RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17092
(183 letters)
>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c
{Streptococcus mutans [TaxId: 1309]}
Length = 253
Score = 53.9 bits (128), Expect = 9e-10
Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 8 GLIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPTVFVTNAGNSLAADKAKQLTEW 67
G + D+DG + +GK +P +D F+ +L + + VTN + L
Sbjct: 4 GYLIDLDGTIYKGKDRIPAGED-FVKRLQERQLPY----ILVTNNTTRTPEMVQEMLATS 58
Query: 68 LGVEVEEDQVVMSHTPIKML--HKYHTKHTLISGQGPMEEIAKRLGFN 113
++ + + + K + G+ +++ G+
Sbjct: 59 FNIKTPLETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEAGYR 106
>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188
{Enterococcus faecalis [TaxId: 1351]}
Length = 253
Score = 51.6 bits (122), Expect = 5e-09
Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 8 GLIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPTVFVTNAGNSLAADKAKQLTEW 67
G + D+DG + GK+ +P + F+ +L F +FVTN A++L
Sbjct: 4 GYLIDLDGTIYLGKEPIPAGKR-FVERLQEKDLPF----LFVTNNTTKSPETVAQRLANE 58
Query: 68 LGVEVEEDQVVMSHTPIKML--HKYHTKHTLISGQGPMEEIAKRLGFNKV 115
+ V V + K + G+ + ++ GF
Sbjct: 59 FDIHVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWD 108
>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}
Length = 250
Score = 51.6 bits (122), Expect = 6e-09
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 8 GLIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPTVFVTNAGNSLAADKAKQLTEW 67
+I DIDGVL+ +PG + F++ + + G V +TN S
Sbjct: 5 NVICDIDGVLMHDNVAVPGAAE-FLHGIMDKGLPL----VLLTNYP-SQTGQDLANRFAT 58
Query: 68 LGVEVEEDQVVMSHTPIK-MLHKYHTKHTLISGQGPMEE 105
GV+V + S L + K + G+G +
Sbjct: 59 AGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIH 97
>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga
maritima [TaxId: 2336]}
Length = 261
Score = 51.2 bits (121), Expect = 8e-09
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 8 GLIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPTVFVTNAGNSLAADKAKQLTEW 67
I D+DG +LPG + F+ L RF VF TN SL A +
Sbjct: 9 LFILDMDGTFYLDDSLLPGSLE-FLETLKEKNKRF----VFFTNNS-SLGAQDYVRKLRN 62
Query: 68 LGVEVEEDQVVMSHTPIKMLHKYHTKHTLISGQGPMEEIAKRLGFNKVVT 117
+GV+V +D VV S I G + + V+
Sbjct: 63 MGVDVPDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVID 112
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 244
Score = 28.9 bits (63), Expect = 0.28
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 9 LIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVV 44
+FD+DG L +Q + F+ KL + VV
Sbjct: 4 CLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVV 39
>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 243
Score = 28.5 bits (62), Expect = 0.42
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 9 LIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVV 44
+FD+DG L +Q + D F+ KL VV
Sbjct: 6 CLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVV 41
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia
coli [TaxId: 562]}
Length = 271
Score = 28.0 bits (61), Expect = 0.55
Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 8/83 (9%)
Query: 9 LIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPTVFVTNAGNSLAADKAKQLTEWL 68
+ D+DG L+ + + G V+ T G A + L
Sbjct: 7 IAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTT------GRPYAG--VHNYLKEL 58
Query: 69 GVEVEEDQVVMSHTPIKMLHKYH 91
+E D + + +
Sbjct: 59 HMEQPGDYCITYNGALVQKAADG 81
>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 122
Score = 27.1 bits (60), Expect = 0.71
Identities = 12/98 (12%), Positives = 27/98 (27%), Gaps = 21/98 (21%)
Query: 9 LIFDIDGVLVRGK-----QVLPGVQDTFMNKLTNSGGRFVVPTVFVTNAGNSLAADKAKQ 63
+ D DG +V + + +P + + L R + + L + +
Sbjct: 3 IAVDFDGTIVEHRYPRIGEEIPFAVE-TLKLLQQEKHRL----ILWSVREGELLDEAIEW 57
Query: 64 LTEWLGVEVEEDQVVMSHTPIKMLHKYHTK-HTLISGQ 100
G+E + + H S +
Sbjct: 58 CRAR-GLEFYA---------ANKDYPEEERDHQGFSRK 85
>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme,
N-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Length = 313
Score = 28.0 bits (62), Expect = 0.74
Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 10/121 (8%)
Query: 5 PSFGLIFDIDGVLVRGKQVL-PGVQDTFMNKLTNSGGRFVVPTV-FVTNA----GNSLAA 58
