Query psy17095
Match_columns 275
No_of_seqs 148 out of 575
Neff 4.0
Searched_HMMs 46136
Date Fri Aug 16 21:45:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17095.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17095hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3913|consensus 100.0 2.4E-52 5.3E-57 396.0 13.0 145 33-192 44-188 (356)
2 smart00097 WNT1 found in Wnt-1 100.0 1.8E-47 3.8E-52 357.2 13.5 132 40-186 2-133 (305)
3 PF00110 wnt: wnt family; Int 100.0 5.7E-48 1.2E-52 360.3 6.9 137 36-187 1-138 (310)
4 KOG4364|consensus 92.6 1.7 3.8E-05 46.1 12.3 20 53-72 155-174 (811)
5 KOG2572|consensus 81.9 0.52 1.1E-05 47.4 0.5 22 30-51 249-270 (498)
6 KOG2572|consensus 74.6 1.2 2.5E-05 45.0 0.6 11 75-85 207-217 (498)
7 PF07946 DUF1682: Protein of u 59.4 56 0.0012 31.2 8.5 15 71-85 135-149 (321)
8 KOG3925|consensus 50.2 30 0.00066 34.5 5.1 11 264-274 57-67 (371)
9 PF07946 DUF1682: Protein of u 49.8 77 0.0017 30.3 7.7 14 122-135 174-187 (321)
10 PTZ00266 NIMA-related protein 39.3 4.9E+02 0.011 29.5 12.7 9 171-179 426-434 (1021)
11 PF08688 ASD1: Apx/Shroom doma 34.5 54 0.0012 29.7 3.9 27 35-62 123-149 (182)
12 PLN02277 H(+) -translocating i 34.3 37 0.00081 36.6 3.3 25 56-80 560-584 (730)
13 TIGR01104 V_PPase vacuolar-typ 33.7 38 0.00083 36.4 3.2 25 56-80 528-552 (697)
14 KOG2505|consensus 32.6 89 0.0019 32.8 5.5 47 122-170 427-476 (591)
15 KOG1029|consensus 30.0 7.3E+02 0.016 28.0 11.8 6 81-86 235-240 (1118)
16 PLN02255 H(+) -translocating i 27.7 53 0.0011 35.7 3.1 25 56-80 591-615 (765)
17 PF03030 H_PPase: Inorganic H+ 27.7 54 0.0012 35.2 3.1 25 56-80 528-552 (682)
18 PRK00733 hppA membrane-bound p 27.6 58 0.0013 34.9 3.3 25 56-80 503-527 (666)
19 KOG2412|consensus 27.3 3.4E+02 0.0073 28.9 8.6 9 57-65 51-59 (591)
20 KOG2573|consensus 27.2 10 0.00022 38.6 -2.1 17 129-145 370-386 (498)
21 PF12132 DUF3587: Protein of u 22.9 1.1E+02 0.0024 28.1 3.8 45 104-148 96-140 (199)
22 KOG0112|consensus 22.1 75 0.0016 35.3 2.9 19 4-22 424-442 (975)
23 PRK13687 hypothetical protein; 20.8 14 0.0003 29.8 -2.1 47 114-169 4-50 (85)
24 KOG2412|consensus 20.4 9.8E+02 0.021 25.6 10.3 7 69-75 70-76 (591)
No 1
>KOG3913|consensus
Probab=100.00 E-value=2.4e-52 Score=396.03 Aligned_cols=145 Identities=43% Similarity=0.786 Sum_probs=134.6
Q ss_pred hhhhccCCCCCCHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhccCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q psy17095 33 SARVCSRVPGLSFGQVRQCSLFADHMASVGRGAAESIAECQHQFRHHRWNCSSGGPGAGGGGGGKSESTTAPSVLPPTLH 112 (275)
Q Consensus 33 ~~~iC~~l~GLs~rQ~~LCr~~p~lm~sV~~GaklAI~ECQ~QFr~~RWNCSs~~~~~~~~~~~k~~~~~~~~~fg~iL~ 112 (275)
...+|..++||+++|+++|++||++|++|++|+++||+|||||||++|||||+. +..++|+++|.
