BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17125
(1281 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91092322|ref|XP_970208.1| PREDICTED: similar to CG5414 CG5414-PA [Tribolium castaneum]
Length = 920
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 284/643 (44%), Positives = 408/643 (63%), Gaps = 43/643 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY H SKS+++++K+NQ P E ++AL+WTTTPW+LPANQ + +N
Sbjct: 193 TALAEAELEYNEHHTSKSVFVRLKVNQFPNRSNE---QVYALVWTTTPWTLPANQTVCYN 249
Query: 478 PALEYSVASVKGANV--IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y + N I+A L NL T T+++ V +F + L +TY+HPI K+ R
Sbjct: 250 PTLQYCLVKNSKDNCLYIIASDLQANLSETLNTELEKVENFSSETLSHLTYVHPIYKD-R 308
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+++ +P+ +SSKGTGLVH APAHG +DFL+AL EK+ + NL+ + G Y+ +AG LEG
Sbjct: 309 NMRFVPSSHATSSKGTGLVHTAPAHGPEDFLVALNEKMQIENLVNDLGCYNTNAGKELEG 368
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
+L DG ++VL +++ D++ +Y HSYPYDWRTKKPVI++ASQQWF+DT+ IK A+
Sbjct: 369 KFVLEDGTEKVLQMIKEDIVHLHDYVHSYPYDWRTKKPVIIRASQQWFLDTDSIKNRAID 428
Query: 656 CLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANI 709
LE V +P + K+ L +QI +RPYWCISRQR WGVPIPVF++ D ++++E I
Sbjct: 429 LLENVEIIPKVNSQMYKRNLVNQIQKRPYWCISRQRKWGVPIPVFFNKSNDEVLISEDLI 488
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDVN----SNVTKSNDILDIWFDSGISWSHVLK- 764
+HFC LID HG DFWW + + L+ N + K DILDIWFDSGISW+ L+
Sbjct: 489 RHFCVLIDNHGTDFWWQIPTKHLIPEELRNGLQIDQIEKGQDILDIWFDSGISWAKALEG 548
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
DK A +Y+EG+DQ GWF SSLLTSVAL+ AP++ +++HGFVVDEKG KMSKSVGN++
Sbjct: 549 DKVADMYLEGVDQFTGWFQSSLLTSVALRDKAPYKTIYVHGFVVDEKGMKMSKSVGNIVD 608
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
DI QG K KK AYGVD LRWWVA HA++D I
Sbjct: 609 PLDIVQGTKN---------------------KK--AYGVDTLRWWVACHANQDALAHISN 645
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR--YVDVYMLKRLCEFQNTMDTLYG 942
N+L +S D++ KIRS +R+ LG L+++ S+ +D YML L F
Sbjct: 646 NVLQASADELHKIRSVIRFSLGCLYDYQHSSVDYKNLSLLDKYMLHLLYLFHEQALEAIN 705
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVA 1002
++++ + + ++N + N +SA Y+ +KDRLYCD ++ +R S L IF ++ + +
Sbjct: 706 DYRFQQICKSVINLLTNPVSALYYNGIKDRLYCDPLDSISRKSSQFVLLQIFEIVTQAIG 765
Query: 1003 PIMPHLAEEVYSHLPSRQG-TFSSFCHFKVYLQYSGSIAKRIL 1044
PI+PH EE++ HLP + G T+ + H K + + +++
Sbjct: 766 PIVPHFVEEMFLHLPHKNGKTYFTSTHSKAETCWKNDVVDKVM 808
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/396 (53%), Positives = 286/396 (72%), Gaps = 10/396 (2%)
Query: 4 FSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
F +LY WQR L +PEF+LHDGPPYANG H+GHA+NKILKD LR ++L+G +VHYVP
Sbjct: 40 FDQLYKWQRSYL-SEPEFVLHDGPPYANGKLHMGHALNKILKDTILRYHILKGHKVHYVP 98
Query: 64 GWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
GWDCHGLPIELKA++ L+IR KA++FA TI QK F+SWGV+ DW +N Y
Sbjct: 99 GWDCHGLPIELKALSKPGA--EALEIRSKARSFAKNTIKDQKTIFQSWGVMGDW-NNHYA 155
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T++ +YVK QL F LY+++ IYRD KP+YWSPSSRTALAE+ELEY H SKS+++++
Sbjct: 156 TYNPDYVKIQLKLFNKLYQKNLIYRDFKPIYWSPSSRTALAEAELEYNEHHTSKSVFVRL 215
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV--IVAKCL 241
K+NQ P E ++AL+WTTTPW+LPANQ + +NP L+Y + N I+A L
Sbjct: 216 KVNQFPNRSNE---QVYALVWTTTPWTLPANQTVCYNPTLQYCLVKNSKDNCLYIIASDL 272
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
+L T T++E V +F + L +TY+HPI K+ R+++ +P+ +SSKGTGLVH AP
Sbjct: 273 QANLSETLNTELEKVENFSSETLSHLTYVHPIYKD-RNMRFVPSSHATSSKGTGLVHTAP 331
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
AHG +DFL+AL EK+ + NL+ + G Y+ +AG LEG +L DG ++VL +++ D++
Sbjct: 332 AHGPEDFLVALNEKMQIENLVNDLGCYNTNAGKELEGKFVLEDGTEKVLQMIKEDIVHLH 391
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y HSYPYDWRTKKPVI++ASQQWF+DT+ IK A+
Sbjct: 392 DYVHSYPYDWRTKKPVIIRASQQWFLDTDSIKNRAI 427
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 118/163 (72%), Gaps = 6/163 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
NL+ + G Y+ +AG LEG +L +G ++VL +++ D++ +Y HSYPYDWRTKKPVI+
Sbjct: 350 NLVNDLGCYNTNAGKELEGKFVLEDGTEKVLQMIKEDIVHLHDYVHSYPYDWRTKKPVII 409
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+ASQQWF+DT+ IK A+ LE V +P + K++L +QI +RPYWCISRQR WGVP
Sbjct: 410 RASQQWFLDTDSIKNRAIDLLENVEIIPKVNSQMYKRNLVNQIQKRPYWCISRQRKWGVP 469
Query: 1223 IPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IPVF++ D ++++E I+HFC LID HG DFWW +P + L+
Sbjct: 470 IPVFFNKSNDEVLISEDLIRHFCVLIDNHGTDFWWQIPTKHLI 512
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 1033 LQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQG 1092
L Y+G K LYCD ++ +R S L IF ++ + + PI+PH EE++ HLP + G
Sbjct: 727 LYYNG--IKDRLYCDPLDSISRKSSQFVLLQIFEIVTQAIGPIVPHFVEEMFLHLPHKNG 784
Query: 1093 -TFSSFCHFK 1101
T+ + H K
Sbjct: 785 KTYFTSTHSK 794
>gi|270015688|gb|EFA12136.1| hypothetical protein TcasGA2_TC002282 [Tribolium castaneum]
Length = 896
Score = 561 bits (1445), Expect = e-156, Method: Compositional matrix adjust.
Identities = 284/643 (44%), Positives = 408/643 (63%), Gaps = 43/643 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY H SKS+++++K+NQ P E ++AL+WTTTPW+LPANQ + +N
Sbjct: 169 TALAEAELEYNEHHTSKSVFVRLKVNQFPNRSNE---QVYALVWTTTPWTLPANQTVCYN 225
Query: 478 PALEYSVASVKGANV--IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y + N I+A L NL T T+++ V +F + L +TY+HPI K+ R
Sbjct: 226 PTLQYCLVKNSKDNCLYIIASDLQANLSETLNTELEKVENFSSETLSHLTYVHPIYKD-R 284
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+++ +P+ +SSKGTGLVH APAHG +DFL+AL EK+ + NL+ + G Y+ +AG LEG
Sbjct: 285 NMRFVPSSHATSSKGTGLVHTAPAHGPEDFLVALNEKMQIENLVNDLGCYNTNAGKELEG 344
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
+L DG ++VL +++ D++ +Y HSYPYDWRTKKPVI++ASQQWF+DT+ IK A+
Sbjct: 345 KFVLEDGTEKVLQMIKEDIVHLHDYVHSYPYDWRTKKPVIIRASQQWFLDTDSIKNRAID 404
Query: 656 CLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANI 709
LE V +P + K+ L +QI +RPYWCISRQR WGVPIPVF++ D ++++E I
Sbjct: 405 LLENVEIIPKVNSQMYKRNLVNQIQKRPYWCISRQRKWGVPIPVFFNKSNDEVLISEDLI 464
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS----NVTKSNDILDIWFDSGISWSHVLK- 764
+HFC LID HG DFWW + + L+ N + K DILDIWFDSGISW+ L+
Sbjct: 465 RHFCVLIDNHGTDFWWQIPTKHLIPEELRNGLQIDQIEKGQDILDIWFDSGISWAKALEG 524
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
DK A +Y+EG+DQ GWF SSLLTSVAL+ AP++ +++HGFVVDEKG KMSKSVGN++
Sbjct: 525 DKVADMYLEGVDQFTGWFQSSLLTSVALRDKAPYKTIYVHGFVVDEKGMKMSKSVGNIVD 584
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
DI QG K KK AYGVD LRWWVA HA++D I
Sbjct: 585 PLDIVQGTKN---------------------KK--AYGVDTLRWWVACHANQDALAHISN 621
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR--YVDVYMLKRLCEFQNTMDTLYG 942
N+L +S D++ KIRS +R+ LG L+++ S+ +D YML L F
Sbjct: 622 NVLQASADELHKIRSVIRFSLGCLYDYQHSSVDYKNLSLLDKYMLHLLYLFHEQALEAIN 681
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVA 1002
++++ + + ++N + N +SA Y+ +KDRLYCD ++ +R S L IF ++ + +
Sbjct: 682 DYRFQQICKSVINLLTNPVSALYYNGIKDRLYCDPLDSISRKSSQFVLLQIFEIVTQAIG 741
Query: 1003 PIMPHLAEEVYSHLPSRQG-TFSSFCHFKVYLQYSGSIAKRIL 1044
PI+PH EE++ HLP + G T+ + H K + + +++
Sbjct: 742 PIVPHFVEEMFLHLPHKNGKTYFTSTHSKAETCWKNDVVDKVM 784
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/396 (53%), Positives = 286/396 (72%), Gaps = 10/396 (2%)
Query: 4 FSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
F +LY WQR L +PEF+LHDGPPYANG H+GHA+NKILKD LR ++L+G +VHYVP
Sbjct: 16 FDQLYKWQRSYL-SEPEFVLHDGPPYANGKLHMGHALNKILKDTILRYHILKGHKVHYVP 74
Query: 64 GWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
GWDCHGLPIELKA++ L+IR KA++FA TI QK F+SWGV+ DW +N Y
Sbjct: 75 GWDCHGLPIELKALSKPGA--EALEIRSKARSFAKNTIKDQKTIFQSWGVMGDW-NNHYA 131
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T++ +YVK QL F LY+++ IYRD KP+YWSPSSRTALAE+ELEY H SKS+++++
Sbjct: 132 TYNPDYVKIQLKLFNKLYQKNLIYRDFKPIYWSPSSRTALAEAELEYNEHHTSKSVFVRL 191
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV--IVAKCL 241
K+NQ P E ++AL+WTTTPW+LPANQ + +NP L+Y + N I+A L
Sbjct: 192 KVNQFPNRSNE---QVYALVWTTTPWTLPANQTVCYNPTLQYCLVKNSKDNCLYIIASDL 248
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
+L T T++E V +F + L +TY+HPI K+ R+++ +P+ +SSKGTGLVH AP
Sbjct: 249 QANLSETLNTELEKVENFSSETLSHLTYVHPIYKD-RNMRFVPSSHATSSKGTGLVHTAP 307
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
AHG +DFL+AL EK+ + NL+ + G Y+ +AG LEG +L DG ++VL +++ D++
Sbjct: 308 AHGPEDFLVALNEKMQIENLVNDLGCYNTNAGKELEGKFVLEDGTEKVLQMIKEDIVHLH 367
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y HSYPYDWRTKKPVI++ASQQWF+DT+ IK A+
Sbjct: 368 DYVHSYPYDWRTKKPVIIRASQQWFLDTDSIKNRAI 403
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 118/163 (72%), Gaps = 6/163 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
NL+ + G Y+ +AG LEG +L +G ++VL +++ D++ +Y HSYPYDWRTKKPVI+
Sbjct: 326 NLVNDLGCYNTNAGKELEGKFVLEDGTEKVLQMIKEDIVHLHDYVHSYPYDWRTKKPVII 385
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+ASQQWF+DT+ IK A+ LE V +P + K++L +QI +RPYWCISRQR WGVP
Sbjct: 386 RASQQWFLDTDSIKNRAIDLLENVEIIPKVNSQMYKRNLVNQIQKRPYWCISRQRKWGVP 445
Query: 1223 IPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IPVF++ D ++++E I+HFC LID HG DFWW +P + L+
Sbjct: 446 IPVFFNKSNDEVLISEDLIRHFCVLIDNHGTDFWWQIPTKHLI 488
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 1033 LQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQG 1092
L Y+G K LYCD ++ +R S L IF ++ + + PI+PH EE++ HLP + G
Sbjct: 703 LYYNG--IKDRLYCDPLDSISRKSSQFVLLQIFEIVTQAIGPIVPHFVEEMFLHLPHKNG 760
Query: 1093 -TFSSFCHFK 1101
T+ + H K
Sbjct: 761 KTYFTSTHSK 770
>gi|307205447|gb|EFN83779.1| Isoleucyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
Length = 954
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 272/616 (44%), Positives = 381/616 (61%), Gaps = 39/616 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAF 476
TALAESELEY H SKS+ ++++L+ +P++L G+ LHALIWTTTPW+L ANQ IAF
Sbjct: 222 TALAESELEYNESHRSKSVIVRMQLDTLPSNLKSLGSKALHALIWTTTPWTLIANQAIAF 281
Query: 477 NPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+ + Y V N+ I+A+ V +++ + + GQ L ++ Y+HPI KE+
Sbjct: 282 SNDIVYCVVEDSSKNLYIIAQDSVTSVEKKL-GPLKAIATVKGQELAEVRYLHPITKER- 339
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L LP V++S GTGLVH APAHG +DFL+A+ I VL+L+ ++G Y+ +AG G
Sbjct: 340 -LPFLPGAHVTNSVGTGLVHIAPAHGPEDFLVAIENNISVLSLVDDEGCYTKEAGDKFAG 398
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
LN+L DG D++L+ + DVL + HSYPYDWRTKKP+I++AS QWFID + IK EA+
Sbjct: 399 LNVLTDGADKILNYIAADVLHADTVTHSYPYDWRTKKPIIIRASHQWFIDVKSIKEEAID 458
Query: 656 CLEEVNFVPESAKKT----LRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
+ + P+ + + L QI QRPYWCISRQR WG PIPV Y+ T + N +
Sbjct: 459 SIANIRIYPQQNQTSYLNALLAQIKQRPYWCISRQRSWGTPIPVLYNKQTGDVFTNRKWV 518
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNT------SDVNSNVTKSNDILDIWFDSGISWSHVL 763
+ C L + +GPD+WW LS E+L+ +D N+ K DI+DIW DSG+SWS VL
Sbjct: 519 ERLCKLTERYGPDYWWELSTEKLIGRELRQELTDNIDNLEKGTDIMDIWLDSGLSWSSVL 578
Query: 764 KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+ A +Y+EGMDQ GWF SSLLTS+AL+ P+ +F+HGF VD+K AKMSKS+GNV+
Sbjct: 579 PEHKADLYLEGMDQFRGWFQSSLLTSIALQKRPPYSALFVHGFAVDDKAAKMSKSIGNVV 638
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
IT+G + K P YGVD LRWWVA+HA + VP+
Sbjct: 639 DPEIITKGG--------------------ENTSKNPTYGVDTLRWWVASHACQHTQVPVS 678
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR--YVDVYMLKRLCEFQNTMDTLY 941
+L S + +QK+R LR+LLGVLH++S Y+D YML L ++ + LY
Sbjct: 679 TTLLRESHECIQKLRLILRFLLGVLHSYSAGVSVEPEYLYLDKYMLYALRQYDEEIQRLY 738
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
++ Y AS+++++F+ N +S+ Y L+KDRLYCD RL+ + VL R++
Sbjct: 739 DDYLYHHASKLVMHFLANTVSSVYCHLIKDRLYCDKAASPTRLAAVEVTRETLTVLARSI 798
Query: 1002 APIMPHLAEEVYSHLP 1017
API+PHLAEE + H P
Sbjct: 799 APIVPHLAEEAWLHHP 814
Score = 437 bits (1125), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/408 (52%), Positives = 291/408 (71%), Gaps = 10/408 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGF ELY WQR+ L+G P+F+LHDGPPYANG PH+GHA+NKILKDITLRS +++G+RVH
Sbjct: 63 KCGFLELYKWQRKNLSG-PDFVLHDGPPYANGEPHMGHAINKILKDITLRSKIIRGRRVH 121
Query: 61 YVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EH 119
YVPGWDCHGLPIELKA+ K + L+IR+KA+N+ + I Q+ F SWG +ADW E
Sbjct: 122 YVPGWDCHGLPIELKALGDM-KNVGALEIRRKARNYVSDAIAKQREVFMSWGAIADWSES 180
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
CY T Y+KNQL QF NLY++ +YR KPV+WSPSS+TALAESELEY H SKS+
Sbjct: 181 GCYFTNHPSYIKNQLQQFINLYEKGLVYRAFKPVHWSPSSKTALAESELEYNESHRSKSV 240
Query: 180 YLKIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IV 237
++++L+ +P++L G+ LHALIWTTTPW+L ANQ IAF+ + Y V N+ I+
Sbjct: 241 IVRMQLDTLPSNLKSLGSKALHALIWTTTPWTLIANQAIAFSNDIVYCVVEDSSKNLYII 300
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A+ V S++ ++ + GQ L ++ Y+HPI KE+ L LP V++S GTGLV
Sbjct: 301 AQDSVTSVEKKL-GPLKAIATVKGQELAEVRYLHPITKER--LPFLPGAHVTNSVGTGLV 357
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL+A+ I VL+L+ ++G Y+ +AG GLN+L DG D++L+ + DV
Sbjct: 358 HIAPAHGPEDFLVAIENNISVLSLVDDEGCYTKEAGDKFAGLNVLTDGADKILNYIAADV 417
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
L + HSYPYDWRTKKP+I++AS QWFID + IK EA+ ++ NI
Sbjct: 418 LHADTVTHSYPYDWRTKKPIIIRASHQWFIDVKSIKEEAI--DSIANI 463
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVI 1165
L+L+ ++G Y+ +AG GLN+L +G D++L+ + DVL + HSYPYDWRTKKP+I
Sbjct: 379 LSLVDDEGCYTKEAGDKFAGLNVLTDGADKILNYIAADVLHADTVTHSYPYDWRTKKPII 438
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKS----LRDQIAQRPYWCISRQRVWGV 1221
++AS QWFID + IK EA+ + + P+ + S L QI QRPYWCISRQR WG
Sbjct: 439 IRASHQWFIDVKSIKEEAIDSIANIRIYPQQNQTSYLNALLAQIKQRPYWCISRQRSWGT 498
Query: 1222 PIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PIPV Y+ T + N ++ C L + +GPD+WW L E+L+
Sbjct: 499 PIPVLYNKQTGDVFTNRKWVERLCKLTERYGPDYWWELSTEKLI 542
>gi|340725121|ref|XP_003400922.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Bombus
terrestris]
Length = 963
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/625 (42%), Positives = 379/625 (60%), Gaps = 38/625 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAF 476
TALAESELEY H SK++ +++++N +P L ++ALIWTTT WSL ANQ I+F
Sbjct: 231 TALAESELEYNQQHQSKAVTVRLRINDIPERLKSFKNRAVYALIWTTTSWSLVANQAISF 290
Query: 477 NPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+ Y +A N+ IVAK L+ + + + F G+ L+ TY HP +++
Sbjct: 291 SSDATYCLAEDDKRNLYIVAKELLGATESKIGP-LKPIVSFEGKELEGSTYFHPFTEQK- 348
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
LL A V+++ GTGLVH APAHG +DFL+AL KIP+L+++ ++G Y+ +AGP G
Sbjct: 349 -CPLLAASHVTTNAGTGLVHTAPAHGPEDFLVALKNKIPILSIVDSKGLYTKEAGPEFYG 407
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
L +L +G D+V++L+ D+L E HSYPYDWRTK+P++++AS QWFI+ I+ + +
Sbjct: 408 LEVLTEGVDKVMNLLARDILHVETLTHSYPYDWRTKQPILIRASHQWFININSIREKIIE 467
Query: 656 CLEEVNFVPESAKKT----LRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
+ VN P+ + + L I RPYWCISRQR WG PIPV Y T N+ +
Sbjct: 468 NVANVNVYPKCNRTSFMSALLAGIRNRPYWCISRQRSWGTPIPVIYSKTTGLAFTNKELV 527
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVL 763
+ C ID +GPD WW SV L+ + ++ K NDI+DIWFDSGISWS VL
Sbjct: 528 ERLCDSIDRYGPDCWWEYSVRDLIGLDIIKKLNIDPDDIVKGNDIMDIWFDSGISWSMVL 587
Query: 764 KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
DK A++Y+EG DQ NGWF SSL+TSVAL+ P+ ++F+HGF VDEKG KMSKS+GNVI
Sbjct: 588 PDKKANLYLEGYDQFNGWFQSSLITSVALQGCPPYSDLFVHGFAVDEKGLKMSKSIGNVI 647
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ +I G L KK PAYGVD+LRWWVA H S+ VP+
Sbjct: 648 NPEEILLGGSNL--------------------KKNPAYGVDILRWWVANHGSQHTQVPVS 687
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNH-SESTGSISRYVDVYMLKRLCEFQNTMDTLYG 942
KN+L+ + V K+R LR+LLG LH+H + R +D YML L + M Y
Sbjct: 688 KNLLDECKTCVNKLRLILRFLLGTLHHHPGINCKPEYRIIDKYMLYLLYSYNKQMQQCYN 747
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVA 1002
++Y A + +++F+ N++S Y T++KDRLYCD + R + + + I +VL+R++A
Sbjct: 748 NYEYHHAGKTIMHFITNDVSGLYCTIIKDRLYCDEVTSSMRTAAVQVIKEILNVLIRSIA 807
Query: 1003 PIMPHLAEEVYSHLPSRQGTFSSFC 1027
PI+PHLAEE + + P + C
Sbjct: 808 PILPHLAEEAWLYHPENIASIPLHC 832
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/408 (50%), Positives = 283/408 (69%), Gaps = 9/408 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELY WQ++ L+G P+F+LHDGPPYANG PH+GH +NKILKD+TLR ++ G R+H
Sbjct: 71 KCGFSELYEWQKKNLSG-PDFVLHDGPPYANGIPHMGHVINKILKDVTLRHKIMNGNRIH 129
Query: 61 YVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EH 119
YVPGWDCHGLPIELKA + PL+IRKKA+N+ E I QK F+SWGV A+W E
Sbjct: 130 YVPGWDCHGLPIELKATKGYESENDPLEIRKKARNYTKEAIARQKQAFQSWGVTANWSES 189
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
CY T Y+KN+L QF LY++D I+RD PVYWSPSSRTALAESELEY H SK++
Sbjct: 190 ECYFTSHSSYMKNELHQFIKLYEKDIIFRDFMPVYWSPSSRTALAESELEYNQQHQSKAV 249
Query: 180 YLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IV 237
+++++N +P L ++ALIWTTT WSL ANQ I+F+ Y +A N+ IV
Sbjct: 250 TVRLRINDIPERLKSFKNRAVYALIWTTTSWSLVANQAISFSSDATYCLAEDDKRNLYIV 309
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
AK L+ + + ++ + F G+ L+ TY HP +++ LL A V+++ GTGLV
Sbjct: 310 AKELLGATESKI-GPLKPIVSFEGKELEGSTYFHPFTEQK--CPLLAASHVTTNAGTGLV 366
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL+AL KIP+L+++ ++G Y+ +AGP GL +L +G D+V++L+ D+
Sbjct: 367 HTAPAHGPEDFLVALKNKIPILSIVDSKGLYTKEAGPEFYGLEVLTEGVDKVMNLLARDI 426
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
L E HSYPYDWRTK+P++++AS QWFI+ I+ + + + V N+
Sbjct: 427 LHVETLTHSYPYDWRTKQPILIRASHQWFININSIREK--IIENVANV 472
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 100/164 (60%), Gaps = 6/164 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVI 1165
L+++ ++G Y+ +AGP GL +L EG D+V++L+ D+L E HSYPYDWRTK+P++
Sbjct: 388 LSIVDSKGLYTKEAGPEFYGLEVLTEGVDKVMNLLARDILHVETLTHSYPYDWRTKQPIL 447
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKS----LRDQIAQRPYWCISRQRVWGV 1221
++AS QWFI+ I+ + + + VN P+ + S L I RPYWCISRQR WG
Sbjct: 448 IRASHQWFININSIREKIIENVANVNVYPKCNRTSFMSALLAGIRNRPYWCISRQRSWGT 507
Query: 1222 PIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PIPV Y T N+ ++ C ID +GPD WW V L+
Sbjct: 508 PIPVIYSKTTGLAFTNKELVERLCDSIDRYGPDCWWEYSVRDLI 551
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
+I K LYCD + R + + + I +VL+R++API+PHLAEE + + P +
Sbjct: 772 TIIKDRLYCDEVTSSMRTAAVQVIKEILNVLIRSIAPILPHLAEEAWLYHPENIASIPLH 831
Query: 1098 C 1098
C
Sbjct: 832 C 832
>gi|350416933|ref|XP_003491175.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Bombus
impatiens]
Length = 963
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/625 (42%), Positives = 380/625 (60%), Gaps = 38/625 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAF 476
TALAESELEY H SK++ +++++N +P L ++ALIWTTT WSL ANQ I+F
Sbjct: 231 TALAESELEYNQQHQSKAVTVRLRINDIPERLKSFKNHAVYALIWTTTSWSLVANQAISF 290
Query: 477 NPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+ Y +A ++ IVAK L+ + + + F G+ L+ TY HP +++
Sbjct: 291 SSDATYCLAEDDKKDLYIVAKELLGTTESKIGP-LKPIVSFEGKELEGSTYFHPFTEQK- 348
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
LL A V++++GTGLVH APAHG +DFL+AL KIP+L+++ ++G Y+ +AGP G
Sbjct: 349 -CPLLAASHVTTNEGTGLVHTAPAHGPEDFLVALKNKIPILSMVDSKGLYTEEAGPEFYG 407
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
L +L +G D+V++L+ D+L E HSYPYDWRTK+PV+++AS QWFI+ I+ + +
Sbjct: 408 LEVLTEGVDKVMNLLARDILHVETLTHSYPYDWRTKQPVLIRASHQWFININTIREKIIE 467
Query: 656 CLEEVNFVPESAKKTLRDQ----IAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
VN P+ + + + I RPYWCISRQR WG PIPV Y T N+ +
Sbjct: 468 NFANVNVYPKCNRTSFMNALLAGIRNRPYWCISRQRSWGTPIPVIYSKTTGLAFTNKELV 527
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDVN------SNVTKSNDILDIWFDSGISWSHVL 763
+ C ID +GPD WW SV L+ + +++ K NDI+DIWFDSGISWS VL
Sbjct: 528 ERLCDSIDRYGPDCWWEYSVRDLIGLDIIKKLNIDPNDIVKGNDIMDIWFDSGISWSMVL 587
Query: 764 KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
DK A++Y+EG DQ NGWF SSL+TSVAL+ P+ ++F+HGF VDEKG KMSKS+GNVI
Sbjct: 588 PDKKANLYLEGYDQFNGWFQSSLITSVALQGCPPYSDLFVHGFAVDEKGLKMSKSIGNVI 647
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ +I G L KK PAYGVDVLRWWVA H+S+ VP+
Sbjct: 648 NPEEILLGGSNL--------------------KKNPAYGVDVLRWWVANHSSQHTQVPVS 687
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSE-STGSISRYVDVYMLKRLCEFQNTMDTLYG 942
KN+L+ + + K+R LR+LLG LH+H + R +D YML L + M Y
Sbjct: 688 KNLLDECKTSINKLRLILRFLLGTLHHHPGINCKPEYRIIDKYMLYLLYSYNKQMQQHYN 747
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVA 1002
++Y A + ++F+ N++S Y T++KDRLYCD + R + + + I +VL+R++A
Sbjct: 748 NYEYHHAGKTTMHFITNDVSGLYCTIIKDRLYCDEVTSSMRTAAVQVIKEILNVLIRSIA 807
Query: 1003 PIMPHLAEEVYSHLPSRQGTFSSFC 1027
PI+PHLAEE + + P + C
Sbjct: 808 PILPHLAEEAWLYHPENITSIPLHC 832
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/400 (51%), Positives = 282/400 (70%), Gaps = 7/400 (1%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELY WQ++ L+G P+F+LHDGPPYANG PH+GH +NKILKD+TLR ++ G R+H
Sbjct: 71 KCGFSELYEWQKKNLSG-PDFVLHDGPPYANGIPHMGHVINKILKDVTLRHKIINGNRIH 129
Query: 61 YVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EH 119
YVPGWDCHGLPIELKAI + PL+IRKKA+N+A E I QK F+SWGV A+W E
Sbjct: 130 YVPGWDCHGLPIELKAIKGYESENDPLEIRKKARNYAEEAIARQKQAFQSWGVTANWSES 189
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
CY T Y+KN+L QF LY++D I+RD PVYWSPSSRTALAESELEY H SK++
Sbjct: 190 ECYFTSHSSYMKNELHQFIKLYEKDIIFRDFMPVYWSPSSRTALAESELEYNQQHQSKAV 249
Query: 180 YLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IV 237
+++++N +P L ++ALIWTTT WSL ANQ I+F+ Y +A ++ IV
Sbjct: 250 TVRLRINDIPERLKSFKNHAVYALIWTTTSWSLVANQAISFSSDATYCLAEDDKKDLYIV 309
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
AK L+ + + ++ + F G+ L+ TY HP +++ LL A V++++GTGLV
Sbjct: 310 AKELLGTTESKIGP-LKPIVSFEGKELEGSTYFHPFTEQK--CPLLAASHVTTNEGTGLV 366
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL+AL KIP+L+++ ++G Y+ +AGP GL +L +G D+V++L+ D+
Sbjct: 367 HTAPAHGPEDFLVALKNKIPILSMVDSKGLYTEEAGPEFYGLEVLTEGVDKVMNLLARDI 426
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E HSYPYDWRTK+PV+++AS QWFI+ I+ + +
Sbjct: 427 LHVETLTHSYPYDWRTKQPVLIRASHQWFININTIREKII 466
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 99/164 (60%), Gaps = 6/164 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVI 1165
L+++ ++G Y+ +AGP GL +L EG D+V++L+ D+L E HSYPYDWRTK+PV+
Sbjct: 388 LSMVDSKGLYTEEAGPEFYGLEVLTEGVDKVMNLLARDILHVETLTHSYPYDWRTKQPVL 447
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQ----IAQRPYWCISRQRVWGV 1221
++AS QWFI+ I+ + + VN P+ + S + I RPYWCISRQR WG
Sbjct: 448 IRASHQWFININTIREKIIENFANVNVYPKCNRTSFMNALLAGIRNRPYWCISRQRSWGT 507
Query: 1222 PIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PIPV Y T N+ ++ C ID +GPD WW V L+
Sbjct: 508 PIPVIYSKTTGLAFTNKELVERLCDSIDRYGPDCWWEYSVRDLI 551
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
+I K LYCD + R + + + I +VL+R++API+PHLAEE + + P +
Sbjct: 772 TIIKDRLYCDEVTSSMRTAAVQVIKEILNVLIRSIAPILPHLAEEAWLYHPENITSIPLH 831
Query: 1098 C 1098
C
Sbjct: 832 C 832
>gi|193788707|ref|NP_001123293.1| mitochondrial isoleucine tRNA synthetase [Nasonia vitripennis]
Length = 960
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/629 (44%), Positives = 391/629 (62%), Gaps = 45/629 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY+ +H SK +++ + ++P+ L +G + + L WTTTPW+L ANQ +A
Sbjct: 232 TALAEAELEYRDNHQSKCATVRLPIVELPSKLAAFQGKS-IFGLTWTTTPWTLVANQALA 290
Query: 476 FNPALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
++ +Y +A N ++ + L +N++ Q ++VV F G L Y HPI
Sbjct: 291 YSLDADYCLAEDDEGNLYILAVELLEKNIEKIGQ--LNVVTTFSGNDLAGAKYSHPITG- 347
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
L LP V++ +GTGLVH APAHGQ+DFL+AL IPVL+L+ +GKY+ +AG
Sbjct: 348 -ITLPFLPGDHVNTEQGTGLVHTAPAHGQEDFLVALENSIPVLSLVDEEGKYTAEAGSDF 406
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
GL +L G D V+ + ++L TE HSYPYDWRTKKP+I++AS QWFIDT IK +A
Sbjct: 407 HGLKVLEQGTDAVIARINKNILHTETISHSYPYDWRTKKPIIVRASHQWFIDTNSIKDQA 466
Query: 654 LACLEEVNFVPESAKKT----LRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
+ C+E VN P + + L Q+ QRPYWCISRQRVWG PIPV Y DT I + +
Sbjct: 467 MKCIENVNIYPAQHRTSWTNALLTQLKQRPYWCISRQRVWGTPIPVLYYKDTGKIFITKE 526
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLN---TSDVN---SNVTKSNDILDIWFDSGISWSH 761
I+ C L++++GPD WW L VE+LL +++N S K +DILDIWFDSGISWS
Sbjct: 527 WIERLCELLEKYGPDCWWELPVEKLLGKRLCAELNLSGSEFRKGDDILDIWFDSGISWSA 586
Query: 762 VLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
VL +K A++YMEGMDQ GWF SSLLTSVAL+ AP++++F+HGF VDEK KMSKS+GN
Sbjct: 587 VLPEKKANLYMEGMDQFTGWFQSSLLTSVALQDCAPYQDLFVHGFAVDEKNNKMSKSLGN 646
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
V+ +I +G K + K PAYGVDVLRWWVA H ++ VP
Sbjct: 647 VVDPEEIVKGGKDM--------------------NKKPAYGVDVLRWWVANHGTQHTLVP 686
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTM 937
+ ++L S D V K+R R+LLG LH + E+ Y+D YML +L + +
Sbjct: 687 MKNSLLQGSADTVHKLRLVFRFLLGALHTYDENKNITVEPQYHYLDKYMLHQLYHYHQEI 746
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+LY ++QY S+ ++NF+ N++SA Y ++KDR+YC+ I+ RL L + I +
Sbjct: 747 QSLYEKYQYHNVSKTVVNFITNDVSAVYCHMIKDRIYCEKIDSPYRLGALDVIGEILSIT 806
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
R++API+PHLAEEV+ H P + F
Sbjct: 807 TRSIAPILPHLAEEVWLHHPENLASVPIF 835
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/413 (51%), Positives = 284/413 (68%), Gaps = 14/413 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELY+WQR L G P+F+LHDGPPYANG PH+GH +NK+LKDIT+RS +++G+RVH
Sbjct: 69 KCGFSELYNWQRANLEG-PDFVLHDGPPYANGDPHMGHTINKVLKDITIRSKVIKGQRVH 127
Query: 61 YVPGWDCHGLPIELKAITSKDKL---LSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
YVPGWDCHGLPIELKA+TS K L+P+ IR +A+ FA + +N Q+ F SWGV+ADW
Sbjct: 128 YVPGWDCHGLPIELKALTSAKKRVSELTPMQIRAQARKFAEDAVNKQRQVFSSWGVMADW 187
Query: 118 EHN-CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVS 176
+ N CY T Y+ NQL QFYNLY+++ +YRD KPV+WSPSSRTALAE+ELEY+ +H S
Sbjct: 188 KDNGCYFTNTVAYIVNQLNQFYNLYEKNLVYRDFKPVHWSPSSRTALAEAELEYRDNHQS 247
Query: 177 KSIYLKIKLNQVPAHL--LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
K +++ + ++P+ L +G + + L WTTTPW+L ANQ +A++ +Y +A N
Sbjct: 248 KCATVRLPIVELPSKLAAFQGKS-IFGLTWTTTPWTLVANQALAYSLDADYCLAEDDEGN 306
Query: 235 VIVAKCLVESLKWTFQT--DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
+ + VE L+ + + VV F G L Y HPI L LP V++ +
Sbjct: 307 LYILA--VELLEKNIEKIGQLNVVTTFSGNDLAGAKYSHPITG--ITLPFLPGDHVNTEQ 362
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHGQ+DFL+AL IPVL+L+ +GKY+ +AG GL +L G D V+
Sbjct: 363 GTGLVHTAPAHGQEDFLVALENSIPVLSLVDEEGKYTAEAGSDFHGLKVLEQGTDAVIAR 422
Query: 353 VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+ ++L TE HSYPYDWRTKKP+I++AS QWFIDT IK +A+ C NI
Sbjct: 423 INKNILHTETISHSYPYDWRTKKPIIVRASHQWFIDTNSIKDQAMKCIENVNI 475
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVI 1165
L+L+ +GKY+ +AG GL +L +G D V+ + ++L TE HSYPYDWRTKKP+I
Sbjct: 389 LSLVDEEGKYTAEAGSDFHGLKVLEQGTDAVIARINKNILHTETISHSYPYDWRTKKPII 448
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKS----LRDQIAQRPYWCISRQRVWGV 1221
++AS QWFIDT IK +A+ C+E VN P + S L Q+ QRPYWCISRQRVWG
Sbjct: 449 VRASHQWFIDTNSIKDQAMKCIENVNIYPAQHRTSWTNALLTQLKQRPYWCISRQRVWGT 508
Query: 1222 PIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PIPV Y DT I + + I+ C L++++GPD WW LPVE+LL
Sbjct: 509 PIPVLYYKDTGKIFITKEWIERLCELLEKYGPDCWWELPVEKLL 552
>gi|307191176|gb|EFN74873.1| Isoleucyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
Length = 934
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/635 (42%), Positives = 384/635 (60%), Gaps = 45/635 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP-AHLLEGATD--LHALIWTTTPWSLPANQFI 474
TALAESELEY H SKS+ ++++L+ + L+ + L+ALIWTTTPWSL ANQ I
Sbjct: 198 TALAESELEYNESHKSKSVIIRMQLDACTLSSKLKNLENKPLYALIWTTTPWSLIANQAI 257
Query: 475 AFNPALEYSVA--SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
AF+ + Y + ++K ++ +CL + + ++ GQ L + Y PI +
Sbjct: 258 AFSSNIVYCIVEDNLKNLYILAQECLTSIEQKL--GPLKLITTITGQELSEAKYFQPITR 315
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
E+ L LP V++S GTGLVH APAHG +DFL+A+ IPVL+LI + G + + G
Sbjct: 316 ER--LPFLPGQHVTTSVGTGLVHTAPAHGPEDFLIAVENNIPVLSLIDDDGCFIRETGDE 373
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
GL++L DG +++LH + +VL T+ HSYPYDWRTKKPVI++AS QWFID IK
Sbjct: 374 FAGLDVLTDGANKILHHISENVLHTDMITHSYPYDWRTKKPVIIRASHQWFIDINSIKEA 433
Query: 653 ALACLEEVNFVPE----SAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNE 706
A+ + + PE S L Q+ QRPYWCISRQR WG PIP+ Y+ T I +
Sbjct: 434 AIDSIANIRIYPEQNYTSYLNALLAQVKQRPYWCISRQRSWGTPIPILYNKRTGDIYTSR 493
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTS---DVNSN----VTKSNDILDIWFDSGISW 759
I+ C L++ +G D+WW LSVE+L+ ++N N + K DI+DIW DSG+SW
Sbjct: 494 KWIERLCKLMERYGTDYWWELSVEKLIGRELRQELNGNNIDDLEKGMDIMDIWLDSGLSW 553
Query: 760 SHVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
S VL + A +Y+EGMDQ GWF SSLLTS+AL+ +P+ +F+HGF VD+K +KMSKS+
Sbjct: 554 SAVLPEYKADLYLEGMDQCRGWFQSSLLTSIALQGRSPYNALFVHGFAVDDKASKMSKSI 613
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+++ +IT+G + L K PAYGVD LRWWVA+H +
Sbjct: 614 GNVVNSEEITKGGENL--------------------NKNPAYGVDTLRWWVASHGCQHSQ 653
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYV--DVYMLKRLCEFQNTM 937
VP+ +L S + +QK+R LR+LLGVLH+++E YV D YML L ++ +
Sbjct: 654 VPVTTTLLRESHESIQKLRLVLRFLLGVLHSYNEGITIEPEYVHLDKYMLHALYQYNKEI 713
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
LY + Y ++++NF+ N +S Y L+KDRLYCD + RL+ + +I VL
Sbjct: 714 QNLYENYLYHHVCKLIINFLTNTVSPVYCHLIKDRLYCDEVESPTRLAAMEVTCDILTVL 773
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSF-CHFKV 1031
R++AP++PHLAEEV+ + P + + FKV
Sbjct: 774 ARSIAPVVPHLAEEVWLYHPENLASIPLYHTEFKV 808
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/411 (51%), Positives = 284/411 (69%), Gaps = 14/411 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGF ELY+WQR+ L G P+F+LHDGPPYANG PH+GHA+NKILKDITLRS ++ G+RVH
Sbjct: 39 KCGFLELYNWQRKNLKG-PDFVLHDGPPYANGLPHMGHAINKILKDITLRSKIITGRRVH 97
Query: 61 YVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EH 119
YVPGWDCHGLPIE K + S K ++PL+IR+KA+ FA + I Q+ F SWG +ADW E
Sbjct: 98 YVPGWDCHGLPIEQKVL-SNTKNVNPLEIRRKARKFASDAIAKQREIFISWGTVADWNES 156
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
CY+T YV+NQL QF NLY + ++R KPVYWSPSSRTALAESELEY H SKS+
Sbjct: 157 GCYYTNHVSYVQNQLQQFINLYDKGLVFRAFKPVYWSPSSRTALAESELEYNESHKSKSV 216
Query: 180 YLKIKLNQVP-AHLLEGATD--LHALIWTTTPWSLPANQFIAFNPALEYSVA--SVKGAN 234
++++L+ + L+ + L+ALIWTTTPWSL ANQ IAF+ + Y + ++K
Sbjct: 217 IIRMQLDACTLSSKLKNLENKPLYALIWTTTPWSLIANQAIAFSSNIVYCIVEDNLKNLY 276
Query: 235 VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGT 294
++ +CL S++ ++++ GQ L + Y PI +E+ L LP V++S GT
Sbjct: 277 ILAQECLT-SIEQKL-GPLKLITTITGQELSEAKYFQPITRER--LPFLPGQHVTTSVGT 332
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
GLVH APAHG +DFL+A+ IPVL+LI + G + + G GL++L DG +++LH +
Sbjct: 333 GLVHTAPAHGPEDFLIAVENNIPVLSLIDDDGCFIRETGDEFAGLDVLTDGANKILHHIS 392
Query: 355 PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+VL T+ HSYPYDWRTKKPVI++AS QWFID IK A+ ++ NI
Sbjct: 393 ENVLHTDMITHSYPYDWRTKKPVIIRASHQWFIDINSIKEAAI--DSIANI 441
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 103/164 (62%), Gaps = 6/164 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVI 1165
L+LI + G + + G GL++L +G +++LH + +VL T+ HSYPYDWRTKKPVI
Sbjct: 357 LSLIDDDGCFIRETGDEFAGLDVLTDGANKILHHISENVLHTDMITHSYPYDWRTKKPVI 416
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPE----SAKKSLRDQIAQRPYWCISRQRVWGV 1221
++AS QWFID IK A+ + + PE S +L Q+ QRPYWCISRQR WG
Sbjct: 417 IRASHQWFIDINSIKEAAIDSIANIRIYPEQNYTSYLNALLAQVKQRPYWCISRQRSWGT 476
Query: 1222 PIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PIP+ Y+ T I + I+ C L++ +G D+WW L VE+L+
Sbjct: 477 PIPILYNKRTGDIYTSRKWIERLCKLMERYGTDYWWELSVEKLI 520
>gi|193636717|ref|XP_001949755.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
[Acyrthosiphon pisum]
Length = 943
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/621 (43%), Positives = 381/621 (61%), Gaps = 42/621 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL-----EGATDLHALIWTTTPWSLPANQ 472
+ALAE+ELEY P+H SKS+ +K++L P+ L + ++ALIWTTTPW+LP N
Sbjct: 217 SALAEAELEYNPNHQSKSVTVKLEL--CPSTLSIDLSNHNSEPIYALIWTTTPWTLPGNI 274
Query: 473 FIAFNPALEYSVASVKG--ANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
+ ++P L YS ++ ++A LV+NL + I+++ GQ+L + Y
Sbjct: 275 AVVYSPNLLYSFVKIQDTLGVYLLATELVDNLSAKIEKPIEIITTVKGQHLSGLKYKSLR 334
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
N E D + L V+ KGTGLVH APA+G +DFL+AL K+P+ + G + P
Sbjct: 335 NGES-DKQFLEGDHVTVDKGTGLVHTAPAYGHEDFLIALKHKVPIECHVDEHGIFMPQTW 393
Query: 591 PGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L GL +L G + V L+ +L TE Y+HSYPYDWRTK PVI++AS+QWF+DT IK
Sbjct: 394 SELVGLPVLDIGNETVCSLLSDKILHTEIYEHSYPYDWRTKLPVIVRASKQWFLDTAAIK 453
Query: 651 PEALACLEEVNFVPE--SAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD-GDTIIVNEA 707
+++ CL+++ PE ++ L I +RPYWCISRQR WGVPIPV YD D+ I++E
Sbjct: 454 SQSIECLKDIKIYPEIGGSRNALLTLIEKRPYWCISRQRSWGVPIPVLYDESDSTIIDEK 513
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN-SNVTKSNDILDIWFDSGISWSHVLKD- 765
+ + L+++ G DFWW V++L++ + N + K DILDIWFDSGISWS VL D
Sbjct: 514 LLDQYYALLEKTGQDFWWIHDVQKLVSNTPHNPEKLKKGLDILDIWFDSGISWSCVLGDN 573
Query: 766 KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISA 825
K A +Y+EG+DQ GWF +SL++S+AL++ +PF+++F+HGFVVD+ G KMSKS+GNVI
Sbjct: 574 KIADLYLEGVDQCTGWFQASLMSSIALRNVSPFKSLFVHGFVVDKNGRKMSKSIGNVIDP 633
Query: 826 HDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKN 885
DI G Y+KS+ G+DVLRWWVA H S +P+ K
Sbjct: 634 QDIVNG-----NYDKSID------------------GIDVLRWWVAKHGSHQTNIPVTKE 670
Query: 886 ILNSSQDDVQKIRSSLRYLLGVLHNHSEST----GSISRYVDVYMLKRLCEFQNTMDTLY 941
LN S+ V K+R +R+LLG L+N E+ + RY+D YM+ L F+N + LY
Sbjct: 671 TLNDSKQSVDKLRLIIRFLLGSLNNVKENNFMHGANHLRYLDKYMMLELISFENETNKLY 730
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
FQY + LL+F+ N++S Y +KDRLYCD I RL+ TL I LL+ +
Sbjct: 731 NTFQYNKVCAKLLHFITNQVSGLYVHHIKDRLYCDPIESNDRLACTATLQAILETLLKHI 790
Query: 1002 APIMPHLAEEVYSHLPSRQGT 1022
API+PHLAEE +S+ P R+ T
Sbjct: 791 APILPHLAEEAFSYYPLRRNT 811
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/419 (50%), Positives = 286/419 (68%), Gaps = 14/419 (3%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
CGFSELYSWQR+ +N + E+ILHDGPPYANG+ H+GHA+NKILKDIT+RS L+ GK++ Y
Sbjct: 56 CGFSELYSWQRQHVNNE-EYILHDGPPYANGSAHMGHAINKILKDITIRSKLVNGKKISY 114
Query: 62 VPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
+PGWDCHGLPIELKA +K K PL+IRK A+ +A + I QK F+SWG+LADWE
Sbjct: 115 IPGWDCHGLPIELKAEKIHGNKWKNFGPLEIRKSARKYASKEIEKQKTVFKSWGILADWE 174
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
+NCY+T+DK+YV+NQ+ QF+ LYK+ IYRDLKPVYWSPSS++ALAE+ELEY P+H SKS
Sbjct: 175 NNCYYTYDKKYVQNQIQQFFKLYKKGLIYRDLKPVYWSPSSKSALAEAELEYNPNHQSKS 234
Query: 179 IYLKIKLNQVPAHLL-----EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG- 232
+ +K++L P+ L + ++ALIWTTTPW+LP N + ++P L YS ++
Sbjct: 235 VTVKLEL--CPSTLSIDLSNHNSEPIYALIWTTTPWTLPGNIAVVYSPNLLYSFVKIQDT 292
Query: 233 -ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSS 291
++A LV++L + IE++ GQ+L + Y N E D + L V+
Sbjct: 293 LGVYLLATELVDNLSAKIEKPIEIITTVKGQHLSGLKYKSLRNGES-DKQFLEGDHVTVD 351
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH 351
KGTGLVH APA+G +DFL+AL K+P+ + G + P L GL +L G + V
Sbjct: 352 KGTGLVHTAPAYGHEDFLIALKHKVPIECHVDEHGIFMPQTWSELVGLPVLDIGNETVCS 411
Query: 352 LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
L+ +L TE Y+HSYPYDWRTK PVI++AS+QWF+DT IK +++ C I +G
Sbjct: 412 LLSDKILHTEIYEHSYPYDWRTKLPVIVRASKQWFLDTAAIKSQSIECLKDIKIYPEIG 470
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ G + P L GL +L G + V L+ +L TE Y+HSYPYDWRTK PVI++A
Sbjct: 382 VDEHGIFMPQTWSELVGLPVLDIGNETVCSLLSDKILHTEIYEHSYPYDWRTKLPVIVRA 441
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPE--SAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
S+QWF+DT IK +++ CL+ + PE ++ +L I +RPYWCISRQR WGVPIPV
Sbjct: 442 SKQWFLDTAAIKSQSIECLKDIKIYPEIGGSRNALLTLIEKRPYWCISRQRSWGVPIPVL 501
Query: 1227 YD-GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSNQGL 1279
YD D+ I++E + + L+++ G DFWW V++L+ S+ N K +GL
Sbjct: 502 YDESDSTIIDEKLLDQYYALLEKTGQDFWWIHDVQKLV--SNTPHNPEKLKKGL 553
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 1041 KRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGT 1093
K LYCD I RL+ TL I LL+ +API+PHLAEE +S+ P R+ T
Sbjct: 759 KDRLYCDPIESNDRLACTATLQAILETLLKHIAPILPHLAEEAFSYYPLRRNT 811
>gi|328793797|ref|XP_001122215.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Apis
mellifera]
Length = 964
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/626 (41%), Positives = 374/626 (59%), Gaps = 39/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAF 476
TALAESELEY H SK++ +++ L+ +P +L ++ALIWTTTPWSL ANQ I F
Sbjct: 230 TALAESELEYNQQHQSKAVIIRLYLDNIPVNLNSFKNHPIYALIWTTTPWSLVANQAITF 289
Query: 477 NPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+ Y + ++ I+A+ L+ ++ + +VC F G+ L++ TY+HP K +
Sbjct: 290 SANATYCLVENNSKDLYIIAQDLLNTIELKLGSLRTLVC-FKGKELENSTYLHPFTKHK- 347
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L A V+++ GTGLVH APAHG +DFL+AL KI +L+++ +G+Y+ +AG G
Sbjct: 348 -CPFLAANHVTTNLGTGLVHTAPAHGPEDFLVALENKIHILSIVDTEGRYTKEAGSQFCG 406
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
L +L +G D+V+ L+ D+L E HSYPYDWRTKKPV+++AS QWFID +K + +
Sbjct: 407 LQVLTEGVDKVIDLLNQDILHVETITHSYPYDWRTKKPVLIRASNQWFIDINSLKEKIID 466
Query: 656 CLEEVNFVPE----SAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
++ ++ P+ S L I RPYWCISRQR WG PIPV Y T NE +
Sbjct: 467 SIKNIDIYPKCNHTSFMNALLAGIKNRPYWCISRQRSWGTPIPVVYSKTTGKAFTNEEIV 526
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVL 763
+ C ID++GPD WW SV+ L+ + ++ K NDI+DIWFDSGISWS +L
Sbjct: 527 ERLCNSIDKYGPDCWWEYSVKDLIGLDMIEKLNIAADDIEKGNDIMDIWFDSGISWSMIL 586
Query: 764 KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+ A++Y+EG DQ +GWF SSL+TS+AL+ + +F+HGF VDE KMSKS+GNVI
Sbjct: 587 PNGKANLYLEGYDQFSGWFQSSLITSIALQECPSYSAIFVHGFAVDENCLKMSKSIGNVI 646
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ +I QG L +K P YGVDVLRWWVA H S+ +P+
Sbjct: 647 NPEEILQGGSNL--------------------EKNPIYGVDVLRWWVANHGSQHAQIPVS 686
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY--VDVYMLKRLCEFQNTMDTLY 941
KNI + + V K+R LR+LLG LH + + +Y +D YML L + + Y
Sbjct: 687 KNIFDGCKQSVYKLRLILRFLLGALHPYYKDINCKPQYRIIDKYMLYLLFCYNEQIQQHY 746
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
+ Y AS++++NF+ N +S+ Y TL+KDRLYCD R++ + + I +VL+R++
Sbjct: 747 NNYDYHHASKMIMNFITNNVSSLYCTLIKDRLYCDEATSSIRIAAVEVIKEILNVLIRSI 806
Query: 1002 APIMPHLAEEVYSHLPSRQGTFSSFC 1027
API+PHLAEE + H P C
Sbjct: 807 APILPHLAEEAWLHYPKNCAYIPLHC 832
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/408 (50%), Positives = 282/408 (69%), Gaps = 11/408 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELY WQ++ L+G P+FILHDGPPYANG PH+GHA+NKILKDITLR ++ RVH
Sbjct: 72 KCGFSELYDWQKKNLSG-PDFILHDGPPYANGIPHMGHAINKILKDITLRYKIMNQNRVH 130
Query: 61 YVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EH 119
YVPGWDCHGLPIELKA+ + + +PL+IRKKA+ +A E I QK F+SWGV ADW E
Sbjct: 131 YVPGWDCHGLPIELKAVHNNAE--NPLEIRKKARKYAEEAIIKQKEAFQSWGVTADWNES 188
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
Y T Y+KNQL QF LYK+ I+RD PVYWSPSSRTALAESELEY H SK++
Sbjct: 189 GYYFTSHSSYIKNQLRQFIKLYKKGIIFRDFMPVYWSPSSRTALAESELEYNQQHQSKAV 248
Query: 180 YLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IV 237
+++ L+ +P +L ++ALIWTTTPWSL ANQ I F+ Y + ++ I+
Sbjct: 249 IIRLYLDNIPVNLNSFKNHPIYALIWTTTPWSLVANQAITFSANATYCLVENNSKDLYII 308
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A+ L+ +++ + +VC F G+ L++ TY+HP K + L A V+++ GTGLV
Sbjct: 309 AQDLLNTIELKLGSLRTLVC-FKGKELENSTYLHPFTKHK--CPFLAANHVTTNLGTGLV 365
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL+AL KI +L+++ +G+Y+ +AG GL +L +G D+V+ L+ D+
Sbjct: 366 HTAPAHGPEDFLVALENKIHILSIVDTEGRYTKEAGSQFCGLQVLTEGVDKVIDLLNQDI 425
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
L E HSYPYDWRTKKPV+++AS QWFID +K + + ++ NI
Sbjct: 426 LHVETITHSYPYDWRTKKPVLIRASNQWFIDINSLKEK--IIDSIKNI 471
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 101/166 (60%), Gaps = 6/166 (3%)
Query: 1104 HHLNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
H L+++ +G+Y+ +AG GL +L EG D+V+ L+ D+L E HSYPYDWRTKKP
Sbjct: 385 HILSIVDTEGRYTKEAGSQFCGLQVLTEGVDKVIDLLNQDILHVETITHSYPYDWRTKKP 444
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQ----IAQRPYWCISRQRVW 1219
V+++AS QWFID +K + + ++ ++ P+ S + I RPYWCISRQR W
Sbjct: 445 VLIRASNQWFIDINSLKEKIIDSIKNIDIYPKCNHTSFMNALLAGIKNRPYWCISRQRSW 504
Query: 1220 GVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
G PIPV Y T NE ++ C ID++GPD WW V+ L+
Sbjct: 505 GTPIPVVYSKTTGKAFTNEEIVERLCNSIDKYGPDCWWEYSVKDLI 550
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
++ K LYCD R++ + + I +VL+R++API+PHLAEE + H P
Sbjct: 772 TLIKDRLYCDEATSSIRIAAVEVIKEILNVLIRSIAPILPHLAEEAWLHYPKNCAYIPLH 831
Query: 1098 C 1098
C
Sbjct: 832 C 832
>gi|383848376|ref|XP_003699827.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like [Megachile
rotundata]
Length = 956
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/632 (41%), Positives = 378/632 (59%), Gaps = 41/632 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAF 476
TALAESELEY +H SK++ ++++++ +P L ++ALIWTTTPW+L ANQ I+F
Sbjct: 221 TALAESELEYNKNHQSKTVIVRLRVSDLPKELNSFKDRTVYALIWTTTPWTLVANQAISF 280
Query: 477 NPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+ Y +A N+ I+A+ L+++++ + VV G+ L+ TY HP N+E+
Sbjct: 281 SKDATYCLAEDATGNLNIIAEKLLKDVESKIGA-LKVVACLEGKQLEGSTYFHPFNEEK- 338
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L L V++ GTGLVH APAHG DDFL+AL + + +L+ +G+Y+ AG G
Sbjct: 339 -LPFLAGKHVTTDVGTGLVHTAPAHGPDDFLVALENNMNITSLVDAEGRYTDTAGSKFSG 397
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
LN+L +G D+VL+++ DVL E HSYPYDWRTK+PVI++AS QWFID RI+ + +
Sbjct: 398 LNVLTEGSDKVLNILAQDVLHVEMLTHSYPYDWRTKQPVIIRASNQWFIDINRIRDKVID 457
Query: 656 CLEEVNFVPESAK----KTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
L+ + P + L + + RPYWCISRQR WG PIPV Y T + N+ +
Sbjct: 458 SLKSIEIYPTCNRSPVMNALLNAVKNRPYWCISRQRCWGTPIPVLYSKKTGKMYTNKELV 517
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTS-------DVNSNVTKSNDILDIWFDSGISWSHV 762
+ C ID++GPD+WW SVE L+ + DV+ +V K DI+DIWFDSGISWS V
Sbjct: 518 ESLCHSIDQYGPDYWWKYSVEDLVGSDVLRGLNIDVD-DVEKGKDIMDIWFDSGISWSAV 576
Query: 763 LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
L A +YMEG DQ NGWF SSL+TS+AL+ +P+ +++HGF VDE G KMSKSVGNV
Sbjct: 577 LPKGKADLYMEGHDQFNGWFQSSLITSIALQDHSPYSAIYVHGFAVDENGLKMSKSVGNV 636
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
++ D+ +G + K P YGVDVLRWWV H ++ VP+
Sbjct: 637 VNPEDLLRGG--------------------SNSAKNPVYGVDVLRWWVTNHGAQHSHVPV 676
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY--VDVYMLKRLCEFQNTMDTL 940
K +L SQ + K+R +R+LLG LH Y +D YML L + +
Sbjct: 677 SKELLEKSQYCINKLRLIVRFLLGALHYRCPDANLKPEYRTIDKYMLYLLYCYSKQVQQY 736
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y ++Y A R ++NF+ N++SA Y TL+KDRLYC+ + R+S + + I +VL+R+
Sbjct: 737 YDNYEYPTACRTIMNFISNDVSALYCTLIKDRLYCEEVTSPMRISVVKVMEAILNVLVRS 796
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVY 1032
+API+PHLAEE + + + H K Y
Sbjct: 797 IAPIVPHLAEETWLYYHGYDESVEPLHHTKPY 828
Score = 395 bits (1014), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/398 (48%), Positives = 271/398 (68%), Gaps = 8/398 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
GF +LY WQR L G E++LHDGPPYANG PH+GH +NKILKDITLR+ +L G RVHYV
Sbjct: 64 GFFDLYEWQRTNLKG-AEYVLHDGPPYANGVPHMGHTINKILKDITLRNKVLCGNRVHYV 122
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EHNC 121
PGWDCHGLP+ELK + + L PL IR+KA+ +A E Q F+SWG++ADW E C
Sbjct: 123 PGWDCHGLPVELKVV-KDNNLNDPLAIRQKAREYAKEVAMKQMQAFQSWGLMADWKESGC 181
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T Y+KN+L +F ++Y++ ++R PVYWSPS+RTALAESELEY +H SK++ +
Sbjct: 182 YFTNQPSYMKNELHRFLDMYEKGVVFRSFMPVYWSPSARTALAESELEYNKNHQSKTVIV 241
Query: 182 KIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IVAK 239
+++++ +P L ++ALIWTTTPW+L ANQ I+F+ Y +A N+ I+A+
Sbjct: 242 RLRVSDLPKELNSFKDRTVYALIWTTTPWTLVANQAISFSKDATYCLAEDATGNLNIIAE 301
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L++ ++ ++VV G+ L+ TY HP N+E+ L L V++ GTGLVH
Sbjct: 302 KLLKDVESKIGA-LKVVACLEGKQLEGSTYFHPFNEEK--LPFLAGKHVTTDVGTGLVHT 358
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
APAHG DDFL+AL + + +L+ +G+Y+ AG GLN+L +G D+VL+++ DVL
Sbjct: 359 APAHGPDDFLVALENNMNITSLVDAEGRYTDTAGSKFSGLNVLTEGSDKVLNILAQDVLH 418
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYPYDWRTK+PVI++AS QWFID RI+ + +
Sbjct: 419 VEMLTHSYPYDWRTKQPVIIRASNQWFIDINRIRDKVI 456
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 106/168 (63%), Gaps = 7/168 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+L+ +G+Y+ AG GLN+L EG D+VL+++ DVL E HSYPYDWRTK+PVI+
Sbjct: 379 SLVDAEGRYTDTAGSKFSGLNVLTEGSDKVLNILAQDVLHVEMLTHSYPYDWRTKQPVII 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAK----KSLRDQIAQRPYWCISRQRVWGVP 1222
+AS QWFID RI+ + + L+ + P + +L + + RPYWCISRQR WG P
Sbjct: 439 RASNQWFIDINRIRDKVIDSLKSIEIYPTCNRSPVMNALLNAVKNRPYWCISRQRCWGTP 498
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
IPV Y T + N+ ++ C ID++GPD+WW VE L+ SDV
Sbjct: 499 IPVLYSKKTGKMYTNKELVESLCHSIDQYGPDYWWKYSVEDLVG-SDV 545
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 1017 PSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIM 1076
P+ T +F V Y I R LYC+ + R+S + + I +VL+R++API+
Sbjct: 743 PTACRTIMNFISNDVSALYCTLIKDR-LYCEEVTSPMRISVVKVMEAILNVLVRSIAPIV 801
Query: 1077 PHLAEEVYSHLPSRQGTFSSFCHFKVYHHLN 1107
PHLAEE + + + H K Y L+
Sbjct: 802 PHLAEETWLYYHGYDESVEPLHHTKPYKVLD 832
>gi|187607938|ref|NP_001120515.1| isoleucyl-tRNA synthetase 2, mitochondrial [Xenopus (Silurana)
tropicalis]
gi|170285160|gb|AAI61415.1| LOC100145647 protein [Xenopus (Silurana) tropicalis]
Length = 992
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 269/633 (42%), Positives = 391/633 (61%), Gaps = 47/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY +HIS+SI+ K +++ P A +++G++ + L+WTT PW++PANQ I
Sbjct: 227 TALAEAELEYNQEHISRSIFAKFPMHKAPPKLASIIDGSSAVSTLVWTTQPWTIPANQAI 286
Query: 475 AFNPALEYSVASVK--GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P EY++A G I+A +E+ + T + V+ F G L+ +HP
Sbjct: 287 CYMPDTEYAIAKCANTGEQYILATDRIESTALSLGTQLQVISTFKGLDLEGGICLHPTIA 346
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ R LLPA V+ +KGTGLVH APAHG +D+ +A K+PV L+ G ++ AG
Sbjct: 347 D-RLSPLLPANHVTMAKGTGLVHTAPAHGIEDYSVASHHKLPVDCLVDESGHFTTGAGAE 405
Query: 593 LEGLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
LE +L DG + V+ ++ +L E++ HSYPYDWRTKKPVI++AS+QWF++T IK
Sbjct: 406 LENKAVLTDGNETVIQMLHASKSLLKEESFVHSYPYDWRTKKPVIIRASKQWFVNTANIK 465
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
+A L++V FVP SA + + + +R YWCISRQR WGVPIPVFY +T ++N +
Sbjct: 466 DKAQDVLKKVKFVPASAAARMLEMLDRRTYWCISRQRGWGVPIPVFYHKETGKPLINRHS 525
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL---------NTSDVNSNVTKSNDILDIWFDSGISW 759
+ H +L+++HG D WW+L +E+LL +SD + + D+LDIWFDSG SW
Sbjct: 526 VGHIMSLVEQHGTDVWWTLPLEELLPKAVLQKVEGSSDA-CDYEQGRDVLDIWFDSGTSW 584
Query: 760 SHVLKD--KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
+HVL+D + A VYMEG DQ+ GWF SSLLTSVA ++ AP+RN+ +HGF + EKG KMSK
Sbjct: 585 AHVLEDGEQRADVYMEGKDQLGGWFQSSLLTSVAARNKAPYRNIIVHGFTLSEKGEKMSK 644
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
SVGNV+ + G Q PAYG DVLRWWV A ++
Sbjct: 645 SVGNVVDPDVVINGG--------------------QDKVNEPAYGADVLRWWV-AESNVF 683
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS---ESTGSISRYV-DVYMLKRLCEF 933
V IG +LNS++DD+ K+R++LR++LG L + + +S S YV D YML L ++
Sbjct: 684 TEVLIGPAVLNSARDDINKLRNTLRFMLGNLSDFTPERDSVPSTEMYVIDQYMLHILQDY 743
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y +++ + R+L V +LS+FYF+++KDRLYCD R S L
Sbjct: 744 GSKVTDAYKGYEFGKVVRLLEALVTRDLSSFYFSIIKDRLYCDEEKDPKRRSCQTVLAEA 803
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
V++R+ API+PHLAEEV+ +LP R+ + S+F
Sbjct: 804 LDVVVRSFAPILPHLAEEVFQYLPYRKESDSAF 836
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 276/406 (67%), Gaps = 13/406 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
E GF +LY+WQRE K EF LHDGPPYANG PH+GHA+NKILKDIT R ++++G +V
Sbjct: 66 ESGFLQLYAWQRER-KTKKEFSLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVS 124
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
YVPGWDCHGLPIELKA+ + + +SP +IR+KAK FA + I QK+ F WG++ADW
Sbjct: 125 YVPGWDCHGLPIELKALAELGEEAENMSPTEIRRKAKMFAEKAIEKQKSSFIRWGIMADW 184
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+ CY+TFD +Y QL FY +Y + +IY+D KPV+WSPS+RTALAE+ELEY +H+S+
Sbjct: 185 D-KCYYTFDPKYEAKQLDIFYKMYDKGHIYQDYKPVFWSPSTRTALAEAELEYNQEHISR 243
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK--G 232
SI+ K +++ P A +++G++ + L+WTT PW++PANQ I + P EY++A G
Sbjct: 244 SIFAKFPMHKAPPKLASIIDGSSAVSTLVWTTQPWTIPANQAICYMPDTEYAIAKCANTG 303
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A +ES + T ++V+ F G L+ +HP + R LLPA V+ +K
Sbjct: 304 EQYILATDRIESTALSLGTQLQVISTFKGLDLEGGICLHPTIAD-RLSPLLPANHVTMAK 362
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A K+PV L+ G ++ AG LE +L DG + V+ +
Sbjct: 363 GTGLVHTAPAHGIEDYSVASHHKLPVDCLVDESGHFTTGAGAELENKAVLTDGNETVIQM 422
Query: 353 V--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ +L E++ HSYPYDWRTKKPVI++AS+QWF++T IK +A
Sbjct: 423 LHASKSLLKEESFVHSYPYDWRTKKPVIIRASKQWFVNTANIKDKA 468
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AG LE +L +G + V+ ++ +L E++ HSYPYDWRTKKPVI
Sbjct: 391 LVDESGHFTTGAGAELENKAVLTDGNETVIQMLHASKSLLKEESFVHSYPYDWRTKKPVI 450
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++T IK +A L+ V FVP SA + + + +R YWCISRQR WGVPIPV
Sbjct: 451 IRASKQWFVNTANIKDKAQDVLKKVKFVPASAAARMLEMLDRRTYWCISRQRGWGVPIPV 510
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY +T ++N ++ H +L+++HG D WW+LP+E+LL
Sbjct: 511 FYHKETGKPLINRHSVGHIMSLVEQHGTDVWWTLPLEELL 550
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
SI K LYCD R S L V++R+ API+PHLAEEV+ +LP R+ + S+F
Sbjct: 777 SIIKDRLYCDEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQYLPYRKESDSAF 836
>gi|194751239|ref|XP_001957934.1| GF23767 [Drosophila ananassae]
gi|190625216|gb|EDV40740.1| GF23767 [Drosophila ananassae]
Length = 941
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/628 (42%), Positives = 383/628 (60%), Gaps = 55/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY P HIS S+Y++ +N L E T L+AL+WTTTPW+LP+NQ I +N
Sbjct: 217 TALAEAELEYDPKHISPSVYVRFPINPNGLDLKEKDTRLYALVWTTTPWTLPSNQAICYN 276
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY++ + + ++A L+ + + + +VV G L D+TY H I+KE
Sbjct: 277 SSLEYALVRLSEHDQDELYLIASALLADFEENTKITCEVVQTLKGSSLGDLTYNHLIDKE 336
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q DL A V SKGTGLVH APAHG DDFL++LA KIPV L+ +G Y+ DA L
Sbjct: 337 QGDLPFYDASHVQDSKGTGLVHTAPAHGPDDFLVSLARKIPVKCLVNEEGVYTNDAPSFL 396
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + +V+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 397 VGKSVLKQGNPLVLEHITNNVVHSSTLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSSA 456
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
LE+V P E++KK L Q+ +RPYWCISRQR WGVPIPV Y T +++N
Sbjct: 457 ADALEKVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPIPVLYCRTTGKVVLNAD 516
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWS 760
I+HFC + + G DFWW+ S+E+LL T +N ++ K +DILDIWFDSG +WS
Sbjct: 517 LIQHFCRELRKEGSMDFWWAKSLEELLPTEILNKLGYKVVDLVKGSDILDIWFDSGSTWS 576
Query: 761 HVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL KDK A +Y+EG DQ GWF SSLL S+A + AP++ +F+HGF VDEKG KMSKS+
Sbjct: 577 AVLNKDKVADLYLEGYDQFTGWFQSSLLMSIAARDCAPYKALFVHGFTVDEKGYKMSKSL 636
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVIS IT+ YG DVLRWWVA+H ++ +
Sbjct: 637 GNVISPKQITK-----------------------------KYGTDVLRWWVASHGTQHMS 667
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI--SRYVDVYMLKRLCEFQNTM 937
+ + + +L + +++ K+R++LRYL G + ++ +I S +++ Y+L +L +F +
Sbjct: 668 ITVSEKLLQQAAENLSKVRATLRYLNGAIGERRQNQENIQDSSFLNRYLLSQLVDFDAEI 727
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEAR--LSGLHTLHNIFH 995
LY ++Y R + NF+ N++SA Y L+KDRLYC G+ R L+ TL + +
Sbjct: 728 TKLYNAYEYNRVVASIQNFLANQVSAVYVHLIKDRLYC----GDERELLAIRQTLTHCYE 783
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L +++ PI+P + EE +S+ F
Sbjct: 784 ELCKSLWPIVPFMVEESWSYYDPTGAAF 811
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/396 (53%), Positives = 275/396 (69%), Gaps = 8/396 (2%)
Query: 8 YSWQREAL--NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
Y +Q+E L KP F+LHDGPPYANG H+GHAVNKILKDITLR + G++V+YVPGW
Sbjct: 62 YQYQQEQLGEKDKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQQVNYVPGW 121
Query: 66 DCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN-CYHT 124
DCHGLPIELKA TS + L+IR+K+++FALE I +QK EF SWGVLA+W+ N Y T
Sbjct: 122 DCHGLPIELKA-TSAAAGQNALEIRQKSRSFALEAIESQKKEFSSWGVLANWQKNDIYMT 180
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
F E+++NQL FY LY++ +YRDLKPVYWSPSSRTALAE+ELEY P H+S S+Y++
Sbjct: 181 FQPEFIENQLNLFYKLYEKGLVYRDLKPVYWSPSSRTALAEAELEYDPKHISPSVYVRFP 240
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKC 240
+N L E T L+AL+WTTTPW+LP+NQ I +N +LEY++ + + ++A
Sbjct: 241 INPNGLDLKEKDTRLYALVWTTTPWTLPSNQAICYNSSLEYALVRLSEHDQDELYLIASA 300
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L+ + + EVV G L D+TY H I+KEQ DL A V SKGTGLVH A
Sbjct: 301 LLADFEENTKITCEVVQTLKGSSLGDLTYNHLIDKEQGDLPFYDASHVQDSKGTGLVHTA 360
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
PAHG DDFL++LA KIPV L+ +G Y+ DA L G ++L G VL + +V+ +
Sbjct: 361 PAHGPDDFLVSLARKIPVKCLVNEEGVYTNDAPSFLVGKSVLKQGNPLVLEHITNNVVHS 420
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 421 STLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSSA 456
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
L+ +G Y+ DA L G ++L +G VL + +V+ + +HSYP DWRTKKPVI++
Sbjct: 381 LVNEEGVYTNDAPSFLVGKSVLKQGNPLVLEHITNNVVHSSTLEHSYPIDWRTKKPVIIR 440
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A LE V P E++KK+L Q+ +RPYWCISRQR WGVPI
Sbjct: 441 ASEQWFINTEKLKSSAADALEKVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPI 500
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLLNTSDVN 1269
PV Y T +++N I+HFC + + G DFWW+ +E+LL T +N
Sbjct: 501 PVLYCRTTGKVVLNADLIQHFCRELRKEGSMDFWWAKSLEELLPTEILN 549
>gi|444732259|gb|ELW72563.1| Isoleucyl-tRNA synthetase, mitochondrial [Tupaia chinensis]
Length = 1013
Score = 498 bits (1281), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/623 (43%), Positives = 384/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L++ P A L++G++ + L+WTT PW++PANQ +
Sbjct: 252 TALAEAELEYNPEHVSRSIYVKFPLSKPPPKLASLIDGSSPVSFLVWTTQPWTIPANQAV 311
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y++ S G I+A V ++ T T +V+ F G L++ T HP+
Sbjct: 312 CYMPESKYAIVKCSSSGDFYILAADKVASIASTLGTTFEVISTFSGVDLENATCSHPLVP 371
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +PV L+ G ++ AGP
Sbjct: 372 DKVS-PLLPANHVTMTKGTGLVHTAPAHGMEDYAVASQHSLPVDCLVNEAGIFTDVAGPE 430
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ ++L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 431 LQNKSVLEEGTDVVIKMLQTAKNLLKEERLVHSYPYDWRTKKPVVIRASKQWFINITDIK 490
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + D + +RPYWCISRQRVWGVP+PVF D ++N
Sbjct: 491 TTAKELLKKVKFIPGSALNAMVDTLDRRPYWCISRQRVWGVPVPVFLHKTKDEHLINSQT 550
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL S+V S V DILDIW+DSG SWS
Sbjct: 551 IEHIIKLVEQHGSDIWWTLPPEQLL-PSEVLSQVGGPDALEYVPGQDILDIWYDSGTSWS 609
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + APF+ V +HGF + EKG KMSKS
Sbjct: 610 YVLPGSDQRADLYLEGKDQLGGWFQSSLLTSVAARGKAPFKTVVVHGFTLGEKGEKMSKS 669
