ++T++ VD G+ E D+ I + + K +V+
Sbjct: 283 TEDLVEKLGVEKTREYLNQADVTLFVVDVSIGIDEDDEKILSLINKDKSLLVI 335
>UNIPROTKB|Q74AX3 [details] [associations]
symbol:era "GTPase Era" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 47/120 (39%), Positives = 69/120 (57%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+I+G+PNVGKSTL+N +LGE VIT D P TTR+ I+ + + + IDT GI
Sbjct: 12 VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIHHAR 71
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ KF V + L SI E ++V+LL++A + Q+ IA + + + VNK D
Sbjct: 72 SR---LNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPVFLVVNKID 128
>TIGR_CMR|GSU_2226 [details] [associations]
symbol:GSU_2226 "GTP-binding protein Era" species:243231
"Geobacter sulfurreducens PCA" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 47/120 (39%), Positives = 69/120 (57%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+I+G+PNVGKSTL+N +LGE VIT D P TTR+ I+ + + + IDT GI
Sbjct: 12 VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIHHAR 71
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ KF V + L SI E ++V+LL++A + Q+ IA + + + VNK D
Sbjct: 72 SR---LNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPVFLVVNKID 128
>UNIPROTKB|F1N911 [details] [associations]
symbol:F1N911 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0006183
GO:GO:0004550 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
SUPFAM:SSF54919 GeneTree:ENSGT00700000104244 EMBL:AADN02049386
EMBL:AADN02049387 IPI:IPI00603930 Ensembl:ENSGALT00000011824
Uniprot:F1N911
Length = 117
Score = 185 (70.2 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 32/101 (31%), Positives = 62/101 (61%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
DA+++ +VG++ R+E+ G K++A + + + +++ Y + +PF+ L+ +M SGP+
Sbjct: 17 DAVQRRLVGDVIGRFERRGFKLVAMKLLQADRGLLDRHYQHLQQKPFYPALLAYMTSGPL 76
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDK 530
V EG + ++ R ++GDTD AA GTIR D + + +
Sbjct: 77 VAMVWEGYNVVRSTRAMVGDTDSAHAAAGTIRGDLSMHVSR 117
>UNIPROTKB|F1NG65 [details] [associations]
symbol:F1NG65 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005739 GO:GO:0005524 GO:GO:0006183
GO:GO:0004550 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
SUPFAM:SSF54919 GeneTree:ENSGT00700000104244 EMBL:AADN02049386
EMBL:AADN02049387 IPI:IPI01017226 Ensembl:ENSGALT00000004234
OMA:PRCYGSA Uniprot:F1NG65
Length = 179
Score = 185 (70.2 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 32/101 (31%), Positives = 62/101 (61%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
DA+++ +VG++ R+E+ G K++A + + + +++ Y + +PF+ L+ +M SGP+
Sbjct: 40 DAVQRRLVGDVIGRFERRGFKLVAMKLLQADRGLLDRHYQHLQQKPFYPALLAYMTSGPL 99
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDK 530
V EG + ++ R ++GDTD AA GTIR D + + +
Sbjct: 100 VAMVWEGYNVVRSTRAMVGDTDSAHAAAGTIRGDLSMHVSR 140
>RGD|1594734 [details] [associations]
symbol:Nme2-ps1 "non-metastatic cells 2, protein (NM23B)
expressed in, pseudogene 1" species:10116 "Rattus norvegicus"
[GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 RGD:1594734 GO:GO:0005524 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 OrthoDB:EOG4S1T8G IPI:IPI00191897
PRIDE:D3ZGV9 Ensembl:ENSRNOT00000037297 Uniprot:D3ZGV9
Length = 143
Score = 185 (70.2 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 42/137 (30%), Positives = 74/137 (54%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+++ G +++A + S++ +++ Y K+RPF+
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFKQKGFRLVAMKFLQASEDHLKQHYIDLKDRPFY---- 61
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPF 541
M SGPV V EG D +K R+++G+T P + GT+ DF + NI+H +
Sbjct: 62 --MSSGPV---VWEGLDVVKTGRVMVGETSPADSKPGTVHGDFCIQVGMNIIHGSDSVES 116
Query: 542 RAKQLQKWIHKFGVSDF 558
K++ W + D+
Sbjct: 117 AEKEMGLWFKPEELIDY 133
>TIGR_CMR|SPO_0667 [details] [associations]
symbol:SPO_0667 "histidyl-tRNA synthetase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 HOGENOM:HOG000018071 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 ProtClustDB:PRK00037 OMA:RGERAQK
RefSeq:YP_165922.1 ProteinModelPortal:Q5LVN3 GeneID:3192980
KEGG:sil:SPO0667 PATRIC:23374601 Uniprot:Q5LVN3
Length = 495
Score = 131 (51.2 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 40/133 (30%), Positives = 71/133 (53%)
Query: 1066 INTKLVRGMDYYNRTVFEWTT-----DKLGSQN---SICGGGRYDFLIKKFSNKFVPASG 1117
I+ +VRG+ YY V+E D+ G + S+ GGGRYD L+K+F+ + VPA+G
Sbjct: 298 IDPSVVRGLGYYTGPVYEAELTFEIFDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATG 357
Query: 1118 FAIGIERLIELIK-KININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCV 1176
+IG++RL+ ++ K I + ++ + A+ +A V LR G++ V
Sbjct: 358 VSIGVDRLLAALREKGRIRTAERGPVVVTVMDRDRMADYQAMVAE--LRNAGIRAE---V 412
Query: 1177 FNNIHESFKSQMK 1189
+ ++F +Q+K
Sbjct: 413 YLGNPKNFGNQLK 425
Score = 126 (49.4 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 883 DELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGV 942
D+ GD ++LR + TA + R ++ P R + GP++R+E+P GRYRQFYQ
Sbjct: 81 DDGAGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRNEKPGPGRYRQFYQCDA 140
Query: 943 EAIGFPGPDIDAELIIMCS 961
+ +G DAE+ M S
Sbjct: 141 DTVGSASMAADAEICAMLS 159
>TIGR_CMR|BA_5734 [details] [associations]
symbol:BA_5734 "tRNA modification GTPase TrmE"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291
RefSeq:NP_847879.1 RefSeq:YP_031574.1 RefSeq:YP_052661.1
ProteinModelPortal:Q81JD9 DNASU:1085503
EnsemblBacteria:EBBACT00000010687 EnsemblBacteria:EBBACT00000014942
EnsemblBacteria:EBBACT00000021840 GeneID:1085503 GeneID:2820766
GeneID:2848296 KEGG:ban:BA_5734 KEGG:bar:GBAA_5734 KEGG:bat:BAS5337
HOGENOM:HOG000200713 OMA:IDFPEEV
BioCyc:BANT260799:GJAJ-5414-MONOMER
BioCyc:BANT261594:GJ7F-5590-MONOMER Uniprot:Q81JD9
Length = 458
Score = 202 (76.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 46/124 (37%), Positives = 76/124 (61%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E I AI+G+PNVGKS+L+NSL+ E + I D GTTRD I+ LIDTAGI
Sbjct: 219 EGIATAIIGRPNVGKSSLLNSLVQEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGI 278
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R +T +V+E+ V ++ + + +A++V+++++ + ++ +D + + G+ IV V
Sbjct: 279 R---ETEDVVERIGVERSKEMMSQADLVLVVVNYSETLTNEDEELFRAV--QGKDFIVIV 333
Query: 301 NKWD 304
NK D
Sbjct: 334 NKTD 337
>UNIPROTKB|G1K1A3 [details] [associations]
symbol:NME1 "Nucleoside diphosphate kinase" species:9913
"Bos taurus" [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0043388 "positive regulation of
DNA binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0004536 "deoxyribonuclease
activity" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005525 GO:GO:0005739
GO:GO:0005524 GO:GO:0000287 GO:GO:0007595 GO:GO:0004536
GO:GO:0050679 GO:GO:0043388 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
GeneTree:ENSGT00700000104244 EMBL:DAAA02049025
Ensembl:ENSBTAT00000006106 OMA:PFFASLE Uniprot:G1K1A3
Length = 110
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 460 SKNDVEKFYSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGT 519
S++ +++ Y K+RPFF LV +M SGPV V EG + +K R+++G+T+P + GT
Sbjct: 2 SEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGT 61
Query: 520 IRADFAESIDKNIVHELGEMPFRAKQLQKWIH 551
IR DF + +NI+H + K++ W H
Sbjct: 62 IRGDFCIQVGRNIIHGSDSVESAEKEIALWFH 93
>UNIPROTKB|H0Y6J0 [details] [associations]
symbol:NME4 "Nucleoside diphosphate kinase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004550 "nucleoside diphosphate
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] InterPro:IPR001564
Pfam:PF00334 PRINTS:PR01243 SMART:SM00562 GO:GO:0005524
EMBL:AL023881 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
EMBL:Z97634 HGNC:HGNC:7852 ChiTaRS:NME4 ProteinModelPortal:H0Y6J0
Ensembl:ENST00000433358 Uniprot:H0Y6J0
Length = 169
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 37/121 (30%), Positives = 68/121 (56%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG++ R+E+ G ++ M + ++ + + Y + +PF+ L+ +M SGPV
Sbjct: 43 DGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPV 102
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
V EG + ++ R +IG TD +AA GTIR DF+ I H L + R ++ Q+
Sbjct: 103 VAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISS---HRLAPLD-RGQREQQM 158
Query: 550 I 550
+
Sbjct: 159 V 159
>SGD|S000004625 [details] [associations]
symbol:MSS1 "Mitochondrial protein" species:4932
"Saccharomyces cerevisiae" [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0070899
"mitochondrial tRNA wobble uridine modification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
SGD:S000004625 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005743 GO:GO:0003924 EMBL:BK006946 EMBL:Z49211
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH GeneTree:ENSGT00390000016851 OrthoDB:EOG4B2X62
EMBL:X69481 EMBL:DQ834923 PIR:S54025 RefSeq:NP_013736.1
ProteinModelPortal:P32559 SMR:P32559 DIP:DIP-5882N IntAct:P32559
MINT:MINT-2788166 STRING:P32559 PaxDb:P32559 EnsemblFungi:YMR023C
GeneID:855037 KEGG:sce:YMR023C CYGD:YMR023c NextBio:978251
Genevestigator:P32559 GermOnline:YMR023C GO:GO:0070899
Uniprot:P32559
Length = 526
Score = 201 (75.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 52/156 (33%), Positives = 88/156 (56%)
Query: 153 NFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
N +NI+ + F +K E + I IK+ ++G PNVGKS+L+NSL ++ I D
Sbjct: 246 NVEKNIICLRDQIVTFMQKVEKSTILQ-NGIKLVLLGAPNVGKSSLVNSLTNDDISIVSD 304
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI ++ N K I+ DTAGIR K+ + IE + + K +++++ + ++
Sbjct: 305 IPGTTRDSIDAMINVNGYKVIICDTAGIRE--KSSDKIEMLGIDRAKKKSVQSDLCLFIV 362
Query: 273 DAQQ--NISAQDINIANFIYES--GRSLIVCVNKWD 304
D + +DI +A+ ++ + +I+ VNK D
Sbjct: 363 DPTDLSKLLPEDI-LAHLSSKTFGNKRIIIVVNKSD 397
>TIGR_CMR|DET_0846 [details] [associations]
symbol:DET_0846 "histidyl-tRNA synthetase, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00125
InterPro:IPR004516 InterPro:IPR004517 InterPro:IPR006195
PIRSF:PIRSF001549 PROSITE:PS50862 UniPathway:UPA00031 GO:GO:0005524
GO:GO:0005737 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0006418
GO:GO:0004812 GO:GO:0000105 PANTHER:PTHR11476 RefSeq:YP_181573.1
ProteinModelPortal:Q3Z876 STRING:Q3Z876 GeneID:3229858
KEGG:det:DET0846 PATRIC:21608751 eggNOG:COG0124
HOGENOM:HOG000010120 KO:K01892 OMA:RYIESIF ProtClustDB:CLSK837255
BioCyc:DETH243164:GJNF-847-MONOMER Uniprot:Q3Z876
Length = 412
Score = 198 (74.8 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 83/324 (25%), Positives = 148/324 (45%)
Query: 867 SGEETDIVKKEMYSFID--ELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMF 924
SG T + K +YSF+D +G+ + LRP+GT R I+N L RL Y+ +F
Sbjct: 52 SGTLTPQMLKRVYSFLDWDGWSGERVVLRPDGTIPAARLYIDN-LQEMEVARLCYTSNIF 110
Query: 925 RHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNE 984
R + + R+ +Q+G E IG G + +AELI + L +++ L L+ ++
Sbjct: 111 RFDETGK-KSRENWQLGAEIIGVTGSEANAELITLALETLSRLGFEDVELRLSH----SQ 165
Query: 985 RKKYCIDLI--NYIKKHKDSKWFCE-DI---------KHSLYLNSLRVLDSKNL---IIR 1029
K + + N ++HK + D+ K L+ ++++K ++
Sbjct: 166 LIKAVLAQLEPNADEQHKIFDQLLDGDVALMSRLEAEKPELFRTLKLLMENKGTSAAFLK 225
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKL 1089
++ A LE+ D G+ +L+ +SY+I+ +G +YY +F +
Sbjct: 226 NVMAMAGAAGGDLEEPLNDFIAGVD-VLDKLGVSYQIDLASGKGFEYYTGVIFHLFVN-- 282
Query: 1090 GSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHV 1149
G + GGGRYD LI PA+GFA+ + RLI +I ++ + I I +
Sbjct: 283 GEH--VGGGGRYDKLIPLLGGPDKPAAGFALYLNRLIPMIDAEDMYDMVEEK--ILIKYE 338
Query: 1150 GKEAELKAFVLSENLRTLGLKVIL 1173
G + A+ ++ +R G+ L
Sbjct: 339 GDNLK-NAYEMANLIRECGISAEL 361
>TAIR|locus:2018832 [details] [associations]
symbol:AT1G17410 species:3702 "Arabidopsis thaliana"
[GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006165 "nucleoside
diphosphate phosphorylation" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
EMBL:CP002684 GO:GO:0005524 GO:GO:0006183 GO:GO:0004550 KO:K00940
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 IPI:IPI00546860 RefSeq:NP_173184.2 UniGene:At.41837
ProteinModelPortal:F4I7J3 SMR:F4I7J3 EnsemblPlants:AT1G17410.1
GeneID:838313 KEGG:ath:AT1G17410 OMA:KNCVHGS Uniprot:F4I7J3
Length = 181
Score = 168 (64.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 43/116 (37%), Positives = 59/116 (50%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RT ++I D + N EI + G I+ + +L K FY H +R FF +LV
Sbjct: 34 RTLAMIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSFFPHLV 93
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKG---TIRADFAESIDKNIVH 534
+M SGPV + VLE +A+ R LIG TD KA +IRA ++ KN VH
Sbjct: 94 TYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHPHSIRALCGKNSQKNCVH 149
>TIGR_CMR|NSE_0717 [details] [associations]
symbol:NSE_0717 "tRNA modification GTPase TrmE"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 SMART:SM00382
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872
GO:GO:0003924 GO:GO:0006400 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:YP_506593.1 ProteinModelPortal:Q2GD53 STRING:Q2GD53
GeneID:3931628 KEGG:nse:NSE_0717 PATRIC:22681449 OMA:IEAHIIT
ProtClustDB:CLSK2528116 BioCyc:NSEN222891:GHFU-729-MONOMER
Uniprot:Q2GD53
Length = 550
Score = 190 (71.9 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 47/115 (40%), Positives = 65/115 (56%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E V IVGKPNVGKSTL N L + I D PGTTRD ++ + + IL DTAGI
Sbjct: 211 EGFSVVIVGKPNVGKSTLFNYLAKRDLAIVTDIPGTTRDILEVRLDCHGYPVILSDTAGI 270
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ----NISAQDINIANFIYE 291
+ +T + IEK + + LK EA+V++ L D + N+ +D+ AN + E
Sbjct: 271 Q---ETCDAIEKMGITRALKKATEADVIVFLRDITELHLTNVRREDV--ANSVIE 320
>TIGR_CMR|BA_4524 [details] [associations]
symbol:BA_4524 "GTP-binding protein Era" species:198094
"Bacillus anthracis str. Ames" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20
InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814 HOGENOM:HOG000245596
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
RefSeq:NP_846747.1 RefSeq:YP_021170.1 RefSeq:YP_030447.1
ProteinModelPortal:Q81LT7 DNASU:1088253
EnsemblBacteria:EBBACT00000009432 EnsemblBacteria:EBBACT00000018443
EnsemblBacteria:EBBACT00000022023 GeneID:1088253 GeneID:2819016
GeneID:2848213 KEGG:ban:BA_4524 KEGG:bar:GBAA_4524 KEGG:bat:BAS4199
BioCyc:BANT260799:GJAJ-4255-MONOMER
BioCyc:BANT261594:GJ7F-4400-MONOMER Uniprot:Q81LT7
Length = 301
Score = 171 (65.3 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 39/121 (32%), Positives = 72/121 (59%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR-R 243
V+I+G+PNVGKST +N ++G+ I D P TTR+ I+ ++ N+ + I IDT GI + +
Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK 70
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
+K + + K + TLK E ++V+ +++A + + I + E+ + + + +NK
Sbjct: 71 HKLGDFMVKMAQT-TLK---EVDIVLFMVNAVEGFGRGEEFIIEKLKETKQPVFLVINKI 126
Query: 304 D 304
D
Sbjct: 127 D 127
Score = 129 (50.5 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF-EPEVK 65
++GRPNVGKST NR+ + A++++ P TR++ G I IDT G +P+ K
Sbjct: 13 IIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPKHK 72
Query: 66 KGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
G M K + V+ +G ++ I L+++ QP+ LV
Sbjct: 73 LGDF--MVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQPVFLV 122
Score = 55 (24.4 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 375 HPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLEK--YFYRTFSLIDAL 432
HP +LI + R H + PI + GN + + K+YL + +Y + D
Sbjct: 130 HPEQLLELI-DQYRKLHDFAEIVPISALDGNNAEALIGTIKKYLPEGPQYYPDNQVTDHP 188
Query: 433 EKNIVGEIYNRYEKI 447
E+ I+ E+ EK+
Sbjct: 189 ERFIIAELIR--EKV 201
>UNIPROTKB|A2IDD0 [details] [associations]
symbol:NME4 "Nucleoside diphosphate kinase" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005739 GO:GO:0005524 EMBL:CH471112 EMBL:AL023881
GO:GO:0006183 GO:GO:0004550 HOGENOM:HOG000224564 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469