T Consensus 44 ~~~~C~~l~gL~~~Q~~~Cr~~p~~~~sv~~G~~~~i~ECq~QFr~~RWNCs~~---------------~~~~~~g~~l~ 108 (356)
T KOG3913|consen 44 AKPLCDNLPGLSPRQRRLCRRNPDVMPSVAEGAREGIQECQFQFRFRRWNCSTL---------------DQLPVFGPLLS 108 (356)
T ss_pred cccchhhccccCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHhhccCCCCC---------------ccccccchhhc
Confidence 345899999999999999999999999999999999999999999999999988 56789999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhhhcCCCCCCccCcCCCCCCCCCCCcccCCCCcchhhhhhhhhhhhhhhHHhHHHHhh
Q psy17095 113 IGSREAAFTHAIATAGVVYAVARSCKDGSLPSCGCSRTARPKDLKREWLWGGCGDNLEYGYKGGKKERRKQRRRKRKRKR 192 (275)
Q Consensus 113 ~GTREtAFV~AItSAGVv~aVTRACS~G~L~~CgCd~~~~~~~~~~~w~WGGCSDNI~fG~~fSr~FlDa~er~~~~r~~ 192 (275)
.|+||+||||||+||||+|+|||||+.|.|..||||....+...+++|+||||||||.||+.||+.|||+++++++=|..
T Consensus 109 ~g~REsAFv~AIssAgV~havtraCs~G~l~~CgCd~~~~~~~~~~~w~WGGCsDnv~fG~~fsr~FlD~re~~~d~r~l 188 (356)
T KOG3913|consen 109 RGTRETAFVYAISSAGVAHAVTRACSQGNLESCGCDPSPNGKSGPEGWEWGGCSDNVDFGIRFSRKFLDAREKRKDARAL 188 (356)
T ss_pred ccchHHHHHHHHHHhHHHHHHHHHhcCCCCCCcCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhccccccccCHHHH
Confidence 99999999999999999999999999999999999987766556677999999999999999999999999887655543
No 2
>smart00097 WNT1 found in Wnt-1.
Probab=100.00 E-value=1.8e-47 Score=357.19 Aligned_cols=132 Identities=46% Similarity=0.833 Sum_probs=121.6
Q ss_pred CCCCCHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhccCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCchhH
Q psy17095 40 VPGLSFGQVRQCSLFADHMASVGRGAAESIAECQHQFRHHRWNCSSGGPGAGGGGGGKSESTTAPSVLPPTLHIGSREAA 119 (275)
Q Consensus 40 l~GLs~rQ~~LCr~~p~lm~sV~~GaklAI~ECQ~QFr~~RWNCSs~~~~~~~~~~~k~~~~~~~~~fg~iL~~GTREtA 119 (275)
++||++.|+++|+.+|++|++|++|+++||+|||+||+++|||||++ +..++|+++|..||||+|
T Consensus 2 ~~~l~~~Q~~~C~~~~~~~~~v~~g~~~ai~ECq~QF~~~rWNCs~~---------------~~~~~~~~~l~~~trEtA 66 (305)
T smart00097 2 LPGLSRRQRRLCRANPDVMISVAEGAQEGIEECQHQFRFRRWNCSTL---------------DNASVFGKVLRQGTRETA 66 (305)
T ss_pred CcccCHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC---------------cCCcccccccccccchHH
Confidence 67999999999999999999999999999999999999999999987 445789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCccCcCCCCCCCCCCCcccCCCCcchhhhhhhhhhhhhhhHHh
Q psy17095 120 FTHAIATAGVVYAVARSCKDGSLPSCGCSRTARPKDLKREWLWGGCGDNLEYGYKGGKKERRKQRRR 186 (275)
Q Consensus 120 FV~AItSAGVv~aVTRACS~G~L~~CgCd~~~~~~~~~~~w~WGGCSDNI~fG~~fSr~FlDa~er~ 186 (275)
|||||+||||+|+||+||+.|.|.+||||...++.....+|+||||||||.||+.||+.|||+.+..
