RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17095
(275 letters)
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 38.9 bits (90), Expect = 3e-04
Identities = 13/88 (14%), Positives = 26/88 (29%)
Query: 184 RRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKK 243
R + K K + + + +K+ K K E K+ + +K K+
Sbjct: 182 LERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKE 241
Query: 244 EKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
+ + + K K E
Sbjct: 242 NAENYLIKISENKNDAKVSLLLNNCDAE 269
Score = 37.3 bits (86), Expect = 0.001
Identities = 16/91 (17%), Positives = 27/91 (29%)
Query: 180 RRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKK 239
+ R K + + K E +KE K + K E K+ + +K K+
Sbjct: 182 LERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKE 241
Query: 240 KKKKEKKKKKEEKKKEKKKKKKKKEKKKKKD 270
+ K E K K +
Sbjct: 242 NAENYLIKISENKNDAKVSLLLNNCDAEYSK 272
Score = 33.8 bits (77), Expect = 0.016
Identities = 13/99 (13%), Positives = 34/99 (34%)
Query: 173 YKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKK 232
+ Q + K + E++ K K K K + +K+ K +
Sbjct: 158 NCKNIPQEELQITQWIKEWHGEFLLERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRD 217
Query: 233 KKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
+ K + K+ + +K ++ + + + K++
Sbjct: 218 WIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKND 256
Score = 33.1 bits (75), Expect = 0.030
Identities = 19/90 (21%), Positives = 29/90 (32%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
+ R K + K K E EKE K ++ K E K+ E +K K+
Sbjct: 184 RDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENA 243
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEKK 266
E K + K + + K
Sbjct: 244 ENYLIKISENKNDAKVSLLLNNCDAEYSKY 273
Score = 32.3 bits (73), Expect = 0.049
Identities = 13/90 (14%), Positives = 26/90 (28%)
Query: 173 YKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKK 232
K + + + + ++E K + K E K+ E +K K+
Sbjct: 184 RDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENA 243
Query: 233 KKKKEKKKKKKEKKKKKEEKKKEKKKKKKK 262
+ K + K K + K
Sbjct: 244 ENYLIKISENKNDAKVSLLLNNCDAEYSKY 273
Score = 30.8 bits (69), Expect = 0.15
Identities = 12/61 (19%), Positives = 20/61 (32%)
Query: 212 KKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
+ + K K K K + +KE + + K E K+ E +K E
Sbjct: 182 LERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKE 241
Query: 272 G 272
Sbjct: 242 N 242
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 39.0 bits (90), Expect = 4e-04
Identities = 10/99 (10%), Positives = 48/99 (48%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
++ ++ + K + + + E + + ++ +++++ ++ ++ EK + + +
Sbjct: 200 TEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQL 259
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRRR 275
K++++ K +E+++ K+ +K+ K + + +
Sbjct: 260 LKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQT 298
Score = 38.6 bits (89), Expect = 5e-04
Identities = 15/75 (20%), Positives = 41/75 (54%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
+ +R+ ++ ++K + +E ++ EK E + + KE+++ K +++E+ K+ +K
Sbjct: 225 EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQK 284
Query: 237 EKKKKKKEKKKKKEE 251
E + K E + + +
Sbjct: 285 ESRIMKNEIQDLQTK 299
Score = 29.3 bits (65), Expect = 0.49
Identities = 7/66 (10%), Positives = 31/66 (46%)
Query: 169 LEYGYKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEK 228
+E + ++ ++ + + + +E++ + +++E+ ++ +K+ + K E
Sbjct: 234 MEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEI 293
Query: 229 KKKKKK 234
+ + K
Sbjct: 294 QDLQTK 299
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 38.5 bits (89), Expect = 6e-04
Identities = 18/89 (20%), Positives = 40/89 (44%)
Query: 181 RKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKK 240
+ + K + K++ E + K++ ++ KKKE+ K+ K+ ++ +K +
Sbjct: 215 KTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYS 274
Query: 241 KKKEKKKKKEEKKKEKKKKKKKKEKKKKK 269
+ K K + KK +K E + K+
Sbjct: 275 EFKSIKPEVYLKKYSEKCSNLNFEDEFKE 303
Score = 38.1 bits (88), Expect = 8e-04
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 185 RRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKE 244
+ K K E +EK E K+K ++ KKK+E K+ K+ ++ +K K
Sbjct: 215 KTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYS 274
Query: 245 KKKKKEEKKKEKKKKKKKKEKKKKKD 270
+ K + + KK +K + +
Sbjct: 275 EFKSIKPEVYLKKYSEKCSNLNFEDE 300
Score = 37.3 bits (86), Expect = 0.001
Identities = 16/103 (15%), Positives = 42/103 (40%)
Query: 169 LEYGYKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEK 228
+ + K + +++ + + +++ +E +KK+E K+ K+ ++ ++
Sbjct: 208 GDDYCQDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKG 267
Query: 229 KKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
K + K K + KK EK + + KE+ +
Sbjct: 268 NNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYK 310
Score = 33.1 bits (75), Expect = 0.031
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 202 EKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKK 261
+ K + + K E K++ + + K K K+ KKK++ K+ K+ ++ ++ K
Sbjct: 213 QDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKM 272
Query: 262 KKEKKKKKDEG 272
E K K E
Sbjct: 273 YSEFKSIKPEV 283
Score = 32.7 bits (74), Expect = 0.035
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 189 KRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKK 248
+ K K E K E K++ + + K K K+ KK+++ K+ K+ ++ +K K
Sbjct: 213 QDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKM 272
Query: 249 KEEKKKEKKKKKKKKEKKKKKDEG 272
E K K + KK +K +
Sbjct: 273 YSEFKSIKPEVYLKKYSEKCSNLN 296
Score = 29.3 bits (65), Expect = 0.48
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 215 KKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRR 274
+ K K + K E K+K + K+K K+ +KK+E K+ K+ ++ +K + +
Sbjct: 213 QDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKM 272
Score = 27.7 bits (61), Expect = 1.5
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 216 KKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRRR 275
+ + K E K + K+K + + K+K K+ KKKE+ K+ K+ ++ +K +
Sbjct: 213 QDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKM 272
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium
knowlesi [TaxId: 5850]}
Length = 294
Score = 37.7 bits (87), Expect = 9e-04
Identities = 13/94 (13%), Positives = 29/94 (30%)
Query: 178 KERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKE 237
+E + + +++ K E+ + + K + +KKK+
Sbjct: 179 REWGRDYMSELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVL 238
Query: 238 KKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
K KK +K + K++ E
Sbjct: 239 STKFSSVKKTQKIGTENIATAYDILKQELNGFKE 272
Score = 35.4 bits (81), Expect = 0.005
Identities = 11/95 (11%), Positives = 29/95 (30%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
+ + + + ++ + K ++ +KKK+ K KK
Sbjct: 188 ELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVKK 247
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
+K + + K+E K+ + +
Sbjct: 248 TQKIGTENIATAYDILKQELNGFKEATFENEINKR 282
Score = 35.0 bits (80), Expect = 0.007
Identities = 11/84 (13%), Positives = 24/84 (28%)
Query: 186 RKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEK 245
+ K ++ +KK++ K KK +K +
Sbjct: 201 ASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAY 260
Query: 246 KKKKEEKKKEKKKKKKKKEKKKKK 269
K+E K+ + + K+
Sbjct: 261 DILKQELNGFKEATFENEINKRDN 284
Score = 33.5 bits (76), Expect = 0.021
Identities = 13/77 (16%), Positives = 23/77 (29%)
Query: 196 EEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKE 255
E + E K++ K +K K K + +KK++
Sbjct: 179 REWGRDYMSELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVL 238
Query: 256 KKKKKKKKEKKKKKDEG 272
K K+ +K E
Sbjct: 239 STKFSSVKKTQKIGTEN 255
Score = 33.1 bits (75), Expect = 0.031
Identities = 13/70 (18%), Positives = 21/70 (30%)
Query: 203 KKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKK 262
+ K++ K EK K K + +KKK+ K K