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI+ + G K K P YG D LRWWV A ++
Sbjct: 670 LGNVINPDVVINGGKD--------------------QSKEPPYGADTLRWWV-AESNVFT 708
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQ 934
V IG ++L++++DD+ K+R++LR+LLG + + T SI + YV D YML L +
Sbjct: 709 EVTIGPSVLSAARDDISKLRNTLRFLLGNVAGFNPETDSIPVKNMYVIDQYMLHLLQDLA 768
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + Y ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 769 NKITDAYRQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALAEIL 828
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
VL+R+ API+PHLAEEV+ H+P
Sbjct: 829 DVLVRSFAPILPHLAEEVFQHIP 851
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 289/430 (67%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 91 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMKGSKIH 149
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IR+KA+ FA I QK+ F WG++ADW
Sbjct: 150 FVPGWDCHGLPIEIKVLSELGGKAQNLSAVEIREKARAFAKAAIEKQKSAFIRWGIMADW 209
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD++Y QL FY +Y++ +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 210 -NNCYYTFDRKYEAKQLRIFYQMYEKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 268
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L++ P A L++G++ + L+WTT PW++PANQ + + P +Y++ S G
Sbjct: 269 SIYVKFPLSKPPPKLASLIDGSSPVSFLVWTTQPWTIPANQAVCYMPESKYAIVKCSSSG 328
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V S+ T T EV+ F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 329 DFYILAADKVASIASTLGTTFEVISTFSGVDLENATCSHPLVPDKVS-PLLPANHVTMTK 387
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +PV L+ G ++ AGP L+ ++L +G D V+ +
Sbjct: 388 GTGLVHTAPAHGMEDYAVASQHSLPVDCLVNEAGIFTDVAGPELQNKSVLEEGTDVVIKM 447
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK T +L +V
Sbjct: 448 LQTAKNLLKEERLVHSYPYDWRTKKPVVIRASKQWFINITDIK------TTAKELLKKVK 501
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 502 FI---PGSAL 508
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 112/169 (66%), Gaps = 5/169 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ ++L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 416 LVNEAGIFTDVAGPELQNKSVLEEGTDVVIKMLQTAKNLLKEERLVHSYPYDWRTKKPVV 475
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA ++ D + +RPYWCISRQRVWGVP+PV
Sbjct: 476 IRASKQWFINITDIKTTAKELLKKVKFIPGSALNAMVDTLDRRPYWCISRQRVWGVPVPV 535
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNV 1272
F D ++N I+H L+++HG D WW+LP EQLL S+V S V
Sbjct: 536 FLHKTKDEHLINSQTIEHIIKLVEQHGSDIWWTLPPEQLL-PSEVLSQV 583
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I VL+R+ API+PHLAEEV+ H+P
Sbjct: 801 SIIKDRLYCEKENDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQHIP 851
>gi|321456139|gb|EFX67254.1| hypothetical protein DAPPUDRAFT_189542 [Daphnia pulex]
Length = 965
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/626 (42%), Positives = 374/626 (59%), Gaps = 47/626 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ-VPAHLLEGATD--LHALIWTTTPWSLPANQFI 474
TALAESELEY +H S SIYLKI L +P + + + + ++ ++WTTTPW++PANQ +
Sbjct: 206 TALAESELEYNVNHFSSSIYLKITLQTPLPECIADSSKEAPVYLVVWTTTPWTIPANQAV 265
Query: 475 AFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
+NP +Y + K +++A L +L+ + ++ +F G Y HP
Sbjct: 266 CYNPDKKYCLVRCKSHKDSKYLVIALELYHSLEQLWSCHFTLIKEFDGDIFNGHYYSHPF 325
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
K + + LLP VS KGTG VH APAHG DDFL+AL K+P+LNL+ GKYS DAG
Sbjct: 326 RKNE-SMPLLPGNHVSVKKGTGFVHTAPAHGPDDFLVALQHKMPILNLVDEDGKYSADAG 384
Query: 591 PGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L G ++L G+D VL L++ DV++ EN+ HSYPYDWRTK PVIL+AS QWFIDT+++K
Sbjct: 385 SDLCGNDVLDKGQDIVLKLLQNDVIFKENFTHSYPYDWRTKLPVILRASLQWFIDTDKLK 444
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG----DTIIVNE 706
+++ +++V+ VPE+ +K + Q+A RPYWCISRQR WGVPIPVFY I++
Sbjct: 445 TKSIEAMKDVSVVPENFEKPMLTQLATRPYWCISRQRSWGVPIPVFYRSLSHTKEAILHR 504
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN------SNVTKSNDILDIWFDSGISWS 760
++ C + E G D WW +S E L+ + + K DI+DIWFDSG+SW+
Sbjct: 505 DIVEKVCKITLEKGIDQWWRMSPEDLIGEELIKKLDLIPGQIFKGMDIMDIWFDSGVSWN 564
Query: 761 HVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL + K A Y+EG+DQ GWF SSLLTSVA AP++N+F+HGFV+D +G KMSKS+
Sbjct: 565 SVLPQGKQADFYLEGIDQFGGWFQSSLLTSVASSGHAPYKNIFVHGFVLDHEGRKMSKSL 624
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD-P 878
GNVI H I G KK PA G+D LRWWVA+H S +
Sbjct: 625 GNVIDPHLILDG----------------------DGKKQPAVGIDALRWWVASHVSANGG 662
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLH-----NHSESTGSISRYVDVYMLKRLCEF 933
+ +G + + + +D+QK+RS LR+LLG L+ + + + D YML L EF
Sbjct: 663 NISVGIHSIQQASEDIQKMRSVLRFLLGNLNAVTCSQFKQFSPTTLGLTDQYMLHLLSEF 722
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y E + + + ++ F+ +SAFY ++VK RLYC S+ E RLS L L I
Sbjct: 723 AENALSAYQEMNFRKVTSLVSAFINTSVSAFYCSIVKHRLYCHSLTSEDRLSALFVLSEI 782
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSR 1019
+ +API+PHL EE+ H P R
Sbjct: 783 LDQITLIIAPILPHLTEEIEMHHPWR 808
Score = 428 bits (1100), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/403 (52%), Positives = 275/403 (68%), Gaps = 9/403 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
F +LY WQR L + EFILHDGPPYANG PH+GHA+NKILKDI R LL GK VH+V
Sbjct: 47 SFDQLYKWQRTNLQNEDEFILHDGPPYANGKPHMGHALNKILKDILSRYKLLSGKLVHFV 106
Query: 63 PGWDCHGLPIELKAITSKDKLLS-PLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
PGWDCHGLPIELKA+ + D L S L+IR++AK FAL+TI QK F WGV+ADW+ C
Sbjct: 107 PGWDCHGLPIELKALETHDVLNSNSLEIRQRAKLFALDTIKCQKEAFSRWGVMADWDSGC 166
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF YV +QL F +LY + +YRD KPVYWSPSSRTALAESELEY +H S SIYL
Sbjct: 167 YFTFTPSYVTSQLKIFCDLYDKGLVYRDYKPVYWSPSSRTALAESELEYNVNHFSSSIYL 226
Query: 182 KIKLNQ-VPAHLLEGATD--LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---- 234
KI L +P + + + + ++ ++WTTTPW++PANQ + +NP +Y + K
Sbjct: 227 KITLQTPLPECIADSSKEAPVYLVVWTTTPWTIPANQAVCYNPDKKYCLVRCKSHKDSKY 286
Query: 235 VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGT 294
+++A L SL+ + ++ +F G Y HP K + + LLP VS KGT
Sbjct: 287 LVIALELYHSLEQLWSCHFTLIKEFDGDIFNGHYYSHPFRKNE-SMPLLPGNHVSVKKGT 345
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
G VH APAHG DDFL+AL K+P+LNL+ GKYS DAG L G ++L G+D VL L++
Sbjct: 346 GFVHTAPAHGPDDFLVALQHKMPILNLVDEDGKYSADAGSDLCGNDVLDKGQDIVLKLLQ 405
Query: 355 PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
DV++ EN+ HSYPYDWRTK PVIL+AS QWFIDT+++K +++
Sbjct: 406 NDVIFKENFTHSYPYDWRTKLPVILRASLQWFIDTDKLKTKSI 448
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 111/162 (68%), Gaps = 4/162 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVI 1165
LNL+ GKYS DAG L G ++L +G+D VL L++ DV++ EN+ HSYPYDWRTK PVI
Sbjct: 370 LNLVDEDGKYSADAGSDLCGNDVLDKGQDIVLKLLQNDVIFKENFTHSYPYDWRTKLPVI 429
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
L+AS QWFIDT+++K +++ ++ V+ VPE+ +K + Q+A RPYWCISRQR WGVPIPV
Sbjct: 430 LRASLQWFIDTDKLKTKSIEAMKDVSVVPENFEKPMLTQLATRPYWCISRQRSWGVPIPV 489
Query: 1226 FYDG----DTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY I++ ++ C + E G D WW + E L+
Sbjct: 490 FYRSLSHTKEAILHRDIVEKVCKITLEKGIDQWWRMSPEDLI 531
>gi|195442760|ref|XP_002069114.1| GK24181 [Drosophila willistoni]
gi|194165199|gb|EDW80100.1| GK24181 [Drosophila willistoni]
Length = 938
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/629 (43%), Positives = 377/629 (59%), Gaps = 57/629 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY HIS S+YL+ KLN H G ++AL+WTTTPW+LP+NQ I FN
Sbjct: 220 TALAEAELEYDAKHISPSVYLRFKLN---PH--AGFKSIYALVWTTTPWTLPSNQAICFN 274
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + + N ++A LV + K Q + ++V F G L ++Y HPI+ E
Sbjct: 275 SSLEYVLIKLPDRNPNDLYLIAAALVTDFKAATQLECEIVHKFDGSLLNQLSYHHPIDIE 334
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q L A V +KGTGLVH APAHG DDFL+ L++KIPV + G Y+ +A L
Sbjct: 335 QTQLPFFDAKHVQDNKGTGLVHTAPAHGPDDFLICLSKKIPVKCFVDESGIYTKEAPDFL 394
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++LG G VL + DV+ +HSYP DWRTK+PVI++AS+QWFI+TE++K A
Sbjct: 395 VGQSVLGQGNSLVLRHIAKDVVQATQLEHSYPIDWRTKEPVIVRASEQWFINTEKLKGPA 454
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
A L++V P E++KK L +Q+ +RPYWCISRQR WGVPIPV Y DT +IVN A
Sbjct: 455 AAALDQVEVYPRVNAEASKKALLNQLQKRPYWCISRQRAWGVPIPVLYRRDTGKVIVNRA 514
Query: 708 NIKHFCT-LIDEHGPDFWWSLSVEQLLNTS----DVNSN---VTKSNDILDIWFDSGISW 759
I H C LI+E DFWWS +++ L T+ D+N + + K DI DIWFDSG +W
Sbjct: 515 LIDHLCARLINEGNMDFWWSKTLDDKLLTAEIVKDLNCDIDLIVKGKDIFDIWFDSGSTW 574
Query: 760 SHVLK-DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
S VL+ + A +Y+EG DQ GWF SSLLTS+A ++TAP++ +F+HGF VDEKG KMSKS
Sbjct: 575 SAVLQGGQVADLYLEGYDQFTGWFQSSLLTSIAARNTAPYKALFVHGFTVDEKGHKMSKS 634
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVIS IT+ YG DVLRWWVA+H +++
Sbjct: 635 LGNVISPKQITK-----------------------------KYGTDVLRWWVASHGTQNM 665
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG--SISRYVDVYMLKRLCEFQNT 936
++ + +L S D++ KIR LRYL GV+ + T + Y++ Y+L + +F
Sbjct: 666 SITVSDKLLQQSADNLSKIRGILRYLNGVIGEKQKLTSHQNDESYLNKYLLSNILDFDAE 725
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
++ LY ++Y R + NF+ N++SA Y L+KDRLYC A + TL + +
Sbjct: 726 IENLYNNYEYNRVVASIQNFIANQVSAIYVHLIKDRLYCGHSQELAAIR--QTLTHCYRH 783
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTFSS 1025
L +T+ PI+P L EE + H + F +
Sbjct: 784 LCKTLWPIVPFLVEESWRHYDPKSDGFHT 812
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/396 (51%), Positives = 269/396 (67%), Gaps = 12/396 (3%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y +R + KP F+LHDGPPYANG H+GHAVNKILKDITLR + G++V+Y+PGWDC
Sbjct: 64 YQERRHLADEKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQKVNYIPGWDC 123
Query: 68 HGLPIELKAITSKDK--LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN-CYHT 124
HGLPIELKA + D+ PLDIR+K++ FALE + +QK EF SWG+LA+W+ + Y T
Sbjct: 124 HGLPIELKATNATDRGSHTDPLDIRQKSRKFALEAVQSQKDEFRSWGILANWQRDQIYMT 183
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
F E++ NQL FY+LY++ +YRDLKPVYWSPSSRTALAE+ELEY H+S S+YL+ K
Sbjct: 184 FQPEFIANQLKMFYDLYERGLVYRDLKPVYWSPSSRTALAEAELEYDAKHISPSVYLRFK 243
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKC 240
LN H G ++AL+WTTTPW+LP+NQ I FN +LEY + + N ++A
Sbjct: 244 LN---PH--AGFKSIYALVWTTTPWTLPSNQAICFNSSLEYVLIKLPDRNPNDLYLIAAA 298
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
LV K Q + E+V F G L ++Y HPI+ EQ L A V +KGTGLVH A
Sbjct: 299 LVTDFKAATQLECEIVHKFDGSLLNQLSYHHPIDIEQTQLPFFDAKHVQDNKGTGLVHTA 358
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
PAHG DDFL+ L++KIPV + G Y+ +A L G ++LG G VL + DV+
Sbjct: 359 PAHGPDDFLICLSKKIPVKCFVDESGIYTKEAPDFLVGQSVLGQGNSLVLRHIAKDVVQA 418
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+HSYP DWRTK+PVI++AS+QWFI+TE++K A
Sbjct: 419 TQLEHSYPIDWRTKEPVIVRASEQWFINTEKLKGPA 454
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 110/168 (65%), Gaps = 7/168 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ G Y+ +A L G ++LG+G VL + DV+ +HSYP DWRTK+PVI++
Sbjct: 379 FVDESGIYTKEAPDFLVGQSVLGQGNSLVLRHIAKDVVQATQLEHSYPIDWRTKEPVIVR 438
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A A L+ V P E++KK+L +Q+ +RPYWCISRQR WGVPI
Sbjct: 439 ASEQWFINTEKLKGPAAAALDQVEVYPRVNAEASKKALLNQLQKRPYWCISRQRAWGVPI 498
Query: 1224 PVFYDGDT--IIVNEANIKHFCT-LIDEHGPDFWWSLPVEQLLNTSDV 1268
PV Y DT +IVN A I H C LI+E DFWWS ++ L T+++
Sbjct: 499 PVLYRRDTGKVIVNRALIDHLCARLINEGNMDFWWSKTLDDKLLTAEI 546
>gi|403277474|ref|XP_003930385.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 1012
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/623 (43%), Positives = 382/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + LIWTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSFLIWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + F G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTFSGVELENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINISDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + D + +RPYWCISRQR WGVPIPVF+ D ++N
Sbjct: 490 TTAKELLKKVKFIPGSALNAMVDMMDRRPYWCISRQRTWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSGISWS
Sbjct: 550 IEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGISWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKKAPYKTVVVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI+ + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVINPDVVINGG--------------------QDQSKEPPYGADVLRWWV-AESNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLQTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVIVRSFAPILPHLAEEVFQHIP 850
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 283/430 (65%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMTGSKIH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEVKVLSELGGEAQNLSAIEIREKARSFAKAAIEKQKLAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY TFD +Y QL FY +Y++ +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYFTFDGKYEAKQLRTFYQMYEKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + LIWTT PW++PANQ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSFLIWTTQPWTIPANQAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVASVASTLETTFETISTFSGVELENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK T +L +V
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINISDIK------TTAKELLKKVK 500
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 501 FI---PGSAL 507
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA ++ D + +RPYWCISRQR WGVPIPV
Sbjct: 475 IRASKQWFINISDIKTTAKELLKKVKFIPGSALNAMVDMMDRRPYWCISRQRTWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDIWWTLPPEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 850
>gi|380029360|ref|XP_003698343.1| PREDICTED: LOW QUALITY PROTEIN: isoleucine--tRNA ligase,
mitochondrial-like [Apis florea]
Length = 963
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/623 (40%), Positives = 372/623 (59%), Gaps = 39/623 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAF 476
TALAESELEY H SK++ +++ ++ +P +L ++ALIWTTTPWSL ANQ I F
Sbjct: 230 TALAESELEYNQQHQSKAVIIRLHIDNIPVNLNSFKNHAIYALIWTTTPWSLVANQAITF 289
Query: 477 NPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+ Y + ++ I+A+ L+ ++ + +VC F G+ L+ TY HP K +
Sbjct: 290 SANATYCLVENNSRDLYIIAQDLLSTVELKVGSLRTLVC-FKGRELEGSTYFHPFTKHK- 347
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L A V+++ GTGLVH APAHG +DFL+AL KI +L+++ +G+Y+ +AG G
Sbjct: 348 -CPFLAANHVTTNLGTGLVHTAPAHGPEDFLVALENKIHILSIVDTEGRYTKEAGSQFCG 406
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
L +L +G D+V+ L+ D+L E HSYPYDWRTKKPV+++AS QWFID IK + +
Sbjct: 407 LQVLTEGVDKVIDLLSQDILHVETLTHSYPYDWRTKKPVLIRASNQWFIDINSIKEKIID 466
Query: 656 CLEEVNFVPESAKKTLRDQ----IAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
+ +++ P+ + + + I RPYWCISRQR WG PIPV Y T NE +
Sbjct: 467 SIADIDIYPKCNRTSFMNALLAGIKNRPYWCISRQRFWGTPIPVVYSKTTGKAFTNEEIV 526
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVL 763
+ C ID++GPD WW S++ L+ + +V K NDI+DIWFDSGISWS ++
Sbjct: 527 ERLCNSIDKYGPDCWWEYSIKDLIGLDIIEKLNIATDDVEKGNDIMDIWFDSGISWSMII 586
Query: 764 KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+ A++Y+EG DQ +GWF SSL+TS+AL+ + +F+HGF VDE KMSKS+GNVI
Sbjct: 587 PNGKANLYLEGYDQFSGWFQSSLITSIALQEYPSYSAIFVHGFAVDENFLKMSKSIGNVI 646
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ +I QG L +K P YGVDVLRWWVA H S+ +P+
Sbjct: 647 NPEEILQGGSNL--------------------EKNPIYGVDVLRWWVANHGSQHAQIPVS 686
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY--VDVYMLKRLCEFQNTMDTLY 941
K+I + + V K+R LR+LLG LH + E +Y +D YML L + + Y
Sbjct: 687 KSIFDGCKQSVYKLRLILRFLLGALHPYHEDINCKPQYRIIDKYMLYLLFCYNEQIQQHY 746
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
+ Y AS++++NF+ N +S Y TL+KDRLYCD R++ + + I +V +R++
Sbjct: 747 NNYDYHHASKMIMNFITNNVSGLYCTLIKDRLYCDEATSSIRIAAVQVIXRILNVFIRSI 806
Query: 1002 APIMPHLAEEVYSHLPSRQGTFS 1024
API+PHLAEE + + P ++
Sbjct: 807 APILPHLAEEAWLYYPKNCSIYT 829
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/398 (51%), Positives = 274/398 (68%), Gaps = 9/398 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFS+LY WQ++ L+G P+FILHDGPPYANG PH+GHA+NKILKDITLR ++ RVH
Sbjct: 72 KCGFSDLYDWQKKNLSG-PDFILHDGPPYANGIPHMGHAINKILKDITLRYKIINQNRVH 130
Query: 61 YVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EH 119
YVPGWDCHGLPIELKA+ ++ + L+IRKKA+ +A + I QK F+SWGV ADW E
Sbjct: 131 YVPGWDCHGLPIELKAV--RNNAQNSLEIRKKARKYAEQAIIKQKEAFQSWGVTADWNES 188
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
Y T Y+KNQL QF LYK+ I+RD PVYWSPSSRTALAESELEY H SK++
Sbjct: 189 GYYFTSQSSYIKNQLRQFIKLYKKGIIFRDFMPVYWSPSSRTALAESELEYNQQHQSKAV 248
Query: 180 YLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IV 237
+++ ++ +P +L ++ALIWTTTPWSL ANQ I F+ Y + ++ I+
Sbjct: 249 IIRLHIDNIPVNLNSFKNHAIYALIWTTTPWSLVANQAITFSANATYCLVENNSRDLYII 308
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A+ L+ +++ + +VC F G+ L+ TY HP K + L A V+++ GTGLV
Sbjct: 309 AQDLLSTVELKVGSLRTLVC-FKGRELEGSTYFHPFTKHK--CPFLAANHVTTNLGTGLV 365
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL+AL KI +L+++ +G+Y+ +AG GL +L +G D+V+ L+ D+
Sbjct: 366 HTAPAHGPEDFLVALENKIHILSIVDTEGRYTKEAGSQFCGLQVLTEGVDKVIDLLSQDI 425
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 395
L E HSYPYDWRTKKPV+++AS QWFID IK +
Sbjct: 426 LHVETLTHSYPYDWRTKKPVLIRASNQWFIDINSIKEK 463
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 101/166 (60%), Gaps = 6/166 (3%)
Query: 1104 HHLNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
H L+++ +G+Y+ +AG GL +L EG D+V+ L+ D+L E HSYPYDWRTKKP
Sbjct: 385 HILSIVDTEGRYTKEAGSQFCGLQVLTEGVDKVIDLLSQDILHVETLTHSYPYDWRTKKP 444
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQ----IAQRPYWCISRQRVW 1219
V+++AS QWFID IK + + + ++ P+ + S + I RPYWCISRQR W
Sbjct: 445 VLIRASNQWFIDINSIKEKIIDSIADIDIYPKCNRTSFMNALLAGIKNRPYWCISRQRFW 504
Query: 1220 GVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
G PIPV Y T NE ++ C ID++GPD WW ++ L+
Sbjct: 505 GTPIPVVYSKTTGKAFTNEEIVERLCNSIDKYGPDCWWEYSIKDLI 550
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFS 1095
++ K LYCD R++ + + I +V +R++API+PHLAEE + + P ++
Sbjct: 772 TLIKDRLYCDEATSSIRIAAVQVIXRILNVFIRSIAPILPHLAEEAWLYYPKNCSIYT 829
>gi|239916022|gb|ACS34699.1| MIP10137p [Drosophila melanogaster]
Length = 946
Score = 494 bits (1273), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/628 (41%), Positives = 376/628 (59%), Gaps = 55/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +HIS S+Y++ LN P+ ++AL+WTTTPW+LP+NQ I +N
Sbjct: 222 TALAEAELEYDANHISPSVYVRFALN--PSSFDVKDKQIYALVWTTTPWTLPSNQAICYN 279
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + + N ++A L+ + + Q ++V G+ L ++Y HPI+KE
Sbjct: 280 ASLEYVIVRLSDRNQDELYLMASALMADFEANTQLKCEIVQHLSGELLSKLSYNHPIDKE 339
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q +L A V SKGTGLVH APAHG +DFL++L +KIPV + +G Y+ +A L
Sbjct: 340 QSNLPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTKEAPDFL 399
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 400 RGKSVLDQGNSLVLDRIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKTPA 459
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
LE+V P E++KK L Q+ +RPYWCISRQR WGVPIPV Y ++ +++N A
Sbjct: 460 ADALEQVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPIPVLYSRESGKVVLNSA 519
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWS 760
I+H C L+ + G DFWW SVE+L+ + ++ K DILDIWFDSG +WS
Sbjct: 520 LIEHLCNLLRKEGSIDFWWVKSVEELVPEHLLRELHHEAKDLVKGTDILDIWFDSGSTWS 579
Query: 761 HVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL KDK A +Y+EG DQ GWF SSLL S+A + AP++ +F+HGF VDEKG KMSKS+
Sbjct: 580 AVLGKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGFTVDEKGYKMSKSL 639
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVIS IT+ YG D LRWWVA+H ++ +
Sbjct: 640 GNVISPKQITK-----------------------------KYGTDALRWWVASHGTQHMS 670
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQN 935
+ + +L + +++ KIR ++RYL GV+ I Y++ Y+L +L EF++
Sbjct: 671 ITVSDKLLQQAAENLCKIRGTMRYLKGVIGEKQSGEKLIRTSDKSYLNRYLLSQLVEFES 730
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ LY ++Y R + NF+ N++SA Y L+KDRLYC + L+ TL + +
Sbjct: 731 EVEKLYQAYEYNRVVACVQNFIANQVSAVYVHLIKDRLYCG--DDHELLAIRQTLTHCYQ 788
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L +++ PI+P L EE +S+ + G F
Sbjct: 789 QLCKSLWPIVPFLVEESWSYYDTTGGAF 816
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 267/399 (66%), Gaps = 11/399 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
S Y QR A GKP F+LHDGPPYANG H+GHAVNKILKDITLR + G+RV+Y+
Sbjct: 67 AVSYAYQEQRLAEKGKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQRVNYI 126
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NC 121
PGW GLPIELKA TS S +IR+K++ FA E I +QK EF SWG+LA+W+ N
Sbjct: 127 PGW---GLPIELKA-TSTAPGQSAQEIRQKSRAFAWEAIKSQKEEFSSWGILANWQKDNI 182
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF E++ NQL FYNLY++ +YRDLKPVYWSPSSRTALAE+ELEY +H+S S+Y+
Sbjct: 183 YMTFQPEFIVNQLEMFYNLYEKGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVYV 242
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIV 237
+ LN P+ ++AL+WTTTPW+LP+NQ I +N +LEY + + N ++
Sbjct: 243 RFALN--PSSFDVKDKQIYALVWTTTPWTLPSNQAICYNASLEYVIVRLSDRNQDELYLM 300
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A L+ + Q E+V G+ L ++Y HPI+KEQ +L A V SKGTGLV
Sbjct: 301 ASALMADFEANTQLKCEIVQHLSGELLSKLSYNHPIDKEQSNLPFFDASHVQDSKGTGLV 360
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL++L +KIPV + +G Y+ +A L G ++L G VL + DV
Sbjct: 361 HTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTKEAPDFLRGKSVLDQGNSLVLDRIAEDV 420
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 421 VHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKTPA 459
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 107/163 (65%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +G Y+ +A L G ++L +G VL + DV+ + +HSYP DWRTKKPVI++
Sbjct: 384 FVNEEGTYTKEAPDFLRGKSVLDQGNSLVLDRIAEDVVHSSKLEHSYPIDWRTKKPVIIR 443
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A LE V P E++KK+L Q+ +RPYWCISRQR WGVPI
Sbjct: 444 ASEQWFINTEKLKTPAADALEQVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPI 503
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PV Y ++ +++N A I+H C L+ + G DFWW VE+L+
Sbjct: 504 PVLYSRESGKVVLNSALIEHLCNLLRKEGSIDFWWVKSVEELV 546
>gi|281366294|ref|NP_648837.2| CG5414 [Drosophila melanogaster]
gi|272455213|gb|AAF49539.2| CG5414 [Drosophila melanogaster]
Length = 941
Score = 494 bits (1272), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/628 (41%), Positives = 376/628 (59%), Gaps = 55/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +HIS S+Y++ LN P+ ++AL+WTTTPW+LP+NQ I +N
Sbjct: 217 TALAEAELEYDANHISPSVYVRFALN--PSSFDVKDKQIYALVWTTTPWTLPSNQAICYN 274
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + + N ++A L+ + + Q ++V G+ L ++Y HPI+KE
Sbjct: 275 ASLEYVIVRLSDRNQDELYLMASALMADFEANTQLKCEIVQHLSGELLSKLSYNHPIDKE 334
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q +L A V SKGTGLVH APAHG +DFL++L +KIPV + +G Y+ +A L
Sbjct: 335 QSNLPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTKEAPDFL 394
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 395 RGKSVLDQGNSLVLDRIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKTPA 454
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
LE+V P E++KK L Q+ +RPYWCISRQR WGVPIPV Y ++ +++N A
Sbjct: 455 ADALEQVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPIPVLYSRESGKVVLNSA 514
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWS 760
I+H C L+ + G DFWW SVE+L+ + ++ K DILDIWFDSG +WS
Sbjct: 515 LIEHLCNLLRKEGSIDFWWVKSVEELVPEHLLRELHHEAKDLVKGTDILDIWFDSGSTWS 574
Query: 761 HVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL KDK A +Y+EG DQ GWF SSLL S+A + AP++ +F+HGF VDEKG KMSKS+
Sbjct: 575 AVLGKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGFTVDEKGYKMSKSL 634
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVIS IT+ YG D LRWWVA+H ++ +
Sbjct: 635 GNVISPKQITK-----------------------------KYGTDALRWWVASHGTQHMS 665
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQN 935
+ + +L + +++ KIR ++RYL GV+ I Y++ Y+L +L EF++
Sbjct: 666 ITVSDKLLQQAAENLCKIRGTMRYLKGVIGEKQSGEKLIRTSDKSYLNRYLLSQLVEFES 725
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ LY ++Y R + NF+ N++SA Y L+KDRLYC + L+ TL + +
Sbjct: 726 EVEKLYQAYEYNRVVACVQNFIANQVSAVYVHLIKDRLYCG--DDHELLAIRQTLTHCYQ 783
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L +++ PI+P L EE +S+ + G F
Sbjct: 784 QLCKSLWPIVPFLVEESWSYYDTTGGAF 811
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/399 (51%), Positives = 270/399 (67%), Gaps = 8/399 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
S Y QR A GKP F+LHDGPPYANG H+GHAVNKILKDITLR + G+RV+Y+
Sbjct: 59 AVSYAYQEQRLAEKGKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQRVNYI 118
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NC 121
PGWDCHGLPIELKA TS S +IR+K++ FA E I +QK EF SWG+LA+W+ N
Sbjct: 119 PGWDCHGLPIELKA-TSTAPGQSAQEIRQKSRAFAWEAIKSQKEEFSSWGILANWQKDNI 177
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF E++ NQL FYNLY++ +YRDLKPVYWSPSSRTALAE+ELEY +H+S S+Y+
Sbjct: 178 YMTFQPEFIVNQLEMFYNLYEKGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVYV 237
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIV 237
+ LN P+ ++AL+WTTTPW+LP+NQ I +N +LEY + + N ++
Sbjct: 238 RFALN--PSSFDVKDKQIYALVWTTTPWTLPSNQAICYNASLEYVIVRLSDRNQDELYLM 295
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A L+ + Q E+V G+ L ++Y HPI+KEQ +L A V SKGTGLV
Sbjct: 296 ASALMADFEANTQLKCEIVQHLSGELLSKLSYNHPIDKEQSNLPFFDASHVQDSKGTGLV 355
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL++L +KIPV + +G Y+ +A L G ++L G VL + DV
Sbjct: 356 HTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTKEAPDFLRGKSVLDQGNSLVLDRIAEDV 415
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 416 VHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKTPA 454
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 107/163 (65%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +G Y+ +A L G ++L +G VL + DV+ + +HSYP DWRTKKPVI++
Sbjct: 379 FVNEEGTYTKEAPDFLRGKSVLDQGNSLVLDRIAEDVVHSSKLEHSYPIDWRTKKPVIIR 438
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A LE V P E++KK+L Q+ +RPYWCISRQR WGVPI
Sbjct: 439 ASEQWFINTEKLKTPAADALEQVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPI 498
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PV Y ++ +++N A I+H C L+ + G DFWW VE+L+
Sbjct: 499 PVLYSRESGKVVLNSALIEHLCNLLRKEGSIDFWWVKSVEELV 541
>gi|384948138|gb|AFI37674.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Macaca mulatta]
Length = 1012
Score = 494 bits (1272), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/623 (43%), Positives = 381/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A VE + T +T + + F G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYILAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 IAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIVKLVEQHGSDVWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
HVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 HVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTALVEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVIVRSFAPILPHLAEEVFQHIP 850
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/495 (43%), Positives = 312/495 (63%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A VE++ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYILAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
+W W+LP Q +
Sbjct: 564 VW----WTLPPEQLL 574
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINIADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDVWWTLPPEQLL 574
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 850
>gi|344296469|ref|XP_003419929.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Loxodonta
africana]
Length = 1012
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/634 (43%), Positives = 385/634 (60%), Gaps = 50/634 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ---VPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+HIS+S+Y+K +++ V A LL+G++ + L+WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHISRSVYVKFPVSRPSPVLAPLLDGSSTVSVLVWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
+ +Y+V VK AN I+A V ++ +T +V+ F G L++ T HPI
Sbjct: 311 CYMLDAKYAV--VKCANSGDVYILAADKVTSVASALETKFEVISTFLGADLENGTCTHPI 368
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
++ LLPA V+ +KGTGLVH APAHG +D+ +A + + L+ G ++ AG
Sbjct: 369 FPDKVS-PLLPASHVTVAKGTGLVHTAPAHGMEDYSVASQHSLSMDCLVNEDGIFTDGAG 427
Query: 591 PGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++
Sbjct: 428 PELQNKAVLEEGTDVVIKMLQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNIAD 487
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
IKP A L++V F+P SA + + + +RPYWCISRQR WGVPIPVF D +++N
Sbjct: 488 IKPTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRAWGVPIPVFLHKTKDEVLINS 547
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGIS 758
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG S
Sbjct: 548 QTIEHIIKLVEQHGSDIWWTLPTEQLL-PKEVFSQVGGPDALEYVPGQDILDIWFDSGTS 606
Query: 759 WSHVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
WSHVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMS
Sbjct: 607 WSHVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVAARKKAPYKTVMVHGFTLGEKGEKMS 666
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN ++ + G Q K P YG DVLRWWV A ++
Sbjct: 667 KSLGNAVNPDVVVNGG--------------------QDESKEPPYGADVLRWWV-AESNV 705
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCE 932
V IG + LN+++DD+ K+R++LR+LLG L + T SI YV D YML L
Sbjct: 706 LTEVTIGPSALNAARDDINKLRNTLRFLLGNLSGFNPETDSIPTKDMYVLDQYMLHLLQG 765
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
F N + Y ++ + + R+L F ELS FYF++VKDRLYC+S + R S L
Sbjct: 766 FANKITESYKQYDFGKVVRLLQAFYTRELSNFYFSVVKDRLYCESEDDPKRRSCQTALVE 825
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
I V++R+ API+PHLAEEV+ H+P + S F
Sbjct: 826 ILDVIVRSFAPILPHLAEEVFQHIPYAKEPRSVF 859
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/432 (46%), Positives = 289/432 (66%), Gaps = 26/432 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG H+GHA+NKILKDI R ++++G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDAHVGHALNKILKDIANRYHMMKGSKIH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IR+KA++FA QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGEKAQSLSAVEIREKARSFAKAAAEKQKSAFTRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+ NCY+TFDK+Y NQL FY +Y++ +YR KPV+WSPSSRTALAE+ELEY P+H+S+
Sbjct: 209 D-NCYYTFDKKYEANQLRIFYEMYEKGLVYRAYKPVFWSPSSRTALAEAELEYNPEHISR 267
Query: 178 SIYLKIKLNQ---VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
S+Y+K +++ V A LL+G++ + L+WTT PW++PANQ + + +Y+V VK AN
Sbjct: 268 SVYVKFPVSRPSPVLAPLLDGSSTVSVLVWTTQPWTIPANQAVCYMLDAKYAV--VKCAN 325
Query: 235 ----VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSS 290
I+A V S+ +T EV+ F G L++ T HPI ++ LLPA V+
Sbjct: 326 SGDVYILAADKVTSVASALETKFEVISTFLGADLENGTCTHPIFPDKVS-PLLPASHVTV 384
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL 350
+KGTGLVH APAHG +D+ +A + + L+ G ++ AGP L+ +L +G D V+
Sbjct: 385 AKGTGLVHTAPAHGMEDYSVASQHSLSMDCLVNEDGIFTDGAGPELQNKAVLEEGTDVVI 444
Query: 351 HLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGR 408
+++ ++L E HSYPYDWRTKKPV+++AS+QWF++ IKP T +L +
Sbjct: 445 KMLQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNIADIKP------TAKELLKK 498
Query: 409 VGITHDRPGTAL 420
V PG+AL
Sbjct: 499 VKFI---PGSAL 507
Score = 166 bits (420), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 107/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVNEDGIFTDGAGPELQNKAVLEEGTDVVIKMLQAAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IKP A L+ V F+P SA ++ + + +RPYWCISRQR WGVPIPV
Sbjct: 475 IRASKQWFVNIADIKPTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRAWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F D +++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FLHKTKDEVLINSQTIEHIIKLVEQHGSDIWWTLPTEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
S+ K LYC+S + R S L I V++R+ API+PHLAEEV+ H+P + S F
Sbjct: 800 SVVKDRLYCESEDDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPYAKEPRSVF 859
>gi|195126433|ref|XP_002007675.1| GI13074 [Drosophila mojavensis]
gi|193919284|gb|EDW18151.1| GI13074 [Drosophila mojavensis]
Length = 943
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/629 (42%), Positives = 374/629 (59%), Gaps = 55/629 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY P +S S+YL+ LN + A ++AL+WTTTPW+LP+NQ I +N
Sbjct: 215 TALAEAELEYDPKFVSPSVYLRFVLNGLAAAEAAQGKQVYALVWTTTPWTLPSNQAICYN 274
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + + N ++A LV + + + Q +VV PG L+D +Y HPI+K
Sbjct: 275 SSLEYVLVKLLDRNPNELYLMASALVADFENSTQLKCEVVERLPGSTLKDCSYQHPIDKT 334
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q L A V +KGTGLVH APAHG DDFL++LA K+PV + G Y+ +A L
Sbjct: 335 QGKLPFFEATHVQDTKGTGLVHTAPAHGPDDFLISLANKLPVKCYVNESGIYTQEAPEFL 394
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ ++HSYP DWRTK+PVI++AS+QWFI+T+++K A
Sbjct: 395 RGQSVLAQGNPLVLQHIADDVVHASQFEHSYPIDWRTKQPVIIRASEQWFINTDKLKAPA 454
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEA 707
A LE V P ES+KK L Q+ +RPYWCISRQR WGVPIPV Y D + +++N A
Sbjct: 455 AAALERVQIYPRVNAESSKKALLTQLHKRPYWCISRQRAWGVPIPVLYKRDNNQVVLNGA 514
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWS 760
I+H C L+ G DFWWS S+E+LL + + + NDI DIWFDSG +WS
Sbjct: 515 LIEHLCGLLRSEGSMDFWWSKSLEELLPDQLLKQLGCEAKELCRGNDIFDIWFDSGSTWS 574
Query: 761 HVLKDKP---AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
VLKD+P A +Y+EG DQ GWF SSLLTS+A ++ AP+R +F+HGF VDEKG KMSK
Sbjct: 575 AVLKDQPQQVADLYLEGYDQFTGWFQSSLLTSIAARNCAPYRALFVHGFTVDEKGHKMSK 634
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI S IT+ YG DVLRWWVA+H ++
Sbjct: 635 SLGNVI-----------------------SPKQITK------KYGTDVLRWWVASHGTQH 665
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS---RYVDVYMLKRLCEFQ 934
++ + ++ + +++ K+R +LRYL GV+ N E +S Y++ Y+L L EF+
Sbjct: 666 MSITVSDKLMQQAAENLSKVRGTLRYLNGVI-NQKEQKLCMSINDSYLNKYLLHSLVEFE 724
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
++ LY ++Y R + NF+ N++S+ Y L+KDRLYC N + +TL +
Sbjct: 725 EEIEKLYNAYEYNRVVACIQNFIANQVSSIYVHLIKDRLYCG--NKQELQDIRYTLTQCY 782
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
+ + + PI P+L EE +S+ F
Sbjct: 783 RQICKALWPIAPYLTEESWSYYAPTGSAF 811
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/391 (50%), Positives = 265/391 (67%), Gaps = 6/391 (1%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y +Q E KP F+LHDGPPYANG H+GHAVNKILKDITLR + G++V+Y+PGWDC
Sbjct: 62 YQYQ-EQHKRKPAFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQQVNYIPGWDC 120
Query: 68 HGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE-HNCYHTFD 126
HGLPIELKA ++ S L+IR+K++ FALE I +QK +F SWG+LA W+ Y TF
Sbjct: 121 HGLPIELKATSAATGEQSALEIRQKSRAFALEAIESQKEDFRSWGILASWQPEQIYLTFK 180
Query: 127 KEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN 186
E++ NQL FY+LY++ +YRDLKPVYWSPSS+TALAE+ELEY P VS S+YL+ LN
Sbjct: 181 PEFIANQLQMFYSLYERGLVYRDLKPVYWSPSSKTALAEAELEYDPKFVSPSVYLRFVLN 240
Query: 187 QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLV 242
+ A ++AL+WTTTPW+LP+NQ I +N +LEY + + N ++A LV
Sbjct: 241 GLAAAEAAQGKQVYALVWTTTPWTLPSNQAICYNSSLEYVLVKLLDRNPNELYLMASALV 300
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ + Q EVV PG L+D +Y HPI+K Q L A V +KGTGLVH APA
Sbjct: 301 ADFENSTQLKCEVVERLPGSTLKDCSYQHPIDKTQGKLPFFEATHVQDTKGTGLVHTAPA 360
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG DDFL++LA K+PV + G Y+ +A L G ++L G VL + DV+
Sbjct: 361 HGPDDFLISLANKLPVKCYVNESGIYTQEAPEFLRGQSVLAQGNPLVLQHIADDVVHASQ 420
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIK 393
++HSYP DWRTK+PVI++AS+QWFI+T+++K
Sbjct: 421 FEHSYPIDWRTKQPVIIRASEQWFINTDKLK 451
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 107/162 (66%), Gaps = 7/162 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ G Y+ +A L G ++L +G VL + DV+ ++HSYP DWRTK+PVI++A
Sbjct: 380 VNESGIYTQEAPEFLRGQSVLAQGNPLVLQHIADDVVHASQFEHSYPIDWRTKQPVIIRA 439
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
S+QWFI+T+++K A A LE V P ES+KK+L Q+ +RPYWCISRQR WGVPIP
Sbjct: 440 SEQWFINTDKLKAPAAAALERVQIYPRVNAESSKKALLTQLHKRPYWCISRQRAWGVPIP 499
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
V Y D + +++N A I+H C L+ G DFWWS +E+LL
Sbjct: 500 VLYKRDNNQVVLNGALIEHLCGLLRSEGSMDFWWSKSLEELL 541
>gi|380814548|gb|AFE79148.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Macaca mulatta]
Length = 1012
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/623 (42%), Positives = 381/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A VE + T +T + + F G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 IAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIVKLVEQHGSDVWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
HVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 HVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTALVEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVIVRSFAPILPHLAEEVFQHIP 850
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 312/495 (63%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A VE++ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
+W W+LP Q +
Sbjct: 564 VW----WTLPPEQLL 574
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINIADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDVWWTLPPEQLL 574
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 850
>gi|67970170|dbj|BAE01429.1| unnamed protein product [Macaca fascicularis]
Length = 940
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/623 (42%), Positives = 381/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 179 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAV 238
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A VE + T +T + + F G L++ T HP+
Sbjct: 239 CYMPESKYAVVKCSKSGDLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIP 298
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 299 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 357
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 358 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK 417
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 418 IAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 478 IEHIVKLVEQHGSDVWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 536
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
HVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 537 HVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPYKTVIVHGFTLGEKGEKMSKS 596
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 597 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 635
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 636 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 695
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 696 NKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTALVEIL 755
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 756 DVIVRSFAPILPHLAEEVFQHIP 778
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 313/495 (63%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 18 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 76
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 77 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 136
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 137 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 195
Query: 178 SIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K +K + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 196 SIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 255
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A VE++ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 256 DLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 314
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 315 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 374
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 375 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIPGSA 434
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 435 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 491
Query: 460 IWTTTPWSLPANQFI 474
+W W+LP Q +
Sbjct: 492 VW----WTLPPEQLL 502
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 343 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 402
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 403 IRASKQWFINIADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 462
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 463 FHHKTKDEYLINSQTIEHIVKLVEQHGSDVWWTLPPEQLL 502
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 728 SIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 778
>gi|296479298|tpg|DAA21413.1| TPA: isoleucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
Length = 919
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/623 (42%), Positives = 382/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+HIS+S+Y+K L + A LL+G++ + L+WTT PW++PANQ +
Sbjct: 158 TALAEAELEYNPEHISRSVYVKFPLLKPSPKLASLLDGSSPVSFLVWTTQPWTIPANQAV 217
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+ V ++ T T +V+ F G L++ + HP+
Sbjct: 218 CYMPESKYAVVKCSSSGDLYILGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLIS 277
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
E R+ LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G ++ AGP
Sbjct: 278 E-RESPLLPANHVTMTKGTGLVHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPE 336
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++ IK
Sbjct: 337 LQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIK 396
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D +++N
Sbjct: 397 TTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDDVLINSQT 456
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L++EHG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 457 IEHIIQLVEEHGSDIWWTLPPEQLL-PKEVLSQVGGPDALEYVPGQDILDIWFDSGTSWS 515
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA ++ +PF+ V +HGF + EKG KMSKS
Sbjct: 516 NVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVAARNKSPFKTVVVHGFTLGEKGEKMSKS 575
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I + G Q K P YG DVLRWWV A ++
Sbjct: 576 LGNIIDPDVVINGG--------------------QDHSKEPPYGADVLRWWV-AESNVFT 614
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQ 934
V I ++LN+++DD+ K+R++LR+LLG + + T SI S YV D YML L +
Sbjct: 615 EVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIPVNSMYVIDQYMLHLLQDLA 674
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N ++ Y ++ + + R+L F ELS FYF+++KDRLYC++ + R S L I
Sbjct: 675 NKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYCENADDPKRRSCQTALAEIL 734
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 735 DVMVRSFAPILPHLAEEVFQHIP 757
Score = 378 bits (971), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/426 (46%), Positives = 275/426 (64%), Gaps = 22/426 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
SELYSWQRE K EF DGPPYANG PH+GHA+NKILKDI R ++++G ++H+VPG
Sbjct: 1 SELYSWQRER-KVKAEFCXFDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIHFVPG 59
Query: 65 WDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WDCHGLPIE+K ++ K + LS ++IR+KA++FA I QK F WG++ADW +NC
Sbjct: 60 WDCHGLPIEIKVLSELGGKAQNLSAMEIREKARSFAKAAIEKQKLSFIRWGIMADW-NNC 118
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y+TFD Y QL FY +Y + IYR KPV+WSPSSRTALAE+ELEY P+H+S+S+Y+
Sbjct: 119 YYTFDGRYEAKQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHISRSVYV 178
Query: 182 KIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKGANVI 236
K L + A LL+G++ + L+WTT PW++PANQ + + P +Y+V S G I
Sbjct: 179 KFPLLKPSPKLASLLDGSSPVSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSSSGDLYI 238
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
+ V S+ T T EV+ F G L++ + HP+ E R+ LLPA V+ +KGTGL
Sbjct: 239 LGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLISE-RESPLLPANHVTMTKGTGL 297
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP- 355
VH APAHG +D+ +A + L+ G ++ AGP L+ +L +G D V+ +++
Sbjct: 298 VHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAA 357
Query: 356 -DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHD 414
++L E HSYPYDWRTKKPV+++AS+QWF++ IK T +L +V
Sbjct: 358 KNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIK------TTAKELLKKVKFI-- 409
Query: 415 RPGTAL 420
PG+AL
Sbjct: 410 -PGSAL 414
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 322 LVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKPVV 381
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P SA ++ + + +RPYWCISRQRVWGVPIPV
Sbjct: 382 IRASKQWFVNITDIKTTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRVWGVPIPV 441
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D +++N I+H L++EHG D WW+LP EQLL
Sbjct: 442 FHHKTKDDVLINSQTIEHIIQLVEEHGSDIWWTLPPEQLL 481
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC++ + R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 707 SIIKDRLYCENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIP 757
>gi|94730584|sp|Q4R646.2|SYIM_MACFA RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
Precursor
Length = 993
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/623 (42%), Positives = 381/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 232 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAV 291
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A VE + T +T + + F G L++ T HP+
Sbjct: 292 CYMPESKYAVVKCSKSGDLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIP 351
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 352 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 410
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 411 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK 470
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 471 IAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 530
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 531 IEHIVKLVEQHGSDVWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 589
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
HVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 590 HVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPYKTVIVHGFTLGEKGEKMSKS 649
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 650 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 688
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 689 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 748
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 749 NKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTALVEIL 808
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 809 DVIVRSFAPILPHLAEEVFQHIP 831
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 312/495 (63%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 71 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 129
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 130 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 189
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 190 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 248
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 249 SIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 308
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A VE++ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 309 DLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 367
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 368 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 427
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 428 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIPGSA 487
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 488 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 544
Query: 460 IWTTTPWSLPANQFI 474
+W W+LP Q +
Sbjct: 545 VW----WTLPPEQLL 555
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 396 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 455
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 456 IRASKQWFINIADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 515
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 516 FHHKTKDEYLINSQTIEHIVKLVEQHGSDVWWTLPPEQLL 555
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 781 SIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 831
>gi|126307099|ref|XP_001375630.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Monodelphis
domestica]
Length = 1017
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/633 (42%), Positives = 381/633 (60%), Gaps = 48/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P HIS+S+Y+K L + P A +L+G + + A+IWTT PW++PANQ +
Sbjct: 256 TALAEAELEYNPKHISRSVYVKFPLVKPPPLLASVLDGLSPVSAIIWTTQPWTIPANQAV 315
Query: 475 AFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
+ P +YS+ +K AN IV V++ T +V+ F G L+ + HP
Sbjct: 316 CYMPEAKYSI--IKCANSGEFYIVGADKVQSTATALGTQFEVISTFLGADLESASCAHPT 373
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
++ LLPA V+ SKGTGLVH APAHG +D+ +A K+P L+ G ++ AG
Sbjct: 374 IADKVS-PLLPANHVTMSKGTGLVHTAPAHGMEDYSVASMHKLPTDCLVDENGIFTEAAG 432
Query: 591 PGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
L+ N+L +G D V+ ++E ++L E HSYPYDWRTKKPVI++ S QWFI E
Sbjct: 433 RELQNKNVLEEGVDIVIKMLESTKNLLKEEQVTHSYPYDWRTKKPVIIRPSMQWFIKIEN 492
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ A L++V F+P SA ++ D + +RP+WCISRQR WGVPIPVF+ D I++N
Sbjct: 493 MFASAQESLKKVKFLPASAMNSMVDTMERRPFWCISRQRTWGVPIPVFHHKTKDEILINS 552
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISW 759
I+H L+++HG D WW+L E+LL + DILDIWF+SG SW
Sbjct: 553 QTIEHLVKLVEKHGSDIWWTLPPEELLPKEILAKLGGPDKLEYVPGQDILDIWFESGTSW 612
Query: 760 SHVLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
+ VL+ ++ A +Y+EG DQ+ GWF SSLL SVA + APF+ V +HGF V EKG KMSK
Sbjct: 613 NCVLQGPEQRADLYLEGKDQLGGWFHSSLLISVATRKKAPFKTVLVHGFTVGEKGEKMSK 672
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVIS + G + L K P YGVD+LRWW+ A ++
Sbjct: 673 SLGNVISPDFVINGGEDL--------------------SKDPPYGVDILRWWI-AESNIF 711
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V IG ILN+++DD+ K+R++LR+LLG L + + T ++S +D YML L +F
Sbjct: 712 NEVKIGPRILNAARDDINKLRNTLRFLLGNLADFNPETDAVSIKNMYIIDQYMLHLLQDF 771
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
N + Y +F + + R+L F ++LS FYF++VKDRLYC+ + R S L I
Sbjct: 772 GNKITEAYRQFDFGKVVRLLQAFYPSQLSNFYFSIVKDRLYCEKEDDPKRRSCQTALAEI 831
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
V++R++API+PHLAEEVY H+P + S F
Sbjct: 832 LDVMVRSIAPILPHLAEEVYQHIPYEKEPKSVF 864
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/404 (50%), Positives = 272/404 (67%), Gaps = 17/404 (4%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQR+ N K EF LHDGPPYANG H+GHA+NK+LKDI+ R +++G +VH
Sbjct: 95 KCGFSELYSWQRKR-NVKQEFCLHDGPPYANGEAHVGHALNKVLKDISNRFQMMRGLKVH 153
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIELKA++ K + LSP++IRKKA+ FA I QK+ F WG++ADW
Sbjct: 154 FVPGWDCHGLPIELKALSELGEKAQNLSPMEIRKKARAFAEAAIEKQKSAFIRWGIMADW 213
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCYHTFD +Y QL FY +Y +D IYR KPV+WSPS+RTALAE+ELEY P H+S+
Sbjct: 214 -NNCYHTFDGKYEAQQLKIFYQMYAKDMIYRAYKPVFWSPSARTALAEAELEYNPKHISR 272
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
S+Y+K L + P A +L+G + + A+IWTT PW++PANQ + + P +YS+ +K AN
Sbjct: 273 SVYVKFPLVKPPPLLASVLDGLSPVSAIIWTTQPWTIPANQAVCYMPEAKYSI--IKCAN 330
Query: 235 ----VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSS 290
IV V+S T EV+ F G L+ + HP ++ LLPA V+
Sbjct: 331 SGEFYIVGADKVQSTATALGTQFEVISTFLGADLESASCAHPTIADKVS-PLLPANHVTM 389
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL 350
SKGTGLVH APAHG +D+ +A K+P L+ G ++ AG L+ N+L +G D V+
Sbjct: 390 SKGTGLVHTAPAHGMEDYSVASMHKLPTDCLVDENGIFTEAAGRELQNKNVLEEGVDIVI 449
Query: 351 HLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 392
++E ++L E HSYPYDWRTKKPVI++ S QWFI E +
Sbjct: 450 KMLESTKNLLKEEQVTHSYPYDWRTKKPVIIRPSMQWFIKIENM 493
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 128/244 (52%), Gaps = 23/244 (9%)
Query: 1043 ILYCDSINGEARLSG--LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFS---SF 1097
I+ D + A G + L + + P +A++V LP+ T S
Sbjct: 336 IVGADKVQSTATALGTQFEVISTFLGADLESASCAHPTIADKVSPLLPANHVTMSKGTGL 395
Query: 1098 CHFKVYHHLN--------------LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP- 1142
H H + L+ G ++ AG L+ N+L EG D V+ ++E
Sbjct: 396 VHTAPAHGMEDYSVASMHKLPTDCLVDENGIFTEAAGRELQNKNVLEEGVDIVIKMLEST 455
Query: 1143 -DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSL 1201
++L E HSYPYDWRTKKPVI++ S QWFI E + A L+ V F+P SA S+
Sbjct: 456 KNLLKEEQVTHSYPYDWRTKKPVIIRPSMQWFIKIENMFASAQESLKKVKFLPASAMNSM 515
Query: 1202 RDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPV 1259
D + +RP+WCISRQR WGVPIPVF+ D I++N I+H L+++HG D WW+LP
Sbjct: 516 VDTMERRPFWCISRQRTWGVPIPVFHHKTKDEILINSQTIEHLVKLVEKHGSDIWWTLPP 575
Query: 1260 EQLL 1263
E+LL
Sbjct: 576 EELL 579
>gi|332020768|gb|EGI61172.1| Isoleucyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
Length = 933
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/622 (42%), Positives = 373/622 (59%), Gaps = 50/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD------LHALIWTTTPWSLPAN 471
TALAESELEY H SKS+ ++++L+ H L + L+ALIWTTTPWSL AN
Sbjct: 198 TALAESELEYNESHKSKSVIIRMRLDM---HALASKSKDLENKPLYALIWTTTPWSLIAN 254
Query: 472 QFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
Q IAF+ + Y + K N+ I+A+ + N++ + + GQ L + Y+HPI
Sbjct: 255 QAIAFSNNIVYCIVEDKSKNLYILAQECLANIEQKLGP-LKFITTVTGQELGEAKYLHPI 313
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+++ L L V++ GTGLVH APAHG +DFL+A+ IPVL+LI G ++ +AG
Sbjct: 314 TRQR--LPFLSGHHVTTDVGTGLVHTAPAHGPEDFLIAIENNIPVLSLIDVDGCFTKEAG 371
Query: 591 PGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
GLN+L +G ++VL + DVL T+ HSYPYDWRTKKPVI++AS QWFID IK
Sbjct: 372 DEFSGLNVLNNGANKVLQHIGEDVLHTDTITHSYPYDWRTKKPVIIRASHQWFIDIMSIK 431
Query: 651 PEALACLEEVNFVPESAKKT----LRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTII 703
+A+ + + PE + + L Q+ QRPYWCISRQR WG PIPV ++ GDT
Sbjct: 432 EKAIDSIANIRIYPEQNQTSYLNALVAQVKQRPYWCISRQRSWGTPIPVLHNKRTGDT-Y 490
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLN---TSDVNSNV---TKSNDILDIWFDSGI 757
+ ++ C L++ HG ++WW LS E+L+ +N N+ + +DI+DIW DSG+
Sbjct: 491 TSRKWVERLCRLMERHGTNYWWELSTEKLIGHELRQKLNDNIDDFERGSDIMDIWLDSGL 550
Query: 758 SWSHVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
SWS +L + A +Y+EGMDQ GWF SSLLTS+AL+ +P+ +F+HGF VD+K +KMSK
Sbjct: 551 SWS-ILPEHKADLYLEGMDQFRGWFQSSLLTSIALQERSPYSALFVHGFAVDDKASKMSK 609
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
SVGNVI+ I +G K L K PAYGVD LRWW+A+H +
Sbjct: 610 SVGNVINPETIIKGGKNL--------------------SKDPAYGVDTLRWWIASHGCQH 649
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR--YVDVYMLKRLCEFQN 935
VP+ +L S + +QK+R LR+LLGVLH+ SE Y+D YML L ++
Sbjct: 650 SQVPVTTALLRQSHESIQKMRLVLRFLLGVLHSCSEGITVEPEYLYLDKYMLHCLHQYNK 709
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ LY + Y S+++ F+ N +S Y L+KDRLYCD RL+ +
Sbjct: 710 KIQNLYDNYLYHHVSKLVTYFLTNTVSPVYCHLIKDRLYCDEAASPTRLAAVEVTRETLT 769
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
VL R++API+PHLAEEV+ + P
Sbjct: 770 VLARSIAPIVPHLAEEVWLYHP 791
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/413 (51%), Positives = 282/413 (68%), Gaps = 18/413 (4%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGF ELY+WQR+ L G P+FILHDGPPYANG PH+GHA+NKILKDITLRS ++ G+RVH
Sbjct: 39 KCGFLELYNWQRKNLEG-PDFILHDGPPYANGEPHMGHAINKILKDITLRSKIMSGRRVH 97
Query: 61 YVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EH 119
Y+PGWDCHGLPIE K + S K +PL+IR+KA+ +A + I Q+ F SWGV+ADW E
Sbjct: 98 YIPGWDCHGLPIEQKVL-SDIKDSNPLEIRRKAERYASDNIIKQRQAFTSWGVMADWNES 156
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
CY T YVKNQ+ QF NLY + ++R KPVYWSPSS+TALAESELEY H SKS+