T Consensus 67 fv~Ai~sAgv~~~itraCs~G~l~~C~Cd~~~~~~~~~~~w~WgGCsdnv~~G~~~s~~FlD~~~~~ 133 (305)
T smart00097 67 FVYAISSAGVAHAVTRACSEGELDSCGCDYRKRGRAGGRGWKWGGCSDNIDFGIRFSREFVDARERG 133 (305)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999987654333357999999999999999999999987653
No 3
>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development. The name derives from the first 2 members of the family to be discovered: int-1 (mouse) and wingless (Drosophila) []. It is now recognised that Wnt signalling controls many cell fate decisions in a variety of different organisms, including mammals []. Wnt signalling has been implicated in tumourigenesis, early mesodermal patterning of the embryo, morphogenesis of the brain and kidneys, regulation of mammary gland proliferation and Alzheimer's disease [, ]. Wnt-mediated signalling is believed to proceed initially through binding to cell surface receptors of the frizzled family; the signal is subsequently transduced through several cytoplasmic components to B-catenin, which enters the nucleus and activates the transcription of several genes important in development []. Several non-canonical Wnt signalling pathways have also been elucidated that act independently of B-catenin. Canonical and noncanonical Wnt signaling branches are highly interconnected, and cross-regulate each other []. Members of the Wnt gene family are defined by their sequence similarity to mouse Wnt-1 and Wingless in Drosophila. They encode proteins of ~350-400 residues in length, with orthologues identified in several, mostly vertebrate, species. Very little is known about the structure of Wnts as they are notoriously insoluble, but they share the following features characteristics of secretory proteins: a signal peptide, several potential N-glycosylation sites and 22 conserved cysteines [] that are probably involved in disulphide bonds. The Wnt proteins seem to adhere to the plasma membrane of the secreting cells and are therefore likely to signal over only few cell diameters. Fifteen major Wnt gene families have been identified in vertebrates, with multiple subtypes within some classes. In humans, 19 Wnt proteins have been identified that share 27% to 83% amino-acid sequence identity and a conserved pattern of 23 or 24 cysteine residues []. Wnt genes are highly conserved between vertebrate species sharing overall sequence identity and gene structure, and are slightly less conserved between vertebrates and invertebrates.; GO: 0005102 receptor binding, 0007275 multicellular organismal development, 0016055 Wnt receptor signaling pathway, 0005576 extracellular region; PDB: 4F0A_B.
Probab=100.00 E-value=5.7e-48 Score=360.30 Aligned_cols=137 Identities=42% Similarity=0.855 Sum_probs=87.5
Q ss_pred hccCCCCCCHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhccCcccCCCCCCCCCCCCCCCCCCCCCCCCCCc-ccccC
Q psy17095 36 VCSRVPGLSFGQVRQCSLFADHMASVGRGAAESIAECQHQFRHHRWNCSSGGPGAGGGGGGKSESTTAPSVLPP-TLHIG 114 (275)
Q Consensus 36 iC~~l~GLs~rQ~~LCr~~p~lm~sV~~GaklAI~ECQ~QFr~~RWNCSs~~~~~~~~~~~k~~~~~~~~~fg~-iL~~G 114 (275)
||..++||+++|++||++||++|++|++|+++||+|||+||+++|||||++ +..++|++ +|..|
T Consensus 1 iC~~~~gL~~~Q~~~C~~~p~~m~~i~~G~~~ai~ECq~QF~~~RWNCs~~---------------~~~~~f~~~~~~~g 65 (310)
T PF00110_consen 1 ICDKIPGLTKRQRRLCRRNPDLMPSIAEGAKMAIEECQHQFRNRRWNCSTV---------------DNNPVFGPPILKKG 65 (310)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHHHHTTTSSS--------------------T-THHHH-TT--S-
T ss_pred CCcccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC---------------cccccccccccccC
Confidence 799999999999999999999999999999999999999999999999988 44467877 99999
Q ss_pred CchhHHHHHHHHHHHHHHHHhhhcCCCCCCccCcCCCCCCCCCCCcccCCCCcchhhhhhhhhhhhhhhHHhH
Q psy17095 115 SREAAFTHAIATAGVVYAVARSCKDGSLPSCGCSRTARPKDLKREWLWGGCGDNLEYGYKGGKKERRKQRRRK 187 (275)
Q Consensus 115 TREtAFV~AItSAGVv~aVTRACS~G~L~~CgCd~~~~~~~~~~~w~WGGCSDNI~fG~~fSr~FlDa~er~~ 187 (275)
|||+||||||+||||+|+||+||+.|.|..|+|+....+...+..|.||||+|||.||+.||+.|||+.+...