Sbjct: 187 SELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVK 246
Query: 263 KEKKKKKDEG 272
K +K +
Sbjct: 247 KTQKIGTENI 256
Score = 32.7 bits (74), Expect = 0.033
Identities = 11/93 (11%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Query: 180 RRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKK-KKEK 238
+ + + ++ + K ++ KKK+ K K
Sbjct: 187 SELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVK 246
Query: 239 KKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
K +K + K++ KE + +
Sbjct: 247 KTQKIGTENIATAYDILKQELNGFKEATFENEI 279
Score = 32.3 bits (73), Expect = 0.053
Identities = 11/68 (16%), Positives = 23/68 (33%)
Query: 194 KEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKK 253
K ++ KK++ K +K +K + K++ KE + E K
Sbjct: 222 KSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINK 281
Query: 254 KEKKKKKK 261
++
Sbjct: 282 RDNLYNHL 289
Score = 31.1 bits (70), Expect = 0.10
Identities = 11/61 (18%), Positives = 21/61 (34%)
Query: 207 KKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKK 266
+K+K+ + K KK +K + K+E KE + + K+
Sbjct: 229 TRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKRDNLYNH 288
Query: 267 K 267
Sbjct: 289 L 289
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 36.7 bits (84), Expect = 0.002
Identities = 10/87 (11%), Positives = 40/87 (45%)
Query: 182 KQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKK 241
+ ++ K++RK + + ++ + K+ E K + +++ K+ + ++ +K
Sbjct: 103 ARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADI 162
Query: 242 KKEKKKKKEEKKKEKKKKKKKKEKKKK 268
K ++ +++ + + + ++ K
Sbjct: 163 NVTKADVEKARQQAQIRHQMAEDSKAD 189
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 34.9 bits (80), Expect = 0.003
Identities = 19/96 (19%), Positives = 47/96 (48%)
Query: 180 RRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKK 239
RR+ + +K+ + EE+ + ++ E K ++++ E++ +K E+ K ++K
Sbjct: 38 RRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEK 97
Query: 240 KKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRRR 275
+K + K+ + ++ +EK K +E R+
Sbjct: 98 LAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKN 133
Score = 34.5 bits (79), Expect = 0.004
Identities = 19/92 (20%), Positives = 45/92 (48%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
E +++ + +RK +E E + E+++ E++ +K ++ K K+K +K
Sbjct: 43 SLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKM 102
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKK 268
E K+ +E ++ ++K K ++ +K K
Sbjct: 103 ESNKENREAHLAAMLERLQEKDKHAEEVRKNK 134
Score = 33.7 bits (77), Expect = 0.007
Identities = 21/89 (23%), Positives = 47/89 (52%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
K E ++RR+ ++ + K EK E ++E +K ++ K KEK +K + K+ +
Sbjct: 50 KLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENR 109
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEK 265
E ++ ++++K E+ +K K+ ++
Sbjct: 110 EAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 33.7 bits (77), Expect = 0.008
Identities = 17/90 (18%), Positives = 41/90 (45%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
KK + RRK + + ++ E + E ++ +E K ++K +K + K+
Sbjct: 49 KKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKEN 108
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEKK 266
+ ++ +E+ K ++ +K K+ K+
Sbjct: 109 REAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 33.3 bits (76), Expect = 0.011
Identities = 18/91 (19%), Positives = 44/91 (48%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
+K+ R++ ++ + + E+ + E + +K E+ K K+K +K + K+
Sbjct: 48 QKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKE 107
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEKKK 267
++ ++ +EK K ++ +K KE K+
Sbjct: 108 NREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 32.5 bits (74), Expect = 0.018
Identities = 14/96 (14%), Positives = 43/96 (44%)
Query: 180 RRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKK 239
+R+ +E ++K E +E +K ++ + K +K+E ++E +K ++
Sbjct: 31 EFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNF 90
Query: 240 KKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRRR 275
K ++K ++ + ++ ++ ++ E +
Sbjct: 91 IKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKH 126
Score = 31.0 bits (70), Expect = 0.066
Identities = 12/93 (12%), Positives = 45/93 (48%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
+++ + +K+ ++ + +E E + ++++ E++ +K E+ K K+K
Sbjct: 39 RRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKL 98
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKK 269
+K + ++ ++ ++ ++K K ++ +
Sbjct: 99 AQKMESNKENREAHLAAMLERLQEKDKHAEEVR 131
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4
{Human (Homo sapiens) [TaxId: 9606]}
Length = 279
Score = 36.0 bits (82), Expect = 0.003
Identities = 15/102 (14%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKK---KEKKKKEKKKEKKKKKK 233
+ + + K++RK +E + +++ E K+ + K+ ++ ++ EK + ++
Sbjct: 91 LELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLD 150
Query: 234 KKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRRR 275
+ K EK K++ + ++ K + + + R +
Sbjct: 151 QDINATKADVEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQ 192
>d1kcfa2 c.55.3.7 (A:39-256) Mitochondrial resolvase ydc2 catalytic
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 218
Score = 35.0 bits (80), Expect = 0.005
Identities = 13/79 (16%), Positives = 27/79 (34%)
Query: 193 KKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEK 252
+K +++ + K K KKK + + K+ + +K E
Sbjct: 111 EKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILFEN 170
Query: 253 KKEKKKKKKKKEKKKKKDE 271
++ K + KKD+
Sbjct: 171 EEALYKWNNGSRVEFKKDD 189
Score = 32.0 bits (72), Expect = 0.059
Identities = 14/79 (17%), Positives = 26/79 (32%)
Query: 192 RKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEE 251
K+ E++ + K K KKK + + K+ +K E
Sbjct: 111 EKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILFEN 170
Query: 252 KKKEKKKKKKKKEKKKKKD 270
++ K + + KK D
Sbjct: 171 EEALYKWNNGSRVEFKKDD 189
Score = 28.5 bits (63), Expect = 0.73
Identities = 8/63 (12%), Positives = 20/63 (31%)
Query: 189 KRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKK 248
K + KKK + + K+ ++ + ++ K + K
Sbjct: 127 SLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFK 186
Query: 249 KEE 251
K++
Sbjct: 187 KDD 189
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 34.7 bits (80), Expect = 0.008
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 216 KKEKKKKEKKKEKKKKK---KKKKEKKKKKKEKKK--KKEEKKKEKKKKKKKKEK 265
+KE +EK K + + K + E +K KEEK K K++ +K ++
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 32.8 bits (75), Expect = 0.033
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 201 EEKKEEKKKEKKKEKKKEKKKKEKKKEK 228
+ + E +K+ K+EK K K++ EK ++
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 32.4 bits (74), Expect = 0.039
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 199 KEEEKKEEKKKEKKKEK---KKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEK 252
++E EEK K + + + + E + K+ KE+K K KE+ +K ++
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEAR--KQMSKEEKLKIKEENEKLLKE 137
Score = 32.0 bits (73), Expect = 0.061
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 208 KKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKK 262
+KE E+K K + + K + + +K+ K++K + K+E +K K+
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 31.6 bits (72), Expect = 0.071
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 206 EKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEK 245
+ + E +K+ KE+K K K++ +K K+ KE+
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKER 149
Score = 31.2 bits (71), Expect = 0.11
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 224 KKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
+K+ ++K K + + + + E +K+ K+EK K K+E
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEE 130
Score = 30.1 bits (68), Expect = 0.25