Sbjct: 157 GCYFTNHISYVKNQMQQFINLYDKGLVFRAFKPVYWSPSSKTALAESELEYNESHKSKSV 216
Query: 180 YLKIKLNQVPAHLLEGATD------LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA 233
++++L+ H L + L+ALIWTTTPWSL ANQ IAF+ + Y + K
Sbjct: 217 IIRMRLDM---HALASKSKDLENKPLYALIWTTTPWSLIANQAIAFSNNIVYCIVEDKSK 273
Query: 234 NV-IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N+ I+A+ + +++ ++ + GQ L + Y+HPI +++ L L V++
Sbjct: 274 NLYILAQECLANIEQKLGP-LKFITTVTGQELGEAKYLHPITRQR--LPFLSGHHVTTDV 330
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +DFL+A+ IPVL+LI G ++ +AG GLN+L +G ++VL
Sbjct: 331 GTGLVHTAPAHGPEDFLIAIENNIPVLSLIDVDGCFTKEAGDEFSGLNVLNNGANKVLQH 390
Query: 353 VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+ DVL T+ HSYPYDWRTKKPVI++AS QWFID IK +A+ ++ NI
Sbjct: 391 IGEDVLHTDTITHSYPYDWRTKKPVIIRASHQWFIDIMSIKEKAI--DSIANI 441
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVI 1165
L+LI G ++ +AG GLN+L G ++VL + DVL T+ HSYPYDWRTKKPVI
Sbjct: 357 LSLIDVDGCFTKEAGDEFSGLNVLNNGANKVLQHIGEDVLHTDTITHSYPYDWRTKKPVI 416
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKS----LRDQIAQRPYWCISRQRVWGV 1221
++AS QWFID IK +A+ + + PE + S L Q+ QRPYWCISRQR WG
Sbjct: 417 IRASHQWFIDIMSIKEKAIDSIANIRIYPEQNQTSYLNALVAQVKQRPYWCISRQRSWGT 476
Query: 1222 PIPVFYD---GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN---TSDVNSNVTKS 1275
PIPV ++ GDT + ++ C L++ HG ++WW L E+L+ +N N+
Sbjct: 477 PIPVLHNKRTGDT-YTSRKWVERLCRLMERHGTNYWWELSTEKLIGHELRQKLNDNIDDF 535
Query: 1276 NQG 1278
+G
Sbjct: 536 ERG 538
>gi|332164770|ref|NP_001193724.1| isoleucyl-tRNA synthetase, mitochondrial [Bos taurus]
Length = 1012
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/623 (42%), Positives = 382/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+HIS+S+Y+K L + A LL+G++ + L+WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHISRSVYVKFPLLKPSPKLASLLDGSSPVSFLVWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+ V ++ T T +V+ F G L++ + HP+
Sbjct: 311 CYMPESKYAVVKCSSSGDLYILGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLIS 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
E R+ LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G ++ AGP
Sbjct: 371 E-RESPLLPANHVTMTKGTGLVHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++ IK
Sbjct: 430 LQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D +++N
Sbjct: 490 TTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDDVLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L++EHG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIIQLVEEHGSDIWWTLPPEQLL-PKEVLSQVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA ++ +PF+ V +HGF + EKG KMSKS
Sbjct: 609 NVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVAARNKSPFKTVVVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNIIDPDVVINGG--------------------QDHSKEPPYGADVLRWWV-AESNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQ 934
V I ++LN+++DD+ K+R++LR+LLG + + T SI S YV D YML L +
Sbjct: 708 EVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIPVNSMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N ++ Y ++ + + R+L F ELS FYF+++KDRLYC++ + R S L I
Sbjct: 768 NKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYCENADDPKRRSCQTALAEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVMVRSFAPILPHLAEEVFQHIP 850
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 281/430 (65%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKAEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IR+KA++FA I QK F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGGKAQNLSAMEIREKARSFAKAAIEKQKLSFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD Y QL FY +Y + IYR KPV+WSPSSRTALAE+ELEY P+H+S+
Sbjct: 209 -NNCYYTFDGRYEAKQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHISR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
S+Y+K L + A LL+G++ + L+WTT PW++PANQ + + P +Y+V S G
Sbjct: 268 SVYVKFPLLKPSPKLASLLDGSSPVSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSSSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+ V S+ T T EV+ F G L++ + HP+ E R+ LLPA V+ +K
Sbjct: 328 DLYILGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLISE-RESPLLPANHVTMTK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A + L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ ++L E HSYPYDWRTKKPV+++AS+QWF++ IK T +L +V
Sbjct: 447 LQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIK------TTAKELLKKVK 500
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 501 FI---PGSAL 507
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P SA ++ + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFVNITDIKTTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D +++N I+H L++EHG D WW+LP EQLL
Sbjct: 535 FHHKTKDDVLINSQTIEHIIQLVEEHGSDIWWTLPPEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC++ + R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIP 850
>gi|426240262|ref|XP_004014031.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Ovis aries]
Length = 951
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/623 (42%), Positives = 380/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+S+Y+K L + A LL+G++ + L+WTT PW++PANQ +
Sbjct: 190 TALAEAELEYNPEHVSRSVYVKFPLLKPSPKLASLLDGSSPVSFLVWTTQPWTIPANQAV 249
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+ V ++ T T +V+ F G L + T HP+
Sbjct: 250 CYMPESKYAVVKCSSSGDLYILGADKVTSVASTLGTTFEVISTFSGVDLGNGTCAHPLIS 309
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
E R+ LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G ++ AGP
Sbjct: 310 E-RESPLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHNLSTDCLVNEDGVFTDAAGPE 368
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++ IK
Sbjct: 369 LQNKAVLKEGTDAVIMMLQAAKNLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDIK 428
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQR WGVPIPVF+ D +++N
Sbjct: 429 TTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRAWGVPIPVFHHKTKDEVLINSQT 488
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
++H L++EHG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 489 VEHIIKLVEEHGSDIWWTLPPEQLL-PKEVLSQVGGPDALEYVPGQDILDIWFDSGTSWS 547
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA ++ +PF+ V +HGF + EKG KMSKS
Sbjct: 548 NVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVAARNKSPFKTVVVHGFTLGEKGEKMSKS 607
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 608 LGNVIDPDVVINGG--------------------QDHSKEPPYGADVLRWWV-AESNVFT 646
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQ 934
V I ++LN+++DD+ K+R++LR+LLG + + T SI S YV D YML L +
Sbjct: 647 EVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIPVNSMYVIDQYMLHLLQDLA 706
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N ++ Y ++ + + R+L F ELS FYF+++KDRLYC++ + R S L I
Sbjct: 707 NKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYCENADDPKRRSCQTALAEIL 766
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 767 DVMVRSFAPILPHLAEEVFQHIP 789
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 280/430 (65%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 29 KCGFSELYSWQRER-KAKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIH 87
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IR+KA++FA I QK F WG++ADW
Sbjct: 88 FVPGWDCHGLPIEMKVLSELGGKAQNLSAMEIREKARSFAKAAIEKQKLAFIRWGIMADW 147
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD Y QL FY +Y + IYR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 148 -NNCYYTFDGRYEARQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 206
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
S+Y+K L + A LL+G++ + L+WTT PW++PANQ + + P +Y+V S G
Sbjct: 207 SVYVKFPLLKPSPKLASLLDGSSPVSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSSSG 266
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+ V S+ T T EV+ F G L + T HP+ E R+ LLPA V+ +K
Sbjct: 267 DLYILGADKVTSVASTLGTTFEVISTFSGVDLGNGTCAHPLISE-RESPLLPANHVTMTK 325
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A + L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 326 GTGLVHTAPAHGMEDYSVASQHNLSTDCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMM 385
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ ++L E HSYPYDWRTKKPV+++AS+QWF++ IK T +L +V
Sbjct: 386 LQAAKNLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDIK------TTAKELLKKVK 439
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 440 FI---PGSAL 446
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 107/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 354 LVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAAKNLLKEEELVHSYPYDWRTKKPVV 413
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P SA ++ + + +RPYWCISRQR WGVPIPV
Sbjct: 414 IRASKQWFVNITDIKTTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRAWGVPIPV 473
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D +++N ++H L++EHG D WW+LP EQLL
Sbjct: 474 FHHKTKDEVLINSQTVEHIIKLVEEHGSDIWWTLPPEQLL 513
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC++ + R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 739 SIIKDRLYCENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIP 789
>gi|332231893|ref|XP_003265129.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Nomascus
leucogenys]
Length = 1012
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/623 (42%), Positives = 381/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + F G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETMSTFSGVDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 TAARELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVIVRSFAPILPHLAEEVFQHIP 850
Score = 385 bits (988), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/495 (43%), Positives = 310/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG H+GHA+NKILKDI R +++ G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDAHVGHALNKILKDIANRFHMMNGSKIH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAVEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVASVASTLETTFETMSTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAARELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 564 IW----WTLPPEQLL 574
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINITDIKTAARELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDIWWTLPPEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 850
>gi|114572728|ref|XP_514209.2| PREDICTED: isoleucine--tRNA ligase, mitochondrial isoform 3 [Pan
troglodytes]
gi|410224418|gb|JAA09428.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
gi|410259032|gb|JAA17482.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
gi|410308538|gb|JAA32869.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
gi|410330099|gb|JAA33996.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
Length = 1012
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/623 (42%), Positives = 380/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVIHPAVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVMVRSFAPILPHLAEEVFQHIP 850
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 310/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IRKKA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 564 IW----WTLPPEQLL 574
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDIWWTLPPEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPKRRSCQTALVEILDVMVRSFAPILPHLAEEVFQHIP 850
>gi|426333832|ref|XP_004028473.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Gorilla gorilla
gorilla]
Length = 1012
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/623 (42%), Positives = 380/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLAPLIDGSSPVSILVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVAIGPSVLNAARDDISKLRNTLRFLLGNMADFNPETDSIPVNDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVIVRSFAPILPHLAEEVFQHIP 850
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 311/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IRKKA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K +K + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLAPLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 564 IW----WTLPPEQLL 574
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDIWWTLPPEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 850
>gi|26331214|dbj|BAC29337.1| unnamed protein product [Mus musculus]
Length = 1012
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/622 (42%), Positives = 374/622 (60%), Gaps = 44/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY++ L + P L + ++ + L+WTT PW++PANQ I
Sbjct: 251 TALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAI 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A+ + + +T DVV F G L+ T HP+
Sbjct: 311 CYMPEAKYAVVKCSASGHLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK
Sbjct: 430 LQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L+ V F+P +A ++ D + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 AAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
+H L+++HG D WW+L EQLL + DILDIWFDSG SWS
Sbjct: 550 TEHIIKLVEQHGSDVWWTLPAEQLLPAEVLAQAGGPGALEYAPGQDILDIWFDSGTSWSC 609
Query: 762 VLKD--KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+D + A +Y+EG DQ+ GWF SSLLTSVA + APFR V +HGF + EKG KMSKS+
Sbjct: 610 VLQDTQQRADLYLEGKDQLGGWFQSSLLTSVATRSKAPFRTVMVHGFTLGEKGEKMSKSL 669
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI+ I G K K P YG D+LRWW+ A ++
Sbjct: 670 GNVINPDTIISGGKD--------------------HSKEPPYGADILRWWI-AESNVFTE 708
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQN 935
V IG ++L++++DD+ K+R++LR+LLG L + T S+ + YV D YML + +F
Sbjct: 709 VTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVPVKNMYVIDQYMLHLIQDFAT 768
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++ + + R+L F ELS+FYF++VKDRLYC++ R S L I
Sbjct: 769 KITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYCENEKDPKRRSCQTALAEILD 828
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
VL+R API+PHLAEEV+ H+P
Sbjct: 829 VLVRAFAPILPHLAEEVFQHIP 850
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/512 (43%), Positives = 311/512 (60%), Gaps = 39/512 (7%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYA G PH+GHA+NKILKDI R ++++G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYAKGDPHVGHALNKILKDIANRFHMMRGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE K ++ + LS ++IR+KA++FA I QK+ F WGV+ADW
Sbjct: 149 FVPGWDCHGLPIETKVLSELGVDAQSLSAMEIREKARSFAQAAIEKQKSAFVRWGVMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y++ +YR KPVYWSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVPAH---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY++ L + P L + ++ + L+WTT PW++PANQ I + P +Y+V S G
Sbjct: 268 SIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAICYMPEAKYAVVKCSASG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A+ + + +T +VV F G L+ T HP+ ++ LLPA V+ +K
Sbjct: 328 HLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVS-PLLPATHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVGNILG-- 407
++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK A KTV I G
Sbjct: 447 LQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIPGAA 506
Query: 408 ---RVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
+ RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNSMTDMLDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIIKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI-------AFNP-ALEYS 483
+W W+LPA Q + A P ALEY+
Sbjct: 564 VW----WTLPAEQLLPAEVLAQAGGPGALEYA 591
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +VL EN HSYP DWRTK PV+
Sbjct: 415 LVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVL 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P +A S+ D + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFVNITDIKAAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTTEHIIKLVEQHGSDVWWTLPAEQLL 574
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC++ R S L I VL+R API+PHLAEEV+ H+P
Sbjct: 800 SIVKDRLYCENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIP 850
>gi|38490690|ref|NP_941055.1| isoleucine--tRNA ligase, mitochondrial precursor [Mus musculus]
gi|81896262|sp|Q8BIJ6.1|SYIM_MOUSE RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
Precursor
gi|26339478|dbj|BAC33410.1| unnamed protein product [Mus musculus]
gi|30931090|gb|AAH52403.1| Isoleucine-tRNA synthetase 2, mitochondrial [Mus musculus]
Length = 1012
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/622 (42%), Positives = 374/622 (60%), Gaps = 44/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY++ L + P L + ++ + L+WTT PW++PANQ I
Sbjct: 251 TALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAI 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A+ + + +T DVV F G L+ T HP+
Sbjct: 311 CYMPEAKYAVVKCSASGHLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK
Sbjct: 430 LQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L+ V F+P +A ++ D + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 AAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
+H L+++HG D WW+L EQLL + DILDIWFDSG SWS
Sbjct: 550 TEHIIKLVEQHGSDVWWTLPAEQLLPAEVLAQAGGPGALEYAPGQDILDIWFDSGTSWSC 609
Query: 762 VLKD--KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+D + A +Y+EG DQ+ GWF SSLLTSVA + APFR V +HGF + EKG KMSKS+
Sbjct: 610 VLQDTQQRADLYLEGKDQLGGWFQSSLLTSVATRSKAPFRTVMVHGFTLGEKGEKMSKSL 669
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI+ I G K K P YG D+LRWW+ A ++
Sbjct: 670 GNVINPDTIISGGKD--------------------HSKEPPYGADILRWWI-AESNVFTE 708
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQN 935
V IG ++L++++DD+ K+R++LR+LLG L + T S+ + YV D YML + +F
Sbjct: 709 VTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVPVKNMYVIDQYMLHLIQDFAT 768
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++ + + R+L F ELS+FYF++VKDRLYC++ R S L I
Sbjct: 769 KITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYCENEKDPKRRSCQTALAEILD 828
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
VL+R API+PHLAEEV+ H+P
Sbjct: 829 VLVRAFAPILPHLAEEVFQHIP 850
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/512 (43%), Positives = 312/512 (60%), Gaps = 39/512 (7%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMRGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE K ++ + LS ++IR+KA++FA I QK+ F WGV+ADW
Sbjct: 149 FVPGWDCHGLPIETKVLSELGVDAQSLSAMEIREKARSFAQAAIEKQKSAFVRWGVMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y++ +YR KPVYWSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVPAH---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY++ L + P L + ++ + L+WTT PW++PANQ I + P +Y+V S G
Sbjct: 268 SIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAICYMPEAKYAVVKCSASG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A+ + + +T +VV F G L+ T HP+ ++ LLPA V+ +K
Sbjct: 328 HLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVS-PLLPATHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVGNILG-- 407
++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK A KTV I G
Sbjct: 447 LQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIPGAA 506
Query: 408 ---RVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
+ RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNSMTDMLDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIIKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI-------AFNP-ALEYS 483
+W W+LPA Q + A P ALEY+
Sbjct: 564 VW----WTLPAEQLLPAEVLAQAGGPGALEYA 591
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +VL EN HSYP DWRTK PV+
Sbjct: 415 LVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVL 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P +A S+ D + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFVNITDIKAAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTTEHIIKLVEQHGSDVWWTLPAEQLL 574
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC++ R S L I VL+R API+PHLAEEV+ H+P
Sbjct: 800 SIVKDRLYCENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIP 850
>gi|297661948|ref|XP_002809485.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Pongo abelii]
Length = 1012
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/623 (42%), Positives = 380/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLTSLIDGSSPVSILVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + F G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTFSGVDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGPDQKADLYLEGKDQLGGWFQSSLLTSVATRKRAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVIHPDVVINGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVAIGPSMLNAARDDISKLRNTLRFLLGNVADFNPETDSIPINDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALIEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVIVRSFAPILPHLAEEVFQHIP 850
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/495 (43%), Positives = 310/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIH 148
Query: 61 YVPGWDCHGLPIELKAITSKDKL---LSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGRAAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K +K + L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLTSLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVASVASTLETTFETISTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 564 IW----WTLPPEQLL 574
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDIWWTLPPEQLL 574
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPKRRSCQTALIEILDVIVRSFAPILPHLAEEVFQHIP 850
>gi|195495398|ref|XP_002095250.1| GE22294 [Drosophila yakuba]
gi|194181351|gb|EDW94962.1| GE22294 [Drosophila yakuba]
Length = 938
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/628 (40%), Positives = 380/628 (60%), Gaps = 55/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +HIS S+Y++ LN P+ ++AL+WTTTPW+LP+NQ I +N
Sbjct: 214 TALAEAELEYDANHISPSVYVRFALN--PSSFDIQDKQIYALVWTTTPWTLPSNQAICYN 271
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + ++ N ++A L+E+ + Q ++V G+ L ++Y HPI+ E
Sbjct: 272 ASLEYVLVTLSDRNQDELYLMASALMEDFESNTQLKCEIVQHLSGESLSKLSYNHPIDIE 331
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q ++ A V SKGTGLVH APAHG +DFL++L +KIPV + +G Y+ +A L
Sbjct: 332 QSNMPFFEASHVQDSKGTGLVHTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTKEAPDFL 391
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 392 RGQSVLDQGNSLVLERIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 451
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
LE+V P +++KK L Q+ +RPYWCISRQR WGVPIPVFY D+ +++N
Sbjct: 452 ADALEQVEIYPKANADASKKALLTQLQKRPYWCISRQRAWGVPIPVFYSRDSGKVVLNST 511
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWS 760
I+H C L+ + G DFWW SVE+L+ + + ++ K DILDIWFDSG +WS
Sbjct: 512 LIEHLCNLLRQEGSIDFWWVKSVEELVPANILRELRCEAKDLVKGTDILDIWFDSGSTWS 571
Query: 761 HVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL KDK A +Y+EG DQ GWF SSLL S+A + +P++ +F+HGF VDEKG KMSKS+
Sbjct: 572 AVLGKDKIADLYLEGYDQFTGWFQSSLLMSIAARECSPYKALFVHGFTVDEKGYKMSKSL 631
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI S IT+ YG D LRWWVA+H ++ +
Sbjct: 632 GNVI-----------------------SPKQITK------KYGTDALRWWVASHGTQHMS 662
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQN 935
+ + +L + +++ K+R +LRYL GV+ + + I +++ ++L +L EF++
Sbjct: 663 ITVSDKLLQQAAENLSKVRGTLRYLKGVIGDKQSAEKLIPTSDKSFLNRFLLSQLVEFES 722
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ LY ++Y R + NF+ N++SA Y L+KDRLYC + + L+ TL + +
Sbjct: 723 EVEKLYNAYEYNRVVAYVQNFIANQVSAVYVHLIKDRLYCG--DDQEILAIRQTLTHCYQ 780
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L +++ P++P L EE +S+ + F
Sbjct: 781 QLCKSLWPVVPFLVEESWSYYDTTCAAF 808
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/399 (51%), Positives = 273/399 (68%), Gaps = 8/399 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
S Y QR A NGKP F+LHDGPPYANG H+GHAVNKILKDITLR + G++V+YV
Sbjct: 56 AVSYAYQEQRLAENGKPTFVLHDGPPYANGELHMGHAVNKILKDITLRQRVAHGQQVNYV 115
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NC 121
PGWDCHGLPIELKA TS + S +IRKK++ FALE I +QK EF SWG+LA+W+ N
Sbjct: 116 PGWDCHGLPIELKA-TSTAQNQSAQEIRKKSRAFALEAIKSQKEEFSSWGILANWQKDNI 174
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T +++ NQL FYNLY++ +YRDLKPVYWSPSSRTALAE+ELEY +H+S S+Y+
Sbjct: 175 YMTLQPDFIVNQLQMFYNLYEKGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVYV 234
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIV 237
+ LN P+ ++AL+WTTTPW+LP+NQ I +N +LEY + ++ N ++
Sbjct: 235 RFALN--PSSFDIQDKQIYALVWTTTPWTLPSNQAICYNASLEYVLVTLSDRNQDELYLM 292
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A L+E + Q E+V G+ L ++Y HPI+ EQ ++ A V SKGTGLV
Sbjct: 293 ASALMEDFESNTQLKCEIVQHLSGESLSKLSYNHPIDIEQSNMPFFEASHVQDSKGTGLV 352
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL++L +KIPV + +G Y+ +A L G ++L G VL + DV
Sbjct: 353 HTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTKEAPDFLRGQSVLDQGNSLVLERIAEDV 412
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 413 VHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 451
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 107/163 (65%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +G Y+ +A L G ++L +G VL + DV+ + +HSYP DWRTKKPVI++
Sbjct: 376 FVNEEGTYTKEAPDFLRGQSVLDQGNSLVLERIAEDVVHSSKLEHSYPIDWRTKKPVIIR 435
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A LE V P +++KK+L Q+ +RPYWCISRQR WGVPI
Sbjct: 436 ASEQWFINTEKLKSPAADALEQVEIYPKANADASKKALLTQLQKRPYWCISRQRAWGVPI 495
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PVFY D+ +++N I+H C L+ + G DFWW VE+L+
Sbjct: 496 PVFYSRDSGKVVLNSTLIEHLCNLLRQEGSIDFWWVKSVEELV 538
>gi|395531401|ref|XP_003767767.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Sarcophilus
harrisii]
Length = 998
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/630 (42%), Positives = 378/630 (60%), Gaps = 44/630 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P H+S SIY K L + P A +LEG++ + A+IWTT PW++PANQ +
Sbjct: 243 TALAEAELEYNPKHVSHSIYAKFPLLKPPPLLASVLEGSSPVSAIIWTTQPWTIPANQAV 302
Query: 475 AFNPALEYSVASV--KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P YS+ G I+A V ++ T+ +V+ F G L++ + +HPI
Sbjct: 303 CYMPESNYSIVKCTNSGEFYILAAEKVSSVATVLGTEFEVISTFLGADLENGSCVHPIIA 362
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ R LLPA V+ SKGTG+VH APAHG +D+++A ++P+ L+ G ++ AG
Sbjct: 363 D-RVSPLLPAQHVNLSKGTGMVHIAPAHGMEDYIVASRHELPMDCLVDEDGNFTEAAGSE 421
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
LE N L +G D V+ +++ ++L E+ HSYPYDWRTKKPVI+++S+QWF+ +
Sbjct: 422 LENKNALEEGTDTVIKMLQSTKNLLKEEDITHSYPYDWRTKKPVIIRSSKQWFVKIGNMT 481
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P S ++ D +RPYWCISRQRVWGVPIPVF+ D +++N
Sbjct: 482 ATAKESLKKVKFIPASTMNSMVDMTERRPYWCISRQRVWGVPIPVFHHKTKDEVLINSET 541
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
I H L+++HG D WW+L E+LL ++ DILDIWF+SG SW+
Sbjct: 542 IDHLVQLVEKHGSDIWWTLPPEKLLPQKVLSQLGDPDALEYVPGQDILDIWFESGTSWNC 601
Query: 762 VLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
VL D+ A +Y+EG DQI GWF SSLLTSVA + APFR + +HGF + +KG KMSKS+GN
Sbjct: 602 VLPDQRADLYLEGKDQIGGWFQSSLLTSVAARKKAPFRVLLVHGFTLSDKGEKMSKSLGN 661
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPTV 880
VIS I G Q K P YG D+LRWWVA +H + V
Sbjct: 662 VISPDVIINGG--------------------QDHSKDPPYGADILRWWVAESHIFSE--V 699
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
IG ILN+++D++ K+R++LR+LLG L + + T S+ +D YML L +F
Sbjct: 700 KIGSRILNAARDNIDKLRNTLRFLLGNLADFNPKTDSVPFEEMYIIDQYMLHLLQDFGKK 759
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++ + + R L F ++LS FYF+++KDRLYC+ N R S L I V
Sbjct: 760 VTDAYRQYDFGKVIRHLQAFYPSQLSNFYFSIIKDRLYCEKENDLKRRSCQTALAEILDV 819
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
++R +API+PHLAEEV+ H+P + S F
Sbjct: 820 MVRAIAPILPHLAEEVFQHIPYEKEPKSVF 849
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 271/397 (68%), Gaps = 13/397 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFS+LYSWQ E N + F LHDGPPYANG H+GHA+NKILKDIT R +++G +VH
Sbjct: 82 KCGFSKLYSWQ-EKRNVRENFCLHDGPPYANGEAHVGHALNKILKDITNRFQMMRGAKVH 140
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIELKA++ K + LSP++IRK A+ FA I QK+ F WG++ADW
Sbjct: 141 FVPGWDCHGLPIELKALSELGEKAQNLSPMEIRKTARAFAEAAIEKQKSAFIRWGIMADW 200
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+ NCY+TFDK+Y QL FY +Y +D IYR KPV+WSPS+RTALAE+ELEY P HVS
Sbjct: 201 D-NCYYTFDKKYEAQQLKMFYQMYTKDLIYRAYKPVFWSPSARTALAEAELEYNPKHVSH 259
Query: 178 SIYLKI---KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--KG 232
SIY K K + A +LEG++ + A+IWTT PW++PANQ + + P YS+ G
Sbjct: 260 SIYAKFPLLKPPPLLASVLEGSSPVSAIIWTTQPWTIPANQAVCYMPESNYSIVKCTNSG 319
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V S+ T+ EV+ F G L++ + +HPI + R LLPA V+ SK
Sbjct: 320 EFYILAAEKVSSVATVLGTEFEVISTFLGADLENGSCVHPIIAD-RVSPLLPAQHVNLSK 378
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG+VH APAHG +D+++A ++P+ L+ G ++ AG LE N L +G D V+ +
Sbjct: 379 GTGMVHIAPAHGMEDYIVASRHELPMDCLVDEDGNFTEAAGSELENKNALEEGTDTVIKM 438
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFI 387
++ ++L E+ HSYPYDWRTKKPVI+++S+QWF+
Sbjct: 439 LQSTKNLLKEEDITHSYPYDWRTKKPVIIRSSKQWFV 475
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AG LE N L EG D V+ +++ ++L E+ HSYPYDWRTKKPVI
Sbjct: 407 LVDEDGNFTEAAGSELENKNALEEGTDTVIKMLQSTKNLLKEEDITHSYPYDWRTKKPVI 466
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
+++S+QWF+ + A L+ V F+P S S+ D +RPYWCISRQRVWGVPIPV
Sbjct: 467 IRSSKQWFVKIGNMTATAKESLKKVKFIPASTMNSMVDMTERRPYWCISRQRVWGVPIPV 526
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D +++N I H L+++HG D WW+LP E+LL
Sbjct: 527 FHHKTKDEVLINSETIDHLVQLVEKHGSDIWWTLPPEKLL 566
>gi|397471288|ref|XP_003807228.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Pan paniscus]
Length = 1012
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/623 (42%), Positives = 379/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V + T +T + + G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVASAASTLETTFETISTLSGIDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 TAAKELLKKVKFIPGSALNGMVEMMDKRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVMVRSFAPILPHLAEEVFQHIP 850
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 309/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IRKKA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S T +T E + G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVASAASTLETTFETISTLSGIDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDKRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 564 IW----WTLPPEQLL 574
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDKRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDIWWTLPPEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPKRRSCQTALVEILDVMVRSFAPILPHLAEEVFQHIP 850
>gi|74184865|dbj|BAE39055.1| unnamed protein product [Mus musculus]
Length = 1012
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/622 (42%), Positives = 374/622 (60%), Gaps = 44/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY++ L + P L + ++ + L+WTT PW++PANQ I
Sbjct: 251 TALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAI 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A+ + + +T DVV F G L+ T HP+
Sbjct: 311 CYMPEAKYAVVKCSASGHLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK
Sbjct: 430 LQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L+ V F+P +A ++ D + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 AAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
+H L+++HG D WW+L EQLL + DILDIWFDSG SWS
Sbjct: 550 TEHIIKLVEQHGSDVWWTLPAEQLLPAEVLAQAGGPGALEYAPGQDILDIWFDSGTSWSC 609
Query: 762 VLKD--KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+D + A +Y+EG DQ+ GWF SSLLTSVA + APFR V +HGF + EKG KMSKS+
Sbjct: 610 VLQDTQQRADLYLEGKDQLGGWFQSSLLTSVATRSKAPFRTVMVHGFTLGEKGEKMSKSL 669
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI+ I G K K P YG D+LRWW+ A ++
Sbjct: 670 GNVINPDTIISGGKD--------------------HSKEPPYGADILRWWI-AESNVFTE 708
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQN 935
V IG ++L++++DD+ K+R++LR+LLG L + T S+ + YV D YML + +F
Sbjct: 709 VTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVPVKNMYVIDQYMLHLIQDFAT 768
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++ + + R+L F ELS+FYF++VKDRLYC++ R S L I
Sbjct: 769 KITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYCENEKDPKRRSYQTALAEILD 828
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
VL+R API+PHLAEEV+ H+P
Sbjct: 829 VLVRAFAPILPHLAEEVFQHIP 850
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/512 (43%), Positives = 312/512 (60%), Gaps = 39/512 (7%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMRGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE K ++ + LS ++IR+KA++FA I QK+ F WGV+ADW
Sbjct: 149 FVPGWDCHGLPIETKVLSELGVDAQSLSAMEIREKARSFAQAAIEKQKSAFVRWGVMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y++ +YR KPVYWSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVPAH---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY++ L + P L + ++ + L+WTT PW++PANQ I + P +Y+V S G
Sbjct: 268 SIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAICYMPEAKYAVVKCSASG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A+ + + +T +VV F G L+ T HP+ ++ LLPA V+ +K
Sbjct: 328 HLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVS-PLLPATHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVGNILG-- 407
++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK A KTV I G
Sbjct: 447 LQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIPGAA 506
Query: 408 ---RVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
+ RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNSMTDMLDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIIKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI-------AFNP-ALEYS 483
+W W+LPA Q + A P ALEY+
Sbjct: 564 VW----WTLPAEQLLPAEVLAQAGGPGALEYA 591
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +VL EN HSYP DWRTK PV+
Sbjct: 415 LVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVL 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P +A S+ D + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFVNITDIKAAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTTEHIIKLVEQHGSDVWWTLPAEQLL 574
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC++ R S L I VL+R API+PHLAEEV+ H+P
Sbjct: 800 SIVKDRLYCENEKDPKRRSYQTALAEILDVLVRAFAPILPHLAEEVFQHIP 850
>gi|291402374|ref|XP_002717549.1| PREDICTED: mitochondrial isoleucine tRNA synthetase [Oryctolagus
cuniculus]
Length = 1012
Score = 488 bits (1256), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/623 (42%), Positives = 381/623 (61%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + P A L++ ++ + L WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPPPKLASLIDTSSPVSFLAWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y++ S G I+A+ V ++ T +T +++ FPG L++ + HP+
Sbjct: 311 CYMPESKYALVKCSKSGDLYILAEEKVASVASTLETTFEIISTFPGGDLENGSCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A K+PV L+ G ++ AGP
Sbjct: 371 DKVS-PLLPANHVTMAKGTGLVHTAPAHGLEDYSVASQHKLPVDCLVDEDGIFTEGAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLDEGTDAVIKMLQTTKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINISDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ + ++N
Sbjct: 490 TTAKELLKTVKFIPGSALNAMIEMMDRRPYWCISRQRVWGVPIPVFHHKTKEEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSN--------DILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V N DILDIWFDSG SWS
Sbjct: 550 IEHIIKLVEQHGSDIWWTLPPEQLL-PKEVLSQVGGPNALEYLPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLL S A + APF+ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGTDQRADLYLEGKDQLGGWFQSSLLISAAARKKAPFKTVVVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI+ + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVINPDIVINGG--------------------QDQNKEPPYGADVLRWWV-AESNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQ 934
V IG + L++++DD+ K+R++LR+LLG L + T S+ + YV D YML L +
Sbjct: 708 EVTIGPSALSAARDDISKLRNTLRFLLGNLAGFNPETDSVPVDNMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ + Y ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 SKISESYKQYDFGKVIRLLQAFYTRELSNFYFSIIKDRLYCEDENDPKRRSCQTALAKIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVIVRSFAPILPHLAEEVFQHIP 850
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 313/495 (63%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGF+ELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G +VH
Sbjct: 90 KCGFAELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKVH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS L+IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGGKSQNLSALEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+T+D +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTYDAKYEAKQLRIFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + P A L++ ++ + L WTT PW++PANQ + + P +Y++ S G
Sbjct: 268 SIYVKFPLLKPPPKLASLIDTSSPVSFLAWTTQPWTIPANQAVCYMPESKYALVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A+ V S+ T +T E++ FPG L++ + HP+ ++ LLPA V+ +K
Sbjct: 328 DLYILAEEKVASVASTLETTFEIISTFPGGDLENGSCSHPLIPDKVS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A K+PV L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGLEDYSVASQHKLPVDCLVDEDGIFTEGAGPELQNKAVLDEGTDAVIKM 446
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVGNILGR- 408
++ +L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + KTV I G
Sbjct: 447 LQTTKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINISDIKTTAKELLKTVKFIPGSA 506
Query: 409 ----VGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
+ + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNAMIEMMDRRPYWCISRQRVWGVPIPVFHHKTKEEYL---INSQTIEHIIKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 564 IW----WTLPPEQLL 574
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGIFTEGAGPELQNKAVLDEGTDAVIKMLQTTKHLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA ++ + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINISDIKTTAKELLKTVKFIPGSALNAMIEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ + ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKEEYLINSQTIEHIIKLVEQHGSDIWWTLPPEQLL 574
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEDENDPKRRSCQTALAKILDVIVRSFAPILPHLAEEVFQHIP 850
>gi|45946341|gb|AAH47880.3| IARS2 protein [Homo sapiens]
Length = 889
Score = 488 bits (1255), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/623 (42%), Positives = 379/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 128 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 187
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 188 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 247
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 248 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 306
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 307 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 366
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 367 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 426
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 427 TEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 485
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 486 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 545
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 546 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 584
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 585 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 644
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 645 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 704
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 705 DVIVRSFAPILPHLAEEVFQHIP 727
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/460 (41%), Positives = 282/460 (61%), Gaps = 30/460 (6%)
Query: 36 IGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS---KDKLLSPLDIRKK 92
+GHA+NKILKDI R +++ G ++H+VPGWDCHGLPIE+K ++ + + LS ++IRKK
Sbjct: 1 VGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKK 60
Query: 93 AKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKP 152
A++FA I QK+ F WG++ADW +NCY+TFD +Y QL FY +Y + +YR KP
Sbjct: 61 ARSFAKAAIEKQKSAFIRWGIMADW-NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKP 119
Query: 153 VYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPW 209
V+WSPSSRTALAE+ELEY P+HVS+SIY+K L + A L++G++ + L+WTT PW
Sbjct: 120 VFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPW 179
Query: 210 SLPANQFIAFNPALEYSV--ASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDI 267
++PAN+ + + P +Y+V S G ++A V S+ T +T E + G L++
Sbjct: 180 TIPANEAVCYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENG 239
Query: 268 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 327
T HP+ ++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G
Sbjct: 240 TCSHPLIPDKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGV 298
Query: 328 YSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQW 385
++ AGP L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QW
Sbjct: 299 FTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQW 358
Query: 386 FIDTERIKPEAL-VCKTV----GNIL-GRVGITHDRPGTALAESELEYKP----DHISKS 435
FI+ IK A + K V G+ L G V + RP ++ + P H +K
Sbjct: 359 FINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKD 418
Query: 436 IYLKIKLN-QVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
YL +N Q H+++ + IW W+LP Q +
Sbjct: 419 EYL---INSQTTEHIVKLVEQHGSDIW----WTLPPEQLL 451
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 292 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 351
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 352 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 411
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 412 FHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPEQLL 451
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 677 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 727
>gi|114325408|gb|AAH40376.2| IARS2 protein [Homo sapiens]
Length = 957
Score = 488 bits (1255), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/623 (42%), Positives = 379/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 196 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 255
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 256 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 315
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 316 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 374
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 375 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 434
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 435 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 494
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 495 TEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 553
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 554 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 613
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 614 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 652
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 653 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 712
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 713 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 772
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 773 DVIVRSFAPILPHLAEEVFQHIP 795
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 310/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 35 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIH 93
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IRKKA++FA I QK+ F WG++ADW
Sbjct: 94 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKKARSFAKAAIEKQKSAFIRWGIMADW 153
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 154 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 212
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 213 SIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 272
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + G L++ T HP+ ++ LLPA V+ +K
Sbjct: 273 DLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 331
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 332 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 391
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 392 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSA 451
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 452 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIVKLVEQHGSD 508
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 509 IW----WTLPPEQLL 519
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 360 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 419
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 420 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 479
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 480 FHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPEQLL 519
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 745 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 795
>gi|26341092|dbj|BAC34208.1| unnamed protein product [Mus musculus]
Length = 1012
Score = 488 bits (1255), Expect = e-134, Method: Compositional matrix adjust.
Identities = 262/622 (42%), Positives = 374/622 (60%), Gaps = 44/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY++ L + P L + ++ + L+WTT PW++PANQ I
Sbjct: 251 TALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAI 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A+ + + +T DVV F G L+ T HP+
Sbjct: 311 CYMPEAKYAVVKCSASGHLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK
Sbjct: 430 LQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L+ V F+P +A ++ D + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 AAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
+H L+++HG D WW+L EQLL + DILDIWFDSG SWS
Sbjct: 550 TEHIIKLVEQHGSDVWWTLPAEQLLPAEVLAQAGGPGALEYAPGQDILDIWFDSGTSWSC 609
Query: 762 VLKD--KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+D + A +Y+EG DQ+ GWF SSLLTSVA + APFR V +HGF + EKG KMSKS+
Sbjct: 610 VLQDTQQRADLYLEGKDQLGGWFQSSLLTSVATRSKAPFRTVMVHGFTLGEKGEKMSKSL 669
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI+ I G K K P YG D+LRWW+ A ++
Sbjct: 670 GNVINPDTIISGGKD--------------------HSKEPPYGADILRWWI-AESNVFTE 708
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQN 935
+ IG ++L++++DD+ K+R++LR+LLG L + T S+ + YV D YML + +F
Sbjct: 709 MTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVPVKNMYVIDQYMLHLIQDFAT 768
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++ + + R+L F ELS+FYF++VKDRLYC++ R S L I
Sbjct: 769 KITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYCENEKDPKRRSCQTALAEILD 828
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
VL+R API+PHLAEEV+ H+P
Sbjct: 829 VLVRAFAPILPHLAEEVFQHIP 850
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/512 (43%), Positives = 312/512 (60%), Gaps = 39/512 (7%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMRGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE K ++ + LS ++IR+KA++FA I QK+ F WGV+ADW
Sbjct: 149 FVPGWDCHGLPIETKVLSELGVDAQSLSAMEIREKARSFAQAAIEKQKSAFVRWGVMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y++ +YR KPVYWSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVPAH---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY++ L + P L + ++ + L+WTT PW++PANQ I + P +Y+V S G
Sbjct: 268 SIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAICYMPEAKYAVVKCSASG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A+ + + +T +VV F G L+ T HP+ ++ LLPA V+ +K
Sbjct: 328 HLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVS-PLLPATHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVGNILG-- 407
++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK A KTV I G
Sbjct: 447 LQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIPGAA 506
Query: 408 ---RVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
+ RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNSMTDMLDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIIKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI-------AFNP-ALEYS 483
+W W+LPA Q + A P ALEY+
Sbjct: 564 VW----WTLPAEQLLPAEVLAQAGGPGALEYA 591
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +VL EN HSYP DWRTK PV+
Sbjct: 415 LVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVL 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P +A S+ D + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFVNITDIKAAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTTEHIIKLVEQHGSDVWWTLPAEQLL 574
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC++ R S L I VL+R API+PHLAEEV+ H+P
Sbjct: 800 SIVKDRLYCENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIP 850
>gi|45945660|gb|AAH10218.2| IARS2 protein [Homo sapiens]
Length = 773
Score = 488 bits (1255), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/623 (42%), Positives = 379/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 12 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 71
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 72 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 131
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 132 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 190
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 191 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 250
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 251 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 310
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 311 TEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 369
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 370 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 429
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 430 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 468
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 469 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 528
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 529 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 588
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 589 DVIVRSFAPILPHLAEEVFQHIP 611
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 198/342 (57%), Gaps = 26/342 (7%)
Query: 151 KPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP---AHLLEGATDLHALIWTTT 207
KPV+WSPSSRTALAE+ELEY P+HVS+SIY+K L + A L++G++ + L+WTT
Sbjct: 2 KPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQ 61
Query: 208 PWSLPANQFIAFNPALEYSV--ASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQ 265
PW++PAN+ + + P +Y+V S G ++A V S+ T +T E + G L+
Sbjct: 62 PWTIPANEAVCYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLE 121
Query: 266 DITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 325
+ T HP+ ++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+
Sbjct: 122 NGTCSHPLIPDKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDED 180
Query: 326 GKYSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQ 383
G ++ AGP L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+
Sbjct: 181 GVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASK 240
Query: 384 QWFIDTERIKPEAL-VCKTV----GNIL-GRVGITHDRPGTALAESELEYKP----DHIS 433
QWFI+ IK A + K V G+ L G V + RP ++ + P H +
Sbjct: 241 QWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKT 300
Query: 434 KSIYLKIKLN-QVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
K YL +N Q H+++ + IW W+LP Q +
Sbjct: 301 KDEYL---INSQTTEHIVKLVEQHGSDIW----WTLPPEQLL 335
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 176 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 235
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 236 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 295
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 296 FHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPEQLL 335
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 561 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 611
>gi|158256300|dbj|BAF84121.1| unnamed protein product [Homo sapiens]
Length = 940
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/623 (42%), Positives = 379/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 179 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 238
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 239 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 298
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 299 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 357
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 358 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 417
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 418 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 478 TEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 536
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 537 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 596
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 597 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 635
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 636 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 695
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 696 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 755
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 756 DVIVRSFAPILPHLAEEVFQHIP 778
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 309/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 18 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIH 76
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IRKKA +FA I QK+ F WG++ADW
Sbjct: 77 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKKAGSFAKAAIEKQKSAFIRWGIMADW 136
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 137 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 195
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 196 SIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 255
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + G L++ T HP+ ++ LLPA V+ +K
Sbjct: 256 DLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 314
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 315 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 374
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 375 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSA 434
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 435 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIVKLVEQHGSD 491
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 492 IW----WTLPPEQLL 502
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 343 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 402
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 403 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 462
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 463 FHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPEQLL 502
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 728 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 778
>gi|7678804|dbj|BAA95147.1| mitochondrial isoleucine tRNA synthetase [Homo sapiens]
Length = 993
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/623 (42%), Positives = 379/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 232 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 291
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 292 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 351
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 352 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 410
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 411 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 470
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 471 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 530