P FG + DI G L+ G G F + L++ G R ++A G + A
Sbjct: 143 PGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTA 202
Query: 59 D-KAKQLTEWLGVEVEEDQVVMSHTPIKMLHKYHTKHTLISGQGP---MEEIAKRLGFNK 114
+ + + V+ + V P K Y G P + +A+R G +
Sbjct: 203 GLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSA 262
Query: 115 V 115
V
Sbjct: 263 V 263
>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus
lactis [TaxId: 1358]}
Length = 221
Score = 27.1 bits (58), Expect = 1.2
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 8 GLIFDIDGVLV 18
++FD+DGV+
Sbjct: 4 AVLFDLDGVIT 14
>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 222
Score = 26.7 bits (57), Expect = 1.4
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 9 LIFDIDGVLV 18
+IFD DGVLV
Sbjct: 5 IIFDCDGVLV 14
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 26.7 bits (57), Expect = 1.4
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 9 LIFDIDGVLV 18
I+D+DG L+
Sbjct: 4 FIWDLDGTLL 13
>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase
{Lactobacillus plantarum [TaxId: 1590]}
Length = 207
Score = 26.8 bits (57), Expect = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 8 GLIFDIDGVLV 18
L+FDIDG L
Sbjct: 5 ALMFDIDGTLT 15
>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 187
Score = 26.2 bits (56), Expect = 1.9
Identities = 4/11 (36%), Positives = 7/11 (63%)
Query: 8 GLIFDIDGVLV 18
I+D+ G L+
Sbjct: 5 DYIWDLGGTLL 15
>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus
influenzae, HI1679 [TaxId: 727]}
Length = 177
Score = 26.2 bits (57), Expect = 2.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 9 LIFDIDGVLVRGK 21
+I D+DGVL G+
Sbjct: 8 VITDVDGVLTDGQ 20
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Length = 232
Score = 26.2 bits (56), Expect = 2.1
Identities = 5/38 (13%), Positives = 15/38 (39%)
Query: 9 LIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPT 46
+ D+DG L+ ++ +L + ++ +
Sbjct: 7 VFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCS 44
>d1k20a_ c.107.1.1 (A:) Manganese-dependent inorganic
pyrophosphatase (family II) {Streptococcus gordonii
[TaxId: 1302]}
Length = 310
Score = 26.5 bits (58), Expect = 2.2
Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 1 EILSPSFGL-----IFDIDGVLVRGKQVLPGVQDTF 31
+ + +F + G + R KQV+P + ++F
Sbjct: 273 DKVEAAFNFVLENNHAFLAGAVSRKKQVVPQLTESF 308
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus
subtilis [TaxId: 1423]}
Length = 285
Score = 26.4 bits (57), Expect = 2.2
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 9 LIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPT 46
+ D+DG L+ K + + + + G VV T
Sbjct: 4 IAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVST 41
>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId:
562]}
Length = 218
Score = 26.3 bits (56), Expect = 2.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 9 LIFDIDGVLV 18
IFD+DG+L+
Sbjct: 6 AIFDMDGLLI 15
>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus
cereus [TaxId: 1396]}
Length = 257
Score = 25.9 bits (55), Expect = 2.7
Identities = 4/11 (36%), Positives = 5/11 (45%)
Query: 8 GLIFDIDGVLV 18
+IF G V
Sbjct: 4 AVIFAWAGTTV 14
>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX
{Escherichia coli [TaxId: 562]}
Length = 197
Score = 25.9 bits (55), Expect = 2.7
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 10 IFDIDGVLV 18
IFD+ V+V
Sbjct: 4 IFDLGNVIV 12
>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 210
Score = 26.0 bits (55), Expect = 3.1
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 8 GLIFDIDGVLV 18
+ FD+DG LV
Sbjct: 6 AIFFDLDGTLV 16
>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 225
Score = 25.9 bits (55), Expect = 3.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 8 GLIFDIDGVLV 18
+FD+DGVL
Sbjct: 4 AAVFDLDGVLA 14
>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph
{Haemophilus somnus [TaxId: 731]}
Length = 224
Score = 25.6 bits (54), Expect = 3.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 9 LIFDIDGVLV 18
+ FD+DG LV
Sbjct: 7 IGFDLDGTLV 16
>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD
{Pseudomonas sp., strain YL [TaxId: 306]}
Length = 220
Score = 25.6 bits (54), Expect = 3.5