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKK 225
+ + E +++ KE+K + K+E +K K+
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 28.5 bits (64), Expect = 0.73
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 193 KKEEEEKEEEKKEEKKKEKKKEKKKEKK 220
K + E +++ KEEK K K++ +K K+
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 27.4 bits (61), Expect = 1.5
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 197 EEKEEEKKEEKKKEKKKEKKKEKKKKEK 224
+ + E +K+ K+EK K K++ +K ++
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 27.0 bits (60), Expect = 2.4
Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 219 KKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKK----EKKKKKKKKEKKKKK 269
+K+ +++ K + + + K + E +K+ EK K K++ EK K+
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 34.3 bits (79), Expect = 0.008
Identities = 10/59 (16%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 199 KEEEKKEEKKKEKKKEKKKEK-----KKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEK 252
+ K+ + K+ + + +K++KK+ ++KK+ + +++K EE
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 31.6 bits (72), Expect = 0.061
Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 212 KKEKKKEKKKKEKKKEKKKKK---KKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKK 268
+ K+ + K+ + K + + +KE+KK+ +EKK+ + ++EK ++
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLT--SQEKKQIRLEREKFEE 128
Query: 269 K 269
Sbjct: 129 D 129
Score = 31.2 bits (71), Expect = 0.081
Identities = 9/40 (22%), Positives = 25/40 (62%)
Query: 206 EKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEK 245
+ +KE+KK+ ++KK+ + + +K ++ K + ++E+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEEDYKFCELDGRREQ 141
Score = 31.2 bits (71), Expect = 0.084
Identities = 11/61 (18%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 208 KKEKKKEKKKEKKKKEKKKEK---KKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKE 264
+ K+ + K+ + K + +K++KK+ +EKK+ + +++K +E
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQ--LTSQEKKQIRLEREKFEE 128
Query: 265 K 265
Sbjct: 129 D 129
Score = 30.8 bits (70), Expect = 0.14
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 220 KKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
+ K+ + KE + K + +KE+KK+ +EKK+ + E
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLE 122
Score = 30.4 bits (69), Expect = 0.18
Identities = 7/28 (25%), Positives = 20/28 (71%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKK 225
+ ++E+K++ ++KK+ + E++K E+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 29.7 bits (67), Expect = 0.26
Identities = 9/59 (15%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 204 KEEKKKEKKKEKKKEKKKKEK---KKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKK 259
+ K+ E K+ + K + +K++KK+ ++KK+ ++++ ++
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 28.5 bits (64), Expect = 0.71
Identities = 7/28 (25%), Positives = 19/28 (67%)
Query: 193 KKEEEEKEEEKKEEKKKEKKKEKKKEKK 220
+ ++E+K++ +EKK+ + + +K E+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 27.4 bits (61), Expect = 1.7
Identities = 8/28 (28%), Positives = 19/28 (67%)
Query: 197 EEKEEEKKEEKKKEKKKEKKKEKKKKEK 224
+ ++E+KK+ +EKK+ + + +K +E
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 34.8 bits (79), Expect = 0.012
Identities = 17/124 (13%), Positives = 42/124 (33%), Gaps = 19/124 (15%)
Query: 170 EYGYKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEK----- 224
G+ KE + ++ + K EE ++ ++ + E+
Sbjct: 636 NLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTY 695
Query: 225 --------------KKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKD 270
+ +K K+K++KE + + K K+ + K + ++ ++D
Sbjct: 696 EYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRD 755
Query: 271 EGRR 274
R
Sbjct: 756 AEAR 759
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 33.8 bits (77), Expect = 0.012
Identities = 14/69 (20%), Positives = 29/69 (42%)
Query: 192 RKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEE 251
+K E + KK + ++ K + K + + KK +KK + K +K K+ +
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYI 165
Query: 252 KKKEKKKKK 260
K+ +
Sbjct: 166 DAISNKQGE 174
Score = 33.8 bits (77), Expect = 0.014
Identities = 13/71 (18%), Positives = 31/71 (43%)
Query: 201 EEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKK 260
E+K E + KK + ++ K + K + + +K +KK + K ++ ++ +
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYI 165
Query: 261 KKKEKKKKKDE 271
K+ + E
Sbjct: 166 DAISNKQGELE 176
Score = 33.1 bits (75), Expect = 0.023
Identities = 14/69 (20%), Positives = 31/69 (44%)
Query: 189 KRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKK 248
++K + + K+ + +++ K +K + E KK +KK + K +K KE +
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYI 165
Query: 249 KEEKKKEKK 257
K+ +
Sbjct: 166 DAISNKQGE 174
Score = 28.8 bits (64), Expect = 0.64
Identities = 15/81 (18%), Positives = 34/81 (41%)
Query: 187 KRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKK 246
R ++ + E+ K + + + E KK +KK + K +K K+ + K+
Sbjct: 113 SRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQ 172
Query: 247 KKKEEKKKEKKKKKKKKEKKK 267
+ E + K +E+++
Sbjct: 173 GELENYVSDGYKTALTEERRR 193
Score = 25.0 bits (54), Expect = 9.3
Identities = 8/50 (16%), Positives = 23/50 (46%)
Query: 226 KEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRRR 275
++K + + KK + +++ + +K + + KK +KK + +
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQ 155
Score = 25.0 bits (54), Expect = 9.8
Identities = 19/149 (12%), Positives = 53/149 (35%), Gaps = 2/149 (1%)
Query: 117 EAAFTHAIATAGVVYAVARSCKDGSLPSCGCSRTARPKDLKREWLWGGCGDNLEYGYKGG 176
+ A+ G + + ++ K+ + R + E + + L +
Sbjct: 49 AKGYFDALVKMGELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQK 108
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
+ + K+ + ++ + + K + E KK +KK + K +K K+ +
Sbjct: 109 VELDSRYLSAALKKYQTEQRSKGDALDK--CQAELKKLRKKSQGSKNPQKYSDKELQYID 166
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEK 265
K+ E + + K +++++
Sbjct: 167 AISNKQGELENYVSDGYKTALTEERRRFC 195
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 33.8 bits (77), Expect = 0.018
Identities = 13/90 (14%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 181 RKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKK-KKKKKEKK 239
++ K +++ + + E ++ + KK +E +
Sbjct: 242 VEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFL 301
Query: 240 KKKKEKKKKKEEKKKEKKKKKKKKEKKKKK 269
+ KE +K++E ++K ++ K K++ +K++
Sbjct: 302 QAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.9 bits (67), Expect = 0.32
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 173 YKGGKKERRKQRRRKRKRKRKKEEEEKEEEKK 204
+ KE +K+R + K +R K +EK E+++
Sbjct: 300 FLQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 27.2 bits (60), Expect = 2.5
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 179 ERRKQRRRKRKRKRKKEEEEKEEEKKEEKKK 209
+ + +KR+ +K K ++K EK++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 26.9 bits (59), Expect = 3.1
Identities = 7/34 (20%), Positives = 18/34 (52%)
Query: 178 KERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEK 211
+ + +KR+ +E+ + + KE+ +KE+
Sbjct: 298 NMFLQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 26.5 bits (58), Expect = 3.5
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 244 EKKKKKEEKKKEKKKKKKKKEKKKKKDEGRR 274
+ K+ +K++E ++K ++ + K+K E R
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 26.5 bits (58), Expect = 3.6
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 245 KKKKKEEKKKEKKKKKKKKEKKKKKDEGRRR 275
+ KE +K+ + ++K ++ K K+ + R
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 33.1 bits (75), Expect = 0.028
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 217 KEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKE 264
EK +E+ +EK +K K ++ + + E+ K K++ E
Sbjct: 214 PEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPDPPE 261
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus
thermophilus, strain hb27 [TaxId: 274]}
Length = 110
Score = 31.4 bits (71), Expect = 0.034
Identities = 11/62 (17%), Positives = 30/62 (48%)
Query: 190 RKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKK 249
R+ ++ ++ +E + E + K+ K ++K+ K ++ K ++ +EK+ +
Sbjct: 35 REVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARL 94
Query: 250 EE 251
E
Sbjct: 95 EA 96
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 32.6 bits (73), Expect = 0.040
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKK-KKEEKKKEK 256
E+E + K +K ++ K +K K + + + + + + E
Sbjct: 135 EREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHKLNLPED 194
Query: 257 KKKKKKKEKKKKKDEGRR 274
K + + E RR
Sbjct: 195 PTKWSQDDLLAFASEIRR 212
Score = 29.1 bits (64), Expect = 0.48
Identities = 10/71 (14%), Positives = 22/71 (30%)
Query: 201 EEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKK 260
E + E K K K+ + +K K + + + + + K
Sbjct: 132 EFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHKLNL 191
Query: 261 KKKEKKKKKDE 271
+ K +D+
Sbjct: 192 PEDPTKWSQDD 202
Score = 28.3 bits (62), Expect = 0.97
Identities = 14/72 (19%), Positives = 20/72 (27%), Gaps = 2/72 (2%)
Query: 202 EKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKK--KKEKKKKKEEKKKEKKKK 259
E E ++E K K K+ K +K K + E E K
Sbjct: 129 EDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHK 188
Query: 260 KKKKEKKKKKDE 271
E K +
Sbjct: 189 LNLPEDPTKWSQ 200
Score = 27.6 bits (60), Expect = 1.9
Identities = 8/57 (14%), Positives = 18/57 (31%)
Query: 218 EKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRR 274
E ++E K +K K+ + +K K E + + + +
Sbjct: 132 EFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHK 188
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 32.3 bits (72), Expect = 0.048
Identities = 13/108 (12%), Positives = 47/108 (43%)
Query: 167 DNLEYGYKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKK 226
+NLE K + + + + + ++E+E++ K + +K + + +++ E+++
Sbjct: 19 ENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAERER 78
Query: 227 EKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRR 274
E + ++++ K + + + + K ++ + R+
Sbjct: 79 EAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNILRQ 126
>d1je5a_ b.40.4.7 (A:) gp2.5 {Bacteriophage T7 [TaxId: 10760]}
Length = 197
Score = 31.5 bits (71), Expect = 0.061
Identities = 9/78 (11%), Positives = 24/78 (30%)
Query: 195 EEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKK 254
++ ++ ++ + +E ++ + + KK K + +
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTT 104
Query: 255 EKKKKKKKKEKKKKKDEG 272
K K + KK E
Sbjct: 105 TFKFKCYASFQDKKTKET 122
Score = 31.2 bits (70), Expect = 0.10
Identities = 10/79 (12%), Positives = 22/79 (27%)
Query: 191 KRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKE 250
+ + +E + ++ ++ + KK K +
Sbjct: 46 NKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTTT 105
Query: 251 EKKKEKKKKKKKKEKKKKK 269
K K + KK K+ K
Sbjct: 106 FKFKCYASFQDKKTKETKH 124
Score = 30.8 bits (69), Expect = 0.11
Identities = 5/73 (6%), Positives = 23/73 (31%)
Query: 203 KKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKK 262
++ + ++ ++ + ++ ++ + + KK K + +
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTT 104
Query: 263 KEKKKKKDEGRRR 275
K K + +
Sbjct: 105 TFKFKCYASFQDK 117
Score = 30.0 bits (67), Expect = 0.21
Identities = 11/79 (13%), Positives = 22/79 (27%)
Query: 193 KKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEK 252
K+ + + K E+ E+ + + KK K +
Sbjct: 46 NKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTTT 105
Query: 253 KKEKKKKKKKKEKKKKKDE 271
K K + +K K+
Sbjct: 106 FKFKCYASFQDKKTKETKH 124
Score = 30.0 bits (67), Expect = 0.23
Identities = 8/77 (10%), Positives = 20/77 (25%)
Query: 197 EEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEK 256
K+ + + K ++ E+ + + K+ K + +
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTT 104
Query: 257 KKKKKKKEKKKKKDEGR 273
K K + K
Sbjct: 105 TFKFKCYASFQDKKTKE 121
Score = 29.2 bits (65), Expect = 0.39
Identities = 10/75 (13%), Positives = 22/75 (29%)
Query: 189 KRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKK 248
+R + + EE ++ + + KK K + + K
Sbjct: 52 QRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTTTFKFKCY 111
Query: 249 KEEKKKEKKKKKKKK 263
+ K+ K+ K
Sbjct: 112 ASFQDKKTKETKHIN 126
Score = 28.8 bits (64), Expect = 0.58
Identities = 12/81 (14%), Positives = 24/81 (29%)
Query: 189 KRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKK 248
+ + + E K E+ E+ + + +K K + +
Sbjct: 46 NKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTTT 105
Query: 249 KEEKKKEKKKKKKKKEKKKKK 269
+ K + KK KE K
Sbjct: 106 FKFKCYASFQDKKTKETKHIN 126
>d1vqob1 b.43.3.2 (B:1-337) Ribosomal protein L3 {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 337
Score = 31.9 bits (72), Expect = 0.071
Identities = 5/59 (8%), Positives = 16/59 (27%)
Query: 213 KEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
++ + + + +E+ + E + + KKK +
Sbjct: 102 TDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPD 160
Score = 30.4 bits (68), Expect = 0.21
Identities = 7/59 (11%), Positives = 13/59 (22%)
Query: 212 KKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKD 270
E E + E +++ + + KKK D
Sbjct: 102 TDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPD 160
Score = 26.9 bits (59), Expect = 2.8
Identities = 3/57 (5%), Positives = 14/57 (24%)
Query: 211 KKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKK 267
+ + + + ++ +++ + + KKK
Sbjct: 102 TDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKK 158
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 31.7 bits (71), Expect = 0.075
Identities = 5/96 (5%), Positives = 31/96 (32%), Gaps = 3/96 (3%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
+ + + + + + + + + K E +
Sbjct: 153 VMGKERPQAKDVVVREGEVIFPDLRTYIQGSGRTSRLFAGGLTKGASFLLEDDSELLSAF 212
Query: 237 EKKKKKKEKKKKKEEK---KKEKKKKKKKKEKKKKK 269
++ K + + K ++ +K ++ + +++ +++
Sbjct: 213 IERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRR 248
Score = 28.2 bits (62), Expect = 1.1
Identities = 10/76 (13%), Positives = 26/76 (34%)
Query: 165 CGDNLEYGYKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEK 224
D Y G+ R + E++ + E+ K E K + +
Sbjct: 173 FPDLRTYIQGSGRTSRLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFE 232
Query: 225 KKEKKKKKKKKKEKKK 240
K ++ + + + +++
Sbjct: 233 KLSRELDESRDRYRRR 248
>d1twfa_ e.29.1.2 (A:) RBP1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 1449
Score = 31.4 bits (70), Expect = 0.15
Identities = 7/72 (9%), Positives = 20/72 (27%)
Query: 203 KKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKK 262
+ + + K KK+ K K + + + + + +
Sbjct: 115 DEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQLVSRGGCGNTQPTIR 174
Query: 263 KEKKKKKDEGRR 274
K+ K ++
Sbjct: 175 KDGLKLVGSWKK 186
>d1ek8a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Escherichia
coli [TaxId: 562]}
Length = 185
Score = 30.3 bits (68), Expect = 0.18
Identities = 13/74 (17%), Positives = 30/74 (40%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKK 257
+E K K + E+ + + ++ K K K+K+ + + ++ +++ +K
Sbjct: 106 TEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTD 165
Query: 258 KKKKKKEKKKKKDE 271
KK E E
Sbjct: 166 AAIKKIEAALADKE 179
Score = 28.4 bits (63), Expect = 0.74
Identities = 15/74 (20%), Positives = 29/74 (39%)
Query: 183 QRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKK 242
+ RRK K + E E+ +++ + K K KE ++ ++ + +K
Sbjct: 107 EERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDA 166
Query: 243 KEKKKKKEEKKKEK 256
KK + KE
Sbjct: 167 AIKKIEAALADKEA 180
Score = 26.9 bits (59), Expect = 2.2
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 195 EEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKK-KEKKKKKKEKKKKKEEKK 253
EE K+ K + E+ + + ++ K K K K+ E ++ + +K
Sbjct: 107 EERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDA 166
Query: 254 KEKKKKKKKKEKKK 267