HOVERGEN:HBG000423 EMBL:Z97634 UniGene:Hs.9235 HGNC:HGNC:7852
ChiTaRS:NME4 IPI:IPI00853259 SMR:A2IDD0 STRING:A2IDD0
Ensembl:ENST00000397722 Ensembl:ENST00000450036 Uniprot:A2IDD0
Length = 117
Score = 165 (63.1 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 456 MKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA 515
M + ++ + + Y + +PF+ L+ +M SGPV V EG + ++ R +IG TD +A
Sbjct: 3 MLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEA 62
Query: 516 AKGTIRADFAESIDKNIVHELGEMPFRAKQLQKW 549
A GTIR DF+ I +N++H + +++Q W
Sbjct: 63 APGTIRGDFSVHISRNVIHASDSVEGAQREIQLW 96
>TIGR_CMR|CHY_0430 [details] [associations]
symbol:CHY_0430 "GTP-binding protein Era" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
OMA:ITREQLF SUPFAM:SSF54814 eggNOG:COG1159 HOGENOM:HOG000245596
KO:K03595 TIGRFAMs:TIGR00436 RefSeq:YP_359291.1
ProteinModelPortal:Q3AEZ3 STRING:Q3AEZ3 GeneID:3728261
KEGG:chy:CHY_0430 PATRIC:21274021
BioCyc:CHYD246194:GJCN-431-MONOMER Uniprot:Q3AEZ3
Length = 298
Score = 183 (69.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 51/165 (30%), Positives = 83/165 (50%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR-R 243
V+IVG+PNVGKSTL+N ++G I D P TTR+ I+++ + I IDT G+++ R
Sbjct: 8 VSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPGVQKPR 67
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
NK E F + + L S+ E +V++ +++A I Q+ + + E +I+ VNK
Sbjct: 68 NKLGE----FMLKQALTSLDEVDVLLYVVEANSPIGPQENYLLKTLAEVKTPIILVVNKI 123
Query: 304 DSXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMESI 348
D L A +ISA+ ++ +E I
Sbjct: 124 DVVKMIEAQTLARQIESR---LKVAKTYYISALNGTGVSELVEGI 165
Score = 134 (52.2 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE-PEVK 65
+VGRPNVGKSTL N++ ++ A++++ P TR++ K I IDT G + P K
Sbjct: 10 IVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPGVQKPRNK 69
Query: 66 KGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXXXX 125
G M KQ + V+ + Q+ + L + PI+LV
Sbjct: 70 LGEF--MLKQALTSLDEVDVLLYVVEANSPIGPQENYLLKTLAEVKTPIILVVNKIDVVK 127
Query: 126 XXXXLDFYE-----LGIGNPHIISALYGNGIKNFLENILTIELP 164
L + + ISAL G G+ +E I + LP
Sbjct: 128 MIEAQTLARQIESRLKVAKTYYISALNGTGVSELVEGIFEL-LP 170
Score = 38 (18.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 17/77 (22%), Positives = 32/77 (41%)
Query: 486 SGPVFIQVLEGEDAIKKHRILIGDTDP-IKAAKGTIRADFAESIDKNIVHELG---EMPF 541
S V++ + + + I+IG +K R + + NI +L + +
Sbjct: 223 SNTVYVSAVIYVERESQKGIIIGKNGQMLKEIGQRARLEIERLLGSNIYLDLWVKVKEDW 282
Query: 542 RAKQLQKWIHKFGVSDF 558
R K + WI FG ++F
Sbjct: 283 RNKDV--WIRNFGFTEF 297
>TIGR_CMR|CPS_4121 [details] [associations]
symbol:CPS_4121 "GTP-binding protein Era" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_270776.1
ProteinModelPortal:Q47WP6 SMR:Q47WP6 STRING:Q47WP6 GeneID:3521211
KEGG:cps:CPS_4121 PATRIC:21471105
BioCyc:CPSY167879:GI48-4134-MONOMER Uniprot:Q47WP6
Length = 305
Score = 178 (67.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+AIVG+PNVGKSTL+N+LLG+ IT P TTR I + N++ +L+DT G+
Sbjct: 13 IAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPGLHTEE 72
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
K I + SI E +++ L++ + + D + + + +SG I+ VNK D
Sbjct: 73 K--RAINRLMNRAASSSIAEVELIMFLVEGT-HWTKDDELVLSKVKQSGTPCILVVNKTD 129
Query: 305 S 305
+
Sbjct: 130 N 130
Score = 152 (58.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 59/246 (23%), Positives = 103/246 (41%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ +VGRPNVGKSTL N L + ++ + P TR R G + +++DT G E
Sbjct: 12 LIAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPGLHTE 71
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVLVXXXXXX 123
K+ I M + + V+G + D+L+ + +++SG P +LV
Sbjct: 72 EKRAINRLMNRAASSSIAEVELIMFLVEGTHW-TKDDELVLSKVKQSGTPCILVVNKTDN 130
Query: 124 XXXXXXLDFYELGIGNPHI------ISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
L + +G H I A G+G+ + LT LP F+ ++
Sbjct: 131 IPDKDELLPHLQKLGAMHDFRDIVPICATKGHGVDTIRQLCLT-SLPEGVFWFPEDHITD 189
Query: 178 HSIEYIKVAIVGKPNVGKS--TLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
S ++ I+ + + + L S+ E D G + L E +++K ++I
Sbjct: 190 RSSRFMASEIIREKLIRFTGDELPYSITVEIEQFKMDDKGIIHINALILVERDSQKRMVI 249
Query: 236 DTAGIR 241
G R
Sbjct: 250 GNKGER 255
Score = 44 (20.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 404 GNRLKYIGNDYKRYLEKYF 422
G RLK IG + +R +E F
Sbjct: 253 GERLKTIGQEARRDMENLF 271
>TAIR|locus:2075472 [details] [associations]
symbol:AT3G02760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0004821
"histidine-tRNA ligase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005829 GO:GO:0005524
EMBL:CP002686 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 KO:K01892 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 IPI:IPI00521766 RefSeq:NP_186925.4
UniGene:At.43888 UniGene:At.69029 ProteinModelPortal:F4IYF8
SMR:F4IYF8 PRIDE:F4IYF8 EnsemblPlants:AT3G02760.1 GeneID:820930
KEGG:ath:AT3G02760 OMA:ICVENEN ArrayExpress:F4IYF8 Uniprot:F4IYF8
Length = 883
Score = 143 (55.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 1044 KDSLDHFYGIQKILNYNNISYKI--NTKLVRGMDYYNRTVFEWTTDKLGSQ-NSICGGGR 1100
+++LD + + L + S +I + L RG+DYY +FE +G++ SI GGR
Sbjct: 686 REALDELSIMFEALKRSKCSERIVFDLSLARGLDYYTGVIFEAVC--IGAEVGSIGAGGR 743
Query: 1101 YDFLIKKFSNKFVPASGFAIGIERLIELIKKIN 1133
YD LI F K VPA G ++GIER+ +++++N
Sbjct: 744 YDNLIGMFGTKQVPAVGMSLGIERVFNIMEELN 776
Score = 96 (38.9 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE++ +V Y D+ G+ SLR + T R V N + KR + ++R +
Sbjct: 498 GEDSKLV----YDIADQ-GGELCSLRYDLTVPFARYVAMNGIT--SFKR-YQIAKVYRRD 549
Query: 928 RPQYGRYRQFYQIGVEAIGF--P-GPDIDAELIIMCSRLWKNLNLKNICLELN 977
P GRYR+FYQ + G P GPD E++ + + L L + + ++LN
Sbjct: 550 NPSKGRYREFYQCDFDIAGLFEPMGPDF--EIVKILTELLDELEIGDYEVKLN 600
Score = 42 (19.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 54 IIDTGGFEPEVKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQP 113
+++ G PE + I + K KQ+ G + D+ I NF+++ G P
Sbjct: 608 MLEICGVPPEKFRTICSSIDKLDKQSFEQVKKEMVEEKGLSSEIA-DR-IGNFVKEKGAP 665
Query: 114 IVLV 117
+ L+
Sbjct: 666 LELL 669
>UNIPROTKB|P75104 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:272634
"Mycoplasma pneumoniae M129" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264
GO:GO:0046872 GO:GO:0003924 GO:GO:0006400 EMBL:U00089
GenomeReviews:U00089_GR eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 OMA:IDFPEEV PIR:S73472 RefSeq:NP_109696.1
ProteinModelPortal:P75104 IntAct:P75104 GeneID:877349
KEGG:mpn:MPN008 PATRIC:20021289 BioCyc:MPNE272634:GJ6Z-8-MONOMER
Uniprot:P75104
Length = 442
Score = 180 (68.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 40/93 (43%), Positives = 59/93 (63%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
K+AI+G NVGKS+L+N+LL +++ I G+TRD ++ F N ++DTAGIR+
Sbjct: 219 KIAIIGNTNVGKSSLLNALLDQDKAIVSAIKGSTRDIVEGDFALNGHFVKILDTAGIRQH 278
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
+EK + KT +I AN+VI LLDA+Q
Sbjct: 279 QSA---LEKAGIQKTFGAIKTANLVIYLLDARQ 308
>TAIR|locus:2029406 [details] [associations]
symbol:AT1G78010 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006897 "endocytosis" evidence=RCA]
HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0007264 GO:GO:0003924 GO:GO:0005622
GO:GO:0006400 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HOGENOM:HOG000200713 OMA:IDFPEEV EMBL:BT015351 EMBL:BT015722
IPI:IPI00546429 RefSeq:NP_177924.3 UniGene:At.21626
ProteinModelPortal:Q66GQ1 SMR:Q66GQ1 STRING:Q66GQ1 PaxDb:Q66GQ1
PRIDE:Q66GQ1 EnsemblPlants:AT1G78010.1 GeneID:844136
KEGG:ath:AT1G78010 TAIR:At1g78010 InParanoid:Q66GQ1
PhylomeDB:Q66GQ1 ProtClustDB:CLSN2680810 Genevestigator:Q66GQ1
Uniprot:Q66GQ1
Length = 560
Score = 181 (68.8 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 41/122 (33%), Positives = 72/122 (59%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+++AIVG+PNVGKS+L+N+ R I + GTTRD +++ L+DTAGIR
Sbjct: 318 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLLDTAGIRE 377
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
N +++EK V ++ + A+V+I+ + A + + +D + I +S + +I+ +NK
Sbjct: 378 TN---DIVEKIGVERSETAAKVADVIIMAVSAVEGWTEEDTELLRKI-QSDKPMILVMNK 433
Query: 303 WD 304
D
Sbjct: 434 ID 435
>UNIPROTKB|E1BXX8 [details] [associations]
symbol:TXNDC3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045454 "cell redox homeostasis" evidence=IEA]
[GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IEA]
InterPro:IPR001564 InterPro:IPR013766 InterPro:IPR017937
Pfam:PF00085 Pfam:PF00334 PROSITE:PS00194 SMART:SM00562
GO:GO:0005524 GO:GO:0015630 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0045454 PROSITE:PS51352 GO:GO:0006183
GO:GO:0004550 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
PANTHER:PTHR11349 SUPFAM:SSF54919 GeneTree:ENSGT00700000104331
OMA:SLCAQFA EMBL:AADN02001324 EMBL:AADN02001325 IPI:IPI00579910
ProteinModelPortal:E1BXX8 Ensembl:ENSGALT00000019730 Uniprot:E1BXX8
Length = 592
Score = 179 (68.1 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 49/130 (37%), Positives = 73/130 (56%)
Query: 412 NDYKRYLEKYFYR--TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
ND ++ LE +F + T +LI DA KN EI + + G I + L++ +F
Sbjct: 442 NDAQKELEFFFPQEHTLALIKPDAA-KNHKDEIMQKVKDAGFTISKVKEEALTREMATQF 500
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKG---TIRADF 524
Y H+ +PFF+ LV+ M GP I VL E+A+++ R L+G TDP A + +IRA F
Sbjct: 501 YKDHEGKPFFEELVSCMTEGPSVIMVLTKENAVQEWRKLMGPTDPEVAKESCPESIRAQF 560
Query: 525 AESIDKNIVH 534
A++I N VH
Sbjct: 561 AQNILSNAVH 570
>TIGR_CMR|BA_3376 [details] [associations]
symbol:BA_3376 "histidyl-tRNA synthetase" species:198094
"Bacillus anthracis str. Ames" [GO:0004821 "histidine-tRNA ligase
activity" evidence=ISS] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=ISS] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 RefSeq:NP_845662.1 RefSeq:YP_020009.1 RefSeq:YP_029387.1
ProteinModelPortal:Q81N41 PRIDE:Q81N41 DNASU:1084846
EnsemblBacteria:EBBACT00000009540 EnsemblBacteria:EBBACT00000015380
EnsemblBacteria:EBBACT00000023769 GeneID:1084846 GeneID:2818918
GeneID:2850350 KEGG:ban:BA_3376 KEGG:bar:GBAA_3376 KEGG:bat:BAS3130
HOGENOM:HOG000018071 OMA:NKIKRAC ProtClustDB:PRK12420
BioCyc:BANT260799:GJAJ-3192-MONOMER
BioCyc:BANT261594:GJ7F-3301-MONOMER GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 Uniprot:Q81N41
Length = 425
Score = 175 (66.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 90/325 (27%), Positives = 147/325 (45%)
Query: 872 DIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY 931
D + KE+Y+ D+ D L+LR + T + V N I KR + G +FR +
Sbjct: 58 DEILKEIYTLQDQGKRD-LALRYDLTIPFAKVVAMNPNIRLPFKR-YEIGKVFRDGPIKQ 115
Query: 932 GRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNS-------IGNFNE 984
GR+R+F Q V+ +G +AEL+ M L++ LNL+ + ++ N+ + N
Sbjct: 116 GRFREFIQCDVDIVGVESVMAEAELMSMAFELFQTLNLE-VTIQYNNRKLLNGILQAINI 174
Query: 985 RKKYCIDLI---NYIKK------HKD--SKWFCEDIKHSLYLNSLRVLDSKNLIIREILI 1033
+ D+I + I+K KD + E++ ++ L L +E
Sbjct: 175 PTELTSDVILSLDKIEKIGIDGVRKDVLERGISEEMADTICNTVLSCLQLSIADFKEAF- 233
Query: 1034 NAPKLLDYL-EKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGS- 1091
N P + D + E L Y I +N N I N L RG+ Y TV+E K GS
Sbjct: 234 NNPLVADGVNELQQLQQ-YLIALGINENTI---FNPFLARGLTMYTGTVYEIFL-KDGSI 288
Query: 1092 QNSICGGGRYDFLIKKF--SNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHV 1149
+SI GGRYD +I F + P G + G++ + + + S D++I+ +
Sbjct: 289 TSSIGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ---KETISSTADVFIIPL 345
Query: 1150 GKEAELKAFVLSENLR-TLGLKVIL 1173
G EL+ +++ LR T LK+ L
Sbjct: 346 G--TELQCLQIAQQLRSTTSLKIEL 368
>TIGR_CMR|CBU_1922 [details] [associations]
symbol:CBU_1922 "tRNA modification GTPase TrmE"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0003924
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ ProtClustDB:PRK05291 EMBL:Y10436 RefSeq:NP_820899.1
ProteinModelPortal:P94612 GeneID:1209835 KEGG:cbu:CBU_1922
PATRIC:17932577 BioCyc:CBUR227377:GJ7S-1896-MONOMER Uniprot:P94612
Length = 452
Score = 185 (70.2 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 57/176 (32%), Positives = 88/176 (50%)
Query: 132 FYELGIGNPHI-ISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGK 190
+ E I P I L IK LEN+ +K K+ E I V I G+
Sbjct: 169 YIEASIDFPEEEIDFLADERIKETLENLTHQVQEIEKTAKQGALLR----EGITVVIAGE 224
Query: 191 PNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVI 250
PNVGKS+L+N L G+ I D GTTRD I+ + ++DTAG+R T +V+
Sbjct: 225 PNVGKSSLLNLLSGQETAIVTDIAGTTRDIIRESIHIDGLPIHVVDTAGLRL---TEDVV 281
Query: 251 EKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL--IVCVNKWD 304
EK V +T K++ +A++++L++DA + IA + E+ + ++ NK D
Sbjct: 282 EKEGVRRTQKAVQQADLLLLMIDASKPTEDFKKIIAQWFSENDNKIPTLIVENKID 337
Score = 40 (19.1 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 358 HLSTSRITRALISAIKNH 375
H+ S TRA + +KNH
Sbjct: 352 HIKLSVKTRAGVELLKNH 369
Score = 37 (18.1 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 859 INAACGQLSGEETDIVKKEMYSFIDELNGDNL 890
+N G+L E+ + + + E D+L
Sbjct: 409 LNQKAGELVAEDLKLAQNALSEITGEFTSDDL 440
>UNIPROTKB|F1N6T4 [details] [associations]
symbol:NME4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005739 GO:GO:0005524 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 GeneTree:ENSGT00700000104244 EMBL:DAAA02057277
IPI:IPI00693558 Ensembl:ENSBTAT00000047964 Uniprot:F1N6T4
Length = 255
Score = 163 (62.4 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 31/92 (33%), Positives = 55/92 (59%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG++ R+E+ G K++ M + + + + Y + +PF+ L+++M SGPV
Sbjct: 47 DGVQRRLVGDVIRRFERRGFKLVGMKMLQAPERILAEHYHDLQRKPFYPALISYMSSGPV 106
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIR 521
V EG + + R +IG T+ KAA GTIR
Sbjct: 107 VAMVWEGPNVVCTSRAMIGHTNSAKAAPGTIR 138
>WB|WBGene00009557 [details] [associations]
symbol:F39B2.7 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] [GO:0015093 "ferrous iron transmembrane
transporter activity" evidence=IEA] [GO:0015684 "ferrous iron
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0005622 GO:GO:0006400
HSSP:P25522 eggNOG:COG0486 HOGENOM:HOG000200714 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:Z92834 PIR:T21994
RefSeq:NP_493573.1 ProteinModelPortal:Q9XTZ1 SMR:Q9XTZ1
IntAct:Q9XTZ1 STRING:Q9XTZ1 PaxDb:Q9XTZ1 EnsemblMetazoa:F39B2.7.1
EnsemblMetazoa:F39B2.7.2 GeneID:3564835 KEGG:cel:CELE_F39B2.7
UCSC:F39B2.7 CTD:3564835 WormBase:F39B2.7 InParanoid:Q9XTZ1
NextBio:954161 Uniprot:Q9XTZ1
Length = 439
Score = 169 (64.5 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 43/127 (33%), Positives = 75/127 (59%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ + + G+PN GKS+++N L ++ I PGTTRDS++++ + N + L DTAG+R+
Sbjct: 211 LDIVLYGRPNSGKSSILNQLAHDDVAIVSSIPGTTRDSLETIIQINGVRCRLTDTAGVRQ 270
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDI-NIANFIYESGRS----LI 297
KT +VIE + + K I A+++ +++D Q S D+ +I N + E R+ +I
Sbjct: 271 --KTNDVIEAEGIRRAQKRIQSADIICVVVDPQFT-SDDDVESILNDV-EVMRNREARVI 326
Query: 298 VCVNKWD 304
+ NK D
Sbjct: 327 IAKNKSD 333
>UNIPROTKB|Q9KPB3 [details] [associations]
symbol:era "GTPase Era" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0042254
GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ PIR:A82073 RefSeq:NP_232089.1 ProteinModelPortal:Q9KPB3
SMR:Q9KPB3 DNASU:2613002 GeneID:2613002 KEGG:vch:VC2460
PATRIC:20083941 Uniprot:Q9KPB3
Length = 325
Score = 164 (62.8 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VAIVG+PNVGKSTL+N+LLG+ IT P TTR I + N + I +DT G+
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
K I + S+ + N+V+ +++ + +A D + + ++ +++CVNK D
Sbjct: 94 K--RAINRLMNRAASSSLSDVNLVLFVVEGT-HWTADDEMVFTKLQKANFPVVLCVNKVD 150
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/112 (31%), Positives = 52/112 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + ++ + P TR R G G I +DT G E
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
K+ I M + + V+G + + + T L+K+ P+VL
Sbjct: 94 KRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTK-LQKANFPVVL 144
