Query psy17095
Match_columns 275
No_of_seqs 148 out of 575
Neff 4.0
Searched_HMMs 13730
Date Fri Aug 16 21:45:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17095.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17095hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ieaa1 c.36.1.6 (A:471-700) P 10.6 69 0.005 26.7 2.7 27 108-134 92-118 (230)
2 d1nd1a_ d.92.1.9 (A:) Snake ve 10.0 1.2E+02 0.009 22.7 4.0 41 127-167 138-183 (202)
3 d1bswa_ d.92.1.9 (A:) Snake ve 10.0 1.4E+02 0.01 22.1 4.2 41 126-166 134-179 (197)
4 d1kufa_ d.92.1.9 (A:) Snake ve 9.7 1.5E+02 0.011 22.2 4.3 39 128-166 139-181 (201)
5 d1uhsa_ a.4.1.1 (A:) Homeodoma 9.2 44 0.0032 22.7 0.8 29 52-80 24-54 (72)
6 d2cuja1 a.4.1.18 (A:8-108) Tra 8.7 1.7E+02 0.013 20.7 4.1 11 3-13 3-13 (101)
7 d2e1oa1 a.4.1.1 (A:8-64) Homeo 8.2 46 0.0033 21.3 0.5 28 53-80 23-52 (57)
8 d1ansa_ g.11.1.1 (A:) Neurotox 7.1 54 0.0039 18.6 0.4 6 161-166 7-12 (27)
9 d1n1qa_ a.25.1.1 (A:) Dodecame 6.7 1.1E+02 0.0081 22.0 2.1 22 65-86 16-37 (149)
10 d2vqca1 a.4.5.78 (A:4-73) F-11 6.4 26 0.0019 24.0 -1.5 10 71-80 54-63 (70)
No 1
>d2ieaa1 c.36.1.6 (A:471-700) Pyruvate dehydrogenase E1 component, Pyr module {Escherichia coli [TaxId: 562]}
Probab=10.60 E-value=69 Score=26.72 Aligned_cols=27 Identities=19% Similarity=0.158 Sum_probs=24.3
Q ss_pred CcccccCCchhHHHHHHHHHHHHHHHH
Q psy17095 108 PPTLHIGSREAAFTHAIATAGVVYAVA 134 (275)
Q Consensus 108 g~iL~~GTREtAFV~AItSAGVv~aVT 134 (275)
|.+|.-|--|+..+.++++||++|++-
T Consensus 92 GQ~le~GI~E~g~~~~~~Aagtsy~~~ 118 (230)
T d2ieaa1 92 GQILQEGINELGAGCSWLAAATSYSTN 118 (230)
T ss_dssp CCBEECCSCHHHHHHHHHHHHTHHHHT
T ss_pred CcEeeccchhhhHHHHHHHhhhhHhhc
Confidence 778889999999999999999999764
No 2
>d1nd1a_ d.92.1.9 (A:) Snake venom metalloprotease {Terciopelo (Bothrops asper), bap1 [TaxId: 8722]}
Probab=10.03 E-value=1.2e+02 Score=22.74 Aligned_cols=41 Identities=10% Similarity=0.234 Sum_probs=24.2
Q ss_pred HHHHHHHHhhhcCCC-CCCccCcCCCC---C-CCCCCCcccCCCCc
Q psy17095 127 AGVVYAVARSCKDGS-LPSCGCSRTAR---P-KDLKREWLWGGCGD 167 (275)
Q Consensus 127 AGVv~aVTRACS~G~-L~~CgCd~~~~---~-~~~~~~w~WGGCSD 167 (275)
.-++|.|+....... -..|.|+.... + ......+.|.-||-
T Consensus 138 ~~~AHElGH~lG~~HD~~~c~C~~~~cIM~~~~~~~~~~~fS~CS~ 183 (202)
T d1nd1a_ 138 VTMAHELGHNLGIDHDTGSCSCGAKSCIMASVLSKVLSYEFSDCSQ 183 (202)
T ss_dssp HHHHHHHHHHTTCCCCCTTCCCSSSEETTCSSCCCCSCEECCHHHH
T ss_pred HHHHHHHHhhcCCccCCCCCCCCCCCcccccccCCCCCCccCHHHH
Confidence 347899999865442 24588864321 0 01223578999973
No 3
>d1bswa_ d.92.1.9 (A:) Snake venom metalloprotease {Five-pace snake (Agkistrodon acutus), acutolysin A [TaxId: 36307]}
Probab=9.96 E-value=1.4e+02 Score=22.08 Aligned_cols=41 Identities=15% Similarity=0.254 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhhcCCC-CCCccCcCCCC---C-CCCCCCcccCCCC
Q psy17095 126 TAGVVYAVARSCKDGS-LPSCGCSRTAR---P-KDLKREWLWGGCG 166 (275)
Q Consensus 126 SAGVv~aVTRACS~G~-L~~CgCd~~~~---~-~~~~~~w~WGGCS 166 (275)
+.-|+|.|+..-.... -..|.|+.... + ...+..+.|.-||
T Consensus 134 a~~~AHElGH~lG~~HD~~~c~C~~~~~IM~~~~~~~~~~~fS~CS 179 (197)
T d1bswa_ 134 AITLAHEMAHNLGVSHDEGSCSCGGKSCIMSPSISDETIKYFSDCS 179 (197)
T ss_dssp HHHHHHHHHHHTTCCCCCTTCCSSSSCCTTCSSCCTTCCSSCCHHH
T ss_pred hHHHHHHHHhhcCCccCCCCCCCCCCCeeCCCccCCCCCCCcCHHH
Confidence 3446799999854332 23588864311 1 0122345699998
No 4
>d1kufa_ d.92.1.9 (A:) Snake venom metalloprotease {Taiwan habu (Trimeresurus mucrosquamatus), atrolysin E [TaxId: 103944]}
Probab=9.66 E-value=1.5e+02 Score=22.21 Aligned_cols=39 Identities=13% Similarity=0.241 Sum_probs=22.3