KK + +K+
Sbjct: 167 AIKKIEAALADKEA 180
Score = 26.5 bits (58), Expect = 2.9
Identities = 14/74 (18%), Positives = 30/74 (40%)
Query: 178 KERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKE 237
+ERRK + + + ++ +++ K K K KE + + ++ + +K
Sbjct: 107 EERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDA 166
Query: 238 KKKKKKEKKKKKEE 251
KK + KE
Sbjct: 167 AIKKIEAALADKEA 180
>d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage
phi-29 [TaxId: 10756]}
Length = 388
Score = 30.6 bits (68), Expect = 0.18
Identities = 10/78 (12%), Positives = 25/78 (32%)
Query: 191 KRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKE 250
+ + ++ +K E ++ K ++K + K+ K +
Sbjct: 276 TGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYLRQKTYIQDIYMKEVDGKLVEGSPDDYT 335
Query: 251 EKKKEKKKKKKKKEKKKK 268
+ K K + KK+
Sbjct: 336 DIKFSVKCAGMTDKIKKE 353
Score = 28.3 bits (62), Expect = 1.2
Identities = 9/61 (14%), Positives = 19/61 (31%)
Query: 215 KKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRR 274
+K + K+ K + + K K K KK+ + K + +
Sbjct: 310 QKTYIQDIYMKEVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKP 369
Query: 275 R 275
+
Sbjct: 370 K 370
Score = 28.3 bits (62), Expect = 1.2
Identities = 13/77 (16%), Positives = 24/77 (31%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKK 257
E K K +K + K+ K + + K K + KK+
Sbjct: 297 AHESTFKRAKYLRQKTYIQDIYMKEVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTF 356
Query: 258 KKKKKKEKKKKKDEGRR 274
+ K +K K + +
Sbjct: 357 ENFKVGFSRKMKPKPVQ 373
Score = 27.1 bits (59), Expect = 2.4
Identities = 11/63 (17%), Positives = 18/63 (28%)
Query: 208 KKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKK 267
K+ K + K K + KK+ + K +K K K +
Sbjct: 320 KEVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPKPVQVPGGVV 379
Query: 268 KKD 270
D
Sbjct: 380 LVD 382
>d1v3ea_ b.68.1.1 (A:) Hemagglutinin-neuraminidase glycoprotein
{Human parainfluenza virus type 3 [TaxId: 11216]}
Length = 431
Score = 30.2 bits (68), Expect = 0.24
Identities = 17/78 (21%), Positives = 24/78 (30%), Gaps = 27/78 (34%)
Query: 78 HHRWNCSSGGPGAGGGGGGKSESTT---APSVLP-----------PTLHIGSREAAFTHA 123
W C+SG P K+ P +L P+L I A+T
Sbjct: 13 DDFWRCTSGLPSLM-----KTPKIRLMPGPGLLAMPTTVDGCIRTPSLVINDLIYAYTSN 67
Query: 124 IATAGVVYAVARSCKDGS 141
+ T G C+D
Sbjct: 68 LITRG--------CQDIG 77
>d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide
phosphodiesterase 1b, PDE1B {Human (Homo sapiens)
[TaxId: 9606]}
Length = 357
Score = 30.0 bits (67), Expect = 0.26
Identities = 8/50 (16%), Positives = 22/50 (44%)
Query: 179 ERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEK 228
E K + + + R+ + + + + + K+ ++ K+K KE+
Sbjct: 305 EDSKSKNQPSFQWRQPSLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKER 354
Score = 28.1 bits (62), Expect = 1.1
Identities = 8/51 (15%), Positives = 23/51 (45%)
Query: 195 EEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEK 245
+E+ K + + + ++ + + + + K+ +E K+K KE+
Sbjct: 304 DEDSKSKNQPSFQWRQPSLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKER 354
Score = 27.7 bits (61), Expect = 1.4
Identities = 6/48 (12%), Positives = 16/48 (33%)
Query: 191 KRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEK 238
+ K + + + + + K ++ K+K KE+
Sbjct: 307 SKSKNQPSFQWRQPSLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKER 354
>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast
(Saccharomyces cerevisiae), Y2 [TaxId: 4932]}
Length = 334
Score = 30.1 bits (67), Expect = 0.29
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 207 KKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKE 255
K+ E +E+ + K K+K K + K K + + K KE +K+E
Sbjct: 3 KELETLREENRVKSDMLKEKLSKDAENHKAYLKSHQVHRHKLKEMEKEE 51
>d1mswd_ e.8.1.3 (D:) T7 RNA polymerase {Bacteriophage T7 [TaxId:
10760]}
Length = 882
Score = 29.7 bits (66), Expect = 0.37
Identities = 10/66 (15%), Positives = 21/66 (31%)
Query: 196 EEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKE 255
E+E + + + + K+ +E+ K KK + E K +
Sbjct: 145 EDEARFGRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLSKGLLGGEAWSSWH 204
Query: 256 KKKKKK 261
K+
Sbjct: 205 KEDSIH 210
Score = 29.7 bits (66), Expect = 0.42
Identities = 10/57 (17%), Positives = 18/57 (31%)
Query: 207 KKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKK 263
+ E K KK +++ K+ KK + + K E K+
Sbjct: 154 RDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLSKGLLGGEAWSSWHKEDSIH 210
Score = 29.4 bits (65), Expect = 0.54
Identities = 8/66 (12%), Positives = 23/66 (34%)
Query: 200 EEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKK 259
E+E + + ++ + + K+ +++ K KK + + K +
Sbjct: 145 EDEARFGRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLSKGLLGGEAWSSWH 204
Query: 260 KKKKEK 265
K+
Sbjct: 205 KEDSIH 210
Score = 25.5 bits (55), Expect = 9.4
Identities = 7/42 (16%), Positives = 17/42 (40%)
Query: 227 EKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKK 268
E + + + E K KK +++ ++ KK + +
Sbjct: 147 EARFGRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEAD 188
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 268
Score = 29.7 bits (66), Expect = 0.37
Identities = 11/57 (19%), Positives = 22/57 (38%)
Query: 209 KEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEK 265
+ KE K+ + + + KK+E K K E ++ +KK+ +
Sbjct: 115 ERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQ 171
Score = 27.4 bits (60), Expect = 1.7
Identities = 9/54 (16%), Positives = 21/54 (38%)
Query: 202 EKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKE 255
E+ ++ K+ + + + + KK+E K K E + +K+
Sbjct: 115 ERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKK 168
Score = 25.8 bits (56), Expect = 5.9
Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 192 RKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEE 251
++++ +E K+ + + + + K K++ K K E + +KK+ +
Sbjct: 114 KERDLKEILTLKEVFQIASNDHDAAINRYSRLSK--KRENDKVKYEVTEDVYTSRKKQHQ 171
Query: 252 KKKEKKKKKKKKEKKKKKD 270
+ KKK
Sbjct: 172 TMMHYFCALNTLQYKKKIA 190
>d1y6va1 c.76.1.1 (A:1-449) Alkaline phosphatase {Escherichia coli
[TaxId: 562]}
Length = 449
Score = 29.3 bits (65), Expect = 0.49
Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 1/106 (0%)
Query: 118 AAFTHAIATAGVVYAVARSCKDGSLPSCGCSRTARPKDLKREWLWGGCGDNLEYGYKGGK 177
A A A V + +R C S S C A K K + GG
Sbjct: 149 AELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGA 208
Query: 178 KE-RRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKK 222
K + + K +E+ + + + ++K
Sbjct: 209 KTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKP 254
>d1eh1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermus
thermophilus [TaxId: 274]}
Length = 185
Score = 28.8 bits (64), Expect = 0.51
Identities = 15/74 (20%), Positives = 32/74 (43%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKK 257
+E K + + E+ + + +++ K KK KE + E K+ + E +K
Sbjct: 107 TEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITD 166
Query: 258 KKKKKKEKKKKKDE 271
+ K ++ +K E
Sbjct: 167 EFIAKADQLAEKKE 180
>d1rw6a_ a.47.4.1 (A:) CAPPD, an extracellular domain of amyloid
beta A4 protein {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 28.6 bits (64), Expect = 0.55
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 178 KERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKK 213
KER + + R+R + +E EE E + K K +KK
Sbjct: 22 KERLEAKHRERMSQVMREWEEAERQAKNLPKADKKA 57
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase,
PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]}
Length = 447
Score = 29.2 bits (65), Expect = 0.56
Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Query: 167 DNLEYGYKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKK 226
D EYG+ G +R K E + + KE + + K K+ K
Sbjct: 86 DAAEYGF-GMNMSMFARRTHLADLAAKALESDASGDVKEALQGWLAGKNDPIKSKEYGDK 144
Query: 227 EKKKKKKKKKEKKKKKKEKKKKKEEKK 253
KK +K + +K
Sbjct: 145 LKKLLAGQKDGLLGQIAAMSDLYTKKS 171
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 237