>TIGR_CMR|VC_2460 [details] [associations]
symbol:VC_2460 "GTP-binding protein Era" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ PIR:A82073 RefSeq:NP_232089.1 ProteinModelPortal:Q9KPB3
SMR:Q9KPB3 DNASU:2613002 GeneID:2613002 KEGG:vch:VC2460
PATRIC:20083941 Uniprot:Q9KPB3
Length = 325
Score = 164 (62.8 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VAIVG+PNVGKSTL+N+LLG+ IT P TTR I + N + I +DT G+
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
K I + S+ + N+V+ +++ + +A D + + ++ +++CVNK D
Sbjct: 94 K--RAINRLMNRAASSSLSDVNLVLFVVEGT-HWTADDEMVFTKLQKANFPVVLCVNKVD 150
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/112 (31%), Positives = 52/112 (46%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + ++ + P TR R G G I +DT G E
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
K+ I M + + V+G + + + T L+K+ P+VL
Sbjct: 94 KRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTK-LQKANFPVVL 144
>CGD|CAL0004408 [details] [associations]
symbol:orf19.2042 species:5476 "Candida albicans" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:1900524 "positive
regulation of flocculation via cell wall protein-carbohydrate
interaction by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070899 "mitochondrial
tRNA wobble uridine modification" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 CGD:CAL0004408 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0005622 GO:GO:0006400 EMBL:AACQ01000031
EMBL:AACQ01000030 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:XP_719491.1 RefSeq:XP_719616.1 ProteinModelPortal:Q5AD25
STRING:Q5AD25 GeneID:3638773 GeneID:3638809 KEGG:cal:CaO19.2042
KEGG:cal:CaO19.9590 Uniprot:Q5AD25
Length = 529
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/157 (27%), Positives = 85/157 (54%)
Query: 151 IKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVIT 210
I++ ENI IE K + K + + I + I++A++G PN GKS+++N L ++ I
Sbjct: 249 IRDVKENIAKIESEIKAYLSKVKSSQI-LLNGIQLALLGPPNAGKSSILNILANKDAAIV 307
Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
+ GTTRD + E K ++ DTAGIR + + IE+ + + + + A+ VI+
Sbjct: 308 SEIAGTTRDILDIPLEIGGYKVVVGDTAGIRSFEEA-DSIEQEGIKRAKQRSMLADFVIV 366
Query: 271 LLDAQQNISAQDINIANFI---YESGRSLIVCVNKWD 304
+LD ++ + + + + ++ + +++ +NK D
Sbjct: 367 VLDPM-SVEKEPLELKEHLKTLVKANKQMLIVLNKQD 402
>UNIPROTKB|G1K159 [details] [associations]
symbol:NME7 "Nucleoside diphosphate kinase 7" species:9913
"Bos taurus" [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 InterPro:IPR006602 PROSITE:PS51336
GO:GO:0006183 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
GeneTree:ENSGT00700000104331 EMBL:DAAA02042848 EMBL:DAAA02042846
EMBL:DAAA02042847 Ensembl:ENSBTAT00000003483 Uniprot:G1K159
Length = 197
Score = 144 (55.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/155 (29%), Positives = 73/155 (47%)
Query: 407 LKYIGNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKND 463
L Y G+ Y R L +T +LI DA+ K GEI K G + M LS+ +
Sbjct: 40 LDY-GDQYTARQLGSKKEKTLALIKPDAVSK--AGEIIEIINKAGFTLTKLKMMTLSRKE 96
Query: 464 VEKFYSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTI 520
F+ H++RPF L+ F+ SGP+ + +DA+ + + L+G + A A +I
Sbjct: 97 ATDFHIDHQSRPFLNELIQFITSGPIIAMEILRDDAVCEWKRLLGPANSGLARTDAPESI 156
Query: 521 RADFAESIDKNIVHELGEMPFRAKQLQKWIHKFGV 555
RA F KN H A++++ + K+ V
Sbjct: 157 RALFGTDGIKNAAHGPDSFACAAREMELFFFKWSV 191
>DICTYBASE|DDB_G0274159 [details] [associations]
symbol:hisS "histidine-tRNA ligase" species:44689
"Dictyostelium discoideum" [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA;ISS] [GO:0006418 "tRNA aminoacylation
for protein translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004821
"histidine-tRNA ligase activity" evidence=IEA;ISS] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR004516 InterPro:IPR006195 InterPro:IPR015807
PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154
dictyBase:DDB_G0274159 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000151_GR EMBL:AAFI02000012 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124
KO:K01892 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
OMA:RGERAQK RefSeq:XP_644303.1 ProteinModelPortal:Q86AS6
STRING:Q86AS6 PRIDE:Q86AS6 EnsemblProtists:DDB0231332
GeneID:8619731 KEGG:ddi:DDB_G0274159 ProtClustDB:CLSZ2431052
Uniprot:Q86AS6
Length = 481
Score = 134 (52.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 1070 LVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELI 1129
L RG+DYY ++E SI GGRYD L+ + K VPA GF+IGIER+ ++
Sbjct: 308 LARGLDYYTGIIYEAVLTGQDRVGSIAAGGRYDGLVGMYGKKDVPAVGFSIGIERIFTIL 367
Query: 1130 ----KKIN--INHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGL 1169
KK N I N + +++V + K+ + + L G+
Sbjct: 368 EDEYKKENKKIRENATQ---VFVVQMEKDLIKERLAIVSELWKAGI 410
Score = 82 (33.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERP--QYGR 933
K +Y D+ G+ SLR + T R V N ++ KR ++ ++R + P GR
Sbjct: 95 KLIYDLQDQ-GGEICSLRYDLTVPFARYVAMNGVL--NIKR-YHIARVYRRDNPIMTKGR 150
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELIIMCSRLWKNLNLKNICLELN 977
+R+FYQ + G + DAE ++M + + + + + ++LN
Sbjct: 151 FREFYQCDFDIAGTYDLMVPDAECLVMICEILEQVKVGDFQIKLN 195
>RGD|1308952 [details] [associations]
symbol:Rab11fip3 "RAB11 family interacting protein 3 (class II)"
species:10116 "Rattus norvegicus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0005825 "half bridge of spindle pole
body" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=ISO] [GO:0030306 "ADP-ribosylation factor
binding" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
[GO:0032154 "cleavage furrow" evidence=ISO] [GO:0032456 "endocytic
recycling" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0055037 "recycling endosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000597 InterPro:IPR001564 InterPro:IPR002048
InterPro:IPR002198 Pfam:PF00106 Pfam:PF00297 Pfam:PF00334
PRINTS:PR01243 PROSITE:PS50222 SMART:SM00562 InterPro:IPR016040
RGD:1308952 RGD:1591334 RGD:71002 GO:GO:0005739 GO:GO:0005524
GO:GO:0032403 Gene3D:3.40.50.720 GO:GO:0006412 GO:GO:0016491
GO:GO:0005840 GO:GO:0003735 GO:GO:0055114 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 SUPFAM:SSF54919 InterPro:IPR019926
PROSITE:PS00474 EMBL:AC126071 UniGene:Rn.17377 EMBL:AY383698
IPI:IPI00421361 HSSP:P15531 SMR:Q6TXF6 STRING:Q6TXF6
Ensembl:ENSRNOT00000027501 Genevestigator:Q6TXF6 Uniprot:Q6TXF6
Length = 867
Score = 182 (69.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 35/104 (33%), Positives = 63/104 (60%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG + +R+E+ G K++ M + ++ + + Y + +PF+ L+++M SGPV
Sbjct: 45 DGVQRRLVGTVIHRFERRGFKLVGMKMLQAPESILAEHYRDLQRKPFYPALISYMSSGPV 104
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIV 533
V EG + + R +IG TD +AA GTIR DF+ I ++ V
Sbjct: 105 VAMVWEGHNVVHISRAMIGHTDSTEAAPGTIRGDFSVHISRDKV 148
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 547 QKWIHKFG-VSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDG----TRKWIFHVK 601
Q ++ K G ++ N TD +S R ++ + +D + +G T+K + ++
Sbjct: 428 QGYLIKDGKLTKNNASTDYDLSDRSINPLGGFVHYGEVTNDFLMLEGCVVGTKKRVLTLR 487
Query: 602 KNIIE 606
K+++E
Sbjct: 488 KSLLE 492
>RGD|1591334 [details] [associations]
symbol:Nme4 "NME/NM23 nucleoside diphosphate kinase 4"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA;ISO] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IDA]
InterPro:IPR000597 InterPro:IPR001564 InterPro:IPR002048
InterPro:IPR002198 Pfam:PF00106 Pfam:PF00297 Pfam:PF00334
PRINTS:PR01243 PROSITE:PS50222 SMART:SM00562 InterPro:IPR016040
RGD:1308952 RGD:1591334 RGD:71002 GO:GO:0005739 GO:GO:0005524
GO:GO:0032403 Gene3D:3.40.50.720 GO:GO:0006412 GO:GO:0016491
GO:GO:0005840 GO:GO:0003735 GO:GO:0055114 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 SUPFAM:SSF54919 InterPro:IPR019926
PROSITE:PS00474 EMBL:AC126071 UniGene:Rn.17377 EMBL:AY383698
IPI:IPI00421361 HSSP:P15531 SMR:Q6TXF6 STRING:Q6TXF6
Ensembl:ENSRNOT00000027501 Genevestigator:Q6TXF6 Uniprot:Q6TXF6
Length = 867
Score = 182 (69.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 35/104 (33%), Positives = 63/104 (60%)
Query: 430 DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMISGPV 489
D +++ +VG + +R+E+ G K++ M + ++ + + Y + +PF+ L+++M SGPV
Sbjct: 45 DGVQRRLVGTVIHRFERRGFKLVGMKMLQAPESILAEHYRDLQRKPFYPALISYMSSGPV 104
Query: 490 FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIV 533
V EG + + R +IG TD +AA GTIR DF+ I ++ V
Sbjct: 105 VAMVWEGHNVVHISRAMIGHTDSTEAAPGTIRGDFSVHISRDKV 148
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 547 QKWIHKFG-VSDFNKMTDLSMSLRKKLKNSVYIKAPHIMSDQISFDG----TRKWIFHVK 601
Q ++ K G ++ N TD +S R ++ + +D + +G T+K + ++
Sbjct: 428 QGYLIKDGKLTKNNASTDYDLSDRSINPLGGFVHYGEVTNDFLMLEGCVVGTKKRVLTLR 487
Query: 602 KNIIE 606
K+++E
Sbjct: 488 KSLLE 492
>ZFIN|ZDB-GENE-000210-35 [details] [associations]
symbol:nme7 "non-metastatic cells 7, protein
expressed in (nucleoside-diphosphate kinase)" species:7955 "Danio
rerio" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006165 "nucleoside
diphosphate phosphorylation" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001564
InterPro:IPR011410 Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243
SMART:SM00562 ZFIN:ZDB-GENE-000210-35 GO:GO:0005524
InterPro:IPR006602 SMART:SM00676 PROSITE:PS51336 GO:GO:0006183
GO:GO:0004550 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 CTD:29922 HOVERGEN:HBG006457
HSSP:P15266 EMBL:AF202055 IPI:IPI00515921 RefSeq:NP_571004.1
UniGene:Dr.73782 ProteinModelPortal:Q9PTF2 STRING:Q9PTF2
GeneID:30086 KEGG:dre:30086 InParanoid:Q9PTF2 NextBio:20806571
ArrayExpress:Q9PTF2 Uniprot:Q9PTF2
Length = 374
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/155 (30%), Positives = 75/155 (48%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RT ++I DA+ K VG+I L + A M KL+ FY H+++ FF NLV
Sbjct: 91 RTLAMIKPDAVSK--VGDIIQMIYDANLIVTKAKMTKLTWKQAADFYMEHQSKSFFNNLV 148
Query: 482 NFMISGPVFIQVLEGEDAIKKHRILIGDTDP---IKAAKGTIRADFAESIDKNIVHELGE 538
F+ SGPV L G++A+ R ++G TD K A ++R F KN H
Sbjct: 149 QFVSSGPVIAMELMGDEAVSTWRKVLGPTDSGVAQKEAAHSLRGQFGTDGTKNAGHGSDS 208
Query: 539 MPFRAKQLQKWIHK---FGVSDFNKMTDLSMSLRK 570
+ A++L+ + G+S+ K +D + + K
Sbjct: 209 LASAARELEYFFPSTAGHGLSNTAKYSDCTCCIIK 243
>DICTYBASE|DDB_G0288609 [details] [associations]
symbol:eral1 "GTP-binding protein era homolog"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0288609 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 EMBL:AAFI02000118 RefSeq:XP_636640.1
ProteinModelPortal:Q54IP6 STRING:Q54IP6 EnsemblProtists:DDB0219361
GeneID:8626714 KEGG:ddi:DDB_G0288609 InParanoid:Q54IP6 OMA:DAVKRPT
Uniprot:Q54IP6
Length = 398
Score = 160 (61.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 175 TNIHS--IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKY 232
T IH+ + + VAI+G PN GKSTL+NS++GE T TTRD++ ++ ++ +
Sbjct: 105 TPIHNENAKTLNVAIIGAPNAGKSTLVNSIVGEKICAVSPTEHTTRDAVLGIYSKDDTQI 164
Query: 233 ILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES 292
+ DT GI + + +F V + EA++V+L++DA N S+ I + E
Sbjct: 165 LFHDTPGIIKNFNRMAHVREF-VNLAWGVVKEADIVLLVVDATNNNSSDTEFIVGKLEEQ 223
Query: 293 GRSLI 297
+LI
Sbjct: 224 MLNLI 228
Score = 48 (22.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 31/135 (22%), Positives = 58/135 (42%)
Query: 480 LVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRAD-FAESIDKNI-VHELG 537
+VN + FI V+ D +KK L+ + +G I D F S NI V +L
Sbjct: 253 IVNDSLDEKEFILVVNKVDLVKKKETLVQMISQLN--EGNIFTDTFIVSATSNIRVEDLT 310
Query: 538 EMPF-RAKQLQ-KWIHKFGV--SDFNKMTDLSMSLRKKLKNSVYIKAPH-IMSDQISFDG 592
+AK Q ++ K SDF + ++ +++KL + + + P+ ++ I +
Sbjct: 311 NFLLTKAKPGQWEFTDKTSTNQSDFFRAEEI---IKEKLYSKLRYEIPYSVVQSTIGWTN 367
Query: 593 TRKWIFHVKKNIIET 607
+ + + I T
Sbjct: 368 FKNGDLRIDHDFIVT 382
>TIGR_CMR|APH_0350 [details] [associations]
symbol:APH_0350 "GTP-binding protein Era" species:212042
"Anaplasma phagocytophilum HZ" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0042274
GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 HOGENOM:HOG000245597 RefSeq:YP_504957.1
ProteinModelPortal:Q2GKZ4 STRING:Q2GKZ4 GeneID:3930686
KEGG:aph:APH_0350 PATRIC:20949290
BioCyc:APHA212042:GHPM-379-MONOMER Uniprot:Q2GKZ4
Length = 305
Score = 160 (61.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 47/140 (33%), Positives = 69/140 (49%)
Query: 165 YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ F ++ E N ++ VA+VG N GKSTLIN L+G I + TTR + S+
Sbjct: 2 FSNFGERVEIENTGLMKCSLVAVVGMTNAGKSTLINKLVGFKASIVTNKVHTTRVKMNSV 61
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
N + + DT GI KT +EKF V S+ A++VIL+LDA++ I
Sbjct: 62 LNEGNVQLVFTDTPGIFSP-KT--KLEKFIVKNAWMSMKGADMVILVLDAKRRICVHVEK 118
Query: 285 IANFIYESGRSLIVCVNKWD 304
I + + I +NK D
Sbjct: 119 IIKRLQRDNVASIAVINKMD 138
Score = 41 (19.5 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 1104 LIKKFSNKFVPASGFAIGIERLIELIKK 1131
L+ KF F +S + G+ LI+ +++
Sbjct: 154 LLHKFDRVFTVSSLYGTGVRDLIDYLQE 181
>TIGR_CMR|CPS_5049 [details] [associations]
symbol:CPS_5049 "tRNA modification GTPase TrmE"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HSSP:Q9WYA4 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_271687.1
ProteinModelPortal:Q47U36 SMR:Q47U36 STRING:Q47U36 GeneID:3518638
KEGG:cps:CPS_5049 PATRIC:21472877
BioCyc:CPSY167879:GI48-5049-MONOMER Uniprot:Q47U36
Length = 471
Score = 170 (64.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 40/113 (35%), Positives = 66/113 (58%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E ++V I G+PN GKS+L+N+L G+ I D GTTRD + + +IDTAG+
Sbjct: 222 EGMRVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGL 281
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN--ISAQDINIANFIYE 291
R + +V+EK + + + I +A+ V+L++DA ++ I D +I +F E
Sbjct: 282 RDSD---DVVEKIGIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPE 331
Score = 38 (18.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 864 GQLSGEETDIVKKEMYSFIDELNGDNL 890
G++ EE I ++E+ E D+L
Sbjct: 433 GEILAEELRICQQELDQITGEFTSDDL 459
>UNIPROTKB|F1SKM8 [details] [associations]
symbol:NME6 "Nucleoside diphosphate kinase" species:9823
"Sus scrofa" [GO:0045839 "negative regulation of mitosis"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005739 GO:GO:0005524 GO:GO:0030308 GO:GO:0045839
GO:GO:0006183 GO:GO:0004550 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 GeneTree:ENSGT00700000104244
OMA:FMSSGPM EMBL:FP102065 RefSeq:XP_003132225.1
RefSeq:XP_003132226.1 RefSeq:XP_003132227.1 RefSeq:XP_003132228.1
RefSeq:XP_003132229.1 UniGene:Ssc.1496 Ensembl:ENSSSCT00000012424
GeneID:100520587 KEGG:ssc:100520587 Uniprot:F1SKM8
Length = 186
Score = 137 (53.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 38/117 (32%), Positives = 63/117 (53%)
Query: 425 TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKL--SKNDVEKFYSIHKNRPFFKNL 480
T +LI DA+ ++ E ++ + + K + M++L K D +KFY H+ R F++ L
Sbjct: 14 TLALIKPDAVAHPLILEAIHQ-QILSNKFLIVRMRELLWRKEDCQKFYQEHEGRFFYQRL 72
Query: 481 VNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADFAESIDKNIVH 534
V FM SGP+ +L +DAI+ R ++G T +A A +IR F + +N H
Sbjct: 73 VEFMASGPIRAYILAHKDAIQLWRTVMGPTRVFRARHIAPDSIRGSFGLTDTRNTTH 129
>UNIPROTKB|B3KWE1 [details] [associations]
symbol:HARS "Histidyl-tRNA synthetase, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0004821 "histidine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 EMBL:CH471062
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
EMBL:AC116353 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018075 HOVERGEN:HBG002731 OrthoDB:EOG4D26PM
UniGene:Hs.528050 HGNC:HGNC:4816 ChiTaRS:HARS EMBL:AK124831
IPI:IPI00976939 SMR:B3KWE1 STRING:B3KWE1 Ensembl:ENST00000504366
Uniprot:B3KWE1
Length = 440
Score = 113 (44.8 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYNN---ISYKIN--TKLVRGMDYYNRTVFE- 1083
E L+ PKL K +L+ ++ + Y I KI+ L RG+DYY ++E
Sbjct: 212 EQLLQDPKLSQ--NKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEA 269