T Consensus 66 trE~Afv~Ai~sAgv~~~itraCs~G~l~~C~C~~~~~~~~~~~~~~wggCsdni~~G~~~sr~Fld~~~~~~ 138 (310)
T PF00110_consen 66 TRETAFVYAISSAGVAHSITRACSRGKLKSCGCDRNPRGSSSQNTWQWGGCSDNIKFGIKFSRRFLDAREKGS 138 (310)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTTT-SS-----TTTTSEEETTEEE-S----HHHHHHHHHHHHHHH--SS
T ss_pred cccceeeEhhhcCchHHHHHHHhhcccCCcCCCcccccccccccccccCCcccccccchHHHHHHHHhhhhhh
Confidence 9999999999999999999999999999999999888764455569999999999999999999999998433
No 4
>KOG4364|consensus
Probab=92.63 E-value=1.7 Score=46.09 Aligned_cols=20 Identities=20% Similarity=0.014 Sum_probs=11.1
Q ss_pred hhhhHHHHHHHHHHHHHHHH
Q psy17095 53 LFADHMASVGRGAAESIAEC 72 (275)
Q Consensus 53 ~~p~lm~sV~~GaklAI~EC 72 (275)
..+.+|..+..++..-+..|
T Consensus 155 ~~~~~~~~s~~vVl~~~~~~ 174 (811)
T KOG4364|consen 155 RDLKIMPSSVRVVLKLRRTC 174 (811)
T ss_pred cCcccCCCcchhHHhhhhcc
Confidence 34556666666665444444
No 5
>KOG2572|consensus
Probab=81.93 E-value=0.52 Score=47.44 Aligned_cols=22 Identities=18% Similarity=0.181 Sum_probs=12.1
Q ss_pred CcchhhhccCCCCCCHHHHHHh
Q psy17095 30 LEDSARVCSRVPGLSFGQVRQC 51 (275)
Q Consensus 30 ~~~~~~iC~~l~GLs~rQ~~LC 51 (275)
+++...+|+++--|...-.+||
T Consensus 249 l~nI~~l~dqVle~aeyR~qL~ 270 (498)
T KOG2572|consen 249 LLNIKELCDQVLELAEYRDQLI 270 (498)
T ss_pred HHhHHHHHHHHHHHHHHHHHHH
Confidence 4444557777655555444444
No 6
>KOG2572|consensus
Probab=74.63 E-value=1.2 Score=45.03 Aligned_cols=11 Identities=27% Similarity=0.165 Sum_probs=4.6
Q ss_pred hhccCcccCCC
Q psy17095 75 QFRHHRWNCSS 85 (275)
Q Consensus 75 QFr~~RWNCSs 85 (275)
+.-..|=||+.
T Consensus 207 k~mG~r~~~a~ 217 (498)
T KOG2572|consen 207 KAMGVRCNAAS 217 (498)
T ss_pred HHHhHhhhhhc
Confidence 33344444443
No 7
>PF07946 DUF1682: Protein of unknown function (DUF1682); InterPro: IPR012879 The members of this family are all hypothetical eukaryotic proteins of unknown function. One member (Q920S6 from SWISSPROT) is described as being an adipocyte-specific protein, but no evidence of this was found.
Probab=59.42 E-value=56 Score=31.18 Aligned_cols=15 Identities=13% Similarity=0.273 Sum_probs=9.8
Q ss_pred HHHHhhccCcccCCC
Q psy17095 71 ECQHQFRHHRWNCSS 85 (275)
Q Consensus 71 ECQ~QFr~~RWNCSs 85 (275)
.+-.+++..+|.=+.