Score = 28.5 bits (63), Expect = 0.80
Identities = 9/53 (16%), Positives = 26/53 (49%)
Query: 219 KKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
K + + + KK E ++ + KKK++ K +++ ++ ++ + K+
Sbjct: 138 DKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEI 190
Score = 27.8 bits (61), Expect = 1.2
Identities = 9/74 (12%), Positives = 31/74 (41%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKK 257
+ + ++ +E + + KK E ++ KKK++ K ++ ++ ++ + ++
Sbjct: 131 DPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEI 190
Query: 258 KKKKKKEKKKKKDE 271
+ + E
Sbjct: 191 AESSMFNLLEMDIE 204
Score = 25.8 bits (56), Expect = 6.3
Identities = 10/68 (14%), Positives = 29/68 (42%)
Query: 179 ERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEK 238
E + + K+ + ++ E + + KK + ++ KKK++ K ++
Sbjct: 116 EVKDSLDIEVKQNFIDPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDE 175
Query: 239 KKKKKEKK 246
+ ++ +K
Sbjct: 176 ELRQALEK 183
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
PAC) {Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 28.5 bits (63), Expect = 0.86
Identities = 10/45 (22%), Positives = 15/45 (33%)
Query: 211 KKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKE 255
+K K K + E+ K E +K K E E +
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQN 45
Score = 28.1 bits (62), Expect = 1.1
Identities = 13/82 (15%), Positives = 22/82 (26%)
Query: 189 KRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKK 248
K K E+E+ K + EK K + + + + + K
Sbjct: 8 PVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTTDGKFLKA 67
Query: 249 KEEKKKEKKKKKKKKEKKKKKD 270
K K K +K
Sbjct: 68 SAVDDAFSKSTSKAKYVQKILQ 89
Score = 28.1 bits (62), Expect = 1.2
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 237 EKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEG 272
+K K K E ++ K + +K K ++G
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDG 36
Score = 27.3 bits (60), Expect = 2.1
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 236 KEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKD 270
++ K K E+++ K + EK K +D
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNED 35
Score = 26.9 bits (59), Expect = 2.6
Identities = 6/40 (15%), Positives = 14/40 (35%)
Query: 228 KKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKK 267
+K + K + E+ K + +K K + +
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTE 40
Score = 26.9 bits (59), Expect = 3.0
Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 1/70 (1%)
Query: 202 EKKEEKKKEKKKEKKKEKKKKEK-KKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKK 260
+K K K + E+ + E +K K + + + E
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTT 60
Query: 261 KKKEKKKKKD 270
K K
Sbjct: 61 DGKFLKASAV 70
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 109
Score = 26.7 bits (59), Expect = 1.6
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 189 KRKRKKEEEEKEEEKKEE 206
RKK E E+ + +
Sbjct: 86 NTLRKKGEVEQPGDTQVV 103
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS)
{Pyrococcus abyssi [TaxId: 29292]}
Length = 210
Score = 27.5 bits (60), Expect = 1.7
Identities = 8/56 (14%), Positives = 17/56 (30%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKK 232
+ K + ++ K E KEK ++ + ++ K K
Sbjct: 155 DQIIYFILNYMAKGNPEGARILLDKYYKREDVIRVAKEKFGDEAEVVLRRVYKDIK 210
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 26.4 bits (58), Expect = 1.7
Identities = 12/77 (15%), Positives = 28/77 (36%)
Query: 183 QRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKK 242
Q +E+ E ++ + +K+ KK E+++ + K K
Sbjct: 21 QELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSP 80
Query: 243 KEKKKKKEEKKKEKKKK 259
+++ KE ++K
Sbjct: 81 QDRAAYKEYISNKRKSG 97
Score = 26.0 bits (57), Expect = 2.1
Identities = 10/78 (12%), Positives = 28/78 (35%)
Query: 184 RRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKK 243
+ KE + + ++ + +KE KK ++++++ K K
Sbjct: 20 SQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLS 79
Query: 244 EKKKKKEEKKKEKKKKKK 261
+ + ++ K+K
Sbjct: 80 PQDRAAYKEYISNKRKSG 97
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 27.8 bits (61), Expect = 1.8
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 232 KKKKKEKKKKKKE----KKKKKEEKKKEKKKKKK 261
K K+ E K+ KE + K K +K + KKK
Sbjct: 16 KSKEAEIKRINKELANIRSKFKGDKALDGYSKKK 49
Score = 27.4 bits (60), Expect = 2.2
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 215 KKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKK 248
K KE + K KE + K K K KKK
Sbjct: 16 KSKEAEIKRINKELANIRSKFKGDKALDGYSKKK 49
Score = 27.4 bits (60), Expect = 2.4
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 204 KEEKKKEKKKEKKKEKKK-KEKKKEKKKKKKK 234
KE + K KE + K K K KKK
Sbjct: 18 KEAEIKRINKELANIRSKFKGDKALDGYSKKK 49
Score = 26.7 bits (58), Expect = 3.7
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 211 KKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKE 244
K KE + ++ KE + K K K KK+
Sbjct: 16 KSKEAEIKRINKELANIRSKFKGDKALDGYSKKK 49
Score = 26.7 bits (58), Expect = 3.8
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 199 KEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKK 231
KE E K KE + K K K KKK
Sbjct: 18 KEAEIKR-INKELANIRSKFKGDKALDGYSKKK 49
>d1wqga1 d.67.3.1 (A:2-184) Ribosome recycling factor, RRF
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 183
Score = 27.2 bits (60), Expect = 1.8
Identities = 14/74 (18%), Positives = 34/74 (45%)
Query: 178 KERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKE 237
+ERR++ ++ K K ++ + +++ ++ + K+ E + E + +K K +
Sbjct: 106 EERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQ 165
Query: 238 KKKKKKEKKKKKEE 251
+ E K KE
Sbjct: 166 YVTQIDELVKHKEG 179
Score = 26.1 bits (57), Expect = 4.1
Identities = 13/72 (18%), Positives = 34/72 (47%)
Query: 185 RRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKE 244
RR+ K+ K + E+ + +++ +E + +K+ E +++ + +K +K +
Sbjct: 108 RRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYV 167
Query: 245 KKKKKEEKKKEK 256
+ + K KE
Sbjct: 168 TQIDELVKHKEG 179
>d1is1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 185
Score = 27.2 bits (60), Expect = 1.9
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEE------ 251
+E K K + E + + ++ K K+K+ + E +K +EE
Sbjct: 106 TEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTD 165
Query: 252 ---KKKEKKKKKKKKE 264
KK ++ K+KE
Sbjct: 166 VAVKKIDEVLAAKEKE 181
Score = 24.9 bits (54), Expect = 9.7
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 178 KERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKK--KK 235
+ERRK + + + + +++ K K KE + E +K +++ +K
Sbjct: 107 EERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDV 166
Query: 236 KEKKKKKKEKKKKKE 250
KK + K+KE
Sbjct: 167 AVKKIDEVLAAKEKE 181
>d1f3ub_ b.65.1.1 (B:) TFIIF alpha subunit, Rap74 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 26.7 bits (59), Expect = 2.1
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 186 RKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKK 233
R K+ +EEE E + K +E+ + KK KE + + +
Sbjct: 45 RDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQ 92
Score = 26.3 bits (58), Expect = 2.7
Identities = 11/70 (15%), Positives = 28/70 (40%)
Query: 190 RKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKK 249
+ E++ K+ ++E+ E + K +E+ ++KK K+ + E +
Sbjct: 36 ATWNQARLERDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWL 95
Query: 250 EEKKKEKKKK 259
+ +K
Sbjct: 96 LRVNGKSGRK 105
Score = 25.2 bits (55), Expect = 6.4
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
+ + R +K +EEE E E ++ ++E +++K K+ + + +
Sbjct: 37 TWNQARLERDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLL 96
Query: 237 EKKKKKKEK 245
K K
Sbjct: 97 RVNGKSGRK 105
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase
{Clostridium thermocellum [TaxId: 1515]}
Length = 164
Score = 27.0 bits (59), Expect = 2.1