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 531 TEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 589
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 590 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 649
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 650 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 688
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 689 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 748
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 749 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 808
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 809 DVIVRSFAPILPHLAEEVFQHIP 831
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 311/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 71 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIH 129
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IRKKA++FA I QK+ F WG++ADW
Sbjct: 130 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKKARSFAKAAIEKQKSAFIRWGIMADW 189
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 190 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 248
Query: 178 SIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K +K + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 249 SIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 308
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + G L++ T HP+ ++ LLPA V+ +K
Sbjct: 309 DLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 367
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 368 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 427
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 428 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSA 487
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 488 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIVKLVEQHGSD 544
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 545 IW----WTLPPEQLL 555
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 396 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 455
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 456 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 515
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 516 FHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPEQLL 555
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 781 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 831
>gi|46852147|ref|NP_060530.3| isoleucine--tRNA ligase, mitochondrial precursor [Homo sapiens]
gi|94730583|sp|Q9NSE4.2|SYIM_HUMAN RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
Precursor
gi|33112162|gb|AAP94033.1| isoleucine tRNA synthetase [Homo sapiens]
gi|119613711|gb|EAW93305.1| isoleucine-tRNA synthetase 2, mitochondrial [Homo sapiens]
gi|187952611|gb|AAI37439.1| Isoleucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
Length = 1012
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/623 (42%), Positives = 379/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 TEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 708 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 768 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 828 DVIVRSFAPILPHLAEEVFQHIP 850
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 311/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IRKKA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K +K + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ T +T E + G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
IW W+LP Q +
Sbjct: 564 IW----WTLPPEQLL 574
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 800 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 850
>gi|195590645|ref|XP_002085055.1| GD14596 [Drosophila simulans]
gi|194197064|gb|EDX10640.1| GD14596 [Drosophila simulans]
Length = 938
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/629 (41%), Positives = 379/629 (60%), Gaps = 57/629 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +HIS S+Y++ LN P ++AL+WTTTPW+LP+NQ I +N
Sbjct: 214 TALAEAELEYDANHISPSVYVRFALN--PNSFDIQDKQIYALVWTTTPWTLPSNQAICYN 271
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + + N ++A L+ + + Q ++V + L ++Y HPI+KE
Sbjct: 272 ASLEYVLVRLSDRNQDELYLMASALMADFEANTQLKCEIVQHLSRESLSKLSYNHPIDKE 331
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q +L A V SKGTGLVH APAHG +DFL++L +KIPV + +G Y+ +A L
Sbjct: 332 QSNLPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTTEAPDFL 391
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G +L + DV+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 392 RGKSVLDQGNSLILDRIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 451
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
LE+V P E++KK L Q+ +RPYWCISRQR WGVPIPV Y ++ +++N A
Sbjct: 452 ADALEQVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPIPVLYSRESGKVVLNTA 511
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWS 760
I+H C L+ + G DFWW SVE+L+ + ++ K DILDIWFDSG +WS
Sbjct: 512 LIEHLCNLLRKEGSIDFWWVKSVEELVPEHLLRELHHEAKDLVKGTDILDIWFDSGSTWS 571
Query: 761 HVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL KDK A +Y+EG DQ GWF SSLL S+A + AP++ +F+HGF VDEKG KMSKS+
Sbjct: 572 AVLGKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGFTVDEKGYKMSKSL 631
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI S IT+ YG D LRWWVA+H ++ +
Sbjct: 632 GNVI-----------------------SPKQITK------KYGTDALRWWVASHGTQHMS 662
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR-----YVDVYMLKRLCEFQ 934
+ + +L + +++ KIR +LRYL GV+ +S +++R Y++ Y+L +L EF+
Sbjct: 663 ITVSDKLLQQAAENLSKIRGTLRYLKGVI-GEKQSGENLTRTSDKSYLNRYLLSQLVEFE 721
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ ++ LY ++Y R + NF+ N++SA Y L+KDRLYC + L+ TL + +
Sbjct: 722 SEVEKLYQAYEYNRVVACVQNFIANQVSAVYVHLIKDRLYCG--DDLELLAIRQTLTHCY 779
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L +++ PI+P L EE +S+ + G F
Sbjct: 780 QQLCKSLWPIVPFLVEESWSYYDTTGGAF 808
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/399 (51%), Positives = 270/399 (67%), Gaps = 8/399 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
S Y QR A GKP F+LHDGPPYANG H+GHAVNKILKDITLR + G++V+Y+
Sbjct: 56 AVSYAYQEQRLAEKGKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQQVNYI 115
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NC 121
PGWDCHGLPIELKA TS S +IR+K++ FALETI +QK EF SWG+LA+W+ N
Sbjct: 116 PGWDCHGLPIELKA-TSTAPGQSAQEIRQKSRAFALETIKSQKEEFSSWGILANWQKDNI 174
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF E++ NQL FYNLY++ +YRDLKPVYWSPSSRTALAE+ELEY +H+S S+Y+
Sbjct: 175 YMTFQPEFIVNQLQMFYNLYEKGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVYV 234
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIV 237
+ LN P ++AL+WTTTPW+LP+NQ I +N +LEY + + N ++
Sbjct: 235 RFALN--PNSFDIQDKQIYALVWTTTPWTLPSNQAICYNASLEYVLVRLSDRNQDELYLM 292
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A L+ + Q E+V + L ++Y HPI+KEQ +L A V SKGTGLV
Sbjct: 293 ASALMADFEANTQLKCEIVQHLSRESLSKLSYNHPIDKEQSNLPFFDASHVQDSKGTGLV 352
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL++L +KIPV + +G Y+ +A L G ++L G +L + DV
Sbjct: 353 HTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTTEAPDFLRGKSVLDQGNSLILDRIAEDV 412
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 413 VHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 451
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 107/163 (65%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +G Y+ +A L G ++L +G +L + DV+ + +HSYP DWRTKKPVI++
Sbjct: 376 FVNEEGTYTTEAPDFLRGKSVLDQGNSLILDRIAEDVVHSSKLEHSYPIDWRTKKPVIIR 435
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A LE V P E++KK+L Q+ +RPYWCISRQR WGVPI
Sbjct: 436 ASEQWFINTEKLKSPAADALEQVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPI 495
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PV Y ++ +++N A I+H C L+ + G DFWW VE+L+
Sbjct: 496 PVLYSRESGKVVLNTALIEHLCNLLRKEGSIDFWWVKSVEELV 538
>gi|7022287|dbj|BAA91544.1| unnamed protein product [Homo sapiens]
Length = 764
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/623 (42%), Positives = 379/623 (60%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 110 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAV 169
Query: 475 AFNPALEYSVA--SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A V ++ T +T + + G L++ T HP+
Sbjct: 170 CYMPESKYAVVKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIP 229
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 230 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 288
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 289 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIK 348
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 349 TAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 408
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 409 TEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 467
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 468 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKRAPYKTVIVHGFTLGEKGEKMSKS 527
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 528 LGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADSNVFT 566
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 567 EVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 626
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 627 NKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEIL 686
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 687 DVIVRSFAPILPHLAEEVFQHIP 709
Score = 310 bits (793), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 267/442 (60%), Gaps = 30/442 (6%)
Query: 54 LQGKRVHYVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFES 110
+ G ++H+VPGWDCHGLPIE+K ++ + + LS ++IRKKA++FA I QK+ F
Sbjct: 1 MNGSKIHFVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKKARSFAKAAIEKQKSAFIR 60
Query: 111 WGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEY 170
WG++ADW +NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY
Sbjct: 61 WGIMADW-NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEY 119
Query: 171 KPDHVSKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV 227
P+HVS+SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V
Sbjct: 120 NPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSILVWTTQPWTIPANEAVCYMPESKYAV 179
Query: 228 --ASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPA 285
S G ++A V S+ T +T E + G L++ T HP+ ++ LLPA
Sbjct: 180 VKCSKSGDLYVLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKAS-PLLPA 238
Query: 286 GFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDG 345
V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G
Sbjct: 239 NHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEG 298
Query: 346 KDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV 402
D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V
Sbjct: 299 TDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKV 358
Query: 403 ----GNIL-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEG 452
G+ L G V + RP ++ + P H +K YL +N Q H+++
Sbjct: 359 KFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIVKL 415
Query: 453 ATDLHALIWTTTPWSLPANQFI 474
+ IW W+LP Q +
Sbjct: 416 VEQHGSDIW----WTLPPEQLL 433
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 274 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 333
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 334 IRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 393
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 394 FHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPEQLL 433
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 659 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 709
>gi|348520728|ref|XP_003447879.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Oreochromis
niloticus]
Length = 1014
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/623 (41%), Positives = 371/623 (59%), Gaps = 45/623 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLL--EGATDLHALIWTTTPWSLPANQFI 474
GTALAE+ELEY P+H+S++IY L +P + +G + L+WTT PW++PANQ +
Sbjct: 252 GTALAEAELEYNPEHVSRAIYATFPLVTLPPKIASQKGLESVSVLVWTTQPWTIPANQAV 311
Query: 475 AFNPALEYSVASV--KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +YSV +VA ++ TD+ V F G L+ HP
Sbjct: 312 CYMPNAQYSVVKRVDNSEKFLVATERTASIAALLGTDLQTVGTFTGSLLEGGICKHPTIP 371
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+++ + LLPA V+ KGTGLVH APAHG +D+ +A K+PV ++ GK++ AG
Sbjct: 372 DKQ-VPLLPANHVTMVKGTGLVHTAPAHGMEDYSVASQFKLPVECMVDEDGKFNELAGAE 430
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ L+++ +G D+V+ +++ +L E HSYPYDWRTK+PV+++ S+QWFI+TE +K
Sbjct: 431 LQKLSVVTEGNDKVISMLKQCNALLKEEQCVHSYPYDWRTKQPVVIRPSKQWFINTETLK 490
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
+A L++V +PESA+ +L + +R YWCISRQR WGVPIPVFY ++ ++N+
Sbjct: 491 DKAKEALQKVRVLPESARSSLLTMLDRRTYWCISRQRSWGVPIPVFYHKESGEALINKYT 550
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-------NTSDVNSNVTKSNDILDIWFDSGISWSH 761
+ H L E G D WW L +E LL + + S+ + D+LDIWFDSG SW+
Sbjct: 551 VSHIAQLFKEKGSDCWWELPIETLLPPEVLKKSKAGAVSDYVRGEDVLDIWFDSGASWAA 610
Query: 762 VLK---DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
VL+ D A VY+EG DQI GWF SSLLTSVA+++ AP++++ +HGF V EKG KMSKS
Sbjct: 611 VLEAESDSRADVYVEGKDQIGGWFQSSLLTSVAVRNKAPYKSLVVHGFAVSEKGEKMSKS 670
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
VGNV+ + G K PAYG DVLRWWV A ++
Sbjct: 671 VGNVVDPDVVINGGK---------------------GPTEPAYGADVLRWWV-AESNVFS 708
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LNS++D + K+R++L++LLG L ++ Y+D YML L E+
Sbjct: 709 EVQIGPSVLNSARDSISKLRNTLKFLLGNLQGFDPRLQAVDPKQMHYIDQYMLHLLREYS 768
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y EF R RVL F+ ELS+FYF+++KDRLYCD+ + R S L I
Sbjct: 769 IKVTDAYSEFDAGRVIRVLQAFITRELSSFYFSIIKDRLYCDAEDSLGRRSCQTVLEEIL 828
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
+ R++API+PH+AEEVY H P
Sbjct: 829 DGVTRSIAPILPHMAEEVYLHAP 851
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/403 (47%), Positives = 266/403 (66%), Gaps = 10/403 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
ECGF++LYSWQRE K +F LHDGPPYANG PH+GHA+NKILKDI R +L+G++VH
Sbjct: 94 ECGFADLYSWQRER-KAKNKFCLHDGPPYANGDPHVGHALNKILKDIRNRFEMLRGRQVH 152
Query: 61 YVPGWDCHGLPIELKAITS-KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
Y+PGWDCHGLPIELKA+ LSPL IR+KA+ FA I QKA F+ WGV+ADW+
Sbjct: 153 YIPGWDCHGLPIELKALGDLGTSGLSPLQIRQKAREFAEGAIARQKAAFQRWGVMADWDQ 212
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
CY+TFD Y QL F ++ + IY+D KPV+WSPSS TALAE+ELEY P+HVS++I
Sbjct: 213 -CYYTFDGTYEAAQLKVFQEMHSKGLIYQDYKPVFWSPSSGTALAEAELEYNPEHVSRAI 271
Query: 180 YLKIKLNQVPAHLL--EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--KGANV 235
Y L +P + +G + L+WTT PW++PANQ + + P +YSV
Sbjct: 272 YATFPLVTLPPKIASQKGLESVSVLVWTTQPWTIPANQAVCYMPNAQYSVVKRVDNSEKF 331
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+VA S+ TD++ V F G L+ HP +++ + LLPA V+ KGTG
Sbjct: 332 LVATERTASIAALLGTDLQTVGTFTGSLLEGGICKHPTIPDKQ-VPLLPANHVTMVKGTG 390
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH APAHG +D+ +A K+PV ++ GK++ AG L+ L+++ +G D+V+ +++
Sbjct: 391 LVHTAPAHGMEDYSVASQFKLPVECMVDEDGKFNELAGAELQKLSVVTEGNDKVISMLKQ 450
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+L E HSYPYDWRTK+PV+++ S+QWFI+TE +K +A
Sbjct: 451 CNALLKEEQCVHSYPYDWRTKQPVVIRPSKQWFINTETLKDKA 493
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
++ GK++ AG L+ L+++ EG D+V+ +++ +L E HSYPYDWRTK+PV+
Sbjct: 416 MVDEDGKFNELAGAELQKLSVVTEGNDKVISMLKQCNALLKEEQCVHSYPYDWRTKQPVV 475
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++ S+QWFI+TE +K +A L+ V +PESA+ SL + +R YWCISRQR WGVPIPV
Sbjct: 476 IRPSKQWFINTETLKDKAKEALQKVRVLPESARSSLLTMLDRRTYWCISRQRSWGVPIPV 535
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY ++ ++N+ + H L E G D WW LP+E LL
Sbjct: 536 FYHKESGEALINKYTVSHIAQLFKEKGSDCWWELPIETLL 575
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYCD+ + R S L I + R++API+PH+AEEVY H P
Sbjct: 801 SIIKDRLYCDAEDSLGRRSCQTVLEEILDGVTRSIAPILPHMAEEVYLHAP 851
>gi|195160211|ref|XP_002020969.1| GL25089 [Drosophila persimilis]
gi|194118082|gb|EDW40125.1| GL25089 [Drosophila persimilis]
Length = 949
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/625 (41%), Positives = 378/625 (60%), Gaps = 60/625 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +HIS S+Y++ LN + + +AL+WTTTPW+LP+NQ I FN
Sbjct: 219 TALAEAELEYDANHISPSVYVRFALNPSGLEVETKGSQTYALVWTTTPWTLPSNQAICFN 278
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + + N ++A L+ + + Q +VV PG L +TY HPI+KE
Sbjct: 279 GSLEYVLVRLLDRNPSELYLMASALLSAFEASTQLKCEVVQTLPGSSLSTLTYKHPIDKE 338
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q L A V SKGTGLVH APAHG +DFL++L +KIPV ++ G Y+ +A L
Sbjct: 339 QTHLPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSLDKKIPVKCMVNEAGAYTMEAPSFL 398
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ + +HSYP DWRTK+PVI++AS+QWFI+T+R+K A
Sbjct: 399 RGQSVLEQGNPLVLQHIAEDVIHSAKLEHSYPIDWRTKQPVIIRASEQWFINTDRLKSRA 458
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
A LE+V+ P E++K+ + Q+ +RPYWCISRQR WGVPIPV Y + +++N A
Sbjct: 459 AAALEQVDVYPRTNAEASKRAMLTQLQKRPYWCISRQRAWGVPIPVLYSRKSGQVVLNAA 518
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLN---TSDVN---SNVTKSNDILDIWFDSGISWS 760
I+H C+L+ G DFWWS S+E LL +D+ ++ K +DILDIWFDSG +WS
Sbjct: 519 LIEHLCSLLRSQGSMDFWWSRSLEDLLPPQIAADLGYEVKDLVKGSDILDIWFDSGSTWS 578
Query: 761 HVLK-DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VLK ++ A +Y+EG DQ GWF SSLLTS+A + AP++ +F+HGF VDEKG KMSKS+
Sbjct: 579 AVLKKEQVADLYLEGYDQFTGWFQSSLLTSIAARDCAPYKALFVHGFTVDEKGHKMSKSL 638
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI S IT+ YG D LRWWVA+H ++ +
Sbjct: 639 GNVI-----------------------SPKQITK------KYGTDALRWWVASHGTQHTS 669
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVL-HNHSESTGSISR------YVDVYMLKRLCE 932
+ + +L + +++ K+R +LRYL GV+ E + + +++ Y+L L +
Sbjct: 670 ITVSDKLLQKATENLSKVRGTLRYLKGVIGEKQREGREELEQPILDASFLNKYLLSNLLD 729
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEAR--LSGLHTL 990
F++ ++ LY ++Y R + NF+ N++S+ Y L+KDRLYC G+ R L+ TL
Sbjct: 730 FESEIEKLYNAYEYNRVVACIQNFIANQVSSIYVHLIKDRLYC----GDDRELLAIRQTL 785
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSH 1015
+ + L +++ PI P L EE +S+
Sbjct: 786 THCYRQLCKSLWPIAPFLVEESWSY 810
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/384 (52%), Positives = 268/384 (69%), Gaps = 6/384 (1%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI 77
KP F+LHDGPPYANG H+GHAVNKILKDITLR + +G++V+Y+PGWDCHGLPIELKA
Sbjct: 76 KPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVTRGQKVNYIPGWDCHGLPIELKA- 134
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NCYHTFDKEYVKNQLCQ 136
TS + S +IR+K++ FALE I +QK EF SWG+LA+W+ N Y TF E+++NQL
Sbjct: 135 TSAAQGQSAAEIRQKSRAFALEAIQSQKEEFSSWGILANWQKDNIYTTFHPEFIENQLQM 194
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F+NLY++ +YRDLKPVYWSPSSRTALAE+ELEY +H+S S+Y++ LN +
Sbjct: 195 FHNLYERGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVYVRFALNPSGLEVETKG 254
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVESLKWTFQTD 252
+ +AL+WTTTPW+LP+NQ I FN +LEY + + N ++A L+ + + + Q
Sbjct: 255 SQTYALVWTTTPWTLPSNQAICFNGSLEYVLVRLLDRNPSELYLMASALLSAFEASTQLK 314
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
EVV PG L +TY HPI+KEQ L A V SKGTGLVH APAHG +DFL++L
Sbjct: 315 CEVVQTLPGSSLSTLTYKHPIDKEQTHLPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSL 374
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWR 372
+KIPV ++ G Y+ +A L G ++L G VL + DV+ + +HSYP DWR
Sbjct: 375 DKKIPVKCMVNEAGAYTMEAPSFLRGQSVLEQGNPLVLQHIAEDVIHSAKLEHSYPIDWR 434
Query: 373 TKKPVILKASQQWFIDTERIKPEA 396
TK+PVI++AS+QWFI+T+R+K A
Sbjct: 435 TKQPVIIRASEQWFINTDRLKSRA 458
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 108/163 (66%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
++ G Y+ +A L G ++L +G VL + DV+ + +HSYP DWRTK+PVI++
Sbjct: 383 MVNEAGAYTMEAPSFLRGQSVLEQGNPLVLQHIAEDVIHSAKLEHSYPIDWRTKQPVIIR 442
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+T+R+K A A LE V+ P E++K+++ Q+ +RPYWCISRQR WGVPI
Sbjct: 443 ASEQWFINTDRLKSRAAAALEQVDVYPRTNAEASKRAMLTQLQKRPYWCISRQRAWGVPI 502
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PV Y + +++N A I+H C+L+ G DFWWS +E LL
Sbjct: 503 PVLYSRKSGQVVLNAALIEHLCSLLRSQGSMDFWWSRSLEDLL 545
>gi|260804683|ref|XP_002597217.1| hypothetical protein BRAFLDRAFT_203583 [Branchiostoma floridae]
gi|229282480|gb|EEN53229.1| hypothetical protein BRAFLDRAFT_203583 [Branchiostoma floridae]
Length = 960
Score = 484 bits (1246), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/635 (42%), Positives = 372/635 (58%), Gaps = 50/635 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQV-PA--HLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEYK DH+S S+Y K + + PA ++ G D+ L WTT PW++PAN+ +
Sbjct: 196 TALAEAELEYKEDHVSHSVYAKFPIATLSPALKDIVGGGNDISVLTWTTLPWTIPANEAM 255
Query: 475 AFNPALEYSVASVK--GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P+ EY + K G I+A VE ++V+ FPG L+ T HP K
Sbjct: 256 CYTPSHEYCLCQCKTTGQLYILATERVEATAQVLGIHLEVLNTFPGIALEGSTCQHP-TK 314
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ LLPA VS +KGTGLVH APAHG +D+ +ALA ++PVL ++ GKY+ AGP
Sbjct: 315 SGKVSPLLPAQHVSMAKGTGLVHTAPAHGMEDYTVALAFQLPVLTMVDEDGKYTDQAGPD 374
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+G NI DG + V+ + ++ +NY+HSYPYDWRTK+PV ++AS QWF++T IK
Sbjct: 375 LKGKNIFTDGNETVVEQLRSAGHLVHEQNYKHSYPYDWRTKEPVFIRASLQWFVNTNTIK 434
Query: 651 PEALACLEEVNFVPE-SAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEA 707
A+ + V P+ +A +L+ ++ R YWCISRQRVWGVPIPVFY ++N+
Sbjct: 435 DRAVDLIGGVRMYPDGTAASSLKAWVSTRNYWCISRQRVWGVPIPVFYHRQSGKPLLNKE 494
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL--------NTSDVNSNVTKSNDILDIWFDSGISW 759
++ H +L+ G D WW+L +E+LL SD+ + K DILDIWFDSG+SW
Sbjct: 495 SVSHVMSLVRSQGTDCWWTLPMEELLPDDIIKKAGYSDI-TEFEKGADILDIWFDSGVSW 553
Query: 760 SHVLKDKP--AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
+ VL+D A +Y+EG DQ GWF SSLLTSVA+ +AP+R+VF+HGF + E G KMSK
Sbjct: 554 AAVLQDSGGVADMYLEGKDQHGGWFQSSLLTSVAVTGSAPYRSVFVHGFAMAEDGTKMSK 613
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNV+ + + G K K PAYG DVLRWWVA +
Sbjct: 614 SLGNVVDPNLVVSGGKN--------------------KDKHPAYGADVLRWWVAG-SDVH 652
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V IG NILNS++D V K+R LR+LLG L ++S R +D YML LC++
Sbjct: 653 SHVYIGNNILNSARDSVLKVRRILRFLLGNLSGFRPGEHTVSYNQLRPLDQYMLHVLCQY 712
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y F + + + L V ELS+FY + KDRLYCD + R +I
Sbjct: 713 AQKVTDAYENFHFTKVQYLTLGLVTKELSSFYLNITKDRLYCDDQSSTGRRGCQTVQFHI 772
Query: 994 FHVLLRTVAPIMPHLAEEVYSH---LPSRQGTFSS 1025
VL +T+AP++PHLAEE+Y H L Q F S
Sbjct: 773 LEVLTKTLAPVLPHLAEEIYLHHTCLGEVQSVFKS 807
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/406 (51%), Positives = 273/406 (67%), Gaps = 12/406 (2%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
CGFSELYSWQR+ + + +F+LHDGPPYANG PH+GHA+NKILKD+ R LL+G RV Y
Sbjct: 35 CGFSELYSWQRQQ-DRQKDFVLHDGPPYANGDPHVGHALNKILKDVINRYKLLRGYRVDY 93
Query: 62 VPGWDCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELKA++ + L PL IR K +NFA + I Q F WGV+ADWE
Sbjct: 94 RPGWDCHGLPIELKALSEGRESFRSLQPLQIRNKGRNFAEKAIKNQMDAFRRWGVMADWE 153
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
H CY TFDKEY QL FY +Y++ YIY+D KPV++SPSSRTALAE+ELEYK DHVS S
Sbjct: 154 HGCYFTFDKEYEAKQLEVFYKMYEKGYIYQDFKPVFYSPSSRTALAEAELEYKEDHVSHS 213
Query: 179 IYLKIKLNQV-PA--HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK--GA 233
+Y K + + PA ++ G D+ L WTT PW++PAN+ + + P+ EY + K G
Sbjct: 214 VYAKFPIATLSPALKDIVGGGNDISVLTWTTLPWTIPANEAMCYTPSHEYCLCQCKTTGQ 273
Query: 234 NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
I+A VE+ +EV+ FPG L+ T HP K + LLPA VS +KG
Sbjct: 274 LYILATERVEATAQVLGIHLEVLNTFPGIALEGSTCQHP-TKSGKVSPLLPAQHVSMAKG 332
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TGLVH APAHG +D+ +ALA ++PVL ++ GKY+ AGP L+G NI DG + V+ +
Sbjct: 333 TGLVHTAPAHGMEDYTVALAFQLPVLTMVDEDGKYTDQAGPDLKGKNIFTDGNETVVEQL 392
Query: 354 EP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ +NY+HSYPYDWRTK+PV ++AS QWF++T IK A+
Sbjct: 393 RSAGHLVHEQNYKHSYPYDWRTKEPVFIRASLQWFVNTNTIKDRAV 438
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L ++ GKY+ AGP L+G NI +G + V+ + ++ +NY+HSYPYDWRTK+P
Sbjct: 358 LTMVDEDGKYTDQAGPDLKGKNIFTDGNETVVEQLRSAGHLVHEQNYKHSYPYDWRTKEP 417
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPE-SAKKSLRDQIAQRPYWCISRQRVWGVP 1222
V ++AS QWF++T IK A+ + GV P+ +A SL+ ++ R YWCISRQRVWGVP
Sbjct: 418 VFIRASLQWFVNTNTIKDRAVDLIGGVRMYPDGTAASSLKAWVSTRNYWCISRQRVWGVP 477
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IPVFY ++N+ ++ H +L+ G D WW+LP+E+LL
Sbjct: 478 IPVFYHRQSGKPLLNKESVSHVMSLVRSQGTDCWWTLPMEELL 520
>gi|432940699|ref|XP_004082722.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like [Oryzias
latipes]
Length = 1007
Score = 484 bits (1246), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/626 (42%), Positives = 375/626 (59%), Gaps = 48/626 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY P+H+S+++Y L P L EG D+ L+WTT PW+LPANQ +
Sbjct: 243 TALAEAELEYNPEHVSRAVYATFALTTPPPGLPAEEGLDDVSLLVWTTQPWTLPANQAVC 302
Query: 476 FNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+ P EYSV VK A+ ++VA L T++ V F G L+ HP+N
Sbjct: 303 YMPNAEYSV--VKRADTSQLLLVAAERAAGLAALLGTELRSVSTFTGSQLEGGMCTHPMN 360
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ + LLPA V+ +KGTGLVH APAHG +D+ +A K+PV ++ + G+++ AGP
Sbjct: 361 PGVQ-VPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQFKLPVDCMVDDDGRFTELAGP 419
Query: 592 GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
L+GL++L +G ++V+ ++ + ++ + HSYPYDWRTK+PV+++ S+QWFI+T +
Sbjct: 420 QLQGLSVLTEGTEKVISMLRENGALVLEQQCVHSYPYDWRTKQPVLIRPSKQWFINTLSL 479
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
+ +A L++V +PESA+ +L + +R YWCISRQR WGVPIPVFY D+ ++N+
Sbjct: 480 RDKAKEVLQKVQVLPESARGSLLAMLDRRTYWCISRQRSWGVPIPVFYHKDSGEPLINKD 539
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-------NTSDVNSNVTKSNDILDIWFDSGISWS 760
+ H L E G D WW L +E LL + S+ + D+LDIWFDSG SW+
Sbjct: 540 TVTHIAELFKEKGSDCWWELPIETLLPPNVLKKAGAGAASDFVRGEDVLDIWFDSGSSWA 599
Query: 761 HVLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
VL+ D A V +EG DQ+ GWF SSLLTSVA+++ AP++ + +HGF V E G KMSKS
Sbjct: 600 AVLEELDSRADVCVEGKDQLGGWFQSSLLTSVAVRNKAPYKCLVVHGFAVSETGEKMSKS 659
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI ++ G K A PAYG DVLRWWV A ++
Sbjct: 660 LGNVIDPDEVINGGKDGGA---------------------PAYGADVLRWWV-AESNIFS 697
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
+ IG N LNS++D + K+R++LR+LLG L T S+ YVD YML L +F
Sbjct: 698 ELQIGSNALNSARDSISKLRNTLRFLLGNLQGFDPRTQSVDAKRMHYVDQYMLHLLRQFS 757
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y EF +R R+L FV +LS+FYF+++KDRLYCD + R S L I
Sbjct: 758 MKVTDAYSEFDASRVIRLLQAFVTRDLSSFYFSIIKDRLYCDPEDSPGRRSCQTALEEIL 817
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQ 1020
+ R+VAPI+PHLAEEVY P +
Sbjct: 818 DGVTRSVAPILPHLAEEVYQLAPGHE 843
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 272/405 (67%), Gaps = 14/405 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
EC F+ELYSWQRE K +F LHDGPPYANG PH+GHA+NKILKDI R +L+G++VH
Sbjct: 84 ECDFAELYSWQRER-KAKKKFSLHDGPPYANGAPHVGHALNKILKDIRNRFEVLRGRQVH 142
Query: 61 YVPGWDCHGLPIELKAITS-KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
YVPGWDCHGLPIELKA+ L+PL IR++A+ FA I QKA F+ WGV+ADWE
Sbjct: 143 YVPGWDCHGLPIELKALGGLCASGLTPLQIRQRAREFAEGAIAQQKAAFQRWGVMADWEQ 202
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
CY+TFD Y QL F +Y + +Y+D KPV+WSPSSRTALAE+ELEY P+HVS+++
Sbjct: 203 -CYYTFDGPYEAAQLKVFQEMYSKGLVYQDYKPVFWSPSSRTALAEAELEYNPEHVSRAV 261
Query: 180 YLKIKLNQVPAHL--LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--- 234
Y L P L EG D+ L+WTT PW+LPANQ + + P EYSV VK A+
Sbjct: 262 YATFALTTPPPGLPAEEGLDDVSLLVWTTQPWTLPANQAVCYMPNAEYSV--VKRADTSQ 319
Query: 235 -VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
++VA L T++ V F G L+ HP+N + + LLPA V+ +KG
Sbjct: 320 LLLVAAERAAGLAALLGTELRSVSTFTGSQLEGGMCTHPMNPGVQ-VPLLPANHVTMAKG 378
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TGLVH APAHG +D+ +A K+PV ++ + G+++ AGP L+GL++L +G ++V+ ++
Sbjct: 379 TGLVHTAPAHGMEDYSVASQFKLPVDCMVDDDGRFTELAGPQLQGLSVLTEGTEKVISML 438
Query: 354 EPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ ++ + HSYPYDWRTK+PV+++ S+QWFI+T ++ +A
Sbjct: 439 RENGALVLEQQCVHSYPYDWRTKQPVLIRPSKQWFINTLSLRDKA 483
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
++ + G+++ AGP L+GL++L EG ++V+ ++ + ++ + HSYPYDWRTK+PV+
Sbjct: 406 MVDDDGRFTELAGPQLQGLSVLTEGTEKVISMLRENGALVLEQQCVHSYPYDWRTKQPVL 465
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++ S+QWFI+T ++ +A L+ V +PESA+ SL + +R YWCISRQR WGVPIPV
Sbjct: 466 IRPSKQWFINTLSLRDKAKEVLQKVQVLPESARGSLLAMLDRRTYWCISRQRSWGVPIPV 525
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY D+ ++N+ + H L E G D WW LP+E LL
Sbjct: 526 FYHKDSGEPLINKDTVTHIAELFKEKGSDCWWELPIETLL 565
Score = 48.9 bits (115), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQ 1091
SI K LYCD + R S L I + R+VAPI+PHLAEEVY P +
Sbjct: 790 SIIKDRLYCDPEDSPGRRSCQTALEEILDGVTRSVAPILPHLAEEVYQLAPGHE 843
>gi|326915110|ref|XP_003203864.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Meleagris
gallopavo]
Length = 930
Score = 484 bits (1246), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/631 (40%), Positives = 378/631 (59%), Gaps = 44/631 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+S+S+Y+K L + P A +++G++ L+WTT PW++PANQ +
Sbjct: 166 TALAEAELEYNEQHVSRSVYMKFPLLKSPPKLASVIDGSSPTSVLVWTTQPWTVPANQAV 225
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P EYSV + G ++I+A VE+ T +V+ G+ L D + HP
Sbjct: 226 CYMPDAEYSVVKCATTGEHLILAANRVESTAAVLDTQFEVISTCKGEDLADGSCAHP-TI 284
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R LLPA V+ +KGTGLVH APAHG +D+ +A ++P L+ +G ++ AGP
Sbjct: 285 PGRVSPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASHHQLPTECLVDERGHFTEAAGPE 344
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ N+L +G + V+ +++ +L E Y HSYPYDWRTKKP+I++AS+QWF++T +K
Sbjct: 345 LKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTANVK 404
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
A L++V +P SA + + + +R +WCISRQR WGVPIPVFY DT ++N
Sbjct: 405 ATAQEVLKKVKIIPTSAVSRMLEMLDRRTFWCISRQRCWGVPIPVFYQKDTGESLINSET 464
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
I ++++ G D WW+L +EQLL+ V + K D+LDIWFDSG SW+H
Sbjct: 465 ITDIIKIVEQQGTDAWWTLPIEQLLSKEAVAKAGGHDVLDYVKGQDVLDIWFDSGTSWAH 524
Query: 762 VLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+ ++ A VY+EG DQ+ GWF SSLLTSVA + AP++ + +HGF + EKG KMSKS+
Sbjct: 525 VLEGTEQRADVYLEGKDQLGGWFQSSLLTSVATRKKAPYKTLIVHGFTLGEKGEKMSKSI 584
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ + G D T K P YG DVLRWWV A ++
Sbjct: 585 GNVVDPDVVINGGD----------------DHT----KDPPYGADVLRWWV-AESNVFTE 623
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V IG +LN+++DD+ K+R++LR++LG + + T SI VD YML L ++ +
Sbjct: 624 VLIGPVVLNAARDDINKLRNTLRFMLGNMAGFNPETDSIPPSEMYIVDQYMLHLLQDYGS 683
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++ Y++ R+L F LS FYF+++KDRLYC+ R S L
Sbjct: 684 KVTEAYKQYDYSKVVRLLQAFCSRNLSNFYFSIIKDRLYCEEEKDPKRRSCQTVLAEALD 743
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
V++R+ API+PHLAEEV+ HLP ++ + F
Sbjct: 744 VVVRSFAPILPHLAEEVFQHLPYKKDSEGVF 774
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/403 (49%), Positives = 274/403 (67%), Gaps = 12/403 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
GF ELYSWQR+ K EF LHDGPPYANG PH+GHA+NKILKDIT R ++++G +VHYV
Sbjct: 8 GFLELYSWQRQR-KAKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYV 66
Query: 63 PGWDCHGLPIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
PGWDCHGLPIELKA++ + LSP++IR+KAK FA I QKA F WG++ADW N
Sbjct: 67 PGWDCHGLPIELKALSEIKGAENLSPVEIRQKAKEFAERAIEKQKAAFIRWGIMADWA-N 125
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
CY TFD +Y NQL F+ +Y + +IY+D KPV+WSPS++TALAE+ELEY HVS+S+Y
Sbjct: 126 CYCTFDPKYEANQLRVFHKMYDKGFIYQDYKPVFWSPSAKTALAEAELEYNEQHVSRSVY 185
Query: 181 LKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKGANV 235
+K L + P A +++G++ L+WTT PW++PANQ + + P EYSV + G ++
Sbjct: 186 MKFPLLKSPPKLASVIDGSSPTSVLVWTTQPWTVPANQAVCYMPDAEYSVVKCATTGEHL 245
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
I+A VES T EV+ G+ L D + HP R LLPA V+ +KGTG
Sbjct: 246 ILAANRVESTAAVLDTQFEVISTCKGEDLADGSCAHP-TIPGRVSPLLPANHVTMAKGTG 304
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH APAHG +D+ +A ++P L+ +G ++ AGP L+ N+L +G + V+ +++
Sbjct: 305 LVHTAPAHGMEDYSVASHHQLPTECLVDERGHFTEAAGPELKNKNVLEEGNEAVIKMLQA 364
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+L E Y HSYPYDWRTKKP+I++AS+QWF++T +K A
Sbjct: 365 AGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTANVKATA 407
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 107/165 (64%), Gaps = 4/165 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ +G ++ AGP L+ N+L EG + V+ +++ +L E Y HSYPYDWRTKKP+I
Sbjct: 330 LVDERGHFTEAAGPELKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKPMI 389
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++T +K A L+ V +P SA + + + +R +WCISRQR WGVPIPV
Sbjct: 390 IRASKQWFVNTANVKATAQEVLKKVKIIPTSAVSRMLEMLDRRTFWCISRQRCWGVPIPV 449
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
FY DT ++N I ++++ G D WW+LP+EQLL+ V
Sbjct: 450 FYQKDTGESLINSETITDIIKIVEQQGTDAWWTLPIEQLLSKEAV 494
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
SI K LYC+ R S L V++R+ API+PHLAEEV+ HLP ++ + F
Sbjct: 715 SIIKDRLYCEEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQHLPYKKDSEGVF 774
>gi|402857160|ref|XP_003893139.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Papio anubis]
Length = 1007
Score = 484 bits (1246), Expect = e-133, Method: Compositional matrix adjust.
Identities = 268/627 (42%), Positives = 381/627 (60%), Gaps = 59/627 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVEN----LKWTFQTDIDVVCDFPGQYLQDITYIH 528
+ P +Y+V S G ++A VE L+++F T +D L++ T H
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVETVASTLEFSFPTGVD---------LENGTCSH 361
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ ++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++
Sbjct: 362 PLIPDKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDV 420
Query: 589 AGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AGP L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+
Sbjct: 421 AGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINI 480
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 704
IK A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++
Sbjct: 481 ADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLI 540
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSG 756
N I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG
Sbjct: 541 NSQTIEHIVKLVEQHGSDVWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSG 599
Query: 757 ISWSHVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
SWSHVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG K
Sbjct: 600 TSWSHVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPYKTVIVHGFTLGEKGEK 659
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS+GNVI + G Q K P YG DVLRWWV A +
Sbjct: 660 MSKSLGNVIHPDVVVNGG--------------------QDQSKEPPYGADVLRWWV-ADS 698
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRL 930
+ V IG ++LNS++DD+ K+R++LR+LLG + + + T SI +D YML L
Sbjct: 699 NVFTEVAIGPSVLNSARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLL 758
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
+ N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L
Sbjct: 759 QDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTAL 818
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
I V++R+ API+PHLAEEV+ H+P
Sbjct: 819 VEILDVIVRSFAPILPHLAEEVFQHIP 845
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/496 (43%), Positives = 310/496 (62%), Gaps = 38/496 (7%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFP-GQYLQDITYIHPINKEQRDLKLLPAGFVSSS 291
++A VE++ T + FP G L++ T HP+ ++ LLPA V+ +
Sbjct: 328 DLYVLAADKVETVASTLE------FSFPTGVDLENGTCSHPLIPDKAS-PLLPANHVTMA 380
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH 351
KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+
Sbjct: 381 KGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIK 440
Query: 352 LVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GN 404
+++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 441 MLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIPGS 500
Query: 405 IL-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHA 458
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 501 ALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGS 557
Query: 459 LIWTTTPWSLPANQFI 474
+W W+LP Q +
Sbjct: 558 DVW----WTLPPEQLL 569
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 410 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 469
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 470 IRASKQWFINIADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 529
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 530 FHHKTKDEYLINSQTIEHIVKLVEQHGSDVWWTLPPEQLL 569
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 795 SIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 845
>gi|355695425|gb|AES00006.1| isoleucyl-tRNA synthetase 2, mitochondrial [Mustela putorius furo]
Length = 932
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/632 (41%), Positives = 376/632 (59%), Gaps = 46/632 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S++IY+K L + L ++G++ + LIWTT PW++PANQ +
Sbjct: 176 TALAEAELEYNPEHVSRAIYVKFPLLKPSPQLVSLIDGSSPVSFLIWTTQPWTIPANQAV 235
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A V + +T +V+ F G L+ T HP+
Sbjct: 236 CYMPDTKYAVVKCSKSGDLYILAADKVTAVASALETTFEVISTFSGVDLETGTCAHPLIP 295
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ +D LLPA V+ +KGTGLVH APAHG +D+ +A +P L+ G ++ AGP
Sbjct: 296 D-KDSPLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHNLPTDCLVDEDGVFTDVAGPE 354
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +L E HSYPYDWRTKKPV+++AS+QWF++ IK
Sbjct: 355 LQNKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNLTDIK 414
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 415 ATAKELLKKVKFIPGSALNAMVETMDRRPYWCISRQRVWGVPIPVFHHKTKDEFLINSQT 474
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 475 TEHIIKLVEQHGSDVWWTLPPEQLL-PEEVLSQVGGPDALEYAPGQDILDIWFDSGTSWS 533
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
VL D+ A +Y+EG DQ+ GWF SSLLTSVA + APF+ V +HGF + EKG KMSKS
Sbjct: 534 CVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPFKTVVVHGFTLGEKGEKMSKS 593
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 594 LGNVIDPDVVINGG--------------------QDPNKEPPYGADVLRWWV-AESNVFT 632
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V I + LN+++DD+ K+R++LR+LLG + + T S+ +D YML L +
Sbjct: 633 EVTISPSALNAARDDISKLRNTLRFLLGNVAGFNPETDSVPVNDMYVIDQYMLHLLQDLA 692
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + Y ++ + + R+L F ELS+FYF+++KDRLYC++ + R S I
Sbjct: 693 NKITDSYKQYDFGKVVRLLRAFYTRELSSFYFSIIKDRLYCENADDPKRRSCQTAFAEIL 752
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
V++R+VAPI+PHLAEEV+ H+P + S F
Sbjct: 753 DVVVRSVAPILPHLAEEVFQHIPYAKEPKSVF 784
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 283/430 (65%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 15 KCGFSELYSWQRER-KAKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIH 73
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
YVPGWDCHGLPIE+K + K + LS ++IR+KA++FA I Q++ F WG++ADW
Sbjct: 74 YVPGWDCHGLPIEIKVFSELGGKAQNLSAVEIREKARSFAEAAIKKQRSAFIRWGIMADW 133
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD++Y QL FY +Y++ IYR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 134 -NNCYYTFDRKYEAKQLRLFYQMYEKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 192
Query: 178 SIYLKIKLNQVPAH---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
+IY+K L + L++G++ + LIWTT PW++PANQ + + P +Y+V S G
Sbjct: 193 AIYVKFPLLKPSPQLVSLIDGSSPVSFLIWTTQPWTIPANQAVCYMPDTKYAVVKCSKSG 252
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V ++ +T EV+ F G L+ T HP+ + +D LLPA V+ +K
Sbjct: 253 DLYILAADKVTAVASALETTFEVISTFSGVDLETGTCAHPLIPD-KDSPLLPANHVTMTK 311
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 312 GTGLVHTAPAHGMEDYSVASQHNLPTDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 371
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ +L E HSYPYDWRTKKPV+++AS+QWF++ IK T +L +V
Sbjct: 372 LQASKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNLTDIK------ATAKELLKKVK 425
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 426 FI---PGSAL 432
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +L E HSYPYDWRTKKPV+
Sbjct: 340 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKPVV 399
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P SA ++ + + +RPYWCISRQRVWGVPIPV
Sbjct: 400 IRASKQWFVNLTDIKATAKELLKKVKFIPGSALNAMVETMDRRPYWCISRQRVWGVPIPV 459
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 460 FHHKTKDEFLINSQTTEHIIKLVEQHGSDVWWTLPPEQLL 499
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
SI K LYC++ + R S I V++R+VAPI+PHLAEEV+ H+P + S F
Sbjct: 725 SIIKDRLYCENADDPKRRSCQTAFAEILDVVVRSVAPILPHLAEEVFQHIPYAKEPKSVF 784
>gi|57530344|ref|NP_001006397.1| isoleucine--tRNA ligase, mitochondrial precursor [Gallus gallus]
gi|82233833|sp|Q5ZKA2.1|SYIM_CHICK RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
Precursor
gi|53131721|emb|CAG31841.1| hypothetical protein RCJMB04_12b19 [Gallus gallus]
Length = 1000
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 286/763 (37%), Positives = 422/763 (55%), Gaps = 74/763 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+S+S+Y+K L + P A +++G++ L+WTT PW++PANQ +
Sbjct: 236 TALAEAELEYNEQHVSRSVYMKFPLLKSPPKLASVIDGSSPASVLVWTTQPWTVPANQAV 295
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P EYSV + G ++I+A VE+ T +V+ G L D + HP
Sbjct: 296 CYMPDAEYSVVKCATTGEHLILAADRVESTAAVLDTQFEVISTCKGVDLADGSCAHP-TI 354
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R LLPA V+ +KGTGLVH APAHG +D+ +A ++P L+ G ++ AGP
Sbjct: 355 AGRVSPLLPANHVTMTKGTGLVHTAPAHGMEDYNVASHHQLPTECLVDESGHFTEAAGPE 414
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ N+L +G + V+ +++ +L E Y HSYPYDWRTKKP+I++AS+QWF++T +K
Sbjct: 415 LKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTANVK 474
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
A L++V +P SA + + + +R +WCISRQR WGVPIPVFY DT ++N
Sbjct: 475 ATAQEALKKVKIIPTSAVNRMLEMLDRRTFWCISRQRCWGVPIPVFYQKDTGESLINSET 534
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
I ++++ G D WW+L +EQLL+ V + K D+LDIWFDSG SW+H
Sbjct: 535 IADVIKIVEQQGTDAWWTLPIEQLLSKEAVAKAGGHNVLDYVKGQDVLDIWFDSGTSWAH 594
Query: 762 VLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+ ++ A VY+EG DQ+ GWF SSLLTSVA + AP++ + +HGF + EKG KMSKS+
Sbjct: 595 VLEGAEQRADVYLEGKDQLGGWFQSSLLTSVATRKKAPYKTLVVHGFTLGEKGEKMSKSI 654
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ + G D T K P YG DVLRWWV A ++
Sbjct: 655 GNVVDPDVVING----------------GDDHT----KDPPYGADVLRWWV-AESNVFTE 693
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V IG +LN+++DD+ K+R++LR++LG + + T SI VD YML L ++ +
Sbjct: 694 VLIGPVVLNAARDDINKLRNTLRFMLGNMAGFNPETDSIPPSEMYIVDQYMLHLLQDYGS 753
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y E+ Y++ R+L F LS FYF+++KDRLYC+ R S L
Sbjct: 754 KVTEAYKEYDYSKVVRLLQAFCSRNLSNFYFSIIKDRLYCEEEKDPKRRSCQTVLAEALD 813
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSR---QGTF--------SSFCHFKVYLQYSGSIAKRIL 1044
V++R+ API+PHLAEEV+ HLP + +G F S + + G+ A R
Sbjct: 814 VVVRSFAPILPHLAEEVFQHLPYKKDSEGVFRTGWINASSGWKKPGIEEAIEGACAMRDS 873
Query: 1045 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYH 1104
+ SI+G+ L + V++ ++ L E + + SR S +
Sbjct: 874 FLGSISGKNALE--------YEVIIVIEPGLLFELMEALQAEESSR---VSQLNEIMMAS 922
Query: 1105 HLNLITNQGKYSP-DAG-------PGLEGLNILGEGKDQVLHL 1139
L++ K +P DA LEG +I E QV+ L
Sbjct: 923 QTTLLSEIPKETPADANIVKGNFLINLEGGDIREESSYQVIAL 965
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/403 (49%), Positives = 272/403 (67%), Gaps = 12/403 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
GF ELYSWQR+ K EF LHDGPPYANG PH+GHA+NKILKDIT R ++++G +VHYV
Sbjct: 78 GFLELYSWQRQR-KAKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYV 136
Query: 63 PGWDCHGLPIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
PGWDCHGLPIELKA++ + LSP++IR+KAK FA I QKA F WG++ADW N
Sbjct: 137 PGWDCHGLPIELKALSEVKGAENLSPVEIRQKAKEFAERAIEKQKAAFIRWGIMADWA-N 195
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
CY TFD +Y NQL F+ +Y + +IY+D KPV+WSPS++TALAE+ELEY HVS+S+Y
Sbjct: 196 CYRTFDPKYEANQLRVFHKMYDKGFIYQDYKPVFWSPSAKTALAEAELEYNEQHVSRSVY 255
Query: 181 LKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKGANV 235
+K L + P A +++G++ L+WTT PW++PANQ + + P EYSV + G ++
Sbjct: 256 MKFPLLKSPPKLASVIDGSSPASVLVWTTQPWTVPANQAVCYMPDAEYSVVKCATTGEHL 315
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
I+A VES T EV+ G L D + HP R LLPA V+ +KGTG
Sbjct: 316 ILAADRVESTAAVLDTQFEVISTCKGVDLADGSCAHP-TIAGRVSPLLPANHVTMTKGTG 374
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH APAHG +D+ +A ++P L+ G ++ AGP L+ N+L +G + V+ +++
Sbjct: 375 LVHTAPAHGMEDYNVASHHQLPTECLVDESGHFTEAAGPELKNKNVLEEGNEAVIKMLQA 434
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+L E Y HSYPYDWRTKKP+I++AS+QWF++T +K A
Sbjct: 435 AGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTANVKATA 477
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 106/165 (64%), Gaps = 4/165 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ N+L EG + V+ +++ +L E Y HSYPYDWRTKKP+I
Sbjct: 400 LVDESGHFTEAAGPELKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKPMI 459
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++T +K A L+ V +P SA + + + +R +WCISRQR WGVPIPV
Sbjct: 460 IRASKQWFVNTANVKATAQEALKKVKIIPTSAVNRMLEMLDRRTFWCISRQRCWGVPIPV 519
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
FY DT ++N I ++++ G D WW+LP+EQLL+ V
Sbjct: 520 FYQKDTGESLINSETIADVIKIVEQQGTDAWWTLPIEQLLSKEAV 564
>gi|195478617|ref|XP_002086516.1| GE23171 [Drosophila yakuba]
gi|194186306|gb|EDW99917.1| GE23171 [Drosophila yakuba]
Length = 938
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/628 (40%), Positives = 378/628 (60%), Gaps = 55/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +HIS S+Y++ LN P+ ++AL+WTTTPW+LP+NQ I +N
Sbjct: 214 TALAEAELEYDANHISPSVYVRFALN--PSSFDIQDKQIYALVWTTTPWTLPSNQAICYN 271
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + ++ N ++A L+++ + Q ++V G+ L ++Y HPI+ E
Sbjct: 272 ASLEYVLVTLSDRNQDELYLMASALMKDFESNTQLKCEIVQHLSGESLSKLSYNHPIDIE 331
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q ++ A V SKGTGLVH APAHG +DFL++L KIPV + +G Y+ +A L
Sbjct: 332 QSNMPFFEASHVQDSKGTGLVHTAPAHGPEDFLVSLTHKIPVKCFVNEEGTYTKEAPDFL 391
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 392 RGQSVLDQGNSLVLERIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 451
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
LE+V P +++KK L Q+ +RPYWCISRQR WGVPIPVFY ++ +++N
Sbjct: 452 ADALEQVEIYPKANADASKKALLTQLQKRPYWCISRQRAWGVPIPVFYSRESGKVVLNST 511
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWS 760
I+H C L+ + G DFWW SVE+L+ + + ++ K DILDIWFDSG +WS
Sbjct: 512 LIEHLCNLLRQEGSIDFWWVKSVEELVPANILRELRCEAKDLVKGTDILDIWFDSGSTWS 571
Query: 761 HVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL KDK A +Y+EG DQ GWF SSLL S+A + +P++ +F+HGF VDEKG KMSKS+
Sbjct: 572 AVLGKDKIADLYLEGYDQFTGWFQSSLLMSIAARECSPYKALFVHGFTVDEKGYKMSKSL 631
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI S IT+ YG D LRWWVA+H ++ +
Sbjct: 632 GNVI-----------------------SPKQITK------KYGTDALRWWVASHGTQHMS 662
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQN 935
+ + +L + +++ K+R +LRYL GV+ + + I Y++ ++L +L EF +
Sbjct: 663 ITVSDKLLQQAAENLSKVRGTLRYLKGVIGDKQSAEKLIPTSDKSYLNRFLLSQLVEFGS 722
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ LY ++Y R + NF+ N++SA Y L+KDRLYC + + L+ TL + +
Sbjct: 723 EVEKLYNAYEYNRVVAYVQNFIANQVSAVYVHLIKDRLYCG--DDQEILAIRQTLTHCYQ 780
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L +++ P++P L EE +S+ + F
Sbjct: 781 QLCKSLWPVVPFLVEESWSYYDTTCAAF 808
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/399 (50%), Positives = 271/399 (67%), Gaps = 8/399 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
S Y QR A GKP F+LHDGPPYANG H+GHAVNKILKDITLR + G++V+YV
Sbjct: 56 AVSYAYQEQRLAEKGKPTFVLHDGPPYANGELHMGHAVNKILKDITLRQRVAHGQQVNYV 115
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NC 121
PGWDCHGLPIELKA TS + S +IRKK++ FALE I +QK EF SWG+LA+W+ N
Sbjct: 116 PGWDCHGLPIELKA-TSTAQNQSAQEIRKKSRAFALEAIKSQKEEFSSWGILANWQKDNI 174
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T +++ NQL FYNLY++ +YRDLKPVYWSPSSRTALAE+ELEY +H+S S+Y+
Sbjct: 175 YMTLQPDFIVNQLQMFYNLYEKGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVYV 234
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIV 237
+ LN P+ ++AL+WTTTPW+LP+NQ I +N +LEY + ++ N ++
Sbjct: 235 RFALN--PSSFDIQDKQIYALVWTTTPWTLPSNQAICYNASLEYVLVTLSDRNQDELYLM 292
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A L++ + Q E+V G+ L ++Y HPI+ EQ ++ A V SKGTGLV
Sbjct: 293 ASALMKDFESNTQLKCEIVQHLSGESLSKLSYNHPIDIEQSNMPFFEASHVQDSKGTGLV 352
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL++L KIPV + +G Y+ +A L G ++L G VL + DV
Sbjct: 353 HTAPAHGPEDFLVSLTHKIPVKCFVNEEGTYTKEAPDFLRGQSVLDQGNSLVLERIAEDV 412
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 413 VHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 451
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 107/163 (65%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +G Y+ +A L G ++L +G VL + DV+ + +HSYP DWRTKKPVI++
Sbjct: 376 FVNEEGTYTKEAPDFLRGQSVLDQGNSLVLERIAEDVVHSSKLEHSYPIDWRTKKPVIIR 435
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A LE V P +++KK+L Q+ +RPYWCISRQR WGVPI
Sbjct: 436 ASEQWFINTEKLKSPAADALEQVEIYPKANADASKKALLTQLQKRPYWCISRQRAWGVPI 495
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PVFY ++ +++N I+H C L+ + G DFWW VE+L+
Sbjct: 496 PVFYSRESGKVVLNSTLIEHLCNLLRQEGSIDFWWVKSVEELV 538
>gi|194873283|ref|XP_001973176.1| GG15950 [Drosophila erecta]
gi|190654959|gb|EDV52202.1| GG15950 [Drosophila erecta]
Length = 938
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/628 (40%), Positives = 375/628 (59%), Gaps = 55/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +HIS S+Y++ ++ P+ ++AL+WTTTPW+LP+NQ I +N
Sbjct: 214 TALAEAELEYDANHISPSVYVRFAIS--PSSFDIKDKQIYALVWTTTPWTLPSNQAICYN 271
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + + N ++A L+ + + Q ++V G+ L ++Y HPI+KE
Sbjct: 272 ASLEYVLVRLSDRNQDELYLMASALMADFEANTQLKCEIVQHLNGESLSKLSYNHPIDKE 331
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q +L A V SKGTGLVH APAHG +DFL++L +KI V + +G Y+ +A L
Sbjct: 332 QANLPFFEASHVQDSKGTGLVHTAPAHGPEDFLVSLTQKIHVKCFVNEEGTYTKEAPDFL 391
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 392 RGQSVLDQGNSLVLERIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 451
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
LE+V P +++KK L Q+ +RPYWCISRQR WGVPIPV Y D+ +++N
Sbjct: 452 ADALEQVEIYPRANADASKKALLTQLQKRPYWCISRQRAWGVPIPVLYSRDSGKVVLNST 511
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWS 760
I+H C L+ + G DFWW SVE+L+ + + ++ K DILDIWFDSG +WS
Sbjct: 512 LIEHLCNLLRQEGSIDFWWVKSVEELVPANLLRELRCEAKDLVKGTDILDIWFDSGSTWS 571
Query: 761 HVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL KDK A +Y+EG DQ GWF SSLL S+A + AP++ +F+HGF VDEKG KMSKS+
Sbjct: 572 AVLGKDKIADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGFTVDEKGYKMSKSL 631
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI S IT+ YG D LRWWVA+H ++ +
Sbjct: 632 GNVI-----------------------SPKQITK------KYGTDALRWWVASHGTQHMS 662
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQN 935
+ + +L + +++ K+R +LRYL GV+ + I Y++ Y+L L EF++
Sbjct: 663 ITVSDKLLQQAAENLGKVRGTLRYLKGVIGEKQSAEKLIPTSDKSYLNRYLLSELVEFES 722
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ LY ++Y R + NF+ N++SA Y L+KDRLYC + + L+ TL + +
Sbjct: 723 EVEKLYNAYEYNRVVAYVQNFIANQVSAVYVHLIKDRLYCG--DDQEILAIRQTLSHCYQ 780
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L +++ PI+P L EE +S+ + F
Sbjct: 781 QLCKSLWPIVPFLVEESWSYYDTTYAAF 808
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/399 (50%), Positives = 271/399 (67%), Gaps = 8/399 (2%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
S Y QR A GKP F+LHDGPPYANG H+GHAVNKILKDITLR + G++V+Y+
Sbjct: 56 AVSYAYQEQRLAEKGKPTFVLHDGPPYANGELHMGHAVNKILKDITLRQRVAHGQQVNYI 115
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NC 121
PGWDCHGLPIELKA TS + S +IRKK++ FAL+ I +QK EF SWG+LA+W+ N
Sbjct: 116 PGWDCHGLPIELKA-TSTAQNQSAQEIRKKSRAFALDAIRSQKEEFSSWGILANWQKDNI 174
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF E++ NQL FYNLY++ +YRDLKPVYWSPSS+TALAE+ELEY +H+S S+Y+
Sbjct: 175 YMTFQPEFIVNQLQMFYNLYEKGLVYRDLKPVYWSPSSKTALAEAELEYDANHISPSVYV 234
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIV 237
+ ++ P+ ++AL+WTTTPW+LP+NQ I +N +LEY + + N ++
Sbjct: 235 RFAIS--PSSFDIKDKQIYALVWTTTPWTLPSNQAICYNASLEYVLVRLSDRNQDELYLM 292
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A L+ + Q E+V G+ L ++Y HPI+KEQ +L A V SKGTGLV
Sbjct: 293 ASALMADFEANTQLKCEIVQHLNGESLSKLSYNHPIDKEQANLPFFEASHVQDSKGTGLV 352
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H APAHG +DFL++L +KI V + +G Y+ +A L G ++L G VL + DV
Sbjct: 353 HTAPAHGPEDFLVSLTQKIHVKCFVNEEGTYTKEAPDFLRGQSVLDQGNSLVLERIAEDV 412
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 413 VHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 451
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 106/163 (65%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +G Y+ +A L G ++L +G VL + DV+ + +HSYP DWRTKKPVI++
Sbjct: 376 FVNEEGTYTKEAPDFLRGQSVLDQGNSLVLERIAEDVVHSSKLEHSYPIDWRTKKPVIIR 435
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A LE V P +++KK+L Q+ +RPYWCISRQR WGVPI
Sbjct: 436 ASEQWFINTEKLKSPAADALEQVEIYPRANADASKKALLTQLQKRPYWCISRQRAWGVPI 495
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PV Y D+ +++N I+H C L+ + G DFWW VE+L+
Sbjct: 496 PVLYSRDSGKVVLNSTLIEHLCNLLRQEGSIDFWWVKSVEELV 538
>gi|301769279|ref|XP_002920059.1| PREDICTED: LOW QUALITY PROTEIN: isoleucyl-tRNA synthetase,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 1059
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/632 (41%), Positives = 376/632 (59%), Gaps = 46/632 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+S+Y+K +K + +++G++ + L+WTT PW++PANQ +
Sbjct: 298 TALAEAELEYNPEHVSRSVYVKFPVLKPSPKLVSIIDGSSPVSFLVWTTQPWTIPANQAV 357
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P Y+V S G I+A V ++ +T +V+ F G L++ T HP+
Sbjct: 358 CYMPDANYAVVKCSRSGDLYILAADKVTSVASALETTFEVISTFSGVDLENGTCAHPLIP 417
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +DF +A +P L+ G ++ AGP
Sbjct: 418 DKAS-PLLPANHVTMTKGTGLVHTAPAHGMEDFSVASQHNLPTDCLVDEDGVFTDVAGPE 476
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +L E HSYPYDWRTKKPV+++AS+QWF+ IK
Sbjct: 477 LQNKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVHITDIK 536
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 537 ATAKELLKKVKFIPGSALNAMVETMDRRPYWCISRQRVWGVPIPVFHHKTKDEFLINSQT 596
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 597 TEHIIKLVEQHGSDVWWTLPPEQLL-PEEVLSQVGGPDALEYAPGQDILDIWFDSGTSWS 655
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + APF+ V +HGF + EKG KMSKS
Sbjct: 656 YVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPFKTVVVHGFTLGEKGEKMSKS 715
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 716 LGNVIDPDVVINGG--------------------QDQNKEPPYGADVLRWWV-AESNVFT 754
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + ++LN+++DD+ K+R++LR+ LG + + T S+ +D YML L +