Query: 1084 ---WTTDKLGSQ----NSICGGGRYDFLIKKFSNKF--VPASGFAIGIERLIELIKK 1131
T + G + S+ GGRYD L+ F K VP G +IG+ER+ ++++
Sbjct: 270 VLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 326
Score = 96 (38.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 35/106 (33%), Positives = 54/106 (50%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y D+ G+ LSLR + T R + N L KR ++ ++R + P GR
Sbjct: 43 KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKLT--NIKR-YHIAKVYRRDNPAMTRGR 98
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
YR+FYQ + G P I DAE + IMC L +L + + +++N
Sbjct: 99 YREFYQCDFDIAGNFDPMIPDAECLKIMCEIL-SSLQIGDFLVKVN 143
>UNIPROTKB|F1LPB1 [details] [associations]
symbol:Hars "Protein Hars" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004516 PIRSF:PIRSF001549 InterPro:IPR004154 RGD:1310695
GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 GeneTree:ENSGT00390000005922 IPI:IPI00561142
PRIDE:F1LPB1 Ensembl:ENSRNOT00000039291 ArrayExpress:F1LPB1
Uniprot:F1LPB1
Length = 408
Score = 109 (43.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYNN---ISYKIN--TKLVRGMDYYNRTVFEW 1084
E L+ PKL K +++ ++ + Y I KI+ L RG+DYY ++E
Sbjct: 181 EQLLQDPKLSQ--NKQAVEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEA 238
Query: 1085 TTDKLGSQ--------NSICGGGRYDFLIKKFSNKF--VPASGFAIGIERLIELIKK 1131
++ +Q SI GGRYD L+ F K VP G +IG+ER+ ++++
Sbjct: 239 VLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 295
Score = 99 (39.9 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y D+ G+ LSLR + T R + N L KR ++ ++R + P GR
Sbjct: 12 KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKLT--NIKR-YHIAKVYRRDNPAMTRGR 67
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
YR+FYQ + G P I DAE + IMC L +L + N +++N
Sbjct: 68 YREFYQCDFDIAGQFDPMIPDAECLKIMCEIL-SSLQIGNFQVKVN 112
>UNIPROTKB|Q8EH80 [details] [associations]
symbol:era "GTPase Era" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
HSSP:Q9X1F8 SUPFAM:SSF54814 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ HOGENOM:HOG000245597
RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80 GeneID:1169170
KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 156 (60.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 51/193 (26%), Positives = 81/193 (41%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ ++GRPNVGKSTL NRL + ++ + P TR R G G + + IDT G E
Sbjct: 47 MVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGLHIE 106
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQP--IVLVXXXX 121
++ I M + + VDG + D+++ + LR+ G+ VL
Sbjct: 107 EQRAINRLMNRAAASSLADVSMVIFVVDGMTWTAD-DEMVLSKLRRGGEERKTVLAINKV 165
Query: 122 XXXXXXXXLDFYELGIGNPHI------ISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
L Y + + ISA G +K LE + LP FF +++
Sbjct: 166 DNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILE-LAAQSLPENPFFFPEDYV 224
Query: 176 NIHSIEYIKVAIV 188
S ++ IV
Sbjct: 225 TDRSQRFMASEIV 237
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 176 NIH-SIEYI-KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
++H + Y VAI+G+PNVGKSTL+N LLG+ IT P TTR I + ++ +
Sbjct: 37 SVHYDVTYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIV 96
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
IDT G+ + I + S+ + ++VI ++D +A D + + + G
Sbjct: 97 FIDTPGLHIEEQ--RAINRLMNRAAASSLADVSMVIFVVDGM-TWTADDEMVLSKLRRGG 153
Query: 294 --RSLIVCVNKWDS 305
R ++ +NK D+
Sbjct: 154 EERKTVLAINKVDN 167
>TIGR_CMR|SO_1349 [details] [associations]
symbol:SO_1349 "GTP-binding protein Era" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80
GeneID:1169170 KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 156 (60.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 51/193 (26%), Positives = 81/193 (41%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ ++GRPNVGKSTL NRL + ++ + P TR R G G + + IDT G E
Sbjct: 47 MVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGLHIE 106
Query: 64 VKKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQP--IVLVXXXX 121
++ I M + + VDG + D+++ + LR+ G+ VL
Sbjct: 107 EQRAINRLMNRAAASSLADVSMVIFVVDGMTWTAD-DEMVLSKLRRGGEERKTVLAINKV 165
Query: 122 XXXXXXXXLDFYELGIGNPHI------ISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
L Y + + ISA G +K LE + LP FF +++
Sbjct: 166 DNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILE-LAAQSLPENPFFFPEDYV 224
Query: 176 NIHSIEYIKVAIV 188
S ++ IV
Sbjct: 225 TDRSQRFMASEIV 237
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 176 NIH-SIEYI-KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
++H + Y VAI+G+PNVGKSTL+N LLG+ IT P TTR I + ++ +
Sbjct: 37 SVHYDVTYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIV 96
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
IDT G+ + I + S+ + ++VI ++D +A D + + + G
Sbjct: 97 FIDTPGLHIEEQ--RAINRLMNRAAASSLADVSMVIFVVDGM-TWTADDEMVLSKLRRGG 153
Query: 294 --RSLIVCVNKWDS 305
R ++ +NK D+
Sbjct: 154 EERKTVLAINKVDN 167
>UNIPROTKB|F1MCI2 [details] [associations]
symbol:NME6 "Nucleoside diphosphate kinase" species:9913
"Bos taurus" [GO:0045839 "negative regulation of mitosis"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005739 GO:GO:0005524 GO:GO:0030308 GO:GO:0045839
GO:GO:0006183 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 GeneTree:ENSGT00700000104244
OMA:FMSSGPM EMBL:DAAA02054433 IPI:IPI00698824 UniGene:Bt.901
ProteinModelPortal:F1MCI2 Ensembl:ENSBTAT00000003935
NextBio:20868935 Uniprot:F1MCI2
Length = 186
Score = 136 (52.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 38/117 (32%), Positives = 63/117 (53%)
Query: 425 TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKL--SKNDVEKFYSIHKNRPFFKNL 480
T +LI DA+ ++ E ++ + + K + M++L K D +KFY H+ R F++ L
Sbjct: 14 TLALIKPDAVAHPLILEAVHQ-QILSNKFLIVRMRELLWRKEDCQKFYREHEGRFFYQRL 72
Query: 481 VNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADFAESIDKNIVH 534
V FM SGP+ +L +DAI+ R ++G T +A A +IR F + +N H
Sbjct: 73 VEFMASGPIRAYILAHKDAIQLWRTVMGPTRVFRARHVAPDSIRGSFGLTDTRNTTH 129
>UNIPROTKB|J9NSB4 [details] [associations]
symbol:NME6 "Nucleoside diphosphate kinase" species:9615
"Canis lupus familiaris" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006183 "GTP
biosynthetic process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 GO:GO:0006183
GO:GO:0004550 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 GeneTree:ENSGT00700000104244
CTD:10201 OMA:FMSSGPM EMBL:AAEX03012236 RefSeq:XP_533843.3
ProteinModelPortal:J9NSB4 Ensembl:ENSCAFT00000048064 GeneID:476638
KEGG:cfa:476638 Uniprot:J9NSB4
Length = 186
Score = 136 (52.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 38/117 (32%), Positives = 63/117 (53%)
Query: 425 TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKL--SKNDVEKFYSIHKNRPFFKNL 480
T +LI DA+ ++ E ++ + + K + MK+L K + +KFY H+ R F++ L
Sbjct: 14 TLALIKPDAVAHPLILEAVHQ-QILSNKFLIVRMKELLWRKEECQKFYQEHEGRFFYQRL 72
Query: 481 VNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADFAESIDKNIVH 534
V +M SGP+ +L +DAI+ R L+G T +A A +IR F + +N H
Sbjct: 73 VEYMASGPIRAYILARKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTH 129
>UNIPROTKB|C9J9V6 [details] [associations]
symbol:NME6 "Nucleoside diphosphate kinase" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005739 GO:GO:0005524 GO:GO:0006183 HOGENOM:HOG000224565
EMBL:AC105267 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 HGNC:HGNC:20567 IPI:IPI00924527
ProteinModelPortal:C9J9V6 SMR:C9J9V6 STRING:C9J9V6
Ensembl:ENST00000425930 ArrayExpress:C9J9V6 Bgee:C9J9V6
Uniprot:C9J9V6
Length = 174
Score = 136 (52.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 38/117 (32%), Positives = 63/117 (53%)
Query: 425 TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKL--SKNDVEKFYSIHKNRPFFKNL 480
T +LI DA+ ++ E ++ + + K + M++L K D ++FY H+ R F++ L
Sbjct: 14 TLALIKPDAVAHPLILEAVHQ-QILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFYQRL 72
Query: 481 VNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADFAESIDKNIVH 534
V FM SGP+ +L +DAI+ R L+G T +A A +IR F + +N H
Sbjct: 73 VEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTH 129
>UNIPROTKB|O75414 [details] [associations]
symbol:NME6 "Nucleoside diphosphate kinase 6" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IDA] [GO:0005524 "ATP binding" evidence=NAS] [GO:0009142
"nucleoside triphosphate biosynthetic process" evidence=NAS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=NAS] [GO:0045839 "negative regulation of mitosis"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
EMBL:AF051941 GO:GO:0005739 GO:GO:0005524 GO:GO:0006915
GO:GO:0043066 GO:GO:0030308 GO:GO:0046872 GO:GO:0045839
GO:GO:0006183 HOGENOM:HOG000224565 EMBL:AC105267 GO:GO:0004550
eggNOG:COG0105 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 EMBL:U90449 EMBL:AK294809
EMBL:AK297364 EMBL:AK222555 EMBL:BC001808 EMBL:BC012828
IPI:IPI00218214 IPI:IPI00910570 IPI:IPI00910598 RefSeq:NP_005784.1
UniGene:Hs.465558 ProteinModelPortal:O75414 SMR:O75414
IntAct:O75414 STRING:O75414 PaxDb:O75414 PRIDE:O75414 DNASU:10201
Ensembl:ENST00000415053 Ensembl:ENST00000415644
Ensembl:ENST00000421967 Ensembl:ENST00000426689
Ensembl:ENST00000426723 Ensembl:ENST00000435684
Ensembl:ENST00000442597 Ensembl:ENST00000450160
Ensembl:ENST00000451657 Ensembl:ENST00000452211 GeneID:10201
KEGG:hsa:10201 UCSC:uc003cso.3 UCSC:uc011bbh.2 UCSC:uc011bbi.2
CTD:10201 GeneCards:GC03M048334 H-InvDB:HIX0019874 HGNC:HGNC:20567
HPA:HPA017909 MIM:608294 neXtProt:NX_O75414 PharmGKB:PA134873104
HOVERGEN:HBG001619 InParanoid:O75414 OrthoDB:EOG4SQWXQ
ChEMBL:CHEMBL4480 GenomeRNAi:10201 NextBio:38610
ArrayExpress:O75414 Bgee:O75414 CleanEx:HS_NME6
Genevestigator:O75414 GermOnline:ENSG00000172113 GO:GO:0009142
Uniprot:O75414
Length = 186
Score = 136 (52.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 38/117 (32%), Positives = 63/117 (53%)
Query: 425 TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKL--SKNDVEKFYSIHKNRPFFKNL 480
T +LI DA+ ++ E ++ + + K + M++L K D ++FY H+ R F++ L
Sbjct: 14 TLALIKPDAVAHPLILEAVHQ-QILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFYQRL 72
Query: 481 VNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADFAESIDKNIVH 534
V FM SGP+ +L +DAI+ R L+G T +A A +IR F + +N H
Sbjct: 73 VEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTH 129
>MGI|MGI:108087 [details] [associations]
symbol:Hars "histidyl-tRNA synthetase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0004821 "histidine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006418
"tRNA aminoacylation for protein translation" evidence=IEA]
[GO:0006427 "histidyl-tRNA aminoacylation" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] InterPro:IPR000738
InterPro:IPR004516 InterPro:IPR006195 InterPro:IPR015807
Pfam:PF00458 PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862
PROSITE:PS51185 SMART:SM00991 InterPro:IPR004154 MGI:MGI:108087
GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 CTD:3035
GeneTree:ENSGT00390000005922 HOGENOM:HOG000018075
HOVERGEN:HBG002731 OMA:RGERAQK OrthoDB:EOG4D26PM BRENDA:6.1.1.21
ChiTaRS:HARS EMBL:U39473 EMBL:AK146922 EMBL:AK166826 EMBL:AK166892
IPI:IPI00116991 PIR:JC5223 RefSeq:NP_032240.3 UniGene:Mm.10528
ProteinModelPortal:Q61035 SMR:Q61035 STRING:Q61035
PhosphoSite:Q61035 PaxDb:Q61035 PRIDE:Q61035
Ensembl:ENSMUST00000001416 GeneID:15115 KEGG:mmu:15115
InParanoid:Q3TKU3 NextBio:287526 Bgee:Q61035 CleanEx:MM_HARS
Genevestigator:Q61035 GermOnline:ENSMUSG00000001380 Uniprot:Q61035
Length = 509
Score = 109 (43.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYN---NISYKIN--TKLVRGMDYYNRTVFEW 1084
E L+ PKL K +++ ++ + Y I KI+ L RG+DYY ++E
Sbjct: 281 EQLLQDPKLSQ--NKQAVEGLGDLKLLFEYLILFGIDDKISFDLSLARGLDYYTGVIYEA 338
Query: 1085 TTDKLGSQ--------NSICGGGRYDFLIKKFSNKF--VPASGFAIGIERLIELIKK 1131
++ +Q SI GGRYD L+ F K VP G +IG+ER+ ++++
Sbjct: 339 VLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 395
Score = 101 (40.6 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y D+ G+ LSLR + T R + N L KR ++ ++R + P GR
Sbjct: 112 KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKLT--NIKR-YHIAKVYRRDNPAMTRGR 167
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
YR+FYQ + G P I DAE + IMC L +L + N +++N
Sbjct: 168 YREFYQCDFDIAGQFDPMIPDAECLKIMCEIL-SSLQIGNFLVKVN 212
>UNIPROTKB|P37214 [details] [associations]
symbol:era "GTPase Era" species:210007 "Streptococcus
mutans UA159" [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0042254 GO:GO:0019843 GO:GO:0019003
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:L03428 EMBL:AE014133 RefSeq:NP_721952.1
ProteinModelPortal:P37214 EnsemblBacteria:EBSTRT00000013881
GeneID:1028847 GenomeReviews:AE014133_GR KEGG:smu:SMU_1617
PATRIC:19665223 SABIO-RK:P37214 Uniprot:P37214
Length = 299
Score = 154 (59.3 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 46/182 (25%), Positives = 85/182 (46%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VAI+G+PNVGKST +N ++G+ I D TTR+ I ++ + ++ + IDT GI +
Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKP- 66
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
KT + F V ++ E + V+ ++ A + D I + + +I+ +NK D
Sbjct: 67 KT--ALGDFMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERLKAAKVPVILVINKID 124
Query: 305 SXXXXXXXXXXXXXXXXXXFLSFAMFNFISAIKLNNINSFMES-INHVYDSSIIHLSTSR 363
F ISA++ NN++ ++ ++H+ + + +
Sbjct: 125 KVHPNQLLEQIDDFRNQMDFQEIVP---ISALQGNNVSHLVDLLVDHL-EEGFQYFPADQ 180
Query: 364 IT 365
IT
Sbjct: 181 IT 182
>UNIPROTKB|P12081 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] [GO:0004821 "histidine-tRNA ligase
activity" evidence=NAS] [GO:0006412 "translation" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0005524 "ATP binding"
evidence=NAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000738 InterPro:IPR002314 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458 Pfam:PF00587
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862 PROSITE:PS51185
SMART:SM00991 InterPro:IPR004154 GO:GO:0005829 GO:GO:0005524
GO:GO:0005737 GO:GO:0006418 GO:GO:0004812 SUPFAM:SSF52954
Orphanet:231183 DrugBank:DB00117 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 EMBL:AC116353
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 CTD:3035 HOGENOM:HOG000018075
HOVERGEN:HBG002731 OMA:RGERAQK EMBL:Z11518 EMBL:X05345
EMBL:AK302295 EMBL:BC011807 EMBL:BC080514 EMBL:M96646 EMBL:U18936
IPI:IPI00021808 PIR:I37559 RefSeq:NP_001244969.1 RefSeq:NP_002100.2
UniGene:Hs.528050 PDB:1X59 PDB:4G84 PDB:4G85 PDBsum:1X59
PDBsum:4G84 PDBsum:4G85 ProteinModelPortal:P12081 SMR:P12081
DIP:DIP-37596N IntAct:P12081 STRING:P12081 PhosphoSite:P12081
DMDM:135123 PaxDb:P12081 PeptideAtlas:P12081 PRIDE:P12081
Ensembl:ENST00000438307 Ensembl:ENST00000504156 GeneID:3035
KEGG:hsa:3035 UCSC:uc003lgu.3 GeneCards:GC05M140034 HGNC:HGNC:4816
HPA:HPA036539 MIM:142810 MIM:614504 neXtProt:NX_P12081
PharmGKB:PA29191 InParanoid:P12081 PhylomeDB:P12081 BRENDA:6.1.1.21
BindingDB:P12081 ChEMBL:CHEMBL4002 ChiTaRS:HARS
EvolutionaryTrace:P12081 GenomeRNAi:3035 NextBio:12014
ArrayExpress:P12081 Bgee:P12081 CleanEx:HS_HARS
Genevestigator:P12081 GermOnline:ENSG00000170445 Uniprot:P12081
Length = 509
Score = 113 (44.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYNN---ISYKIN--TKLVRGMDYYNRTVFE- 1083
E L+ PKL K +L+ ++ + Y I KI+ L RG+DYY ++E
Sbjct: 281 EQLLQDPKLSQ--NKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEA 338
Query: 1084 ---WTTDKLGSQ----NSICGGGRYDFLIKKFSNKF--VPASGFAIGIERLIELIKK 1131
T + G + S+ GGRYD L+ F K VP G +IG+ER+ ++++
Sbjct: 339 VLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 395
Score = 96 (38.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 35/106 (33%), Positives = 54/106 (50%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y D+ G+ LSLR + T R + N L KR ++ ++R + P GR
Sbjct: 112 KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKLT--NIKR-YHIAKVYRRDNPAMTRGR 167
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
