Query psy17098
Match_columns 204
No_of_seqs 199 out of 317
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 21:49:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17098.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17098hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fl7_A Ephrin receptor; ATP-bi 100.0 7.9E-53 2.7E-57 397.6 12.2 163 1-195 149-319 (536)
2 2wo1_A Ephrin type-A receptor; 99.9 3.8E-23 1.3E-27 171.9 6.1 53 1-54 121-178 (185)
3 3fl7_A Ephrin receptor; ATP-bi 99.8 1.1E-20 3.6E-25 178.4 1.9 73 130-204 204-279 (536)
4 2p28_B Integrin beta-2; hybrid 88.8 0.72 2.5E-05 38.4 5.9 115 43-194 48-162 (217)
5 2gsx_A Complement receptor typ 86.1 1.4 4.8E-05 43.4 7.1 32 79-110 415-446 (951)
6 2gsx_A Complement receptor typ 79.6 2.5 8.6E-05 41.6 5.9 29 79-107 606-634 (951)
7 3k6s_B Integrin beta-2; cell r 78.0 3 0.0001 40.4 5.8 70 43-118 387-456 (687)
8 3gov_A MAsp-1; complement, ser 77.2 6.6 0.00023 29.7 6.6 33 79-111 32-70 (155)
9 2q7z_A Complement receptor typ 75.3 5.7 0.00019 42.4 7.5 28 79-106 1181-1208(1931)
10 2gy5_A Angiopoietin-1 receptor 75.2 3 0.0001 37.8 4.7 31 100-138 255-286 (423)
11 2gy5_A Angiopoietin-1 receptor 73.4 2.9 0.0001 37.8 4.2 34 97-138 205-239 (423)
12 1klo_A Laminin; glycoprotein; 71.3 2.7 9.1E-05 32.9 3.0 28 106-141 73-101 (162)
13 1gkg_A Complement receptor typ 69.1 16 0.00056 26.9 6.9 32 79-110 30-64 (136)
14 1ly2_A CD21, complement recept 68.0 13 0.00043 27.1 6.0 33 79-111 28-64 (130)
15 3r62_A H factor 1, complement 66.6 8.4 0.00029 28.2 4.8 30 79-110 32-61 (129)
16 4aqs_A Laminin subunit beta-1; 65.1 1.6 5.4E-05 40.2 0.5 27 106-140 458-484 (525)
17 2a55_A C4B-binding protein; co 63.8 13 0.00043 27.7 5.4 86 80-189 31-124 (133)
18 1gkn_A Complement receptor typ 63.7 11 0.00038 27.6 5.0 87 79-189 32-125 (128)
19 3erb_A Complement C2; C3/C5 co 62.3 9.7 0.00033 30.6 4.8 90 79-189 93-185 (223)
20 3hrz_D Complement factor B; se 59.1 9.6 0.00033 35.7 4.7 90 79-189 102-194 (741)
21 2l27_A Seven transmembrane hel 58.5 9.5 0.00033 27.1 3.6 48 130-183 18-71 (84)
22 1qub_A Protein (human BETA2-gl 58.4 14 0.00048 31.5 5.3 87 79-188 28-118 (319)
23 3hrz_D Complement factor B; se 58.2 15 0.0005 34.4 5.8 28 79-106 33-60 (741)
24 3o8e_B Membrane cofactor prote 57.1 26 0.00089 28.5 6.6 32 79-110 153-189 (252)
25 3erb_A Complement C2; C3/C5 co 55.9 25 0.00086 28.1 6.2 27 79-106 27-53 (223)
26 2aty_A Complement receptor chi 54.9 31 0.0011 29.4 7.0 32 79-110 28-63 (376)
27 1du3_A Death receptor 5; trail 54.1 7.3 0.00025 29.5 2.5 26 111-140 27-53 (130)
28 1qub_A Protein (human BETA2-gl 53.7 24 0.00081 30.0 6.0 32 79-110 87-118 (319)
29 4ers_A GL-R, glucagon receptor 53.0 4.6 0.00016 29.6 1.1 48 130-183 29-81 (96)
30 1klo_A Laminin; glycoprotein; 52.7 3.2 0.00011 32.5 0.2 29 105-141 128-156 (162)
31 2yby_A Complement factor H; im 49.9 45 0.0015 24.1 6.3 30 79-110 33-65 (124)
32 3sw0_X H factor 1, complement 48.7 25 0.00084 27.3 4.9 26 79-105 91-116 (188)
33 2qy0_A Complement C1R subcompo 46.9 51 0.0017 24.8 6.4 32 79-110 30-67 (159)
34 3fcs_B Integrin beta-3; beta p 45.9 30 0.001 33.4 5.9 73 42-118 394-468 (690)
35 3etp_A Ephrin type-B receptor 45.4 3.7 0.00013 33.8 -0.4 9 1-10 128-136 (187)
36 2bz6_L Blood coagulation facto 45.4 7.7 0.00026 24.8 1.2 18 186-203 21-38 (53)
37 1ntl_A CRRY-IG; immunology, co 45.1 54 0.0018 29.7 7.3 31 158-188 286-316 (551)
38 1kig_L Factor XA; glycoprotein 44.9 7.9 0.00027 24.5 1.2 20 184-203 17-36 (51)
39 1apq_A Complement protease C1R 43.7 7.2 0.00024 24.2 0.8 20 184-203 31-50 (53)
40 4dlo_A Brain-specific angiogen 43.6 8.6 0.00029 34.1 1.6 53 130-190 18-75 (382)
41 2hey_R Tumor necrosis factor r 43.3 9.9 0.00034 29.0 1.7 33 107-140 80-112 (146)
42 2jkh_L Factor X light chain; p 43.0 8.6 0.00029 24.6 1.1 20 184-203 20-39 (55)
43 2wph_E Coagulation factor IXA 42.0 9.3 0.00032 25.0 1.2 19 185-203 20-38 (59)
44 2l27_A Seven transmembrane hel 41.0 11 0.00037 26.8 1.5 47 53-105 19-71 (84)
45 3fcs_B Integrin beta-3; beta p 39.6 19 0.00066 34.7 3.5 20 96-117 535-554 (690)
46 3t5o_A Complement component C6 39.6 64 0.0022 31.8 7.3 32 79-110 647-678 (913)
47 1srz_A Gamma-aminobutyric acid 39.4 32 0.0011 22.3 3.6 31 79-110 35-65 (68)
48 3v65_B Low-density lipoprotein 39.1 13 0.00045 32.1 2.0 20 184-203 62-81 (386)
49 4dlq_A Latrophilin-1; GAIN dom 37.0 12 0.0004 33.1 1.4 52 130-189 22-77 (381)
50 2xrb_A Complement regulatory p 36.9 69 0.0024 26.7 6.2 32 79-110 186-227 (290)
51 4dlo_A Brain-specific angiogen 36.8 8.5 0.00029 34.2 0.4 56 49-112 15-75 (382)
52 1h03_P Complement decay-accele 36.5 98 0.0033 22.0 6.3 32 79-110 26-60 (125)
53 2yra_A Seizure 6-like protein 35.8 23 0.00078 23.4 2.4 32 79-110 32-63 (74)
54 1kli_L Factor VIIA; extrinsic 35.1 14 0.00046 25.1 1.2 18 186-203 27-44 (69)
55 3c5t_A Glucagon-like peptide 1 35.0 18 0.00062 27.3 2.0 48 130-183 37-89 (122)
56 1u34_A CRFR2B, corticotropin r 34.9 30 0.001 26.2 3.2 47 131-183 45-97 (119)
57 3zyj_B Netrin-G1; cell adhesio 34.6 17 0.00058 33.3 2.1 30 108-145 313-342 (426)
58 1ntj_A Complement receptor rel 34.3 95 0.0032 26.0 6.7 32 79-110 153-194 (320)
59 1ntj_A Complement receptor rel 34.2 88 0.003 26.2 6.5 32 79-110 224-255 (320)
60 2wii_C H factor 1, complement 33.9 75 0.0026 26.2 5.9 31 79-110 97-128 (277)
61 1ly2_A CD21, complement recept 33.2 41 0.0014 24.2 3.7 32 79-110 95-127 (130)
62 2q7z_A Complement receptor typ 31.9 56 0.0019 34.9 5.7 88 79-189 1832-1925(1931)
63 1sg1_X Tumor necrosis factor r 31.8 16 0.00054 28.2 1.2 30 108-138 77-106 (161)
64 2wii_C H factor 1, complement 31.5 93 0.0032 25.7 6.1 32 79-110 161-192 (277)
65 1rid_A Complement control prot 31.5 64 0.0022 26.1 5.0 85 82-189 156-243 (244)
66 2p28_B Integrin beta-2; hybrid 31.2 37 0.0013 27.9 3.4 39 155-195 78-116 (217)
67 4aqs_A Laminin subunit beta-1; 30.4 25 0.00087 32.0 2.5 25 108-140 407-431 (525)
68 2ehf_A CUB and sushi domain-co 30.3 26 0.0009 23.0 2.0 32 79-110 36-67 (73)
69 2qkh_A Glucose-dependent insul 30.3 25 0.00084 27.2 2.1 47 130-182 56-107 (135)
70 2ygo_A WIF-1, WNT inhibitory f 30.0 27 0.00093 28.6 2.4 26 174-204 154-179 (188)
71 3tvj_A Mannan-binding lectin s 29.7 62 0.0021 21.9 4.0 27 79-105 34-62 (86)
72 3o8e_B Membrane cofactor prote 29.1 86 0.003 25.3 5.4 32 79-110 26-60 (252)
73 2xdg_A Growth hormone-releasin 29.1 33 0.0011 24.5 2.4 46 130-182 22-71 (92)
74 3p5b_L Low density lipoprotein 28.6 50 0.0017 28.6 4.1 19 185-203 59-77 (400)
75 1ntl_A CRRY-IG; immunology, co 28.4 1.3E+02 0.0044 27.1 6.9 32 79-110 151-192 (551)
76 3sw0_X H factor 1, complement 28.3 2E+02 0.0067 21.9 8.2 26 79-105 30-55 (188)
77 1edm_B Factor IX; epidermal gr 27.3 37 0.0013 19.5 2.1 11 185-195 23-33 (39)
78 1ok3_A CD55, CR, DAF, compleme 26.8 92 0.0031 25.2 5.2 32 79-110 93-126 (254)
79 4fhq_A Tumor necrosis factor r 25.2 34 0.0012 26.0 2.1 43 96-140 5-50 (134)
80 3iyp_F Complement decay-accele 25.2 92 0.0031 27.4 5.2 33 79-111 125-159 (381)
81 2uwi_A CRME protein; receptor, 25.1 16 0.00053 28.1 0.1 9 130-138 125-133 (142)
82 2y38_A Laminin subunit alpha-5 24.6 41 0.0014 30.4 2.8 31 108-146 286-316 (403)
83 1nzi_A Complement C1S componen 23.9 23 0.00079 26.5 0.8 20 185-204 138-157 (159)
84 4aqt_A Laminin subunit gamma-1 23.7 46 0.0016 29.7 2.9 65 108-204 272-349 (375)
85 2uwn_A H factor 1, human compl 23.6 2E+02 0.007 21.9 6.5 30 79-110 93-123 (187)
86 1lmj_A Fibrillin 1; EGF, calci 23.5 28 0.00096 23.7 1.2 20 184-203 66-85 (86)
87 2x57_A Vasoactive intestinal p 22.7 40 0.0014 25.3 2.0 46 130-182 48-97 (116)
88 2jod_A Pituitary adenylate cyc 22.4 55 0.0019 23.9 2.7 46 130-182 36-87 (106)
89 1szb_A Mannose binding lectin- 22.1 26 0.00089 26.7 0.8 20 185-204 147-166 (170)
90 3n7s_A Calcitonin gene-related 21.5 35 0.0012 25.6 1.4 48 130-183 45-95 (115)
91 1uzk_A Fibrillin-1; glycoprote 20.7 35 0.0012 25.8 1.3 22 183-204 141-162 (162)
No 1
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=100.00 E-value=7.9e-53 Score=397.55 Aligned_cols=163 Identities=35% Similarity=0.743 Sum_probs=139.3
Q ss_pred CccCCCCCcCCC----CceeeeeEEEEe-ecCCCceEEEeccCCceEeEEEEEEEEecChhhhhccccCCCCCCCCCccc
Q psy17098 1 RIAAGEGRFNTN----TEVNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKVYYITCPETTINFAHFPTTPTGREVTF 75 (204)
Q Consensus 1 tiAade~~f~~~----~~~~~N~e~r~~-pls~~GfYlAfqD~GaCval~sVrVyy~~CP~~~~~la~Fp~T~ag~~~~s 75 (204)
||||||+ |++. +.||||||+|+| ||||+||||||||+||||||+|||||||+||+++++||.||+|++|++.++
T Consensus 149 tiaade~-~~~~~~~~~~~~~n~e~~~~~~~~~~g~ylafqd~gac~~l~svrv~y~~C~~~~~~la~fp~t~~~~~~~~ 227 (536)
T 3fl7_A 149 TIAPDEI-TVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIGACVALLSVRVYYKKCPELLQGLAHFPETIAGSDAPS 227 (536)
T ss_dssp EECCSSC-BCC------CCCCEEEEEEECCCCSSEEEEEEEESSCEEEEEEEEEEEEEECCEEETTEEECCEECCSSTTC
T ss_pred EEeCCCc-cccccccccceeeeEEEEeecccccceEEEEeccCCceEEEEEEEEEEEeChHHhhccccCCCcCCCccccc
Confidence 7999998 7763 248999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eEeEEeEEccCcee---cCCCceEEeccceEEeeccceeecCCcccccccccccCCcccCCccccccccCCCCCCCCcee
Q psy17098 76 IEQATGRCVENAEE---VGTPTYLCKGDGKWYLPSGGCKCKPGFEADVEKQTCNGTCHACPETTINFAHFPTTPTGREVT 152 (204)
Q Consensus 76 lv~v~G~CV~~A~~---~~~P~~~C~~~G~W~~p~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A~Fp~T~~g~~~~ 152 (204)
||+|+|+||+||++ ...|+|||++||+|++|+|+|.|++|||.+ +..| ++||+|+||... |.