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 220 KKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKK 259
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 26.6 bits (58), Expect = 2.2
Identities = 9/42 (21%), Positives = 15/42 (35%)
Query: 229 KKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKD 270
K K +K KK+ + K K + +K K +
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLINPE 49
Score = 26.6 bits (58), Expect = 2.5
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 222 KEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKK 261
+ K +K KK+ + K K+E EK K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 26.2 bits (57), Expect = 3.2
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 221 KKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKK 260
K + +K KK+ E K K E ++ K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 26.2 bits (57), Expect = 3.6
Identities = 10/40 (25%), Positives = 14/40 (35%)
Query: 207 KKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKK 246
K K +K KK+ E K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 25.4 bits (55), Expect = 6.3
Identities = 8/40 (20%), Positives = 14/40 (35%)
Query: 215 KKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKK 254
K K +K +K+ + K K E +K +
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 25.0 bits (54), Expect = 7.0
Identities = 10/38 (26%), Positives = 14/38 (36%)
Query: 211 KKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKK 248
K K +K +K+ E K K + EK K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKL 45
>d1ge9a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Aquifex
aeolicus [TaxId: 63363]}
Length = 184
Score = 26.8 bits (59), Expect = 2.3
Identities = 15/72 (20%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 195 EEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKK--KKEEK 252
EE +E + K E+ + + + +++ K+ ++ + + EKK+ + +K K
Sbjct: 109 EERRRELVRLLHKITEEARVRVRNVRREAKEMIEELEGISEDEKKRALERLQKLTDKYID 168
Query: 253 KKEKKKKKKKKE 264
+ K + K+KE
Sbjct: 169 EINKLMEAKEKE 180
Score = 26.1 bits (57), Expect = 3.9
Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 165 CGDNLEYGYKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEK---KKEKKKEKKKEKKK 221
E + RR+ + + + E+E+K ++ +K K + K E K+
Sbjct: 119 LHKITEEARVRVRNVRREAKEMIEELEGISEDEKKRALERLQKLTDKYIDEINKLMEAKE 178
Query: 222 KE 223
KE
Sbjct: 179 KE 180
Score = 25.7 bits (56), Expect = 4.7
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 181 RKQRRRKRKRKRKKEEEEKEEEKKEEKKKEK---KKEKKKEKKKKEKKKE 227
R RR ++ + E ++E+K+ ++ +K K + K + K+KE
Sbjct: 131 RNVRREAKEMIEELEGISEDEKKRALERLQKLTDKYIDEINKLMEAKEKE 180
Score = 25.3 bits (55), Expect = 7.1
Identities = 13/69 (18%), Positives = 35/69 (50%)
Query: 188 RKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKK 247
R+R+ + + EE + + +++ K+ ++ + +++KK+ ++ +K K +
Sbjct: 111 RRRELVRLLHKITEEARVRVRNVRREAKEMIEELEGISEDEKKRALERLQKLTDKYIDEI 170
Query: 248 KKEEKKKEK 256
K + KEK
Sbjct: 171 NKLMEAKEK 179
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I,
dispensable insert domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 72
Score = 25.5 bits (56), Expect = 2.3
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 207 KKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKK 266
+ K K+++ +++ K K K K K KK E KKK ++ +E+ K + +
Sbjct: 8 QTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATD 67
Query: 267 K 267
+
Sbjct: 68 R 68
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional)
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 368
Score = 27.2 bits (59), Expect = 2.4
Identities = 6/34 (17%), Positives = 16/34 (47%)
Query: 196 EEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKK 229
+ EE + +++ + E KE+ + + K+
Sbjct: 2 RQRTEELLRCNEQQAAELETCKEQLFQSNMERKE 35
>d1giqa1 d.166.1.1 (A:3-209) Enzymatic component (Ia) of iota-toxin
{Clostridium perfringens [TaxId: 1502]}
Length = 207
Score = 26.7 bits (59), Expect = 2.6
Identities = 14/75 (18%), Positives = 35/75 (46%)
Query: 193 KKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEK 252
K++E + +K+E ++ +K EK+ E K+ ++ + ++ + + + +
Sbjct: 8 LKDKENAIQWEKKEAERVEKNLDTLEKEALELYKKDSEQISNYSQTRQYFYDYQIESNPR 67
Query: 253 KKEKKKKKKKKEKKK 267
+KE K + K K
Sbjct: 68 EKEYKNLRNAISKNK 82
Score = 25.2 bits (55), Expect = 8.3
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 196 EEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKE-KKKKKKKKKEKKKKKKEKKKKKEEKKK 254
++KE + EKK+ ++ EK + +KE + KK ++ + ++ + E +
Sbjct: 8 LKDKENAIQWEKKEAERVEKNLDTLEKEALELYKKDSEQISNYSQTRQYFYDYQIESNPR 67
Query: 255 EKKKKKKKKEKKKKK 269
EK+ K + K K
Sbjct: 68 EKEYKNLRNAISKNK 82
>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein
TCTP (histamine-releasing factor) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 172
Score = 26.6 bits (59), Expect = 2.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 203 KKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKK 249
K+ KK K K + K +E++ E+ K ++ K K
Sbjct: 85 KEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKN 131
Score = 25.8 bits (57), Expect = 5.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 231 KKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKD 270
K+ KK K K K K EE++ E+ K ++ K
Sbjct: 85 KEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKH 124
Score = 25.4 bits (56), Expect = 6.9
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 230 KKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKK 269
K+ KK K K K K +E++ + K ++ K
Sbjct: 85 KEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKH 124
>d1d7qa_ b.40.4.5 (A:) Translation initiation factor-1a, eIF1a
{Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 26.4 bits (58), Expect = 3.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 222 KEKKKEKKKKKKKKKEKKKKKKEKKKKKE 250
K K K K +++ K E + +K+E K++
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
>d2h9fa2 d.21.1.4 (A:187-395) Hypothetical protein PA0793
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 209
Score = 26.4 bits (58), Expect = 3.0
Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 55 ADHMASVGRG-AAESIAECQHQFRHHRWNCSSGGPGAGGGGGGKSESTTAPSVLPPTLHI 113
D+ + G+ AA I + + + G A G + T ++
Sbjct: 99 RDYRTASGKLVAAGDIDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAG--GG 156
Query: 114 GSREAAFTHAIATAGVVYAVARSCKDGSLPSCGCSRTARP 153
F H T V +++ + ++ SR+AR
Sbjct: 157 ERSAVRFGHPSGTLRVGAEASQANGEWTVTKAIMSRSARI 196
>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 86
Score = 25.2 bits (55), Expect = 3.2
Identities = 11/72 (15%), Positives = 27/72 (37%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKK 236
K+ R ++ + ++E+ K + +K+++ + +
Sbjct: 15 KEMRANVVAESTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD 74
Query: 237 EKKKKKKEKKKK 248
KKKK K++K
Sbjct: 75 NYGKKKKRKREK 86
Score = 24.4 bits (53), Expect = 6.8
Identities = 9/73 (12%), Positives = 29/73 (39%)
Query: 184 RRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKK 243
+ R + ++ + + ++E+ K + K+++ + +
Sbjct: 14 MKEMRANVVAESTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 73
Query: 244 EKKKKKEEKKKEK 256
+ KK+++K+EK
Sbjct: 74 DNYGKKKKRKREK 86
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 26.9 bits (58), Expect = 3.3
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 190 RKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKK 233
R + K EE+ E K+ E++++ K + + +K++ + +
Sbjct: 4 RLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDES 47
Score = 25.7 bits (55), Expect = 7.6
Identities = 7/44 (15%), Positives = 20/44 (45%)
Query: 188 RKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKK 231
R + + EE+ + + + E+K + + + +K + E +
Sbjct: 4 RLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDES 47
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 26.5 bits (58), Expect = 3.4
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 217 KEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKE 250
K+ + +K++ K K+ + EK E