Sbjct: 755 EVTVSPSVLNAARDDISKLRNTLRFFLGNVAGFNPETDSVPVNDMYVIDQYMLHLLQDLA 814
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + Y ++ + + R+L F ELS FYF+++KDRLYC+ G R S L I
Sbjct: 815 NKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYCEHAGGPKRRSCQTALAEIL 874
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
V++R++API+PHLAEEV+ H+P + S F
Sbjct: 875 DVVVRSLAPILPHLAEEVFQHIPYSKEPRSVF 906
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 283/430 (65%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 137 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIH 195
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IRKKA++FA E I Q++ F WG++ADW
Sbjct: 196 FVPGWDCHGLPIEIKVLSELGGKAQNLSAVEIRKKARSFAEEAIKKQRSAFIRWGIMADW 255
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
NCYHTFD++Y QL FY +Y++ IYR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 256 T-NCYHTFDRKYEAKQLRIFYQMYEKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 314
Query: 178 SIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
S+Y+K +K + +++G++ + L+WTT PW++PANQ + + P Y+V S G
Sbjct: 315 SVYVKFPVLKPSPKLVSIIDGSSPVSFLVWTTQPWTIPANQAVCYMPDANYAVVKCSRSG 374
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V S+ +T EV+ F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 375 DLYILAADKVTSVASALETTFEVISTFSGVDLENGTCAHPLIPDKAS-PLLPANHVTMTK 433
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +DF +A +P L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 434 GTGLVHTAPAHGMEDFSVASQHNLPTDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 493
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ +L E HSYPYDWRTKKPV+++AS+QWF+ IK T +L +V
Sbjct: 494 LQASKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVHITDIK------ATAKELLKKVK 547
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 548 FI---PGSAL 554
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +L E HSYPYDWRTKKPV+
Sbjct: 462 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKPVV 521
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF+ IK A L+ V F+P SA ++ + + +RPYWCISRQRVWGVPIPV
Sbjct: 522 IRASKQWFVHITDIKATAKELLKKVKFIPGSALNAMVETMDRRPYWCISRQRVWGVPIPV 581
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 582 FHHKTKDEFLINSQTTEHIIKLVEQHGSDVWWTLPPEQLL 621
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
SI K LYC+ G R S L I V++R++API+PHLAEEV+ H+P + S F
Sbjct: 847 SIIKDRLYCEHAGGPKRRSCQTALAEILDVVVRSLAPILPHLAEEVFQHIPYSKEPRSVF 906
>gi|195019854|ref|XP_001985069.1| GH16853 [Drosophila grimshawi]
gi|193898551|gb|EDV97417.1| GH16853 [Drosophila grimshawi]
Length = 949
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/635 (41%), Positives = 378/635 (59%), Gaps = 64/635 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY + +S S+YL+ L+ + A +++AL+WTTTPW+LP+NQ I +N
Sbjct: 216 TALAEAELEYDANFVSPSVYLRFALSGLKASGATQGKEIYALVWTTTPWTLPSNQAICYN 275
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+L+Y + + N ++A LV++ + + + ++V G L D TY HP++K
Sbjct: 276 SSLDYVLIRLSDRNPNELYLMASALVDDFQASTEILCEIVERLAGSALADCTYQHPVDKA 335
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q L AG V SKGTGLVH APAHG DDFL++LA+K+P+ + G Y+ +A L
Sbjct: 336 QTALPFFAAGHVQDSKGTGLVHTAPAHGPDDFLISLAKKLPIKCYVNEAGIYTEEAPGFL 395
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
++L +G VL + DV++ ++HSYP DWRTK+PVI++AS+QWFIDT+++K A
Sbjct: 396 RNKSVLVEGNPLVLQHIATDVVYASQFEHSYPIDWRTKQPVIIRASEQWFIDTDKLKAPA 455
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEA 707
A LE V P ES+KK L Q+ +RPYWCISRQR WGVPIPV Y D +++N A
Sbjct: 456 AAALERVEIYPRVNAESSKKALLTQLHKRPYWCISRQRAWGVPIPVLYRRDNKQVVLNAA 515
Query: 708 NIKHFCTLI-DEHGPDFWWS---------LSVEQLLNTSDVNSNVTKSNDILDIWFDSGI 757
I+H C L+ +E DFWWS ++QL +D + K +DI DIWFDSG
Sbjct: 516 LIQHLCELLSNERSMDFWWSKPLEELLPDELLKQLGCKAD---ELIKGSDIFDIWFDSGS 572
Query: 758 SWSHVLKDKP---AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+WS VLK +P A +Y+EG DQ GWF SSLLTS+A ++ AP++ +F+HGF VDEKG K
Sbjct: 573 TWSAVLKKQPNQMADMYLEGYDQFTGWFQSSLLTSIAARNCAPYKALFVHGFTVDEKGHK 632
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKSVGNV IS IT+ YG DVLRWWVA+H
Sbjct: 633 MSKSVGNV-----------------------ISPKQITK------KYGTDVLRWWVASHG 663
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSES------TGSISRYVDVYMLK 928
++ ++ + +L + D++ K+R +LRYL GV++ + TGS S Y++ Y+L
Sbjct: 664 TQHMSITVSDKLLQQAADNLSKVRGTLRYLNGVINQKEQQQDLSIPTGSNS-YLNQYILH 722
Query: 929 RLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLH 988
L F+ ++ LY ++Y R + NF+ N++S Y L+KDRLYC + + S H
Sbjct: 723 SLLGFEEEIEKLYNAYEYNRVVATIQNFIANQISGIYVHLIKDRLYCG--DDQQLQSIRH 780
Query: 989 TLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
TL + + +L + + PI P+L EE +S+ F
Sbjct: 781 TLRHCYLLLCKALWPIAPYLIEESWSYYEPSGSAF 815
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 264/382 (69%), Gaps = 6/382 (1%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI 77
KP F+LHDGPPYANG H+GHAVNKILKDITLR ++QG++V+Y+PGWDCHGLPIELKA
Sbjct: 71 KPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVVQGQQVNYIPGWDCHGLPIELKAT 130
Query: 78 T-SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE-HNCYHTFDKEYVKNQLC 135
+ + LDIR+K++ FALE I QK EF SWG+LA+W+ + Y TF E++ NQL
Sbjct: 131 ADAAAGEQNALDIRQKSRAFALEAIELQKEEFRSWGILANWQPEHIYLTFQPEFIANQLH 190
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG 195
FYNLY++ +YRDLKPVYWSPSS+TALAE+ELEY + VS S+YL+ L+ + A
Sbjct: 191 LFYNLYERGLVYRDLKPVYWSPSSKTALAEAELEYDANFVSPSVYLRFALSGLKASGATQ 250
Query: 196 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEV 255
+++AL+WTTTPW+LP+NQ I +N +L+Y + + N + +L FQ E+
Sbjct: 251 GKEIYALVWTTTPWTLPSNQAICYNSSLDYVLIRLSDRNPNELYLMASALVDDFQASTEI 310
Query: 256 VCD----FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 311
+C+ G L D TY HP++K Q L AG V SKGTGLVH APAHG DDFL++
Sbjct: 311 LCEIVERLAGSALADCTYQHPVDKAQTALPFFAAGHVQDSKGTGLVHTAPAHGPDDFLIS 370
Query: 312 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDW 371
LA+K+P+ + G Y+ +A L ++L +G VL + DV++ ++HSYP DW
Sbjct: 371 LAKKLPIKCYVNEAGIYTEEAPGFLRNKSVLVEGNPLVLQHIATDVVYASQFEHSYPIDW 430
Query: 372 RTKKPVILKASQQWFIDTERIK 393
RTK+PVI++AS+QWFIDT+++K
Sbjct: 431 RTKQPVIIRASEQWFIDTDKLK 452
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 102/155 (65%), Gaps = 7/155 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ G Y+ +A L ++L EG VL + DV++ ++HSYP DWRTK+PVI++A
Sbjct: 381 VNEAGIYTEEAPGFLRNKSVLVEGNPLVLQHIATDVVYASQFEHSYPIDWRTKQPVIIRA 440
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
S+QWFIDT+++K A A LE V P ES+KK+L Q+ +RPYWCISRQR WGVPIP
Sbjct: 441 SEQWFIDTDKLKAPAAAALERVEIYPRVNAESSKKALLTQLHKRPYWCISRQRAWGVPIP 500
Query: 1225 VFY--DGDTIIVNEANIKHFCTLI-DEHGPDFWWS 1256
V Y D +++N A I+H C L+ +E DFWWS
Sbjct: 501 VLYRRDNKQVVLNAALIQHLCELLSNERSMDFWWS 535
>gi|255003795|ref|NP_001157270.1| isoleucyl-tRNA synthetase, mitochondrial [Danio rerio]
Length = 983
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/625 (41%), Positives = 379/625 (60%), Gaps = 50/625 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL---EGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+S+Y+ L +PA L EG +++ ALIWTT PW++PANQ +
Sbjct: 220 TALAEAELEYNPEHVSRSLYITFPLLTLPAKLTAKAEGLSNVSALIWTTQPWTIPANQAV 279
Query: 475 AFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
+ P ++YSV VK A+ ++VA + +L +T+++ + F G L+ HP
Sbjct: 280 CYMPKVQYSV--VKRADTEQLLLVATERINSLSSLLKTNLESLVTFAGTDLEGGVCQHP- 336
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+++ LLPA V+ +KGTGLVH APAHG DD+ +A +PV ++ +G+++ AG
Sbjct: 337 TIPSKEVPLLPASHVTMTKGTGLVHTAPAHGMDDYSVATHFNLPVECMVDEEGRFTELAG 396
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
L+ +++ +G V+ +++ V+ E+ HSYPYDWRTK+PV+++AS+QWFI+T
Sbjct: 397 AELQNKSVMDEGNAAVISVLQAAGAVVKEEDCVHSYPYDWRTKQPVVIRASRQWFINTAT 456
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNE 706
+K +A L++V +PESA+ +L + +R YWCISRQR WGVPIPVFY +T ++N+
Sbjct: 457 LKDKAKDALQKVRVIPESARSSLLSMLDRRTYWCISRQRSWGVPIPVFYHKETGEPLLNK 516
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV--------NSNVTKSNDILDIWFDSGIS 758
+ H + E G D WW+ VE L T DV S+ + D+LDIWFDSG S
Sbjct: 517 HTVTHIAKVFSEKGSDSWWTEPVETFL-TPDVLQKSKASSVSDYVRGEDVLDIWFDSGAS 575
Query: 759 WSHVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
W+ VL D A Y+EG DQI GWF SSLLTSVA+++ AP++ + +HGF V EKG KMS
Sbjct: 576 WAAVLPESDPRADSYVEGKDQIGGWFQSSLLTSVAVRNKAPYKALVVHGFAVSEKGEKMS 635
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GNV+ + G K + SV P YG DVLRWWV A ++
Sbjct: 636 KSIGNVVDPDVVINGGK-----DSSVS---------------PPYGADVLRWWV-AESNV 674
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
V IG N LN+++D + K+R++L++LLG L + ++ Y+D YML L E
Sbjct: 675 FSEVQIGPNALNAAKDSINKLRNTLKFLLGNLQGFDPRSQAVDPKQMHYIDQYMLHLLRE 734
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
F + Y EF Y R+L +F ELS FYF+++KDRLYCD + R S L
Sbjct: 735 FSMKVTDAYSEFNYGLVIRLLQSFTARELSNFYFSIIKDRLYCDPEDSVGRRSCQTVLEE 794
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
I + R++AP++PHLAEEVY H P
Sbjct: 795 ILDGVSRSIAPVLPHLAEEVYLHAP 819
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 280/406 (68%), Gaps = 15/406 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGF +LY WQRE K E+ LHDGPPYANG PH+GHA+NKILKDI R +L+G++VH
Sbjct: 61 KCGFDQLYKWQREK-KAKKEYCLHDGPPYANGDPHVGHALNKILKDIRNRFEVLRGRQVH 119
Query: 61 YVPGWDCHGLPIELKAITS-KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
YVPGWDCHGLPIELKA+ L+P+ IR+KA+ FA + I+ Q+A F+ WGV+ADW+
Sbjct: 120 YVPGWDCHGLPIELKALGDLGTNELTPVQIRQKAREFAEKAISRQRAAFQRWGVMADWD- 178
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
NCY+TFD +Y QL F ++ + IY+D KPV+WSPSSRTALAE+ELEY P+HVS+S+
Sbjct: 179 NCYYTFDGKYEAAQLKVFQEMHNKGLIYQDYKPVFWSPSSRTALAEAELEYNPEHVSRSL 238
Query: 180 YLKIKLNQVPAHLL---EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-- 234
Y+ L +PA L EG +++ ALIWTT PW++PANQ + + P ++YSV VK A+
Sbjct: 239 YITFPLLTLPAKLTAKAEGLSNVSALIWTTQPWTIPANQAVCYMPKVQYSV--VKRADTE 296
Query: 235 --VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++VA + SL +T++E + F G L+ HP +++ LLPA V+ +K
Sbjct: 297 QLLLVATERINSLSSLLKTNLESLVTFAGTDLEGGVCQHP-TIPSKEVPLLPASHVTMTK 355
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG DD+ +A +PV ++ +G+++ AG L+ +++ +G V+ +
Sbjct: 356 GTGLVHTAPAHGMDDYSVATHFNLPVECMVDEEGRFTELAGAELQNKSVMDEGNAAVISV 415
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++ V+ E+ HSYPYDWRTK+PV+++AS+QWFI+T +K +A
Sbjct: 416 LQAAGAVVKEEDCVHSYPYDWRTKQPVVIRASRQWFINTATLKDKA 461
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 111/178 (62%), Gaps = 10/178 (5%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQH 1152
+ V H NL + +G+++ AG L+ +++ EG V+ +++ V+ E+ H
Sbjct: 371 YSVATHFNLPVECMVDEEGRFTELAGAELQNKSVMDEGNAAVISVLQAAGAVVKEEDCVH 430
Query: 1153 SYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWC 1212
SYPYDWRTK+PV+++AS+QWFI+T +K +A L+ V +PESA+ SL + +R YWC
Sbjct: 431 SYPYDWRTKQPVVIRASRQWFINTATLKDKAKDALQKVRVIPESARSSLLSMLDRRTYWC 490
Query: 1213 ISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
ISRQR WGVPIPVFY +T ++N+ + H + E G D WW+ PVE L T DV
Sbjct: 491 ISRQRSWGVPIPVFYHKETGEPLLNKHTVTHIAKVFSEKGSDSWWTEPVETFL-TPDV 547
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYCD + R S L I + R++AP++PHLAEEVY H P
Sbjct: 769 SIIKDRLYCDPEDSVGRRSCQTVLEEILDGVSRSIAPVLPHLAEEVYLHAP 819
>gi|296230059|ref|XP_002760545.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Callithrix
jacchus]
Length = 1009
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/623 (42%), Positives = 378/623 (60%), Gaps = 49/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K +K + A L++ ++ + L+WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSSKLASLIDSSSPVSFLVWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A V ++ +T + + F G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDFYILAADKVASVASALETTFETISTFSGVDLENGTCRHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPMDCLVNEDGIFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQR WGVPIPVF+ D ++N
Sbjct: 490 TTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRTWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSGISWS
Sbjct: 550 IEHIVKLVEQHGSDIWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGISWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + G KMSKS
Sbjct: 609 YVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVAARKKAPYKTVVVHGFTL---GEKMSKS 665
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNV+S + G Q K P YG DVLRWWV A ++
Sbjct: 666 LGNVLSPDVVINGG--------------------QDQSKEPPYGADVLRWWV-AESNVFT 704
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 705 EVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 764
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 765 NKITELYKQYDFGKVVRLLQTFYTRELSNFYFSVIKDRLYCEKENDPKRRSCQTALVEIL 824
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEE + H+P
Sbjct: 825 DVIVRSFAPILPHLAEEAFQHIP 847
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/430 (46%), Positives = 282/430 (65%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMTGSKIH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEVKVLSELGGEAQNLSAIEIREKARSFAKAAIEKQKLAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY TFD +Y QL FY +Y++ +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYFTFDGKYEAKQLRNFYQMYEKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K +K + A L++ ++ + L+WTT PW++PANQ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSSKLASLIDSSSPVSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V S+ +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DFYILAADKVASVASALETTFETISTFSGVDLENGTCRHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHNLPMDCLVNEDGIFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK T +L +V
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK------TTAKELLKKVK 500
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 501 FI---PGSAL 507
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVNEDGIFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA ++ + + +RPYWCISRQR WGVPIPV
Sbjct: 475 IRASKQWFINIADIKTTAKELLKKVKFIPGSALNAMVEMMDRRPYWCISRQRTWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDIWWTLPPEQLL 574
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
S+ K LYC+ N R S L I V++R+ API+PHLAEE + H+P
Sbjct: 797 SVIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEAFQHIP 847
>gi|198464541|ref|XP_001353264.2| GA18866 [Drosophila pseudoobscura pseudoobscura]
gi|198149764|gb|EAL30767.2| GA18866 [Drosophila pseudoobscura pseudoobscura]
Length = 919
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/625 (41%), Positives = 376/625 (60%), Gaps = 60/625 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +HIS S+Y++ LN + + +AL+WTTTPW+LP+NQ I FN
Sbjct: 219 TALAEAELEYDANHISPSVYVRFALNPSGLEVETKGSQTYALVWTTTPWTLPSNQAICFN 278
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+LEY + + N ++A L+ + + Q +VV PG L +TY HPI+KE
Sbjct: 279 GSLEYVLVRLLDRNPSELYLMASALLSAFEASTQLKCEVVQTLPGSSLSTLTYKHPIDKE 338
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q L A V SKGTGLVH APAHG +DFL++L +KIPV ++ G Y+ +A L
Sbjct: 339 QTHLPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSLDKKIPVKCMVNEAGAYTMEAPSFL 398
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ + +HSY DWRTK+PVI++AS+QWFI+T+R+K A
Sbjct: 399 RGQSVLEQGNPLVLQHIAEDVIHSAKLEHSYRIDWRTKQPVIIRASEQWFINTDRLKSRA 458
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
LE+V+ P E++K+ + Q+ +RPYWCISRQR WGVPIPV Y + +++N A
Sbjct: 459 AGALEQVDVYPRTNAEASKRAMLTQLQKRPYWCISRQRAWGVPIPVLYSRKSGQVVLNAA 518
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLN---TSDVN---SNVTKSNDILDIWFDSGISWS 760
I+H C+L+ G DFWWS S+E LL +D+ ++ K +DILDIWFDSG +WS
Sbjct: 519 LIEHLCSLLRSQGSMDFWWSRSLEDLLPPQIAADLGYEVKDLVKGSDILDIWFDSGSTWS 578
Query: 761 HVLK-DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VLK ++ A +Y+EG DQ GWF SSLLTS+A + AP++ +F+HGF VDEKG KMSKS+
Sbjct: 579 AVLKKEQVADLYLEGYDQFTGWFQSSLLTSIAARDCAPYKALFVHGFTVDEKGHKMSKSL 638
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI S IT+ YG D LRWWVA+H ++ +
Sbjct: 639 GNVI-----------------------SPKQITK------KYGTDALRWWVASHGTQHTS 669
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVL-HNHSESTGSISR------YVDVYMLKRLCE 932
+ + +L + +++ K+R +LRYL GV+ E + + +++ Y+L L +
Sbjct: 670 ITVSDKLLQKAAENLSKVRGTLRYLKGVIGEKQREGREELEQPILDASFLNKYLLSNLLD 729
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEAR--LSGLHTL 990
F++ ++ LY ++Y R + NF+ N++S+ Y L+KDRLYC G+ R L+ TL
Sbjct: 730 FESEIEKLYNAYEYNRVVACIQNFIANQVSSIYVHLIKDRLYC----GDDRELLAIRQTL 785
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSH 1015
+ + L +++ PI P L EE +S+
Sbjct: 786 THCYRQLCKSLWPIAPFLVEESWSY 810
Score = 369 bits (948), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/384 (48%), Positives = 253/384 (65%), Gaps = 6/384 (1%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI 77
KP F+LHDGPPYANG H+GHAVNKILKDITLR + +G++V+Y+ A
Sbjct: 76 KPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVTRGQKVNYIXXXXXXXXXXXXXA- 134
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NCYHTFDKEYVKNQLCQ 136
TS + S +IR+K++ FALE I +QK EF SWG+LA+W+ N Y TF E+++NQL
Sbjct: 135 TSAAEGQSAAEIRQKSRAFALEAIKSQKEEFSSWGILANWQKDNIYTTFHPEFIENQLQM 194
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F+NLY+ +YRDLKPVYWSPSSRTALAE+ELEY +H+S S+Y++ LN +
Sbjct: 195 FHNLYESGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVYVRFALNPSGLEVETKG 254
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVESLKWTFQTD 252
+ +AL+WTTTPW+LP+NQ I FN +LEY + + N ++A L+ + + + Q
Sbjct: 255 SQTYALVWTTTPWTLPSNQAICFNGSLEYVLVRLLDRNPSELYLMASALLSAFEASTQLK 314
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
EVV PG L +TY HPI+KEQ L A V SKGTGLVH APAHG +DFL++L
Sbjct: 315 CEVVQTLPGSSLSTLTYKHPIDKEQTHLPFFDASHVQDSKGTGLVHTAPAHGPEDFLVSL 374
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWR 372
+KIPV ++ G Y+ +A L G ++L G VL + DV+ + +HSY DWR
Sbjct: 375 DKKIPVKCMVNEAGAYTMEAPSFLRGQSVLEQGNPLVLQHIAEDVIHSAKLEHSYRIDWR 434
Query: 373 TKKPVILKASQQWFIDTERIKPEA 396
TK+PVI++AS+QWFI+T+R+K A
Sbjct: 435 TKQPVIIRASEQWFINTDRLKSRA 458
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 106/163 (65%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
++ G Y+ +A L G ++L +G VL + DV+ + +HSY DWRTK+PVI++
Sbjct: 383 MVNEAGAYTMEAPSFLRGQSVLEQGNPLVLQHIAEDVIHSAKLEHSYRIDWRTKQPVIIR 442
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+T+R+K A LE V+ P E++K+++ Q+ +RPYWCISRQR WGVPI
Sbjct: 443 ASEQWFINTDRLKSRAAGALEQVDVYPRTNAEASKRAMLTQLQKRPYWCISRQRAWGVPI 502
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PV Y + +++N A I+H C+L+ G DFWWS +E LL
Sbjct: 503 PVLYSRKSGQVVLNAALIEHLCSLLRSQGSMDFWWSRSLEDLL 545
>gi|194227336|ref|XP_001488103.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Equus caballus]
Length = 1012
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/632 (41%), Positives = 378/632 (59%), Gaps = 46/632 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G+ + L+WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSPPVSFLVWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y++ S G I+A V ++ +T +V+ F G L+ T HP+
Sbjct: 311 CYMPESKYALVKCSKSGDLYILAADKVTSVASVLETTFEVISTFSGVDLESGTCTHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
E+ LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G ++ AGP
Sbjct: 371 EKVS-PLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++ +K
Sbjct: 430 LQNKAVLEEGTDVVIKMLQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNLTDVK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P +A + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 TTAKELLKKVKFIPGAALNAMVEMLDRRPYWCISRQRVWGVPIPVFHHKTKDEFLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SW
Sbjct: 550 IEHIIKLVEQHGSDVWWTLPPEQLL-PKEVLSQVGGPDALEYVPGQDILDIWFDSGTSWF 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
VL D+ A +Y+EG DQ+ GWF SSLLTSVA + APF+ V +HGF + EKG KMSKS
Sbjct: 609 SVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVAARKKAPFKTVVVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNV+ + G Q K P YG DVLRWWV A ++
Sbjct: 669 LGNVVDPDVVINGG--------------------QDQSKEPPYGADVLRWWV-AESNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQ 934
V IG ++LN+++DD+ K+R++LR+LLG + + T SI + YV D YML L +
Sbjct: 708 EVTIGPSVLNAARDDISKLRNTLRFLLGNVTGFNPETDSIPVNNMYVIDQYMLHLLQDLA 767
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + Y ++ + + R+L F ELS FYF+++KDRLYC++ R S L I
Sbjct: 768 NKITDSYKQYDFGKVIRLLQAFYTRELSNFYFSIIKDRLYCENAEDPKRRSCQTALAQIL 827
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
V++R+ API+PHLAEEV+ H+P + S F
Sbjct: 828 DVMVRSFAPILPHLAEEVFQHIPYSKEPKSVF 859
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 278/430 (64%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMRGSKIH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIELK ++ K + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIELKVLSELGGKAQNLSAVEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY TFD Y QL FY +Y + IYR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYCTFDGSYEARQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G+ + L+WTT PW++PANQ + + P +Y++ S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSPPVSFLVWTTQPWTIPANQAVCYMPESKYALVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V S+ +T EV+ F G L+ T HP+ E+ LLPA V+ +K
Sbjct: 328 DLYILAADKVTSVASVLETTFEVISTFSGVDLESGTCTHPLIPEKVS-PLLPANHVTMTK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A + L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ ++L E HSYPYDWRTKKPV+++AS+QWF++ +K T +L +V
Sbjct: 447 LQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNLTDVK------TTAKELLKKVK 500
Query: 411 ITHDRPGTAL 420
PG AL
Sbjct: 501 FI---PGAAL 507
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 107/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQAAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ +K A L+ V F+P +A ++ + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFVNLTDVKTTAKELLKKVKFIPGAALNAMVEMLDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEFLINSQTIEHIIKLVEQHGSDVWWTLPPEQLL 574
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
SI K LYC++ R S L I V++R+ API+PHLAEEV+ H+P + S F
Sbjct: 800 SIIKDRLYCENAEDPKRRSCQTALAQILDVMVRSFAPILPHLAEEVFQHIPYSKEPKSVF 859
>gi|345329562|ref|XP_001511676.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 1007
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/622 (42%), Positives = 370/622 (59%), Gaps = 44/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+S+Y++ L P A LL+G++ + LIWTT PW++PANQ +
Sbjct: 246 TALAEAELEYVPEHVSRSVYVRFPLLNPPPQLASLLDGSSPVSVLIWTTQPWTIPANQAV 305
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P L+YS+ S G I+ V ++ TF T +V+ F G L+ + HP
Sbjct: 306 CYMPKLKYSLVKCSNSGELYILGAERVGSVAATFGTKFEVISTFVGADLESGSCAHP-TI 364
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R LLPA V+ + GTGLVH APAHG +D+ +A K+ + L+ G ++ AG
Sbjct: 365 PGRVSPLLPANHVTMTAGTGLVHTAPAHGMEDYSVASDHKLSMDCLVDENGVFTEGAGSE 424
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ ++L +G D V+ +++ ++L E + HSYPYDWRTKKPVI++AS+QWF++ IK
Sbjct: 425 LQNKSVLEEGTDIVIKMLQSASNLLKEEKFIHSYPYDWRTKKPVIIRASKQWFVNISDIK 484
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQR WGVPIPVFY D ++N
Sbjct: 485 ATAKELLKKVKFIPGSAMNGMLEMMDRRPYWCISRQRCWGVPIPVFYHKTKDEFLLNSQT 544
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN-------VTKSNDILDIWFDSGISWSH 761
++H L+++HG D WW+L EQLL V + DILDIWFDSG SW+H
Sbjct: 545 MEHVIKLVEQHGSDVWWTLPPEQLLPKEIVTQSGGPDGLEYVPGQDILDIWFDSGTSWAH 604
Query: 762 VLKD--KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+D + A VYMEG DQ+ GWF SSL+TS+A + P++ V +HGF + EKG KMSKS+
Sbjct: 605 VLQDTGQSADVYMEGKDQLGGWFQSSLITSIATRKKVPYKTVVVHGFTLGEKGEKMSKSL 664
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ I G Q K P YG DVLRWWV A ++
Sbjct: 665 GNVVDPDVIINGG--------------------QDHSKDPPYGADVLRWWV-ADSNVFAD 703
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQN 935
V IG L ++++DV K+R+++R+LLG L + T SI +D +ML L +F N
Sbjct: 704 VTIGSASLAAAREDVNKLRNTVRFLLGNLAGFNPETESIPTEEMYVIDQFMLHLLQDFAN 763
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++ + + R L F ELS FYF+++KDRLYC+ R S L I
Sbjct: 764 KVTEAYKQYDFGKVIRQLQVFQNRELSKFYFSIIKDRLYCEGEKDPKRRSCQTVLAEILD 823
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ HLP
Sbjct: 824 VVVRSFAPILPHLAEEVFQHLP 845
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/406 (49%), Positives = 275/406 (67%), Gaps = 13/406 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K +F LHDGPPYANG PHIGHA+NKILKDI R ++++G +VH
Sbjct: 85 KCGFSELYSWQRER-KSKEDFCLHDGPPYANGDPHIGHALNKILKDIANRFHMMRGSKVH 143
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
YVPGWDCHGLPIELKA++ + LSP++IR+KA+ FA I QK+ F WGV+ADW
Sbjct: 144 YVPGWDCHGLPIELKALSEFGGDTQSLSPMEIREKAREFAKAAIAKQKSAFIRWGVMADW 203
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+ NCY+TFD +Y QL F+ +Y + +YRD KPV+WSPS+RTALAE+ELEY P+HVS+
Sbjct: 204 D-NCYYTFDGKYEARQLKVFHQMYDKGLVYRDFKPVFWSPSARTALAEAELEYVPEHVSR 262
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
S+Y++ L P A LL+G++ + LIWTT PW++PANQ + + P L+YS+ S G
Sbjct: 263 SVYVRFPLLNPPPQLASLLDGSSPVSVLIWTTQPWTIPANQAVCYMPKLKYSLVKCSNSG 322
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+ V S+ TF T EV+ F G L+ + HP R LLPA V+ +
Sbjct: 323 ELYILGAERVGSVAATFGTKFEVISTFVGADLESGSCAHP-TIPGRVSPLLPANHVTMTA 381
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A K+ + L+ G ++ AG L+ ++L +G D V+ +
Sbjct: 382 GTGLVHTAPAHGMEDYSVASDHKLSMDCLVDENGVFTEGAGSELQNKSVLEEGTDIVIKM 441
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++ ++L E + HSYPYDWRTKKPVI++AS+QWF++ IK A
Sbjct: 442 LQSASNLLKEEKFIHSYPYDWRTKKPVIIRASKQWFVNISDIKATA 487
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AG L+ ++L EG D V+ +++ ++L E + HSYPYDWRTKKPVI
Sbjct: 410 LVDENGVFTEGAGSELQNKSVLEEGTDIVIKMLQSASNLLKEEKFIHSYPYDWRTKKPVI 469
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P SA + + + +RPYWCISRQR WGVPIPV
Sbjct: 470 IRASKQWFVNISDIKATAKELLKKVKFIPGSAMNGMLEMMDRRPYWCISRQRCWGVPIPV 529
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY D ++N ++H L+++HG D WW+LP EQLL
Sbjct: 530 FYHKTKDEFLLNSQTMEHVIKLVEQHGSDVWWTLPPEQLL 569
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ R S L I V++R+ API+PHLAEEV+ HLP
Sbjct: 795 SIIKDRLYCEGEKDPKRRSCQTVLAEILDVVVRSFAPILPHLAEEVFQHLP 845
>gi|345797961|ref|XP_536121.3| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial, partial [Canis
lupus familiaris]
Length = 963
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/632 (41%), Positives = 375/632 (59%), Gaps = 46/632 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + L++G++ + L+WTT W++PANQ +
Sbjct: 202 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLVSLIDGSSPVSFLVWTTQAWTIPANQAV 261
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y++ S G ++A V ++ +T +V+ F G L+ T HP+
Sbjct: 262 CYMPDSKYAIVKCSTSGDLYVLAADKVTSVASALETTFEVISTFSGADLEGGTCAHPLIP 321
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P L+ G ++ AGP
Sbjct: 322 DKAS-PLLPASHVTMTKGTGLVHTAPAHGMEDYSVASQHNLPTDCLVDEDGVFTDVAGPK 380
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +L E HSYPYDWRTKKPV+++AS+QWF++ IK
Sbjct: 381 LQNKAVLEEGTDVVIKMLQAAKHLLKEERLVHSYPYDWRTKKPVVIRASKQWFVNITDIK 440
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 441 ATAKELLKKVKFIPGSALNAMVETMDRRPYWCISRQRVWGVPIPVFHHKTKDEFLINSQT 500
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSN--------DILDIWFDSGISWS 760
+H L+++HG D WW+L EQLL +V S V ++ DILDIWFDSG SWS
Sbjct: 501 TEHIIKLVEQHGSDVWWTLPPEQLL-PKEVLSQVGGADALEYVPGQDILDIWFDSGTSWS 559
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + APF+ V +HGF + EKG KMSKS
Sbjct: 560 YVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPFKTVVVHGFTLGEKGEKMSKS 619
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q P YG DVLRWWV A ++
Sbjct: 620 LGNVIDPDVVINGG--------------------QDQSAEPPYGADVLRWWV-AESNVFT 658
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V I ++LN+++DD+ K+R++LR+LLG + + T SI +D YML L +
Sbjct: 659 EVTISPSVLNAARDDISKLRNTLRFLLGNVAGFNPETDSIPVNNMHVIDQYMLHLLQDLA 718
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + Y ++ + + R+L F ELS FYF+++KDRLYC+ R S L I
Sbjct: 719 NKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYCEKAGDPKRRSCQTALAEIL 778
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
V++R+ API+PHLAEEV+ H+P + S F
Sbjct: 779 DVMVRSFAPILPHLAEEVFQHVPYAKEPKSVF 810
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/430 (46%), Positives = 281/430 (65%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G +VH
Sbjct: 41 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKVH 99
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IRKKA++FA I Q++ F WGV+ADW
Sbjct: 100 FVPGWDCHGLPIEIKVLSELGGKAQNLSAVEIRKKARSFAEAAIKKQRSAFIRWGVMADW 159
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y++ +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 160 -NNCYYTFDGKYEAKQLRIFYQMYEKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 218
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + L++G++ + L+WTT W++PANQ + + P +Y++ S G
Sbjct: 219 SIYVKFPLLKPSPKLVSLIDGSSPVSFLVWTTQAWTIPANQAVCYMPDSKYAIVKCSTSG 278
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A V S+ +T EV+ F G L+ T HP+ ++ LLPA V+ +K
Sbjct: 279 DLYVLAADKVTSVASALETTFEVISTFSGADLEGGTCAHPLIPDKAS-PLLPASHVTMTK 337
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 338 GTGLVHTAPAHGMEDYSVASQHNLPTDCLVDEDGVFTDVAGPKLQNKAVLEEGTDVVIKM 397
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ +L E HSYPYDWRTKKPV+++AS+QWF++ IK T +L +V
Sbjct: 398 LQAAKHLLKEERLVHSYPYDWRTKKPVVIRASKQWFVNITDIK------ATAKELLKKVK 451
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 452 FI---PGSAL 458
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +L E HSYPYDWRTKKPV+
Sbjct: 366 LVDEDGVFTDVAGPKLQNKAVLEEGTDVVIKMLQAAKHLLKEERLVHSYPYDWRTKKPVV 425
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P SA ++ + + +RPYWCISRQRVWGVPIPV
Sbjct: 426 IRASKQWFVNITDIKATAKELLKKVKFIPGSALNAMVETMDRRPYWCISRQRVWGVPIPV 485
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+LP EQLL
Sbjct: 486 FHHKTKDEFLINSQTTEHIIKLVEQHGSDVWWTLPPEQLL 525
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
SI K LYC+ R S L I V++R+ API+PHLAEEV+ H+P + S F
Sbjct: 751 SIIKDRLYCEKAGDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHVPYAKEPKSVF 810
>gi|195378831|ref|XP_002048185.1| GJ13824 [Drosophila virilis]
gi|194155343|gb|EDW70527.1| GJ13824 [Drosophila virilis]
Length = 946
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/622 (42%), Positives = 373/622 (59%), Gaps = 56/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY IS S+YL+ LN + A ++AL+WTTTPW+LP+NQ I +N
Sbjct: 215 TALAEAELEYDAKFISPSVYLRCALNGLSAIEAAQGKQIYALVWTTTPWTLPSNQAICYN 274
Query: 478 PALEYSVASV--KGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
AL+Y + + +G N ++A L+ + + + Q ++V G L D +Y HPI+K
Sbjct: 275 SALDYVLVRLLDRGPNELYLMATALIADFEASTQLQCEIVERLAGSALSDCSYQHPIDKT 334
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q L A V SKGTGLVH APAHG DDFL++LA+K+PV + G Y+ +A L
Sbjct: 335 QTKLPFFDATHVQESKGTGLVHTAPAHGPDDFLISLAKKLPVKCYVNESGVYTEEAPAFL 394
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G ++L G VL + DV+ ++HSYP DWRTK+PVI++AS+QWFI+T+++K A
Sbjct: 395 RGQSVLAQGNPLVLQHIAEDVVHASKFEHSYPIDWRTKQPVIIRASEQWFINTDKLKAPA 454
Query: 654 LACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEA 707
A LE+V+ P ES+KK L Q+ +RPYWCISRQR WGVPIPV Y D + +++N A
Sbjct: 455 AAALEQVDIYPRANAESSKKALLTQLHKRPYWCISRQRAWGVPIPVLYRRDNNQVVLNAA 514
Query: 708 NIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVN------SNVTKSNDILDIWFDSGISWS 760
I+H C L+ G DFWWS +E+LL + + + K NDI DIWFDSG +WS
Sbjct: 515 LIEHLCGLLRTEGSMDFWWSKPLEELLPADLLKKLGCEANQLIKGNDIFDIWFDSGSTWS 574
Query: 761 HVLKDKP---AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
VLK++ A +Y+EG DQ GWF SSLL S+A ++ AP+R +F+HGF VDEKG KMSK
Sbjct: 575 AVLKEQSQQVADLYLEGYDQFTGWFQSSLLMSIAARNCAPYRALFVHGFTVDEKGHKMSK 634
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI S IT+ YG DVLRWWVA H ++
Sbjct: 635 SLGNVI-----------------------SPKQITK------KYGTDVLRWWVAFHGTQH 665
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVL----HNHSESTGSISRYVDVYMLKRLCEF 933
++ + +L S +++ K+R +LRYL GV+ H S+ T + S Y++ Y+L L F
Sbjct: 666 MSITVSDKLLQQSAENLSKVRGTLRYLNGVINQKEHKLSDPTLNDS-YLNKYLLHNLLGF 724
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + LY ++Y R + NF+ N++S Y L+KDRLYC N + + +TL +
Sbjct: 725 EQEIHKLYNGYEYNRVVASIQNFIANQVSGIYVHLIKDRLYCG--NNQELQAIRYTLSHC 782
Query: 994 FHVLLRTVAPIMPHLAEEVYSH 1015
+ L + + PI P+L EE +S+
Sbjct: 783 YRQLCKALWPITPYLIEESWSY 804
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/381 (51%), Positives = 265/381 (69%), Gaps = 5/381 (1%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI 77
KP F+LHDGPPYANG H+GHAVNKILKDITLR ++ G++V+Y+PGWDCHGLPIELKA
Sbjct: 71 KPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVVHGQQVNYIPGWDCHGLPIELKAS 130
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE-HNCYHTFDKEYVKNQLCQ 136
+S + LDIR+K+ FALE I +QKAEF SWG+LA+W+ + Y TF E++ NQL
Sbjct: 131 SSAAGDQNALDIRQKSCAFALEAIESQKAEFRSWGILANWQPEDIYLTFRPEFIANQLHM 190
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
FYNLY++ ++YRDLKPVYWSPSS+TALAE+ELEY +S S+YL+ LN + A
Sbjct: 191 FYNLYERGFVYRDLKPVYWSPSSKTALAEAELEYDAKFISPSVYLRCALNGLSAIEAAQG 250
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--KGAN--VIVAKCLVESLKWTFQTD 252
++AL+WTTTPW+LP+NQ I +N AL+Y + + +G N ++A L+ + + Q
Sbjct: 251 KQIYALVWTTTPWTLPSNQAICYNSALDYVLVRLLDRGPNELYLMATALIADFEASTQLQ 310
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
E+V G L D +Y HPI+K Q L A V SKGTGLVH APAHG DDFL++L
Sbjct: 311 CEIVERLAGSALSDCSYQHPIDKTQTKLPFFDATHVQESKGTGLVHTAPAHGPDDFLISL 370
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWR 372
A+K+PV + G Y+ +A L G ++L G VL + DV+ ++HSYP DWR
Sbjct: 371 AKKLPVKCYVNESGVYTEEAPAFLRGQSVLAQGNPLVLQHIAEDVVHASKFEHSYPIDWR 430
Query: 373 TKKPVILKASQQWFIDTERIK 393
TK+PVI++AS+QWFI+T+++K
Sbjct: 431 TKQPVIIRASEQWFINTDKLK 451
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 114/176 (64%), Gaps = 7/176 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ G Y+ +A L G ++L +G VL + DV+ ++HSYP DWRTK+PVI++A
Sbjct: 380 VNESGVYTEEAPAFLRGQSVLAQGNPLVLQHIAEDVVHASKFEHSYPIDWRTKQPVIIRA 439
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
S+QWFI+T+++K A A LE V+ P ES+KK+L Q+ +RPYWCISRQR WGVPIP
Sbjct: 440 SEQWFINTDKLKAPAAAALEQVDIYPRANAESSKKALLTQLHKRPYWCISRQRAWGVPIP 499
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLLNTSDVNSNVTKSNQ 1277
V Y D + +++N A I+H C L+ G DFWWS P+E+LL + ++NQ
Sbjct: 500 VLYRRDNNQVVLNAALIEHLCGLLRTEGSMDFWWSKPLEELLPADLLKKLGCEANQ 555
>gi|344236435|gb|EGV92538.1| Isoleucyl-tRNA synthetase, mitochondrial [Cricetulus griseus]
Length = 835
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/622 (41%), Positives = 369/622 (59%), Gaps = 44/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY++ L Q P A L +G++ + LIWTT PW++PANQ +
Sbjct: 74 TALAEAELEYNPEHVSRSIYVRFPLLQPPPKLASLTDGSSPVSFLIWTTQPWTIPANQAV 133
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A+ + + +T +V+ F G L+ T HP+
Sbjct: 134 CYMPEAKYAVVKCSSSGDIYILAEDKISPVASALETTFEVISTFSGVDLEGGTCSHPLIP 193
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 194 DKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPMDCLVDEDGVFTDAAGPE 252
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
LE +L +G D V+ +++ +L E HSYP DWRTKKPV+++AS+QWFI+ + IK
Sbjct: 253 LENKAVLEEGTDVVIKMLQTAKHLLKEEKVVHSYPCDWRTKKPVVIRASKQWFINIKDIK 312
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L+ V F+P +A + D + +RPYWCISRQR WGVPIPVF+ D ++N
Sbjct: 313 ATAKELLKTVKFIPGAALNGMVDLLDRRPYWCISRQRAWGVPIPVFHHKTKDEYLINSQT 372
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
I+H L++EHG D WW+L E+LL V DILDIWFDSG SW
Sbjct: 373 IEHITKLVEEHGSDVWWTLPPERLLPEDVVAQAGGPDALEYVPGQDILDIWFDSGTSWFC 432
Query: 762 VL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL ++ A +Y+EG DQ+ GWF SSLLT VA K APF+ V +HGF + EKG KMSKS+
Sbjct: 433 VLPGTEQRADLYLEGKDQLGGWFQSSLLTRVATKTKAPFKTVMVHGFTLGEKGEKMSKSL 492
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI+ I G K K P YG D LRWW+ A ++
Sbjct: 493 GNVINPDTIINGGKD--------------------PSKEPPYGADALRWWI-AESNVFTE 531
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V IG + L++++DD+ K+R++LR+LLG + + T S+ +D YML + +F
Sbjct: 532 VAIGPSALSAARDDISKLRNTLRFLLGNVAGFNPETDSVPVKDMYVIDQYMLHLIQDFST 591
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++ + + R+L F ELS+FYF++VKDRLYC+S R S L I
Sbjct: 592 KVTDSYKQYDFGKVIRLLKAFYTRELSSFYFSIVKDRLYCESEKDPKRRSCQTALAEILD 651
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
VL+R+ API+PHLAEEV+ H+P
Sbjct: 652 VLVRSFAPILPHLAEEVFQHIP 673
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 210/329 (63%), Gaps = 10/329 (3%)
Query: 87 LDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYI 146
++IR+KA++FA I QK+ F WGV+ADW +NCY+TFD +Y QL FY +Y + +
Sbjct: 1 MEIREKARSFAKAAIEKQKSAFARWGVMADW-NNCYYTFDAKYEAKQLRLFYQMYDKGLV 59
Query: 147 YRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP---AHLLEGATDLHALI 203
YR KPV+WSPSSRTALAE+ELEY P+HVS+SIY++ L Q P A L +G++ + LI
Sbjct: 60 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVRFPLLQPPPKLASLTDGSSPVSFLI 119
Query: 204 WTTTPWSLPANQFIAFNPALEYSV--ASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPG 261
WTT PW++PANQ + + P +Y+V S G I+A+ + + +T EV+ F G
Sbjct: 120 WTTQPWTIPANQAVCYMPEAKYAVVKCSSSGDIYILAEDKISPVASALETTFEVISTFSG 179
Query: 262 QYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNL 321
L+ T HP+ ++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L
Sbjct: 180 VDLEGGTCSHPLIPDKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPMDCL 238
Query: 322 ITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 379
+ G ++ AGP LE +L +G D V+ +++ +L E HSYP DWRTKKPV++
Sbjct: 239 VDEDGVFTDAAGPELENKAVLEEGTDVVIKMLQTAKHLLKEEKVVHSYPCDWRTKKPVVI 298
Query: 380 KASQQWFIDTERIKPEAL-VCKTVGNILG 407
+AS+QWFI+ + IK A + KTV I G
Sbjct: 299 RASKQWFINIKDIKATAKELLKTVKFIPG 327
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP LE +L EG D V+ +++ +L E HSYP DWRTKKPV+
Sbjct: 238 LVDEDGVFTDAAGPELENKAVLEEGTDVVIKMLQTAKHLLKEEKVVHSYPCDWRTKKPVV 297
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ + IK A L+ V F+P +A + D + +RPYWCISRQR WGVPIPV
Sbjct: 298 IRASKQWFINIKDIKATAKELLKTVKFIPGAALNGMVDLLDRRPYWCISRQRAWGVPIPV 357
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L++EHG D WW+LP E+LL
Sbjct: 358 FHHKTKDEYLINSQTIEHITKLVEEHGSDVWWTLPPERLL 397
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+S R S L I VL+R+ API+PHLAEEV+ H+P
Sbjct: 623 SIVKDRLYCESEKDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQHIP 673
>gi|354465154|ref|XP_003495045.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Cricetulus
griseus]
Length = 1136
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/622 (41%), Positives = 369/622 (59%), Gaps = 44/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY++ L Q P A L +G++ + LIWTT PW++PANQ +
Sbjct: 375 TALAEAELEYNPEHVSRSIYVRFPLLQPPPKLASLTDGSSPVSFLIWTTQPWTIPANQAV 434
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A+ + + +T +V+ F G L+ T HP+
Sbjct: 435 CYMPEAKYAVVKCSSSGDIYILAEDKISPVASALETTFEVISTFSGVDLEGGTCSHPLIP 494
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 495 DKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPMDCLVDEDGVFTDAAGPE 553
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
LE +L +G D V+ +++ +L E HSYP DWRTKKPV+++AS+QWFI+ + IK
Sbjct: 554 LENKAVLEEGTDVVIKMLQTAKHLLKEEKVVHSYPCDWRTKKPVVIRASKQWFINIKDIK 613
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L+ V F+P +A + D + +RPYWCISRQR WGVPIPVF+ D ++N
Sbjct: 614 ATAKELLKTVKFIPGAALNGMVDLLDRRPYWCISRQRAWGVPIPVFHHKTKDEYLINSQT 673
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
I+H L++EHG D WW+L E+LL V DILDIWFDSG SW
Sbjct: 674 IEHITKLVEEHGSDVWWTLPPERLLPEDVVAQAGGPDALEYVPGQDILDIWFDSGTSWFC 733
Query: 762 VL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL ++ A +Y+EG DQ+ GWF SSLLT VA K APF+ V +HGF + EKG KMSKS+
Sbjct: 734 VLPGTEQRADLYLEGKDQLGGWFQSSLLTRVATKTKAPFKTVMVHGFTLGEKGEKMSKSL 793
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI+ I G K K P YG D LRWW+ A ++
Sbjct: 794 GNVINPDTIINGGKD--------------------PSKEPPYGADALRWWI-AESNVFTE 832
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V IG + L++++DD+ K+R++LR+LLG + + T S+ +D YML + +F
Sbjct: 833 VAIGPSALSAARDDISKLRNTLRFLLGNVAGFNPETDSVPVKDMYVIDQYMLHLIQDFST 892
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++ + + R+L F ELS+FYF++VKDRLYC+S R S L I
Sbjct: 893 KVTDSYKQYDFGKVIRLLKAFYTRELSSFYFSIVKDRLYCESEKDPKRRSCQTALAEILD 952
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
VL+R+ API+PHLAEEV+ H+P
Sbjct: 953 VLVRSFAPILPHLAEEVFQHIP 974
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/418 (49%), Positives = 279/418 (66%), Gaps = 14/418 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE GK EF LHDGPPYANG PHIGHA+NKILKDI R ++++G +VH
Sbjct: 214 KCGFSELYSWQRER-KGKTEFCLHDGPPYANGDPHIGHALNKILKDIANRYHMMRGSKVH 272
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE K ++ + LS ++IR+KA++FA I QK+ F WGV+ADW
Sbjct: 273 FVPGWDCHGLPIETKVLSELGVSAQTLSAMEIREKARSFAKAAIEKQKSAFARWGVMADW 332
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 333 -NNCYYTFDAKYEAKQLRLFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 391
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY++ L Q P A L +G++ + LIWTT PW++PANQ + + P +Y+V S G
Sbjct: 392 SIYVRFPLLQPPPKLASLTDGSSPVSFLIWTTQPWTIPANQAVCYMPEAKYAVVKCSSSG 451
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A+ + + +T EV+ F G L+ T HP+ ++ LLPA V+ +K
Sbjct: 452 DIYILAEDKISPVASALETTFEVISTFSGVDLEGGTCSHPLIPDKVS-PLLPATHVTMAK 510
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP LE +L +G D V+ +
Sbjct: 511 GTGLVHTAPAHGMEDYSVASQHNLPMDCLVDEDGVFTDAAGPELENKAVLEEGTDVVIKM 570
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVGNILG 407
++ +L E HSYP DWRTKKPV+++AS+QWFI+ + IK A + KTV I G
Sbjct: 571 LQTAKHLLKEEKVVHSYPCDWRTKKPVVIRASKQWFINIKDIKATAKELLKTVKFIPG 628
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP LE +L EG D V+ +++ +L E HSYP DWRTKKPV+
Sbjct: 539 LVDEDGVFTDAAGPELENKAVLEEGTDVVIKMLQTAKHLLKEEKVVHSYPCDWRTKKPVV 598
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ + IK A L+ V F+P +A + D + +RPYWCISRQR WGVPIPV
Sbjct: 599 IRASKQWFINIKDIKATAKELLKTVKFIPGAALNGMVDLLDRRPYWCISRQRAWGVPIPV 658
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L++EHG D WW+LP E+LL
Sbjct: 659 FHHKTKDEYLINSQTIEHITKLVEEHGSDVWWTLPPERLL 698
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+S R S L I VL+R+ API+PHLAEEV+ H+P
Sbjct: 924 SIVKDRLYCESEKDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQHIP 974
>gi|410986531|ref|XP_003999563.1| PREDICTED: LOW QUALITY PROTEIN: isoleucine--tRNA ligase,
mitochondrial [Felis catus]
Length = 1012
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/623 (41%), Positives = 369/623 (59%), Gaps = 46/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + L++G++ + L+WTT PW++PANQ +
Sbjct: 250 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLVSLIDGSSPVSFLVWTTQPWTIPANQAV 309
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A V ++ +T ++V+ F G L++ T HP+
Sbjct: 310 CYMPDSKYAVVKCSKSGDLYILAADKVTSIASVLETTLEVISTFSGVDLENGTCTHPLIP 369
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G ++ AGP
Sbjct: 370 GKAS-PLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFTEVAGPE 428
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
LE +L +G D V+ +++ +L E HSYPYDWRTKKPV+++AS+QWF++ IK
Sbjct: 429 LENKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIK 488
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 489 ATAKELLKKVKFIPGSALNAMVETMDRRPYWCISRQRVWGVPIPVFHHKTKDEFLINSQT 548
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
+H L+++HG D WW+ EQLL +V S V DILDIWFDSG SWS
Sbjct: 549 TEHVIKLVEQHGSDVWWTHPPEQLL-PQEVLSQVGGPDALEYVPGQDILDIWFDSGTSWS 607
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
VL D+ A +Y+EG DQ+ GWF SSLLTSVA + APF+ V +HGF + EKG KMSKS
Sbjct: 608 CVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPFKTVVVHGFTLGEKGEKMSKS 667
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG DVLRWWV A ++
Sbjct: 668 LGNVIDPDVVINGG--------------------QDQSKEPPYGADVLRWWV-AESNVFT 706
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V IG LN+++DD+ K+R++LR+LLG + + T +I +D YML L +
Sbjct: 707 EVTIGPAALNAARDDINKLRNTLRFLLGNVSGFNPETDAIPVNDMYVIDQYMLHLLQDLA 766
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + Y ++ + + R+L F ELS FYF+++KDRLYC+S R S L I
Sbjct: 767 NKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYCESAGDPGRRSCQTALAEIL 826
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEE + H+P
Sbjct: 827 DVMVRSFAPILPHLAEEAFQHIP 849
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 282/430 (65%), Gaps = 22/430 (5%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 89 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIH 147
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IR+KA++FA I Q++ F WG++ADW
Sbjct: 148 FVPGWDCHGLPIEIKVLSELGGKAQNLSAVEIREKARSFAAAAIEKQRSAFIRWGIMADW 207
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y++ IYR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 208 -NNCYYTFDGKYEAKQLRLFYQMYEKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 266
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + L++G++ + L+WTT PW++PANQ + + P +Y+V S G
Sbjct: 267 SIYVKFPLLKPSPKLVSLIDGSSPVSFLVWTTQPWTIPANQAVCYMPDSKYAVVKCSKSG 326
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V S+ +T +EV+ F G L++ T HP+ + LLPA V+ +K
Sbjct: 327 DLYILAADKVTSIASVLETTLEVISTFSGVDLENGTCTHPLIPGKAS-PLLPANHVTMTK 385
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A + L+ G ++ AGP LE +L +G D V+ +
Sbjct: 386 GTGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFTEVAGPELENKAVLEEGTDVVIKM 445
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
++ +L E HSYPYDWRTKKPV+++AS+QWF++ IK T +L +V
Sbjct: 446 LQASKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIK------ATAKELLKKVK 499
Query: 411 ITHDRPGTAL 420
PG+AL
Sbjct: 500 FI---PGSAL 506
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP LE +L EG D V+ +++ +L E HSYPYDWRTKKPV+
Sbjct: 414 LVDEDGVFTEVAGPELENKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKPVV 473
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P SA ++ + + +RPYWCISRQRVWGVPIPV
Sbjct: 474 IRASKQWFVNITDIKATAKELLKKVKFIPGSALNAMVETMDRRPYWCISRQRVWGVPIPV 533
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N +H L+++HG D WW+ P EQLL
Sbjct: 534 FHHKTKDEFLINSQTTEHVIKLVEQHGSDVWWTHPPEQLL 573
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+S R S L I V++R+ API+PHLAEE + H+P
Sbjct: 799 SIIKDRLYCESAGDPGRRSCQTALAEILDVMVRSFAPILPHLAEEAFQHIP 849
>gi|312378179|gb|EFR24821.1| hypothetical protein AND_10338 [Anopheles darlingi]
Length = 830
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/624 (41%), Positives = 363/624 (58%), Gaps = 58/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ-------VPAHLLEGATDLHALIWTTTPWSLPA 470
+ALAE+ELEY H+S S+Y+K++L + + A D+HA+IWTTTPW+LPA
Sbjct: 236 SALAEAELEYDEAHVSPSMYVKLRLANRGTDCPTIKSMGFGNAADVHAVIWTTTPWTLPA 295
Query: 471 NQFIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
NQ I +NP+L+YS V SV G ++V K L++ L + + PG L+ + Y HP
Sbjct: 296 NQAICYNPSLDYSLVRSVDGDTLLVGKDLIQYLGEQLGQTFEALQTIPGNELRALRYHHP 355
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
+N ++ L LPAG V + KGTGLVH APAHG DDFL+ L ++ + +LI +G+Y+ A
Sbjct: 356 LNTDEV-LPFLPAGHVKAEKGTGLVHTAPAHGPDDFLVCLEHRMEIKSLINEEGRYNERA 414
Query: 590 GPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
L G L +G V L+ L +HSYP DWRTK+PV+L+AS QWFIDT +
Sbjct: 415 PAPLIGRLALTEGNRIVSELLRLATLHLTTLEHSYPIDWRTKQPVMLRASDQWFIDTSSL 474
Query: 650 KPEALACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTI 702
K AL + +V P E +K+ L Q+ +RPYWCISRQR WGVPIPV YD G +
Sbjct: 475 KQMALEAVRDVEIYPRTSAEVSKRVLEGQLRKRPYWCISRQRAWGVPIPVLYDSRSGQPV 534
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSG 756
+ L+ E DFWW+ VEQL+ + + K NDILDIWFDSG
Sbjct: 535 LHRSLLATLEARLMQESSIDFWWTTPVEQLVPEEMLKELEIPLDCLRKGNDILDIWFDSG 594
Query: 757 ISWSHVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
+SW VL KD+ A +Y+EG+DQ GWF SSLLTSVA + AP++ +F+HGF VDE G KM
Sbjct: 595 VSWCTVLGKDRVADLYLEGIDQFTGWFQSSLLTSVASRGKAPYKAIFVHGFAVDENGMKM 654
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GN+IS I + YG DVLRWWV +HA+
Sbjct: 655 SKSLGNIISPSSI-----------------------------ITKYGCDVLRWWVCSHAT 685
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
+ ++P+ +L SS D VQK+R L++LLG L+ S I ++D Y L++L
Sbjct: 686 QSTSIPVSHKLLTSSADSVQKLRGILKFLLGALNRADTSELEIQTEMLHHIDRYYLQQLV 745
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
+F+ + LY +Q+ RA+ +LNF ++ LS Y +VKDRLYC + A ++ + L
Sbjct: 746 QFRRNVFDLYDAYQHNRATASILNFCLSTLSGLYLHVVKDRLYCGTDQEHAHVTAI--LA 803
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSH 1015
N + L + PI+P L EE +++
Sbjct: 804 NTYQTLCEVLWPIVPFLVEESWTY 827
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/417 (49%), Positives = 266/417 (63%), Gaps = 24/417 (5%)
Query: 4 FSELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
FSELYSW R A K EFILHDGPPYANG H+GHAVNKILKD+ L+ ++ G RVHYV
Sbjct: 64 FSELYSWNRTAPALAKDEFILHDGPPYANGELHMGHAVNKILKDLILKHKIISGSRVHYV 123
Query: 63 PGWDCHGLPIELKAI-----------TSKDKLLSPLDIRKKAKNFALETINTQKAEFESW 111
PGWDCHGLPIELKA+ T + S +IR A+ FALETI Q+ FE+W
Sbjct: 124 PGWDCHGLPIELKALEAFAKKSKKGQTGAGQARSAPEIRDTARRFALETIVKQRKSFEAW 183
Query: 112 GVLADW---EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESEL 168
G+ A W + Y T D Y++ QL FY+LY++ IYR LKPV+WSPSSR+ALAE+EL
Sbjct: 184 GITAAWSDSDRGLYRTLDPAYIREQLRLFYDLYERKLIYRALKPVFWSPSSRSALAEAEL 243
Query: 169 EYKPDHVSKSIYLKIKLNQ-------VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNP 221
EY HVS S+Y+K++L + + A D+HA+IWTTTPW+LPANQ I +NP
Sbjct: 244 EYDEAHVSPSMYVKLRLANRGTDCPTIKSMGFGNAADVHAVIWTTTPWTLPANQAICYNP 303
Query: 222 ALEYS-VASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDL 280
+L+YS V SV G ++V K L++ L E + PG L+ + Y HP+N ++ L
Sbjct: 304 SLDYSLVRSVDGDTLLVGKDLIQYLGEQLGQTFEALQTIPGNELRALRYHHPLNTDEV-L 362
Query: 281 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 340
LPAG V + KGTGLVH APAHG DDFL+ L ++ + +LI +G+Y+ A L G
Sbjct: 363 PFLPAGHVKAEKGTGLVHTAPAHGPDDFLVCLEHRMEIKSLINEEGRYNERAPAPLIGRL 422
Query: 341 ILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L +G V L+ L +HSYP DWRTK+PV+L+AS QWFIDT +K AL
Sbjct: 423 ALTEGNRIVSELLRLATLHLTTLEHSYPIDWRTKQPVMLRASDQWFIDTSSLKQMAL 479
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 93/164 (56%), Gaps = 7/164 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+LI +G+Y+ A L G L EG V L+ L +HSYP DWRTK+PV+L
Sbjct: 402 SLINEEGRYNERAPAPLIGRLALTEGNRIVSELLRLATLHLTTLEHSYPIDWRTKQPVML 461
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+AS QWFIDT +K AL + V P E +K+ L Q+ +RPYWCISRQR WGVP
Sbjct: 462 RASDQWFIDTSSLKQMALEAVRDVEIYPRTSAEVSKRVLEGQLRKRPYWCISRQRAWGVP 521
Query: 1223 IPVFYD---GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IPV YD G ++ L+ E DFWW+ PVEQL+
Sbjct: 522 IPVLYDSRSGQPVLHRSLLATLEARLMQESSIDFWWTTPVEQLV 565
>gi|357611630|gb|EHJ67572.1| hypothetical protein KGM_20740 [Danaus plexippus]
Length = 843
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/615 (42%), Positives = 371/615 (60%), Gaps = 45/615 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD--LHALIWTTTPWSLPANQFIA 475
TALAE+ELEY P+ SK +Y K + +VP + +D + ALIWTTTPW+L AN+ IA
Sbjct: 129 TALAEAELEYDPNFKSKEVYFKFPMEKVPDLVKNVCSDQQIFALIWTTTPWTLVANKAIA 188
Query: 476 FNPALEYSVA--SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+NP++ Y VA S + ++AK ++ L+ I +V +F GQ+L TY N
Sbjct: 189 YNPSMVYCVAKMSKRSELFLIAKDQIQELERVLDCGISIVVEFEGQHLSSTTY----NGL 244
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+ L+P V+S KGTGLVH APAHG DDF++AL I V + G+Y + GP L
Sbjct: 245 SHTMPLIPGPHVTSGKGTGLVHTAPAHGPDDFVVALNNNITVECNVDEHGRYI-NLGPDL 303
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+GL +L +G++ V+ + +++ + HSYP DWRTKKPVIL+AS QWFIDT +K A
Sbjct: 304 DGLYVLQEGQETVMKKLRDSIIYEGIFTHSYPLDWRTKKPVILRASHQWFIDTNALKQTA 363
Query: 654 LACLEEVNFVPES----AKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEANI 709
L L++V +P S +++ R Q+ +RPYWCISRQR WGVPIP Y G+ IIV+E I
Sbjct: 364 LGALDKVAILPPSTADQSRQGFRAQLEKRPYWCISRQRAWGVPIPALYRGNEIIVDEEII 423
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLN---TSDVN-SNVTKSNDILDIWFDSGISWSHVLKD 765
++ C+LID+ G D WW+ V+ L+ + N +TK DI+DIW DSG+SW H L D
Sbjct: 424 ENICSLIDKDGTDVWWTCDVKDLIPKKISEKFNCEEITKGKDIMDIWLDSGLSW-HTL-D 481
Query: 766 KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISA 825
+ AH+Y EG+DQ+ GWF +SLLTS+AL AP+ ++F+HGFVVD+K KMSKS+GN
Sbjct: 482 RKAHLYSEGVDQLTGWFQASLLTSLALNGEAPYESIFVHGFVVDDKKRKMSKSIGN---- 537
Query: 826 HDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKN 885
VI I G KK AYGVD LRWWVA+H+++ + I K
Sbjct: 538 -------------------VIDPKTIIFGDKKNAAYGVDTLRWWVASHSTQHSQIVISKK 578
Query: 886 ILNSSQDDVQKIRSSLRYLLGVLHNHSES---TGSISRYVDVYMLKRLCEFQNTMDTLYG 942
+L Q++V +IR+ ++YLLGV+ + ++ + D YM+ F N + Y
Sbjct: 579 LLEDCQNEVIRIRNIMKYLLGVISDLEKTDFYKNPTLNFFDRYMVTECHSFVNETNHHYD 638
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVA 1002
F+Y ++ +L F+ N++S Y +KDRLYC N + RL+ +H I L + +
Sbjct: 639 NFRYNHVAQNVLYFISNKVSGLYCHCIKDRLYCSMRNSKERLAAQLVIHTILVSLCKGLG 698
Query: 1003 PIMPHLAEEVYSHLP 1017
PI+PHL EEV+ + P
Sbjct: 699 PILPHLIEEVWQYHP 713
Score = 366 bits (939), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 258/401 (64%), Gaps = 15/401 (3%)
Query: 36 IGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI---TSKDKLLSPLDIRKK 92
+GHAVNKI+KDI RS +LQG +VHYVPGWDCHGLPIE KA+ SK++ P+ R+
Sbjct: 1 MGHAVNKIIKDINNRSQILQGNKVHYVPGWDCHGLPIEFKALQKTKSKNEPTDPVQTRQI 60
Query: 93 AKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKP 152
A++FALET+ +QK FESWG++ADWE CY T DK YV++QL FY +YK IY+ LKP
Sbjct: 61 ARSFALETVKSQKEAFESWGIMADWEKQCYLTLDKNYVQSQLRLFYKMYKSGLIYQALKP 120
Query: 153 VYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATD--LHALIWTTTPWS 210
VYWSPSSRTALAE+ELEY P+ SK +Y K + +VP + +D + ALIWTTTPW+
Sbjct: 121 VYWSPSSRTALAEAELEYDPNFKSKEVYFKFPMEKVPDLVKNVCSDQQIFALIWTTTPWT 180
Query: 211 LPANQFIAFNPALEYSVA--SVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDIT 268
L AN+ IA+NP++ Y VA S + ++AK ++ L+ I +V +F GQ+L T
Sbjct: 181 LVANKAIAYNPSMVYCVAKMSKRSELFLIAKDQIQELERVLDCGISIVVEFEGQHLSSTT 240
Query: 269 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 328
Y N + L+P V+S KGTGLVH APAHG DDF++AL I V + G+Y
Sbjct: 241 Y----NGLSHTMPLIPGPHVTSGKGTGLVHTAPAHGPDDFVVALNNNITVECNVDEHGRY 296
Query: 329 SPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 388
+ GP L+GL +L +G++ V+ + +++ + HSYP DWRTKKPVIL+AS QWFID
Sbjct: 297 I-NLGPDLDGLYVLQEGQETVMKKLRDSIIYEGIFTHSYPLDWRTKKPVILRASHQWFID 355
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPGTALAESELEYKP 429
T +K AL IL R G ++LE +P
Sbjct: 356 TNALKQTALGALDKVAILPPSTADQSRQG---FRAQLEKRP 393
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 106/159 (66%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ G+Y + GP L+GL +L EG++ V+ + +++ + HSYP DWRTKKPVIL+A
Sbjct: 290 VDEHGRYI-NLGPDLDGLYVLQEGQETVMKKLRDSIIYEGIFTHSYPLDWRTKKPVILRA 348
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPES----AKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
S QWFIDT +K AL L+ V +P S +++ R Q+ +RPYWCISRQR WGVPIP
Sbjct: 349 SHQWFIDTNALKQTALGALDKVAILPPSTADQSRQGFRAQLEKRPYWCISRQRAWGVPIP 408
Query: 1225 VFYDGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y G+ IIV+E I++ C+LID+ G D WW+ V+ L+
Sbjct: 409 ALYRGNEIIVDEEIIENICSLIDKDGTDVWWTCDVKDLI 447
>gi|327262525|ref|XP_003216074.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Anolis
carolinensis]
Length = 931