T Consensus 228 l~~v~G~Cv~~a~~~~~~~~p~~~C~~dG~w~~p~G~C~C~~G~e~~--~~~C----~aC~~g~~k~~~------~~--- 292 (536)
T 3fl7_A 228 LATVAGTCVDHAVVPPGGEEPRMHCAVDGEWLVPIGQCLCQAGYEKV--EDAC----QACSPGFFKFEA------SE--- 292 (536)
T ss_dssp CEEEECEECTTEECCC--CCCEEEECTTSCBCCCBCCCEECTTEEEE--TTEE----EECCTTEECCSC------CS---
T ss_pred eEEEeeEECCCCCcCCCCCCceEEEcCCCCEecccCcEeccCccccC--Ccee----eecCCCCCcccC------CC---
Confidence 99999999999997 578999999999999999999999999953 3445 999999999864 22
Q ss_pred eEEeeecccccCccccCCCeEEecccCeEEccCCCeecCCCce
Q psy17098 153 FIEQATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCKCKPGFE 195 (204)
Q Consensus 153 slv~v~G~CV~na~~~~~P~~~C~~~G~W~vp~g~C~C~~Gye 195 (204)
.....|.+|+..... ....|.|..||.
T Consensus 293 ---~~C~~CP~~S~s~~~-------------Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 293 ---SPCLECPEHTLPSPE-------------GATSCECEEGFF 319 (536)
T ss_dssp ---SCCEECCSSEECCCT-------------TCSSCEECTTCB
T ss_pred ---CccccCCCCCCCCCC-------------CccEEEEecccc
Confidence 124567777753322 345677777775
No 2
>2wo1_A Ephrin type-A receptor; glycoprotein, AXON guidance, vascular development, cell SURF receptor, transferase, cell signaling; 1.85A {Homo sapiens} PDB: 2wo2_A* 2wo3_A* 3ckh_A 3gxu_A 3nru_A
Probab=99.87 E-value=3.8e-23 Score=171.88 Aligned_cols=53 Identities=43% Similarity=0.877 Sum_probs=48.6
Q ss_pred CccCCCCCcCCCC----ceeeeeEEEEe-ecCCCceEEEeccCCceEeEEEEEEEEecC
Q psy17098 1 RIAAGEGRFNTNT----EVNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKVYYITC 54 (204)
Q Consensus 1 tiAade~~f~~~~----~~~~N~e~r~~-pls~~GfYlAfqD~GaCval~sVrVyy~~C 54 (204)
||||||+ |++.+ .+++|||+|+| ||||+||||||||+||||||+|||||||+=
T Consensus 121 TIAAde~-F~~~~~~~~~~~~Nte~r~igplsk~GfYLAFqD~GAC~aL~sVrVyYk~~ 178 (185)
T 2wo1_A 121 TIAADES-FTQVDIGDRIMKLNTEIRDVGPLSKKGFYLAFQDVGACIALVSVRVFYKRT 178 (185)
T ss_dssp EEECCSC-EEEEC--CCCEEEEEEEEEECCCCSSEEEEEEEESSCEEEEEEEEEEEEEE
T ss_pred EEecCCc-ccccccccceeeeeEEEEEccccCCccEEEEEccCCcEEEEEEEEEEEEec
Confidence 7999998 87633 47899999999 999999999999999999999999999973
No 3
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.79 E-value=1.1e-20 Score=178.45 Aligned_cols=73 Identities=34% Similarity=0.810 Sum_probs=67.4
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCccc---cCCCeEEecccCeEEccCCCeecCCCceeccccCccC
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAEE---VGTPTYLCKGDGKWYLPSGGCKCKPGFEADVEKQTCN 204 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~~---~~~P~~~C~~~G~W~vp~g~C~C~~Gye~~~~~~~C~ 204 (204)
++||....+||.||+|++|+++++||+|.|+||+||++ .+.|+|||++||+|+||+|+|.|++|||. .++.|+
T Consensus 204 ~~C~~~~~~la~fp~t~~~~~~~~l~~v~G~Cv~~a~~~~~~~~p~~~C~~dG~w~~p~G~C~C~~G~e~--~~~~C~ 279 (536)
T 3fl7_A 204 KKCPELLQGLAHFPETIAGSDAPSLATVAGTCVDHAVVPPGGEEPRMHCAVDGEWLVPIGQCLCQAGYEK--VEDACQ 279 (536)
T ss_dssp EEECCEEETTEEECCEECCSSTTCCEEEECEECTTEECCC--CCCEEEECTTSCBCCCBCCCEECTTEEE--ETTEEE
T ss_pred EeChHHhhccccCCCcCCCccccceEEEeeEECCCCCcCCCCCCceEEEcCCCCEecccCcEeccCcccc--CCceee
Confidence 79999999999999999999999999999999999996 57899999999999999999999999994 566664
No 4
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=88.78 E-value=0.72 Score=38.38 Aligned_cols=115 Identities=22% Similarity=0.460 Sum_probs=65.2
Q ss_pred eEEEEEEEEecChhhhhccccCCCCCCCCCccceEeEEeEEccCceecCCCceEEeccceEEeeccceeecCCccccccc
Q psy17098 43 SLLAIKVYYITCPETTINFAHFPTTPTGREVTFIEQATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCKCKPGFEADVEK 122 (204)
Q Consensus 43 al~sVrVyy~~CP~~~~~la~Fp~T~ag~~~~slv~v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C~C~~Gye~~~~~ 122 (204)
....|+|--+.||.. +.|...|.... ....+.+.-.|-=.-.........|+..|.-. .|.|.|.+||..
T Consensus 48 v~F~v~v~~~~Cp~~-~~~~i~p~g~~---e~l~i~~~~~C~C~C~~~~~~~~~Csg~G~C~--~g~C~C~~G~~G---- 117 (217)
T 2p28_B 48 ITFQVKVTATECIQE-QSFVIRALGFT---DIVTVQVLPQCECRCRDQSRDRSLCHGKGFLE--CGICRCDTGYIG---- 117 (217)
T ss_dssp EEEEEEEEESSCCCS-EEEEEEETTCS---CEEEEEEEECCCCCCCCCCC--CTTTTSEEEE--TTEEEECTTEES----
T ss_pred EEEEEEEEeCCCCCC-CceEeeccCCc---ceEEEEecccccCCCCCCCCCCCccCCCceEE--CCEEECCCCccC----
Confidence 356788888899976 45555554443 23445566656533222233445688888765 489999999983
Q ss_pred ccccCCcccCCccccccccCCCCCCCCceeeEEeeecccccCccccCCCeEEecccCeEEccCCCeecCCCc
Q psy17098 123 QTCNGTCHACPETTINFAHFPTTPTGREVTFIEQATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCKCKPGF 194 (204)
Q Consensus 123 ~~C~~~C~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~~~~~P~~~C~~~G~W~vp~g~C~C~~Gy 194 (204)
..| + ||.+.+... ...+.|.... ....|+..|.=. .|.|.|.+||
T Consensus 118 ~~C----e-c~~~~~~~~---------------~~~~~C~~~~-----~~~~Csg~G~C~--~g~C~C~~gw 162 (217)
T 2p28_B 118 KNC----E-CQTQGRSSQ---------------ELEGSCRKDN-----NSIICSGLGDCV--CGQCLCHTSD 162 (217)
T ss_dssp TTS----C-EECCCCC-G---------------GGGGGGBSST-----TSCBGGGTEEEE--TTEEEECCCC
T ss_pred Ccc----c-ccCcccccc---------------cCCCcCCCCC-----CCCCCCCCCEEe--CCceECCCCC
Confidence 345 4 554332110 0135665421 112266666544 4789999994
No 5
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=86.10 E-value=1.4 Score=43.39 Aligned_cols=32 Identities=25% Similarity=0.533 Sum_probs=22.3
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=.......+.|+.+|+|..+.-.|
T Consensus 415 v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~p~C 446 (951)
T 2gsx_A 415 IKYSCNPGYVLVGEESIQCTSEGVWTPPVPQC 446 (951)
T ss_pred EEEEcCCCCEECCCCCeEECCCCcCCCCCCcc
Confidence 34466655444456789999999998766555
No 6
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=79.58 E-value=2.5 Score=41.60 Aligned_cols=29 Identities=24% Similarity=0.426 Sum_probs=20.3
Q ss_pred EEeEEccCceecCCCceEEeccceEEeec
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPS 107 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~ 107 (204)
|.=+|-++=.........|++||+|..+.
T Consensus 606 v~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~ 634 (951)
T 2gsx_A 606 VTFKCYSGFTLKGSSQIRCKADNTWDPEI 634 (951)
T ss_pred EEEEeCCCCEEcCCCceEECCCCCCCCCC
Confidence 44456555555566789999999998543
No 7
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=78.00 E-value=3 Score=40.38 Aligned_cols=70 Identities=21% Similarity=0.383 Sum_probs=41.6
Q ss_pred eEEEEEEEEecChhhhhccccCCCCCCCCCccceEeEEeEEccCceecCCCceEEeccceEEeeccceeecCCccc
Q psy17098 43 SLLAIKVYYITCPETTINFAHFPTTPTGREVTFIEQATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCKCKPGFEA 118 (204)
Q Consensus 43 al~sVrVyy~~CP~~~~~la~Fp~T~ag~~~~slv~v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C~C~~Gye~ 118 (204)
....|.|=-+.||. ...+...| .|-.....+.+.-.|-=.=.......-.|+.+|... .|.|.|.+||..
T Consensus 387 v~F~v~v~~~~Cp~-~~~~~i~p---~Gf~~~~~v~~~~~C~C~C~~~~~~s~~Cs~~G~C~--~g~C~C~~Gy~G 456 (687)
T 3k6s_B 387 ITFQVKVTATECIQ-EQSFVIRA---LGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLE--CGICRCDTGYIG 456 (687)
T ss_dssp EEEEEEEEESSCCC-SEEEEBCC---TTCCCCCEEEEEECCCCCCCCSSSCSSTGGGSEEES--SSSEEECSSEES
T ss_pred EEEEEEEEEecCCC-CCeEEEcc---ccCCCceeccccccccccCccCCCCCCCCCCCCEEe--CCEeEcCCCCcC
Confidence 34677888899996 23333333 332233445666666422111111344688888765 689999999983
No 8
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=77.20 E-value=6.6 Score=29.68 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=22.4
Q ss_pred EEeEEccCceecCCC------ceEEeccceEEeecccee
Q psy17098 79 ATGRCVENAEEVGTP------TYLCKGDGKWYLPSGGCK 111 (204)
Q Consensus 79 v~G~CV~~A~~~~~P------~~~C~~~G~W~~p~g~C~ 111 (204)
+.=+|-.+=...... .+.|..||+|..+.-.|.
T Consensus 32 v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~ 70 (155)
T 3gov_A 32 VLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCK 70 (155)
T ss_dssp EEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEE
T ss_pred EEEECCCCcEEccCccccceeEEEECCCCeEcCCCCeee
Confidence 455787666543333 799999999986655554
No 9
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=75.35 E-value=5.7 Score=42.40 Aligned_cols=28 Identities=18% Similarity=0.400 Sum_probs=19.4
Q ss_pred EEeEEccCceecCCCceEEeccceEEee
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLP 106 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p 106 (204)
|.=+|-++=.......+.|+++|.|.-+
T Consensus 1181 ~~~~C~~Gy~l~G~~~~~C~~~G~Ws~~ 1208 (1931)
T 2q7z_A 1181 VFYSCEPGYDLRGAASLHCTPQGDWSPE 1208 (1931)
T ss_pred EEEECCCCCEeCCCceeEEcCCCeECCC
Confidence 4456665544445678899999999843
No 10
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=75.24 E-value=3 Score=37.78 Aligned_cols=31 Identities=19% Similarity=0.449 Sum_probs=21.6
Q ss_pred cceEEeeccceeecCCcccccccccccCCccc-CCccccc
Q psy17098 100 DGKWYLPSGGCKCKPGFEADVEKQTCNGTCHA-CPETTIN 138 (204)
Q Consensus 100 ~G~W~~p~g~C~C~~Gye~~~~~~~C~~~C~~-Cp~g~~k 138 (204)
.|.-....+.|.|.+||.. ..| +. |+++++.