T Consensus 135 ~~~~~~r~~~~dLs~ 149 (321)
T PF07946_consen 135 KEMKKLRKDNYDLSL 149 (321)
T ss_pred HHHHHHHHhCcchhh
Confidence 355677777886554
No 8
>KOG3925|consensus
Probab=50.18 E-value=30 Score=34.48 Aligned_cols=11 Identities=55% Similarity=0.749 Sum_probs=5.8
Q ss_pred HHhhhhhhccC
Q psy17095 264 EKKKKKDEGRR 274 (275)
Q Consensus 264 ~~~~~~~~~~~ 274 (275)
.++.++|++++
T Consensus 57 ~e~~~~~~~~~ 67 (371)
T KOG3925|consen 57 SEKEKKDESRP 67 (371)
T ss_pred hhhhccCCCCc
Confidence 34455566654
No 9
>PF07946 DUF1682: Protein of unknown function (DUF1682); InterPro: IPR012879 The members of this family are all hypothetical eukaryotic proteins of unknown function. One member (Q920S6 from SWISSPROT) is described as being an adipocyte-specific protein, but no evidence of this was found.
Probab=49.82 E-value=77 Score=30.27 Aligned_cols=14 Identities=21% Similarity=0.294 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHh
Q psy17095 122 HAIATAGVVYAVAR 135 (275)
Q Consensus 122 ~AItSAGVv~aVTR 135 (275)
.+|.+..|+.+|..
T Consensus 174 ~~il~~~~~~~l~~ 187 (321)
T PF07946_consen 174 DFILTPELIKALNK 187 (321)
T ss_pred HHHhChHHHHHHHh
Confidence 45555556666663
No 10
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=39.32 E-value=4.9e+02 Score=29.50 Aligned_cols=9 Identities=33% Similarity=0.519 Sum_probs=4.2
Q ss_pred hhhhhhhhh
Q psy17095 171 YGYKGGKKE 179 (275)
Q Consensus 171 fG~~fSr~F 179 (275)
||..|.+.+
T Consensus 426 ~g~r~eke~ 434 (1021)
T PTZ00266 426 YGGRVDKDH 434 (1021)
T ss_pred cccccchhH
Confidence 444444444
No 11
>PF08688 ASD1: Apx/Shroom domain ASD1; InterPro: IPR014800 Cell shape changes require the coordination of actin and microtubule cytoskeletons. The Shroom family is a small group of related proteins that are defined by sequence similarity and in most cases by some link to the actin cytoskeleton. The Shroom (Shrm) protein family is found only in animals. Proteins of this family are predicted to be utilised in multiple morphogenic and developmental processes across animal phyla to regulate cells shape or intracellular architecture in an actin and myosin-dependent manner []. While the founding member of the Shrm family is Shrm1 (formerly Apx), it appears that this protein is found only in Xenopus []. In mice and humans, the Shrm family of proteins consists of: Shrm2 (formerly Apxl), a protein involved in the morphogenesis, maintenance, and/or function of vascular endothelial cells. Shrm3 (formerly Shroom), a protein necessary for neural tube closure in vertebrate development as deficiency in Shrm results in spina bifida. Shrm3 is also conserved in some invertebrates, as orthologues can be found in sea urchins. Shrm4, a regulator of cyto-skeletal architecture that may play an important role in vertebrate development. It is implicated in X-linked mental retardation in humans. This protein family is based on the conservation of a specific arrangement of an N-terminal PDZ domain, a centrally positioned sequence motif termed ASD1 (Apx/Shrm Domain 1) and a C-terminal motif termed ASD2 [, , ]. Shrm2 and Shrm3 contain all three domains, while Shrm4 contains the PDZ and ASD2 domains, but lacks a discernible ASD1 element. To date, the ASD1 and ASD2 elements have only been found in Shrm-related proteins and do not appear in combination with other conserved domains. ASD1 is required for targeting actin, while ASD2 is capable of eliciting an actomyosin based constriction event [, ]. ASD2 is the most highly conserved sequence element shared by Shrm1, Shrm2, Shrm3, and Shrm4. It possesses a well conserved series of leucine residues that exhibit spacing consistent with that of a leucine zipper motif []. This region is found in the actin binding protein Shroom. ASD1 has been implicated directly in F-actin binding.