Q ss_pred HHHHHHHhhhcCCCC--CCccCcCCCCCC--CCCCCcccCCCC
Q psy17095 128 GVVYAVARSCKDGSL--PSCGCSRTARPK--DLKREWLWGGCG 166 (275)
Q Consensus 128 GVv~aVTRACS~G~L--~~CgCd~~~~~~--~~~~~w~WGGCS 166 (275)
-++|.|+..-....= ..|+|+...=.. .......|.-||
T Consensus 139 ~~AHElGH~lG~~HD~~~~C~~~~~IM~~~~~~~~~~~fS~CS 181 (201)
T d1kufa_ 139 TMTHELGHNLGMEHDDKDKCKCDTCIMSAVISDKQSKLFSDCS 181 (201)
T ss_dssp HHHHHHHHHTTCCCCCTTTCCCSSSTTCSSCCTTCCSCCCHHH
T ss_pred HHHHHHHHhcCCCCCCCCCCCCCCeeCCcccCCCCCCCcCHhH
Confidence 478999987544321 248876432111 122345699998
No 5
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.18 E-value=44 Score=22.69 Aligned_cols=29 Identities=21% Similarity=0.179 Sum_probs=16.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHh--hccCc
Q psy17095 52 SLFADHMASVGRGAAESIAECQHQ--FRHHR 80 (275)
Q Consensus 52 r~~p~lm~sV~~GaklAI~ECQ~Q--Fr~~R 80 (275)
..||+...-..-+..++|.+.|-| |.|+|
T Consensus 24 n~yP~~~~r~~LA~~lgL~~~~VqvWFqNrR 54 (72)
T d1uhsa_ 24 NKHPDPTTLCLIAAEAGLTEEQTQKWFKQRL 54 (72)
T ss_dssp CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 356776555555555566555544 77766
No 6
>d2cuja1 a.4.1.18 (A:8-108) Transcriptional adaptor 2-like, TADA2L {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.73 E-value=1.7e+02 Score=20.75 Aligned_cols=11 Identities=27% Similarity=0.277 Sum_probs=5.1
Q ss_pred CCCCCCCCCCC
Q psy17095 3 SDLSSQPISEP 13 (275)
Q Consensus 3 ~~~s~~~~~~~ 13 (275)
+-+||.|....
T Consensus 3 ~~~~p~~~~~s 13 (101)
T d2cuja1 3 SGLSPSVLMAS 13 (101)
T ss_dssp CCCCCCCCCCC
T ss_pred CCCCCCCCCCC
Confidence 34555444443
No 7
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.23 E-value=46 Score=21.33 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=15.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHh--hccCc
Q psy17095 53 LFADHMASVGRGAAESIAECQHQ--FRHHR 80 (275)
Q Consensus 53 ~~p~lm~sV~~GaklAI~ECQ~Q--Fr~~R 80 (275)
.||+.-.-..-|..++|.+.|-+ |.|+|
T Consensus 23 ~yp~~~~r~~LA~~l~L~~~qV~~WFqNrR 52 (57)
T d2e1oa1 23 KYLSPPERKRLAKMLQLSERQVKTWFQNRR 52 (57)
T ss_dssp SSCCHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCHHHhhHhhhhhh
Confidence 45655554455555566666654 55544
No 8
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=7.14 E-value=54 Score=18.63 Aligned_cols=6 Identities=67% Similarity=2.068 Sum_probs=4.7
Q ss_pred ccCCCC
Q psy17095 161 LWGGCG 166 (275)
Q Consensus 161 ~WGGCS 166 (275)
-||||-
T Consensus 7 ywggcp 12 (27)
T d1ansa_ 7 YWGGCP 12 (27)
T ss_dssp TTTTCS
T ss_pred cccCCc
Confidence 599994
No 9
>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}
Probab=6.66 E-value=1.1e+02 Score=22.02 Aligned_cols=22 Identities=9% Similarity=0.237 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhhccCcccCCCC
Q psy17095 65 AAESIAECQHQFRHHRWNCSSG 86 (275)
Q Consensus 65 aklAI~ECQ~QFr~~RWNCSs~ 86 (275)
+...+.....|+++..||+.+.
T Consensus 16 ~lA~~~~l~~~~~~~HWnv~G~ 37 (149)
T d1n1qa_ 16 QVANWVVLYVKLHNFHWNVNGP 37 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHCCST
T ss_pred HHHHHHHHHHHHhhhhhceeCC
Confidence 3344568889999999999865
No 10
>d2vqca1 a.4.5.78 (A:4-73) F-112 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=6.45 E-value=26 Score=24.00 Aligned_cols=10 Identities=30% Similarity=0.992 Sum_probs=7.8
Q ss_pred HHHHhhccCc
Q psy17095 71 ECQHQFRHHR 80 (275)
Q Consensus 71 ECQ~QFr~~R 80 (275)
||.-|..|+|
T Consensus 54 ecevq~knr~ 63 (70)
T d2vqca1 54 ECEVQYKNRK 63 (70)
T ss_dssp TEEEEECSSC
T ss_pred hhheeeccch
Confidence 7888888776
Done!