T Consensus 255 ~g~C~~~~~~C~C~~G~~G----~~C----~~~C~~G~~G 286 (423)
T 2gy5_A 255 YVFCLPDPYGCSCATGWKG----LQC----NEACHPGFYG 286 (423)
T ss_dssp CCEEETTTTEEECCBTCBS----GGG----CBCCCTTBCS
T ss_pred CCEECCCCCeEEeCCCccc----ccc----cCccCCCCcC
Confidence 3444445689999999983 345 64 9888875
No 11
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=73.41 E-value=2.9 Score=37.83 Aligned_cols=34 Identities=35% Similarity=0.838 Sum_probs=19.2
Q ss_pred EeccceEEeeccceeecCCcccccccccccCCccc-CCccccc
Q psy17098 97 CKGDGKWYLPSGGCKCKPGFEADVEKQTCNGTCHA-CPETTIN 138 (204)
Q Consensus 97 C~~~G~W~~p~g~C~C~~Gye~~~~~~~C~~~C~~-Cp~g~~k 138 (204)
|...|.=....+.|.|.+||.. ..| +. |+++++.
T Consensus 205 C~~~G~C~~~~g~C~C~~G~~G----~~C----e~~C~~g~~g 239 (423)
T 2gy5_A 205 CMNNGVCHEDTGECICPPGFMG----RTC----EKACELHTFG 239 (423)
T ss_dssp CCTTCEECTTTCCEECCTTEES----TTS----CEECCTTEES
T ss_pred CCCCCEEECCCCcEeCCCCccC----CCc----ccccCCCCCC
Confidence 4444443223577888888873 234 53 7766653
No 12
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=71.33 E-value=2.7 Score=32.91 Aligned_cols=28 Identities=21% Similarity=0.407 Sum_probs=22.1
Q ss_pred ecccee-ecCCcccccccccccCCcccCCcccccccc
Q psy17098 106 PSGGCK-CKPGFEADVEKQTCNGTCHACPETTINFAH 141 (204)
Q Consensus 106 p~g~C~-C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A~ 141 (204)
..|.|. |++||+. .. |..|++++|..+.
T Consensus 73 ~tG~C~~C~~g~~G----~~----Ce~C~~Gy~g~~~ 101 (162)
T 1klo_A 73 LTGECLKCIYNTAG----FY----CDRCKEGFFGNPL 101 (162)
T ss_dssp TTCCBCCBCTTEET----TT----TCEECTTEEECTT
T ss_pred CCCcccCCCCCCcC----CC----cCcCchhhcCCcc
Confidence 468995 9999983 33 4899999998774
No 13
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=69.13 E-value=16 Score=26.90 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=24.1
Q ss_pred EEeEEccCceecCCCceEEeccce---EEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGK---WYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~---W~~p~g~C 110 (204)
+.=+|-++-.......+.|..+|+ |.-+.-.|
T Consensus 30 v~y~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C 64 (136)
T 1gkg_A 30 ITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPIC 64 (136)
T ss_dssp EEEECCSSEEECSCSEEEEEECSSSEEESSCCCCE
T ss_pred EEEECCCCCeEcCCCceEEeCCCccccccCCCCCE
Confidence 455788777666678999999999 98655545
No 14
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=68.03 E-value=13 Score=27.06 Aligned_cols=33 Identities=27% Similarity=0.632 Sum_probs=24.4
Q ss_pred EEeEEccCceecCCCceEEec----cceEEeecccee
Q psy17098 79 ATGRCVENAEEVGTPTYLCKG----DGKWYLPSGGCK 111 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~----~G~W~~p~g~C~ 111 (204)
+.=+|-++=.......+.|.. ||.|.-+.-.|.
T Consensus 28 v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~ 64 (130)
T 1ly2_A 28 IRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCE 64 (130)
T ss_dssp EEEEECTTEEEESCSEEEEECSSSSSCEESSCCCEEE
T ss_pred EEEEcCCCCEEeCCCeeEEeCCCCCCCeECCCCCeeE
Confidence 556888776666678999997 899986555553
No 15
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=66.58 E-value=8.4 Score=28.20 Aligned_cols=30 Identities=20% Similarity=0.556 Sum_probs=21.9
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=.......+.|+ +|.|. +.-.|
T Consensus 32 v~y~C~~Gy~l~G~~~~~C~-~g~Ws-~~p~C 61 (129)
T 3r62_A 32 VEYQCQNLYQLEGNKRITCR-NGQWS-EPPKC 61 (129)
T ss_dssp EEEEECTTCEEESCSEEEEE-TTEEC-CCCEE
T ss_pred EEEECCCCCEeCCCCeeEcC-CCcCC-CCCCc
Confidence 56688877665566789999 99997 44333
No 16
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=65.06 E-value=1.6 Score=40.19 Aligned_cols=27 Identities=26% Similarity=0.583 Sum_probs=13.5
Q ss_pred eccceeecCCcccccccccccCCcccCCccccccc
Q psy17098 106 PSGGCKCKPGFEADVEKQTCNGTCHACPETTINFA 140 (204)
Q Consensus 106 p~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A 140 (204)
..|.|.|++||+. ..| ..|++|+|.+.
T Consensus 458 ~tg~C~C~~g~~G----~~C----e~C~~G~~g~~ 484 (525)
T 4aqs_A 458 ETGYCYCKRLVTG----QRC----DQCLPQHWGLS 484 (525)
T ss_dssp TTCCBCBCTTCCS----TTT----CC---------
T ss_pred CCCEEECCCCCcC----CCc----ccCCCCccCCC
Confidence 3578999999983 334 89999998764
No 17
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=63.83 E-value=13 Score=27.71 Aligned_cols=86 Identities=23% Similarity=0.374 Sum_probs=47.7
Q ss_pred EeEEccCc-eecCCCceEEeccceEEeeccceeecCCcccccccccccCCcccCCcc--ccccccCC--CCCCCCceeeE
Q psy17098 80 TGRCVENA-EEVGTPTYLCKGDGKWYLPSGGCKCKPGFEADVEKQTCNGTCHACPET--TINFAHFP--TTPTGREVTFI 154 (204)
Q Consensus 80 ~G~CV~~A-~~~~~P~~~C~~~G~W~~p~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g--~~k~A~Fp--~T~~g~~~~sl 154 (204)
.=+|-++= .......+.|..||+|.. .-.|. + ..|+.- ..+-.... ....|.
T Consensus 31 ~y~C~~Gy~~l~G~~~~~C~~~G~Ws~-~p~C~--~---------------~~C~~p~~~~nG~~~~~~~~~~g~----- 87 (133)
T 2a55_A 31 KYTCLPGYVRSHSTQTLTCNSDGEWVY-NTFCI--Y---------------KRCRHPGELRNGQVEIKTDLSFGS----- 87 (133)
T ss_dssp CCBCCTTEESCCSCCCCEECSSSSEEC-CCCSE--E---------------CBCCCCCCCTTBCCCCCSTTBSSC-----
T ss_pred EEEeCCCCcccCCCCEEEECCCCeECC-CCcCc--c---------------CCCcCCCccCCceEEcCCCCcCCC-----
Confidence 34787776 334577899999999986 44442 0 123221 11111111 011111
Q ss_pred EeeecccccCccccCCCeEEecccC---eEEccCCCee
Q psy17098 155 EQATGRCVENAEEVGTPTYLCKGDG---KWYLPSGGCK 189 (204)
Q Consensus 155 v~v~G~CV~na~~~~~P~~~C~~~G---~W~vp~g~C~ 189 (204)
.+.=+|-+.-.-.+...+.|..+| .|.-+.-.|.
T Consensus 88 -~v~~~C~~Gy~L~G~~~~~C~~~G~~~~Ws~~~p~C~ 124 (133)
T 2a55_A 88 -QIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCE 124 (133)
T ss_dssp -BCCCCBCTTCBCCSCSCCBCCCCSSSCCCSCCCCCCB
T ss_pred -EEEEEcCCCCEEcCCCeeEecCCCCCCEeCCCCcccc
Confidence 233456555443456789999999 8998776654
No 18
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=63.67 E-value=11 Score=27.58 Aligned_cols=87 Identities=18% Similarity=0.337 Sum_probs=48.4
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccceeecCCcccccccccccCCcccCCcc--cccccc--CCCCCCCCceeeE
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCKCKPGFEADVEKQTCNGTCHACPET--TINFAH--FPTTPTGREVTFI 154 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g--~~k~A~--Fp~T~~g~~~~sl 154 (204)
+.=+|-++= ......+.|..||.|.-+.-.|.= ..|+.- ..+-.. ......|.
T Consensus 32 ~~y~C~~Gy-l~G~~~~~C~~~g~Ws~~~p~C~~-----------------~~C~~p~~~~nG~~~~~~~~~~g~----- 88 (128)
T 1gkn_A 32 LKYECRPEY-YGRPFSITCLDNLVWSSPKDVCKR-----------------KSCKTPPDPVNGMVHVITDIQVGS----- 88 (128)
T ss_dssp EEEEECTTE-ESCCEEEEBCSSSCBCCCCSCCEE-----------------CBCCCCCCCTTEEEEESSCCBTTC-----
T ss_pred EEEEcCCCC-cCCCCceEECCCCcCCCCCCeEcc-----------------eECcCCCCCCCcEEEeccCCccCC-----
Confidence 556788777 556779999999999865544421 123221 000000 00111121
Q ss_pred EeeecccccCccccCCCeEEecccCe---EEccCCCee
Q psy17098 155 EQATGRCVENAEEVGTPTYLCKGDGK---WYLPSGGCK 189 (204)
Q Consensus 155 v~v~G~CV~na~~~~~P~~~C~~~G~---W~vp~g~C~ 189 (204)
.+.=+|-+.-.-.+.....|..+|. |.-+.-.|.
T Consensus 89 -~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~ 125 (128)
T 1gkn_A 89 -RITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQ 125 (128)
T ss_dssp -EEEEEECTTEECCSCSEEEEEECSSSEEESSCCCCCE
T ss_pred -EEEEEeCCCCEEccCCceEEcCCCCcCCccCCCCEee
Confidence 1233565554333567899999999 986655553
No 19
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=62.34 E-value=9.7 Score=30.63 Aligned_cols=90 Identities=23% Similarity=0.435 Sum_probs=47.9
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccceeecCCcccccccccccCCcccCCccc-cccccCC--CCCCCCceeeEE
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCKCKPGFEADVEKQTCNGTCHACPETT-INFAHFP--TTPTGREVTFIE 155 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~-~k~A~Fp--~T~~g~~~~slv 155 (204)
+.=+|-++-.......+.|..+|+|..+.-.|.= . . ..|+.-. -+-.... ....|.
T Consensus 93 v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~--~------~-------~~C~~p~~~~g~~~~~~~~~~g~------ 151 (223)
T 3erb_A 93 VSFECEDGFILRGSPVRQCRPNGMWDGETAVCDN--G------A-------GHCPNPGISLGAVRTGFRFGHGD------ 151 (223)
T ss_dssp EEEEECTTCEEESCSEEEBCTTSCBSSCCCEEEC--S------C-------SSSCCCCCCTTEEEECCCCSTTC------
T ss_pred EEEEeCCCCEEcCCCceEECCCCeECCCCCEEEe--C------C-------ccCcCCCCCCCcEecCCCCCCCC------
Confidence 4557777666556678999999999765544431 0 0 1232210 0000000 001111
Q ss_pred eeecccccCccccCCCeEEecccCeEEccCCCee
Q psy17098 156 QATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCK 189 (204)
Q Consensus 156 ~v~G~CV~na~~~~~P~~~C~~~G~W~vp~g~C~ 189 (204)
.+.=+|-..=.-.+..++.|..+|+|.-+.-.|.
T Consensus 152 ~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~ 185 (223)
T 3erb_A 152 KVRYRCSSNLVLTGSSERECQGNGVWSGTEPICR 185 (223)
T ss_dssp EEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEE
T ss_pred EEEEEeCCCCEEcCCCceEECCCCeECCCCCEEe
Confidence 1234565443333557899999999996655554
No 20
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=59.13 E-value=9.6 Score=35.67 Aligned_cols=90 Identities=18% Similarity=0.393 Sum_probs=48.7
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccceeecCCcccccccccccCCcccCCcccc--ccccC-CCCCCCCceeeEE
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCKCKPGFEADVEKQTCNGTCHACPETTI--NFAHF-PTTPTGREVTFIE 155 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~--k~A~F-p~T~~g~~~~slv 155 (204)
+.=+|-++=.........|+.+|+|.-+.-.|.= + ...|+.-.. +.... .....|.
T Consensus 102 ~~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C~~--~-------------~~~C~~p~~~~~~~~~~~~~~~g~------ 160 (741)
T 3hrz_D 102 ISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDN--G-------------AGYCSNPGIPIGTRKVGSQYRLED------ 160 (741)
T ss_dssp EEEEECTTCEEESCSEEEBCTTSCBSSCCCEEEC--S-------------CSSSCCCCCCTTEEEECCCCSTTC------
T ss_pred EEEEECCCCccCCCcceEecCCCeEccCcCeeec--c-------------CCcCCCCCCCCCCeeeCCccccCC------
Confidence 4567777665556788999999999866655531 0 012332100 00000 0000111
Q ss_pred eeecccccCccccCCCeEEecccCeEEccCCCee
Q psy17098 156 QATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCK 189 (204)
Q Consensus 156 ~v~G~CV~na~~~~~P~~~C~~~G~W~vp~g~C~ 189 (204)
.+.=+|-+.-.-.+.++..|..+|+|.-+.-.|.