Probab=34.48 E-value=54 Score=29.70 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=22.8
Q ss_pred hhccCCCCCCHHHHHHhhhhhhHHHHHH
Q psy17095 35 RVCSRVPGLSFGQVRQCSLFADHMASVG 62 (275)
Q Consensus 35 ~iC~~l~GLs~rQ~~LCr~~p~lm~sV~ 62 (275)
.||..- -||..|+..|...|+=|+-|+
T Consensus 123 RiGgRk-RlTaEQKkrSYSEPEKmneVG 149 (182)
T PF08688_consen 123 RIGGRK-RLTAEQKKRSYSEPEKMNEVG 149 (182)
T ss_pred cccccc-cCCHHHhhhccCCchhhhhcc
Confidence 366543 499999999999999999987
No 12
>PLN02277 H(+) -translocating inorganic pyrophosphatase
Probab=34.31 E-value=37 Score=36.63 Aligned_cols=25 Identities=36% Similarity=0.437 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCc
Q psy17095 56 DHMASVGRGAAESIAECQHQFRHHR 80 (275)
Q Consensus 56 ~lm~sV~~GaklAI~ECQ~QFr~~R 80 (275)
-.|.+|.+++...++||++|||...
T Consensus 560 l~m~AVg~aA~~mVeEVRRQFreip 584 (730)
T PLN02277 560 WACAAVGRTAQEVVNEVRRQFAERP 584 (730)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3589999999999999999999763
No 13
>TIGR01104 V_PPase vacuolar-type H(+)-translocating pyrophosphatase. This model describes proton pyrophosphatases from eukaryotes (predominantly plants), archaea and bacteria. It is an integral membrane protein and is suggested to have about 15 membrane spanning domains. Proton translocating inorganic pyrophosphatase, like H(+)-ATPase, acidifies the vacuoles and is pivotal to the vacuolar secondary active transport systems in plants.
Probab=33.70 E-value=38 Score=36.38 Aligned_cols=25 Identities=36% Similarity=0.460 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCc
Q psy17095 56 DHMASVGRGAAESIAECQHQFRHHR 80 (275)
Q Consensus 56 ~lm~sV~~GaklAI~ECQ~QFr~~R 80 (275)
-.|.+|.+++..-++||++|||...
T Consensus 528 l~m~AVg~aA~~mV~EVRRQFreip 552 (697)
T TIGR01104 528 MTMKSVGRAALKMVEEVRRQFNTIP 552 (697)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 3588999999999999999999763
No 14
>KOG2505|consensus
Probab=32.63 E-value=89 Score=32.84 Aligned_cols=47 Identities=15% Similarity=0.331 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHhh---hcCCCCCCccCcCCCCCCCCCCCcccCCCCcchh
Q psy17095 122 HAIATAGVVYAVARS---CKDGSLPSCGCSRTARPKDLKREWLWGGCGDNLE 170 (275)
Q Consensus 122 ~AItSAGVv~aVTRA---CS~G~L~~CgCd~~~~~~~~~~~w~WGGCSDNI~ 170 (275)
|.++|..+.|+++.+ |..-.|.. |||+...+..+...|.-.. .++|.
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Lee-g~Dp~~kd~~Grtpy~ls~-nkdVk 476 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLEE-GCDPSTKDGAGRTPYSLSA-NKDVK 476 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHHh-cCCchhcccCCCCcccccc-cHHHH
Confidence 344666666766643 33322332 4887665433444565554 55554
No 15
>KOG1029|consensus
Probab=29.99 E-value=7.3e+02 Score=28.01 Aligned_cols=6 Identities=33% Similarity=0.700 Sum_probs=2.9
Q ss_pred ccCCCC
Q psy17095 81 WNCSSG 86 (275)
Q Consensus 81 WNCSs~ 86 (275)
|+=|.+
T Consensus 235 W~LsDv 240 (1118)
T KOG1029|consen 235 WTLSDV 240 (1118)
T ss_pred eeeecc
Confidence 555444
No 16
>PLN02255 H(+) -translocating inorganic pyrophosphatase
Probab=27.72 E-value=53 Score=35.71 Aligned_cols=25 Identities=32% Similarity=0.395 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCc
Q psy17095 56 DHMASVGRGAAESIAECQHQFRHHR 80 (275)
Q Consensus 56 ~lm~sV~~GaklAI~ECQ~QFr~~R 80 (275)
-.|.+|.+++..-++||++|||...