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/632 (40%), Positives = 380/632 (60%), Gaps = 46/632 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+S+S+Y+K L + P L ++G ++ +IWTT W++PANQ +
Sbjct: 171 TALAEAELEYNQQHVSRSVYIKFPLLKPPPKLSSVIDGLPAVNLIIWTTQAWTIPANQAV 230
Query: 475 AFNPALEYSVASVK--GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P EYS+ G + I+A V++ T DV+ F G ++ HP
Sbjct: 231 CYMPNSEYSIVKCTNTGEHFIIASDRVQSTAALLDTQFDVISTFKGTDFENGMCSHPTIP 290
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ SKGTGLVH APAHG +D+ +A ++P+ L+ +G+++ AG
Sbjct: 291 GKQS-PLLPANHVTMSKGTGLVHTAPAHGMEDYGVASHHQLPMDCLVDEKGRFTEAAGSE 349
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G + V+ ++ ++L E + HSYPYDWRTKKPVI++AS+QWFIDT +K
Sbjct: 350 LQKKAVLDEGNEAVIQMLHGAKNLLKEEKFVHSYPYDWRTKKPVIIRASKQWFIDTANLK 409
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
A L++V VP S + + + +R +WCISRQR WGVPIPVFY T ++N+ +
Sbjct: 410 SAAQEALKKVKCVPASGMNRMLEMLDRRTFWCISRQRRWGVPIPVFYHKTTGNPLINKKS 469
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTS--------DVNSNVTKSNDILDIWFDSGISWS 760
I++ ++++HG D WW+L +EQLL++ D+N + + D+LDIWFDSG SW+
Sbjct: 470 IENIIKVVEQHGSDGWWTLPIEQLLSSDALAKADSHDINDYI-QGQDVLDIWFDSGTSWA 528
Query: 761 HVLKDK--PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
HVL+D A +Y+EG DQ+ GWF SSLLTSVA + AP++ + +HGF + EKG KMSKS
Sbjct: 529 HVLEDAGITADLYLEGKDQLGGWFQSSLLTSVATQKKAPYKTLVVHGFTLGEKGEKMSKS 588
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNV+ + G GN S P YG D+LRWWV A ++
Sbjct: 589 IGNVVDPDVVING-----------GNDHSTE---------PPYGADILRWWV-AESNVFT 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V IG +LNS+++D+ K+R++LR+LLG L + + T SI +D Y+L L +
Sbjct: 628 EVLIGPAVLNSAREDINKLRNTLRFLLGNLASFNPETDSIPTSDMYLIDQYILHLLHGYA 687
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y E+ Y + R+L F ELS+FYF++VKDRLYC+ R S L +
Sbjct: 688 TKVTQAYKEYDYGKVIRLLEAFHTRELSSFYFSIVKDRLYCEEEKDPKRRSCQTALAAVL 747
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
++R+ API+PHLAEEV+ +LP R+ + S F
Sbjct: 748 DTMVRSFAPILPHLAEEVFQYLPYRKESDSVF 779
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/404 (47%), Positives = 273/404 (67%), Gaps = 11/404 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQR+ K EF LHDGPPYANG H+GHA+NKILKDIT R ++++ VH
Sbjct: 12 KCGFSELYSWQRQR-KTKKEFCLHDGPPYANGDAHVGHALNKILKDITNRFHMMRDYVVH 70
Query: 61 YVPGWDCHGLPIELKAITS-KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
YVPGWDCHGLPIELKA++ ++ LSP++IR+KAK FA + I QK+ F WG++A+W+
Sbjct: 71 YVPGWDCHGLPIELKALSECEEDDLSPMEIRQKAKEFAEKVIEKQKSAFIRWGIMANWD- 129
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
NCYHTFDK+Y QL F+ ++ + Y+Y+D KPV+WSPS+ TALAE+ELEY HVS+S+
Sbjct: 130 NCYHTFDKKYEAKQLHIFHQMFDKGYVYQDYKPVFWSPSTNTALAEAELEYNQQHVSRSV 189
Query: 180 YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--KGAN 234
Y+K L + P L ++G ++ +IWTT W++PANQ + + P EYS+ G +
Sbjct: 190 YIKFPLLKPPPKLSSVIDGLPAVNLIIWTTQAWTIPANQAVCYMPNSEYSIVKCTNTGEH 249
Query: 235 VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGT 294
I+A V+S T +V+ F G ++ HP ++ LLPA V+ SKGT
Sbjct: 250 FIIASDRVQSTAALLDTQFDVISTFKGTDFENGMCSHPTIPGKQS-PLLPANHVTMSKGT 308
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
GLVH APAHG +D+ +A ++P+ L+ +G+++ AG L+ +L +G + V+ ++
Sbjct: 309 GLVHTAPAHGMEDYGVASHHQLPMDCLVDEKGRFTEAAGSELQKKAVLDEGNEAVIQMLH 368
Query: 355 --PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++L E + HSYPYDWRTKKPVI++AS+QWFIDT +K A
Sbjct: 369 GAKNLLKEEKFVHSYPYDWRTKKPVIIRASKQWFIDTANLKSAA 412
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 109/162 (67%), Gaps = 4/162 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ +G+++ AG L+ +L EG + V+ ++ ++L E + HSYPYDWRTKKPVI
Sbjct: 335 LVDEKGRFTEAAGSELQKKAVLDEGNEAVIQMLHGAKNLLKEEKFVHSYPYDWRTKKPVI 394
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFIDT +K A L+ V VP S + + + +R +WCISRQR WGVPIPV
Sbjct: 395 IRASKQWFIDTANLKSAAQEALKKVKCVPASGMNRMLEMLDRRTFWCISRQRRWGVPIPV 454
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNT 1265
FY T ++N+ +I++ ++++HG D WW+LP+EQLL++
Sbjct: 455 FYHKTTGNPLINKKSIENIIKVVEQHGSDGWWTLPIEQLLSS 496
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 1028 HFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
H + + SI K LYC+ R S L + ++R+ API+PHLAEEV+ +L
Sbjct: 710 HTRELSSFYFSIVKDRLYCEEEKDPKRRSCQTALAAVLDTMVRSFAPILPHLAEEVFQYL 769
Query: 1088 PSRQGTFSSF 1097
P R+ + S F
Sbjct: 770 PYRKESDSVF 779
>gi|170059338|ref|XP_001865320.1| isoleucyl-tRNA synthetase [Culex quinquefasciatus]
gi|167878148|gb|EDS41531.1| isoleucyl-tRNA synthetase [Culex quinquefasciatus]
Length = 851
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 271/621 (43%), Positives = 364/621 (58%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-----NQVPAHLLEGATDLHALIWTTTPWSLPANQ 472
+ALAE+ELEY H S S+YLK+K+ + + L EG + A+IWTTTPW+LPANQ
Sbjct: 131 SALAEAELEYDEAHKSPSLYLKMKIASTGCSTIHERLGEGVS---AVIWTTTPWTLPANQ 187
Query: 473 FIAFNPALEYSVASVKGANVI-VAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
I FNP L YS+ ++ V L+ L Q + V D G LQ Y HPI
Sbjct: 188 GICFNPDLSYSLVQTDLRELLLVGTDLISYLSEQLQLPLIKVADIRGSELQSTQYRHPIT 247
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
E +L LPA V S KGTGLVH APAHG DDFL+ L K P+ +LI G Y+ A
Sbjct: 248 SE--ELPFLPASHVKSEKGTGLVHTAPAHGPDDFLVFLNRKTPIKSLIDEAGCYNQTAPE 305
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L G L +G +L + L +HSYP DWRTK+PV+L+AS QWFI+T+R+K
Sbjct: 306 FLRGKFALTEGSQLILEHLRDQTLSCGTIEHSYPIDWRTKQPVMLRASAQWFINTDRLKE 365
Query: 652 EALACLEEVNFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVN 705
ALA ++++ P E +KK LR Q+ +RPYWCISRQR WGVPIPV Y+ ++ IV+
Sbjct: 366 SALAAVDKIEVYPQTSAEVSKKVLRGQLQKRPYWCISRQRAWGVPIPVVYERKSMTPIVH 425
Query: 706 EANIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGIS 758
I+ C + G DFWWS ++EQL+ ++ ++TK NDILDIWFDSGIS
Sbjct: 426 AGIIEQACRSLASAGNVDFWWSSTIEQLVPEEVLSELGLSPQDLTKGNDILDIWFDSGIS 485
Query: 759 WSHVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
W VL +D+ A +Y+EG+DQ GWF SSLLTSVA ++T+P+R VF+HGF VDE G KMSK
Sbjct: 486 WLSVLGRDRTADLYLEGLDQFTGWFQSSLLTSVAARNTSPYRAVFVHGFAVDEHGMKMSK 545
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GN+I S DI + YG D LRWWVAAHA +
Sbjct: 546 SLGNII-----------------------SPKDIVK------QYGCDALRWWVAAHAIQH 576
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR--YVDVYMLKRLCEFQN 935
++P+ +L SS + VQK+R +YLLGV+ + T ++ +VD Y L++L F +
Sbjct: 577 TSIPVSHKLLGSSAESVQKLRGIFKYLLGVVSSEDTKTLDPAKLFHVDRYFLQQLQHFND 636
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT-LHNIF 994
T+ + + +QY +AS +L F V+ LS FY L+KDRLYC +A+ L L
Sbjct: 637 TVFSQFDSYQYNKASSNILTFSVSTLSGFYLHLIKDRLYC---GPDAQFHNLRAILTQTL 693
Query: 995 HVLLRTVAPIMPHLAEEVYSH 1015
L + + PI P L EE +S+
Sbjct: 694 ETLCKALWPIAPFLVEECWSY 714
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 180/367 (49%), Positives = 228/367 (62%), Gaps = 16/367 (4%)
Query: 43 ILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALE 99
ILKD+ LR +++G+RVHY PGWDCHGLPIELKA+ + + + L PL IR+ A+ FAL+
Sbjct: 8 ILKDLILRHKIVEGRRVHYTPGWDCHGLPIELKALDAYKGRKESLDPLKIRQMARKFALD 67
Query: 100 TINTQKAEFESWGVLADWEHNC--YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSP 157
TI Q+ EFE WGV ADW + Y T D Y+ QL F L+++ IYRDLKPVYWSP
Sbjct: 68 TIEKQRGEFEQWGVTADWARSGAWYRTMDVGYIGAQLRLFRELFERGLIYRDLKPVYWSP 127
Query: 158 SSRTALAESELEYKPDHVSKSIYLKIKL-----NQVPAHLLEGATDLHALIWTTTPWSLP 212
SSR+ALAE+ELEY H S S+YLK+K+ + + L EG + A+IWTTTPW+LP
Sbjct: 128 SSRSALAEAELEYDEAHKSPSLYLKMKIASTGCSTIHERLGEGVS---AVIWTTTPWTLP 184
Query: 213 ANQFIAFNPALEYSVASVKGANVI-VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIH 271
ANQ I FNP L YS+ ++ V L+ L Q + V D G LQ Y H
Sbjct: 185 ANQGICFNPDLSYSLVQTDLRELLLVGTDLISYLSEQLQLPLIKVADIRGSELQSTQYRH 244
Query: 272 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 331
PI E +L LPA V S KGTGLVH APAHG DDFL+ L K P+ +LI G Y+
Sbjct: 245 PITSE--ELPFLPASHVKSEKGTGLVHTAPAHGPDDFLVFLNRKTPIKSLIDEAGCYNQT 302
Query: 332 AGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
A L G L +G +L + L +HSYP DWRTK+PV+L+AS QWFI+T+R
Sbjct: 303 APEFLRGKFALTEGSQLILEHLRDQTLSCGTIEHSYPIDWRTKQPVMLRASAQWFINTDR 362
Query: 392 IKPEALV 398
+K AL
Sbjct: 363 LKESALA 369
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+LI G Y+ A L G L EG +L + L +HSYP DWRTK+PV+L
Sbjct: 291 SLIDEAGCYNQTAPEFLRGKFALTEGSQLILEHLRDQTLSCGTIEHSYPIDWRTKQPVML 350
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+AS QWFI+T+R+K ALA ++ + P E +KK LR Q+ +RPYWCISRQR WGVP
Sbjct: 351 RASAQWFINTDRLKESALAAVDKIEVYPQTSAEVSKKVLRGQLQKRPYWCISRQRAWGVP 410
Query: 1223 IPVFYDGDTI--IVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
IPV Y+ ++ IV+ I+ C + G DFWWS +EQL+
Sbjct: 411 IPVVYERKSMTPIVHAGIIEQACRSLASAGNVDFWWSSTIEQLV 454
>gi|449496224|ref|XP_004175169.1| PREDICTED: LOW QUALITY PROTEIN: isoleucine--tRNA ligase,
mitochondrial [Taeniopygia guttata]
Length = 994
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/631 (39%), Positives = 370/631 (58%), Gaps = 44/631 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+S+S+Y+K L + P L ++G++ L+WTT PW+LPANQ +
Sbjct: 229 TALAEAELEYNEQHVSRSVYMKFPLLKSPPKLTAVIDGSSPASVLVWTTQPWTLPANQAV 288
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P YS+ + G + I+A VE+ T +VV G L D + HP
Sbjct: 289 CYMPDSAYSIVKCATTGQHFILAADRVESTAAVLDTQFEVVSTCKGADLADGSCAHPTIP 348
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ LLPA V+ +KGTGLVH APAHG +D+ +A ++P L+ G ++ AG
Sbjct: 349 GKVS-PLLPANHVTMTKGTGLVHTAPAHGMEDYSVASHHQLPTDCLVDECGYFTEAAGSE 407
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ N+L +G + V+ +++ +L E Y HSYPYDWRTKKP+I++AS+QWF++T +K
Sbjct: 408 LKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKPIIIRASKQWFVNTADVK 467
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
A L++V +P SA + + + +R +WCISRQR WGVPIP FY T ++N
Sbjct: 468 AAAQDVLKKVKVIPTSAVNRMLEMLDRRTFWCISRQRCWGVPIPAFYQKSTGECLINSET 527
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN-------SNVTKSNDILDIWFDSGISWSH 761
I ++++ G D WW+L +EQLL+ V S+ K D+LDIWFDSG SW+H
Sbjct: 528 ITDVIKIVEQQGTDAWWALPIEQLLSKQAVAKAGGHDVSDYVKGQDVLDIWFDSGTSWAH 587
Query: 762 VLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+ D+ A Y+EG DQ+ GWF SSLLTSVA + AP++ + +HGF + EKG KMSKSV
Sbjct: 588 VLEGADQRADTYLEGKDQLGGWFQSSLLTSVAARKKAPYKTLVVHGFTLGEKGEKMSKSV 647
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ + G + K P YG DVLRWWV A ++
Sbjct: 648 GNVVDPDVVINGG--------------------EDHAKDPPYGADVLRWWV-AESNVFTE 686
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V IG +LN+++DD+ K+R++LR++LG + + T SI VD YML L E+ +
Sbjct: 687 VMIGPVVLNAARDDINKLRNTLRFMLGNVDGFNPETDSIPPAEMHIVDQYMLHLLHEYGS 746
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +++Y++ R+L F LS FYF+++KDRLYC+ R S L
Sbjct: 747 KVTEAYKQYEYSKVVRLLQAFCSRSLSNFYFSVIKDRLYCEEAKDPKRRSCQTVLAEALD 806
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+++R+ API+PHLAEEV+ ++P ++ + F
Sbjct: 807 IVVRSFAPILPHLAEEVFQYIPYKKDSEGVF 837
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 269/405 (66%), Gaps = 12/405 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQR+ K EF LHDGPPYANG PH+GHA+NKILKDIT R ++++G +VH
Sbjct: 69 KCGFSELYSWQRQR-KTKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHVMRGYKVH 127
Query: 61 YVPGWDCHGLPIELKAITSKDKL--LSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
YVPGWDCHGLPIELKA++ LSP++IR++A+ FA I QK+ F WGV+ADW
Sbjct: 128 YVPGWDCHGLPIELKALSEVKGAENLSPMEIRQRARAFAERAIEKQKSAFIRWGVMADWA 187
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
NCY TFD +Y NQL F+ +Y + IYRD KPV+WSPS++TALAE+ELEY HVS+S
Sbjct: 188 -NCYLTFDPKYEANQLRVFHKMYDKGLIYRDYKPVFWSPSTKTALAEAELEYNEQHVSRS 246
Query: 179 IYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKGA 233
+Y+K L + P L ++G++ L+WTT PW+LPANQ + + P YS+ + G
Sbjct: 247 VYMKFPLLKSPPKLTAVIDGSSPASVLVWTTQPWTLPANQAVCYMPDSAYSIVKCATTGQ 306
Query: 234 NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
+ I+A VES T EVV G L D + HP + LLPA V+ +KG
Sbjct: 307 HFILAADRVESTAAVLDTQFEVVSTCKGADLADGSCAHPTIPGKVS-PLLPANHVTMTKG 365
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TGLVH APAHG +D+ +A ++P L+ G ++ AG L+ N+L +G + V+ ++
Sbjct: 366 TGLVHTAPAHGMEDYSVASHHQLPTDCLVDECGYFTEAAGSELKNKNVLEEGNEAVIKML 425
Query: 354 EP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ +L E Y HSYPYDWRTKKP+I++AS+QWF++T +K A
Sbjct: 426 QAAGSLLKEEKYVHSYPYDWRTKKPIIIRASKQWFVNTADVKAAA 470
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 103/165 (62%), Gaps = 4/165 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AG L+ N+L EG + V+ +++ +L E Y HSYPYDWRTKKP+I
Sbjct: 393 LVDECGYFTEAAGSELKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKPII 452
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++T +K A L+ V +P SA + + + +R +WCISRQR WGVPIP
Sbjct: 453 IRASKQWFVNTADVKAAAQDVLKKVKVIPTSAVNRMLEMLDRRTFWCISRQRCWGVPIPA 512
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
FY T ++N I ++++ G D WW+LP+EQLL+ V
Sbjct: 513 FYQKSTGECLINSETITDVIKIVEQQGTDAWWALPIEQLLSKQAV 557
Score = 47.8 bits (112), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1023 FSSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEE 1082
+FC + + S+ K LYC+ R S L +++R+ API+PHLAEE
Sbjct: 764 LQAFCS-RSLSNFYFSVIKDRLYCEEAKDPKRRSCQTVLAEALDIVVRSFAPILPHLAEE 822
Query: 1083 VYSHLPSRQGTFSSF 1097
V+ ++P ++ + F
Sbjct: 823 VFQYIPYKKDSEGVF 837
>gi|449270246|gb|EMC80942.1| Isoleucyl-tRNA synthetase, mitochondrial, partial [Columba livia]
Length = 926
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/671 (38%), Positives = 386/671 (57%), Gaps = 55/671 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+S+++Y+K L + P A +++G++ L+WTT PW++PANQ +
Sbjct: 162 TALAEAELEYNEKHVSRAVYVKFPLLKSPPKLASVIDGSSPASVLVWTTQPWTVPANQAV 221
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P YS+ + G I+A VE+ T +V+ G L D + HP
Sbjct: 222 CYMPDSAYSIVKCTTTGEQFILAADRVESTAAILDTQFEVMSTCKGVDLADGSCAHP-TI 280
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R LLPA V+ +KGTGLVH APAHG +D+ +A ++ L+ G ++ AGP
Sbjct: 281 PGRVSPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASHHQLSTDCLVDEGGFFTEAAGPQ 340
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ N+L +G + V+ +++ +L E Y HSYPYDWRTKKP+I++AS+QWF++T +K
Sbjct: 341 LKNKNVLEEGNEAVIQMLQAAGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTASVK 400
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
A L++V +P SA + + + +R +WCISRQR WGVPIPVFY +T ++N
Sbjct: 401 AAAQEVLKKVKVIPTSAANRMLEMLDRRTFWCISRQRCWGVPIPVFYQKNTGESLINSET 460
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-------NVTKSNDILDIWFDSGISWSH 761
+ ++++ G D WW+L +EQLL+ V + K D+LDIWFDSG SW+H
Sbjct: 461 VTDVIKIVEQQGTDAWWTLPIEQLLSKEAVAKAGGRDVLDYVKGQDVLDIWFDSGTSWAH 520
Query: 762 VLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VL+ ++ A Y+EG DQ+ GWF SSLLTSVA + AP++ + +HGF + EKG KMSKS+
Sbjct: 521 VLEGTEQRADTYLEGKDQLGGWFQSSLLTSVATRKKAPYKTLVVHGFTLGEKGEKMSKSI 580
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ + G + D T P YG DVLRWWV A ++
Sbjct: 581 GNVVDPDVVINGGE----------------DHTTD----PPYGADVLRWWV-AESNVFTE 619
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQN 935
V IG +LN+++DD+ K+R++LR++LG L S T SI VD YML L ++ +
Sbjct: 620 VLIGPVVLNAARDDINKLRNTLRFMLGNLAGFSPETDSIPASEMYIVDQYMLHLLQDYGS 679
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y E+ Y++ R+L F LS FYFT++KDRLYC+ R S L
Sbjct: 680 KVTEAYKEYDYSKVVRLLQAFCSRNLSNFYFTIIKDRLYCEEEKDPKRRSCQTVLAQALD 739
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSR---QGTF--------SSFCHFKVYLQYSGSIAKRIL 1044
+++R+ API+PHLAEEV+ +LP + +G F S++ + G+ A R
Sbjct: 740 IVVRSFAPILPHLAEEVFQYLPYKKDSEGVFRTGWINASSAWKKPGIEEAIEGACAMRDS 799
Query: 1045 YCDSINGEARL 1055
+ SI+G+ L
Sbjct: 800 FLGSISGQNAL 810
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/405 (48%), Positives = 269/405 (66%), Gaps = 12/405 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQR+ K EF LHDGPPYANG PH+GHA+NKILKDIT R +++G +VH
Sbjct: 2 KCGFSELYSWQRQR-KTKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFYVMRGYKVH 60
Query: 61 YVPGWDCHGLPIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
YVPGWDCHGLPIELKA++ + LSP++IR+KA+ F+ I QK+ F WGV+ADW+
Sbjct: 61 YVPGWDCHGLPIELKALSEVRGAENLSPMEIRQKAREFSERAIEKQKSAFIRWGVMADWD 120
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
NCY T D +Y NQL FY +Y + IY+D KPV+WSPS++TALAE+ELEY HVS++
Sbjct: 121 -NCYRTSDPKYEANQLRVFYKMYDKGLIYQDYKPVFWSPSTKTALAEAELEYNEKHVSRA 179
Query: 179 IYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKGA 233
+Y+K L + P A +++G++ L+WTT PW++PANQ + + P YS+ + G
Sbjct: 180 VYVKFPLLKSPPKLASVIDGSSPASVLVWTTQPWTVPANQAVCYMPDSAYSIVKCTTTGE 239
Query: 234 NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
I+A VES T EV+ G L D + HP R LLPA V+ +KG
Sbjct: 240 QFILAADRVESTAAILDTQFEVMSTCKGVDLADGSCAHP-TIPGRVSPLLPANHVTMAKG 298
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TGLVH APAHG +D+ +A ++ L+ G ++ AGP L+ N+L +G + V+ ++
Sbjct: 299 TGLVHTAPAHGMEDYSVASHHQLSTDCLVDEGGFFTEAAGPQLKNKNVLEEGNEAVIQML 358
Query: 354 EP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ +L E Y HSYPYDWRTKKP+I++AS+QWF++T +K A
Sbjct: 359 QAAGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTASVKAAA 403
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 110/173 (63%), Gaps = 7/173 (4%)
Query: 1103 YHHLN---LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYD 1157
+H L+ L+ G ++ AGP L+ N+L EG + V+ +++ +L E Y HSYPYD
Sbjct: 318 HHQLSTDCLVDEGGFFTEAAGPQLKNKNVLEEGNEAVIQMLQAAGSLLKEEKYVHSYPYD 377
Query: 1158 WRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQR 1217
WRTKKP+I++AS+QWF++T +K A L+ V +P SA + + + +R +WCISRQR
Sbjct: 378 WRTKKPMIIRASKQWFVNTASVKAAAQEVLKKVKVIPTSAANRMLEMLDRRTFWCISRQR 437
Query: 1218 VWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
WGVPIPVFY +T ++N + ++++ G D WW+LP+EQLL+ V
Sbjct: 438 CWGVPIPVFYQKNTGESLINSETVTDVIKIVEQQGTDAWWTLPIEQLLSKEAV 490
>gi|410925971|ref|XP_003976452.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like [Takifugu
rubripes]
Length = 1001
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/635 (40%), Positives = 376/635 (59%), Gaps = 53/635 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL-----LEGATDLHALIWTTTPWSLPANQ 472
TALAE+ELEY H+S++IY L P ++ L+G + L+WTT PW++PANQ
Sbjct: 240 TALAEAELEYNAHHVSRAIYATFPLTTAPPNIGSDVDLDGVS---VLVWTTQPWTIPANQ 296
Query: 473 FIAFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+ + P +YSV VK A+ +++A +L T+++ V G L+ H
Sbjct: 297 AVCYMPKAQYSV--VKRADSAQKLLLATERTASLSSLLGTELETVGTLTGSQLEGGICRH 354
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + + LLPA V+ KGTGLVH APAHG DD+ +A + V L+ G+++
Sbjct: 355 PLVPDSF-VPLLPANHVTMVKGTGLVHTAPAHGMDDYSVASNFNLSVECLVDEDGRFTEL 413
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG L+ L ++ +G D+V+ ++ ++ E HSYPYDWRTK+PVI++ S+QWFI+T
Sbjct: 414 AGAELQDLAVMSEGTDKVISMLRDCGALVKEEPCVHSYPYDWRTKQPVIIRPSRQWFINT 473
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
+K +A L++V+ +PESA+ +L + +R YWCISRQR WGVPIPVFY +T ++
Sbjct: 474 ASLKDKAKEALQKVHILPESARGSLLAMLDRRTYWCISRQRSWGVPIPVFYHKETGKALI 533
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLL-------NTSDVNSNVTKSNDILDIWFDSGI 757
N+ + H L G D WW L +E LL + + ++ + +D+LDIWFDSG
Sbjct: 534 NKYTMSHISHLFKAKGSDCWWELPLEALLPEEVLQKSKAGPVADYIRGDDVLDIWFDSGT 593
Query: 758 SWSHVLKDKP--AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
SW+ VL++ A Y+EG DQI GWF SSLLTSVA+++ AP+R++ +HGFVV EKG KM
Sbjct: 594 SWAAVLEETNFMADAYVEGKDQIGGWFQSSLLTSVAVRNKAPYRSLVVHGFVVGEKGEKM 653
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKSVGNV+ + G K + LP YG DVLRWW AA ++
Sbjct: 654 SKSVGNVVDPEVLINGGKV--------------------RRLLPPYGADVLRWW-AAESN 692
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
+ IG N+LNS++D + K+R+SLR+LLG LH + +++ Y+D YML L
Sbjct: 693 MFSEIHIGANVLNSARDSINKLRNSLRFLLGNLHGFNPQVQAVAPADMHYIDQYMLHLLH 752
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
++ + Y EF R RVL F+ ++LS+FYF+++KDRLYCD + R S L
Sbjct: 753 KYSIKVTDAYSEFDAGRVIRVLQAFITSDLSSFYFSIIKDRLYCDPDDSLGRRSCQTVLE 812
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ + R++AP++PHLAEEVY H P + S F
Sbjct: 813 KVLDGVTRSMAPVLPHLAEEVYLHSPGHEEAQSLF 847
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 193/408 (47%), Positives = 266/408 (65%), Gaps = 20/408 (4%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGF++LY+WQR+ K EF +HDGPPYANG PH+GHA+NKILKDI R +L+G+RVH
Sbjct: 81 KCGFADLYAWQRKR-KAKKEFCVHDGPPYANGDPHVGHALNKILKDIRNRFEMLRGRRVH 139
Query: 61 YVPGWDCHGLPIELKAITS-KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
YVPGWDCHGLPIELKA+ K L+PL IR+KA+ FA E I QKA F+ WGV+ADW+
Sbjct: 140 YVPGWDCHGLPIELKALGEIKTSSLTPLQIRQKARAFAEEAIARQKAAFQRWGVMADWD- 198
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
NCY+T Y QL F ++ + +IY+D KPV+WSPSSRTALAE+ELEY HVS++I
Sbjct: 199 NCYYTHHGVYEAAQLQVFQEMHSKGFIYQDHKPVFWSPSSRTALAEAELEYNAHHVSRAI 258
Query: 180 YLKIKLNQVPAHL-----LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
Y L P ++ L+G + L+WTT PW++PANQ + + P +YSV VK A+
Sbjct: 259 YATFPLTTAPPNIGSDVDLDGVS---VLVWTTQPWTIPANQAVCYMPKAQYSV--VKRAD 313
Query: 235 ----VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSS 290
+++A SL T++E V G L+ HP+ + + LLPA V+
Sbjct: 314 SAQKLLLATERTASLSSLLGTELETVGTLTGSQLEGGICRHPLVPDSF-VPLLPANHVTM 372
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL 350
KGTGLVH APAHG DD+ +A + V L+ G+++ AG L+ L ++ +G D+V+
Sbjct: 373 VKGTGLVHTAPAHGMDDYSVASNFNLSVECLVDEDGRFTELAGAELQDLAVMSEGTDKVI 432
Query: 351 HLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++ ++ E HSYPYDWRTK+PVI++ S+QWFI+T +K +A
Sbjct: 433 SMLRDCGALVKEEPCVHSYPYDWRTKQPVIIRPSRQWFINTASLKDKA 480
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G+++ AG L+ L ++ EG D+V+ ++ ++ E HSYPYDWRTK+PVI
Sbjct: 403 LVDEDGRFTELAGAELQDLAVMSEGTDKVISMLRDCGALVKEEPCVHSYPYDWRTKQPVI 462
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++ S+QWFI+T +K +A L+ V+ +PESA+ SL + +R YWCISRQR WGVPIPV
Sbjct: 463 IRPSRQWFINTASLKDKAKEALQKVHILPESARGSLLAMLDRRTYWCISRQRSWGVPIPV 522
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY +T ++N+ + H L G D WW LP+E LL
Sbjct: 523 FYHKETGKALINKYTMSHISHLFKAKGSDCWWELPLEALL 562
Score = 48.9 bits (115), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
SI K LYCD + R S L + + R++AP++PHLAEEVY H P + S F
Sbjct: 788 SIIKDRLYCDPDDSLGRRSCQTVLEKVLDGVTRSMAPVLPHLAEEVYLHSPGHEEAQSLF 847
>gi|390339216|ref|XP_784868.3| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 980
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 256/629 (40%), Positives = 377/629 (59%), Gaps = 43/629 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE---GATDLHAL-IWTTTPWSLPANQF 473
TALAE+ELEY P HIS +IY+K ++ P+ LL G TD A+ IWTTTPW++PANQ
Sbjct: 222 TALAEAELEYNPHHISPAIYVKFSIH-APSTLLADALGNTDNAAVVIWTTTPWTIPANQA 280
Query: 474 IAFNPALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+ + +Y + KG + +I+A V +LK + D+ ++ F G+ L+ + HP++
Sbjct: 281 VCYMADKDYCLLECKGTDDRLIIASDRVADLKEVWGRDLRIITTFSGRCLEGCSLYHPLD 340
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ LL A V GTGL+H APAHG +D+ +A+ + V + ++G Y+ D
Sbjct: 341 PCHH-VPLLAANHVKMGLGTGLIHTAPAHGAEDYGVAIQHNLKVTCQVDSEGFYTDDLRE 399
Query: 592 GLEGLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
L G N+L D V+ ++ ++L E+Y+HSYPYDWRTKKP+I++AS+QWFI+T +
Sbjct: 400 ELRGKNVLLDANQTVIDMLASSKNLLHQEDYEHSYPYDWRTKKPIIIRASKQWFINTASL 459
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG--DTIIVNEA 707
+ A CL+E++ P + T+R Q+A R +WCISRQRVWGVPIPV Y+ D I+ +
Sbjct: 460 RDTASECLDEIDMRPVYGRATMRTQLAARTFWCISRQRVWGVPIPVVYNKHTDEPILTKE 519
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSH 761
+ H L+ HG D WW LS +Q++ + +N +V DILDIWFDSG SWSH
Sbjct: 520 LVDHVTDLVMHHGSDCWWKLSKDQIVPQNILNQFDLCLDDVVLGEDILDIWFDSGTSWSH 579
Query: 762 VLKDK--PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
VLKD A VY+EG DQ WF +SLLTSVA + TAP+R+V +HGF +D +G KMSKS+
Sbjct: 580 VLKDAGHQADVYIEGEDQYGAWFQTSLLTSVAAQGTAPYRSVLVHGFALDAEGRKMSKSL 639
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV++ I G K KK PAYG DVLRW + A +
Sbjct: 640 GNVVNPDVIVGGGK--------------------NKKKEPAYGADVLRWRM-ADSDWMGR 678
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY-VDVYMLKRLCEFQNTMD 938
+ +G ++ + ++ K+R++ RY LG L + S G++ +D YML L E+ + +
Sbjct: 679 INVGPDLFAMTNQNIIKLRNTFRYFLGNLSDFKPSEGAVETTPLDRYMLHLLHEYSDHVT 738
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +++++ +R ++ V N++S+FY VKDRLYC+ + E R S LH++ V+
Sbjct: 739 RAYEDYEFSEVTRSAMDLVHNKISSFYLETVKDRLYCERGDSEKRRSCQTVLHHMLEVIS 798
Query: 999 RTVAPIMPHLAEEVYSHLPSRQ-GTFSSF 1026
R++API+PHLAEEV+ H +Q G S F
Sbjct: 799 RSLAPIVPHLAEEVHLHYSKQQEGAGSVF 827
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/409 (48%), Positives = 279/409 (68%), Gaps = 15/409 (3%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
CGFSELY+WQR++L K F LHDGPPYANG H+GHA+NKILKDI R L++G +VHY
Sbjct: 62 CGFSELYAWQRDSLREK-NFTLHDGPPYANGDVHVGHALNKILKDIINRYKLMRGYKVHY 120
Query: 62 VPGWDCHGLPIELKAIT-SKD--KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
VPGWDCHGLPIELKA+T SK+ + LS L IR +A+ FAL+ I +Q F+ WG++ADW+
Sbjct: 121 VPGWDCHGLPIELKALTESKEDFRKLSALQIRYQARKFALKAIESQMTAFKRWGIMADWD 180
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
NCY+TFDKEY +QL F+++Y++ +IYRD+KPV WSPSSRTALAE+ELEY P H+S +
Sbjct: 181 -NCYYTFDKEYEASQLQLFHDMYQKGFIYRDVKPVNWSPSSRTALAEAELEYNPHHISPA 239
Query: 179 IYLKIKLNQVPAHLLE---GATDLHA-LIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
IY+K ++ P+ LL G TD A +IWTTTPW++PANQ + + +Y + KG +
Sbjct: 240 IYVKFSIH-APSTLLADALGNTDNAAVVIWTTTPWTIPANQAVCYMADKDYCLLECKGTD 298
Query: 235 --VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
+I+A V LK + D+ ++ F G+ L+ + HP++ + LL A V
Sbjct: 299 DRLIIASDRVADLKEVWGRDLRIITTFSGRCLEGCSLYHPLDPCHH-VPLLAANHVKMGL 357
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGL+H APAHG +D+ +A+ + V + ++G Y+ D L G N+L D V+ +
Sbjct: 358 GTGLIHTAPAHGAEDYGVAIQHNLKVTCQVDSEGFYTDDLREELRGKNVLLDANQTVIDM 417
Query: 353 V--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ ++L E+Y+HSYPYDWRTKKP+I++AS+QWFI+T ++ A C
Sbjct: 418 LASSKNLLHQEDYEHSYPYDWRTKKPIIIRASKQWFINTASLRDTASEC 466
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 4/165 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G Y+ D L G N+L + V+ ++ ++L E+Y+HSYPYDWRTKKP+I+
Sbjct: 387 VDSEGFYTDDLREELRGKNVLLDANQTVIDMLASSKNLLHQEDYEHSYPYDWRTKKPIII 446
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+AS+QWFI+T ++ A CL+ ++ P + ++R Q+A R +WCISRQRVWGVPIPV
Sbjct: 447 RASKQWFINTASLRDTASECLDEIDMRPVYGRATMRTQLAARTFWCISRQRVWGVPIPVV 506
Query: 1227 YDG--DTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVN 1269
Y+ D I+ + + H L+ HG D WW L +Q++ + +N
Sbjct: 507 YNKHTDEPILTKELVDHVTDLVMHHGSDCWWKLSKDQIVPQNILN 551
>gi|347969377|ref|XP_312846.5| AGAP003156-PA [Anopheles gambiae str. PEST]
gi|333468497|gb|EAA08464.5| AGAP003156-PA [Anopheles gambiae str. PEST]
Length = 970
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 260/628 (41%), Positives = 358/628 (57%), Gaps = 64/628 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPA-------HLLEGATDLHALIWTTTPWSLPA 470
+ALAE+ELEY H S S+YLK+ L A H EG +++A IWTTTPW+LPA
Sbjct: 231 SALAEAELEYDEAHQSPSLYLKLALENGGADCAALRNHRPEGG-EIYAAIWTTTPWTLPA 289
Query: 471 NQFIAFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
NQ + +NPAL+Y + ++ G ++V K L++ L +T + V+ PG+ L + Y H
Sbjct: 290 NQAVCYNPALDYCLVRSAAAGELLLVGKDLIDYLATQLETALTVLQTIPGRELHTLKYHH 349
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+N+ Q L LPA V + KGTGLVH APAHG +DFL+ L KI + NLI +G+Y+
Sbjct: 350 PLNR-QTVLPFLPAAHVKAEKGTGLVHTAPAHGPEDFLVCLERKIAIENLIDERGRYTDR 408
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
A P L G L +G V + L HSYP DWRTK+PV+L+AS QWFIDT+
Sbjct: 409 APPFLHGKYALTEGNQLVTEALAGSTLKLTTLVHSYPIDWRTKQPVMLRASDQWFIDTDS 468
Query: 649 IKPEALACLEEVNFVPESA----KKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI-- 702
+K AL ++ V+ P ++ KK + Q+ +RPYWCISRQR WGVPIP YD T
Sbjct: 469 LKQRALEEIKSVDIYPRTSSDVSKKVIEGQLRKRPYWCISRQRAWGVPIPALYDTVTKQP 528
Query: 703 IVNEANIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDS 755
IV+ I + + G DFWW+ VE+L+ + + V K DILDIWFDS
Sbjct: 529 IVSGPLIAAIDARLQKEGSVDFWWTAPVEELVPAAVLQELGLTPDRVAKGRDILDIWFDS 588
Query: 756 GISWSHVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
G+SW VL K++ A +Y+EG+DQ GWF SSLLTSVA + AP+R +F+HGF VDE G K
Sbjct: 589 GVSWLTVLGKERVADLYLEGVDQFTGWFQSSLLTSVAARGKAPYRAIFVHGFAVDEHGMK 648
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS+GNVI I + YG D LRWWV AHA
Sbjct: 649 MSKSLGNVICPQQIAK-----------------------------QYGCDALRWWVCAHA 679
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS--------ISRYVDVYM 926
++ ++P+ +L SS + VQK+R L++LLGV+ G S+++D Y
Sbjct: 680 IQNTSIPVSHKLLGSSAESVQKLRGILKFLLGVVAPSGPEEGKPLPAIVLDASQHIDRYF 739
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L L F LY +Q+ RA+ V+LNF ++ LS Y ++KDRLYC S + L
Sbjct: 740 LHELEGFHRQAFELYDSYQHNRATAVILNFCLSTLSGLYLHVIKDRLYCGSPEQHSHLRA 799
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
+ L + + L + + PI+P L EE ++
Sbjct: 800 I--LDHTYRTLAQVLWPIVPFLVEESWT 825
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/414 (50%), Positives = 263/414 (63%), Gaps = 22/414 (5%)
Query: 4 FSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
SELY W R AL EFILHDGPPYANG H+GHAVNKILKD+ L+ ++ G RVHYVP
Sbjct: 63 LSELYQWNRSALPADSEFILHDGPPYANGDLHMGHAVNKILKDLILKHKIIGGTRVHYVP 122
Query: 64 GWDCHGLPIELKAITS----KDKLLSPL-----DIRKKAKNFALETINTQKAEFESWGVL 114
GWDCHGLPIELKA+ + + K P +IR A+ FALETI QKA FESWGV
Sbjct: 123 GWDCHGLPIELKALEAFNRKRAKRAGPTGQTAREIRHTARQFALETIAKQKAGFESWGVT 182
Query: 115 ADWE--HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKP 172
W CY + D Y+ QL FY LY++ IYRDLKPVYWSPSS++ALAE+ELEY
Sbjct: 183 GAWHDAEGCYRSLDPAYISAQLQLFYELYERKLIYRDLKPVYWSPSSQSALAEAELEYDE 242
Query: 173 DHVSKSIYLKIKLNQVPA-------HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEY 225
H S S+YLK+ L A H EG +++A IWTTTPW+LPANQ + +NPAL+Y
Sbjct: 243 AHQSPSLYLKLALENGGADCAALRNHRPEGG-EIYAAIWTTTPWTLPANQAVCYNPALDY 301
Query: 226 SV--ASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLL 283
+ ++ G ++V K L++ L +T + V+ PG+ L + Y HP+N+ Q L L
Sbjct: 302 CLVRSAAAGELLLVGKDLIDYLATQLETALTVLQTIPGRELHTLKYHHPLNR-QTVLPFL 360
Query: 284 PAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG 343
PA V + KGTGLVH APAHG +DFL+ L KI + NLI +G+Y+ A P L G L
Sbjct: 361 PAAHVKAEKGTGLVHTAPAHGPEDFLVCLERKIAIENLIDERGRYTDRAPPFLHGKYALT 420
Query: 344 DGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G V + L HSYP DWRTK+PV+L+AS QWFIDT+ +K AL
Sbjct: 421 EGNQLVTEALAGSTLKLTTLVHSYPIDWRTKQPVMLRASDQWFIDTDSLKQRAL 474
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 116/219 (52%), Gaps = 13/219 (5%)
Query: 1058 LHTLHNIFHVLLRTVAPIMP--HLAEEVYSHL----PSRQGTFSSFCHFKVYHHLNLITN 1111
LHTL + +TV P +P H+ E + L P+ C + NLI
Sbjct: 342 LHTLKYHHPLNRQTVLPFLPAAHVKAEKGTGLVHTAPAHGPEDFLVCLERKIAIENLIDE 401
Query: 1112 QGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQ 1171
+G+Y+ A P L G L EG V + L HSYP DWRTK+PV+L+AS Q
Sbjct: 402 RGRYTDRAPPFLHGKYALTEGNQLVTEALAGSTLKLTTLVHSYPIDWRTKQPVMLRASDQ 461
Query: 1172 WFIDTERIKPEALACLEGVNFVPES----AKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
WFIDT+ +K AL ++ V+ P + +KK + Q+ +RPYWCISRQR WGVPIP Y
Sbjct: 462 WFIDTDSLKQRALEEIKSVDIYPRTSSDVSKKVIEGQLRKRPYWCISRQRAWGVPIPALY 521
Query: 1228 DGDTI--IVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
D T IV+ I + + G DFWW+ PVE+L+
Sbjct: 522 DTVTKQPIVSGPLIAAIDARLQKEGSVDFWWTAPVEELV 560
>gi|109018264|ref|XP_001099877.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Macaca
mulatta]
Length = 986
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/623 (40%), Positives = 363/623 (58%), Gaps = 72/623 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 251 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A VE + T +T + + F G L++ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 IAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 IEHIVKLVEQHGSDVWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 608
Query: 761 HVLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
HVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 609 HVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPYKTVIVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P YG
Sbjct: 669 LGNVIHPDVVVNGG--------------------QDQSKEPPYG---------------- 692
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
++DD+ K+R++LR+LLG + + + T SI +D YML L +
Sbjct: 693 -----------ARDDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLA 741
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S L I
Sbjct: 742 NKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTALVEIL 801
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
V++R+ API+PHLAEEV+ H+P
Sbjct: 802 DVIVRSFAPILPHLAEEVFQHIP 824
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 312/495 (63%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 268 SIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A VE++ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 447 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIPGSA 506
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 507 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 563
Query: 460 IWTTTPWSLPANQFI 474
+W W+LP Q +
Sbjct: 564 VW----WTLPPEQLL 574
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFINIADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 535 FHHKTKDEYLINSQTIEHIVKLVEQHGSDVWWTLPPEQLL 574
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 774 SIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 824
>gi|443477054|ref|ZP_21066927.1| Isoleucyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
gi|443017893|gb|ELS32243.1| Isoleucyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
Length = 1003
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/635 (40%), Positives = 358/635 (56%), Gaps = 50/635 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY +H+S+SIY+ + L + T+LHA+IWTTTPW++PAN I+
Sbjct: 210 TALAEAELEYPENHVSRSIYVAFPVTNPSEKLKAIADLTNLHAVIWTTTPWTIPANLGIS 269
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YS+ + N IVA LVE L TF+ ++V F G L+ HPI R
Sbjct: 270 ANPHLSYSIVAAGDKNYIVATELVEKLAATFEEALEVKYTFKGDVLEGAIAKHPI--VDR 327
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
++ V++ GTGLVH AP HGQDDF++ + +++L+ ++G ++ DAG L G
Sbjct: 328 PSPIVLGDHVTAESGTGLVHTAPNHGQDDFIVGKKYNLGMISLVDDRGIFNEDAGADLAG 387
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
L++L +G +V+ ++ + ++ E Y H YPYDWRTKKPVI++A++QWF + + EA
Sbjct: 388 LSVLKEGNAKVVEILTANGTLIKEEAYNHKYPYDWRTKKPVIVRATEQWFASVDGFREEA 447
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++EVN++P + + + +R WCISRQR WGVPIPVFYD +T ++ E + H
Sbjct: 448 LKSIKEVNWIPAIGENRITSMVQERSDWCISRQRTWGVPIPVFYDEETNEPLLTEDTVDH 507
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSHVLKDK--- 766
LI EHG D WW VE+LL S N+ K D +D+WFDSG SW+ VL +
Sbjct: 508 IQELIREHGSDVWWEREVEELLPESYKNNGRKYRKGTDTMDVWFDSGSSWAGVLGGESHN 567
Query: 767 ----------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG KMS
Sbjct: 568 SRTVPYAMNYPADMYLEGSDQHRGWFQSSLLTSVATNGYAPYKTVLTHGFVLDEKGQKMS 627
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN++ + G K KK P YG DV+R W AA
Sbjct: 628 KSLGNIVDPMVVINGGKD--------------------QKKEPPYGADVIRLW-AASVDY 666
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV-----YMLKRLC 931
+ VPIGK IL D +KIR++ R+LL L + + + Y D+ Y+L RL
Sbjct: 667 NGDVPIGKTILAQMSDVSRKIRNTARFLLSNLFDFQPAEHLVP-YADLTESDRYILHRLA 725
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
E + Y +FQ++R +V+ NF +LS FY + KDRLY + N R S L
Sbjct: 726 EVTKDITEAYKKFQFSRFFQVIQNFCTVDLSNFYLDIAKDRLYISAPNAARRRSCQTVLM 785
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ + +AP++ H AE+++ HLP T S F
Sbjct: 786 YCLETIAKAIAPVLAHTAEDIWQHLPYPAPTKSVF 820
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/385 (48%), Positives = 252/385 (65%), Gaps = 11/385 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA---I 77
F LHDGPPYANGT H+GHA+NK+LKDI R LL+G +V YV GWDCHGLPIELK I
Sbjct: 67 FTLHDGPPYANGTLHMGHALNKVLKDIINRYKLLRGYKVRYVLGWDCHGLPIELKVLQNI 126
Query: 78 TSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++++ L+PL +RKKAK FAL+TIN Q F+ WGV D+E N Y+T EY Q+
Sbjct: 127 KAEERANLTPLQLRKKAKEFALQTINEQATGFKRWGVWGDYE-NAYYTLKPEYEAAQIGV 185
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL--LE 194
F + + YIYR LKPVYWSPSS TALAE+ELEY +HVS+SIY+ + L +
Sbjct: 186 FGRMTLKGYIYRGLKPVYWSPSSHTALAEAELEYPENHVSRSIYVAFPVTNPSEKLKAIA 245
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIE 254
T+LHA+IWTTTPW++PAN I+ NP L YS+ + N IVA LVE L TF+ +E
Sbjct: 246 DLTNLHAVIWTTTPWTIPANLGISANPHLSYSIVAAGDKNYIVATELVEKLAATFEEALE 305
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
V F G L+ HPI R ++ V++ GTGLVH AP HGQDDF++
Sbjct: 306 VKYTFKGDVLEGAIAKHPI--VDRPSPIVLGDHVTAESGTGLVHTAPNHGQDDFIVGKKY 363
Query: 315 KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWR 372
+ +++L+ ++G ++ DAG L GL++L +G +V+ ++ + ++ E Y H YPYDWR
Sbjct: 364 NLGMISLVDDRGIFNEDAGADLAGLSVLKEGNAKVVEILTANGTLIKEEAYNHKYPYDWR 423
Query: 373 TKKPVILKASQQWFIDTERIKPEAL 397
TKKPVI++A++QWF + + EAL
Sbjct: 424 TKKPVIVRATEQWFASVDGFREEAL 448
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
++L+ ++G ++ DAG L GL++L EG +V+ ++ + ++ E Y H YPYDWRTKKP
Sbjct: 368 ISLVDDRGIFNEDAGADLAGLSVLKEGNAKVVEILTANGTLIKEEAYNHKYPYDWRTKKP 427
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI++A++QWF + + EAL ++ VN++P + + + +R WCISRQR WGVPI
Sbjct: 428 VIVRATEQWFASVDGFREEALKSIKEVNWIPAIGENRITSMVQERSDWCISRQRTWGVPI 487
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
PVFYD +T ++ E + H LI EHG D WW VE+LL S N+
Sbjct: 488 PVFYDEETNEPLLTEDTVDHIQELIREHGSDVWWEREVEELLPESYKNN 536
>gi|339248811|ref|XP_003373393.1| putative isoleucine--tRNA ligase [Trichinella spiralis]
gi|316970480|gb|EFV54413.1| putative isoleucine--tRNA ligase [Trichinella spiralis]
Length = 1027
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/617 (40%), Positives = 358/617 (58%), Gaps = 31/617 (5%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL--EGATDLHALIWTTTPWSLPANQFIA 475
TALAESELEY +H ++++Y K + P +L + + AL+WTT PW+L N I
Sbjct: 207 TALAESELEYVTNHCTEAVYFKYSVVNFPKKILALQPTDRIWALVWTTMPWTLAFNNAIC 266
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
F L Y +A +K I A ++ L+ + +I+V F G +L + Y P+ +
Sbjct: 267 FGKKLVYILAKIKSEYYIFAMDAIDRLRNLLKLEIEVKSTFQGSFLSGLYYACPMQPDHA 326
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L A V+S+KGTGLVH + AHG +DF +A+ V + G+Y + GP L G
Sbjct: 327 -LPFYSAEHVTSAKGTGLVHTSFAHGFEDFAVAVEHGEEVKCFVDEDGRYRRELGPDLGG 385
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
L + +G+ VL + +L EN SYPYDWRTK+PVI+++S+QWFIDTE++K AL
Sbjct: 386 LQVQTEGQAAVLEKFKKYILAKENVTQSYPYDWRTKQPVIVRSSKQWFIDTEQLKKAALD 445
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN--IKHFC 713
L +VNF P + ++ ++ +A+RP WCISRQRVWGVP+P+FYD +T E+N +++
Sbjct: 446 QLNDVNFYPANFAQSFKEVLARRPAWCISRQRVWGVPVPIFYDPETNEPIESNSLLENTV 505
Query: 714 TLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK---PAHV 770
LI +HG D WW D + KS++ILDIWFDSG+SW+ L ++ A +
Sbjct: 506 RLIQQHGSDIWWHNQAGD-FAVDDTTRKLCKSDEILDIWFDSGVSWAAALDEQRKSSADL 564
Query: 771 YMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQ 830
+EGMDQ+ GWF S LLTSVA++ +P++NV LHGFV+DE+G KMSKSVGNVI+ +
Sbjct: 565 IVEGMDQLRGWFQSLLLTSVAVEQRSPYKNVLLHGFVLDEQGHKMSKSVGNVITPDAVIS 624
Query: 831 GAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSS 890
G ++ G+K+LPA GVD LR WVA A+ +P+G L +
Sbjct: 625 GQGEI------------------GSKQLPAVGVDGLRLWVAQCAADRTHIPVGPQSLLTV 666
Query: 891 QDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQY 946
+ + ++RS+L +LLGVL++ S S+ VD YML L EFQN+M + Y F
Sbjct: 667 KQTLGQLRSTLCFLLGVLNDFDCSNDSVEYDRLLVVDKYMLHVLAEFQNSMKSAYESFSA 726
Query: 947 ARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMP 1006
A + F +S FY T VKDRLYC+ R S LH + +AP++P
Sbjct: 727 LEAVTRAVQFSNGSVSKFYCTTVKDRLYCERAESLKRRSAQTVLHEVQTAFTSAIAPLLP 786
Query: 1007 HLAEEVYSHLPSRQGTF 1023
+LAEEV+ + + G+F
Sbjct: 787 YLAEEVHFYRNRKLGSF 803
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 180/400 (45%), Positives = 243/400 (60%), Gaps = 8/400 (2%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
C +LY WQ KP F+LHDGPPYANG H+GHAVNKILKDI R + G RVH+
Sbjct: 49 CNVDDLYKWQWN--QNKPTFVLHDGPPYANGDVHLGHAVNKILKDIFARYKAMSGFRVHF 106
Query: 62 VPGWDCHGLPIELKAITSKDK--LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
PGWDCHGLP+EL AI S D+ P +RK+AK FAL+ + +Q F+ W ++ADW+
Sbjct: 107 RPGWDCHGLPVELLAIKSMDENSRRDPTLVRKRAKEFALKAVQSQMDSFKKWAIMADWK- 165
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N Y T DKEY +L F L++ +YR PVYWSPSSRTALAESELEY +H ++++
Sbjct: 166 NPYLTLDKEYEGKELEIFKILHQHGLVYRAYSPVYWSPSSRTALAESELEYVTNHCTEAV 225
Query: 180 YLKIKLNQVPAHLL--EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 237
Y K + P +L + + AL+WTT PW+L N I F L Y +A +K I
Sbjct: 226 YFKYSVVNFPKKILALQPTDRIWALVWTTMPWTLAFNNAICFGKKLVYILAKIKSEYYIF 285
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A ++ L+ + +IEV F G +L + Y P+ + L A V+S+KGTGLV
Sbjct: 286 AMDAIDRLRNLLKLEIEVKSTFQGSFLSGLYYACPMQPDHA-LPFYSAEHVTSAKGTGLV 344
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H + AHG +DF +A+ V + G+Y + GP L GL + +G+ VL + +
Sbjct: 345 HTSFAHGFEDFAVAVEHGEEVKCFVDEDGRYRRELGPDLGGLQVQTEGQAAVLEKFKKYI 404
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L EN SYPYDWRTK+PVI+++S+QWFIDTE++K AL
Sbjct: 405 LAKENVTQSYPYDWRTKQPVIVRSSKQWFIDTEQLKKAAL 444
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 122/212 (57%), Gaps = 16/212 (7%)
Query: 1060 TLHNIFHVLLRTVAPIMPHLAEEVYS--HLPSRQGT---FSSFCH------FKVYHHLNL 1108
T F L P+ P A YS H+ S +GT +SF H V H +
Sbjct: 306 TFQGSFLSGLYYACPMQPDHALPFYSAEHVTSAKGTGLVHTSFAHGFEDFAVAVEHGEEV 365
Query: 1109 ---ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVI 1165
+ G+Y + GP L GL + EG+ VL + +L EN SYPYDWRTK+PVI
Sbjct: 366 KCFVDEDGRYRRELGPDLGGLQVQTEGQAAVLEKFKKYILAKENVTQSYPYDWRTKQPVI 425
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
+++S+QWFIDTE++K AL L VNF P + +S ++ +A+RP WCISRQRVWGVP+P+
Sbjct: 426 VRSSKQWFIDTEQLKKAALDQLNDVNFYPANFAQSFKEVLARRPAWCISRQRVWGVPVPI 485
Query: 1226 FYDGDTIIVNEAN--IKHFCTLIDEHGPDFWW 1255
FYD +T E+N +++ LI +HG D WW
Sbjct: 486 FYDPETNEPIESNSLLENTVRLIQQHGSDIWW 517
Score = 45.1 bits (105), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS-GSIAKRI-------LYCDSI 1049
L V M H+ E + + S +FS+ +Q+S GS++K LYC+
Sbjct: 699 LLVVDKYMLHVLAEFQNSMKSAYESFSALEAVTRAVQFSNGSVSKFYCTTVKDRLYCERA 758
Query: 1050 NGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTF 1094
R S LH + +AP++P+LAEEV+ + + G+F
Sbjct: 759 ESLKRRSAQTVLHEVQTAFTSAIAPLLPYLAEEVHFYRNRKLGSF 803
>gi|355745904|gb|EHH50529.1| hypothetical protein EGM_01376 [Macaca fascicularis]
Length = 941
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/628 (40%), Positives = 368/628 (58%), Gaps = 55/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + A L++G++ + L+WTT PW++PAN+ +
Sbjct: 179 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAV 238
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A VE + T +T + + F G L++ T HP+
Sbjct: 239 CYMPESKYAVVKCSKSGDLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIP 298
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 299 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 357
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 358 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK 417
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 418 IAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 478 IEHIVKLVEQHGSDVWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 536
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
HVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 537 HVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPYKTVIVHGFTLGEKGEKMSKS 596
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH-ASKD 877
+GNVI + G Q K P YG D +AH S
Sbjct: 597 LGNVIHPDVVVNGG--------------------QDQSKEPPYGAD-----QSAHPCSML 631
Query: 878 PTVPIGK----NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
P + + + L + +R++LR+LLG + + + T SI +D YML
Sbjct: 632 PEMILARLEPLFFLFLKDRFAKSLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHL 691
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
L + N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S
Sbjct: 692 LQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTA 751
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L I V++R+ API+PHLAEEV+ H+P
Sbjct: 752 LVEILDVIVRSFAPILPHLAEEVFQHIP 779
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 312/495 (63%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 18 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 76
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 77 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 136
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 137 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 195
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + A L++G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 196 SIYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 255
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A VE++ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 256 DLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 314
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 315 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 374
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 375 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIPGSA 434
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 435 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 491
Query: 460 IWTTTPWSLPANQFI 474
+W W+LP Q +
Sbjct: 492 VW----WTLPPEQLL 502
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 343 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 402
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 403 IRASKQWFINIADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 462
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 463 FHHKTKDEYLINSQTIEHIVKLVEQHGSDVWWTLPPEQLL 502
Score = 56.6 bits (135), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 39/174 (22%)
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
YG Q A +L ++ L +F +KDR +L N LL
Sbjct: 619 YGADQSAHPCSMLPEMILARLEPLFFLFLKDRF-------------AKSLRNTLRFLLGN 665
Query: 1001 VAPIMP------------------HLAEEVYSHLPS--RQGTFSSFCHF------KVYLQ 1034
VA P HL +++ + + +Q F +
Sbjct: 666 VADFNPETDSIPVNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSH 725
Query: 1035 YSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
+ SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 726 FYFSIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 779
>gi|355558756|gb|EHH15536.1| hypothetical protein EGK_01641 [Macaca mulatta]
Length = 941
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/628 (40%), Positives = 367/628 (58%), Gaps = 55/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY+K L + L L+G++ + L+WTT PW++PAN+ +
Sbjct: 179 TALAEAELEYNPEHVSRSIYVKFPLLKPSPKLSSFLDGSSPVSFLVWTTQPWTIPANEAV 238
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G ++A VE + T +T + + F G L++ T HP+
Sbjct: 239 CYMPESKYAVVKCSKSGDLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIP 298
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 299 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPE 357
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK
Sbjct: 358 LQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIK 417
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA + + + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 418 IAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQT 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
I+H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 478 IEHIVKLVEQHGSDVWWTLPPEQLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWS 536
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
HVL D+ A +Y+EG DQ+ GWF SSLLTSVA + AP++ V +HGF + EKG KMSKS
Sbjct: 537 HVLPGPDQRADLYLEGKDQLGGWFQSSLLTSVATRKKAPYKTVIVHGFTLGEKGEKMSKS 596
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH-ASKD 877
+GNVI + G Q K P YG D +AH S
Sbjct: 597 LGNVIHPDVVVNGG--------------------QDQSKEPPYGAD-----QSAHPCSML 631
Query: 878 PTVPIGK----NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
P + + + L + +R++LR+LLG + + + T SI +D YML
Sbjct: 632 PEMILARLEPLFFLFLKDRFAKSLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHL 691
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
L + N + LY ++ + + R+L F ELS FYF+++KDRLYC+ N R S
Sbjct: 692 LQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTA 751
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L I V++R+ API+PHLAEEV+ H+P
Sbjct: 752 LVEILDVIVRSFAPILPHLAEEVFQHIP 779
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 311/495 (62%), Gaps = 31/495 (6%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 18 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 76
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ + + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 77 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 136
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 137 -NNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 195
Query: 178 SIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY+K L + L L+G++ + L+WTT PW++PAN+ + + P +Y+V S G
Sbjct: 196 SIYVKFPLLKPSPKLSSFLDGSSPVSFLVWTTQPWTIPANEAVCYMPESKYAVVKCSKSG 255
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
++A VE++ T +T E + F G L++ T HP+ ++ LLPA V+ +K
Sbjct: 256 DLYVLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKAS-PLLPANHVTMAK 314
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 315 GTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKM 374
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNI 405
++ ++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+
Sbjct: 375 LQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIPGSA 434
Query: 406 L-GRVGITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHAL 459
L G V + RP ++ + P H +K YL +N Q H+++ +
Sbjct: 435 LNGMVEMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTIEHIVKLVEQHGSD 491
Query: 460 IWTTTPWSLPANQFI 474
+W W+LP Q +
Sbjct: 492 VW----WTLPPEQLL 502
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 343 LVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPVV 402
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWFI+ IK A L+ V F+P SA + + + +RPYWCISRQRVWGVPIPV
Sbjct: 403 IRASKQWFINIADIKIAAKELLKKVKFIPGSALNGMVEMMDRRPYWCISRQRVWGVPIPV 462
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N I+H L+++HG D WW+LP EQLL
Sbjct: 463 FHHKTKDEYLINSQTIEHIVKLVEQHGSDVWWTLPPEQLL 502
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 39/174 (22%)
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
YG Q A +L ++ L +F +KDR +L N LL
Sbjct: 619 YGADQSAHPCSMLPEMILARLEPLFFLFLKDRF-------------AKSLRNTLRFLLGN 665
Query: 1001 VAPIMP------------------HLAEEVYSHLPS--RQGTFSSFCHF------KVYLQ 1034
VA P HL +++ + + +Q F +
Sbjct: 666 VADFNPETDSIPVNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSH 725
Query: 1035 YSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
+ SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 726 FYFSIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 779
>gi|376004426|ref|ZP_09782129.1| Isoleucyl-tRNA synthetase [Arthrospira sp. PCC 8005]
gi|375327191|emb|CCE17882.1| Isoleucyl-tRNA synthetase [Arthrospira sp. PCC 8005]
Length = 964
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/636 (38%), Positives = 359/636 (56%), Gaps = 50/636 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY ++ + + E + DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN--------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
+A NP L Y+V +G + ++VA LVE L TF T++ V G L++ T
Sbjct: 256 VALNPELTYAVVETQGDSESPIEFKYLLVAAELVERLSATFNTNLTVKATVKGALLENCT 315
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
Y HP+ + + L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + G +
Sbjct: 316 YKHPLFDRESPI-LIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDENGDF 374
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
+ +AG GLN+L D ++ ++ ++ E YQH YPYDWRTKKP I +A++QWF
Sbjct: 375 TEEAGE-FAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKPTIFRATEQWF 433
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
E + +AL +++V ++P + + ++ R WCISRQR WGVPIPVFY+ +T
Sbjct: 434 ASVEGFREQALEAIKQVQWIPSQGENRITPMVSDRSDWCISRQRSWGVPIPVFYEEETGE 493
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISW 759
++NE I H +I +HG D WW LSVE+LL S VN+ K D +D+WFDSG SW
Sbjct: 494 PLLNEETINHVKDIIAQHGTDAWWKLSVEELLPESYVNNGKKYRKGTDTMDVWFDSGSSW 553
Query: 760 SHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+ V K + PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG K
Sbjct: 554 AAVAKQRPELAYPADIYLEGSDQHRGWFQSSLLTSVANHGIAPYKTVLTHGFVLDEKGYK 613
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS+GNV+ + G K ++ PAYG D+LR WV++
Sbjct: 614 MSKSLGNVVDPAVVINGGK--------------------NQQQDPAYGADILRLWVSS-V 652
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRL 930
VP+GKNIL D +KIR++ R+LLG LH+ + +I+ +D YML R+
Sbjct: 653 DYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKDAIAYEDLPELDRYMLHRM 712
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
E + + +Q+ R +V+ NF V +LS FY + KDRLY + NG R S L
Sbjct: 713 TEVFAEVTDAFETYQFFRFFQVVQNFCVVDLSNFYLDIAKDRLYISAENGFRRRSCQTVL 772
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ H AE+++ +LP S F
Sbjct: 773 AIALENLAKAIAPVLCHTAEDIWQNLPYSTPYLSVF 808
Score = 346 bits (888), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 178/400 (44%), Positives = 249/400 (62%), Gaps = 21/400 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FI+HDGPPYANG HIGHA+NKILKDI R LQG++V YVPGWDCHGLPIELK
Sbjct: 48 NPGDRFIIHDGPPYANGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELK 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S+ + L+PL +R+KA++FAL+T+ QK +F+ +GV DWE N Y T EY
Sbjct: 108 VLQQMKQSEREQLTPLTLREKARDFALKTVEEQKTQFQRYGVWGDWE-NPYLTLTPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY ++ +
Sbjct: 167 AQIAVFGVMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFRITSLAES 226
Query: 192 LLEGAT----DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------VIVAK 239
+ E + DL IWTTTPW++P N +A NP L Y+V +G + ++VA
Sbjct: 227 VRELLSPYLPDLGVAIWTTTPWTIPGNLAVALNPELTYAVVETQGDSESPIEFKYLLVAA 286
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
LVE L TF T++ V G L++ TY HP+ + + L+ +V++ GTGLVH
Sbjct: 287 ELVERLSATFNTNLTVKATVKGALLENCTYKHPLFDRESPI-LIGGDYVTTESGTGLVHT 345
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP HGQ+D+++ +P+L+ + G ++ +AG GLN+L D ++ ++ +
Sbjct: 346 APGHGQEDYIVGQRYGLPILSPVDENGDFTEEAGE-FAGLNVLKDANGAIIEALQEAGSL 404
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ E YQH YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 405 IKEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFREQAL 444
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AG GLN+L + ++ ++ ++ E YQH YPYDWRTKKP
Sbjct: 365 LSPVDENGDFTEEAGE-FAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKP 423
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + +AL ++ V ++P + + ++ R WCISRQR WGVPI
Sbjct: 424 TIFRATEQWFASVEGFREQALEAIKQVQWIPSQGENRITPMVSDRSDWCISRQRSWGVPI 483
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
PVFY+ +T ++NE I H +I +HG D WW L VE+LL S VN+
Sbjct: 484 PVFYEEETGEPLLNEETINHVKDIIAQHGTDAWWKLSVEELLPESYVNN 532
>gi|423065828|ref|ZP_17054618.1| isoleucyl-tRNA synthetase [Arthrospira platensis C1]
gi|406712586|gb|EKD07770.1| isoleucyl-tRNA synthetase [Arthrospira platensis C1]
Length = 964