T Consensus 161 ~v~~~C~~gy~l~G~~~~~C~~~g~Ws~~~p~C~ 194 (741)
T 3hrz_D 161 SVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQ 194 (741)
T ss_dssp EEEEEECTTSEEESCSEEEBCTTSSBSSCCCEEE
T ss_pred EEEEEcCCCCEEcCCCeEEECCCCEEeCCCcccc
Confidence 2334565544333567899999999986555443
No 21
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=58.49 E-value=9.5 Score=27.06 Aligned_cols=48 Identities=17% Similarity=0.368 Sum_probs=36.7
Q ss_pred ccCCcccccc-ccCCCCCCCCceeeEEeeecccccCcc-----ccCCCeEEecccCeEEc
Q psy17098 130 HACPETTINF-AHFPTTPTGREVTFIEQATGRCVENAE-----EVGTPTYLCKGDGKWYL 183 (204)
Q Consensus 130 ~~Cp~g~~k~-A~Fp~T~~g~~~~slv~v~G~CV~na~-----~~~~P~~~C~~~G~W~v 183 (204)
..|+..+-++ +=.|.|.+|. .|.-.|..--. ..+....+|..+|+|.-
T Consensus 18 ~~C~~~wD~~~~CWp~t~~G~------~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~ 71 (84)
T 2l27_A 18 LQCNASVDLIGTCWPRSPAGQ------LVVRPCPAFFYGVRYNTTNNGYRECLANGSWAA 71 (84)
T ss_dssp CBCCCSCSSSSCCCCCCBSSB------CCBCCCCSSBTTBCCCCSSCCBCCEETTTEECS
T ss_pred CCCCccccCccccCCCCCCCC------EEEecCchhhcCcccCcCCceecCCCCCCcCCC
Confidence 5799999999 9999999984 34677887432 12345789999999974
No 22
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=58.40 E-value=14 Score=31.48 Aligned_cols=87 Identities=21% Similarity=0.355 Sum_probs=47.9
Q ss_pred EEeEEccCceecC-CCceEEeccceEEeeccceeecCCcccccccccccCCcccCCcc--cccc-ccCCCCCCCCceeeE
Q psy17098 79 ATGRCVENAEEVG-TPTYLCKGDGKWYLPSGGCKCKPGFEADVEKQTCNGTCHACPET--TINF-AHFPTTPTGREVTFI 154 (204)
Q Consensus 79 v~G~CV~~A~~~~-~P~~~C~~~G~W~~p~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g--~~k~-A~Fp~T~~g~~~~sl 154 (204)
+.=+|-++-.... ..++.|..+|.|..+.-.|.= ..|+.- ..+- ........|.
T Consensus 28 ~~y~C~~Gy~l~g~~~~~~C~~~G~Ws~~~p~C~~-----------------~~C~~p~~~~nG~~~~~~~~~g~----- 85 (319)
T 1qub_A 28 ITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTP-----------------RVCPFAGILENGAVRYTTFEYPN----- 85 (319)
T ss_dssp EEEEECTTEEETTSCEEEECCTTSCCCCCCCCEEE-----------------CBCCCCCCCTTEEEECSCSBTTC-----
T ss_pred EEEEECCCCeEcCCCceEEECCCCEECCCCCeECc-----------------cCCcCCCCCCCccEecCCcccCC-----
Confidence 5567887766543 457899999999865544430 123211 0000 0011111121
Q ss_pred EeeecccccCccccCCCeEEecccCeEEccCCCe
Q psy17098 155 EQATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 188 (204)
Q Consensus 155 v~v~G~CV~na~~~~~P~~~C~~~G~W~vp~g~C 188 (204)
.+.=+|.+.-.-.+...+.|..+|.|.-+.-.|
T Consensus 86 -~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C 118 (319)
T 1qub_A 86 -TISFSCNTGFYLNGADSAKCTEEGKWSPELPVC 118 (319)
T ss_dssp -EEEEEECTTEEEESCSEEEECTTSCEESCCCEE
T ss_pred -EEEEECCCCceeCCCCceEECCCCeECCCCCCC
Confidence 233456655443355789999999998665555
No 23
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=58.21 E-value=15 Score=34.42 Aligned_cols=28 Identities=18% Similarity=0.287 Sum_probs=21.8
Q ss_pred EEeEEccCceecCCCceEEeccceEEee
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLP 106 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p 106 (204)
+.=+|-++-.........|..+|+|..+
T Consensus 33 ~~y~C~~Gy~l~g~~~~~C~~~g~Ws~~ 60 (741)
T 3hrz_D 33 LEYVCPSGFYPYPVQTRTCRSTGSWSTL 60 (741)
T ss_dssp EEEECCTTEEEESCSEEEBCTTSCBCCE
T ss_pred EEEEeCCCCEECCCCeEEECCCCcCCCC
Confidence 5567877766656778999999999754
No 24
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=57.10 E-value=26 Score=28.54 Aligned_cols=32 Identities=22% Similarity=0.471 Sum_probs=22.7
Q ss_pred EEeEEccC-----ceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVEN-----AEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~-----A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-.+ -.......+.|+.+|.|.-+.-.|
T Consensus 153 v~y~C~~g~~~~gy~l~G~~~~~C~~~G~Ws~~~P~C 189 (252)
T 3o8e_B 153 VTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPEC 189 (252)
T ss_dssp EEEEECCCSSSSCCEEESCSEEEBCTTSSBSSCCCEE
T ss_pred EEEEeCCCCCCCCeEEeCCCceEECCCCeECCCCCEE
Confidence 56688873 333456789999999998655555
No 25
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=55.94 E-value=25 Score=28.13 Aligned_cols=27 Identities=30% Similarity=0.598 Sum_probs=19.8
Q ss_pred EEeEEccCceecCCCceEEeccceEEee
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLP 106 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p 106 (204)
+.=+|-++-.... ..+.|..+|+|..+
T Consensus 27 ~~y~C~~Gy~l~g-~~~~C~~~G~Ws~~ 53 (223)
T 3erb_A 27 LTYSCPQGLYPSP-ASRLCKSSGQWQTP 53 (223)
T ss_dssp EEEECCTTEEEES-CEEEECTTSCEECC
T ss_pred EEEECCCCCeecC-CeeEECCCCeECCC
Confidence 5567777665433 46999999999875
No 26
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=54.93 E-value=31 Score=29.40 Aligned_cols=32 Identities=28% Similarity=0.616 Sum_probs=24.2
Q ss_pred EEeEEccCceecCCCceEEe----ccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCK----GDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~----~~G~W~~p~g~C 110 (204)
+.=+|-++=.......+.|. .+|.|.-+.-.|
T Consensus 28 ~~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C 63 (376)
T 2aty_A 28 IRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKC 63 (376)
T ss_pred EEEEeCCCCEEcCCCceEEeccCCCCCeECCCCCcc
Confidence 45688887766667789999 899998665544
No 27
>1du3_A Death receptor 5; trail, DR5, complex; 2.20A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1d0g_R 2h9g_R 1za3_R 1d4v_A
Probab=54.06 E-value=7.3 Score=29.54 Aligned_cols=26 Identities=19% Similarity=0.468 Sum_probs=17.9
Q ss_pred eecCCcccccccccccCCcccCCcc-ccccc
Q psy17098 111 KCKPGFEADVEKQTCNGTCHACPET-TINFA 140 (204)
Q Consensus 111 ~C~~Gye~~~~~~~C~~~C~~Cp~g-~~k~A 140 (204)
.|.+|+...... ..|..|++| +|...
T Consensus 27 ~CppG~~~~~~~----t~C~pC~~g~ty~~~ 53 (130)
T 1du3_A 27 LCPPGHHISEDG----RDCISCKYGQDYSTH 53 (130)
T ss_dssp BBCTTEEECSSS----SCEEECCTTTEECCS
T ss_pred CCCCCceecCCC----CcCccCCCcCEEeCC
Confidence 688888875433 355889988 67543
No 28
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=53.70 E-value=24 Score=30.01 Aligned_cols=32 Identities=22% Similarity=0.375 Sum_probs=24.5
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++-.......++|..||.|..+.-.|
T Consensus 87 v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C 118 (319)
T 1qub_A 87 ISFSCNTGFYLNGADSAKCTEEGKWSPELPVC 118 (319)
T ss_dssp EEEEECTTEEEESCSEEEECTTSCEESCCCEE
T ss_pred EEEECCCCceeCCCCceEECCCCeECCCCCCC
Confidence 55678877665567799999999998655555
No 29
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=53.05 E-value=4.6 Score=29.58 Aligned_cols=48 Identities=23% Similarity=0.381 Sum_probs=35.5
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCcc-----ccCCCeEEecccCeEEc
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAE-----EVGTPTYLCKGDGKWYL 183 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~-----~~~~P~~~C~~~G~W~v 183 (204)
..||..+-+++=.|.|.+|. .|.-.|..--. ..+....+|..+|+|..
T Consensus 29 ~~C~~~wD~~~CWp~t~~G~------~v~~~CP~~~~~~~~~~~~~a~R~C~~~G~W~~ 81 (96)
T 4ers_A 29 LVCNRTFDKYSCWPDTPANT------TANISCPWYLPWHHKVQHRFVFKRCGPDGQWVR 81 (96)
T ss_dssp SEECCEECSSCEECCEETTE------EEEEECCTTSTTTTTSTTCEEEEEECTTSCBCB
T ss_pred CCCCCccCCcccCCCCCCCC------EEECCCChhhCcCccCCccceeeecCCCCeEeC
Confidence 46999999999999999974 23556875332 22346789999999974
No 30
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=52.67 E-value=3.2 Score=32.47 Aligned_cols=29 Identities=24% Similarity=0.651 Sum_probs=23.0
Q ss_pred eeccceeecCCcccccccccccCCcccCCcccccccc
Q psy17098 105 LPSGGCKCKPGFEADVEKQTCNGTCHACPETTINFAH 141 (204)
Q Consensus 105 ~p~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A~ 141 (204)
...|.|.|++||+. ..| ..|++++|.+..
T Consensus 128 ~~tG~C~C~~g~~G----~~C----d~C~~g~~g~~~ 156 (162)
T 1klo_A 128 PVTGQCQCLPHVSG----RDC----GTCDPGYYNLQS 156 (162)
T ss_dssp TTTCCCCBCTTEES----TTC----CEECTTCBCGGG
T ss_pred CCCCEeECCCCCcC----CCC----CCCCCCcccCCC
Confidence 34699999999983 344 889999999863
No 31
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=49.90 E-value=45 Score=24.12 Aligned_cols=30 Identities=17% Similarity=0.367 Sum_probs=22.2
Q ss_pred EEeEEccCceecCC---CceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGT---PTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~---P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=..... ..+.|+.+| |..+ -.|
T Consensus 33 v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~-p~C 65 (124)
T 2yby_A 33 YSYKCDNGFSPPSGYSWDYLRCTAQG-WEPE-VPC 65 (124)
T ss_dssp EEEEECTTEECTTCSSCEEEEEETTE-EESS-SCC
T ss_pred EEEECCCCCEeCCCCCccEEEecCCC-ccCC-Cce
Confidence 55688887665555 789999999 9864 455
No 32
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=48.69 E-value=25 Score=27.27 Aligned_cols=26 Identities=19% Similarity=0.494 Sum_probs=20.3
Q ss_pred EEeEEccCceecCCCceEEeccceEEe
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYL 105 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~ 105 (204)
|.=+|-++-.......+.|. +|+|..
T Consensus 91 v~~~C~~Gy~l~G~~~~~C~-~G~Ws~ 116 (188)
T 3sw0_X 91 VEYQCQNLYQLEGNKRITCR-NGQWSE 116 (188)
T ss_dssp EEEEECTTCEEESCSEEEEE-TTEECC
T ss_pred EEEEcCCCCEECCCCeEEcC-CCccCC
Confidence 55688877666566789999 999974
No 33
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=46.94 E-value=51 Score=24.83 Aligned_cols=32 Identities=22% Similarity=0.524 Sum_probs=22.9
Q ss_pred EEeEEccCceecC------CCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVG------TPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~------~P~~~C~~~G~W~~p~g~C 110 (204)
+.=+|-++-.... ...+.|+.||+|..+.-.|
T Consensus 30 v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C 67 (159)
T 2qy0_A 30 FIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRC 67 (159)
T ss_dssp EEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCCCEE
T ss_pred EEEEcCCCcEEccCCcccceeEEECCCCCcCcCCCCcc
Confidence 4557887766432 4789999999998655445
No 34
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=45.88 E-value=30 Score=33.37 Aligned_cols=73 Identities=25% Similarity=0.513 Sum_probs=40.7
Q ss_pred EeEEEEEEEEecChhhhhccccCCCCCCCCCccceEeEEeEEccCcee-cCCCceEEe-ccceEEeeccceeecCCccc
Q psy17098 42 ISLLAIKVYYITCPETTINFAHFPTTPTGREVTFIEQATGRCVENAEE-VGTPTYLCK-GDGKWYLPSGGCKCKPGFEA 118 (204)
Q Consensus 42 val~sVrVyy~~CP~~~~~la~Fp~T~ag~~~~slv~v~G~CV~~A~~-~~~P~~~C~-~~G~W~~p~g~C~C~~Gye~ 118 (204)
.....|.|=-+.||.... ..|.-.+.|-.....+.+.-.|--.=.. .-.....|+ ..|... .|.|.|.+||..