T Consensus 591 l~m~AVg~aA~~mV~EVRRQFreip 615 (765)
T PLN02255 591 MTMKSVGSAALKMVEEVRRQFNTIP 615 (765)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 3589999999999999999999764
No 17
>PF03030 H_PPase: Inorganic H+ pyrophosphatase; InterPro: IPR004131 Two types of proteins that hydrolyse inorganic pyrophosphate (PPi), very different in both amino acid sequence and structure, have been characterised to date: soluble and membrane-bound proton-pumping pyrophosphatases (sPPases and H(+)-PPases, respectively). sPPases are ubiquitous proteins that hydrolyse PPi to release heat, whereas H+-PPases, so far unidentified in animal and fungal cells, couple the energy of PPi hydrolysis to proton movement across biological membranes [, ]. The latter type is represented by this group of proteins. H+-PPases (3.6.1.1 from EC) are also called vacuolar-type inorganic pyrophosphatases (V-PPase) or pyrophosphate-energised vacuolar membrane proton pumps []. In plants, vacuoles contain two enzymes for acidifying the interior of the vacuole, the V-ATPase and the V-PPase (V is for vacuolar) []. Two distinct biochemical subclasses of H+-PPases have been characterised to date: K+-stimulated and K+-insensitive [, ]. For additional information please see [, ].; GO: 0004427 inorganic diphosphatase activity, 0009678 hydrogen-translocating pyrophosphatase activity, 0015992 proton transport, 0016020 membrane; PDB: 4A01_A.
Probab=27.65 E-value=54 Score=35.20 Aligned_cols=25 Identities=36% Similarity=0.522 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCc
Q psy17095 56 DHMASVGRGAAESIAECQHQFRHHR 80 (275)
Q Consensus 56 ~lm~sV~~GaklAI~ECQ~QFr~~R 80 (275)
-.|.+|.+++..-++|+++|||...
T Consensus 528 ~~m~aVg~aA~~mV~EvRrQFre~p 552 (682)
T PF03030_consen 528 LTMKAVGRAAGKMVEEVRRQFREIP 552 (682)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3588999999999999999999875
No 18
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=27.62 E-value=58 Score=34.90 Aligned_cols=25 Identities=36% Similarity=0.513 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCc
Q psy17095 56 DHMASVGRGAAESIAECQHQFRHHR 80 (275)
Q Consensus 56 ~lm~sV~~GaklAI~ECQ~QFr~~R 80 (275)
-.|.+|.+++...++||++|||...
T Consensus 503 l~m~AVg~aA~~mV~EVRrQFre~p 527 (666)
T PRK00733 503 LAMTAVGRAAGAMVEEVRRQFREIP 527 (666)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3588999999999999999999875
No 19
>KOG2412|consensus
Probab=27.34 E-value=3.4e+02 Score=28.90 Aligned_cols=9 Identities=22% Similarity=0.287 Sum_probs=4.1
Q ss_pred HHHHHHHHH
Q psy17095 57 HMASVGRGA 65 (275)
Q Consensus 57 lm~sV~~Ga 65 (275)
.|..|.+|.
T Consensus 51 t~~~v~d~~ 59 (591)
T KOG2412|consen 51 TNTTVRDGR 59 (591)
T ss_pred HHHHHHhhh
Confidence 344554443
No 20
>KOG2573|consensus
Probab=27.17 E-value=10 Score=38.56 Aligned_cols=17 Identities=24% Similarity=0.401 Sum_probs=8.4
Q ss_pred HHHHHHhhhcCCCCCCc
Q psy17095 129 VVYAVARSCKDGSLPSC 145 (275)
Q Consensus 129 Vv~aVTRACS~G~L~~C 145 (275)
|..-++.-||-..--+|
T Consensus 370 ISRyLAnKCSIAsrIDc 386 (498)
T KOG2573|consen 370 ISRYLANKCSIASRIDC 386 (498)
T ss_pred HHHHHHhhccHHHhhhh
Confidence 44555666664433334
No 21
>PF12132 DUF3587: Protein of unknown function (DUF3587); InterPro: IPR021982 This entry is represented by Hyposoter fugitivus ichnovirus, Gp7; it is a family of uncharacterised viral proteins.