Sbjct: 208 KDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIE 241
Score = 25.4 bits (55), Expect = 8.5
Identities = 5/34 (14%), Positives = 14/34 (41%)
Query: 222 KEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKE 255
K+ + +K++ K K+ + ++ E
Sbjct: 208 KDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIE 241
>d2j01t1 b.34.5.6 (T:1-138) Ribosomal protein L19 {Thermus
thermophilus [TaxId: 274]}
Length = 138
Score = 25.7 bits (56), Expect = 3.7
Identities = 7/32 (21%), Positives = 20/32 (62%)
Query: 180 RRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEK 211
++ RRK + RK+ ++++ E+ +++ +K
Sbjct: 106 SDREIRRKLRADRKRIDQDRAAERAAKEEAQK 137
Score = 25.3 bits (55), Expect = 5.2
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 176 GKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKK 209
++ RRK R RKR ++ E KEE +K
Sbjct: 107 DREIRRKLR---ADRKRIDQDRAAERAAKEEAQK 137
Score = 25.3 bits (55), Expect = 5.5
Identities = 4/35 (11%), Positives = 19/35 (54%)
Query: 226 KEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKK 260
+ ++ ++K + +K+ + + E+ +++ +K
Sbjct: 103 RNLSDREIRRKLRADRKRIDQDRAAERAAKEEAQK 137
>d1v3ya_ d.167.1.1 (A:) Peptide deformylase {Thermus thermophilus
[TaxId: 274]}
Length = 182
Score = 25.9 bits (56), Expect = 4.2
Identities = 4/22 (18%), Positives = 11/22 (50%)
Query: 216 KKEKKKKEKKKEKKKKKKKKKE 237
K K++ + + + + +KE
Sbjct: 160 PKPKREAFLEANRAELVRFQKE 181
>d1vqoc1 c.22.1.1 (C:1-246) Ribosomal protein L4 {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 246
Score = 25.9 bits (56), Expect = 4.8
Identities = 10/102 (9%), Positives = 24/102 (23%)
Query: 171 YGYKGGKKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKK 230
KER+ R + + + + E K ++
Sbjct: 98 RSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLL 157
Query: 231 KKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEG 272
+ + E K K + +K ++ +
Sbjct: 158 EALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDE 199
>d1wkca_ c.124.1.6 (A:) Hypothetical protein TTHA1611 {Thermus
thermophilus [TaxId: 274]}
Length = 175
Score = 25.6 bits (55), Expect = 5.2
Identities = 7/36 (19%), Positives = 12/36 (33%)
Query: 177 KKERRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKK 212
K E R++ R +R K +E+
Sbjct: 3 KAELRRRARAAWRRLDLKALSRAVGAALLPWLRERG 38
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 473
Score = 26.1 bits (57), Expect = 5.4
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 193 KKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKK 225
+E EE+ + +KE + K + K
Sbjct: 360 SDDELGSEEDGFDGATAAARKEVIRNKIRAIGK 392
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS)
C-terminal domain {Thermus thermophilus [TaxId: 274]}
Length = 66
Score = 23.9 bits (52), Expect = 6.7
Identities = 10/62 (16%), Positives = 32/62 (51%)
Query: 198 EKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKK 257
E+ ++E++ KE ++ ++K ++K K+ E ++ + ++ ++ E+ +E
Sbjct: 3 EEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREAL 62
Query: 258 KK 259
+
Sbjct: 63 SQ 64
Score = 23.5 bits (51), Expect = 9.4
Identities = 9/62 (14%), Positives = 31/62 (50%)
Query: 194 KEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKK 253
+E ++E++ +E ++ ++K ++K K+ + ++ + K+ E+ ++ E
Sbjct: 3 EEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREAL 62
Query: 254 KE 255
+
Sbjct: 63 SQ 64
Score = 23.5 bits (51), Expect = 10.0
Identities = 6/54 (11%), Positives = 30/54 (55%)
Query: 216 KKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKK 269
++ ++++EK+ ++ ++ ++K ++K ++ E ++ + K+ ++ +
Sbjct: 3 EEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAE 56
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human
(Homo sapiens) [TaxId: 9606]}
Length = 294
Score = 25.6 bits (55), Expect = 6.7
Identities = 4/62 (6%), Positives = 15/62 (24%)
Query: 203 KKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKK 262
K + ++ +K K + + ++ +K+
Sbjct: 225 AHSTFSAMKANTMSNYTLLPPSLLDHRRGAFLRKGVCGDWKNHFTVAQSEAFDRAYRKQM 284
Query: 263 KE 264
+
Sbjct: 285 RG 286
>d1g7da_ a.71.1.1 (A:) Endoplasmic reticulum protein ERP29,
C-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 106
Score = 24.8 bits (54), Expect = 7.1
Identities = 16/78 (20%), Positives = 34/78 (43%)
Query: 194 KEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKK 253
K+ ++ KE KK + K K ++ ++ + + K + K + KKEE +
Sbjct: 28 KQGQDGLSGVKETDKKWASQYLKIMGKILDQGEDFPASELARISKLIENKMSEGKKEELQ 87
Query: 254 KEKKKKKKKKEKKKKKDE 271
+ ++K +K+E
Sbjct: 88 RSLNILTAFRKKGAEKEE 105
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus
pyogenes [TaxId: 1314]}
Length = 106
Score = 24.8 bits (54), Expect = 7.2
Identities = 6/56 (10%), Positives = 17/56 (30%)
Query: 184 RRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKK 239
KR K + E K + + + + ++ ++K + +
Sbjct: 51 DNIKRTEKILETYEMKLHMYSDYVVRSEIFDDMIAHYPHDEYLQEKISILTSIDNR 106
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 113
Score = 24.8 bits (53), Expect = 8.3
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 217 KEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKKDEGRRR 275
KEK K+ K K + + K+ + + E +K+ KK + +++ K + + R
Sbjct: 55 KEKAKEALGKAKDANNGNLQLRNKEVTWEVLEGEVEKEALKKIIEDQQESLNKWKSKGR 113
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980
{Cryptosporidium parvum [TaxId: 5807]}
Length = 223
Score = 25.2 bits (55), Expect = 8.6
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 244 EKKKKKEEKKKEKKKKKKKKEKKKKKDE 271
E+K +KE+ + + + K+ ++
Sbjct: 44 EEKLRKEKSLNNEFIQVIEDIKRDFEES 71
>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP
(histamine-releasing factor) {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 168
Score = 25.1 bits (55), Expect = 8.8
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 203 KKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKK 242
KK K K + + +E E+ +K KK
Sbjct: 81 KKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKK 120
Score = 24.7 bits (54), Expect = 9.3
Identities = 9/40 (22%), Positives = 13/40 (32%)
Query: 230 KKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKKKK 269
KK K K K + +E + +K KK
Sbjct: 81 KKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKK 120
>d1l8wa_ a.154.1.1 (A:) Variable surface antigen VlsE {Lyme disease
spirochete (Borrelia burgdorferi) [TaxId: 139]}
Length = 291
Score = 25.2 bits (55), Expect = 9.1
Identities = 10/63 (15%), Positives = 17/63 (26%)
Query: 208 KKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKKEEKKKEKKKKKKKKEKKK 267
K + KK K K +K K K+K + + K+
Sbjct: 11 KSDPKKSDVKTYFTTVAAKLEKTKTDLNSLPKEKSDISSTTGKPDSTGSVGTAVEGAIKE 70
Query: 268 KKD 270
+
Sbjct: 71 VSE 73
>d1j46a_ a.21.1.1 (A:) SRY {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 24.0 bits (52), Expect = 9.2
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 180 RRKQRRRKRKRKRKKEEEEKEEEKKEEKKKEKKKEKKKEKKKKEKKKEKKKKKKKKKEKK 239
R QRR+ + E ++ + K + EK ++ +K + ++K + +
Sbjct: 16 SRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYR 75
Query: 240 KKKKEKKKKK 249
++K K K
Sbjct: 76 PRRKAKMLPK 85
>d2joya1 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 96
Score = 23.9 bits (52), Expect = 9.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 215 KKKEKKKKEKKKEKKKKKKKKKEKKKKKKEKKKKK 249
KK +K E+ KKK ++ + KEK K +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIKIR 92
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.306 0.126 0.359
Gapped
Lambda K H
0.267 0.0614 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,043,148
Number of extensions: 60249
Number of successful extensions: 3757
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2120
Number of HSP's successfully gapped: 775
Length of query: 275
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 191
Effective length of database: 1,254,276
Effective search space: 239566716
Effective search space used: 239566716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 52 (24.1 bits)