YR+FYQ + G P I DAE + IMC L +L + + +++N
Sbjct: 168 YREFYQCDFDIAGNFDPMIPDAECLKIMCEIL-SSLQIGDFLVKVN 212
>UNIPROTKB|Q9KVY5 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/105 (34%), Positives = 59/105 (56%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KV I G+PN GKS+L+N+L G+ I D GTTRD ++ + +IDTAG+
Sbjct: 214 EGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL 273
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ--QNISAQDI 283
R + + +EK + + + I +A+ V+ ++D + QDI
Sbjct: 274 RDAS---DAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDI 315
>TIGR_CMR|VC_0003 [details] [associations]
symbol:VC_0003 "thiophene and furan oxidation protein ThdF"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/105 (34%), Positives = 59/105 (56%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KV I G+PN GKS+L+N+L G+ I D GTTRD ++ + +IDTAG+
Sbjct: 214 EGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL 273
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ--QNISAQDI 283
R + + +EK + + + I +A+ V+ ++D + QDI
Sbjct: 274 RDAS---DAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDI 315
>RGD|1310695 [details] [associations]
symbol:Hars "histidyl-tRNA synthetase" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000738 InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 Pfam:PF00458 PIRSF:PIRSF001549 PROSITE:PS00762
PROSITE:PS50862 PROSITE:PS51185 SMART:SM00991 InterPro:IPR004154
HAMAP:MF_00127 RGD:1310695 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 EMBL:CH473974
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 CTD:3035 HOGENOM:HOG000018075 HOVERGEN:HBG002731
OrthoDB:EOG4D26PM IPI:IPI00561142 EMBL:BC097969
RefSeq:NP_001020585.1 UniGene:Rn.35537 SMR:Q4QQV4 STRING:Q4QQV4
GeneID:307492 KEGG:rno:307492 NextBio:657484 Genevestigator:Q4QQV4
Uniprot:Q4QQV4
Length = 508
Score = 109 (43.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYNN---ISYKIN--TKLVRGMDYYNRTVFEW 1084
E L+ PKL K +++ ++ + Y I KI+ L RG+DYY ++E
Sbjct: 281 EQLLQDPKLSQ--NKQAVEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEA 338
Query: 1085 TTDKLGSQ--------NSICGGGRYDFLIKKFSNKF--VPASGFAIGIERLIELIKK 1131
++ +Q SI GGRYD L+ F K VP G +IG+ER+ ++++
Sbjct: 339 VLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 395
Score = 99 (39.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y D+ G+ LSLR + T R + N L KR ++ ++R + P GR
Sbjct: 112 KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKLT--NIKR-YHIAKVYRRDNPAMTRGR 167
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
YR+FYQ + G P I DAE + IMC L +L + N +++N
Sbjct: 168 YREFYQCDFDIAGQFDPMIPDAECLKIMCEIL-SSLQIGNFQVKVN 212
>GENEDB_PFALCIPARUM|PFI1645c [details] [associations]
symbol:PFI1645c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR004516 InterPro:IPR004154
GO:GO:0005737 GO:GO:0004812 SUPFAM:SSF52954 EMBL:AL844508
PANTHER:PTHR11476 KO:K01892 RefSeq:XP_001352205.1
ProteinModelPortal:Q8I2H8 EnsemblProtists:PFI1645c:mRNA
GeneID:813609 KEGG:pfa:PFI1645c EuPathDB:PlasmoDB:PF3D7_0934000
HOGENOM:HOG000284651 ProtClustDB:CLSZ2500618 Uniprot:Q8I2H8
Length = 642
Score = 147 (56.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 1007 EDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNY------N 1060
E+I++ LY N L+ + N + + + + + Y D+ HF + + Y N
Sbjct: 390 ENIRY-LY-NILQNIKHINHLEKFVKCHNTNIY-YKNIDTSTHFNNFKNVFTYFQQANLN 446
Query: 1061 NISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAI 1120
N +K++ +VRGMDYYN VFE K S +ICGGGRY+F + +NK + A G A+
Sbjct: 447 NF-FKLDLTIVRGMDYYNNMVFEIYYKKDKSHRAICGGGRYNFFLN--NNK-IYAVGCAM 502
Query: 1121 GIERLIELIKKININHN 1137
G + +L+ N +N
Sbjct: 503 GDVVITDLLFNNNKKNN 519
Score = 62 (26.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 869 EETDIVKK----EMYSFIDELNGDNLSLRPEGTASVIRSV-IENNLIYD 912
E D+ +K E Y FI N +L LRPE T +IR + I +NL+ D
Sbjct: 100 ESYDLFRKSPINESYDFIK--NNKHLILRPEITPQLIRYLYINDNLLQD 146
>UNIPROTKB|Q8I2H8 [details] [associations]
symbol:PFI1645c "Histidyl-tRNA synthetase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR004516 InterPro:IPR004154 GO:GO:0005737
GO:GO:0004812 SUPFAM:SSF52954 EMBL:AL844508 PANTHER:PTHR11476
KO:K01892 RefSeq:XP_001352205.1 ProteinModelPortal:Q8I2H8
EnsemblProtists:PFI1645c:mRNA GeneID:813609 KEGG:pfa:PFI1645c
EuPathDB:PlasmoDB:PF3D7_0934000 HOGENOM:HOG000284651
ProtClustDB:CLSZ2500618 Uniprot:Q8I2H8
Length = 642
Score = 147 (56.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 1007 EDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNY------N 1060
E+I++ LY N L+ + N + + + + + Y D+ HF + + Y N
Sbjct: 390 ENIRY-LY-NILQNIKHINHLEKFVKCHNTNIY-YKNIDTSTHFNNFKNVFTYFQQANLN 446
Query: 1061 NISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAI 1120
N +K++ +VRGMDYYN VFE K S +ICGGGRY+F + +NK + A G A+
Sbjct: 447 NF-FKLDLTIVRGMDYYNNMVFEIYYKKDKSHRAICGGGRYNFFLN--NNK-IYAVGCAM 502
Query: 1121 GIERLIELIKKININHN 1137
G + +L+ N +N
Sbjct: 503 GDVVITDLLFNNNKKNN 519
Score = 62 (26.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 869 EETDIVKK----EMYSFIDELNGDNLSLRPEGTASVIRSV-IENNLIYD 912
E D+ +K E Y FI N +L LRPE T +IR + I +NL+ D
Sbjct: 100 ESYDLFRKSPINESYDFIK--NNKHLILRPEITPQLIRYLYINDNLLQD 146
>UNIPROTKB|E1C3P8 [details] [associations]
symbol:NME7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] [GO:0003351 "epithelial cilium movement"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0042073 "intraflagellar
transport" evidence=IEA] [GO:0060830 "ciliary receptor clustering
involved in smoothened signaling pathway" evidence=IEA] [GO:0060972
"left/right pattern formation" evidence=IEA] InterPro:IPR001564
InterPro:IPR011410 Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 GO:GO:0005813 InterPro:IPR006602
SMART:SM00676 PROSITE:PS51336 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 GeneTree:ENSGT00700000104331 OMA:MEIQQNN
EMBL:AADN02032820 IPI:IPI00581122 Ensembl:ENSGALT00000024577
Uniprot:E1C3P8
Length = 376
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 56/193 (29%), Positives = 87/193 (45%)
Query: 372 IKNHPPCRKKLIRPKLRYAHQG----GKNPPIIVIHGNRLKYIGNDYK-RYLEKYFYRTF 426
+KNH R L R K H G + H + + Y G+ Y R L RT
Sbjct: 40 VKNH---RTFLKRTKYESLHLEDLFVGNKITVFSRHLSLVDY-GDQYTARKLGSRKERTL 95
Query: 427 SLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFM 484
+LI DA K +GE+ + G I A M LS+ + FY H+++PF+ L+ F+
Sbjct: 96 ALIKPDATPK--IGELVDIIINAGFTITKAKMMVLSRKEAVDFYVDHQSKPFYNELLQFI 153
Query: 485 ISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKG---TIRADFAESIDKNIVHELGEMPF 541
SGPV + +DA+ K + L+G + A +IRA+F +N H +
Sbjct: 154 TSGPVVAMEILRDDAVCKWKTLLGPANSAVARTDEPDSIRANFGHDGIRNAAHGPDSVAS 213
Query: 542 RAKQLQKWIHKFG 554
A++L+ + G
Sbjct: 214 AARELELFFPSSG 226
>UNIPROTKB|F1RPV8 [details] [associations]
symbol:NME7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060972 "left/right pattern formation" evidence=IEA]
[GO:0060830 "ciliary receptor clustering involved in smoothened
signaling pathway" evidence=IEA] [GO:0042073 "intraflagellar
transport" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0003351
"epithelial cilium movement" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0006228 "UTP biosynthetic
process" evidence=IEA] [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0005813 GO:GO:0060972 InterPro:IPR006602
SMART:SM00676 PROSITE:PS51336 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 GeneTree:ENSGT00700000104331 EMBL:CU468987
EMBL:CU856048 EMBL:FP340451 Ensembl:ENSSSCT00000006898 OMA:GHANTAD
Uniprot:F1RPV8
Length = 263
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 45/151 (29%), Positives = 72/151 (47%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G + M LS+ + F
Sbjct: 79 GDQYTARQLGSKKEKTLALIKPDAVSK--AGEIIEIINKAGFTLTKLKMMTLSRKEATDF 136
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADF 524
+ H++RPF L+ F+ SGP+ + +DAI + + L+G + A A G+IRA F
Sbjct: 137 HIDHQSRPFLNELIQFITSGPIIAMEILRDDAICEWKKLLGPANSGLARTDAPGSIRAVF 196
Query: 525 AESIDKNIVHELGEMPFRAKQLQKWIHKFGV 555
+N H + A++++ + GV
Sbjct: 197 GTDGIRNAAHGPDSLSCAAREMELFFPSSGV 227
>FB|FBgn0039189 [details] [associations]
symbol:CG18528 species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0046872 GO:GO:0003924
GO:GO:0005622 GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 GeneTree:ENSGT00390000016851 EMBL:AY071544
EMBL:AY071692 RefSeq:NP_651251.3 UniGene:Dm.5798 SMR:Q9VC87
IntAct:Q9VC87 MINT:MINT-821147 STRING:Q9VC87
EnsemblMetazoa:FBtr0084628 GeneID:42906 KEGG:dme:Dmel_CG18528
UCSC:CG18528-RA FlyBase:FBgn0039189 InParanoid:Q9VC87 OMA:LTQTRHR
OrthoDB:EOG4HQC0H GenomeRNAi:42906 NextBio:831200 Uniprot:Q9VC87
Length = 493
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/109 (33%), Positives = 65/109 (59%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++ I+G PNVGKS+L+N L + I D GTTRD I+++ + + DTAG+RR
Sbjct: 240 VRTVIIGAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDIIETMHNFGGYPVVFSDTAGLRR 299
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS--AQDINIANFI 289
T + IE+ + + ++++++++LL +A+ NI+ D +A F+
Sbjct: 300 Y--TTDSIEQEGMQRAKNCLVQSDLILLLAEAK-NIAQLTHDDAVAPFV 345
>CGD|CAL0004839 [details] [associations]
symbol:HTS1 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] InterPro:IPR004516
InterPro:IPR015807 PIRSF:PIRSF001549 InterPro:IPR004154
CGD:CAL0004839 HAMAP:MF_00127 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF52954 EMBL:AACQ01000012 Gene3D:3.40.50.800 Pfam:PF03129
EMBL:AACQ01000011 PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442 RefSeq:XP_721959.1
RefSeq:XP_722119.1 ProteinModelPortal:Q5AJX0 STRING:Q5AJX0
GeneID:3636293 GeneID:3636532 KEGG:cal:CaO19.11533
KEGG:cal:CaO19.4051 Uniprot:Q5AJX0
Length = 501
Score = 119 (46.9 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 1094 SICGGGRYDFLIKKFSN-KFVPASGFAIGIERLIELIK-KININHNFSHQCDIYIVHVG 1150
SI GGRYD L+ FSN K +P G + G+ERL +IK + N+N+ ++ D++++ G
Sbjct: 336 SIAAGGRYDNLVGMFSNGKSIPCVGVSFGVERLFSIIKNRANLNNISANHTDVFVMAFG 394
Score = 81 (33.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 30/106 (28%), Positives = 55/106 (51%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y+ D+ G+ SLR + T R V NN+ KR ++ ++R ++P GR
Sbjct: 78 KLIYNLEDQ-GGELTSLRYDLTVPFARFVACNNIA--SIKR-YHIAKVYRRDQPAMTKGR 133
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
R+FYQ + G + D+E++ ++C L L +++ ++LN
Sbjct: 134 MREFYQCDFDIAGNYDTMVPDSEILALLCDGL-NGLGIQDFKVKLN 178
Score = 49 (22.3 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 1014 YLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRG 1073
YL S +L S + + I L DY+ D+ D I Y +S+ ++ L RG
Sbjct: 249 YLQSSEILKSNDSAQKGIE-EMQILADYV--DAFD-------ITQY--LSFDLS--LARG 294
Query: 1074 MDYYNRTVFEWTT 1086
+DYY ++E T
Sbjct: 295 LDYYTGLIYEAVT 307
>TIGR_CMR|APH_1288 [details] [associations]
symbol:APH_1288 "tRNA modification GTPase TrmE"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ RefSeq:YP_505803.1 ProteinModelPortal:Q2GIJ8
STRING:Q2GIJ8 GeneID:3930863 KEGG:aph:APH_1288 PATRIC:20951370
ProtClustDB:PRK05291 BioCyc:APHA212042:GHPM-1290-MONOMER
Uniprot:Q2GIJ8
Length = 445
Score = 154 (59.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++V I+G PN GKSTL NS+ N I + PGTTRD ++ + YI++DTAGIR
Sbjct: 218 VRVVILGPPNAGKSTLFNSIARRNAAIVSEHPGTTRDVLEVAIDIGGYPYIVLDTAGIR- 276
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
++ + IE+ + + + EA++ I++ + S Q I+
Sbjct: 277 --ESCDGIEQEGIKRAKMAAEEADIKIVMYP-YETTSMQGID 315
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+V++G PN GKSTLFN + A+V+ +PG TRD IG +I++DT G E
Sbjct: 220 VVILGPPNAGKSTLFNSIARRNAAIVSEHPGTTRDVLEVAIDIGGYPYIVLDTAGIR-ES 278
Query: 65 KKGIMHEMTKQTKQA 79
GI E K+ K A
Sbjct: 279 CDGIEQEGIKRAKMA 293
>UNIPROTKB|F1ND13 [details] [associations]
symbol:HARS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004821 "histidine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006427 "histidyl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR000738 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS50862 PROSITE:PS51185 SMART:SM00991
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 GeneTree:ENSGT00390000005922
EMBL:AADN02063754 EMBL:AADN02063755 IPI:IPI00594137
Ensembl:ENSGALT00000001152 OMA:ALDIARC ArrayExpress:F1ND13
Uniprot:F1ND13
Length = 504
Score = 111 (44.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 1030 EILINAPKLL-DYLEKDSLDHFYGIQKILNYNNISYKIN--TKLVRGMDYYNRTVFEWTT 1086
E L+ PKL + L K+ L + + L I+ KI+ L RG+DYY ++E
Sbjct: 279 EQLLQDPKLSQNKLVKEGLGDMKLLFEYLTLFGITGKISFDLSLARGLDYYTGVIYEAVL 338
Query: 1087 --------DKLGSQNSICGGGRYDFLIKKFSNKF--VPASGFAIGI-ERLIELIKK 1131
++ S S+ GGGRYD L+ F K VP G +IGI ER+ ++++
Sbjct: 339 LQQENDHGEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGISIGIIERIFSILEQ 394
Score = 93 (37.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y D+ G+ LSLR + T R + N + KR ++ ++R + P GR
Sbjct: 110 KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKIT--NIKR-YHIAKVYRRDNPAMTRGR 165
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELIIMCSRLWKNLNLKNICLELN 977
YR+FYQ + G P I DAE + + + +L L + +++N
Sbjct: 166 YREFYQCDFDIAGQFDPMIPDAECLKIVQEILSDLQLGDFLIKVN 210
>UNIPROTKB|F1RGD8 [details] [associations]
symbol:HARS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
OMA:NKIKRAC GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 EMBL:CU459055 RefSeq:XP_003124096.1
Ensembl:ENSSSCT00000015706 GeneID:100521256 KEGG:ssc:100521256
Uniprot:F1RGD8
Length = 506
Score = 109 (43.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 34/117 (29%), Positives = 59/117 (50%)
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYNN---ISYKIN--TKLVRGMDYYNRTVFE- 1083
E ++ P+L K +L+ ++ + +Y I+ KI+ L RG+DYY ++E
Sbjct: 282 EDMLQDPELSR--NKQALEGLGDLKLLFDYLTLFGIAEKISFDLSLARGLDYYTGVIYEA 339
Query: 1084 ---WTTDKLGSQ----NSICGGGRYDFLIKKFSNK--FVPASGFAIGIERLIELIKK 1131
T + G + S+ GGRYD L+ F K VP G +IG+ER+ ++++
Sbjct: 340 VLLQTPAQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHTVPCVGLSIGVERIFSIVEQ 396
Score = 94 (38.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE++ ++ Y D+ G+ LSLR + T R + N + KR ++ G ++R E
Sbjct: 109 GEDSGLI----YDLKDQ-GGELLSLRYDLTVPFARYLAMNKV--KKMKR-YHVGKVWRRE 160
Query: 928 RPQY--GRYRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
P GRYR+F Q + G P I DAE + IMC L L L + +++N
Sbjct: 161 SPTIVQGRYREFCQCDFDIAGHFDPMIPDAECVKIMCEIL-SGLQLGDFLIKVN 213
>UNIPROTKB|Q2KI84 [details] [associations]
symbol:HARS "Histidine--tRNA ligase, cytoplasmic"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004821 "histidine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR000738 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862 PROSITE:PS51185
SMART:SM00991 InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
EMBL:BC112731 IPI:IPI00686511 RefSeq:NP_001039531.1
UniGene:Bt.49179 ProteinModelPortal:Q2KI84 SMR:Q2KI84 STRING:Q2KI84
PRIDE:Q2KI84 Ensembl:ENSBTAT00000025094 GeneID:510937
KEGG:bta:510937 CTD:3035 GeneTree:ENSGT00390000005922
HOGENOM:HOG000018075 HOVERGEN:HBG002731 InParanoid:Q2KI84
OMA:RGERAQK OrthoDB:EOG4D26PM NextBio:20869692 ArrayExpress:Q2KI84
Uniprot:Q2KI84
Length = 509
Score = 109 (43.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYNN---ISYKIN--TKLVRGMDYYNRTVFEW 1084
E L+ PKL K +L+ ++ + Y I+ KI+ L RG+DYY ++E
Sbjct: 281 EQLLQDPKLSQ--NKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEA 338
Query: 1085 TT----DKLGSQ----NSICGGGRYDFLIKKFSNKF--VPASGFAIGIERLIELIKK 1131
+ G + S+ GGRYD L+ F K VP G +IG+ER+ ++++
Sbjct: 339 VLLQPPARAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 395
Score = 94 (38.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y D+ G+ LSLR + T R + N L KR ++ ++R + P GR
Sbjct: 112 KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKLT--NIKR-YHIAKVYRRDNPAMTRGR 167
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
YR+FYQ + G P + DAE + IMC L +L + + +++N
Sbjct: 168 YREFYQCDFDIAGQFDPMLPDAECLKIMCEIL-SSLQIGDFLVKVN 212
>UNIPROTKB|F1P745 [details] [associations]