T Consensus 394 ~v~F~v~v~~~~Cp~~~~--~~~~i~p~G~~e~l~v~v~~~C~C~C~~~pc~n~~~C~~g~G~~~--~G~C~C~~Gy~G 468 (690)
T 3fcs_B 394 TVSFSIEAKVRGCPQEKE--KSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFE--CGVCRCGPGWLG 468 (690)
T ss_dssp EEEEEEEEEECSCCSSSE--EEEEEEETTCSCCEEEEEEECCSCGGGTTCCTTCTTTTTTSEEEE--TTEEEECTTCCS
T ss_pred eEEEEEEEEeecCCCCCc--eEEEEeecCCccceeeecccccccCCcCCCCCCCCcccCCCCeEe--CCceEeCCCccC
Confidence 344678888889994322 2333333343233445566554411000 112234687 777764 789999999983
No 35
>3etp_A Ephrin type-B receptor 2; EPH receptor, tyrosine kinase, alternative splicing, ATP- binding, glycoprotein, kinase, membrane, nucleotide- binding; 2.00A {Mus musculus} SCOP: b.18.1.4 PDB: 1nuk_A 1kgy_A 1shw_B*
Probab=45.45 E-value=3.7 Score=33.77 Aligned_cols=9 Identities=44% Similarity=0.542 Sum_probs=7.9
Q ss_pred CccCCCCCcC
Q psy17098 1 RIAAGEGRFN 10 (204)
Q Consensus 1 tiAade~~f~ 10 (204)
||||||+ |+
T Consensus 128 TIAAdes-f~ 136 (187)
T 3etp_A 128 TIAADES-IS 136 (187)
T ss_dssp EEECCSC-EE
T ss_pred EEecCCc-cc
Confidence 7999998 75
No 36
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=45.36 E-value=7.7 Score=24.78 Aligned_cols=18 Identities=22% Similarity=0.835 Sum_probs=13.8
Q ss_pred CCeecCCCceeccccCcc
Q psy17098 186 GGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 186 g~C~C~~Gye~~~~~~~C 203 (204)
..|.|.+||+...++.+|
T Consensus 21 ~~C~C~~Gy~L~~Dg~tC 38 (53)
T 2bz6_L 21 RSCRCHEGYSLLADGVSC 38 (53)
T ss_dssp EEEECCTTEEECTTSSCE
T ss_pred EEeeCCCCCEECCCCCcc
Confidence 469999999976566565
No 37
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=45.10 E-value=54 Score=29.68 Aligned_cols=31 Identities=26% Similarity=0.549 Sum_probs=20.9
Q ss_pred ecccccCccccCCCeEEecccCeEEccCCCe
Q psy17098 158 TGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 188 (204)
Q Consensus 158 ~G~CV~na~~~~~P~~~C~~~G~W~vp~g~C 188 (204)
.=+|-..-.-.+...+.|..+|.|..+.-.|
T Consensus 286 ~~~C~~Gy~l~G~~~~~C~~~g~W~~~~p~C 316 (551)
T 1ntl_A 286 TLECEDGYTLEGSSQSQCQSDGSWNPLLAKC 316 (551)
T ss_pred EEEcCCCcEecCCcceEEeCCCeECCCCCee
Confidence 3466555443456789999999998655545
No 38
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=44.90 E-value=7.9 Score=24.50 Aligned_cols=20 Identities=20% Similarity=0.684 Sum_probs=14.6
Q ss_pred cCCCeecCCCceeccccCcc
Q psy17098 184 PSGGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 184 p~g~C~C~~Gye~~~~~~~C 203 (204)
..-.|.|.+||+...++.+|
T Consensus 17 gs~~C~C~~Gy~L~~d~~tC 36 (51)
T 1kig_L 17 SEVRCSCAHGYVLGDDSKSC 36 (51)
T ss_dssp TEECCCCCTTEEECTTSSCE
T ss_pred CCeEEeCCCCcEECCCCCcc
Confidence 45579999999965555555
No 39
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=43.69 E-value=7.2 Score=24.15 Aligned_cols=20 Identities=30% Similarity=0.928 Sum_probs=15.3
Q ss_pred cCCCeecCCCceeccccCcc
Q psy17098 184 PSGGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 184 p~g~C~C~~Gye~~~~~~~C 203 (204)
..-.|.|.+||..+..+.+|
T Consensus 31 Gsy~C~C~~Gy~~~~d~~~C 50 (53)
T 1apq_A 31 GGYFCSCRPGYELQEDRHSC 50 (53)
T ss_dssp TEEEEECSTTCEECTTSSCE
T ss_pred CCeEEECCCCCeECCCCCcc
Confidence 45679999999976666666
No 40
>4dlo_A Brain-specific angiogenesis inhibitor 3; GAIN domain, includes GPS motif, autoproteolytic fold, extra signaling protein; HET: NAG FUL; 2.30A {Homo sapiens}
Probab=43.65 E-value=8.6 Score=34.14 Aligned_cols=53 Identities=30% Similarity=0.514 Sum_probs=41.1
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCccccCCCeEEeccc--C--eEEcc-CCCeec
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAEEVGTPTYLCKGD--G--KWYLP-SGGCKC 190 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~~~~~P~~~C~~~--G--~W~vp-~g~C~C 190 (204)
..||+.+..--.||+|.+|.. +.-.|..++.. ..+.+|..+ | .|..| ...|.-
T Consensus 18 ~~C~~~~~~~i~Wp~T~~G~~------a~~~Cp~g~~G--~a~r~C~~~~~g~~~W~~p~~~~CtS 75 (382)
T 4dlo_A 18 EICPEDYLMSMVWKRTPAGDL------AFNQCPLNATG--TTSRRCSLSLHGVAFWEQPSFARCIS 75 (382)
T ss_dssp CEECCBCTTTSCBCCEETTCE------EEECCCTTEEE--EEEEEEEECTTSCEEECCCEEEEEEE
T ss_pred ccCChhhcCceEECCCCCCCe------EEccCcCCCce--eEEEEeCCCCCCceecCCCCcccCCC
Confidence 689999999999999999863 23589999863 467789864 5 79987 777753
No 41
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=43.30 E-value=9.9 Score=29.04 Aligned_cols=33 Identities=18% Similarity=0.485 Sum_probs=22.5
Q ss_pred ccceeecCCcccccccccccCCcccCCccccccc
Q psy17098 107 SGGCKCKPGFEADVEKQTCNGTCHACPETTINFA 140 (204)
Q Consensus 107 ~g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A 140 (204)
...|.|.+||....+... ...|+.||.|+|...
T Consensus 80 dt~C~C~~G~y~~~g~~~-~~~C~~C~~Gtfs~~ 112 (146)
T 2hey_R 80 DTVCRCRAGTQPLDSYKP-GVDCAPCPPGHFSPG 112 (146)
T ss_dssp CCEEEECTTEEESCSSST-TSSEEECCTTEECCS
T ss_pred CccccCCCCeeeCCCccc-CcccccCCCCcccCC
Confidence 467999999986321111 135699999999864
No 42
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=42.97 E-value=8.6 Score=24.56 Aligned_cols=20 Identities=25% Similarity=0.619 Sum_probs=14.1
Q ss_pred cCCCeecCCCceeccccCcc
Q psy17098 184 PSGGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 184 p~g~C~C~~Gye~~~~~~~C 203 (204)
....|.|.+||+.+..+.+|
T Consensus 20 Gsy~C~C~~Gy~L~~d~~~C 39 (55)
T 2jkh_L 20 NSVVCSCARGYTLADNGKAC 39 (55)
T ss_dssp TEEEEECCTTEEECTTSSCE
T ss_pred CCeEEeCCCCCEECCCCCee
Confidence 34569999999865555555
No 43
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=41.98 E-value=9.3 Score=25.04 Aligned_cols=19 Identities=21% Similarity=0.733 Sum_probs=14.4
Q ss_pred CCCeecCCCceeccccCcc
Q psy17098 185 SGGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 185 ~g~C~C~~Gye~~~~~~~C 203 (204)
...|.|.+||+...++.+|
T Consensus 20 s~~C~C~~Gy~L~~D~~tC 38 (59)
T 2wph_E 20 KVVCSCTEGYRLAENQKSC 38 (59)
T ss_dssp CEEEECCTTEEECTTSSCE
T ss_pred CEEeeCCCCcEECCCCCcc
Confidence 4469999999976666665
No 44
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=41.03 E-value=11 Score=26.77 Aligned_cols=47 Identities=17% Similarity=0.382 Sum_probs=33.7
Q ss_pred cChhhhhcc-ccCCCCCCCCCccceEeEEeEEccCce-----ecCCCceEEeccceEEe
Q psy17098 53 TCPETTINF-AHFPTTPTGREVTFIEQATGRCVENAE-----EVGTPTYLCKGDGKWYL 105 (204)
Q Consensus 53 ~CP~~~~~l-a~Fp~T~ag~~~~slv~v~G~CV~~A~-----~~~~P~~~C~~~G~W~~ 105 (204)
.||.+-.++ +=.|.|.+|.. |.-.|-.--. ....-..+|+.||+|..
T Consensus 19 ~C~~~wD~~~~CWp~t~~G~~------v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~ 71 (84)
T 2l27_A 19 QCNASVDLIGTCWPRSPAGQL------VVRPCPAFFYGVRYNTTNNGYRECLANGSWAA 71 (84)
T ss_dssp BCCCSCSSSSCCCCCCBSSBC------CBCCCCSSBTTBCCCCSSCCBCCEETTTEECS
T ss_pred CCCccccCccccCCCCCCCCE------EEecCchhhcCcccCcCCceecCCCCCCcCCC
Confidence 499999999 99999998743 3346665321 12345788999999964
No 45
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=39.65 E-value=19 Score=34.74 Aligned_cols=20 Identities=30% Similarity=0.953 Sum_probs=15.0
Q ss_pred EEeccceEEeeccceeecCCcc
Q psy17098 96 LCKGDGKWYLPSGGCKCKPGFE 117 (204)
Q Consensus 96 ~C~~~G~W~~p~g~C~C~~Gye 117 (204)
.|...|.-.- +.|.|.+||.
T Consensus 535 ~C~~~G~C~~--g~C~C~~Gy~ 554 (690)
T 3fcs_B 535 MCSGHGQCSC--GDCLCDSDWT 554 (690)
T ss_dssp BGGGSEEEET--TEEEECTTEE
T ss_pred CCCCCCEecC--CeeECcCCCc
Confidence 3666676644 8899999998
No 46
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=39.59 E-value=64 Score=31.81 Aligned_cols=32 Identities=28% Similarity=0.577 Sum_probs=24.0
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++-.....+.+.|..+|.|..+.-.|
T Consensus 647 v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C 678 (913)
T 3t5o_A 647 VEISCLTGFETVGYQYFRCLPDGTWRQGDVEC 678 (913)
T ss_dssp EEEEECTTEEEESCCEEEECTTSCEECCSCEE
T ss_pred EEEEeCCCCEECCCCceEECCCCeEcCCCCee
Confidence 45577766665677899999999998665545
No 47
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=39.44 E-value=32 Score=22.34 Aligned_cols=31 Identities=29% Similarity=0.694 Sum_probs=23.4
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=.......+.|+ +|+|.-+.-.|
T Consensus 35 v~f~C~~Gy~L~G~~~~~C~-~g~Ws~~~P~C 65 (68)
T 1srz_A 35 VEFRCDPDFHLVGSSRSVCS-QGQWSTPKPHC 65 (68)
T ss_dssp EEEEECTTEEECSCCEEEEE-TTEESSCCCCE
T ss_pred EEEECCCCCEEeCCCcCEEC-CCEEeCCCCEe
Confidence 55688877666677899999 99998655444
No 48
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=39.11 E-value=13 Score=32.12 Aligned_cols=20 Identities=25% Similarity=0.770 Sum_probs=12.6
Q ss_pred cCCCeecCCCceeccccCcc
Q psy17098 184 PSGGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 184 p~g~C~C~~Gye~~~~~~~C 203 (204)
..-.|.|.+||+....+..|
T Consensus 62 g~~~C~C~~g~~l~~d~~~C 81 (386)
T 3v65_B 62 GAFQCWCEAGYELRPDRRSC 81 (386)
T ss_dssp --CCEECCTTEEECTTSSCE
T ss_pred CCCeEEECCCceEcCCCCeE
Confidence 35678888888865445555
No 49
>4dlq_A Latrophilin-1; GAIN domain, includes the GPS motif, hormone binding domain, autoproteolysis, A-latrotoxin, extracellular domain; HET: NAG; 1.85A {Rattus norvegicus}
Probab=36.96 E-value=12 Score=33.08 Aligned_cols=52 Identities=19% Similarity=0.474 Sum_probs=40.0
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCccccCCCeEEecc-cCeEE---ccCCCee
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAEEVGTPTYLCKG-DGKWY---LPSGGCK 189 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~~~~~P~~~C~~-~G~W~---vp~g~C~ 189 (204)
..||..+.+-..+|.|.+|.. +.-.|..++. +..+.+|.. +|.|. .-...|.