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/636 (38%), Positives = 359/636 (56%), Gaps = 50/636 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY ++ + + E + DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN--------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
+A NP L Y+V +G + ++VA LVE L TF T++ V G L++ T
Sbjct: 256 VALNPELTYAVVETQGDSESPIEFKYLLVAAELVERLSATFHTNLTVKATVKGALLENCT 315
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
Y HP+ + + L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + G +
Sbjct: 316 YKHPLFDRESPI-LIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDENGDF 374
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
+ +AG GLN+L D ++ ++ ++ E YQH YPYDWRTKKP I +A++QWF
Sbjct: 375 TEEAGE-FAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKPTIFRATEQWF 433
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
E + +AL +++V ++P + + ++ R WCISRQR WGVPIPVFY+ +T
Sbjct: 434 ASVEGFREQALEAIKQVQWIPSQGENRITPMVSDRSDWCISRQRSWGVPIPVFYEEETGE 493
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISW 759
++NE I H +I +HG D WW LSVE+LL S VN+ K D +D+WFDSG SW
Sbjct: 494 PLLNEETINHVKDIIAQHGTDAWWKLSVEELLPESYVNNGKKYRKGTDTMDVWFDSGSSW 553
Query: 760 SHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+ V K + PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG K
Sbjct: 554 AAVAKQRPELAYPADIYLEGSDQHRGWFQSSLLTSVANHGIAPYKTVLTHGFVLDEKGYK 613
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS+GNV+ + G K ++ PAYG D+LR WV++
Sbjct: 614 MSKSLGNVVDPAVVINGGK--------------------NQQQDPAYGADILRLWVSS-V 652
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRL 930
VP+GKNIL D +KIR++ R+LLG LH+ + +I+ +D YML R+
Sbjct: 653 DYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKDAIAYEDLPELDRYMLHRM 712
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
E + + +Q+ R +V+ NF V +LS FY + KDRLY + NG R S L
Sbjct: 713 TEVFAEVTDAFETYQFFRFFQVVQNFCVVDLSNFYLDIAKDRLYISAENGFRRRSCQTVL 772
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ H AE+++ ++P S F
Sbjct: 773 AIALENLAKAIAPVLCHTAEDIWQNIPYSTPYLSVF 808
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/400 (44%), Positives = 249/400 (62%), Gaps = 21/400 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FI+HDGPPYANG HIGHA+NKILKDI R LQG++V YVPGWDCHGLPIELK
Sbjct: 48 NPGDRFIIHDGPPYANGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELK 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S+ + L+PL +R+KA++FAL+T+ QK +F+ +GV DWE N Y T EY
Sbjct: 108 VLQQMKQSEREQLTPLTLREKARDFALKTVEEQKTQFQRYGVWGDWE-NPYLTLTPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY ++ +
Sbjct: 167 AQIAVFGVMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFRITSLAES 226
Query: 192 LLEGAT----DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------VIVAK 239
+ E + DL IWTTTPW++P N +A NP L Y+V +G + ++VA
Sbjct: 227 VRELLSPYLPDLGVAIWTTTPWTIPGNLAVALNPELTYAVVETQGDSESPIEFKYLLVAA 286
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
LVE L TF T++ V G L++ TY HP+ + + L+ +V++ GTGLVH
Sbjct: 287 ELVERLSATFHTNLTVKATVKGALLENCTYKHPLFDRESPI-LIGGDYVTTESGTGLVHT 345
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP HGQ+D+++ +P+L+ + G ++ +AG GLN+L D ++ ++ +
Sbjct: 346 APGHGQEDYIVGQRYGLPILSPVDENGDFTEEAGE-FAGLNVLKDANGAIIEALQEAGSL 404
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ E YQH YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 405 IKEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFREQAL 444
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AG GLN+L + ++ ++ ++ E YQH YPYDWRTKKP
Sbjct: 365 LSPVDENGDFTEEAGE-FAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKP 423
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + +AL ++ V ++P + + ++ R WCISRQR WGVPI
Sbjct: 424 TIFRATEQWFASVEGFREQALEAIKQVQWIPSQGENRITPMVSDRSDWCISRQRSWGVPI 483
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
PVFY+ +T ++NE I H +I +HG D WW L VE+LL S VN+
Sbjct: 484 PVFYEEETGEPLLNEETINHVKDIIAQHGTDAWWKLSVEELLPESYVNN 532
>gi|409994105|ref|ZP_11277225.1| isoleucyl-tRNA ligase [Arthrospira platensis str. Paraca]
gi|291570477|dbj|BAI92749.1| isoleucyl-tRNA synthetase [Arthrospira platensis NIES-39]
gi|409935018|gb|EKN76562.1| isoleucyl-tRNA ligase [Arthrospira platensis str. Paraca]
Length = 964
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/637 (38%), Positives = 360/637 (56%), Gaps = 52/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY ++ + + E + DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN--------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
++ NP L YSV +G + ++VA LVE L TF+T++ V G+ L++ T
Sbjct: 256 VSLNPELTYSVVETQGDSESSIEFKYLLVAAELVERLSATFETNLTVKATVKGELLENCT 315
Query: 526 YIHPI-NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
Y HP+ ++E R L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + G
Sbjct: 316 YKHPLFDRESR--ILIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDENGD 373
Query: 585 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG GLN+L D ++ ++ ++ E YQH YPYDWRTKKP I +A++QW
Sbjct: 374 FTEEAGE-FAGLNVLKDANSAIIEALQEAGSLIKEEPYQHKYPYDWRTKKPTIFRATEQW 432
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F E + +AL +++V ++P + + ++ R WCISRQR WGVPIPVFY+ +T
Sbjct: 433 FASVEGFRSQALEAIKQVQWIPPQGENRITPMVSDRSDWCISRQRSWGVPIPVFYEEETG 492
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGIS 758
++NE I H +I E G D WW LSVE+LL S VN+ K D +D+WFDSG S
Sbjct: 493 EPLLNEETINHVKGIIAERGTDAWWELSVEELLPESYVNNGKKYRKGTDTMDVWFDSGSS 552
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V K + PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE G
Sbjct: 553 WAAVAKQRPELAYPADIYLEGSDQHRGWFQSSLLTSVANYGIAPYKTVLTHGFVLDENGR 612
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GNV+ + G K ++ PAYG D+LR WV++
Sbjct: 613 KMSKSIGNVVDPAVVINGGK--------------------NQQQEPAYGADILRLWVSS- 651
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKR 929
VP+GKNIL D +KIR++ R+LLG LH+ + +I+ +D YML R
Sbjct: 652 VDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKDAIAYQDLPELDRYMLHR 711
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E + + +Q+ R + + NF V +LS FY + KDRLY + NG R S
Sbjct: 712 MTEVFAEVKDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAENGFRRRSCQTV 771
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L L + +AP++ H AE+++ ++P S F
Sbjct: 772 LAIALENLAKAIAPVLCHTAEDIWQNMPYSTPYLSVF 808
Score = 348 bits (894), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/401 (44%), Positives = 253/401 (63%), Gaps = 23/401 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F++HDGPPYANG HIGHA+NKILKDI R LQG++V YVPGWDCHGLPIELK
Sbjct: 48 NPGDRFVIHDGPPYANGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELK 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S+ + L+P+ +R+KA++FAL+T+ QK +F+ +GV DW+ N Y T EY
Sbjct: 108 VLQQMKQSEREQLTPMTLREKARDFALKTVEEQKTQFQRYGVWGDWD-NPYLTLTPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY ++ +
Sbjct: 167 AQIAVFAQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFRITSLAES 226
Query: 192 LLEGAT----DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------VIVAK 239
+ E + DL IWTTTPW++P N ++ NP L YSV +G + ++VA
Sbjct: 227 VRELLSPYLPDLGVAIWTTTPWTIPGNLAVSLNPELTYSVVETQGDSESSIEFKYLLVAA 286
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLVH 298
LVE L TF+T++ V G+ L++ TY HP+ ++E R L+ +V++ GTGLVH
Sbjct: 287 ELVERLSATFETNLTVKATVKGELLENCTYKHPLFDRESR--ILIGGDYVTTESGTGLVH 344
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--D 356
AP HGQ+D+++ +P+L+ + G ++ +AG GLN+L D ++ ++
Sbjct: 345 TAPGHGQEDYIVGQRYGLPILSPVDENGDFTEEAGE-FAGLNVLKDANSAIIEALQEAGS 403
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ E YQH YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 404 LIKEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRSQAL 444
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AG GLN+L + ++ ++ ++ E YQH YPYDWRTKKP
Sbjct: 365 LSPVDENGDFTEEAGE-FAGLNVLKDANSAIIEALQEAGSLIKEEPYQHKYPYDWRTKKP 423
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + +AL ++ V ++P + + ++ R WCISRQR WGVPI
Sbjct: 424 TIFRATEQWFASVEGFRSQALEAIKQVQWIPPQGENRITPMVSDRSDWCISRQRSWGVPI 483
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
PVFY+ +T ++NE I H +I E G D WW L VE+LL S VN+
Sbjct: 484 PVFYEEETGEPLLNEETINHVKGIIAERGTDAWWELSVEELLPESYVNN 532
>gi|223993195|ref|XP_002286281.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
gi|220977596|gb|EED95922.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
Length = 1083
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/651 (39%), Positives = 371/651 (56%), Gaps = 67/651 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+SKSIY+ + + L +E L IWTTTPW++PAN +
Sbjct: 272 TALAEAELEYPEGHVSKSIYVALDVVSPSEELKEYMEEGEKLKVAIWTTTPWTIPANLAV 331
Query: 475 AFNPALEYSVASV------KGANVIVAKCLVENLKWTFQ----TDIDVVCDFPGQYLQDI 524
A NP LEY V + ++VA LV+ L+ FQ + VV FPG L
Sbjct: 332 AINPDLEYCVVDTHESVLDGKSKLLVATGLVKTLESKFQLPEGEHLKVVATFPGSTLVGT 391
Query: 525 TYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 583
TY HP+ +R ++ G ++++ GTGLVH AP HGQ+D+L L + +L+ + + G
Sbjct: 392 TYQHPLY--ERTSPVVAGGDYITTESGTGLVHTAPGHGQEDYLTGLKYGLELLSPVDDVG 449
Query: 584 KYSPDAGP------GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 635
K++ +AG GL++LG+G V+ +E ++ ENY H YPYDWRTKKP I
Sbjct: 450 KFTVEAGSSTVVGDAFVGLSVLGEGNLAVIEALEQAGALIRAENYGHKYPYDWRTKKPTI 509
Query: 636 LKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPV 695
+A+ QWF E + +AL ++ V ++P++ K +R + R WCISRQR WGVPIPV
Sbjct: 510 FRATAQWFASVEGFREDALKAVDTVKWIPDTGKNRIRSFVESRGDWCISRQRSWGVPIPV 569
Query: 696 FYDGDT----IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDIL 749
FYD +T I+++E + H ++ EHG D WW L LL D TK +D +
Sbjct: 570 FYDKETGGTEILLDEDTLNHIQSVFAEHGSDAWWKLDTVDLLPEKYKDQADKWTKGSDTM 629
Query: 750 DIWFDSGISWSHVLKDK---------PAHVYMEGMDQINGWFMSSLLTSVAL-KHTAPFR 799
D+WFDSG SW+ V + + PA +Y+EG DQ GWF SSLLTSVA K AP++
Sbjct: 630 DVWFDSGSSWAGVTQQRADEDMGLGYPADIYLEGSDQHRGWFQSSLLTSVAANKGQAPYK 689
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL- 858
+V HGFV+DEKG KMSKS+GNV++ + +G KKL
Sbjct: 690 SVLTHGFVLDEKGFKMSKSLGNVVNPLQVIEGGNN---------------------KKLE 728
Query: 859 PAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI 918
PAYG DVLR WVA+ V +G NI+ + + +K+R++ RYL+G L + + +T SI
Sbjct: 729 PAYGADVLRLWVAS-VDYAGDVRVGANIIKQTFESYRKLRNTARYLIGNLADFNPATDSI 787
Query: 919 SR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
+D +ML L N +D ++Q++RA++ LL F ++LS FY + KDRLY
Sbjct: 788 PYEDLPSMDKWMLGTLSSVLNEVDDAMSQYQFSRATQELLRFSTSDLSNFYLDVAKDRLY 847
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSS 1025
++N R S LH++ +++API+PH+AE+++ +LP ++ + SS
Sbjct: 848 ISAVNDARRRSCQTVLHSLLEGFAKSIAPILPHMAEDIWQNLPYKKESDSS 898
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 252/410 (61%), Gaps = 29/410 (7%)
Query: 14 ALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE 73
A N FILHDGPPYANG HIGHA+NK+LKD R +L+GK+VHYVPGWDCHGLPIE
Sbjct: 122 AANSAERFILHDGPPYANGDLHIGHALNKLLKDFINRHQILKGKQVHYVPGWDCHGLPIE 181
Query: 74 LKAI-TSKDK---LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
LK + T K K L+P+ +R+KA +FA ET+ Q A F+ +GV+ D+ N Y T EY
Sbjct: 182 LKVLQTMKSKEREALTPVTLREKAASFAKETVEKQSASFQRYGVIGDF-GNPYLTLLPEY 240
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F +YK +I+R KPV+WSPSS+TALAE+ELEY HVSKSIY+ + +
Sbjct: 241 EAAQIRVFGEMYKAGHIFRGRKPVHWSPSSKTALAEAELEYPEGHVSKSIYVALDVVSPS 300
Query: 190 AHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV------KGANVIVAKC 240
L +E L IWTTTPW++PAN +A NP LEY V + ++VA
Sbjct: 301 EELKEYMEEGEKLKVAIWTTTPWTIPANLAVAINPDLEYCVVDTHESVLDGKSKLLVATG 360
Query: 241 LVESLKWTFQ----TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTG 295
LV++L+ FQ ++VV FPG L TY HP+ +R ++ G ++++ GTG
Sbjct: 361 LVKTLESKFQLPEGEHLKVVATFPGSTLVGTTYQHPLY--ERTSPVVAGGDYITTESGTG 418
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP------GLEGLNILGDGKDQV 349
LVH AP HGQ+D+L L + +L+ + + GK++ +AG GL++LG+G V
Sbjct: 419 LVHTAPGHGQEDYLTGLKYGLELLSPVDDVGKFTVEAGSSTVVGDAFVGLSVLGEGNLAV 478
Query: 350 LHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +E ++ ENY H YPYDWRTKKP I +A+ QWF E + +AL
Sbjct: 479 IEALEQAGALIRAENYGHKYPYDWRTKKPTIFRATAQWFASVEGFREDAL 528
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 12/170 (7%)
Query: 1106 LNLITNQGKYSPDAGP------GLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYD 1157
L+ + + GK++ +AG GL++LGEG V+ +E ++ ENY H YPYD
Sbjct: 442 LSPVDDVGKFTVEAGSSTVVGDAFVGLSVLGEGNLAVIEALEQAGALIRAENYGHKYPYD 501
Query: 1158 WRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQR 1217
WRTKKP I +A+ QWF E + +AL ++ V ++P++ K +R + R WCISRQR
Sbjct: 502 WRTKKPTIFRATAQWFASVEGFREDALKAVDTVKWIPDTGKNRIRSFVESRGDWCISRQR 561
Query: 1218 VWGVPIPVFYDGDT----IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WGVPIPVFYD +T I+++E + H ++ EHG D WW L LL
Sbjct: 562 SWGVPIPVFYDKETGGTEILLDEDTLNHIQSVFAEHGSDAWWKLDTVDLL 611
Score = 48.1 bits (113), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQ----GTFSSFCH--------------FKV 1031
L N L+ +A P Y LPS GT SS + +
Sbjct: 766 LRNTARYLIGNLADFNPATDSIPYEDLPSMDKWMLGTLSSVLNEVDDAMSQYQFSRATQE 825
Query: 1032 YLQYSGS--------IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV 1083
L++S S +AK LY ++N R S LH++ +++API+PH+AE++
Sbjct: 826 LLRFSTSDLSNFYLDVAKDRLYISAVNDARRRSCQTVLHSLLEGFAKSIAPILPHMAEDI 885
Query: 1084 YSHLPSRQGTFSS 1096
+ +LP ++ + SS
Sbjct: 886 WQNLPYKKESDSS 898
>gi|411117277|ref|ZP_11389764.1| Isoleucyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
gi|410713380|gb|EKQ70881.1| Isoleucyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
Length = 964
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 253/626 (40%), Positives = 352/626 (56%), Gaps = 49/626 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y ++ VP L +L IWTTTPW++P N
Sbjct: 198 TALAEAELEYPEGHTSRSLYAAFEVTNVPMALQTPFDPFLGELGVAIWTTTPWTIPGNLG 257
Query: 474 IAFNPALEYSVASVKGAN-------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITY 526
++ NP L Y+V V G N ++VAK LVE+L T T + V G+ L+ ITY
Sbjct: 258 VSVNPDLVYAVVEV-GENAPGRFKYLLVAKDLVESLSDTLGTSLTVRATIMGRLLEHITY 316
Query: 527 IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
HP+ + ++ L+ +V++ GTGLVH AP HGQ+D+ + + +P+L + + G ++
Sbjct: 317 RHPLFDRESEV-LIGGDYVTTDSGTGLVHTAPGHGQEDYQVGMRYGLPILAPVDDDGNFT 375
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
+AGP GLN+LGDG V+ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 376 AEAGPLFAGLNVLGDGNGAVITALQEAGSLLKEEPYQHKYPYDWRTKKPTIFRATEQWFA 435
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--I 702
E + EAL + EV ++P + + +A R WCISRQR WGVPIPVFYD +T
Sbjct: 436 SVEGFRDEALKAIAEVRWIPAQGENRITPMVADRSDWCISRQRSWGVPIPVFYDEETGEP 495
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWS 760
++N+ I H +I E G D WW L V +LL ++ T K D +D+WFDSG SW+
Sbjct: 496 LLNQETIAHVQAIIAEKGSDAWWELPVAELLPEPYRSNGKTYRKGTDTMDVWFDSGSSWA 555
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE+G KM
Sbjct: 556 AVAKQRPELRYPVDMYLEGSDQHRGWFQSSLLTSVAVNGHAPYKTVLTHGFALDEQGRKM 615
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNV+ I G K K+ P YG DVLR WV++
Sbjct: 616 SKSLGNVVDPAIIINGGKN--------------------QKEEPPYGADVLRLWVSS-VD 654
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLC 931
V IGKNIL D KIR++ R+LLG LH+ + +T I+ +D YML R+
Sbjct: 655 YTSDVLIGKNILKQLGDVRGKIRNTARFLLGNLHDFNPATDVITYDQLPELDRYMLHRIT 714
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
E N + + FQ+ R + + NF V +LS FY + KDRLY + N R S +
Sbjct: 715 EVFNDVTDAFETFQFYRFFQTVQNFCVVDLSNFYLDIAKDRLYISTANSPRRRSCQTVMW 774
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L R +AP++ HLAE+++ LP
Sbjct: 775 VALENLARAIAPVLSHLAEDIWQFLP 800
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 180/394 (45%), Positives = 253/394 (64%), Gaps = 20/394 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F+LHDGPPYANG+ H+GHA+NK+LKDI + LL+G++V YVPGWDCHGLPIELK + +
Sbjct: 55 FVLHDGPPYANGSLHMGHAMNKVLKDIINKYQLLKGRKVRYVPGWDCHGLPIELKVLQAM 114
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+PL +R+KAK FAL+T++ Q+ F+ +GV DW+H Y T + EY Q+
Sbjct: 115 KPEQRRELTPLTLRQKAKEFALKTVDEQRESFKRYGVWGDWDH-PYLTLEPEYEAAQIGV 173
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG- 195
F + + YIYR KPV+WSPSS+TALAE+ELEY H S+S+Y ++ VP L
Sbjct: 174 FGQMVLKGYIYRGRKPVHWSPSSKTALAEAELEYPEGHTSRSLYAAFEVTNVPMALQTPF 233
Query: 196 ---ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-------VIVAKCLVESL 245
+L IWTTTPW++P N ++ NP L Y+V V G N ++VAK LVESL
Sbjct: 234 DPFLGELGVAIWTTTPWTIPGNLGVSVNPDLVYAVVEV-GENAPGRFKYLLVAKDLVESL 292
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
T T + V G+ L+ ITY HP+ + ++ L+ +V++ GTGLVH AP HGQ
Sbjct: 293 SDTLGTSLTVRATIMGRLLEHITYRHPLFDRESEV-LIGGDYVTTDSGTGLVHTAPGHGQ 351
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
+D+ + + +P+L + + G ++ +AGP GLN+LGDG V+ ++ +L E Y
Sbjct: 352 EDYQVGMRYGLPILAPVDDDGNFTAEAGPLFAGLNVLGDGNGAVITALQEAGSLLKEEPY 411
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QH YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 412 QHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 445
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AGP GLN+LG+G V+ ++ +L E YQH YPYDWRTKKP I
Sbjct: 368 VDDDGNFTAEAGPLFAGLNVLGDGNGAVITALQEAGSLLKEEPYQHKYPYDWRTKKPTIF 427
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P + + +A R WCISRQR WGVPIPVF
Sbjct: 428 RATEQWFASVEGFRDEALKAIAEVRWIPAQGENRITPMVADRSDWCISRQRSWGVPIPVF 487
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD +T ++N+ I H +I E G D WW LPV +LL
Sbjct: 488 YDEETGEPLLNQETIAHVQAIIAEKGSDAWWELPVAELL 526
>gi|391330803|ref|XP_003739842.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like [Metaseiulus
occidentalis]
Length = 927
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/608 (40%), Positives = 347/608 (57%), Gaps = 44/608 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY P H S ++YL+ L + G L AL+WTTTPW+L ANQ I F+
Sbjct: 204 TALAEAELEYNPQHESTAVYLRFPLISGEHLIPSGVESLSALVWTTTPWTLLANQAICFS 263
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L Y + N +I+ L+E L+ F ++ VV +F + YI+P+ R
Sbjct: 264 PGLRYIIVRKNHENDGMIICADLLEALQKEFNCELKVVSNFDTASFSGLKYINPLTG--R 321
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ-GKYSPDAGPGLE 594
LP V+S +G+GLVH AP HGQDD++ AL + + I N+ G+Y+ + L
Sbjct: 322 RSIFLPGSHVNSQRGSGLVHSAPNHGQDDYVNALKHNLALDPCIVNEEGRYN-ELADDLR 380
Query: 595 GLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
GL +L +G +V+ ++ ++ Y HSYPYDWR+KKP+++++S QWFID ++ +
Sbjct: 381 GLEVLTEGSAEVVKRLQAQNSLVHVSKYIHSYPYDWRSKKPILVRSSLQWFIDLSSLRHK 440
Query: 653 ALACL-EEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANIK 710
A+ L EV PESAKK +Q+A RP+WCISRQR WGVPIPV+Y DG+++ ++ +
Sbjct: 441 AVEVLTNEVQMHPESAKKMFLNQLAMRPHWCISRQRSWGVPIPVYYKDGESVHMDRKFVD 500
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKPAHV 770
C + HG DFW+ + +L + DI+DIW DSG+SWS VL K A +
Sbjct: 501 QVCEAVKNHGTDFWYRPDAKNILGI-----DGELGTDIMDIWLDSGLSWSTVLNGKQADL 555
Query: 771 YMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQ 830
Y+EG+DQI GWF SSLLTSVAL AP++ +FLHGFV+D G KMSKS+GN+I+ DIT
Sbjct: 556 YLEGVDQIRGWFQSSLLTSVALTGRAPYKKLFLHGFVLDGDGQKMSKSLGNIIAPSDITD 615
Query: 831 GAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSS 890
G K L G+ VLRWWVA+HA+ +V +GKNIL+
Sbjct: 616 GKKAL--------------------------GLSVLRWWVASHAATSESVLVGKNILDEC 649
Query: 891 QDDVQKIRSSLRYLLG---VLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYA 947
+ + K R+S +++LG E +D ML +CE + ++ Y + Y
Sbjct: 650 EVLISKFRNSFKFILGNTASFQKRQELGYEDLLALDKAMLHTVCELEGSIQKDYDDMDYT 709
Query: 948 RASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPH 1007
R + NFV+++LSA Y +K+RLYC + R S TL ++ L R API PH
Sbjct: 710 SVCRKISNFVISDLSAVYMHAIKNRLYCYGEHSVERRSACTTLKHVGFFLARYTAPIAPH 769
Query: 1008 LAEEVYSH 1015
LA E H
Sbjct: 770 LAAEFLVH 777
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/400 (46%), Positives = 257/400 (64%), Gaps = 10/400 (2%)
Query: 4 FSELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
F E Y WQRE + K EF+LHDGPPYANG H+GHAVNKILKDIT R L G RVHYV
Sbjct: 47 FDEHYRWQREKGDHSKGEFVLHDGPPYANGQLHLGHAVNKILKDITCRHRALSGYRVHYV 106
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
PGWDCHGLPIE KAI ++ + PL IR+KA+ FAL T++ Q F WG++A+W Y
Sbjct: 107 PGWDCHGLPIESKAI-AEGETTDPLIIREKARGFALRTLDEQLEAFRKWGIMANWPSGIY 165
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D +YV QL F +Y++ Y++RDLKP+YWSPS+RTALAE+ELEY P H S ++YL+
Sbjct: 166 RTLDPDYVAAQLRAFCTMYEKGYVFRDLKPIYWSPSNRTALAEAELEYNPQHESTAVYLR 225
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
L + G L AL+WTTTPW+L ANQ I F+P L Y + N +I+
Sbjct: 226 FPLISGEHLIPSGVESLSALVWTTTPWTLLANQAICFSPGLRYIIVRKNHENDGMIICAD 285
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L+E+L+ F +++VV +F + YI+P+ R LP V+S +G+GLVH A
Sbjct: 286 LLEALQKEFNCELKVVSNFDTASFSGLKYINPLTG--RRSIFLPGSHVNSQRGSGLVHSA 343
Query: 301 PAHGQDDFLLALAEKIPVLNLITN-QGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
P HGQDD++ AL + + I N +G+Y+ + L GL +L +G +V+ ++ +
Sbjct: 344 PNHGQDDYVNALKHNLALDPCIVNEEGRYN-ELADDLRGLEVLTEGSAEVVKRLQAQNSL 402
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ Y HSYPYDWR+KKP+++++S QWFID ++ +A+
Sbjct: 403 VHVSKYIHSYPYDWRSKKPILVRSSLQWFIDLSSLRHKAV 442
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
++ +G+Y+ + L GL +L EG +V+ ++ ++ Y HSYPYDWR+KKP++
Sbjct: 365 IVNEEGRYN-ELADDLRGLEVLTEGSAEVVKRLQAQNSLVHVSKYIHSYPYDWRSKKPIL 423
Query: 1166 LKASQQWFIDTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
+++S QWFID ++ +A+ L V PESAKK +Q+A RP+WCISRQR WGVPIP
Sbjct: 424 VRSSLQWFIDLSSLRHKAVEVLTNEVQMHPESAKKMFLNQLAMRPHWCISRQRSWGVPIP 483
Query: 1225 VFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
V+Y DG+++ ++ + C + HG DFW+ + +L
Sbjct: 484 VYYKDGESVHMDRKFVDQVCEAVKNHGTDFWYRPDAKNIL 523
>gi|84029572|sp|Q8DGI7.2|SYI_THEEB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
Length = 953
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/628 (40%), Positives = 354/628 (56%), Gaps = 43/628 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y ++ ++P L + L IWTTTPW++PAN
Sbjct: 197 TALAEAELEYPEGHTSRSLYAAFEVIELPQGLAKAWYNALGKLGVAIWTTTPWTIPANLA 256
Query: 474 IAFNPALEYSVASVKGA----NVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
++ NP L Y++ V+ + ++IVAK LVE L T + VV G L+ Y HP
Sbjct: 257 VSVNPDLTYALVEVQPSERYKHLIVAKDLVERLSDTLGRTLKVVATAKGADLEHSRYRHP 316
Query: 530 INKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
+ +R+ K+L G +V++ GTGLVH AP HG +D+ + +P+L+ + G ++ +
Sbjct: 317 LF--EREGKILIGGDYVTTESGTGLVHTAPGHGLEDYGVGQRYGLPILSPVDENGCFTAE 374
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AGP GLN+L +G V+ ++ +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 375 AGP-FAGLNVLQEGNAAVIAALQECGALLKEEPYVHKYPYDWRTKKPTIFRATEQWFASV 433
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + AL + EV ++P + + +A+R WCISRQR WGVPIPVFYD +T ++
Sbjct: 434 EGFRDAALRAIAEVKWIPAQGENRITAMVAERSDWCISRQRSWGVPIPVFYDKETGEPLL 493
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHV 762
I H +I + G D WW LSV +LL S D K D +D+WFDSG SW+ V
Sbjct: 494 TAETIAHVQAIIRDRGSDAWWELSVAELLPESLRDQADRYEKGTDTMDVWFDSGSSWAAV 553
Query: 763 LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
L D+ A +Y+EG DQ GWF SSLLT VA+K AP++ V HGFV+DE+G KMSKS+GNV
Sbjct: 554 LGDQQADLYLEGSDQHRGWFQSSLLTRVAVKGQAPYKAVLTHGFVLDEQGRKMSKSLGNV 613
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
++ +G K K+ P YG DVLR WV++ + VPI
Sbjct: 614 TDPREVIEGGKN--------------------QKQDPPYGADVLRLWVSSVDYAN-DVPI 652
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMD 938
GKNIL D +KIR++ R+LLG LH+ I +D YML RL E + +
Sbjct: 653 GKNILRQLADVYRKIRNTARFLLGNLHDFEPEQDMIPYAQLPALDRYMLHRLHEVFSEVT 712
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ FQ+ R + + N V +LS FY + KDRLY + G+ R S L L
Sbjct: 713 AAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDRLYISAATGDRRRSCQTVLAIALQNLA 772
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
R +AP++PHLAE+++ HLP + S F
Sbjct: 773 RAIAPVLPHLAEDIWQHLPFKTPYLSVF 800
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/392 (44%), Positives = 246/392 (62%), Gaps = 19/392 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG HIGHA+NKILKDI + LL+G++VHY PGWDCHGLPIELK + +
Sbjct: 54 FILHDGPPYANGALHIGHALNKILKDIINKYQLLRGRKVHYRPGWDCHGLPIELKVLQNL 113
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ L+PL +R++AK FAL+T+ QK F+ +GV DW H Y T +Y Q+
Sbjct: 114 KPEQRAQLTPLTLRQQAKEFALKTVAEQKQSFQRYGVWGDWAHP-YLTLTPDYEAAQIGV 172
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE-- 194
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S+Y ++ ++P L +
Sbjct: 173 FGEMVLRGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSLYAAFEVIELPQGLAKAW 232
Query: 195 --GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA----NVIVAKCLVESLKWT 248
L IWTTTPW++PAN ++ NP L Y++ V+ + ++IVAK LVE L T
Sbjct: 233 YNALGKLGVAIWTTTPWTIPANLAVSVNPDLTYALVEVQPSERYKHLIVAKDLVERLSDT 292
Query: 249 FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDD 307
++VV G L+ Y HP+ +R+ K+L G +V++ GTGLVH AP HG +D
Sbjct: 293 LGRTLKVVATAKGADLEHSRYRHPLF--EREGKILIGGDYVTTESGTGLVHTAPGHGLED 350
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQH 365
+ + +P+L+ + G ++ +AGP GLN+L +G V+ ++ +L E Y H
Sbjct: 351 YGVGQRYGLPILSPVDENGCFTAEAGP-FAGLNVLQEGNAAVIAALQECGALLKEEPYVH 409
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YPYDWRTKKP I +A++QWF E + AL
Sbjct: 410 KYPYDWRTKKPTIFRATEQWFASVEGFRDAAL 441
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 5/165 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AGP GLN+L EG V+ ++ +L E Y H YPYDWRTKKP
Sbjct: 362 LSPVDENGCFTAEAGP-FAGLNVLQEGNAAVIAALQECGALLKEEPYVHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL + V ++P + + +A+R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDAALRAIAEVKWIPAQGENRITAMVAERSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
PVFYD +T ++ I H +I + G D WW L V +LL S
Sbjct: 481 PVFYDKETGEPLLTAETIAHVQAIIRDRGSDAWWELSVAELLPES 525
>gi|22299873|ref|NP_683120.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
gi|22296058|dbj|BAC09882.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
Length = 981
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/628 (40%), Positives = 354/628 (56%), Gaps = 43/628 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y ++ ++P L + L IWTTTPW++PAN
Sbjct: 225 TALAEAELEYPEGHTSRSLYAAFEVIELPQGLAKAWYNALGKLGVAIWTTTPWTIPANLA 284
Query: 474 IAFNPALEYSVASVKGA----NVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
++ NP L Y++ V+ + ++IVAK LVE L T + VV G L+ Y HP
Sbjct: 285 VSVNPDLTYALVEVQPSERYKHLIVAKDLVERLSDTLGRTLKVVATAKGADLEHSRYRHP 344
Query: 530 INKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
+ +R+ K+L G +V++ GTGLVH AP HG +D+ + +P+L+ + G ++ +
Sbjct: 345 LF--EREGKILIGGDYVTTESGTGLVHTAPGHGLEDYGVGQRYGLPILSPVDENGCFTAE 402
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AGP GLN+L +G V+ ++ +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 403 AGP-FAGLNVLQEGNAAVIAALQECGALLKEEPYVHKYPYDWRTKKPTIFRATEQWFASV 461
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + AL + EV ++P + + +A+R WCISRQR WGVPIPVFYD +T ++
Sbjct: 462 EGFRDAALRAIAEVKWIPAQGENRITAMVAERSDWCISRQRSWGVPIPVFYDKETGEPLL 521
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHV 762
I H +I + G D WW LSV +LL S D K D +D+WFDSG SW+ V
Sbjct: 522 TAETIAHVQAIIRDRGSDAWWELSVAELLPESLRDQADRYEKGTDTMDVWFDSGSSWAAV 581
Query: 763 LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
L D+ A +Y+EG DQ GWF SSLLT VA+K AP++ V HGFV+DE+G KMSKS+GNV
Sbjct: 582 LGDQQADLYLEGSDQHRGWFQSSLLTRVAVKGQAPYKAVLTHGFVLDEQGRKMSKSLGNV 641
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
++ +G K K+ P YG DVLR WV++ + VPI
Sbjct: 642 TDPREVIEGGKN--------------------QKQDPPYGADVLRLWVSSVDYAN-DVPI 680
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMD 938
GKNIL D +KIR++ R+LLG LH+ I +D YML RL E + +
Sbjct: 681 GKNILRQLADVYRKIRNTARFLLGNLHDFEPEQDMIPYAQLPALDRYMLHRLHEVFSEVT 740
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ FQ+ R + + N V +LS FY + KDRLY + G+ R S L L
Sbjct: 741 AAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDRLYISAATGDRRRSCQTVLAIALQNLA 800
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
R +AP++PHLAE+++ HLP + S F
Sbjct: 801 RAIAPVLPHLAEDIWQHLPFKTPYLSVF 828
Score = 327 bits (838), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/392 (44%), Positives = 246/392 (62%), Gaps = 19/392 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG HIGHA+NKILKDI + LL+G++VHY PGWDCHGLPIELK + +
Sbjct: 82 FILHDGPPYANGALHIGHALNKILKDIINKYQLLRGRKVHYRPGWDCHGLPIELKVLQNL 141
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ L+PL +R++AK FAL+T+ QK F+ +GV DW H Y T +Y Q+
Sbjct: 142 KPEQRAQLTPLTLRQQAKEFALKTVAEQKQSFQRYGVWGDWAHP-YLTLTPDYEAAQIGV 200
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE-- 194
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S+Y ++ ++P L +
Sbjct: 201 FGEMVLRGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSLYAAFEVIELPQGLAKAW 260
Query: 195 --GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA----NVIVAKCLVESLKWT 248
L IWTTTPW++PAN ++ NP L Y++ V+ + ++IVAK LVE L T
Sbjct: 261 YNALGKLGVAIWTTTPWTIPANLAVSVNPDLTYALVEVQPSERYKHLIVAKDLVERLSDT 320
Query: 249 FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDD 307
++VV G L+ Y HP+ +R+ K+L G +V++ GTGLVH AP HG +D
Sbjct: 321 LGRTLKVVATAKGADLEHSRYRHPLF--EREGKILIGGDYVTTESGTGLVHTAPGHGLED 378
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQH 365
+ + +P+L+ + G ++ +AGP GLN+L +G V+ ++ +L E Y H
Sbjct: 379 YGVGQRYGLPILSPVDENGCFTAEAGP-FAGLNVLQEGNAAVIAALQECGALLKEEPYVH 437
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YPYDWRTKKP I +A++QWF E + AL
Sbjct: 438 KYPYDWRTKKPTIFRATEQWFASVEGFRDAAL 469
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 5/165 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AGP GLN+L EG V+ ++ +L E Y H YPYDWRTKKP
Sbjct: 390 LSPVDENGCFTAEAGP-FAGLNVLQEGNAAVIAALQECGALLKEEPYVHKYPYDWRTKKP 448
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL + V ++P + + +A+R WCISRQR WGVPI
Sbjct: 449 TIFRATEQWFASVEGFRDAALRAIAEVKWIPAQGENRITAMVAERSDWCISRQRSWGVPI 508
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
PVFYD +T ++ I H +I + G D WW L V +LL S
Sbjct: 509 PVFYDKETGEPLLTAETIAHVQAIIRDRGSDAWWELSVAELLPES 553
>gi|220908492|ref|YP_002483803.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
gi|254782385|sp|B8HMX3.1|SYI_CYAP4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|219865103|gb|ACL45442.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
Length = 955
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/619 (38%), Positives = 351/619 (56%), Gaps = 43/619 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH----LLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ L + A L + +L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYVSFALTSLSATAEAVLKDYLPNLKVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+A NP L Y+V G+ ++VA LVE L+ T + + GQ L+ TY HP+
Sbjct: 256 VALNPDLTYAVVEKDGSYLLVANELVERLETTLGVSLPIKTTIAGQALEHSTYQHPLFDR 315
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
Q L + +V++ GTGLVH AP HGQ+D+++ +P+L+ + G+++ +AG
Sbjct: 316 QGPLVM--GDYVTTDSGTGLVHTAPGHGQEDYVVGQHYGLPILSPVDGNGRFTEEAGQ-F 372
Query: 594 EGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
GL +L +G + V+ ++ +L E Y H YPYDWRTKKPVIL+A++QWF E +
Sbjct: 373 AGLKVLDEGNEAVIQALQQVGALLKEEAYSHKYPYDWRTKKPVILRATEQWFASVEGFRE 432
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
AL + +V ++P + + +++R WCISRQR WGVPIPVFYD +T ++N I
Sbjct: 433 AALQAIAQVQWIPAQGENRITAMVSERSDWCISRQRNWGVPIPVFYDEETGEPLLNAETI 492
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSHVLKDK- 766
H ++ E G D WW LS+E+LL + N+ K D +D+WFDSG SW+ VL+ +
Sbjct: 493 AHVQAIVAEKGSDAWWELSIEELLPQAYRNNGRRYRKGTDTMDVWFDSGSSWAAVLEQRE 552
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNV
Sbjct: 553 QLRYPAEMYLEGSDQHRGWFQSSLLTSVATHGIAPYKTVLTHGFVLDEQGRKMSKSLGNV 612
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ + +G K K+ P YG D+LR WV++ VP+
Sbjct: 613 VDPAIVIEGGKN--------------------QKEDPPYGADILRLWVSS-VDYSSDVPL 651
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMD 938
GKNIL D +KIR++ R+LLG LH+ + + +D YML R+ E ++
Sbjct: 652 GKNILKQMADIYRKIRNTARFLLGNLHDFDPANNKVEYDRLPQLDRYMLHRIVEVFTEVN 711
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ +Q+ R + + NF V +LS FY + KDRLY + + R S L L
Sbjct: 712 EAFTSYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAPDDFRRRSCQTVLWIALENLA 771
Query: 999 RTVAPIMPHLAEEVYSHLP 1017
+ +AP++PHLAE+++ LP
Sbjct: 772 KAIAPVVPHLAEDIWQFLP 790
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 245/391 (62%), Gaps = 15/391 (3%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G P FILHDGPPYANG HIGHA+NKILKDI + +LQG++V YVPGWDCHGLPIELK
Sbjct: 50 GDP-FILHDGPPYANGDLHIGHALNKILKDIINKYWMLQGRKVRYVPGWDCHGLPIELKV 108
Query: 77 I----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKN 132
+ + + L+PL +R+ AK FAL+T+ QK F+ +GV +W+ N Y T EY
Sbjct: 109 LQGMKSEQRAALTPLSLRQAAKEFALQTVERQKQSFKRYGVWGEWD-NPYLTLKPEYEAA 167
Query: 133 QLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH- 191
Q+ F + + YIYR LKPVYWSPSS+TALAE+ELEY H S+SIY+ L + A
Sbjct: 168 QIGVFGQMVLKGYIYRGLKPVYWSPSSQTALAEAELEYPEGHTSRSIYVSFALTSLSATA 227
Query: 192 ---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWT 248
L + +L IWTTTPW++P N +A NP L Y+V G+ ++VA LVE L+ T
Sbjct: 228 EAVLKDYLPNLKVAIWTTTPWTIPGNLAVALNPDLTYAVVEKDGSYLLVANELVERLETT 287
Query: 249 FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF 308
+ + GQ L+ TY HP+ Q L + +V++ GTGLVH AP HGQ+D+
Sbjct: 288 LGVSLPIKTTIAGQALEHSTYQHPLFDRQGPLVM--GDYVTTDSGTGLVHTAPGHGQEDY 345
Query: 309 LLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHS 366
++ +P+L+ + G+++ +AG GL +L +G + V+ ++ +L E Y H
Sbjct: 346 VVGQHYGLPILSPVDGNGRFTEEAGQ-FAGLKVLDEGNEAVIQALQQVGALLKEEAYSHK 404
Query: 367 YPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YPYDWRTKKPVIL+A++QWF E + AL
Sbjct: 405 YPYDWRTKKPVILRATEQWFASVEGFREAAL 435
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + G+++ +AG GL +L EG + V+ ++ +L E Y H YPYDWRTKKP
Sbjct: 356 LSPVDGNGRFTEEAGQ-FAGLKVLDEGNEAVIQALQQVGALLKEEAYSHKYPYDWRTKKP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VIL+A++QWF E + AL + V ++P + + +++R WCISRQR WGVPI
Sbjct: 415 VILRATEQWFASVEGFREAALQAIAQVQWIPAQGENRITAMVSERSDWCISRQRNWGVPI 474
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++N I H ++ E G D WW L +E+LL
Sbjct: 475 PVFYDEETGEPLLNAETIAHVQAIVAEKGSDAWWELSIEELL 516
>gi|348577007|ref|XP_003474276.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Cavia
porcellus]
Length = 982
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/620 (40%), Positives = 352/620 (56%), Gaps = 70/620 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H S+S+Y+K L P A LL+G+ L+WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHTSRSVYVKFPLRTPPPKLASLLDGSPAASVLVWTTQPWTVPANQAL 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
++P +Y+V S G IVA V L T T ++V+ F G L+D T HP+
Sbjct: 311 CYSPQSKYAVVKCSTSGNRYIVAADKVAPLGSTLDTTLEVIATFSGVDLEDGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +PV + G ++ AGP
Sbjct: 371 DKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYGVASQHSLPVDCSVDEGGTFTAAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
LEG +L +G D V+ +++ +L E HSYPYDWRTKKP+I++AS+QWF+ IK
Sbjct: 430 LEGKAVLEEGTDMVIKMLQHAKSLLKEEKLIHSYPYDWRTKKPIIIRASKQWFVKISDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
P A L+ V F+P SA + D + +RPYWCISRQR WGVPIPVF D ++N
Sbjct: 490 PTAKEVLKTVKFIPGSALNAMVDMLERRPYWCISRQRAWGVPIPVFLHRTKDECLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSN--------DILDIWFDSGISWS 760
++H L+++HG D WW+L EQLL +V S V + DILDIWFDSG SW+
Sbjct: 550 VEHVARLVEQHGSDVWWTLPPEQLL-PQEVLSQVGGPDGLEYLPGQDILDIWFDSGTSWA 608
Query: 761 HVLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
VL D A +Y+EG DQ+ GWF SSLLTS+A + APF+ V +HGF + EKG KMSKS
Sbjct: 609 SVLPGPDSRADLYLEGKDQLGGWFQSSLLTSIAARKKAPFKAVLVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q P +G D+LRWWVA ++
Sbjct: 669 LGNVIDPDVVIHGG--------------------QDESAEPPFGADILRWWVA-ESNVFT 707
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMD 938
V +G + L+++++D+ K+R++LR+LLG L + T S+ +D
Sbjct: 708 EVTLGPSALSAAREDISKLRNTLRFLLGNLAGFNPQTDSVP-----------------VD 750
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR-LYCDSINGEARLSGLHTLHNIFHVL 997
+Y VL ++++ L + + R LYC+ + R S L I VL
Sbjct: 751 GMY----------VLDQYMLHLLQSLATKVRMPRSLYCEREDDPKRRSCQTALAQILDVL 800
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
R AP++PHLAEEV+ HLP
Sbjct: 801 TRAFAPVLPHLAEEVFQHLP 820
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/418 (50%), Positives = 279/418 (66%), Gaps = 14/418 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PHIGHA+NKILKDI R ++++G ++H
Sbjct: 90 KCGFSELYSWQRER-KAKTEFCLHDGPPYANGDPHIGHALNKILKDIANRFHMMRGSKIH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE K ++ K + LSP++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIESKVLSELGGKAQNLSPMEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD EY QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+H S+
Sbjct: 209 -NNCYYTFDGEYEARQLRIFYKMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHTSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
S+Y+K L P A LL+G+ L+WTT PW++PANQ + ++P +Y+V S G
Sbjct: 268 SVYVKFPLRTPPPKLASLLDGSPAASVLVWTTQPWTVPANQALCYSPQSKYAVVKCSTSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
IVA V L T T +EV+ F G L+D T HP+ ++ LLPA V+ +K
Sbjct: 328 NRYIVAADKVAPLGSTLDTTLEVIATFSGVDLEDGTCSHPLIPDKVS-PLLPATHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +PV + G ++ AGP LEG +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYGVASQHSLPVDCSVDEGGTFTAAAGPELEGKAVLEEGTDMVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVGNILG 407
++ +L E HSYPYDWRTKKP+I++AS+QWF+ IKP A V KTV I G
Sbjct: 447 LQHAKSLLKEEKLIHSYPYDWRTKKPIIIRASKQWFVKISDIKPTAKEVLKTVKFIPG 504
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 104/159 (65%), Gaps = 4/159 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ AGP LEG +L EG D V+ +++ +L E HSYPYDWRTKKP+I+
Sbjct: 416 VDEGGTFTAAAGPELEGKAVLEEGTDMVIKMLQHAKSLLKEEKLIHSYPYDWRTKKPIII 475
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+AS+QWF+ IKP A L+ V F+P SA ++ D + +RPYWCISRQR WGVPIPVF
Sbjct: 476 RASKQWFVKISDIKPTAKEVLKTVKFIPGSALNAMVDMLERRPYWCISRQRAWGVPIPVF 535
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D ++N ++H L+++HG D WW+LP EQLL
Sbjct: 536 LHRTKDECLINSQTVEHVARLVEQHGSDVWWTLPPEQLL 574
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 1042 RILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
R LYC+ + R S L I VL R AP++PHLAEEV+ HLP
Sbjct: 774 RSLYCEREDDPKRRSCQTALAQILDVLTRAFAPVLPHLAEEVFQHLP 820
>gi|16330137|ref|NP_440865.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|383321880|ref|YP_005382733.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325049|ref|YP_005385902.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490933|ref|YP_005408609.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436200|ref|YP_005650924.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|451814296|ref|YP_007450748.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|2501011|sp|P73505.1|SYI_SYNY3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|1652625|dbj|BAA17545.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|339273232|dbj|BAK49719.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|359271199|dbj|BAL28718.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274369|dbj|BAL31887.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277539|dbj|BAL35056.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407958042|dbj|BAM51282.1| isoleucyl-tRNA synthetase [Bacillus subtilis BEST7613]
gi|451780265|gb|AGF51234.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
Length = 988
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/634 (39%), Positives = 351/634 (55%), Gaps = 48/634 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ + Q E DL IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSRSIYVSFPITQAGEKAAEILAPYIDDLAVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVASVKG-----ANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V + + +IVA LVE L TF + V G+ L++ Y H
Sbjct: 256 VALNPELTYAVVETESHIFHRSYLIVALDLVEKLSETFGVKLTVKVTLQGESLENTCYQH 315
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ +V++ GTGLVH AP HGQ+D+++ +P+L+ + G + +
Sbjct: 316 PLFDRVSPI-VIGGDYVTTESGTGLVHTAPGHGQEDYVVGQRYGLPILSPVDAAGNLTEE 374
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GLN+L D + +++ ++ +L E Y+H YPYDWRTKKP I +A++QWF
Sbjct: 375 AGK-FAGLNVLNDANEAIINALQDQKVLLKEEAYEHKYPYDWRTKKPTIFRATEQWFASV 433
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IV 704
E + +AL ++EV ++P + + + R WCISRQR WGVPIPVFYD +T ++
Sbjct: 434 EGFRDQALKAIKEVTWIPTQGENRITPMVGDRSDWCISRQRAWGVPIPVFYDEETSEPLL 493
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSHV 762
E I H +I E G D WW L+VE+LL + N+ T K D +D+WFDSG SW+ V
Sbjct: 494 TEETINHVQQIIAEKGSDAWWELTVEELLPEAYRNNGRTYRKGEDTMDVWFDSGSSWAAV 553
Query: 763 LKDK------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
K P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMS
Sbjct: 554 ANAKNRPLKYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGHKMS 613
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GNV+ + I G K K+ PAYG DVLR WVA+
Sbjct: 614 KSLGNVVDPYQIINGGK--------------------NQKQEPAYGADVLRLWVASVDYA 653
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
+ VPIG+ IL D KIR++ R+LLG LH+ + T +++ +D YML R+ E
Sbjct: 654 N-DVPIGQGILKQLVDIRNKIRNTARFLLGNLHDFNPETDAVAYEDLPELDRYMLHRMTE 712
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ Y FQ+ + + + NF V +LS FY + KDRLY + N R S L
Sbjct: 713 VFTEVTEAYESFQFFKFFQTVQNFCVVDLSNFYLDIAKDRLYISAPNAPRRRSCQTILQL 772
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ HLAE+++ LP + T S F
Sbjct: 773 ALENLTKAIAPVLCHLAEDIWQFLPYEKPTESVF 806
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/397 (43%), Positives = 240/397 (60%), Gaps = 18/397 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N K F+LHDGPPYANG H+GHA+NK+LKDI + LLQG +VHYVPGWDCHGLPIELK
Sbjct: 48 NPKDLFVLHDGPPYANGALHMGHALNKVLKDIINKYKLLQGHKVHYVPGWDCHGLPIELK 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ +S+ L+PL +R KA++FAL+ Q F+ +G+ DW+ Y T EY
Sbjct: 108 VLQSLKSSERAELTPLTLRHKARDFALKAQQEQAVGFQRYGIWGDWK-KPYLTLTPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSSRTALAE+ELEY H S+SIY+ + Q
Sbjct: 167 AQIGVFGAMALKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSRSIYVSFPITQAGEK 226
Query: 192 LLEGAT----DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-----ANVIVAKCLV 242
E DL IWTTTPW+LP N +A NP L Y+V + + +IVA LV
Sbjct: 227 AAEILAPYIDDLAVAIWTTTPWTLPGNLAVALNPELTYAVVETESHIFHRSYLIVALDLV 286
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
E L TF + V G+ L++ Y HP+ + ++ +V++ GTGLVH AP
Sbjct: 287 EKLSETFGVKLTVKVTLQGESLENTCYQHPLFDRVSPI-VIGGDYVTTESGTGLVHTAPG 345
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWT 360
HGQ+D+++ +P+L+ + G + +AG GLN+L D + +++ ++ +L
Sbjct: 346 HGQEDYVVGQRYGLPILSPVDAAGNLTEEAGK-FAGLNVLNDANEAIINALQDQKVLLKE 404
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y+H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 405 EAYEHKYPYDWRTKKPTIFRATEQWFASVEGFRDQAL 441
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 5/172 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + G + +AG GLN+L + + +++ ++ +L E Y+H YPYDWRTKKP
Sbjct: 362 LSPVDAAGNLTEEAGK-FAGLNVLNDANEAIINALQDQKVLLKEEAYEHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + +AL ++ V ++P + + + R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDQALKAIKEVTWIPTQGENRITPMVGDRSDWCISRQRAWGVPI 480
Query: 1224 PVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
PVFYD +T ++ E I H +I E G D WW L VE+LL + N+ T
Sbjct: 481 PVFYDEETSEPLLTEETINHVQQIIAEKGSDAWWELTVEELLPEAYRNNGRT 532
>gi|428221446|ref|YP_007105616.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7502]
gi|427994786|gb|AFY73481.1| Isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7502]
Length = 946
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/629 (39%), Positives = 355/629 (56%), Gaps = 44/629 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPA--HLLEGA---TDLHALIWTTTPWSLPANQ 472
TALAE+ELEY DH+SKSIY+ + ++ L+ G ++LHA+IWTTTPW++PAN
Sbjct: 203 TALAEAELEYPEDHVSKSIYVAFPVTKISDTFQLVLGDRQFSNLHAVIWTTTPWTIPANL 262
Query: 473 FIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
I+ NP L YS+ + I+A LV+ L TF ++ + F G+ L+ HPI
Sbjct: 263 GISANPHLNYSIVLAGEKHYIIATDLVDKLSATFGEELSIQLTFKGEVLEHTIAQHPIF- 321
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R +L V++ GTGLVH AP HG+DDF++ + VL+ + + G ++ +AG
Sbjct: 322 -DRLSPILLGDHVTAESGTGLVHTAPGHGKDDFIVGNRYGLGVLSPVNDYGIFTEEAGQ- 379
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
GLN+L +G +V+ ++ ++ TE+Y+H YPYDWRTKKP I++A++QWF + +
Sbjct: 380 FSGLNVLKEGNTKVIEVLSELGALVKTEDYKHKYPYDWRTKKPTIVRATEQWFASVDGFR 439
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
AL ++EVN++P + + + +R WCISRQR WGVPIPVFYD DT +
Sbjct: 440 DIALGAIKEVNWIPAIGENRITAMVQERSDWCISRQRSWGVPIPVFYDMDTNEPLFTPET 499
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSHVLKDK 766
I H + G D WW LS+E+LL N+ N K D +D+WFDSG SWS V+K +
Sbjct: 500 IAHIQEIFRVKGSDAWWELSLEELLPQEYQNNGKNYRKGTDTMDVWFDSGSSWSAVIKQR 559
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLTS A AP++ V HGF VDE G KMSKS+GN
Sbjct: 560 EELKYPADLYLEGSDQHRGWFQSSLLTSCATNGIAPYKTVLTHGFTVDENGRKMSKSLGN 619
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
+ I G K L ++ PAYG DVLR WVA+ VP
Sbjct: 620 GVDPMVIINGGKNL--------------------QQEPAYGADVLRLWVAS-VDYSSDVP 658
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I KNIL D KIR++ R+LL L + + S +I+ + D Y+L RL E +
Sbjct: 659 ISKNILKQISDVSFKIRNTARFLLSNLFDFNPSENAIAFEELQESDCYLLHRLYEITQEI 718
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y FQ++R +++ NF V +LS+FY + KDRLY + N R + L +
Sbjct: 719 TEAYNNFQFSRFFQLIQNFCVVDLSSFYLDIAKDRLYISAANSPRRRACQTVLALTVQAI 778
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ HLP T S F
Sbjct: 779 ATLIAPVLSHLAEDIWQHLPYPVSTKSVF 807
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 182/395 (46%), Positives = 253/395 (64%), Gaps = 15/395 (3%)
Query: 14 ALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE 73
A N +FILHDGPPYANG+ H+GHA+NKILKDI R +L+G++V YV GWDCHGLPIE
Sbjct: 53 ANNSGEKFILHDGPPYANGSLHMGHALNKILKDIINRYQILRGRKVRYVLGWDCHGLPIE 112
Query: 74 LKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
LK I + + K L+PL++R+KAK+FA I Q F+ WGV D+E N Y+T EY
Sbjct: 113 LKVIQNLKPEERKALTPLELRRKAKDFAYSAIAEQSTGFKRWGVWGDYE-NAYYTLKPEY 171
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + YIYR LKPVYWSPSS+TALAE+ELEY DHVSKSIY+ + ++
Sbjct: 172 EAAQIGVFGKMALNGYIYRGLKPVYWSPSSQTALAEAELEYPEDHVSKSIYVAFPVTKIS 231
Query: 190 A--HLLEGA---TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
L+ G ++LHA+IWTTTPW++PAN I+ NP L YS+ + I+A LV+
Sbjct: 232 DTFQLVLGDRQFSNLHAVIWTTTPWTIPANLGISANPHLNYSIVLAGEKHYIIATDLVDK 291
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
L TF ++ + F G+ L+ HPI R +L V++ GTGLVH AP HG
Sbjct: 292 LSATFGEELSIQLTFKGEVLEHTIAQHPIF--DRLSPILLGDHVTAESGTGLVHTAPGHG 349
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTEN 362
+DDF++ + VL+ + + G ++ +AG GLN+L +G +V+ ++ ++ TE+
Sbjct: 350 KDDFIVGNRYGLGVLSPVNDYGIFTEEAGQ-FSGLNVLKEGNTKVIEVLSELGALVKTED 408
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y+H YPYDWRTKKP I++A++QWF + + AL
Sbjct: 409 YKHKYPYDWRTKKPTIVRATEQWFASVDGFRDIAL 443
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ +AG GLN+L EG +V+ ++ ++ TE+Y+H YPYDWRTKKP
Sbjct: 364 LSPVNDYGIFTEEAGQ-FSGLNVLKEGNTKVIEVLSELGALVKTEDYKHKYPYDWRTKKP 422
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I++A++QWF + + AL ++ VN++P + + + +R WCISRQR WGVPI
Sbjct: 423 TIVRATEQWFASVDGFRDIALGAIKEVNWIPAIGENRITAMVQERSDWCISRQRSWGVPI 482
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD DT + I H + G D WW L +E+LL
Sbjct: 483 PVFYDMDTNEPLFTPETIAHIQEIFRVKGSDAWWELSLEELL 524
>gi|219109559|ref|XP_002176534.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411069|gb|EEC50997.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1052
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/638 (39%), Positives = 355/638 (55%), Gaps = 52/638 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN---QVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+SKSIY+ ++ +V A L IWTTTPW++PAN +
Sbjct: 253 TALAEAELEYPEGHVSKSIYVAFNVDTPSEVLASFHSTEEPLKVAIWTTTPWTMPANMAV 312
Query: 475 AFNPALEYSVAS-VKGANVIVAKCLVENLKWTFQ----TDIDVVCDFPGQYLQDITYIHP 529
A NP L YSV K ++VA L +L F +D++ FPG+ L Y HP
Sbjct: 313 AVNPELSYSVVQHEKTGKLLVATDLASSLARKFDLPEDETLDILATFPGKDLVGTIYKHP 372
Query: 530 INKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
+ R +L G ++++ GTGLVH AP HGQ+D+L L + +L+ + + GK++ +
Sbjct: 373 MY--DRKSPVLAGGDYITTESGTGLVHTAPGHGQEDYLTGLKNGLEILSPVDDVGKFTIE 430
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG G+ +L +G ++ ++ +L E+Y H YPYDWRTKKP I +A+ QWF
Sbjct: 431 AGERYVGMRVLAEGNLAMIDALQEAGSLLKAEDYGHKYPYDWRTKKPTIFRATDQWFASV 490
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTII 703
+ +AL +E+V +VPE K +R + R WCISRQR WGVPIPVFYD G ++
Sbjct: 491 AGFRDQALDAVEKVKWVPEVGKNRIRSFVDGRGDWCISRQRSWGVPIPVFYDKATGKEVL 550
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSH 761
+N+ + H TL EHG D WW + +LL K D +D+WFDSG SW+
Sbjct: 551 LNKDTLAHVQTLFAEHGSDCWWKMDESELLPEKFRAEADKWQKGTDTMDVWFDSGSSWAG 610
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V + + PA +Y+EG DQ GWF SSLLTSVA + AP++ V HGFV+DEKG KMS
Sbjct: 611 VAQSRDELAYPADMYLEGSDQHRGWFQSSLLTSVANNNIAPYKTVLTHGFVLDEKGFKMS 670
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GNV+ + +G GN K+ PAYG DVLR WV A++
Sbjct: 671 KSLGNVVDPLKVIEG-----------GN---------NKKQDPAYGADVLRLWV-ANSDY 709
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYV--------DVYMLK 928
V IG NI+ + D +K+R++ RYL+G L + S + S V D +ML
Sbjct: 710 SGDVLIGDNIIKQTFDSYRKLRNTARYLIGNLADFVPSDSTDSNAVAYDDLPSMDKWMLG 769
Query: 929 RLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLH 988
RL T++ +FQY RA + LL F +LS FY + KDRLY +++ R S
Sbjct: 770 RLSAVLRTVNEAMDDFQYQRAIQELLRFASADLSNFYLDVAKDRLYISAMDDARRRSCQT 829
Query: 989 TLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L+ + ++PI+PH+AE+++ +LP ++ T S F
Sbjct: 830 VLYACLEGFTKAISPILPHMAEDIWQNLPYQKSTDSVF 867
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 246/409 (60%), Gaps = 20/409 (4%)
Query: 4 FSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
+ +L S +EA G F+LHDGPPYANG H GHA+NKILKD R +L GK+VHY+P
Sbjct: 95 YHKLSSQAKEA--GAERFVLHDGPPYANGDLHCGHALNKILKDFINRKQILNGKQVHYIP 152
Query: 64 GWDCHGLPIELKAI-TSKDK---LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
GWDCHGLPIELK + T K K L+P+ +R+KA FA ET+ Q F+ +G+ D+E
Sbjct: 153 GWDCHGLPIELKVLQTMKSKEREALTPVTLREKAAEFAKETVEKQSVAFQRYGIFGDFE- 211
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
Y T E+ Q+ F ++++ YI+R KPV+WSPSSRTALAE+ELEY HVSKSI
Sbjct: 212 KPYLTLQPEFEAAQIRVFGEMFQKGYIFRGRKPVHWSPSSRTALAEAELEYPEGHVSKSI 271
Query: 180 YLKIKLN---QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS-VKGANV 235
Y+ ++ +V A L IWTTTPW++PAN +A NP L YSV K +
Sbjct: 272 YVAFNVDTPSEVLASFHSTEEPLKVAIWTTTPWTMPANMAVAVNPELSYSVVQHEKTGKL 331
Query: 236 IVAKCLVESLKWTF----QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSS 290
+VA L SL F ++++ FPG+ L Y HP+ R +L G ++++
Sbjct: 332 LVATDLASSLARKFDLPEDETLDILATFPGKDLVGTIYKHPMY--DRKSPVLAGGDYITT 389
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL 350
GTGLVH AP HGQ+D+L L + +L+ + + GK++ +AG G+ +L +G ++
Sbjct: 390 ESGTGLVHTAPGHGQEDYLTGLKNGLEILSPVDDVGKFTIEAGERYVGMRVLAEGNLAMI 449
Query: 351 HLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ +L E+Y H YPYDWRTKKP I +A+ QWF + +AL
Sbjct: 450 DALQEAGSLLKAEDYGHKYPYDWRTKKPTIFRATDQWFASVAGFRDQAL 498
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + + GK++ +AG G+ +L EG ++ ++ +L E+Y H YPYDWRTKKP
Sbjct: 418 LSPVDDVGKFTIEAGERYVGMRVLAEGNLAMIDALQEAGSLLKAEDYGHKYPYDWRTKKP 477
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A+ QWF + +AL +E V +VPE K +R + R WCISRQR WGVPI
Sbjct: 478 TIFRATDQWFASVAGFRDQALDAVEKVKWVPEVGKNRIRSFVDGRGDWCISRQRSWGVPI 537
Query: 1224 PVFYD---GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD G +++N+ + H TL EHG D WW + +LL
Sbjct: 538 PVFYDKATGKEVLLNKDTLAHVQTLFAEHGSDCWWKMDESELL 580
>gi|428176696|gb|EKX45579.1| hypothetical protein GUITHDRAFT_71180 [Guillardia theta CCMP2712]
Length = 988
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/657 (37%), Positives = 354/657 (53%), Gaps = 46/657 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY H S+S+Y + + + + +L IWTTTPW++PAN +A N
Sbjct: 211 TALAEAELEYPEGHKSRSMYAAFTVVEPSEAVKPHSENLKVAIWTTTPWTIPANLAVAVN 270
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDV--VCDFPGQYLQDITYIHPIN 531
LEYS+ G +VAK L LK + ++++ + G+ L Y HP+
Sbjct: 271 EKLEYSIVEHHGVKYVVAKDLKGALAAKLKKGEEDEVELKEIAVITGKELAGTKYQHPLY 330
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
KE+ + ++ ++++ GTGLVH AP HG +D+ L + +L+ + + G+++ +AGP
Sbjct: 331 KERINPVVIGGDYITTESGTGLVHTAPGHGVEDYQTGLKYGLELLSPVDDAGRFTAEAGP 390
Query: 592 GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
LEG ++L DG ++VL L+E ++ E Y H YPYDWRTKKP I +A+ QWF E
Sbjct: 391 LLEGKDVLKDGNERVLELMEEAGALIKEEEYGHKYPYDWRTKKPTIFRATDQWFASVENF 450
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
+ +A+ ++ V ++PE K + + R WCISRQR WGVPIPVFY +T ++
Sbjct: 451 REKAMGAIDTVKWIPEVGKNRISAMVEGRSDWCISRQRSWGVPIPVFYHKETGEPLLTAE 510
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSHVLK- 764
+I H +I EHG D WW V +LL S + D +D+WFDSG SW+ V+K
Sbjct: 511 SIDHIRDIIAEHGSDAWWEKDVAELLPPSHKQEADKWERGRDTMDVWFDSGSSWNGVVKS 570
Query: 765 -------DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
D PA +Y+EG DQ GWF SSLLTSVA + TAP++ V HGFV+DEKG KMSK
Sbjct: 571 WGEGKALDFPADMYLEGSDQHRGWFQSSLLTSVAAQGTAPYKTVLTHGFVLDEKGFKMSK 630
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNV+ + G K K PA+G D LR WVA+
Sbjct: 631 SLGNVVDPALVINGGKN--------------------QKTEPAFGADTLRLWVAS-VDYT 669
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
V +G NI+ D +KIR++LRYLLG LH S+ VD +ML RL
Sbjct: 670 GDVRVGGNIMKQISDSYRKIRNTLRYLLGNLHGFDPKKHSVKYEDLPSVDKWMLGRLARV 729
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Q + Y FQ+ RA + +L + ELS FY + KDRLY + + R S LH
Sbjct: 730 QEEVRDAYDTFQFYRAYQAILQVCITELSNFYLDIAKDRLYISAEDDVRRRSCQTVLHAA 789
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSIN 1050
+L ++P++PH+AE+ + +LP S F H L Y +R Y S+
Sbjct: 790 LEMLTTAISPMLPHMAEDAWQNLPWEH-VSSVFEHGWKQLDYPSHEGERWDYIRSLR 845
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 241/394 (61%), Gaps = 13/394 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N +F+LHDGPPYANG HIGHA+NKILKD R ++ G +V +VPGWDCHGLPIELK
Sbjct: 63 NPGTKFVLHDGPPYANGNLHIGHALNKILKDFINRYKVISGHKVKFVPGWDCHGLPIELK 122
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S K ++P+ +RKKA FA +T++ Q+ F+ +GV ADW Y T D +Y
Sbjct: 123 VLQSLKKEEKENMTPISLRKKAAEFAKQTVDQQRESFKRYGVWADWSE-PYLTLDPKYEA 181
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + K +IYR KPV WSPSSRTALAE+ELEY H S+S+Y + +
Sbjct: 182 AQIETFGAMLKGGHIYRGRKPVNWSPSSRTALAEAELEYPEGHKSRSMYAAFTVVEPSEA 241
Query: 192 LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK----CLVESLKW 247
+ + +L IWTTTPW++PAN +A N LEYS+ G +VAK L LK
Sbjct: 242 VKPHSENLKVAIWTTTPWTIPANLAVAVNEKLEYSIVEHHGVKYVVAKDLKGALAAKLKK 301
Query: 248 TFQTDIEV--VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
+ ++E+ + G+ L Y HP+ KE+ + ++ ++++ GTGLVH AP HG
Sbjct: 302 GEEDEVELKEIAVITGKELAGTKYQHPLYKERINPVVIGGDYITTESGTGLVHTAPGHGV 361
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
+D+ L + +L+ + + G+++ +AGP LEG ++L DG ++VL L+E ++ E Y
Sbjct: 362 EDYQTGLKYGLELLSPVDDAGRFTAEAGPLLEGKDVLKDGNERVLELMEEAGALIKEEEY 421