Probab=22.91 E-value=1.1e+02 Score=28.10 Aligned_cols=45 Identities=16% Similarity=0.219 Sum_probs=33.9
Q ss_pred CCCCCcccccCCchhHHHHHHHHHHHHHHHHhhhcCCCCCCccCc
Q psy17095 104 PSVLPPTLHIGSREAAFTHAIATAGVVYAVARSCKDGSLPSCGCS 148 (275)
Q Consensus 104 ~~~fg~iL~~GTREtAFV~AItSAGVv~aVTRACS~G~L~~CgCd 148 (275)
.|+||.++..+..+-+=|.-|..--..|.--.-|+.|...+|.|.
T Consensus 96 lPvFGgi~pp~~~~F~svs~L~~FV~~hVhln~Cs~~~~AsC~Ch 140 (199)
T PF12132_consen 96 LPVFGGIVPPGMDQFTSVSELSNFVKMHVHLNKCSDYRYASCPCH 140 (199)
T ss_pred chhhCCCcCCccccccCHHHHHHHHHHHeeHhhccCCCCCcceee
Confidence 478999887777665556666655555555689999999999994
No 22
>KOG0112|consensus
Probab=22.14 E-value=75 Score=35.32 Aligned_cols=19 Identities=32% Similarity=0.469 Sum_probs=9.9
Q ss_pred CCCCCCCCCCCCCCccccc
Q psy17095 4 DLSSQPISEPSSPPINAGV 22 (275)
Q Consensus 4 ~~s~~~~~~~~~~~l~~~~ 22 (275)
|.+++-.++.++++|-.|.
T Consensus 424 dmtp~ak~e~s~~~I~~g~ 442 (975)
T KOG0112|consen 424 DMTPSAKFEESGPLIGNGT 442 (975)
T ss_pred ccCcccchhhcCCccccCc
Confidence 4455555555555554443
No 23
>PRK13687 hypothetical protein; Provisional
Probab=20.81 E-value=14 Score=29.82 Aligned_cols=47 Identities=21% Similarity=0.485 Sum_probs=29.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhhcCCCCCCccCcCCCCCCCCCCCcccCCCCcch
Q psy17095 114 GSREAAFTHAIATAGVVYAVARSCKDGSLPSCGCSRTARPKDLKREWLWGGCGDNL 169 (275)
Q Consensus 114 GTREtAFV~AItSAGVv~aVTRACS~G~L~~CgCd~~~~~~~~~~~w~WGGCSDNI 169 (275)
.-.|.-.+|+++-.|-.. +.++ ..|.+..-.|- +.++|.|+||+-.|
T Consensus 4 Sk~EQRvLHvLAqGGrI~-~~rd-~~gri~~v~C~-------TReG~~l~dctl~v 50 (85)
T PRK13687 4 SRQEQRTLHVLAQGGRIE-HERD-DSGRITAVECY-------TREGWLLADCTLAV 50 (85)
T ss_pred cHHHHHHHHHHhcCCeEE-EEEC-CCCcEEEEEEE-------ccCCcccCCCCHHH
Confidence 445777788877655442 2233 35666666663 34789999998544
No 24
>KOG2412|consensus
Probab=20.37 E-value=9.8e+02 Score=25.61 Aligned_cols=7 Identities=14% Similarity=0.102 Sum_probs=3.0
Q ss_pred HHHHHHh
Q psy17095 69 IAECQHQ 75 (275)
Q Consensus 69 I~ECQ~Q 75 (275)
.++|.++
T Consensus 70 e~e~~~~ 76 (591)
T KOG2412|consen 70 EDEMESD 76 (591)
T ss_pred HHHHHhc
Confidence 3444443
Done!