symbol:NME7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004550 "nucleoside diphosphate
kinase activity" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 InterPro:IPR006602
SMART:SM00676 PROSITE:PS51336 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 GeneTree:ENSGT00700000104331 EMBL:AAEX03005219
Ensembl:ENSCAFT00000038019 Uniprot:F1P745
Length = 260
Score = 146 (56.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 45/151 (29%), Positives = 70/151 (46%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M LS+ + F
Sbjct: 79 GDQYTARQLGSRKEKTLALIKPDAVSK--AGEIIEMINKAGFTITKLKMMMLSRKEATDF 136
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADF 524
+ H++RPF L+ F+ SGP + +DAI + + L+G + A A G++RA F
Sbjct: 137 HIDHQSRPFLNELIQFITSGPTIAMEILRDDAICEWKRLLGPANSGMARTDAPGSLRALF 196
Query: 525 AESIDKNIVHELGEMPFRAKQLQKWIHKFGV 555
+N H A++++ + GV
Sbjct: 197 GTDGIRNAAHGPDSFASAAREMELFFPSSGV 227
>UNIPROTKB|F1RGD9 [details] [associations]
symbol:HARS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006427 "histidyl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] InterPro:IPR000738 InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 Pfam:PF00458
PIRSF:PIRSF001549 PROSITE:PS00762 PROSITE:PS50862 PROSITE:PS51185
SMART:SM00991 InterPro:IPR004154 HAMAP:MF_00127 GO:GO:0005524
GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 KO:K01892 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 OMA:RGERAQK EMBL:CU459055
RefSeq:XP_003124081.1 Ensembl:ENSSSCT00000015705 GeneID:100518652
KEGG:ssc:100518652 Uniprot:F1RGD9
Length = 509
Score = 107 (42.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 1030 EILINAPKLLDYLEKDSLDHFYGIQKILNYNN---ISYKIN--TKLVRGMDYYNRTVFEW 1084
E L+ PKL K +L+ ++ + Y ++ KI+ L RG+DYY ++E
Sbjct: 281 EQLLQDPKLSQ--NKQALEGLGDLKLLFEYLTLFGVADKISFDLSLARGLDYYTGVIYEA 338
Query: 1085 TT----DKLGSQ----NSICGGGRYDFLIKKFSNKF--VPASGFAIGIERLIELIKK 1131
+ G + S+ GGRYD L+ F K VP G +IG+ER+ ++++
Sbjct: 339 VLLQPPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 395
Score = 96 (38.9 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 35/106 (33%), Positives = 54/106 (50%)
Query: 876 KEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GR 933
K +Y D+ G+ LSLR + T R + N L KR ++ ++R + P GR
Sbjct: 112 KLIYDLKDQ-GGELLSLRYDLTVPFARYLAMNKLT--NIKR-YHIAKVYRRDNPAMTRGR 167
Query: 934 YRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
YR+FYQ + G P I DAE + IMC L +L + + +++N
Sbjct: 168 YREFYQCDFDIAGQFDPMIPDAECLKIMCEIL-SSLQIGDFLVKVN 212
>UNIPROTKB|F1LVA7 [details] [associations]
symbol:Nme7 "Nucleoside diphosphate kinase 7" species:10116
"Rattus norvegicus" [GO:0004550 "nucleoside diphosphate kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 RGD:619880 GO:GO:0005524
InterPro:IPR006602 SMART:SM00676 PROSITE:PS51336 GO:GO:0006183
GO:GO:0004550 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
PANTHER:PTHR11349 SUPFAM:SSF54919 IPI:IPI00782537
Ensembl:ENSRNOT00000058892 ArrayExpress:F1LVA7 Uniprot:F1LVA7
Length = 258
Score = 145 (56.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M LS+ + F
Sbjct: 79 GDQYTARQLGSRKEKTLALIKPDAVSK--AGEIIEMINKSGFTITKLRMMTLSRKEAADF 136
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADF 524
+ H +RPF+ L+ F+ SGPV + +DAI + + L+G + A A G++RA F
Sbjct: 137 HVDHHSRPFYNELIQFITSGPVIAMEILRDDAICEWKRLLGPANSGIARSEAPGSVRALF 196
Query: 525 AESIDKNIVHELGEMPFRAKQLQKWIHKFG 554
+N H A++++ + G
Sbjct: 197 GTDGIRNAAHGSDTFESAAREMELFFPSSG 226
>UNIPROTKB|H3BPR2 [details] [associations]
symbol:NME3 "Nucleoside diphosphate kinase" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 GO:GO:0005739
GO:GO:0005524 EMBL:AC012180 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 InterPro:IPR023005
PANTHER:PTHR11349 SUPFAM:SSF54919 PROSITE:PS00469 HGNC:HGNC:7851
ProteinModelPortal:H3BPR2 SMR:H3BPR2 Ensembl:ENST00000563498
Bgee:H3BPR2 Uniprot:H3BPR2
Length = 85
Score = 128 (50.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 484 MISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELGEMPFRA 543
M SGPV V +G D ++ R LIG T+P A GTIR DF + KN++H +
Sbjct: 1 MASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVESAR 60
Query: 544 KQLQKW 549
+++ W
Sbjct: 61 REIALW 66
>UNIPROTKB|Q5SM23 [details] [associations]
symbol:era "GTPase Era" species:300852 "Thermus
thermophilus HB8" [GO:0000028 "ribosomal small subunit assembly"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0000028 EMBL:AP008226 GenomeReviews:AP008226_GR GO:GO:0070181
GO:GO:0043024 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_143386.1 PDB:1WF3
PDB:1X18 PDB:1X1L PDBsum:1WF3 PDBsum:1X18 PDBsum:1X1L
ProteinModelPortal:Q5SM23 SMR:Q5SM23 STRING:Q5SM23 GeneID:3167951
KEGG:ttj:TTHA0120 PATRIC:23955177 EvolutionaryTrace:Q5SM23
Uniprot:Q5SM23
Length = 301
Score = 151 (58.2 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 38/123 (30%), Positives = 68/123 (55%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
VAIVGKPNVGKSTL+N+LLG P TTR ++ + ++ + +DT G+ +
Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGL---H 66
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES-GRSLIVCV-NK 302
K + + +F + +++ + N V+ ++D + + +D +A + G+ I+ V NK
Sbjct: 67 KPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNK 126
Query: 303 WDS 305
D+
Sbjct: 127 LDA 129
Score = 128 (50.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VG+PNVGKSTL N L + A ++ P TR R G G++ + +DT G +
Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 69
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKS-GQ-PIVLVXXXXX 122
+ M ++ +A VD R +D+L+ L+ G+ PI+LV
Sbjct: 70 D-ALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLD 128
Query: 123 XXXX--XXXLDFYE-LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEF 174
++E L P ++SAL + ++L + +P FF +++
Sbjct: 129 AAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLAL-MPEGPFFYPEDY 182
Score = 39 (18.8 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 882 IDELNGDNLSLRPEG 896
+ EL D L+L PEG
Sbjct: 160 VAELKADLLALMPEG 174
>UNIPROTKB|C9JV49 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR004516 PIRSF:PIRSF001549
InterPro:IPR004154 GO:GO:0005737 SUPFAM:SSF52954 Gene3D:3.40.50.800
Pfam:PF03129 PANTHER:PTHR11476 EMBL:AC116353 HOGENOM:HOG000018075
HGNC:HGNC:4817 IPI:IPI00942264 ProteinModelPortal:C9JV49 SMR:C9JV49
STRING:C9JV49 Ensembl:ENST00000435019 ArrayExpress:C9JV49
Bgee:C9JV49 Uniprot:C9JV49
Length = 466
Score = 107 (42.7 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 1060 NNISYKINTKLVRGMDYYNRTVFE----WTTDKLGSQ----NSICGGGRYDFLIKKFSNK 1111
+ IS+ ++ L RG+DYY ++E T + G + S+ GGRYD L+ F K
Sbjct: 277 DKISFDLS--LARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPK 334
Query: 1112 F--VPASGFAIGIERLIELIKK 1131
VP G +IG+ER+ ++++
Sbjct: 335 GHKVPCVGLSIGVERIFYIVEQ 356
Score = 93 (37.8 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 36/104 (34%), Positives = 52/104 (50%)
Query: 878 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GRYR 935
MY D+ G+ LSLR + T R + N + KR ++ G ++R E P GRYR
Sbjct: 75 MYDLKDQ-GGELLSLRYDLTVPFARYLAMNKV--KKMKR-YHVGKVWRRESPTIVQGRYR 130
Query: 936 QFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
+F Q + G P I DAE + IMC L L L + +++N
Sbjct: 131 EFCQCDFDIAGQFDPMIPDAECLKIMCEIL-SGLQLGDFLIKVN 173
>UNIPROTKB|C9JQB1 [details] [associations]
symbol:NME6 "Nucleoside diphosphate kinase" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005739 GO:GO:0005524 GO:GO:0006183 HOGENOM:HOG000224565
EMBL:AC105267 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 HGNC:HGNC:20567 IPI:IPI00924760
ProteinModelPortal:C9JQB1 SMR:C9JQB1 STRING:C9JQB1
Ensembl:ENST00000447314 UCSC:uc010hju.3 ArrayExpress:C9JQB1
Bgee:C9JQB1 Uniprot:C9JQB1
Length = 141
Score = 127 (49.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 461 KNDVEKFYSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AK 517
K D ++FY H+ R F++ LV FM SGP+ +L +DAI+ R L+G T +A A
Sbjct: 8 KEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAP 67
Query: 518 GTIRADFAESIDKNIVH 534
+IR F + +N H
Sbjct: 68 DSIRGSFGLTDTRNTTH 84
>UNIPROTKB|B4DDY8 [details] [associations]
symbol:HARSL "Histidyl-tRNA synthetase-like, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0004821 "histidine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005524 GO:GO:0005737 EMBL:CH471062
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
EMBL:AC116353 GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
HOGENOM:HOG000018075 HOVERGEN:HBG002731 UniGene:Hs.432560
HGNC:HGNC:4817 EMBL:AK293390 IPI:IPI00966091 SMR:B4DDY8
STRING:B4DDY8 Ensembl:ENST00000508522 UCSC:uc011czr.2
Uniprot:B4DDY8
Length = 481
Score = 107 (42.7 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 1060 NNISYKINTKLVRGMDYYNRTVFE----WTTDKLGSQ----NSICGGGRYDFLIKKFSNK 1111
+ IS+ ++ L RG+DYY ++E T + G + S+ GGRYD L+ F K
Sbjct: 292 DKISFDLS--LARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPK 349
Query: 1112 F--VPASGFAIGIERLIELIKK 1131
VP G +IG+ER+ ++++
Sbjct: 350 GHKVPCVGLSIGVERIFYIVEQ 371
Score = 93 (37.8 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 36/104 (34%), Positives = 52/104 (50%)
Query: 878 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GRYR 935
MY D+ G+ LSLR + T R + N + KR ++ G ++R E P GRYR
Sbjct: 90 MYDLKDQ-GGELLSLRYDLTVPFARYLAMNKV--KKMKR-YHVGKVWRRESPTIVQGRYR 145
Query: 936 QFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
+F Q + G P I DAE + IMC L L L + +++N
Sbjct: 146 EFCQCDFDIAGQFDPMIPDAECLKIMCEIL-SGLQLGDFLIKVN 188
>MGI|MGI:1918041 [details] [associations]
symbol:Hars2 "histidyl-tRNA synthetase 2, mitochondrial
(putative)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 MGI:MGI:1918041 GO:GO:0005739 GO:GO:0005524
GO:GO:0005759 SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 OMA:NKIKRAC
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 HOGENOM:HOG000018075
HOVERGEN:HBG002731 CTD:23438 EMBL:BC004596 IPI:IPI00116138
RefSeq:NP_542367.1 UniGene:Mm.282700 ProteinModelPortal:Q99KK9
SMR:Q99KK9 STRING:Q99KK9 PhosphoSite:Q99KK9 PaxDb:Q99KK9
PRIDE:Q99KK9 DNASU:70791 Ensembl:ENSMUST00000152954 GeneID:70791
KEGG:mmu:70791 UCSC:uc008eor.1 InParanoid:Q99KK9 NextBio:332262
Bgee:Q99KK9 Genevestigator:Q99KK9 GermOnline:ENSMUSG00000019143
Uniprot:Q99KK9
Length = 505
Score = 107 (42.7 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 1066 INTKLVRGMDYYNRTVFEW----TTDKLGSQN----SICGGGRYDFLIKKFSNK--FVPA 1115
++ L RG+DYY ++E + + G + S+ GGRYD L+ +F K VP
Sbjct: 320 LDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDPKGHHVPC 379
Query: 1116 SGFAIGIERLIELIKK 1131
G +IG+ER+ L+++
Sbjct: 380 VGLSIGVERIFYLVEQ 395
Score = 93 (37.8 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 37/104 (35%), Positives = 51/104 (49%)
Query: 878 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GRYR 935
MY D+ G+ LSLR + T R + N L KR + G ++R E P GRYR
Sbjct: 114 MYDLKDQ-GGELLSLRYDLTVPFARYLAMNKL--KKMKR-YQVGKVWRRESPAIAQGRYR 169
Query: 936 QFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
+F Q + G P I DAE + IMC L L L + +++N
Sbjct: 170 EFCQCDFDIAGEFDPMIPDAECLRIMCEIL-SGLQLGDFLIKVN 212
>UNIPROTKB|P49590 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9606 "Homo sapiens" [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0004821 "histidine-tRNA ligase
activity" evidence=NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0005524 "ATP binding" evidence=NAS] [GO:0005759 "mitochondrial
matrix" evidence=TAS] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR002314
InterPro:IPR004516 InterPro:IPR006195 InterPro:IPR015807
Pfam:PF00587 PIRSF:PIRSF001549 PROSITE:PS50862 InterPro:IPR004154
GO:GO:0005524 GO:GO:0005759 GO:GO:0006418 SUPFAM:SSF52954
Orphanet:2855 Gene3D:3.40.50.800 Pfam:PF03129 CleanEx:HS_HARS2
PANTHER:PTHR11476 eggNOG:COG0124 KO:K01892 GO:GO:0004821
GO:GO:0006427 TIGRFAMs:TIGR00442 HOGENOM:HOG000018075
HOVERGEN:HBG002731 OrthoDB:EOG4D26PM EMBL:U18936 BRENDA:6.1.1.21
CTD:23438 EMBL:U18937 EMBL:BC007680 EMBL:BC014982 IPI:IPI00027445
PIR:I38913 PIR:I38915 RefSeq:NP_036340.1 UniGene:Hs.432560
ProteinModelPortal:P49590 SMR:P49590 DIP:DIP-59626N IntAct:P49590
STRING:P49590 PhosphoSite:P49590 DMDM:1351156 PaxDb:P49590
PeptideAtlas:P49590 PRIDE:P49590 DNASU:23438
Ensembl:ENST00000230771 GeneID:23438 KEGG:hsa:23438 UCSC:uc003lgx.3
GeneCards:GC05P140053 HGNC:HGNC:4817 HPA:HPA035941 MIM:600783
neXtProt:NX_P49590 PharmGKB:PA29192 InParanoid:P49590 OMA:CGGGNFK
GenomeRNAi:23438 NextBio:45705 ArrayExpress:P49590 Bgee:P49590
Genevestigator:P49590 GermOnline:ENSG00000112855 Uniprot:P49590
Length = 506
Score = 107 (42.7 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 1060 NNISYKINTKLVRGMDYYNRTVFE----WTTDKLGSQ----NSICGGGRYDFLIKKFSNK 1111
+ IS+ ++ L RG+DYY ++E T + G + S+ GGRYD L+ F K
Sbjct: 317 DKISFDLS--LARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPK 374
Query: 1112 F--VPASGFAIGIERLIELIKK 1131
VP G +IG+ER+ ++++
Sbjct: 375 GHKVPCVGLSIGVERIFYIVEQ 396
Score = 93 (37.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 36/104 (34%), Positives = 52/104 (50%)
Query: 878 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GRYR 935
MY D+ G+ LSLR + T R + N + KR ++ G ++R E P GRYR
Sbjct: 115 MYDLKDQ-GGELLSLRYDLTVPFARYLAMNKV--KKMKR-YHVGKVWRRESPTIVQGRYR 170
Query: 936 QFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
+F Q + G P I DAE + IMC L L L + +++N
Sbjct: 171 EFCQCDFDIAGQFDPMIPDAECLKIMCEIL-SGLQLGDFLIKVN 213
>UNIPROTKB|F1M9C9 [details] [associations]
symbol:Hars2l "Protein Hars2l" species:10116 "Rattus
norvegicus" [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 CTD:23438 IPI:IPI00562572
RefSeq:NP_001014034.2 UniGene:Rn.139312 Ensembl:ENSRNOT00000021797
GeneID:307491 KEGG:rno:307491 OMA:VVDGMFA NextBio:657480
ArrayExpress:F1M9C9 Uniprot:F1M9C9
Length = 507
Score = 107 (42.7 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 1066 INTKLVRGMDYYNRTVFEW----TTDKLGSQN----SICGGGRYDFLIKKFSNK--FVPA 1115
++ L RG+DYY ++E + + G + S+ GGRYD L+ +F K VP
Sbjct: 322 LDLSLARGLDYYTGVIYEAVLLESPAQAGKETLNVGSVAAGGRYDRLVAQFDPKGHSVPC 381
Query: 1116 SGFAIGIERLIELIK-KININ 1135
G +IG+ER+ L++ K+ I+
Sbjct: 382 VGLSIGVERIFYLVEQKMKIS 402
Score = 93 (37.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 37/104 (35%), Positives = 51/104 (49%)
Query: 878 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQY--GRYR 935
MY D+ G+ LSLR + T R + N L KR + G ++R E P GRYR
Sbjct: 116 MYDLEDQ-GGELLSLRYDLTVPFARYLAMNKL--KRMKR-YQVGKVWRRESPAIVQGRYR 171
Query: 936 QFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
+F Q + G P I DAE + IMC L L L + +++N
Sbjct: 172 EFCQCDFDIAGEFDPMIPDAECLRIMCEIL-SGLQLGDFLIKVN 214
>UNIPROTKB|P06616 [details] [associations]
symbol:era "GTP-binding protein" species:83333 "Escherichia
coli K-12" [GO:0005829 "cytosol" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IDA] [GO:0070181 "SSU rRNA binding"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0005525 "GTP binding" evidence=IEA;IDA] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0006468 EMBL:D64044
EMBL:U36841 GO:GO:0042274 GO:GO:0070181 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:M14658 EMBL:X02673 PIR:S44713 RefSeq:NP_417061.1
RefSeq:YP_490794.1 PDB:1EGA PDB:3IEU PDBsum:1EGA PDBsum:3IEU
ProteinModelPortal:P06616 SMR:P06616 DIP:DIP-9521N IntAct:P06616
MINT:MINT-1248282 PhosSite:P010424 PRIDE:P06616
EnsemblBacteria:EBESCT00000004013 EnsemblBacteria:EBESCT00000004014
EnsemblBacteria:EBESCT00000015240 GeneID:12934226 GeneID:947036
KEGG:ecj:Y75_p2519 KEGG:eco:b2566 PATRIC:32120531 EchoBASE:EB0266
EcoGene:EG10270 HOGENOM:HOG000245597 BioCyc:EcoCyc:EG10270-MONOMER
BioCyc:ECOL316407:JW2550-MONOMER EvolutionaryTrace:P06616
Genevestigator:P06616 Uniprot:P06616
Length = 301
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+AIVG+PNVGKSTL+N LLG+ IT TTR I + + I +DT G+
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
K I + SI + +VI +++ + + D + N + E +I+ VNK D
Sbjct: 71 K--RAINRLMNKAASSSIGDVELVIFVVEGTR-WTPDDEMVLNKLREGKAPVILAVNKVD 127