T Consensus 22 ~~C~~~~~~~~~Wp~t~~G~~------a~~~CP~~~~--g~a~r~C~~~~g~W~~~~p~~~~C~ 77 (381)
T 4dlq_A 22 LFCEPREVRRVQWPATQQGML------VERPCPKGTR--GIASFQCLPALGLWNPRGPDLSNCT 77 (381)
T ss_dssp CEECCEEETTEEECCEETTCE------EEEECCTTCB--SEEEEEBCTTTCSBCTTCCBCTTCB
T ss_pred CCCChhhcCceEECCCCCCCE------EeCcCccCCC--ceEEEEecCCCCEeecCCCchhhcC
Confidence 578999999999999999854 3458988774 446788985 69998 4466676
No 50
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=36.85 E-value=69 Score=26.70 Aligned_cols=32 Identities=31% Similarity=0.642 Sum_probs=22.7
Q ss_pred EEeEEccC------ceecCCCceEEecc----ceEEeeccce
Q psy17098 79 ATGRCVEN------AEEVGTPTYLCKGD----GKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~------A~~~~~P~~~C~~~----G~W~~p~g~C 110 (204)
|.=+|-++ -........+|..+ |+|.-+.-.|
T Consensus 186 v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C 227 (290)
T 2xrb_A 186 VTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQC 227 (290)
T ss_dssp EEEEECBCTTSCBCEEEESCSEEEEEESSSSSEEESSCCCEE
T ss_pred EEEEeCCCCCCcceEEecCCceeEecCCCCCCCeECCCCCcc
Confidence 45588887 22346678999998 9998655555
No 51
>4dlo_A Brain-specific angiogenesis inhibitor 3; GAIN domain, includes GPS motif, autoproteolytic fold, extra signaling protein; HET: NAG FUL; 2.30A {Homo sapiens}
Probab=36.79 E-value=8.5 Score=34.18 Aligned_cols=56 Identities=30% Similarity=0.498 Sum_probs=41.4
Q ss_pred EEEecChhhhhccccCCCCCCCCCccceEeEEeEEccCceecCCCceEEecc--c--eEEee-ccceee
Q psy17098 49 VYYITCPETTINFAHFPTTPTGREVTFIEQATGRCVENAEEVGTPTYLCKGD--G--KWYLP-SGGCKC 112 (204)
Q Consensus 49 Vyy~~CP~~~~~la~Fp~T~ag~~~~slv~v~G~CV~~A~~~~~P~~~C~~~--G--~W~~p-~g~C~C 112 (204)
+-|..||+....-..||+|.+|.. +.-.|-.++.. .-+..|..+ | .|..| ...|.-
T Consensus 15 ~~~~~C~~~~~~~i~Wp~T~~G~~------a~~~Cp~g~~G--~a~r~C~~~~~g~~~W~~p~~~~CtS 75 (382)
T 4dlo_A 15 APYEICPEDYLMSMVWKRTPAGDL------AFNQCPLNATG--TTSRRCSLSLHGVAFWEQPSFARCIS 75 (382)
T ss_dssp CCCCEECCBCTTTSCBCCEETTCE------EEECCCTTEEE--EEEEEEEECTTSCEEECCCEEEEEEE
T ss_pred chhccCChhhcCceEECCCCCCCe------EEccCcCCCce--eEEEEeCCCCCCceecCCCCcccCCC
Confidence 347789999999999999999863 33488888763 356778864 5 68876 577753
No 52
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=36.53 E-value=98 Score=22.00 Aligned_cols=32 Identities=22% Similarity=0.495 Sum_probs=23.5
Q ss_pred EEeEEccCceecCCCceEEeccc---eEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDG---KWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G---~W~~p~g~C 110 (204)
+.=+|-++=.......+.|..+| .|.-+.-.|
T Consensus 26 ~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C 60 (125)
T 1h03_P 26 ISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC 60 (125)
T ss_dssp EEEEECTTEEEESCSEEEEEEETTEEEESSCCCEE
T ss_pred EEEECCCCCeECCCCeeEEcCCCCCCEeCCCCCcC
Confidence 44578777665567799999999 897655444
No 53
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.81 E-value=23 Score=23.39 Aligned_cols=32 Identities=28% Similarity=0.433 Sum_probs=23.2
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=.......+.|+.||+|.-+.-.|
T Consensus 32 v~y~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C 63 (74)
T 2yra_A 32 ITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFC 63 (74)
T ss_dssp EEEEECTTEEEESCSEEEBCTTSCBSSCCCEE
T ss_pred EEEECCCCCEECCCCceEECCCCEECCCCCEE
Confidence 45588877665567789999999997544334
No 54
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=35.14 E-value=14 Score=25.07 Aligned_cols=18 Identities=22% Similarity=0.835 Sum_probs=13.9
Q ss_pred CCeecCCCceeccccCcc
Q psy17098 186 GGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 186 g~C~C~~Gye~~~~~~~C 203 (204)
..|.|.+||+....+.+|
T Consensus 27 ~~C~C~~Gy~L~~D~~tC 44 (69)
T 1kli_L 27 RSCRCHEGYSLLADGVSC 44 (69)
T ss_dssp EEEECCTTEEECTTSSCE
T ss_pred EEEeCCCCCeECCCCCcc
Confidence 469999999976666565
No 55
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=35.03 E-value=18 Score=27.27 Aligned_cols=48 Identities=21% Similarity=0.364 Sum_probs=36.0
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCccc-----cCCCeEEecccCeEEc
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAEE-----VGTPTYLCKGDGKWYL 183 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~~-----~~~P~~~C~~~G~W~v 183 (204)
..|+..+-+++=.|.|.+|. .|.-.|..--.. .+....+|..+|+|..
T Consensus 37 ~~C~~twD~~~CWp~t~~G~------~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~ 89 (122)
T 3c5t_A 37 LFCNRTFDEYACWPDGEPGS------FVNVSCPWYLPWASSVPQGHVYRFCTAEGLWLQ 89 (122)
T ss_dssp CCBCCEECSSCEECCBCTTE------EEEEECCTTSTTGGGCTTCEEEEEECTTSSBCC
T ss_pred CCCCcccCcccccCCCCCCc------EEEeeCcchhhCccccccceEecCCCCCCcccc
Confidence 35999999999999999973 345678865431 2335689999999963
No 56
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A
Probab=34.93 E-value=30 Score=26.23 Aligned_cols=47 Identities=19% Similarity=0.375 Sum_probs=35.7
Q ss_pred cCCcccccc-ccCCCCCCCCceeeEEeeecccccCccc-----cCCCeEEecccCeEEc
Q psy17098 131 ACPETTINF-AHFPTTPTGREVTFIEQATGRCVENAEE-----VGTPTYLCKGDGKWYL 183 (204)
Q Consensus 131 ~Cp~g~~k~-A~Fp~T~~g~~~~slv~v~G~CV~na~~-----~~~P~~~C~~~G~W~v 183 (204)
.|+..+-++ +=.|.|.+|. .|.-.|..--.. ......+|..+|+|.-
T Consensus 45 ~C~~twD~i~~CWp~t~~G~------~v~~pCP~~~~~~~~~~~g~vsR~C~~nG~W~~ 97 (119)
T 1u34_A 45 YCNTTLDQIGTCWPQSAPGA------LVERPCPEYFNGIKYNTTRNAYRECLENGTWAS 97 (119)
T ss_dssp CCCCBCCSSSCCBCCCCTTC------BCCCCSSCTTSSSCCCCCCCCCCBCCTTSCCCS
T ss_pred CCCccccChhhcCCCCCCCC------EEEecCccccCCcccCCCCeeecCCCCCCcCCC
Confidence 399999999 9999999984 246678765431 2345688999999963
No 57
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=34.61 E-value=17 Score=33.25 Aligned_cols=30 Identities=17% Similarity=0.419 Sum_probs=21.4
Q ss_pred cceeecCCcccccccccccCCcccCCccccccccCCCC
Q psy17098 108 GGCKCKPGFEADVEKQTCNGTCHACPETTINFAHFPTT 145 (204)
Q Consensus 108 g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A~Fp~T 145 (204)
+.|.|..|+.. . .|+.|.++++....-+.|
T Consensus 313 ~~C~C~~~ttG----~----~CE~C~pgy~~~P~~~gt 342 (426)
T 3zyj_B 313 LTCECEHNTTG----P----DCGKCKKNYQGRPWSPGS 342 (426)
T ss_dssp EEECCCTTEES----S----SSCEECTTCCSSCCCCCB
T ss_pred ceeeCCCCCcC----C----CccccccccccCcccCCc
Confidence 58999999983 2 359999998765443433
No 58
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=34.32 E-value=95 Score=25.98 Aligned_cols=32 Identities=31% Similarity=0.642 Sum_probs=21.9
Q ss_pred EEeEEccC------ceecCCCceEEecc----ceEEeeccce
Q psy17098 79 ATGRCVEN------AEEVGTPTYLCKGD----GKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~------A~~~~~P~~~C~~~----G~W~~p~g~C 110 (204)
|.=+|-++ -.......++|+.+ |.|.-+.-.|
T Consensus 153 v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C 194 (320)
T 1ntj_A 153 VTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQC 194 (320)
T ss_pred EEEECCCCCCCcceEEEeCCCceEEecCCCCCCEECCCCccc
Confidence 45578877 23345678999998 9998654444
No 59
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=34.23 E-value=88 Score=26.18 Aligned_cols=32 Identities=19% Similarity=0.448 Sum_probs=21.0
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=.......+.|+.+|+|..+.-.|
T Consensus 224 v~f~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C 255 (320)
T 1ntj_A 224 VEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSC 255 (320)
T ss_pred EEEECCCCCeECCCCCcEECCCCeECCCCCee
Confidence 44466665444456788999999997544344
No 60
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=33.93 E-value=75 Score=26.23 Aligned_cols=31 Identities=32% Similarity=0.579 Sum_probs=20.4
Q ss_pred EEeEEccCceecCCCce-EEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTY-LCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~-~C~~~G~W~~p~g~C 110 (204)
+.=+|-.+-........ .|..+| |..+.-.|
T Consensus 97 v~y~C~~Gy~l~G~~~~r~C~~~g-Ws~~~P~C 128 (277)
T 2wii_C 97 AVYTCNEGYQLLGEINYRECDTDG-WTNDIPIC 128 (277)
T ss_dssp EEEEECTTEEEESSCCEEEBCSSS-BCSCCCEE
T ss_pred EEEEcCCCceEeCCCceeEeCCCC-cCCCCCcc
Confidence 44567666554455555 999999 98655555
No 61
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=33.21 E-value=41 Score=24.19 Aligned_cols=32 Identities=22% Similarity=0.414 Sum_probs=21.8
Q ss_pred EEeEEccCceecCCCceEEeccceEEee-ccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLP-SGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p-~g~C 110 (204)
|.=+|-++=.......+.|+.+|+|..+ .-.|
T Consensus 95 v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~~P~C 127 (130)
T 1ly2_A 95 VTFACKTNFSMNGNKSVWCQANNMWGPTRLPTC 127 (130)
T ss_dssp EEEEECTTEEEESCSEEEECTTSSEESSCCCEE
T ss_pred EEEEeCCCCEEeCCCceEECCCCEECCCCCccc
Confidence 4456776655446678999999999754 4444
No 62
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=31.92 E-value=56 Score=34.90 Aligned_cols=88 Identities=23% Similarity=0.425 Sum_probs=50.9
Q ss_pred EEeEEccCceecCCCceEEeccceEEeecccee---ecCCcccccccccccCCcccCCccccccccCCC---CCCCCcee
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCK---CKPGFEADVEKQTCNGTCHACPETTINFAHFPT---TPTGREVT 152 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C~---C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A~Fp~---T~~g~~~~ 152 (204)
|.=.|.++=.......+.|+.||+|.-+...|. |. +....+ +.. ..+|. -..|.
T Consensus 1832 v~~~C~~gy~l~G~~~~~C~~~g~Ws~~~p~C~~~~C~--~p~~~n-------------g~~--~~~~~~~~y~~g~--- 1891 (1931)
T 2q7z_A 1832 ISYICDPGYLLVGKGFIFCTDQGIWSQLDHYCKEVNCS--FPLFMN-------------GIS--KELEMKKVYHYGD--- 1891 (1931)
T ss_pred EEEEeCCCCeEecCCeeEECCCCeECCCCCeeecCccC--CCCccC-------------Cce--ecCCCCCcccCCC---
Confidence 344777665555778999999999997776665 31 110000 000 00010 01111
Q ss_pred eEEeeecccccCccccCCCeEEecccCeEEccCCCee
Q psy17098 153 FIEQATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCK 189 (204)
Q Consensus 153 slv~v~G~CV~na~~~~~P~~~C~~~G~W~vp~g~C~ 189 (204)
.|.=+|-..-.-...++..|..+|.|.-+...|.