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 8 GLIFDIDGVLV 18
G+ FD+ G L
Sbjct: 4 GIAFDLYGTLF 14
>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD
{Xanthobacter autotrophicus [TaxId: 280]}
Length = 245
Score = 25.5 bits (54), Expect = 3.7
Identities = 4/11 (36%), Positives = 6/11 (54%)
Query: 8 GLIFDIDGVLV 18
++FD G L
Sbjct: 4 AVVFDAYGTLF 14
>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 25.6 bits (54), Expect = 3.7
Identities = 4/11 (36%), Positives = 6/11 (54%)
Query: 8 GLIFDIDGVLV 18
+ FD G L+
Sbjct: 4 AVFFDFVGTLL 14
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 25.4 bits (54), Expect = 3.8
Identities = 6/38 (15%), Positives = 16/38 (42%)
Query: 9 LIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPT 46
+ DIDG + +++ + + + G ++ T
Sbjct: 5 ISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVT 42
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 260
Score = 25.7 bits (55), Expect = 3.9
Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 11/89 (12%)
Query: 9 LIFDIDGVLVR--GKQVLPGVQDTFMNKLTNSGGRFVVPTVFVTNAGNSLAADKAKQLTE 66
L FDIDG LV ++ + G + + T G A L+E
Sbjct: 4 LFFDIDGTLVSFETHRIPSSTIEAL-EAAHAKGLKIFIAT------GRPKAI--INNLSE 54
Query: 67 WLGVEVEEDQVVMSHTPIKMLHKYHTKHT 95
+ + + M+ + + K
Sbjct: 55 LQDRNLIDGYITMNGAYCFVGEEVIYKSA 83
>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708
{Chlorobium tepidum [TaxId: 1097]}
Length = 228
Score = 25.5 bits (54), Expect = 4.1
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 9 LIFDIDGVLV 18
++FDIDG L+
Sbjct: 5 VLFDIDGTLL 14
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 302
Score = 25.4 bits (54), Expect = 4.1
Identities = 8/73 (10%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Query: 49 VTNAGNSLAADKAKQLTEWL---GVEVEEDQVVMSHTPIKMLHKYHTKHTLISGQGPMEE 105
V + G A + A+++ + L + + L + + + +
Sbjct: 6 VVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDAD 65
Query: 106 IAKRLGFNKVVTV 118
G V+ +
Sbjct: 66 QHAADGCELVLVL 78
>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 225
Score = 25.3 bits (54), Expect = 4.3
Identities = 5/38 (13%), Positives = 12/38 (31%)
Query: 9 LIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPT 46
D+DG L +++ + G + +
Sbjct: 6 AAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLS 43
>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 247
Score = 25.2 bits (53), Expect = 4.5
Identities = 4/11 (36%), Positives = 7/11 (63%)
Query: 8 GLIFDIDGVLV 18
+ FD+D L+
Sbjct: 8 AVFFDLDNTLI 18
>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 222
Score = 25.1 bits (53), Expect = 4.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 9 LIFDIDGVLV 18
FD+DGVL
Sbjct: 3 AAFDLDGVLA 12
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase
domain {Bacteriophage T4 [TaxId: 10665]}
Length = 149
Score = 24.3 bits (52), Expect = 7.0
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 14/50 (28%)
Query: 10 IFDIDGVLVRGK-------------QVLPGVQDTFMNKLTNSGGRFVVPT 46
IFD+DG L + + P V + G + VV +
Sbjct: 11 IFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVE-LSKMYALMGYQIVVVS 59
>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 244
Score = 24.2 bits (51), Expect = 9.4
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 10/102 (9%)
Query: 9 LIFDIDGVLVRGKQVLPGVQDTFMNKLTNSGGRFVVPTVFVTNAGNSLAADKAKQLTEWL 68
LI D+D V +Q L +Q+ T G S + A++L + +
Sbjct: 6 LISDLDNTWVGDQQALEHLQE--YLGDRRGNFYLAYAT------GRSYHS--ARELQKQV 55
Query: 69 GVEVEEDQVVMSHTPIKMLHKYHTKHTLISGQGPMEEIAKRL 110
G+ + + + I + +I + +
Sbjct: 56 GLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAI 97
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.388
Gapped
Lambda K H
0.267 0.0452 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 637,898
Number of extensions: 27322
Number of successful extensions: 136
Number of sequences better than 10.0: 1
Number of HSP's gapped: 134
Number of HSP's successfully gapped: 36
Length of query: 183
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 103
Effective length of database: 1,309,196
Effective search space: 134847188
Effective search space used: 134847188
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.7 bits)