Query: 305 S 305
+
Sbjct: 128 N 128
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N+L + ++ + TR R G G I +DT G E
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70
Query: 65 KKGIMHEMTKQTKQAXXXXXXXXXXVDGRQGLVEQDKLITNFLRKSGQPIVL 116
K+ I M K + V+G + + D+++ N LR+ P++L
Sbjct: 71 KRAINRLMNKAASSSIGDVELVIFVVEGTRWTPD-DEMVLNKLREGKAPVIL 121
>UNIPROTKB|F1PMF2 [details] [associations]
symbol:NME7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006241 "CTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004550 "nucleoside diphosphate
kinase activity" evidence=IEA] InterPro:IPR001564
InterPro:IPR011410 Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 InterPro:IPR006602 SMART:SM00676
PROSITE:PS51336 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
GeneTree:ENSGT00700000104331 OMA:MEIQQNN EMBL:AAEX03005219
Ensembl:ENSCAFT00000024207 Uniprot:F1PMF2
Length = 376
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 45/151 (29%), Positives = 70/151 (46%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M LS+ + F
Sbjct: 79 GDQYTARQLGSRKEKTLALIKPDAVSK--AGEIIEMINKAGFTITKLKMMMLSRKEATDF 136
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADF 524
+ H++RPF L+ F+ SGP + +DAI + + L+G + A A G++RA F
Sbjct: 137 HIDHQSRPFLNELIQFITSGPTIAMEILRDDAICEWKRLLGPANSGMARTDAPGSLRALF 196
Query: 525 AESIDKNIVHELGEMPFRAKQLQKWIHKFGV 555
+N H A++++ + GV
Sbjct: 197 GTDGIRNAAHGPDSFASAAREMELFFPSSGV 227
>GENEDB_PFALCIPARUM|PF14_0428 [details] [associations]
symbol:PF14_0428 "histidine --tRNA ligase,
putative" species:5833 "Plasmodium falciparum" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004516
InterPro:IPR006195 PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005524
GO:GO:0005737 EMBL:AE014187 GO:GO:0006418 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
GO:GO:0004821 RefSeq:XP_001348602.1 ProteinModelPortal:Q8IL22
PRIDE:Q8IL22 EnsemblProtists:PF14_0428:mRNA GeneID:812010
KEGG:pfa:PF14_0428 EuPathDB:PlasmoDB:PF3D7_1445100
HOGENOM:HOG000282110 ProtClustDB:CLSZ2432159 Uniprot:Q8IL22
Length = 1132
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 36/125 (28%), Positives = 68/125 (54%)
Query: 1009 IKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNI--SYKI 1066
I +L L+ V++ ++E +N L+ ++ ++H I +L + N+ +
Sbjct: 813 ISKTLSLSPFLVIEFLRNDLKESTLNEEYKLEI--QNCINHLEQIFDLLKHFNMLNQFSF 870
Query: 1067 NTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLI 1126
+ L RG+DYY +FE+ + S+ GGRYDFLI+ +++P+ G +IGIER+I
Sbjct: 871 DLSLARGLDYYTGIIFEFVLLSETNVGSVAAGGRYDFLIRNKRREYLPSVGASIGIERII 930
Query: 1127 ELIKK 1131
+ ++
Sbjct: 931 TIAEE 935
Score = 50 (22.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 35/159 (22%), Positives = 67/159 (42%)
Query: 427 SLIDALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMIS 486
+L++ EKNI+ +I +++I ++ L +D+ + N P KN ++ +
Sbjct: 417 NLVNIYEKNILDKIELMFKQISEQV---QKNNLPNSDIICNQKENDNTP--KNQYRYLNN 471
Query: 487 GPV---------FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELG 537
PV FI V I H ++ D I+A I + + VH +G
Sbjct: 472 SPVEMLKKLNCVFINVTHLITDIIMHLNILND---IRAYNKAISQHMKQKKVSSCVHNVG 528
Query: 538 EMPFRAKQLQKWIHKFGVSDFNKMTDLS-MSLRKKLKNS 575
+ + +++ F S+ N + + S ++ KKL S
Sbjct: 529 ---VGCNEFKNFLYSFLSSENNILLNKSYVNKDKKLVTS 564
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 340 NINSFMESINHVYD-SSIIHLSTSRI 364
N+N F SI+ V + SS+I L+T +I
Sbjct: 196 NLNDFNRSIHIVIEKSSVIFLNTYKI 221
>UNIPROTKB|Q8IL22 [details] [associations]
symbol:PF14_0428 "Histidine--tRNA ligase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004821
"histidine-tRNA ligase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004516
InterPro:IPR006195 PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005524
GO:GO:0005737 EMBL:AE014187 GO:GO:0006418 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 KO:K01892
GO:GO:0004821 RefSeq:XP_001348602.1 ProteinModelPortal:Q8IL22
PRIDE:Q8IL22 EnsemblProtists:PF14_0428:mRNA GeneID:812010
KEGG:pfa:PF14_0428 EuPathDB:PlasmoDB:PF3D7_1445100
HOGENOM:HOG000282110 ProtClustDB:CLSZ2432159 Uniprot:Q8IL22
Length = 1132
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 36/125 (28%), Positives = 68/125 (54%)
Query: 1009 IKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNI--SYKI 1066
I +L L+ V++ ++E +N L+ ++ ++H I +L + N+ +
Sbjct: 813 ISKTLSLSPFLVIEFLRNDLKESTLNEEYKLEI--QNCINHLEQIFDLLKHFNMLNQFSF 870
Query: 1067 NTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLI 1126
+ L RG+DYY +FE+ + S+ GGRYDFLI+ +++P+ G +IGIER+I
Sbjct: 871 DLSLARGLDYYTGIIFEFVLLSETNVGSVAAGGRYDFLIRNKRREYLPSVGASIGIERII 930
Query: 1127 ELIKK 1131
+ ++
Sbjct: 931 TIAEE 935
Score = 50 (22.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 35/159 (22%), Positives = 67/159 (42%)
Query: 427 SLIDALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLVNFMIS 486
+L++ EKNI+ +I +++I ++ L +D+ + N P KN ++ +
Sbjct: 417 NLVNIYEKNILDKIELMFKQISEQV---QKNNLPNSDIICNQKENDNTP--KNQYRYLNN 471
Query: 487 GPV---------FIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAESIDKNIVHELG 537
PV FI V I H ++ D I+A I + + VH +G
Sbjct: 472 SPVEMLKKLNCVFINVTHLITDIIMHLNILND---IRAYNKAISQHMKQKKVSSCVHNVG 528
Query: 538 EMPFRAKQLQKWIHKFGVSDFNKMTDLS-MSLRKKLKNS 575
+ + +++ F S+ N + + S ++ KKL S
Sbjct: 529 ---VGCNEFKNFLYSFLSSENNILLNKSYVNKDKKLVTS 564
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 340 NINSFMESINHVYD-SSIIHLSTSRI 364
N+N F SI+ V + SS+I L+T +I
Sbjct: 196 NLNDFNRSIHIVIEKSSVIFLNTYKI 221
>UNIPROTKB|F1LNL9 [details] [associations]
symbol:Nme7 "Nucleoside diphosphate kinase 7" species:10116
"Rattus norvegicus" [GO:0003351 "epithelial cilium movement"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0042073 "intraflagellar
transport" evidence=IEA] [GO:0060830 "ciliary receptor clustering
involved in smoothened signaling pathway" evidence=IEA] [GO:0060972
"left/right pattern formation" evidence=IEA] InterPro:IPR001564
InterPro:IPR011410 Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243
SMART:SM00562 RGD:619880 GO:GO:0005524 GO:GO:0005813 GO:GO:0060972
InterPro:IPR006602 SMART:SM00676 PROSITE:PS51336 GO:GO:0006183
GO:GO:0004550 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
PANTHER:PTHR11349 SUPFAM:SSF54919 GeneTree:ENSGT00700000104331
IPI:IPI00213315 Ensembl:ENSRNOT00000058897 ArrayExpress:F1LNL9
Uniprot:F1LNL9
Length = 382
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M LS+ + F
Sbjct: 85 GDQYTARQLGSRKEKTLALIKPDAVSK--AGEIIEMINKSGFTITKLRMMTLSRKEAADF 142
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADF 524
+ H +RPF+ L+ F+ SGPV + +DAI + + L+G + A A G++RA F
Sbjct: 143 HVDHHSRPFYNELIQFITSGPVIAMEILRDDAICEWKRLLGPANSGIARSEAPGSVRALF 202
Query: 525 AESIDKNIVHELGEMPFRAKQLQKWIHKFG 554
+N H A++++ + G
Sbjct: 203 GTDGIRNAAHGSDTFESAAREMELFFPSSG 232
>RGD|619880 [details] [associations]
symbol:Nme7 "NME/NM23 family member 7" species:10116 "Rattus
norvegicus" [GO:0003351 "epithelial cilium movement" evidence=ISO]
[GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0007368 "determination
of left/right symmetry" evidence=ISO] [GO:0007420 "brain
development" evidence=ISO] [GO:0042073 "intraflagellar transport"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0060830 "ciliary receptor clustering involved in smoothened
signaling pathway" evidence=ISO] [GO:0060972 "left/right pattern
formation" evidence=ISO] InterPro:IPR001564 InterPro:IPR011410
Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243 SMART:SM00562
RGD:619880 GO:GO:0005524 GO:GO:0005813 GO:GO:0046872 GO:GO:0060972
InterPro:IPR006602 SMART:SM00676 PROSITE:PS51336 GO:GO:0006183
GO:GO:0004550 eggNOG:COG0105 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 CTD:29922 HOGENOM:HOG000224566 HOVERGEN:HBG006457
OrthoDB:EOG4JHCFT EMBL:AF202049 IPI:IPI00213315 RefSeq:NP_612541.1
UniGene:Rn.82718 ProteinModelPortal:Q9QXL7 STRING:Q9QXL7
GeneID:171566 KEGG:rno:171566 UCSC:RGD:619880 NextBio:622579
ArrayExpress:Q9QXL7 Genevestigator:Q9QXL7
GermOnline:ENSRNOG00000002898 Uniprot:Q9QXL7
Length = 395
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M LS+ + F
Sbjct: 98 GDQYTARQLGSRKEKTLALIKPDAVSK--AGEIIEMINKSGFTITKLRMMTLSRKEAADF 155
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADF 524
+ H +RPF+ L+ F+ SGPV + +DAI + + L+G + A A G++RA F
Sbjct: 156 HVDHHSRPFYNELIQFITSGPVIAMEILRDDAICEWKRLLGPANSGIARSEAPGSVRALF 215
Query: 525 AESIDKNIVHELGEMPFRAKQLQKWIHKFG 554
+N H A++++ + G
Sbjct: 216 GTDGIRNAAHGSDTFESAAREMELFFPSSG 245
>TIGR_CMR|ECH_0476 [details] [associations]
symbol:ECH_0476 "GTP-binding protein Era" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
HOGENOM:HOG000245597 RefSeq:YP_507292.1 ProteinModelPortal:Q2GGZ1
STRING:Q2GGZ1 GeneID:3928006 KEGG:ech:ECH_0476 PATRIC:20576424
BioCyc:ECHA205920:GJNR-478-MONOMER Uniprot:Q2GGZ1
Length = 296
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/120 (37%), Positives = 61/120 (50%)
Query: 186 AIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNK 245
AIVG N GKSTLIN L+G+ TTR + ++ N + I IDT GI K
Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSP-K 70
Query: 246 TFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDS 305
T +EKF V S+ VILLLD + ++ I + I +S + I+ VNK D+
Sbjct: 71 T--KLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRIKQSNINAILVVNKIDT 128
>UNIPROTKB|E5RHP0 [details] [associations]
symbol:NME1 "Nucleoside diphosphate kinase A" species:9606
"Homo sapiens" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 GO:GO:0005524 GO:GO:0006183 EMBL:AC005839
GO:GO:0004550 GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141
PANTHER:PTHR11349 SUPFAM:SSF54919 HGNC:HGNC:7849 IPI:IPI00790982
SMR:E5RHP0 Ensembl:ENST00000475573 Ensembl:ENST00000511355
Uniprot:E5RHP0
Length = 82
Score = 123 (48.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 424 RTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKFYSIHKNRPFFKNLV 481
RTF I D +++ +VGEI R+E+ G +++ + S++ +++ Y K+RPFF LV
Sbjct: 6 RTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLV 65
Query: 482 NFMISGPV 489
+M SGPV
Sbjct: 66 KYMHSGPV 73
>UNIPROTKB|E9PNU1 [details] [associations]
symbol:NME7 "Nucleoside diphosphate kinase 7" species:9606
"Homo sapiens" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 EMBL:AL031726
InterPro:IPR006602 SMART:SM00676 PROSITE:PS51336 EMBL:AL356852
GO:GO:0006183 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919 EMBL:Z99758
HGNC:HGNC:20461 ChiTaRS:NME7 IPI:IPI00555922
ProteinModelPortal:E9PNU1 SMR:E9PNU1 Ensembl:ENST00000528517
ArrayExpress:E9PNU1 Bgee:E9PNU1 Uniprot:E9PNU1
Length = 256
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M LS+ + F
Sbjct: 79 GDQYTARQLGSRKEKTLALIKPDAISK--AGEIIEIINKAGFTITKLKMMMLSRKEALDF 136
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAES 527
+ H++RPFF L+ F+ +GP+ + +DAI + + L+G P A G R D +ES
Sbjct: 137 HVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLG---P--ANSGVARTDASES 191
Query: 528 I 528
I
Sbjct: 192 I 192
>TIGR_CMR|ECH_0060 [details] [associations]
symbol:ECH_0060 "tRNA modification GTPase TrmE"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291 OMA:IDFPEEV
RefSeq:YP_506891.1 ProteinModelPortal:Q2GI42 STRING:Q2GI42
GeneID:3927317 KEGG:ech:ECH_0060 PATRIC:20575687
BioCyc:ECHA205920:GJNR-60-MONOMER Uniprot:Q2GI42
Length = 439
Score = 121 (47.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
I V I+G+PN GKSTL N L + I + GTTRD +++ + I+IDTAGIR
Sbjct: 212 IYVTILGEPNSGKSTLFNHLAKRDIAIVSEYAGTTRDPLEAHIDVAGYPIIIIDTAGIRE 271
Query: 243 RNKTFE 248
E
Sbjct: 272 STDPVE 277
Score = 109 (43.4 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF---- 60
+ ++G PN GKSTLFN L A+V+ Y G TRD + IIIDT G
Sbjct: 214 VTILGEPNSGKSTLFNHLAKRDIAIVSEYAGTTRDPLEAHIDVAGYPIIIIDTAGIREST 273
Query: 61 EPEVKKGIMHEMTK 74
+P ++GI K
Sbjct: 274 DPVEQEGIKRAKLK 287
Score = 73 (30.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 31/95 (32%), Positives = 42/95 (44%)
Query: 1052 GIQKI-LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDF-----LI 1105
GI++ L N +KI D +NR + DK SIC + D LI
Sbjct: 280 GIKRAKLKAENADFKIVMLPYEKRDIFNREIMSLIDDK-----SICILSKADNITDQKLI 334
Query: 1106 KKFSNKFVPASGFA-IGIERLIELIK-KININHNF 1138
F F+P S + IGIE L+ LIK K+ + F
Sbjct: 335 PVFDFSFIPISVYCNIGIENLLNLIKQKVEKDFQF 369
>UNIPROTKB|C9J1J2 [details] [associations]
symbol:NME6 "Nucleoside diphosphate kinase 6" species:9606
"Homo sapiens" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001564 Pfam:PF00334 PRINTS:PR01243 SMART:SM00562
GO:GO:0005739 GO:GO:0005524 GO:GO:0006183 HOGENOM:HOG000224565
EMBL:AC105267 GO:GO:0004550 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
HGNC:HGNC:20567 IPI:IPI00927746 ProteinModelPortal:C9J1J2
SMR:C9J1J2 STRING:C9J1J2 Ensembl:ENST00000456495
ArrayExpress:C9J1J2 Bgee:C9J1J2 Uniprot:C9J1J2
Length = 111
Score = 122 (48.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 425 TFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKL--SKNDVEKFYSIHKNRPFFKNL 480
T +LI DA+ ++ E ++ + + K + M++L K D ++FY H+ R F++ L
Sbjct: 14 TLALIKPDAVAHPLILEAVHQ-QILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFYQRL 72
Query: 481 VNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA 515
V FM SGP+ +L +DAI+ R L+G T +A
Sbjct: 73 VEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRA 107
>UNIPROTKB|P25522 [details] [associations]
symbol:mnmE "GTP-binding protein with a role in
modification of tRNA" species:83333 "Escherichia coli K-12"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009268 "response to pH" evidence=IMP] [GO:0030488 "tRNA
methylation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IEA;IDA] [GO:0005525 "GTP binding" evidence=IEA;IDA]
[GO:0006805 "xenobiotic metabolic process" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0003924 GO:GO:0009268
GO:GO:0006805 EMBL:L10328 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
EMBL:S57109 PIR:A38160 PIR:C65173 RefSeq:NP_418162.1
RefSeq:YP_491728.1 PDB:1RFL PDB:2GJ8 PDB:2GJ9 PDB:2GJA PDBsum:1RFL
PDBsum:2GJ8 PDBsum:2GJ9 PDBsum:2GJA ProteinModelPortal:P25522
SMR:P25522 DIP:DIP-11033N IntAct:P25522 PRIDE:P25522
EnsemblBacteria:EBESCT00000002643 EnsemblBacteria:EBESCT00000017912
GeneID:12932528 GeneID:948222 KEGG:ecj:Y75_p3466 KEGG:eco:b3706
PATRIC:32122909 EchoBASE:EB0990 EcoGene:EG10997
BioCyc:EcoCyc:EG10997-MONOMER BioCyc:ECOL316407:JW3684-MONOMER
EvolutionaryTrace:P25522 Genevestigator:P25522 GO:GO:0030488
Uniprot:P25522
Length = 454
Score = 153 (58.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KV I G+PN GKS+L+N+L G I D GTTRD ++ + +IDTAG+
Sbjct: 215 EGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL 274
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI-ANFIYESGRSLIVC 299
R + + +E+ + + + I +A+ V+ ++D + I FI L +
Sbjct: 275 REAS---DEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPIT 331
Query: 300 V--NKWD 304
V NK D
Sbjct: 332 VVRNKAD 338
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 859 INAACGQLSGEETDIVKKEMYSFIDELNGDNL 890
+ A G+L EE + ++ + E D+L
Sbjct: 411 LGAWAGELLAEELRLAQQNLSEITGEFTSDDL 442
>TIGR_CMR|SO_0003 [details] [associations]
symbol:SO_0003 "tRNA modification GTPase TrmE"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0008175 "tRNA methyltransferase
activity" evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 RefSeq:NP_715645.2 ProteinModelPortal:Q8CX52
GeneID:1167901 KEGG:son:SO_0003 PATRIC:23519697 Uniprot:Q8CX52
Length = 453
Score = 153 (58.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 41/127 (32%), Positives = 66/127 (51%)
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KV I G+PN GKS+L+N+L G+ I + GTTRD ++ + +IDTAG+
Sbjct: 214 EGMKVVIAGRPNAGKSSLLNALAGKESAIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGL 273
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI-ANFIYESGRSLIVC 299
R T + +E+ + + I A+ V+ ++D + +I +FI +L V
Sbjct: 274 R---DTTDTVEQIGIERAWNEINSADRVLFMVDGTTTTAVDPHDIWPDFINRLPTNLGVT 330