T Consensus 1892 ---~v~~~C~~Gy~l~G~~~~~C~~~g~W~~~~p~C~ 1925 (1931)
T 2q7z_A 1892 ---YVTLKCEDGYTLEGSPWSQCQADDRWDPPLAKCT 1925 (1931)
T ss_pred ---EEEEECCCCCcCCCCCCcEECCCCcCCCCCCccc
Confidence 2344665444434566899999999999888776
No 63
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=31.80 E-value=16 Score=28.20 Aligned_cols=30 Identities=27% Similarity=0.646 Sum_probs=15.0
Q ss_pred cceeecCCcccccccccccCCcccCCccccc
Q psy17098 108 GGCKCKPGFEADVEKQTCNGTCHACPETTIN 138 (204)
Q Consensus 108 g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k 138 (204)
..|.|.+||-.+.....| ..|..||+|++-
T Consensus 77 ~~C~C~~G~y~~~~~~~C-~~C~~C~~G~~v 106 (161)
T 1sg1_X 77 AVCRCAYGYYQDEETGHC-EACSVCEVGSGL 106 (161)
T ss_dssp CEEEECTTEEECTTTCCE-EECCCBCTTEEE
T ss_pred ceeccCCCeEeCCCCccc-cCCccCCCCCee
Confidence 456666666543222333 234566666543
No 64
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=31.47 E-value=93 Score=25.66 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=22.6
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=.......+.|+.+|.|.-+.-.|
T Consensus 161 v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C 192 (277)
T 2wii_C 161 VRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKC 192 (277)
T ss_dssp EECEECTTEEEESCSEEEBCTTSSBSSCCCEE
T ss_pred EEEEcCCCccCcCCCCCEECCCCeECCCCCee
Confidence 45577766554566789999999997554444
No 65
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=31.46 E-value=64 Score=26.07 Aligned_cols=85 Identities=18% Similarity=0.372 Sum_probs=0.0
Q ss_pred EEccCceecCCCceEEeccceEEeeccce---eecCCcccccccccccCCcccCCccccccccCCCCCCCCceeeEEeee
Q psy17098 82 RCVENAEEVGTPTYLCKGDGKWYLPSGGC---KCKPGFEADVEKQTCNGTCHACPETTINFAHFPTTPTGREVTFIEQAT 158 (204)
Q Consensus 82 ~CV~~A~~~~~P~~~C~~~G~W~~p~g~C---~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~ 158 (204)
+|-++-.......+.|+. |+|. +.-.| .|.+= ........+ +..+...+.+++.
T Consensus 156 ~C~~Gy~l~G~~~~~C~~-g~Ws-~~P~C~~~~C~~p-~~~ng~~~~---------~~~~~~~~g~~v~----------- 212 (244)
T 1rid_A 156 SCNSGYSLIGNSGVLCSG-GEWS-DPPTCQIVKCPHP-TISNGYLSS---------GFKRSYSYNDNVD----------- 212 (244)
T ss_dssp ECCSSCEEECSSSBCCSS-SCCC-SCCEEESCCCCCC-CCSSCBCCS---------SCCSSCCSCCCCC-----------
T ss_pred EeCCCCeeCCCCceEECC-CccC-CCCeeeeeeCcCC-CCcCCeecc---------CCCCcccCCCEEE-----------
Q ss_pred cccccCccccCCCeEEecccCeEEccCCCee
Q psy17098 159 GRCVENAEEVGTPTYLCKGDGKWYLPSGGCK 189 (204)
Q Consensus 159 G~CV~na~~~~~P~~~C~~~G~W~vp~g~C~ 189 (204)
=+|...-.-.+...+.|..+|.|.-+.-.|.
T Consensus 213 ~~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~ 243 (244)
T 1rid_A 213 FKCKYGYKLSGSSSSTCSPGNTWKPELPKCV 243 (244)
T ss_dssp CBCSSSCEEESCSCCEEETTTEEESCCCEEE
T ss_pred EEcCCCCEECCCCCeEECCCCeECCCCCEee
No 66
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=31.23 E-value=37 Score=27.87 Aligned_cols=39 Identities=26% Similarity=0.569 Sum_probs=22.6
Q ss_pred EeeecccccCccccCCCeEEecccCeEEccCCCeecCCCce
Q psy17098 155 EQATGRCVENAEEVGTPTYLCKGDGKWYLPSGGCKCKPGFE 195 (204)
Q Consensus 155 v~v~G~CV~na~~~~~P~~~C~~~G~W~vp~g~C~C~~Gye 195 (204)
+.+.-.|--+-.......-.|+..|.-. .|.|.|.+||.
T Consensus 78 i~~~~~C~C~C~~~~~~~~~Csg~G~C~--~g~C~C~~G~~ 116 (217)
T 2p28_B 78 VQVLPQCECRCRDQSRDRSLCHGKGFLE--CGICRCDTGYI 116 (217)
T ss_dssp EEEEECCCCCCCCCCC--CTTTTSEEEE--TTEEEECTTEE
T ss_pred EEecccccCCCCCCCCCCCccCCCceEE--CCEEECCCCcc
Confidence 4444444432222223344688878665 38999999997
No 67
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=30.43 E-value=25 Score=32.04 Aligned_cols=25 Identities=32% Similarity=0.857 Sum_probs=15.9
Q ss_pred cceeecCCcccccccccccCCcccCCccccccc
Q psy17098 108 GGCKCKPGFEADVEKQTCNGTCHACPETTINFA 140 (204)
Q Consensus 108 g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A 140 (204)
+.|.|.+||.. . .|..|+.|++...
T Consensus 407 ~~C~C~~g~~G----~----~C~~C~~Gy~G~~ 431 (525)
T 4aqs_A 407 GQCRCKLHVEG----E----RCDVCKEGFYDLS 431 (525)
T ss_dssp SCCCBCTTEET----T----TTCEECTTEECCC
T ss_pred CccCCCCCCCC----C----cccCCCCCCcCCC
Confidence 55666666652 2 3478899988654
No 68
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.28 E-value=26 Score=23.04 Aligned_cols=32 Identities=25% Similarity=0.469 Sum_probs=21.6
Q ss_pred EEeEEccCceecCCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=.........|+.||+|.-+.-.|
T Consensus 36 v~f~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C 67 (73)
T 2ehf_A 36 LTFECPAAFELVGERVITCQQNNQWSGNKPSC 67 (73)
T ss_dssp EEEECCSSCCBCSCSEEEBCSSSSBSSCCCCB
T ss_pred EEEEcCCCCEEeCCCeEEECCCCeECCCCCeE
Confidence 44577666554566789999999997544333
No 69
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=30.26 E-value=25 Score=27.19 Aligned_cols=47 Identities=19% Similarity=0.327 Sum_probs=36.4
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCcc-----ccCCCeEEecccCeEE
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAE-----EVGTPTYLCKGDGKWY 182 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~-----~~~~P~~~C~~~G~W~ 182 (204)
..|+..+-+++=.|.|.+|. .|.-.|..--. ..+....+|..||+|.
T Consensus 56 ~~C~~twD~~~CWp~t~~G~------~v~~~CP~~~~~~~~~~~g~vsR~C~~dG~W~ 107 (135)
T 2qkh_A 56 LACNGSFDMYVCWDYAAPNA------TARASCPWYLPWHHHVAAGFVLRQCGSDGQWG 107 (135)
T ss_dssp CCBCCEECSSCEECCBCTTE------EEEEECCTTSTTHHHHTTCEEEEEECTTSCBC
T ss_pred CCCCcccCccccCCCCCCCC------EEEecCchhhcCcccCCCceEeccCCCCCCCC
Confidence 46999999999999999973 34667887543 1234568899999997
No 70
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=29.96 E-value=27 Score=28.57 Aligned_cols=26 Identities=27% Similarity=0.637 Sum_probs=19.3
Q ss_pred EecccCeEEccCCCeecCCCceeccccCccC
Q psy17098 174 LCKGDGKWYLPSGGCKCKPGFEADVEKQTCN 204 (204)
Q Consensus 174 ~C~~~G~W~vp~g~C~C~~Gye~~~~~~~C~ 204 (204)
.|..-|.+.-| +.|.|.+||. +..|+
T Consensus 154 ~C~ngG~Cv~P-~~C~C~~Gw~----G~~C~ 179 (188)
T 2ygo_A 154 GCRNGGFCNER-RICECPDGFH----GPHCE 179 (188)
T ss_dssp CCCTTCEECTT-SCEECCTTCB----TTTTC
T ss_pred CCCCCCEeCCC-CcccCcCCCC----CCCCc
Confidence 57777766665 6899999998 45553
No 71
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=29.67 E-value=62 Score=21.94 Aligned_cols=27 Identities=26% Similarity=0.445 Sum_probs=19.5
Q ss_pred EEeEEccCce-ecCC-CceEEeccceEEe
Q psy17098 79 ATGRCVENAE-EVGT-PTYLCKGDGKWYL 105 (204)
Q Consensus 79 v~G~CV~~A~-~~~~-P~~~C~~~G~W~~ 105 (204)
|.=+|-+.-. .... ..+.|++||+|..
T Consensus 34 v~y~C~~g~y~l~g~~~~~~C~~~G~Ws~ 62 (86)
T 3tvj_A 34 IQYSCEETFYTMKVNDGKYVCDADGFWTS 62 (86)
T ss_dssp EEEEECTTTEEECSSCCEEEECTTSSEEE
T ss_pred EEEEcCCCceeccCCCCEEEECCCCCCCc
Confidence 5678977433 3344 6899999999983
No 72
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=29.12 E-value=86 Score=25.30 Aligned_cols=32 Identities=13% Similarity=0.428 Sum_probs=23.5
Q ss_pred EEeEEccCceecC--CCceEEeccceEEe-eccce
Q psy17098 79 ATGRCVENAEEVG--TPTYLCKGDGKWYL-PSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~~--~P~~~C~~~G~W~~-p~g~C 110 (204)
+.=+|-++-.... ...+.|..+|.|.. +.-.|
T Consensus 26 ~~y~C~~Gy~~~g~~~~~~~C~~~g~Ws~~~~p~C 60 (252)
T 3o8e_B 26 VDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDAC 60 (252)
T ss_dssp EEEEECTTEEECSSSCCEEEBCTTSSBCCCCSTTE
T ss_pred EEEEcCCCccCCCCCCCeEEECCCCcCCCCCCCce
Confidence 5568888877653 36899999999976 45555
No 73
>2xdg_A Growth hormone-releasing hormone receptor; signaling protein, membrane protein; 1.95A {Homo sapiens}
Probab=29.11 E-value=33 Score=24.54 Aligned_cols=46 Identities=26% Similarity=0.442 Sum_probs=34.7
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCccc----cCCCeEEecccCeEE
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAEE----VGTPTYLCKGDGKWY 182 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~~----~~~P~~~C~~~G~W~ 182 (204)
..|+..+-+++=.|.|.+|. .|.-.|..--.. .+....+|..+| |.
T Consensus 22 ~~C~~~wD~~~CWp~t~~G~------~v~~~CP~~~~~~~~~~~~v~R~C~~~G-W~ 71 (92)
T 2xdg_A 22 LGCPATWDGLLCWPTAGSGE------WVTLPCPDFFSHFSSESGAVKRDCTITG-WS 71 (92)
T ss_dssp SSBCCEECSSCEECCBCTTE------EEEECCCGGGGGTCSSCCCEEEEEETTE-EC
T ss_pred CCCCcccCcccccCCCCCCC------EEEecCcchhccccccCCeEecCCCccc-CC
Confidence 57999999999999999973 345678766531 234568999999 85
No 74
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=28.61 E-value=50 Score=28.58 Aligned_cols=19 Identities=32% Similarity=0.905 Sum_probs=13.6
Q ss_pred CCCeecCCCceeccccCcc
Q psy17098 185 SGGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 185 ~g~C~C~~Gye~~~~~~~C 203 (204)
.-.|.|.+||+.+..+.+|
T Consensus 59 ~~~C~C~~g~~~~~~~~~C 77 (400)
T 3p5b_L 59 GYKCQCEEGFQLDPHTKAC 77 (400)
T ss_dssp SCBCCCCTTCCCCTTTSSC
T ss_pred ceeeeccccccccccccce
Confidence 4578899999866555566
No 75
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=28.42 E-value=1.3e+02 Score=27.13 Aligned_cols=32 Identities=38% Similarity=0.813 Sum_probs=22.1
Q ss_pred EEeEEccCc------eecCCCceEEecc----ceEEeeccce
Q psy17098 79 ATGRCVENA------EEVGTPTYLCKGD----GKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A------~~~~~P~~~C~~~----G~W~~p~g~C 110 (204)
|.=+|-++. .......+.|..+ |.|.-+.-.|
T Consensus 151 v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C 192 (551)
T 1ntl_A 151 VTYRCNTDARGKALFNLVGEPSLYCTSNDGEIGVWSGPPPQC 192 (551)
T ss_pred EEEEeCCCCCccceeEecCCcceEeeCCCCcCCEECCCCCcc
Confidence 456888772 2335678999998 9998655444
No 76
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=28.29 E-value=2e+02 Score=21.90 Aligned_cols=26 Identities=23% Similarity=0.538 Sum_probs=20.5
Q ss_pred EEeEEccCceecCCCceEEeccceEEe
Q psy17098 79 ATGRCVENAEEVGTPTYLCKGDGKWYL 105 (204)
Q Consensus 79 v~G~CV~~A~~~~~P~~~C~~~G~W~~ 105 (204)
+.=+|-.+=.......+.|. +|.|.-
T Consensus 30 ~~y~C~~Gy~l~G~~~~~C~-~g~Ws~ 55 (188)
T 3sw0_X 30 VRYQCRSPYEMFGDEEVMCL-NGNWTE 55 (188)
T ss_dssp EEEEECTTCEEESCSEEEEE-TTEECC
T ss_pred EEEECCCCCEECCCCEEEeC-CCEeCC
Confidence 56688877666667799999 999973
No 77
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=27.34 E-value=37 Score=19.49 Aligned_cols=11 Identities=55% Similarity=0.900 Sum_probs=9.1
Q ss_pred CCCeecCCCce
Q psy17098 185 SGGCKCKPGFE 195 (204)
Q Consensus 185 ~g~C~C~~Gye 195 (204)
.-.|.|.+||.