Query: 300 V--NKWD 304
V NK D
Sbjct: 331 VIRNKAD 337
Score = 37 (18.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 884 ELNGDNLSLRPEGTASVIRSVIENNLIYDGPKR 916
+L G+NL + E SV R + L D K+
Sbjct: 337 DLTGENLEMTEEKGYSVYRISAKTGLGVDELKQ 369
>ZFIN|ZDB-GENE-060526-84 [details] [associations]
symbol:eral1 "Era G-protein-like 1 (E. coli)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=ISS] [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00449 PROSITE:PS50823 ZFIN:ZDB-GENE-060526-84
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005743
GO:GO:0005759 GO:GO:0019843 GO:GO:0000028 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 CTD:26284
GeneTree:ENSGT00390000013800 HOGENOM:HOG000245598 SUPFAM:SSF54814
eggNOG:COG1159 HOVERGEN:HBG051495 OrthoDB:EOG44XJGX EMBL:BX548073
EMBL:BC163468 EMBL:BC163480 IPI:IPI00799669 RefSeq:NP_001122219.1
UniGene:Dr.155067 ProteinModelPortal:B0S6U7 STRING:B0S6U7
Ensembl:ENSDART00000083778 GeneID:569087 KEGG:dre:569087
OMA:TTTRNIS NextBio:20889500 Bgee:B0S6U7 Uniprot:B0S6U7
Length = 447
Score = 147 (56.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+KVAIVG PN GKSTL N LLG TTR + N+ + +L+DT G+
Sbjct: 111 LKVAIVGSPNAGKSTLTNQLLGRKLFAVSSKVHTTRSRAVGVLTENDTQIVLLDTPGLTT 170
Query: 243 RNKTFE-VIEKFSVIKTLKSILEANVVILLLD 273
+ K +E ++ KS+ EA++V++L+D
Sbjct: 171 QIKAKRHQLENSLLVDPFKSLKEADLVVVLVD 202
Score = 43 (20.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 527 SIDKNIVHELGEMPFRAKQLQKWIHKFGVSDFNKMTDLSMS-LRKKLKNSVYIKAPHIMS 585
SID V L F A + +W + V D+ + +R+KL ++ + P+ M+
Sbjct: 320 SIDHEDVETLKRYLFVAAKPCQWQYHSEVLTDQSPEDVCFNTIREKLLQNLPKEVPYTMT 379
Query: 586 DQI 588
+I
Sbjct: 380 QEI 382
>UNIPROTKB|Q5E9Y9 [details] [associations]
symbol:NME7 "Nucleoside diphosphate kinase 7" species:9913
"Bos taurus" [GO:0060972 "left/right pattern formation"
evidence=IEA] [GO:0060830 "ciliary receptor clustering involved in
smoothened signaling pathway" evidence=IEA] [GO:0042073
"intraflagellar transport" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0003351 "epithelial cilium movement" evidence=IEA] [GO:0004550
"nucleoside diphosphate kinase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006241 "CTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] InterPro:IPR001564
InterPro:IPR011410 Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243
SMART:SM00562 GO:GO:0005524 GO:GO:0005813 GO:GO:0046872
GO:GO:0060972 InterPro:IPR006602 SMART:SM00676 PROSITE:PS51336
GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105 KO:K00940 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 GeneTree:ENSGT00700000104331 EMBL:BT020780
EMBL:BC109996 IPI:IPI00701434 RefSeq:NP_001015656.1 UniGene:Bt.6993
ProteinModelPortal:Q5E9Y9 STRING:Q5E9Y9 PRIDE:Q5E9Y9
Ensembl:ENSBTAT00000046902 GeneID:534611 KEGG:bta:534611 CTD:29922
HOGENOM:HOG000224566 HOVERGEN:HBG006457 InParanoid:Q5E9Y9
OMA:MEIQQNN OrthoDB:EOG4JHCFT NextBio:20876468 ArrayExpress:Q5E9Y9
Uniprot:Q5E9Y9
Length = 377
Score = 141 (54.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 46/155 (29%), Positives = 72/155 (46%)
Query: 407 LKYIGNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKND 463
L Y G+ Y R L +T +LI DA+ K GEI K G + M LS+ +
Sbjct: 76 LDY-GDQYTARQLGSKKEKTLALIKPDAVSK--AGEIIEIINKAGFTLTKLKMMTLSRKE 132
Query: 464 VEKFYSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTI 520
F+ H++RPF L+ F+ SGP+ + +DA+ + + L+G + A A +I
Sbjct: 133 ATDFHIDHQSRPFLNELIQFITSGPIIAMEILRDDAVCEWKRLLGPANSGLARTDAPESI 192
Query: 521 RADFAESIDKNIVHELGEMPFRAKQLQKWIHKFGV 555
RA F KN H A++++ + GV
Sbjct: 193 RALFGTDGIKNAAHGPDSFACAAREMELFFPSSGV 227
>UNIPROTKB|B4DXC8 [details] [associations]
symbol:NME7 "Nucleoside diphosphate kinase 7" species:9606
"Homo sapiens" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006183
"GTP biosynthetic process" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0006241 "CTP biosynthetic
process" evidence=IEA] InterPro:IPR001564 InterPro:IPR011410
Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 EMBL:AL031726 InterPro:IPR006602 SMART:SM00676
PROSITE:PS51336 EMBL:AL356852 GO:GO:0006183 GO:GO:0004550
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 HOVERGEN:HBG006457 EMBL:Z99758 UniGene:Hs.706952
HGNC:HGNC:20461 ChiTaRS:NME7 EMBL:AK301917 IPI:IPI00984848
SMR:B4DXC8 STRING:B4DXC8 Ensembl:ENST00000525440 Uniprot:B4DXC8
Length = 339
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M LS+ + F
Sbjct: 79 GDQYTARQLGSRKEKTLALIKPDAISK--AGEIIEIINKAGFTITKLKMMMLSRKEALDF 136
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAES 527
+ H++RPFF L+ F+ +GP+ + +DAI + + L+G P A G R D +ES
Sbjct: 137 HVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLG---P--ANSGVARTDASES 191
Query: 528 I 528
I
Sbjct: 192 I 192
>TIGR_CMR|SPO_3895 [details] [associations]
symbol:SPO_3895 "tRNA modification GTPase TrmE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0003924
GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_169083.1
ProteinModelPortal:Q5LLM7 GeneID:3196284 KEGG:sil:SPO3895
PATRIC:23381297 Uniprot:Q5LLM7
Length = 428
Score = 141 (54.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 31/90 (34%), Positives = 51/90 (56%)
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
+VAI+G PN GKSTL+N L G +T + GTTRD I+ + L+DTAG+R
Sbjct: 215 EVAIIGPPNAGKSTLLNMLAGREAALTSEVAGTTRDVIEVRMDLGGLPVTLLDTAGLR-- 272
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLD 273
+T +++E + + +A++ + L +
Sbjct: 273 -ETGDLVEGMGIALARRRADQADLRVFLTE 301
>UNIPROTKB|Q9Y5B8 [details] [associations]
symbol:NME7 "Nucleoside diphosphate kinase 7" species:9606
"Homo sapiens" [GO:0006183 "GTP biosynthetic process" evidence=IEA]
[GO:0006228 "UTP biosynthetic process" evidence=IEA] [GO:0006241
"CTP biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA]
[GO:0003351 "epithelial cilium movement" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0042073 "intraflagellar
transport" evidence=IEA] [GO:0060830 "ciliary receptor clustering
involved in smoothened signaling pathway" evidence=IEA] [GO:0060972
"left/right pattern formation" evidence=IEA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001564 InterPro:IPR011410
Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243 SMART:SM00562
GO:GO:0005524 GO:GO:0005813 GO:GO:0046872 EMBL:CH471067
EMBL:AL031726 GO:GO:0060972 InterPro:IPR006602 SMART:SM00676
PROSITE:PS51336 EMBL:AL356852 GO:GO:0006183 GO:GO:0004550
eggNOG:COG0105 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 PANTHER:PTHR11349 SUPFAM:SSF54919
PROSITE:PS00469 CTD:29922 HOGENOM:HOG000224566 HOVERGEN:HBG006457
OMA:MEIQQNN OrthoDB:EOG4JHCFT EMBL:AF153191 EMBL:AK094513
EMBL:AK290701 EMBL:Z99758 EMBL:BC006983 IPI:IPI00294997
IPI:IPI00377134 RefSeq:NP_037462.1 RefSeq:NP_932076.1
UniGene:Hs.706952 ProteinModelPortal:Q9Y5B8 SMR:Q9Y5B8
IntAct:Q9Y5B8 MINT:MINT-1452335 STRING:Q9Y5B8 PhosphoSite:Q9Y5B8
DMDM:12230353 PRIDE:Q9Y5B8 DNASU:29922 Ensembl:ENST00000367811
Ensembl:ENST00000472647 GeneID:29922 KEGG:hsa:29922 UCSC:uc001gft.3
GeneCards:GC01M169101 HGNC:HGNC:20461 HPA:HPA038014 MIM:613465
neXtProt:NX_Q9Y5B8 PharmGKB:PA134962167 InParanoid:Q9Y5B8
PhylomeDB:Q9Y5B8 ChEMBL:CHEMBL2229 ChiTaRS:NME7 GenomeRNAi:29922
NextBio:52524 ArrayExpress:Q9Y5B8 Bgee:Q9Y5B8 CleanEx:HS_NME7
Genevestigator:Q9Y5B8 GermOnline:ENSG00000143156 Uniprot:Q9Y5B8
Length = 376
Score = 140 (54.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M LS+ + F
Sbjct: 79 GDQYTARQLGSRKEKTLALIKPDAISK--AGEIIEIINKAGFTITKLKMMMLSRKEALDF 136
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAAKGTIRADFAES 527
+ H++RPFF L+ F+ +GP+ + +DAI + + L+G P A G R D +ES
Sbjct: 137 HVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLG---P--ANSGVARTDASES 191
Query: 528 I 528
I
Sbjct: 192 I 192
>MGI|MGI:2449121 [details] [associations]
symbol:Nme7 "NME/NM23 family member 7" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003351 "epithelial cilium movement" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006165 "nucleoside diphosphate phosphorylation" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0009117 "nucleotide metabolic process"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0042073 "intraflagellar
transport" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060830 "ciliary receptor clustering involved in
smoothened signaling pathway" evidence=IMP] [GO:0060972 "left/right
pattern formation" evidence=IMP] InterPro:IPR001564
InterPro:IPR011410 Pfam:PF00334 PIRSF:PIRSF036503 PRINTS:PR01243
SMART:SM00562 MGI:MGI:2449121 GO:GO:0005524 GO:GO:0007420
GO:GO:0046872 GO:GO:0007368 GO:GO:0042073 GO:GO:0060972
GO:GO:0003351 InterPro:IPR006602 SMART:SM00676 PROSITE:PS51336
GO:GO:0060830 GO:GO:0006183 GO:GO:0004550 eggNOG:COG0105
GO:GO:0006241 GO:GO:0006228 Gene3D:3.30.70.141 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 HOGENOM:HOG000224566
HOVERGEN:HBG006457 OrthoDB:EOG4JHCFT ChiTaRS:NME7 EMBL:AF202048
IPI:IPI00135143 UniGene:Mm.219428 ProteinModelPortal:Q9QXL8
SMR:Q9QXL8 STRING:Q9QXL8 PhosphoSite:Q9QXL8
REPRODUCTION-2DPAGE:Q9QXL8 PaxDb:Q9QXL8 PRIDE:Q9QXL8
InParanoid:Q9QXL8 Genevestigator:Q9QXL8
GermOnline:ENSMUSG00000026575 Uniprot:Q9QXL8
Length = 395
Score = 140 (54.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 44/150 (29%), Positives = 70/150 (46%)
Query: 411 GNDYK-RYLEKYFYRTFSLI--DALEKNIVGEIYNRYEKIGLKIIAAYMKKLSKNDVEKF 467
G+ Y R L +T +LI DA+ K GEI K G I M L++ + F
Sbjct: 98 GDQYTARQLGSRKEKTLALIKPDAVSK--AGEIIEMINKSGFTITKLRMMTLTRKEAADF 155
Query: 468 YSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKA---AKGTIRADF 524
+ H +RPF+ L+ F+ SGPV + +DAI + + L+G + + A G+IRA F
Sbjct: 156 HVDHHSRPFYNELIQFITSGPVIAMEILRDDAICEWKRLLGPANSGLSRTDAPGSIRALF 215
Query: 525 AESIDKNIVHELGEMPFRAKQLQKWIHKFG 554
+N H A++++ + G
Sbjct: 216 GTDGVRNAAHGPDTFASAAREMELFFPSSG 245
>UNIPROTKB|A5D7V9 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9913 "Bos taurus" [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006427
"histidyl-tRNA aminoacylation" evidence=IEA] InterPro:IPR004516
InterPro:IPR006195 InterPro:IPR015807 PIRSF:PIRSF001549
PROSITE:PS50862 InterPro:IPR004154 GO:GO:0005524 GO:GO:0005759
SUPFAM:SSF52954 Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476
eggNOG:COG0124 KO:K01892 GO:GO:0004821 GO:GO:0006427
TIGRFAMs:TIGR00442 HOGENOM:HOG000018075 HOVERGEN:HBG002731
OrthoDB:EOG4D26PM EMBL:BC140699 IPI:IPI00852471
RefSeq:NP_001091602.1 UniGene:Bt.28199 STRING:A5D7V9 PRIDE:A5D7V9
GeneID:615182 KEGG:bta:615182 CTD:23438 InParanoid:A5D7V9
NextBio:20899487 Uniprot:A5D7V9
Length = 506
Score = 96 (38.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 1062 ISYKINTKLVRGMDYYNRTVFE--------WTTDKLGSQNSICGGGRYDFLIKKFSNKF- 1112
+S+ ++ L RG+DYY ++E ++ + S+ GGRYD L+ F +
Sbjct: 319 VSFDLS--LARGLDYYTGVIYEAVLLQTPVHAEEEPLNMGSVAAGGRYDGLVGMFDPRGH 376
Query: 1113 -VPASGFAIGIERLIELIKK 1131
VP G +IG+ER+ ++++
Sbjct: 377 KVPCVGLSIGVERIFSIVEQ 396
Score = 96 (38.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 37/114 (32%), Positives = 59/114 (51%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE++ ++ Y D+ G+ LSLR + T R + N + KR ++ G ++R E
Sbjct: 109 GEDSGLI----YDLKDQ-GGELLSLRYDLTVPFARYLAMNKV--KKMKR-YHVGKVWRRE 160
Query: 928 RPQY--GRYRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
P GRYR+FYQ + G P I DAE + IMC L L+L + ++++
Sbjct: 161 SPTIVQGRYREFYQCDFDIAGQFDPMIPDAECLKIMCEIL-SGLHLGDFLIKVS 213
>UNIPROTKB|F1N0T6 [details] [associations]
symbol:HARS2 "Probable histidine--tRNA ligase,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006427 "histidyl-tRNA
aminoacylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004821 "histidine-tRNA ligase activity"
evidence=IEA] InterPro:IPR004516 InterPro:IPR006195
InterPro:IPR015807 PIRSF:PIRSF001549 PROSITE:PS50862
InterPro:IPR004154 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF52954
Gene3D:3.40.50.800 Pfam:PF03129 PANTHER:PTHR11476 OMA:NKIKRAC
GO:GO:0004821 GO:GO:0006427 TIGRFAMs:TIGR00442
GeneTree:ENSGT00390000005922 IPI:IPI00852471 UniGene:Bt.28199
EMBL:DAAA02020432 Ensembl:ENSBTAT00000035338 Uniprot:F1N0T6
Length = 506
Score = 96 (38.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 1062 ISYKINTKLVRGMDYYNRTVFE--------WTTDKLGSQNSICGGGRYDFLIKKFSNKF- 1112
+S+ ++ L RG+DYY ++E ++ + S+ GGRYD L+ F +
Sbjct: 319 VSFDLS--LARGLDYYTGVIYEAVLLQTPVHAEEEPLNMGSVAAGGRYDGLVGMFDPRGH 376
Query: 1113 -VPASGFAIGIERLIELIKK 1131
VP G +IG+ER+ ++++
Sbjct: 377 KVPCVGLSIGVERIFSIVEQ 396
Score = 96 (38.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 37/114 (32%), Positives = 59/114 (51%)
Query: 868 GEETDIVKKEMYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHE 927
GE++ ++ Y D+ G+ LSLR + T R + N + KR ++ G ++R E
Sbjct: 109 GEDSGLI----YDLKDQ-GGELLSLRYDLTVPFARYLAMNKV--KKMKR-YHVGKVWRRE 160
Query: 928 RPQY--GRYRQFYQIGVEAIGFPGPDI-DAELI-IMCSRLWKNLNLKNICLELN 977
P GRYR+FYQ + G P I DAE + IMC L L+L + ++++
Sbjct: 161 SPTIVQGRYREFYQCDFDIAGQFDPMIPDAECLKIMCEIL-SGLHLGDFLIKVS 213
>FB|FBgn0030573 [details] [associations]
symbol:nmdyn-D6 "nmdyn-D6" species:7227 "Drosophila
melanogaster" [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0006183 "GTP biosynthetic
process" evidence=IEA] [GO:0006165 "nucleoside diphosphate
phosphorylation" evidence=IEA] InterPro:IPR001564 Pfam:PF00334
PRINTS:PR01243 SMART:SM00562 GO:GO:0005524 EMBL:AE014298
GO:GO:0006183 GO:GO:0004550 KO:K00940 GO:GO:0006241 GO:GO:0006228
Gene3D:3.30.70.141 InterPro:IPR023005 PANTHER:PTHR11349
SUPFAM:SSF54919 PROSITE:PS00469 GeneTree:ENSGT00700000104244
OMA:NILAHEN HSSP:P71904 EMBL:AF241151 EMBL:AF241152 EMBL:BT029417
RefSeq:NP_572965.1 UniGene:Dm.3287 SMR:Q9VY27 STRING:Q9VY27
EnsemblMetazoa:FBtr0073933 GeneID:32396 KEGG:dme:Dmel_CG5310
UCSC:CG5310-RA CTD:32396 FlyBase:FBgn0030573 InParanoid:Q9VY27
OrthoDB:EOG4866VS GenomeRNAi:32396 NextBio:778251 Uniprot:Q9VY27
Length = 151
Score = 118 (46.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 459 LSKNDVEKFYSIHKNRPFFKNLVNFMISGPVFIQVLEGEDAIKKHRILIGDTDPIKAA-- 516
++K E+FY+ HK + F+ L +FM SGP + +L+ E I+K R L+G T +A
Sbjct: 40 ITKELSERFYAEHKGKFFYHRLTSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYS 99
Query: 517 -KGTIRADFAESIDKNIVH 534
IRA + S +N H
Sbjct: 100 DPNCIRALYGISDTRNACH 118
>UNIPROTKB|P0A562 [details] [associations]
symbol:era "GTPase Era" species:1773 "Mycobacterium
tuberculosis" [GO:0005829 "cytosol" evidence=IDA] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0042254 EMBL:BX842579 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 HOGENOM:HOG000245596 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ PIR:C70586 RefSeq:NP_336913.1
RefSeq:YP_006515798.1 RefSeq:YP_177873.1 ProteinModelPortal:P0A562
SMR:P0A562 EnsemblBacteria:EBMYCT00000003963
EnsemblBacteria:EBMYCT00000070369 GeneID:13319070 GeneID:886027
GeneID:925918 KEGG:mtc:MT2433 KEGG:mtu:Rv2364c KEGG:mtv:RVBD_2364c
PATRIC:18127100 TubercuList:Rv2364c Uniprot:P0A562
Length = 300
Score = 137 (53.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 40/123 (32%), Positives = 63/123 (51%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V +VG+PN GKSTL N+L+G IT P TTR +I+ + ++ + IL+DT G+ R
Sbjct: 9 VCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPGLHRPR 68
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG---RSLIVCVN 301
V +T ++ +V+ L + A + I D I + +G +L+V V
Sbjct: 69 TLLGKRLNDLVRETYAAV---DVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVVIVT 125
Query: 302 KWD 304
K D
Sbjct: 126 KID 128
WARNING: HSPs involving 35 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1250 1186 0.00096 123 3 11 22 0.36 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 285
No. of states in DFA: 621 (66 KB)
Total size of DFA: 513 KB (2236 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 100.43u 0.16s 100.59t Elapsed: 00:00:07
Total cpu time: 100.47u 0.16s 100.63t Elapsed: 00:00:07
Start: Thu Aug 15 11:49:56 2013 End: Thu Aug 15 11:50:03 2013
WARNINGS ISSUED: 2