T Consensus 23 ~~~C~C~~G~~ 33 (39)
T 1edm_B 23 SYECWCPFGFE 33 (39)
T ss_dssp EEEEECCTTCC
T ss_pred ceEeECCCCCc
Confidence 34799999997
No 78
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=26.83 E-value=92 Score=25.18 Aligned_cols=32 Identities=19% Similarity=0.326 Sum_probs=23.1
Q ss_pred EEeEEccCceec--CCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEV--GTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~--~~P~~~C~~~G~W~~p~g~C 110 (204)
+.=+|-++-... ....+.|..||.|..+.-.|
T Consensus 93 ~~y~C~~Gy~l~g~~~~~~~C~~~g~Ws~~~p~C 126 (254)
T 1ok3_A 93 VEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFC 126 (254)
T ss_dssp EEEEECTTEEECTTSCCEEEBCTTSCBCCCCCSE
T ss_pred EEEEeCCCceeCCCCCCeEEECCCCeECCCCCee
Confidence 556888776643 25689999999998665555
No 79
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=25.22 E-value=34 Score=25.99 Aligned_cols=43 Identities=26% Similarity=0.654 Sum_probs=26.0
Q ss_pred EEeccceEEeeccce--eecCCcccccc-cccccCCcccCCccccccc
Q psy17098 96 LCKGDGKWYLPSGGC--KCKPGFEADVE-KQTCNGTCHACPETTINFA 140 (204)
Q Consensus 96 ~C~~~G~W~~p~g~C--~C~~Gye~~~~-~~~C~~~C~~Cp~g~~k~A 140 (204)
.|.. |++.. .+.| .|.+|+..... ...-+..|+.||+++|...
T Consensus 5 ~C~~-~eY~~-~~~CC~~CppG~~~~~~C~~~~~t~C~pC~~gtys~~ 50 (134)
T 4fhq_A 5 SCKE-DEYPV-GSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAH 50 (134)
T ss_dssp CCCT-TEEEE-TTEEEECBCTTEEEEECCC--CCCEEEECCTTEECCS
T ss_pred CCCc-ccEEC-cCcCCCCCCCCCEecccCCCCCCCcccCCCCCCEecC
Confidence 3544 45544 4666 89999996321 0000235799999988765
No 80
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=25.20 E-value=92 Score=27.37 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=23.7
Q ss_pred EEeEEccCceecC--CCceEEeccceEEeecccee
Q psy17098 79 ATGRCVENAEEVG--TPTYLCKGDGKWYLPSGGCK 111 (204)
Q Consensus 79 v~G~CV~~A~~~~--~P~~~C~~~G~W~~p~g~C~ 111 (204)
+.=+|-.+-.... ...+.|..||.|..+.-.|.
T Consensus 125 v~y~C~~GY~l~g~~~~~~tC~~~g~Ws~~~p~C~ 159 (381)
T 3iyp_F 125 VEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCK 159 (381)
T ss_dssp EEEEECTTEEECTTSCCEEEBCTTSCBCCCCCSEE
T ss_pred EEEEcCCCcccCCCCCceEEecCCCcCcccCceec
Confidence 5567877666432 56899999999987666664
No 81
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=25.12 E-value=16 Score=28.07 Aligned_cols=9 Identities=22% Similarity=0.504 Sum_probs=2.0
Q ss_pred ccCCccccc
Q psy17098 130 HACPETTIN 138 (204)
Q Consensus 130 ~~Cp~g~~k 138 (204)
+.||+|+|.
T Consensus 125 ~~C~~GtfS 133 (142)
T 2uwi_A 125 KKCRKGTYS 133 (142)
T ss_dssp EECC-----
T ss_pred cCCCCCccc
Confidence 455554443
No 82
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=24.61 E-value=41 Score=30.43 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=23.5
Q ss_pred cceeecCCcccccccccccCCcccCCccccccccCCCCC
Q psy17098 108 GGCKCKPGFEADVEKQTCNGTCHACPETTINFAHFPTTP 146 (204)
Q Consensus 108 g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A~Fp~T~ 146 (204)
|.|.|..++.. .. |+.|.+++|....-|.|.
T Consensus 286 g~C~C~hnT~G----~~----CErC~pGy~g~p~~~at~ 316 (403)
T 2y38_A 286 LQCACQHNTCG----GS----CDRCCPGFNQQPWKPATT 316 (403)
T ss_dssp EEECCCTTEES----SS----CCEECTTCCSSCCCCCCS
T ss_pred eEeECcCcCcC----CC----CCCCCccccCCccccccc
Confidence 56899888873 23 599999999987666653
No 83
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=23.86 E-value=23 Score=26.46 Aligned_cols=20 Identities=20% Similarity=0.554 Sum_probs=15.2
Q ss_pred CCCeecCCCceeccccCccC
Q psy17098 185 SGGCKCKPGFEADVEKQTCN 204 (204)
Q Consensus 185 ~g~C~C~~Gye~~~~~~~C~ 204 (204)
.-.|.|.+||+...++.+|+
T Consensus 138 ~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 138 GYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp EEEEECCTTCEECTTSSCEE
T ss_pred CEEEecCCCcEECCCCCccc
Confidence 45789999999766666673
No 84
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=23.69 E-value=46 Score=29.69 Aligned_cols=65 Identities=20% Similarity=0.465 Sum_probs=0.0
Q ss_pred cceeecCCcccccccccccCCcccCCccccccccCCCCCCCCceeeEEeeecccccCccccCCCeEEecccCeEEc----
Q psy17098 108 GGCKCKPGFEADVEKQTCNGTCHACPETTINFAHFPTTPTGREVTFIEQATGRCVENAEEVGTPTYLCKGDGKWYL---- 183 (204)
Q Consensus 108 g~C~C~~Gye~~~~~~~C~~~C~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~~~~~P~~~C~~~G~W~v---- 183 (204)
+.|.|+.||. +..| ..|-++++...--+.|...+ +.|.+ |+=++.+..
T Consensus 272 ~~C~C~~nt~----G~~C----e~C~~gy~~~p~~~g~~~~~---------~~C~~-----------C~Cn~~g~~C~~d 323 (375)
T 4aqt_A 272 LMCNCKHNTY----GVDC----EKCLPFFNDRPWRRATAESA---------SECLP-----------CDCNGRSQECYFD 323 (375)
T ss_dssp EEECCCTTEE----STTS----CEECTTCCSSCCCCCCSSCC---------CCCCC-----------CCGGGSCSCEEEC
T ss_pred eeeeCcCCCc----CCCc----ccCCCCCcCCCCCCCccCCC---------CCCCC-----------CcCcCCCCCcccc
Q ss_pred --------cCCCee-cCCCceeccccCccC
Q psy17098 184 --------PSGGCK-CKPGFEADVEKQTCN 204 (204)
Q Consensus 184 --------p~g~C~-C~~Gye~~~~~~~C~ 204 (204)
..|.|. |++||+ +..|.
T Consensus 324 ~~~~~c~~~~G~C~~C~~n~~----G~~Ce 349 (375)
T 4aqt_A 324 PELYRSTGHGGHCTNCRDNTD----GAKCE 349 (375)
T ss_dssp HHHHHHSSCCEEECSCTTTEE----STTSC
T ss_pred cccCccCCCCCCCCCCCCCCc----CCCCC
No 85
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=23.57 E-value=2e+02 Score=21.94 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=21.6
Q ss_pred EEeEEccCceec-CCCceEEeccceEEeeccce
Q psy17098 79 ATGRCVENAEEV-GTPTYLCKGDGKWYLPSGGC 110 (204)
Q Consensus 79 v~G~CV~~A~~~-~~P~~~C~~~G~W~~p~g~C 110 (204)
|.=+|-++=... ....+.|+.+| |.. .-.|
T Consensus 93 v~~~C~~Gy~l~~G~~~~~C~~~g-Ws~-~P~C 123 (187)
T 2uwn_A 93 IDVACHPGYALPKAQTTVTCMENG-WSP-TPRC 123 (187)
T ss_dssp EECEECTTEECSSSCSEEEEETTE-EES-CSCC
T ss_pred EEEEcCCCCCccCCCeEEEecCCC-cCC-CCce
Confidence 555787766654 66799999999 985 3444
No 86
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=23.52 E-value=28 Score=23.68 Aligned_cols=20 Identities=30% Similarity=0.727 Sum_probs=15.5
Q ss_pred cCCCeecCCCceeccccCcc
Q psy17098 184 PSGGCKCKPGFEADVEKQTC 203 (204)
Q Consensus 184 p~g~C~C~~Gye~~~~~~~C 203 (204)
..-.|.|.+||+.+..+.+|
T Consensus 66 g~y~C~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 66 GSYRCECPPGHQLSPNISAC 85 (86)
T ss_dssp TEEEEESCTTSCCCSSSCCC
T ss_pred CCEEEECcCCcccCCCCCcc
Confidence 34579999999977666666
No 87
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=22.66 E-value=40 Score=25.35 Aligned_cols=46 Identities=24% Similarity=0.459 Sum_probs=34.4
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCcc----ccCCCeEEecccCeEE
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAE----EVGTPTYLCKGDGKWY 182 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~----~~~~P~~~C~~~G~W~ 182 (204)
..|+..+-+++=.|.|.+|. .|.-.|..--. ..+....+|..+| |.
T Consensus 48 ~~C~~twD~~~CWp~t~~G~------~v~~~CP~~~~~~~~~~g~v~R~C~~~G-Ws 97 (116)
T 2x57_A 48 KACSGVWDNITCWRPANVGE------TVTVPCPKVFSNFYSKAGNISKNCTSDG-WS 97 (116)
T ss_dssp CSBCCEEETTEEECCBCTTC------EEEEECCGGGGGGBSSCCEEEEEEETTE-EC
T ss_pred CCCCcccCcccccCCCCCCC------EEEecCcccccCccCCCCeEEeeCCccc-CC
Confidence 46899999999999999984 34567876543 1233468899999 96
No 88
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1
Probab=22.41 E-value=55 Score=23.92 Aligned_cols=46 Identities=24% Similarity=0.443 Sum_probs=35.0
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCccc------cCCCeEEecccCeEE
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAEE------VGTPTYLCKGDGKWY 182 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~~------~~~P~~~C~~~G~W~ 182 (204)
..|+..+-+++=.|.|.+|. .|.-.|..--.. .+....+|..+| |.
T Consensus 36 ~~C~~~wD~~~CWp~t~~G~------~v~~~CP~~~~~~~~~~~~g~v~R~C~~~G-Ws 87 (106)
T 2jod_A 36 PGCPGMWDNITCWKPAHVGE------MVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WS 87 (106)
T ss_dssp CBCCCEECSSCEECCCBTTC------CEEECCSCSSCCCSCCSCCSCEEECBCSSC-BC
T ss_pred CCCCcccCcccccCCCCCCC------EEEecCcchhcCCCCcCcCCeEEecCCccc-CC
Confidence 46999999999999999984 245678866531 124568899999 96
No 89
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=22.06 E-value=26 Score=26.72 Aligned_cols=20 Identities=30% Similarity=0.747 Sum_probs=15.1
Q ss_pred CCCeecCCCceeccccCccC
Q psy17098 185 SGGCKCKPGFEADVEKQTCN 204 (204)
Q Consensus 185 ~g~C~C~~Gye~~~~~~~C~ 204 (204)
.-.|.|.+||+....+.+|+
T Consensus 147 ~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 147 GFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp EEEEECCTTEEECTTSSCEE
T ss_pred CEEEeCCCCcEECCCCCccc
Confidence 46799999999665666663
No 90
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=21.49 E-value=35 Score=25.57 Aligned_cols=48 Identities=19% Similarity=0.434 Sum_probs=32.2
Q ss_pred ccCCccccccccCCCCCCCCceeeEEeeecccccCcc---ccCCCeEEecccCeEEc
Q psy17098 130 HACPETTINFAHFPTTPTGREVTFIEQATGRCVENAE---EVGTPTYLCKGDGKWYL 183 (204)
Q Consensus 130 ~~Cp~g~~k~A~Fp~T~~g~~~~slv~v~G~CV~na~---~~~~P~~~C~~~G~W~v 183 (204)
..|+..+-+.+=+|.|.+|. .|.-.|..--. ..+....+|..+|.|..
T Consensus 45 ~~C~~twD~~~CWp~t~~G~------~v~~~CP~~~~~f~~~g~v~R~C~~~G~W~~ 95 (115)
T 3n7s_A 45 VYCNRTWDGWLCWNDVAAGT------ESMQLCPDYFQDFDPSEKVTKICDQDGNWFR 95 (115)
T ss_dssp SEECCEECSSCEECCEETTC------EEEEECCSSSTTCCTTSEEEEEBCTTSCBCB
T ss_pred CCCcCcccccccCCCCCCCC------EEEecCchhhcCCCCCCcEEeecCCCCCccc
Confidence 46788888888888888764 23456654322 12335688999999974
No 91
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=20.68 E-value=35 Score=25.79 Aligned_cols=22 Identities=23% Similarity=0.723 Sum_probs=17.6
Q ss_pred ccCCCeecCCCceeccccCccC
Q psy17098 183 LPSGGCKCKPGFEADVEKQTCN 204 (204)
Q Consensus 183 vp~g~C~C~~Gye~~~~~~~C~ 204 (204)
+..-+|.|.+||+.+..+.+|+
T Consensus 141 ~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 141 FGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp SSCEEEECCTTCCBCTTTCBBC
T ss_pred CCCEEeeCCCCccCCCCCCccC
Confidence 3466899999999877777774
Done!