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YPYDWRTKKP I +A+ QWF E + +A+
Sbjct: 422 GHKYPYDWRTKKPTIFRATDQWFASVENFREKAM 455
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + + G+++ +AGP LEG ++L +G ++VL L+E ++ E Y H YPYDWRTKKP
Sbjct: 375 LSPVDDAGRFTAEAGPLLEGKDVLKDGNERVLELMEEAGALIKEEEYGHKYPYDWRTKKP 434
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A+ QWF E + +A+ ++ V ++PE K + + R WCISRQR WGVPI
Sbjct: 435 TIFRATDQWFASVENFREKAMGAIDTVKWIPEVGKNRISAMVEGRSDWCISRQRSWGVPI 494
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY +T ++ +I H +I EHG D WW V +LL
Sbjct: 495 PVFYHKETGEPLLTAESIDHIRDIIAEHGSDAWWEKDVAELL 536
>gi|334118453|ref|ZP_08492542.1| Isoleucyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
gi|333459460|gb|EGK88073.1| Isoleucyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
Length = 1197
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/626 (39%), Positives = 351/626 (56%), Gaps = 59/626 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ + ++ L L A IWTTTPW++PAN
Sbjct: 195 TALAEAELEYPEGHTSRSIYVGFHVKKLSKSLQTKLKRYMPSLWAAIWTTTPWTIPANLA 254
Query: 474 IAFNPALEYSV------ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYI 527
IA NP L Y+V A + ++VA V+ L TF T++ ++ F G+ L+ +Y
Sbjct: 255 IAVNPELTYAVVEPPGNAHIAQQFILVAVDAVDRLSATFNTNLKILATFKGKELEGCSYK 314
Query: 528 HPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
HP+ R+ ++ G ++++ GTGLVH AP HGQ+DF++ +PVL + G ++
Sbjct: 315 HPLF--DRESPIVAGGDYITADSGTGLVHTAPGHGQEDFIVGKRCGLPVLTPVDENGNFT 372
Query: 587 PDAGPGLEGLNILGDGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFI 644
+AG + GLN+LG+G V+ L E + L E +Y HSYPYDWRTKKP I +A++QWF
Sbjct: 373 AEAGQFV-GLNVLGNGNAAVIDALGEANCLIKEESYAHSYPYDWRTKKPTIFRATEQWFA 431
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--I 702
E + EAL + +VN++P + + + R WCISRQR WGVPIPVFYD +T
Sbjct: 432 SVEGFRDEALKAIADVNWIPAQGENRITAMVGDRSDWCISRQRTWGVPIPVFYDEETNEP 491
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWS 760
++NE I H L E G D WW LS+ +LL S N+ T K D +D+WFDSG SW+
Sbjct: 492 LLNEETIAHVQALFAEKGSDAWWELSIAELLPESYRNNGRTYRKGTDTMDVWFDSGSSWA 551
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V + + PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG KM
Sbjct: 552 AVAQGRSELNYPADIYLEGSDQHRGWFQSSLLTSVATNGVAPYKTVLTHGFVLDEKGRKM 611
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS GNV+ A + YG DVLR WV++
Sbjct: 612 SKSEGNVVDP-----------------------------AAVIKEYGADVLRLWVSS-VD 641
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLC 931
VP+GKNIL D +KIR++ ++LLG LH+ + +++ +D YML R+C
Sbjct: 642 YSADVPLGKNILKQQSDVYRKIRNTAKFLLGNLHDFDPAKDAVAYEELPELDRYMLHRMC 701
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
E + + FQ++R + + NF +LS FY + KDRLY + + R S +
Sbjct: 702 EVFAEVQDAFESFQFSRFFQTVQNFCTVDLSNFYLDIAKDRLYISATDTRRRRSCQTVIA 761
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L R +AP++ H+AE+++ +LP
Sbjct: 762 IAVENLARAIAPVLCHMAEDIWQYLP 787
Score = 339 bits (869), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 181/394 (45%), Positives = 250/394 (63%), Gaps = 21/394 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKD R +L+GK+V YVPGWDCHGLPIELK +
Sbjct: 52 FILHDGPPYANGQLHIGHALNKILKDFINRYQMLRGKKVRYVPGWDCHGLPIELKVLQNM 111
Query: 78 TSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
S+++L L+P+++R KA FA +T+ Q+ F+ +GV DWEH Y T EY Q+
Sbjct: 112 KSEERLNLTPIELRHKAATFAQQTMEQQRESFQRYGVWGDWEHP-YLTMKPEYEAAQIGV 170
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG- 195
F + + YIYR KPV+WSPSS+TALAE+ELEY H S+SIY+ + ++ L
Sbjct: 171 FGQMVLKGYIYRGFKPVHWSPSSKTALAEAELEYPEGHTSRSIYVGFHVKKLSKSLQTKL 230
Query: 196 ---ATDLHALIWTTTPWSLPANQFIAFNPALEYSV------ASVKGANVIVAKCLVESLK 246
L A IWTTTPW++PAN IA NP L Y+V A + ++VA V+ L
Sbjct: 231 KRYMPSLWAAIWTTTPWTIPANLAIAVNPELTYAVVEPPGNAHIAQQFILVAVDAVDRLS 290
Query: 247 WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQ 305
TF T+++++ F G+ L+ +Y HP+ R+ ++ G ++++ GTGLVH AP HGQ
Sbjct: 291 ATFNTNLKILATFKGKELEGCSYKHPLF--DRESPIVAGGDYITADSGTGLVHTAPGHGQ 348
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-ENY 363
+DF++ +PVL + G ++ +AG + GLN+LG+G V+ L E + L E+Y
Sbjct: 349 EDFIVGKRCGLPVLTPVDENGNFTAEAGQFV-GLNVLGNGNAAVIDALGEANCLIKEESY 407
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYPYDWRTKKP I +A++QWF E + EAL
Sbjct: 408 AHSYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 441
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 5/172 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKP 1163
L + G ++ +AG + GLN+LG G V+ L E + L E +Y HSYPYDWRTKKP
Sbjct: 362 LTPVDENGNFTAEAGQFV-GLNVLGNGNAAVIDALGEANCLIKEESYAHSYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EAL + VN++P + + + R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDEALKAIADVNWIPAQGENRITAMVGDRSDWCISRQRTWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
PVFYD +T ++NE I H L E G D WW L + +LL S N+ T
Sbjct: 481 PVFYDEETNEPLLNEETIAHVQALFAEKGSDAWWELSIAELLPESYRNNGRT 532
>gi|427713712|ref|YP_007062336.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 6312]
gi|427377841|gb|AFY61793.1| Isoleucyl-tRNA synthetase [Synechococcus sp. PCC 6312]
Length = 955
Score = 438 bits (1126), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/624 (39%), Positives = 355/624 (56%), Gaps = 49/624 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN------QVPAHLLEGATDLHALIWTTTPWSLPAN 471
TALAE+ELEY H+S+S+Y ++ Q+P G +L IWTTTPW++P N
Sbjct: 195 TALAEAELEYPEGHVSQSLYAAFEVTFLSQPLQLPLDSFLG--ELGVAIWTTTPWTIPGN 252
Query: 472 QFIAFNPALEYSVASV------KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
++ NP L Y+V V + +IVAK LVE L+ T + + G+ L+
Sbjct: 253 LGVSVNPELVYAVVEVGQDAPGRFKYLIVAKDLVEQLETVLGTTLTIQATVMGKTLEHTR 312
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
Y HP+ + + ++ L+ +V++ GTGLVH AP HG +D+ + +P+L+ + ++G +
Sbjct: 313 YRHPLFERESEV-LIGGDYVTTESGTGLVHTAPGHGLEDYGVGQRYGLPILSPVDDRGSF 371
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
+ +AG GLN+LG+G ++ +E +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 372 TEEAGE-FAGLNVLGEGNTAIIKALEEVGALLKQEPYNHKYPYDWRTKKPTIFRATEQWF 430
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
+ AL + +V ++P + + +A+R WCISRQR WGVPIPVFY +T
Sbjct: 431 ASVAGFRDAALEAIAQVKWIPAQGENRITSMVAERSDWCISRQRSWGVPIPVFYHTETNE 490
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISW 759
++N I H LI EHG D WW LSV +LL S +V K D +D+WFDSG SW
Sbjct: 491 PLLNSETIAHVQALIAEHGSDIWWELSVAELLPDSYQEVADQYRKGLDTMDVWFDSGSSW 550
Query: 760 SHVLKDK--PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
+ VL + PA++Y+EG DQ GWF SSLLTSVA+K AP+++V HGFV+DE+G KMSK
Sbjct: 551 AAVLGEDLYPANLYLEGSDQHRGWFQSSLLTSVAVKGQAPYKSVLTHGFVLDEQGRKMSK 610
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNV+ + +G K K+ PAYG DVLR WV++
Sbjct: 611 SLGNVVDPKIVIEGGKN--------------------QKEDPAYGADVLRLWVSS-VDYS 649
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
VP+GKNIL D +KIR++ R+LLG LH+ S +I +D YML R+ E
Sbjct: 650 TDVPVGKNILKQLSDVYRKIRNTARFLLGNLHDFDPSQDAIPYAQLPELDRYMLHRISEV 709
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + +Q+ R + + NF V +LS FY + KDRLY +++ R S L
Sbjct: 710 FTDVTNAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAVDAPRRRSCQTVLAIA 769
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLP 1017
L + +AP++ HLAE+++ LP
Sbjct: 770 LENLAKAIAPVLCHLAEDIWQFLP 793
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/400 (42%), Positives = 245/400 (61%), Gaps = 23/400 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG HIGHA+NK LKDI + LLQG++V Y+PGWDCHGLPIELK
Sbjct: 47 NPGPRFTLHDGPPYANGALHIGHAMNKTLKDIINKYQLLQGQKVTYIPGWDCHGLPIELK 106
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + + + L L +R+KAK FAL+T++ Q+ F+ +GV +W+H Y T + Y
Sbjct: 107 VLQNLKPEERRGLDALGLRQKAKEFALKTVDEQRQSFQRYGVWGNWDH-PYLTLNPAYEA 165
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN----- 186
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY HVS+S+Y ++
Sbjct: 166 AQIGVFGEMVLKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHVSQSLYAAFEVTFLSQP 225
Query: 187 -QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV------KGANVIVAK 239
Q+P G +L IWTTTPW++P N ++ NP L Y+V V + +IVAK
Sbjct: 226 LQLPLDSFLG--ELGVAIWTTTPWTIPGNLGVSVNPELVYAVVEVGQDAPGRFKYLIVAK 283
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
LVE L+ T + + G+ L+ Y HP+ + + ++ L+ +V++ GTGLVH
Sbjct: 284 DLVEQLETVLGTTLTIQATVMGKTLEHTRYRHPLFERESEV-LIGGDYVTTESGTGLVHT 342
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP HG +D+ + +P+L+ + ++G ++ +AG GLN+LG+G ++ +E +
Sbjct: 343 APGHGLEDYGVGQRYGLPILSPVDDRGSFTEEAGE-FAGLNVLGEGNTAIIKALEEVGAL 401
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E Y H YPYDWRTKKP I +A++QWF + AL
Sbjct: 402 LKQEPYNHKYPYDWRTKKPTIFRATEQWFASVAGFRDAAL 441
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+LGEG ++ +E +L E Y H YPYDWRTKKP
Sbjct: 362 LSPVDDRGSFTEEAGE-FAGLNVLGEGNTAIIKALEEVGALLKQEPYNHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF + AL + V ++P + + +A+R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVAGFRDAALEAIAQVKWIPAQGENRITSMVAERSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
PVFY +T ++N I H LI EHG D WW L V +LL S
Sbjct: 481 PVFYHTETNEPLLNSETIAHVQALIAEHGSDIWWELSVAELLPDS 525
>gi|452820529|gb|EME27570.1| isoleucyl-tRNA synthetase [Galdieria sulphuraria]
Length = 1039
Score = 438 bits (1126), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/626 (40%), Positives = 360/626 (57%), Gaps = 46/626 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE---GATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY DHIS +IY+ ++ V + L + + L +IWTTTPW+LPAN+ +
Sbjct: 266 TALAEAELEYSEDHISTAIYVSFRIAHVNSLLGDLPISSNSLELVIWTTTPWTLPANEAV 325
Query: 475 AFNPALEYSVASVKGAN--VIVAK-CL---VENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
A NP + YS+ V N +IVAK CL E LK +Q D V ++ G+ L I Y H
Sbjct: 326 AVNPHMTYSLIEVARLNRFLIVAKDCLKRVREKLKLEWQ-DCRQVLEWTGESLVGIKYYH 384
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
PI K++ + +++S GTGLVH AP HG++DF++ E +P+ + G ++ +
Sbjct: 385 PIIKDKICRVVRGGNYITSESGTGLVHTAPGHGEEDFVVGKRENLPISCPVDENGMFTKE 444
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG L G ++LG G VL LVE +L E Y+H YPYDWRTK+P I + ++QWF
Sbjct: 445 AGEVLFGHSVLGQGNKLVLELVENMNLLLAKECYRHKYPYDWRTKEPTIYRTTEQWFASL 504
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTII 703
E + E L +++V ++PES K +R + +R WCISRQR WGVPIPVFYD G+ +
Sbjct: 505 ENFRKEVLDSIDQVTWIPESKKNLIRCMVMERSDWCISRQRAWGVPIPVFYDVSNGNIPV 564
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
++E ++H +I E G D W+ +S E+LL N ++ K D +D+WFDSG SW+ L
Sbjct: 565 LDEEILEHISHIIKEKGSDAWFYMSEEELLPAKHKNRHLVKGMDTMDVWFDSGCSWA-AL 623
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ K PA +Y+EG DQ GWF SSLLT VA K AP+ HGFV+DEKG KMSKS
Sbjct: 624 ESKGYLKIPADLYLEGGDQHRGWFQSSLLTCVATKGRAPYLKAITHGFVLDEKGVKMSKS 683
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
VGNVI + G GN KK PAYG DVLR WVA+ ++
Sbjct: 684 VGNVIDPQVVVNG-----------GN---------NQKKDPAYGADVLRLWVASVDYRN- 722
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V IG I+ D +KIR++LR+++G L++ + +I +D+YML +F+
Sbjct: 723 EVLIGPQIIRQVADIYRKIRNTLRFMVGNLYDFRKDVNAIPLAELPQLDIYMLTVFNKFK 782
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
++++ Y + + + + + ELS FY + KDRLY + R S LH I
Sbjct: 783 KSVESAYERYDFTSIYQAIQRLCITELSNFYLDISKDRLYVSLPDDYRRRSCQTVLHMIL 842
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQ 1020
L+R VAP++PH AE+++ R+
Sbjct: 843 EDLVRIVAPLIPHTAEDLWQCFEFRR 868
Score = 322 bits (826), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/397 (44%), Positives = 244/397 (61%), Gaps = 17/397 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F+LHDGPPYANGT H+GHA+NKILKDI R +LL+G ++PGWDCHGLPIELK
Sbjct: 118 NQHKTFVLHDGPPYANGTLHVGHALNKILKDIICRYHLLRGFYACFIPGWDCHGLPIELK 177
Query: 76 AITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
S K +S +++R++A FA TI QK+ F+ +G+ W Y T EY
Sbjct: 178 VWQSIPKENHDKVSVIELRRRAAEFARNTIEEQKSSFKRFGIWGFWSRP-YLTMSPEYEA 236
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F L+ + +IYR KPV+WSPSS+TALAE+ELEY DH+S +IY+ ++ V +
Sbjct: 237 AQIQVFGELFLRGFIYRARKPVHWSPSSKTALAEAELEYSEDHISTAIYVSFRIAHVNSL 296
Query: 192 LLE---GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAK-CL---V 242
L + + L +IWTTTPW+LPAN+ +A NP + YS+ V N +IVAK CL
Sbjct: 297 LGDLPISSNSLELVIWTTTPWTLPANEAVAVNPHMTYSLIEVARLNRFLIVAKDCLKRVR 356
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
E LK +Q D V ++ G+ L I Y HPI K++ + +++S GTGLVH AP
Sbjct: 357 EKLKLEWQ-DCRQVLEWTGESLVGIKYYHPIIKDKICRVVRGGNYITSESGTGLVHTAPG 415
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWT 360
HG++DF++ E +P+ + G ++ +AG L G ++LG G VL LVE +L
Sbjct: 416 HGEEDFVVGKRENLPISCPVDENGMFTKEAGEVLFGHSVLGQGNKLVLELVENMNLLLAK 475
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y+H YPYDWRTK+P I + ++QWF E + E L
Sbjct: 476 ECYRHKYPYDWRTKEPTIYRTTEQWFASLENFRKEVL 512
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ +AG L G ++LG+G VL LVE +L E Y+H YPYDWRTK+P I
Sbjct: 435 VDENGMFTKEAGEVLFGHSVLGQGNKLVLELVENMNLLLAKECYRHKYPYDWRTKEPTIY 494
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+ ++QWF E + E L ++ V ++PES K +R + +R WCISRQR WGVPIPVF
Sbjct: 495 RTTEQWFASLENFRKEVLDSIDQVTWIPESKKNLIRCMVMERSDWCISRQRAWGVPIPVF 554
Query: 1227 YD---GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
YD G+ +++E ++H +I E G D W+ + E+LL N ++ K
Sbjct: 555 YDVSNGNIPVLDEEILEHISHIIKEKGSDAWFYMSEEELLPAKHKNRHLVK 605
>gi|443326538|ref|ZP_21055189.1| Isoleucyl-tRNA synthetase [Xenococcus sp. PCC 7305]
gi|442793860|gb|ELS03296.1| Isoleucyl-tRNA synthetase [Xenococcus sp. PCC 7305]
Length = 959
Score = 437 bits (1125), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/634 (39%), Positives = 351/634 (55%), Gaps = 49/634 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H S SIY I L L + +L IWTTTPW++P N +
Sbjct: 196 TALAEAELEYPEGHTSPSIYAAFPVISLGDKAQELEQYLPNLAVAIWTTTPWTIPGNLAV 255
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
A N LEY+VA G ++IVAK LVE L TF+TD+ + G+ L+ ITY HP+
Sbjct: 256 AVNGDLEYAVAETSGKHIIVAKDLVEQLATTFETDLTIKTTVLGKVLEGITYHHPLF--D 313
Query: 535 RDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD K++ G ++++ GTGLVH AP HGQ+D++ +P+L+ + + GK++ +AG
Sbjct: 314 RDSKVVIGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLPILSPVDDSGKFTEEAG-NF 372
Query: 594 EGLNILGDGKDQVLH--------LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFI 644
GL ++ G ++V L E L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 373 AGLQVVAKGNEKVSAGNQAIIDALQEAGTLLKHEEYAHKYPYDWRTKKPTIFRATEQWFA 432
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--I 702
E + AL ++ V ++P + + + ++ R WCISRQR WGVPIPVFYD +T
Sbjct: 433 SVEGFRDAALDAIKSVTWIPAAGENRITPMVSDRSDWCISRQRSWGVPIPVFYDEETNEA 492
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWS 760
++ E I H +I E G D WW LSVE+LL + N+ T KS D +D+WFDSG SW+
Sbjct: 493 LLTEETINHVQAIIAEKGSDAWWELSVEELLPETYHNNGKTYRKSTDTMDVWFDSGSSWA 552
Query: 761 HVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + P +Y+EG DQ GWF SSLLTSVA+ TAP++ V HG+VVD G KMS
Sbjct: 553 SVAKARGLKYPVDMYLEGSDQHRGWFQSSLLTSVAVNDTAPYKTVLTHGYVVDSNGRKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN + I +G GN K+ P YG DVLR WV++
Sbjct: 613 KSLGNGVDPKVIIEG-----------GN---------NKKQEPPYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
V IG I+ D +KIR++ R+LLG LH+ +++ +D YML R+ E
Sbjct: 652 SSDVRIGAGIVKQLGDIYRKIRNTSRFLLGNLHDFDPKKDAVAYEDLPELDKYMLHRITE 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ Y +Q+ R + + NF V +LS FY + KDRLY + R S L
Sbjct: 712 VFAEITDAYESYQFYRFFQTVQNFCVVDLSNFYLDIAKDRLYISGLGSFRRRSCQTVLAI 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ H+AE+++ LP G S F
Sbjct: 772 AVENLAKAIAPVLCHMAEDIWQSLPYETGYNSVF 805
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 188/399 (47%), Positives = 246/399 (61%), Gaps = 21/399 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N K FILHDGPPYANGT H+GHA+NKILKDI + LLQG + Y+PGWDCHGLPIELK
Sbjct: 48 NPKEPFILHDGPPYANGTLHMGHALNKILKDIINKYKLLQGHKTDYIPGWDCHGLPIELK 107
Query: 76 AI---TSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ SK++ L+PL +R+KAK FALE Q F+ +G+ DWE N Y T EY
Sbjct: 108 VLQKMKSKERQGLTPLKLRQKAKQFALEAKQEQLEGFKRYGIWGDWE-NPYLTLTPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK---IKLNQV 188
Q+ F + + YIYR LKPV+WSPSSRTALAE+ELEY H S SIY I L
Sbjct: 167 AQIAVFGEMALKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSPSIYAAFPVISLGDK 226
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWT 248
L + +L IWTTTPW++P N +A N LEY+VA G ++IVAK LVE L T
Sbjct: 227 AQELEQYLPNLAVAIWTTTPWTIPGNLAVAVNGDLEYAVAETSGKHIIVAKDLVEQLATT 286
Query: 249 FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDD 307
F+TD+ + G+ L+ ITY HP+ RD K++ G ++++ GTGLVH AP HGQ+D
Sbjct: 287 FETDLTIKTTVLGKVLEGITYHHPLF--DRDSKVVIGGDYITTESGTGLVHTAPGHGQED 344
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL--------HLVEPDVLW 359
++ +P+L+ + + GK++ +AG GL ++ G ++V L E L
Sbjct: 345 YITGQKYGLPILSPVDDSGKFTEEAG-NFAGLQVVAKGNEKVSAGNQAIIDALQEAGTLL 403
Query: 360 T-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y H YPYDWRTKKP I +A++QWF E + AL
Sbjct: 404 KHEEYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDAAL 442
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 12/169 (7%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH--------LVEPDVLWT-ENYQHSYPY 1156
L+ + + GK++ +AG GL ++ +G ++V L E L E Y H YPY
Sbjct: 356 LSPVDDSGKFTEEAG-NFAGLQVVAKGNEKVSAGNQAIIDALQEAGTLLKHEEYAHKYPY 414
Query: 1157 DWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQ 1216
DWRTKKP I +A++QWF E + AL ++ V ++P + + + ++ R WCISRQ
Sbjct: 415 DWRTKKPTIFRATEQWFASVEGFRDAALDAIKSVTWIPAAGENRITPMVSDRSDWCISRQ 474
Query: 1217 RVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
R WGVPIPVFYD +T ++ E I H +I E G D WW L VE+LL
Sbjct: 475 RSWGVPIPVFYDEETNEALLTEETINHVQAIIAEKGSDAWWELSVEELL 523
>gi|427737553|ref|YP_007057097.1| isoleucyl-tRNA synthetase [Rivularia sp. PCC 7116]
gi|427372594|gb|AFY56550.1| Isoleucyl-tRNA synthetase [Rivularia sp. PCC 7116]
Length = 962
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/632 (39%), Positives = 348/632 (55%), Gaps = 56/632 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPA----HLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S SIY + + L E DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSPSIYAAFPMTNLADAAKDKLSEFLPDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYI 527
+A NP L Y+V V+ + +IVA L E L TF + V F G+ L++ TY
Sbjct: 256 VAVNPDLNYAVVEVENLSAVDFKYLIVAADLAERLSETFGAKLTVKATFKGKELENSTYR 315
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+L + GK++
Sbjct: 316 HPLFDRESPV-IIGGDYITTESGTGLVHTAPGHGQEDYIVGQKYNLPILAPVDANGKFTE 374
Query: 588 DAGPGLEGLNILGDGKDQVLH--------LVEPDVLWT-ENYQHSYPYDWRTKKPVILKA 638
+AG + GL ++G KDQ+ L E L E Y H YPYDWRTKKP I +A
Sbjct: 375 EAGKFV-GLKVVG-AKDQISEGNQAIIDALTEAKSLIKHEPYAHKYPYDWRTKKPTIFRA 432
Query: 639 SQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD 698
++QWF E+ + AL ++ V ++P + + +A R WCISRQR WGVPIPVFYD
Sbjct: 433 TEQWFASVEKFRETALEQIKSVQWIPAQGQNRITPMVADRNDWCISRQRSWGVPIPVFYD 492
Query: 699 GDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFD 754
+T +++NE IKH +I E G D WW LSVE L+ N K D +D+WFD
Sbjct: 493 EETNEVVLNEDTIKHVQAIIAEKGSDAWWELSVEDLMPEKYRNDGRKYRKGMDTMDVWFD 552
Query: 755 SGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVD 809
SG SW+ V++ + PA VY+EG DQ GWF SSLLTSVA+ AP++ V HG+ +D
Sbjct: 553 SGSSWASVVEQRPELRYPADVYLEGSDQHRGWFQSSLLTSVAVNGVAPYKTVLTHGYTLD 612
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
EKG K SKS+GNVI + +G K K+ PAYG DVLR W
Sbjct: 613 EKGFKQSKSLGNVIDPRVVIEGGK--------------------NQKQEPAYGADVLRLW 652
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVY 925
V++ V IGKN L D KIR++ R+LLG LH+ + T +++ +D Y
Sbjct: 653 VSS-VDYTNDVGIGKNTLKQIMDIRNKIRNTTRFLLGNLHDFNPETDAVAFEELAEIDKY 711
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
ML R+ E + Y FQ++R + + NF + +LS FY + KDRLY S NG R S
Sbjct: 712 MLHRMTEVFTEITNAYETFQFSRFFQAVQNFCIVDLSNFYLDVGKDRLYISSENGSRRRS 771
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ L + +AP++ H+AE+++ +P
Sbjct: 772 CQTVMQIALENLTKAIAPVLAHMAEDIWQFIP 803
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/400 (44%), Positives = 247/400 (61%), Gaps = 27/400 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R +LQG+++ YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYKILQGRKISYVPGWDCHGLPIELKVLQTM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+S+ + L+PL +R KAK+FA E +N Q+ F+ +GV DWEH Y T + +Y Q+
Sbjct: 113 KSSERQELTPLKLRNKAKDFAWEAVNEQRESFKRYGVWGDWEH-PYLTSNPQYEAEQIAV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP----AHL 192
F +++ + YIYR LKPV+WSPSS+TALAE+ELEY H S SIY + + L
Sbjct: 172 FGDMFLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSPSIYAAFPMTNLADAAKDKL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------VIVAKCLVESLK 246
E DL IWTTTPW++P N +A NP L Y+V V+ + +IVA L E L
Sbjct: 232 SEFLPDLGVAIWTTTPWTIPGNLAVAVNPDLNYAVVEVENLSAVDFKYLIVAADLAERLS 291
Query: 247 WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
TF + V F G+ L++ TY HP+ + + ++ ++++ GTGLVH AP HGQ+
Sbjct: 292 ETFGAKLTVKATFKGKELENSTYRHPLFDRESPV-IIGGDYITTESGTGLVHTAPGHGQE 350
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--------LVEPDVL 358
D+++ +P+L + GK++ +AG + GL ++G KDQ+ L E L
Sbjct: 351 DYIVGQKYNLPILAPVDANGKFTEEAGKFV-GLKVVG-AKDQISEGNQAIIDALTEAKSL 408
Query: 359 WT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y H YPYDWRTKKP I +A++QWF E+ + AL
Sbjct: 409 IKHEPYAHKYPYDWRTKKPTIFRATEQWFASVEKFRETAL 448
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 97/166 (58%), Gaps = 13/166 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH--------LVEPDVLWT-ENYQHSYPYDWR 1159
+ GK++ +AG + GL ++G KDQ+ L E L E Y H YPYDWR
Sbjct: 366 VDANGKFTEEAGKFV-GLKVVG-AKDQISEGNQAIIDALTEAKSLIKHEPYAHKYPYDWR 423
Query: 1160 TKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVW 1219
TKKP I +A++QWF E+ + AL ++ V ++P + + +A R WCISRQR W
Sbjct: 424 TKKPTIFRATEQWFASVEKFRETALEQIKSVQWIPAQGQNRITPMVADRNDWCISRQRSW 483
Query: 1220 GVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
GVPIPVFYD +T +++NE IKH +I E G D WW L VE L+
Sbjct: 484 GVPIPVFYDEETNEVVLNEDTIKHVQAIIAEKGSDAWWELSVEDLM 529
>gi|397638857|gb|EJK73254.1| hypothetical protein THAOC_05131 [Thalassiosira oceanica]
Length = 1055
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/641 (38%), Positives = 367/641 (57%), Gaps = 64/641 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE--GATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY H+SKSIY+ + + L + G+ +L IWTTTPW++PAN +A
Sbjct: 255 TALAEAELEYPEGHVSKSIYVALDVVSPSEELQQHVGSGNLKVAIWTTTPWTIPANLAVA 314
Query: 476 FNPALEYSVASV------KGANVIVAKCLVENLKWTFQ----TDIDVVCDFPGQYLQDIT 525
NP LEY V + ++VAK LVE+L+ F ++ V+ F G L +
Sbjct: 315 INPELEYCVVDAHPNVLDGQSKLLVAKGLVESLETKFDLSDGDNLKVIASFNGSSLVGTS 374
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
Y HP+ + Q + + ++++ GTGLVH AP HGQ+D+L L + +L+ + + G++
Sbjct: 375 YQHPLYERQSPV-IAGGDYITTESGTGLVHTAPGHGQEDYLTGLKNGLELLSPVDDVGRF 433
Query: 586 SPDAGPG------LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILK 637
+ +AG L G ++LG+G V+ +E +L E+Y H YPYDWRTKKP I +
Sbjct: 434 TVEAGSSTIVGDDLVGKSVLGEGNIAVIEALEEAGALLKAEDYGHKYPYDWRTKKPTIFR 493
Query: 638 ASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY 697
A+ QWF E + +AL ++ V ++P+ K + I R WCISRQR WGVPIPVFY
Sbjct: 494 ATDQWFASVEGFRDDALKAVDSVQWIPDVGKNRINSFIESRGDWCISRQRSWGVPIPVFY 553
Query: 698 DGDT----IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-NTSDVNSNV-TKSNDILDI 751
D +T ++++E ++H ++ E G D WW L V LL N ++ TK D +D+
Sbjct: 554 DKETGGTQVLLDEDTLEHIQSIFAEQGSDAWWKLDVVDLLPNKYKSEADKWTKGTDTMDV 613
Query: 752 WFDSGISWSHVLKDK---------PAHVYMEGMDQINGWFMSSLLTSVAL-KHTAPFRNV 801
WFDSG SW+ V++++ PA +Y+EG DQ GWF SSLLTSVA K AP++ V
Sbjct: 614 WFDSGSSWAGVVQERANKEKGLSYPADIYLEGSDQHRGWFQSSLLTSVAANKGQAPYKAV 673
Query: 802 FLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL-PA 860
HGFV+DEKG KMSKS+GNV++ + +G +KL PA
Sbjct: 674 LTHGFVLDEKGFKMSKSLGNVVNPLQVIEGGNN---------------------RKLEPA 712
Query: 861 YGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR 920
YG DVLR WV++ V +G NI+ + + +K+R++ RYL+G L +++ ST +I
Sbjct: 713 YGADVLRLWVSS-VDYAGDVRVGSNIIKQTFESYRKLRNTARYLIGNLDDYNPSTDAIPY 771
Query: 921 ----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
+D +ML L + N +D Y +Q++RA+ +L F +LS FY + KDRLY
Sbjct: 772 DDLPSMDKWMLGTLTKVLNEVDDAYSNYQFSRATNEILRFATADLSNFYLDVAKDRLYIS 831
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+I+ R S LH + ++ API+PH+AE+++ +LP
Sbjct: 832 AIDDFRRRSCQTVLHKLLEGFAKSFAPILPHMAEDIWQNLP 872
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/401 (44%), Positives = 253/401 (63%), Gaps = 26/401 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK---AI 77
F+LHDGPPYANG HIGHA+NK+LKD R +L+GK+VHYVPGWDCHGLPIELK +
Sbjct: 112 FVLHDGPPYANGDLHIGHALNKLLKDFINRHQILKGKQVHYVPGWDCHGLPIELKVLQTM 171
Query: 78 TSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SK++ L+P+ +R++A FA ET+ Q A F+ +GV+ D++ N Y T EY Q+
Sbjct: 172 KSKERQGLTPIALRERAATFAKETVEKQSASFQRYGVIGDFD-NPYLTLLPEYEAAQIRV 230
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE-- 194
F +YKQ +I+R KPV+WSPSSRTALAE+ELEY HVSKSIY+ + + L +
Sbjct: 231 FGEMYKQGFIFRGRKPVHWSPSSRTALAEAELEYPEGHVSKSIYVALDVVSPSEELQQHV 290
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV------KGANVIVAKCLVESLKWT 248
G+ +L IWTTTPW++PAN +A NP LEY V + ++VAK LVESL+
Sbjct: 291 GSGNLKVAIWTTTPWTIPANLAVAINPELEYCVVDAHPNVLDGQSKLLVAKGLVESLETK 350
Query: 249 FQ----TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F +++V+ F G L +Y HP+ + Q + + ++++ GTGLVH AP HG
Sbjct: 351 FDLSDGDNLKVIASFNGSSLVGTSYQHPLYERQSPV-IAGGDYITTESGTGLVHTAPGHG 409
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPG------LEGLNILGDGKDQVLHLVEP--D 356
Q+D+L L + +L+ + + G+++ +AG L G ++LG+G V+ +E
Sbjct: 410 QEDYLTGLKNGLELLSPVDDVGRFTVEAGSSTIVGDDLVGKSVLGEGNIAVIEALEEAGA 469
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E+Y H YPYDWRTKKP I +A+ QWF E + +AL
Sbjct: 470 LLKAEDYGHKYPYDWRTKKPTIFRATDQWFASVEGFRDDAL 510
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 1106 LNLITNQGKYSPDAGPG------LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYD 1157
L+ + + G+++ +AG L G ++LGEG V+ +E +L E+Y H YPYD
Sbjct: 424 LSPVDDVGRFTVEAGSSTIVGDDLVGKSVLGEGNIAVIEALEEAGALLKAEDYGHKYPYD 483
Query: 1158 WRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQR 1217
WRTKKP I +A+ QWF E + +AL ++ V ++P+ K + I R WCISRQR
Sbjct: 484 WRTKKPTIFRATDQWFASVEGFRDDALKAVDSVQWIPDVGKNRINSFIESRGDWCISRQR 543
Query: 1218 VWGVPIPVFYDGDT----IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WGVPIPVFYD +T ++++E ++H ++ E G D WW L V LL
Sbjct: 544 SWGVPIPVFYDKETGGTQVLLDEDTLEHIQSIFAEQGSDAWWKLDVVDLL 593
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 1039 IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
+AK LY +I+ R S LH + ++ API+PH+AE+++ +LP
Sbjct: 823 VAKDRLYISAIDDFRRRSCQTVLHKLLEGFAKSFAPILPHMAEDIWQNLP 872
>gi|440791598|gb|ELR12836.1| isoleucine-tRNA ligase [Acanthamoeba castellanii str. Neff]
Length = 978
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/615 (38%), Positives = 352/615 (57%), Gaps = 44/615 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP--AHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+E+EY H+S S+Y+ + + A L +LHALIWTTTPW++PAN I
Sbjct: 219 TALAEAEVEYSDTHVSPSVYVAFSVKHLANKAGELSRFNNLHALIWTTTPWTIPANMAIC 278
Query: 476 FNPALEYSVASVKG---ANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
NP +EYSV + ++A ++ ++ + +I+V PG L D Y+HP++
Sbjct: 279 VNPNIEYSVVKTTDQHDKHYVIASDRLQAMQELLKQEIEVCARLPGSSLADTIYVHPLDG 338
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+LK+LP V++ GTGLVH APAHG DD+++ A IP+ + + + GK++ D P
Sbjct: 339 --RELKVLPGTHVTTESGTGLVHTAPAHGADDYVVCKAHGIPLRSFVDDNGKFTQDL-PE 395
Query: 593 LEGLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G +LG G + V+ + + ++ Y H YPYDWRTKKP+I++A++QWF+D + +
Sbjct: 396 FAGKFVLGPGNELVIQALTDKGALVHQHKYTHKYPYDWRTKKPIIMRATEQWFVDLKDVV 455
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
AL + V VP + + L I R WCISRQRVWG+PIPVFY +++ E ++
Sbjct: 456 APALDEISRVQMVPATGRTRLESFIRSRQEWCISRQRVWGLPIPVFYSRQGELLLTEESV 515
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSHVLKDK- 766
H L+ +HG D WWS+ +LL S+ ++ K D +D+W DSG+SW VL ++
Sbjct: 516 GHVQKLVAKHGSDCWWSMPTSELLPPSEKHNADKWEKGRDTMDVWLDSGVSWHSVLHNRE 575
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVAL AP+R V HGFV+DE G KMSKS+GN I
Sbjct: 576 LPFPADMYLEGSDQHRGWFQSSLITSVALTGKAPYRAVLTHGFVLDEHGRKMSKSLGNTI 635
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ G EK G GVDVLR WVA+ T+ IG
Sbjct: 636 DPVALVNGD------EKKAG-----------------CGVDVLRMWVASSDYSRDTL-IG 671
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS---RYVDVYMLKRLCEFQNTMDTL 940
++N + ++K+R++ R+LLG L ++ +D YML +L EF + + T
Sbjct: 672 PVVINKMKGSLRKLRNTARFLLGNLADYDRRQAIPDDDLTGIDRYMLHKLHEFSHGVTTD 731
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y ++Q+++ R L+NF +LSAFYF +VKDRLY D+ + R S L + L
Sbjct: 732 YDDYQFSKVYRGLVNFATVDLSAFYFEVVKDRLYADATDSLRRRSTQTVLRHTLDALTAA 791
Query: 1001 VAPIMPHLAEEVYSH 1015
+API P A++++ H
Sbjct: 792 LAPIAPFTAQDIHRH 806
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/400 (46%), Positives = 252/400 (63%), Gaps = 14/400 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY+WQ + K F+LHDGPPYANG H GH +NK+LKDI R LL+G + YVPGWD
Sbjct: 65 LYAWQAQQQRQK-SFVLHDGPPYANGPLHTGHVMNKVLKDIVNRYKLLRGHAIKYVPGWD 123
Query: 67 CHGLPIELKAI--TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
CHGLPIELKA+ LSP +IR KA A E I Q F SWGV+ +W +N Y T
Sbjct: 124 CHGLPIELKAVDQAKSGSTLSPTEIRAKAHACAEEAIAQQMKGFRSWGVMGEW-NNPYAT 182
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D +Y +QL F +LYK+ Y+YR LKPV WSPSSRTALAE+E+EY HVS S+Y+
Sbjct: 183 KDPKYEASQLGLFLDLYKKGYVYRGLKPVIWSPSSRTALAEAEVEYSDTHVSPSVYVAFS 242
Query: 185 LNQVP--AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK---GANVIVAK 239
+ + A L +LHALIWTTTPW++PAN I NP +EYSV + ++A
Sbjct: 243 VKHLANKAGELSRFNNLHALIWTTTPWTIPANMAICVNPNIEYSVVKTTDQHDKHYVIAS 302
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
+++++ + +IEV PG L D Y+HP++ R+LK+LP V++ GTGLVH
Sbjct: 303 DRLQAMQELLKQEIEVCARLPGSSLADTIYVHPLDG--RELKVLPGTHVTTESGTGLVHT 360
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV--EPDV 357
APAHG DD+++ A IP+ + + + GK++ D P G +LG G + V+ + + +
Sbjct: 361 APAHGADDYVVCKAHGIPLRSFVDDNGKFTQDL-PEFAGKFVLGPGNELVIQALTDKGAL 419
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ Y H YPYDWRTKKP+I++A++QWF+D + + AL
Sbjct: 420 VHQHKYTHKYPYDWRTKKPIIMRATEQWFVDLKDVVAPAL 459
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPV 1164
+ + + GK++ D P G +LG G + V+ + + ++ Y H YPYDWRTKKP+
Sbjct: 381 SFVDDNGKFTQDL-PEFAGKFVLGPGNELVIQALTDKGALVHQHKYTHKYPYDWRTKKPI 439
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A++QWF+D + + AL + V VP + + L I R WCISRQRVWG+PIP
Sbjct: 440 IMRATEQWFVDLKDVVAPALDEISRVQMVPATGRTRLESFIRSRQEWCISRQRVWGLPIP 499
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSNQG 1278
VFY +++ E ++ H L+ +HG D WWS+P +LL S+ N K +G
Sbjct: 500 VFYSRQGELLLTEESVGHVQKLVAKHGSDCWWSMPTSELLPPSE-KHNADKWEKG 553
>gi|428779761|ref|YP_007171547.1| isoleucyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
gi|428694040|gb|AFZ50190.1| isoleucyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
Length = 960
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/624 (39%), Positives = 346/624 (55%), Gaps = 47/624 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQV----PAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S SIY + + A L + L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSPSIYAVFPVTALGEDAKASLGDYLFSLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN-----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V G N +IVA LVE L T + + V PG+ L+ Y H
Sbjct: 256 VAVNPDLNYAVVERSGDNNDCRYLIVAADLVEKLSATLEASLTVKTTLPGKALEHCKYRH 315
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ L+ ++++ GTGLVH AP HGQ+D+++ + +P+L+ + QG ++ +
Sbjct: 316 PLFDRESEI-LIGGDYITTESGTGLVHTAPGHGQEDYVVGMRYGLPILSPVDEQGTFTQE 374
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GL +L G D ++ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 375 AGK-FAGLAVLDGGNDAIIEALQTANSLLKQEPYQHKYPYDWRTKKPTIFRATEQWFASV 433
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + AL+ +E+VN++P+ + +R ++QR WCISRQR WGVPIPVFYD +T ++
Sbjct: 434 EGFRDAALSAIEQVNWLPQQGENRIRSMVSQRSDWCISRQRSWGVPIPVFYDEETNEPLL 493
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I H +I E G D WW LS E+LL D K D +D+WFDSG SW+ V
Sbjct: 494 TPETIAHVQNIIAEKGSDAWWELSTEELLPPEYRDNGRTYRKGTDTMDVWFDSGSSWAAV 553
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
K + P +Y+EG DQ GWF SSLLTSVA + AP++ V HGFV+DEKG KMSK
Sbjct: 554 AKQREELNYPVDMYLEGSDQHRGWFQSSLLTSVATQGVAPYKTVLTHGFVLDEKGYKMSK 613
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNV+ I +G K K+ PAYG D+LR W A+
Sbjct: 614 SLGNVVDPAVIIEGGKN--------------------QKQEPAYGADILRLW-ASSVDYS 652
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
VPIG+ IL D +KIR+++R+LLG LH+ + +D YML R E
Sbjct: 653 ADVPIGQGILKQLADAYRKIRNTVRFLLGNLHDFDPKYHGVLDENLPSLDRYMLHRTSEV 712
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + E+++ R + + NF V +LS FY + KDRLY N R S L I
Sbjct: 713 FEEITAAFEEYEFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISDTNSLRRRSCQTVLAII 772
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLP 1017
L R +AP++ H AE+++ ++P
Sbjct: 773 VENLARAIAPVLCHTAEDIWQNIP 796
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/410 (44%), Positives = 250/410 (60%), Gaps = 25/410 (6%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ+E + N K F+LHDGPPYANG+ H+GHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQQEQVYETLSQQNPKEVFVLHDGPPYANGSLHMGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKA---ITSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK I KD+ L+P+ +RKKA FA +TI+TQ+ F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQNIEEKDRANLTPIKLRKKAAKFANKTIDTQRKGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T + Y Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S S
Sbjct: 155 -NPYLTLNPAYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSPS 213
Query: 179 IYLKIKLNQV----PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
IY + + A L + L IWTTTPW++P N +A NP L Y+V G N
Sbjct: 214 IYAVFPVTALGEDAKASLGDYLFSLGVAIWTTTPWTIPGNLAVAVNPDLNYAVVERSGDN 273
Query: 235 -----VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 289
+IVA LVE L T + + V PG+ L+ Y HP+ + ++ L+ +++
Sbjct: 274 NDCRYLIVAADLVEKLSATLEASLTVKTTLPGKALEHCKYRHPLFDRESEI-LIGGDYIT 332
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 349
+ GTGLVH AP HGQ+D+++ + +P+L+ + QG ++ +AG GL +L G D +
Sbjct: 333 TESGTGLVHTAPGHGQEDYVVGMRYGLPILSPVDEQGTFTQEAGK-FAGLAVLDGGNDAI 391
Query: 350 LHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ ++ +L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 IEALQTANSLLKQEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDAAL 441
Score = 146 bits (368), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + QG ++ +AG GL +L G D ++ ++ +L E YQH YPYDWRTKKP
Sbjct: 362 LSPVDEQGTFTQEAGK-FAGLAVLDGGNDAIIEALQTANSLLKQEPYQHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL+ +E VN++P+ + +R ++QR WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDAALSAIEQVNWLPQQGENRIRSMVSQRSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ I H +I E G D WW L E+LL
Sbjct: 481 PVFYDEETNEPLLTPETIAHVQNIIAEKGSDAWWELSTEELL 522
>gi|428775198|ref|YP_007166985.1| isoleucyl-tRNA synthetase [Halothece sp. PCC 7418]
gi|428689477|gb|AFZ42771.1| Isoleucyl-tRNA synthetase [Halothece sp. PCC 7418]
Length = 960
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/625 (40%), Positives = 347/625 (55%), Gaps = 49/625 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQV----PAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S SIY + + A L E A+ L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSPSIYAVFPVTALGEAAQATLGEYASSLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGANV-----IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V G + IVA LVE L T + V PG+ L+ Y H
Sbjct: 256 VAVNPDLTYAVVEQSGEDAQCQYWIVAAELVEKLSATLGQSLTVKTTLPGKALEHCQYRH 315
Query: 529 PINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
P+ R+ K+L G ++++ GTGLVH AP HGQ+D+++ + +P+L+ + QG ++
Sbjct: 316 PLF--DRESKVLIGGDYITTDSGTGLVHTAPGHGQEDYVVGMRYGLPILSPVDEQGTFTE 373
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
+AG GL +L G D V+ ++ +L E YQH YPYDWR+KKP I +A++QWF
Sbjct: 374 EAGQ-FAGLEVLNGGNDAVIEALQAANSLLKQEPYQHKYPYDWRSKKPTIFRATEQWFAS 432
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
E + AL + VN++P+ + +R ++QR WCISRQR WGVPIPVFYD +T +
Sbjct: 433 VEGFREAALMAISGVNWLPKQGENRIRAMVSQRSDWCISRQRSWGVPIPVFYDEETNEPL 492
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSH 761
+ I H +I + G D WW +S E+LL N+ T K D +D+WFDSG SW+
Sbjct: 493 LTPETIAHVQNIIADQGSDAWWEMSTEELLPPEYRNNGRTYRKGTDTMDVWFDSGSSWAA 552
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + P +Y+EG DQ GWF SSLLTSVA + AP++ V HGFV+DEKG KMS
Sbjct: 553 VAKQREELTYPVDMYLEGSDQHRGWFQSSLLTSVATEGVAPYKTVLTHGFVLDEKGYKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GNV+ I G K KK PAYG D+LR W A+
Sbjct: 613 KSMGNVVDPAVIINGGKN--------------------QKKEPAYGADILRLW-ASSVDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
VPIG+ IL D +KIR+++R+LLG LH+ T ++ +D YML R E
Sbjct: 652 SADVPIGQGILKQLADAYRKIRNTVRFLLGNLHDFDPKTDGVAYEQLPSLDQYMLHRTGE 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + EF++ R + + NF V +LS FY + KDRLY N R S L
Sbjct: 712 VFEEITAAFEEFEFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISDANSLRRRSCQTVLAI 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
I L R +AP++ H AE+++ ++P
Sbjct: 772 IVENLARAIAPVLCHTAEDIWQNIP 796
Score = 339 bits (869), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 256/424 (60%), Gaps = 27/424 (6%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ+E + N K F+LHDGPPYANG+ H+GHA+NKILKDI + +LQG +V YV
Sbjct: 35 WQQEQIYETRSQQNPKDVFVLHDGPPYANGSLHMGHALNKILKDIINKYKILQGYKVRYV 94
Query: 63 PGWDCHGLPIELKA---ITSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK I KD+ L+P+ +RKKA FA +TI+ Q+ F+ +GV DW+
Sbjct: 95 PGWDCHGLPIELKVLQNIEEKDRAHLTPIKLRKKAAKFAHKTIDEQREGFKRYGVWGDWD 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T + Y Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S S
Sbjct: 155 -NPYLTLNPAYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSPS 213
Query: 179 IYLKIKLNQV----PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
IY + + A L E A+ L IWTTTPW++P N +A NP L Y+V G +
Sbjct: 214 IYAVFPVTALGEAAQATLGEYASSLGVAIWTTTPWTIPGNLAVAVNPDLTYAVVEQSGED 273
Query: 235 V-----IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FV 288
IVA LVE L T + V PG+ L+ Y HP+ R+ K+L G ++
Sbjct: 274 AQCQYWIVAAELVEKLSATLGQSLTVKTTLPGKALEHCQYRHPLF--DRESKVLIGGDYI 331
Query: 289 SSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ 348
++ GTGLVH AP HGQ+D+++ + +P+L+ + QG ++ +AG GL +L G D
Sbjct: 332 TTDSGTGLVHTAPGHGQEDYVVGMRYGLPILSPVDEQGTFTEEAGQ-FAGLEVLNGGNDA 390
Query: 349 VLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNIL 406
V+ ++ +L E YQH YPYDWR+KKP I +A++QWF E + AL+ + N L
Sbjct: 391 VIEALQAANSLLKQEPYQHKYPYDWRSKKPTIFRATEQWFASVEGFREAALMAISGVNWL 450
Query: 407 GRVG 410
+ G
Sbjct: 451 PKQG 454
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + QG ++ +AG GL +L G D V+ ++ +L E YQH YPYDWR+KKP
Sbjct: 362 LSPVDEQGTFTEEAGQ-FAGLEVLNGGNDAVIEALQAANSLLKQEPYQHKYPYDWRSKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL + GVN++P+ + +R ++QR WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFREAALMAISGVNWLPKQGENRIRAMVSQRSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ I H +I + G D WW + E+LL
Sbjct: 481 PVFYDEETNEPLLTPETIAHVQNIIADQGSDAWWEMSTEELL 522
>gi|428311685|ref|YP_007122662.1| isoleucyl-tRNA synthetase [Microcoleus sp. PCC 7113]
gi|428253297|gb|AFZ19256.1| Isoleucyl-tRNA synthetase [Microcoleus sp. PCC 7113]
Length = 967
Score = 434 bits (1117), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/632 (38%), Positives = 349/632 (55%), Gaps = 37/632 (5%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y ++ Q A + E DL IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSRSLYAAFRMTQPAAGVKEVLEPFLPDLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
+A NP L Y+V V + +IVA LVE L TF T + V PG+ L+ TY HP
Sbjct: 256 VAVNPELNYAVVQVGSESPYKYLIVAADLVERLSETFGTPLTVKATMPGKALEHSTYQHP 315
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
+ Q + ++ +V++ GTGLVH AP HGQ+D+ + +P+L+ + ++G ++ +A
Sbjct: 316 LFDRQSPV-VIGGDYVTTESGTGLVHTAPGHGQEDYQVGQRYGLPILSPVDDKGNFTQEA 374
Query: 590 GPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G GLN+L D + ++ +E +L E Y H YPYDWRTKKP I +A++QWF E
Sbjct: 375 GK-FAGLNVLKDANEAIIQAMEAAGSLLKEEPYLHKYPYDWRTKKPTIFRATEQWFASVE 433
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVN 705
+ EAL + V ++P + + +A+R WCISRQR WGVPIPVFYD T ++N
Sbjct: 434 GFRDEALKAIASVKWIPAQGENRITPMVAERSDWCISRQRSWGVPIPVFYDEATNEPLLN 493
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
E I H +I E G D WW LSVE+LL N + + K D +D+WFDSG SW+ VL
Sbjct: 494 EETIAHVQAIIAEKGSDAWWELSVEELLPENYRNNGKSYRKGTDTMDVWFDSGSSWASVL 553
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ + PA +Y+EG DQ GWF SSLLTSVA AP++ V HGF VDE+G KMSKS
Sbjct: 554 QQREELRYPADLYLEGSDQHRGWFQSSLLTSVATNGCAPYKTVLTHGFTVDEEGRKMSKS 613
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN ++ +G G + + +P YG DVLR WV++
Sbjct: 614 LGNGFDPMEVIEG-----------GTIQLQKKGKKEKVTMPPYGADVLRLWVSS-VDYSA 661
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
+P+ IL D KIR++ R+LLG LH+ ++ +D YML R+ E
Sbjct: 662 DIPLSTTILKQLGDVRGKIRNTARFLLGNLHDFDPEKHTVPYEELPELDRYMLHRMTEVF 721
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ + +Q+ R + + NF V +LS FY + KDRLY S + R S +
Sbjct: 722 QEVTEAFNSYQFFRFFQTIQNFCVVDLSNFYLDIAKDRLYISSPDSSRRRSCQTVMVVAL 781
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L R +AP++ HLAE+++ +LP + S F
Sbjct: 782 ENLARAIAPVLSHLAEDIWQYLPYKTPYKSVF 813
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 248/391 (63%), Gaps = 17/391 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ H+GHA+NKILKDI + LLQG++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHMGHALNKILKDIINKYQLLQGRKVRYVPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + + L+PL +R KA++FAL+ ++ Q+ F+ +GV DWEH Y T EY Q+
Sbjct: 113 KSEERQNLTPLTLRHKARDFALKAVDEQRQGFKRYGVWGDWEH-PYLTLTPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S+Y ++ Q A + E
Sbjct: 172 FGQMVLKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSLYAAFRMTQPAAGVKEVL 231
Query: 197 T----DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVESLKWT 248
DL IWTTTPW+LP N +A NP L Y+V V + +IVA LVE L T
Sbjct: 232 EPFLPDLGVAIWTTTPWTLPGNLAVAVNPELNYAVVQVGSESPYKYLIVAADLVERLSET 291
Query: 249 FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF 308
F T + V PG+ L+ TY HP+ Q + ++ +V++ GTGLVH AP HGQ+D+
Sbjct: 292 FGTPLTVKATMPGKALEHSTYQHPLFDRQSPV-VIGGDYVTTESGTGLVHTAPGHGQEDY 350
Query: 309 LLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHS 366
+ +P+L+ + ++G ++ +AG GLN+L D + ++ +E +L E Y H
Sbjct: 351 QVGQRYGLPILSPVDDKGNFTQEAGK-FAGLNVLKDANEAIIQAMEAAGSLLKEEPYLHK 409
Query: 367 YPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 410 YPYDWRTKKPTIFRATEQWFASVEGFRDEAL 440
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + ++ +E +L E Y H YPYDWRTKKP
Sbjct: 361 LSPVDDKGNFTQEAGK-FAGLNVLKDANEAIIQAMEAAGSLLKEEPYLHKYPYDWRTKKP 419
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EAL + V ++P + + +A+R WCISRQR WGVPI
Sbjct: 420 TIFRATEQWFASVEGFRDEALKAIASVKWIPAQGENRITPMVAERSDWCISRQRSWGVPI 479
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD T ++NE I H +I E G D WW L VE+LL
Sbjct: 480 PVFYDEATNEPLLNEETIAHVQAIIAEKGSDAWWELSVEELL 521
>gi|428320457|ref|YP_007118339.1| Isoleucyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
gi|428244137|gb|AFZ09923.1| Isoleucyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
Length = 1196
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/626 (38%), Positives = 348/626 (55%), Gaps = 59/626 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ + ++ L L A IWTTTPW++PAN
Sbjct: 195 TALAEAELEYPEGHTSRSIYVGFHVKKLSKSLQTKLKRYMPSLWAAIWTTTPWTIPANLA 254
Query: 474 IAFNPALEYSVAS------VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYI 527
IA NP L Y+V + ++VA V+ L TF T++ ++ F G+ L+ Y
Sbjct: 255 IAVNPELTYAVVEPPANSHIAQQFMLVAVDAVDRLSATFNTELKILATFKGKELEGCIYK 314
Query: 528 HPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
HP+ R+ ++ G ++++ GTGLVH AP HGQ+DF++ +PVL + G ++
Sbjct: 315 HPLF--DRESPIVAGGDYITADSGTGLVHTAPGHGQEDFIVGKRCGLPVLTPVDENGNFT 372
Query: 587 PDAGPGLEGLNILGDGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFI 644
+AG GLN+LG+G V+ L E + L E +Y HSYPYDWRTKKP I +A++QWF
Sbjct: 373 AEAGQ-FAGLNVLGNGNAAVIDALAEANCLIKEESYAHSYPYDWRTKKPTIFRATEQWFA 431
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--I 702
E + EAL + +VN++P + + + R WCISRQR WGVPIPVFYD +T
Sbjct: 432 SVEGFRDEALKAIADVNWIPAQGENRITAMVGDRSDWCISRQRTWGVPIPVFYDEETNEP 491
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWS 760
++NE I H + E G D WW LS+++LL S N+ T K D +D+WFDSG SW+
Sbjct: 492 LLNEETIAHVQGIFAERGSDAWWELSIDELLPESYRNNGRTYRKGTDTMDVWFDSGSSWA 551
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V K + PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG KM
Sbjct: 552 AVAKGRSELNYPADIYLEGSDQHRGWFQSSLLTSVATNGVAPYKTVLTHGFVLDEKGRKM 611
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS GNV+ A + YG DVLR WV++
Sbjct: 612 SKSEGNVVDP-----------------------------AVVIKEYGADVLRLWVSS-VD 641
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
VP+GKNIL D +KIR++ ++LLG LH+ + +++ +D YML R+
Sbjct: 642 YSADVPLGKNILKQQSDVYRKIRNTAKFLLGNLHDFDPAKDAVACEELPELDRYMLHRMG 701
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
E + + FQ++R + + NF +LS FY + KDRLY + + R S +
Sbjct: 702 EVFAEVQDAFESFQFSRFFQTVQNFCTVDLSNFYLDIAKDRLYISATDTRRRRSCQTVIA 761
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L R +AP++ H+AE+++ +LP
Sbjct: 762 IAVENLARAIAPVLCHMAEDIWQYLP 787
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/394 (45%), Positives = 247/394 (62%), Gaps = 21/394 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
F+LHDGPPYANG HIGHA+NKILKD R +L+GK+V YVPGWDCHGLPIELK +
Sbjct: 52 FVLHDGPPYANGQLHIGHALNKILKDFINRYQILRGKKVRYVPGWDCHGLPIELKVLQNM 111
Query: 78 TSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
S D+L L+P+++R+KA FA +T+ Q+ F+ +GV DW+H Y T EY Q+
Sbjct: 112 KSDDRLNLTPIELRRKASAFAQQTMEQQRESFQRYGVWGDWKHP-YLTLKPEYEAAQIGV 170
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG- 195
F + + YIYR KPV+WSPSS+TALAE+ELEY H S+SIY+ + ++ L
Sbjct: 171 FGQMVLKGYIYRGFKPVHWSPSSKTALAEAELEYPEGHTSRSIYVGFHVKKLSKSLQTKL 230
Query: 196 ---ATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS------VKGANVIVAKCLVESLK 246
L A IWTTTPW++PAN IA NP L Y+V + ++VA V+ L
Sbjct: 231 KRYMPSLWAAIWTTTPWTIPANLAIAVNPELTYAVVEPPANSHIAQQFMLVAVDAVDRLS 290
Query: 247 WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQ 305
TF T+++++ F G+ L+ Y HP+ R+ ++ G ++++ GTGLVH AP HGQ
Sbjct: 291 ATFNTELKILATFKGKELEGCIYKHPLF--DRESPIVAGGDYITADSGTGLVHTAPGHGQ 348
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-ENY 363
+DF++ +PVL + G ++ +AG GLN+LG+G V+ L E + L E+Y
Sbjct: 349 EDFIVGKRCGLPVLTPVDENGNFTAEAGQ-FAGLNVLGNGNAAVIDALAEANCLIKEESY 407
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYPYDWRTKKP I +A++QWF E + EAL
Sbjct: 408 AHSYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 441
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 100/172 (58%), Gaps = 5/172 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKP 1163
L + G ++ +AG GLN+LG G V+ L E + L E +Y HSYPYDWRTKKP
Sbjct: 362 LTPVDENGNFTAEAGQ-FAGLNVLGNGNAAVIDALAEANCLIKEESYAHSYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EAL + VN++P + + + R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDEALKAIADVNWIPAQGENRITAMVGDRSDWCISRQRTWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
PVFYD +T ++NE I H + E G D WW L +++LL S N+ T
Sbjct: 481 PVFYDEETNEPLLNEETIAHVQGIFAERGSDAWWELSIDELLPESYRNNGRT 532
>gi|434390951|ref|YP_007125898.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
gi|428262792|gb|AFZ28738.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
Length = 1093
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/622 (39%), Positives = 342/622 (54%), Gaps = 45/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIK---LNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H S+S+Y L++ + L E L IWTTTPW++PAN +
Sbjct: 196 TALAEAELEYPEGHTSRSLYAAFPVTHLSETASALGEFLPHLSVAIWTTTPWTIPANLAV 255
Query: 475 AFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
A NP L Y+V V +IVA LVE L +D+ + G+ L+ TY HP+
Sbjct: 256 AVNPELTYAVVQVANHEQPKYLIVAADLVERLSQILASDLAIKAKVSGKDLEHTTYRHPL 315
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+ + ++ +V++ GTGLVH AP HGQDD+++ +P+L + G ++ +AG
Sbjct: 316 YDRESPV-VIGGDYVTTESGTGLVHTAPGHGQDDYIVGQRYGLPILAPVDADGNFTAEAG 374
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
GLN+LGDG V+ + +L E Y H YPYDWRTKKP I +A++QWF E
Sbjct: 375 -QFAGLNVLGDGNAAVIDALSAAGALLKEEPYVHKYPYDWRTKKPTIFRATEQWFASVEG 433
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNE 706
+ AL + EV ++P + + +++R WCISRQR WGVPIPVFYD +T ++NE
Sbjct: 434 FRDAALKAISEVKWIPAIGENRITAMVSERSDWCISRQRSWGVPIPVFYDEETGEALLNE 493
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSHVLK 764
I H +I E G D WW LS E+LL S N+ + K D +D+WFDSG SW+ V +
Sbjct: 494 ETIAHVQGIIAEIGTDAWWELSTEELLPESYRNNGRSYRKGTDTMDVWFDSGSSWAAVAQ 553
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE+G KMSKS+
Sbjct: 554 QRPELHYPAEMYLEGSDQHRGWFQSSLLTSVAVNGYAPYKTVLTHGFTIDEQGRKMSKSL 613
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I + G K K+ PAYG DVLR WV++
Sbjct: 614 GNGIEPEIVINGGKN--------------------QKEEPAYGADVLRLWVSS-VDYTSD 652
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
P+ KNIL + +KIR++ R+LLG LH+ S S+ +D YML R+ E
Sbjct: 653 APLSKNILKQLSEAYRKIRNTARFLLGNLHDFDPSEHSVPYAQLPELDRYMLHRMTEVFK 712
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ + +Q+ R + + NF V +LS FY KDRLY + + R S L
Sbjct: 713 DVTEAFETYQFFRFFQTVQNFCVVDLSNFYLDTAKDRLYISAPDAFRRRSCQTVLSVALE 772
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
L R +AP++ H+AE+++ LP
Sbjct: 773 NLARAIAPVLCHMAEDIWQQLP 794
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/390 (44%), Positives = 239/390 (61%), Gaps = 16/390 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
F+LHDGPPYANG H+GHA+NKILKDI R LLQG++V YVPGWDCHGLPIELK +
Sbjct: 53 FVLHDGPPYANGALHLGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++ + L+PL++R+KAK FAL + Q F+ +GV D++ N Y T EY Q+
Sbjct: 113 KAAERQNLTPLELRRKAKEFALAAVEEQSKSFQRYGVWGDFD-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK---LNQVPAHLL 193
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S+Y L++ + L
Sbjct: 172 FGQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSLYAAFPVTHLSETASALG 231
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVESLKWTF 249
E L IWTTTPW++PAN +A NP L Y+V V +IVA LVE L
Sbjct: 232 EFLPHLSVAIWTTTPWTIPANLAVAVNPELTYAVVQVANHEQPKYLIVAADLVERLSQIL 291
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
+D+ + G+ L+ TY HP+ + + ++ +V++ GTGLVH AP HGQDD++
Sbjct: 292 ASDLAIKAKVSGKDLEHTTYRHPLYDRESPV-VIGGDYVTTESGTGLVHTAPGHGQDDYI 350
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSY 367
+ +P+L + G ++ +AG GLN+LGDG V+ + +L E Y H Y
Sbjct: 351 VGQRYGLPILAPVDADGNFTAEAG-QFAGLNVLGDGNAAVIDALSAAGALLKEEPYVHKY 409
Query: 368 PYDWRTKKPVILKASQQWFIDTERIKPEAL 397
PYDWRTKKP I +A++QWF E + AL
Sbjct: 410 PYDWRTKKPTIFRATEQWFASVEGFRDAAL 439
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 1113 GKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQ 1170
G ++ +AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I +A++
Sbjct: 367 GNFTAEAG-QFAGLNVLGDGNAAVIDALSAAGALLKEEPYVHKYPYDWRTKKPTIFRATE 425
Query: 1171 QWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 1230
QWF E + AL + V ++P + + +++R WCISRQR WGVPIPVFYD +
Sbjct: 426 QWFASVEGFRDAALKAISEVKWIPAIGENRITAMVSERSDWCISRQRSWGVPIPVFYDEE 485
Query: 1231 T--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSN 1271
T ++NE I H +I E G D WW L E+LL S N+
Sbjct: 486 TGEALLNEETIAHVQGIIAEIGTDAWWELSTEELLPESYRNNG 528
>gi|427731408|ref|YP_007077645.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7524]
gi|427367327|gb|AFY50048.1| Isoleucyl-tRNA synthetase [Nostoc sp. PCC 7524]
Length = 1097
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/637 (39%), Positives = 351/637 (55%), Gaps = 51/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN----QVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY + V + L E DL +WTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFPVTGLAEAVKSVLGEYLPDLGVAVWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASV--KGAN-------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDI 524
+A N L YS+ V KGA +IVA LVE L T ++ V F GQ L+
Sbjct: 256 VAVNGDLNYSLVEVSRKGAETQSKFKYLIVAAELVERLATTISAELTVKATFKGQDLEHT 315
Query: 525 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
TY HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ L +P+L + + G
Sbjct: 316 TYRHPLFDRESPV-VVGGDYITTESGTGLVHTAPGHGQEDYIVGLRYGLPILAPVDDNGN 374
Query: 585 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG GLN+LGDG V+ + +L E Y H YPYDWRTKKP I +A++QW
Sbjct: 375 FTEEAGQ-FAGLNVLGDGNQAVIDALTDAGSLLKEEAYAHKYPYDWRTKKPTIFRATEQW 433
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F + EAL + V ++P + + IA+R WCISRQR WGVPIPVFYD +T
Sbjct: 434 FASVAGFREEALKAIASVKWIPAQGENRITPMIAERSDWCISRQRSWGVPIPVFYDEETG 493
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGIS 758
++NE I H +I E G D WW LSVE+LL S N+ + + D +D+WFDSG S
Sbjct: 494 EPLLNEETINHVQAIIAEKGSDAWWELSVEELLPESYRNNGRSYRRGTDTMDVWFDSGSS 553
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V+K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE+G
Sbjct: 554 WASVVKQRPELRYPADMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEQGR 613
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKSVGNV+ + G K KK P YG DVLR WV++
Sbjct: 614 KMSKSVGNVVDPQVMILGGKD--------------------QKKEPPYGADVLRLWVSS- 652
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
V +G NI+ D KIR++ R+LLG LH+ ++ +D YML R
Sbjct: 653 VDYTADVRLGSNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKDAVPFEELPQLDKYMLHR 712
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E + + FQ+ R + + NF V +LS FY + KDRLY + N R S
Sbjct: 713 IREVFQEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYISAPNSFRRRSCQTV 772
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+H L R +AP++ H AE+++ +LP + S F
Sbjct: 773 IHIALENLARAIAPVLCHTAEDIWQYLPYKTPYKSVF 809
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/396 (46%), Positives = 248/396 (62%), Gaps = 22/396 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R LLQG++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNL 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ + L+PL +R+KAK FAL T++ Q+ F+ +GV DW+ N Y T EY Q+
Sbjct: 113 KSAERQNLTPLQLRQKAKEFALATVDDQRKSFKRYGVWGDWD-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN----QVPAHL 192
F +Y + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY + V + L
Sbjct: 172 FGQMYLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTGLAEAVKSVL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--KGAN-------VIVAKCLVE 243
E DL +WTTTPW++P N +A N L YS+ V KGA +IVA LVE
Sbjct: 232 GEYLPDLGVAVWTTTPWTIPGNLAVAVNGDLNYSLVEVSRKGAETQSKFKYLIVAAELVE 291
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L T ++ V F GQ L+ TY HP+ + + ++ ++++ GTGLVH AP H
Sbjct: 292 RLATTISAELTVKATFKGQDLEHTTYRHPLFDRESPV-VVGGDYITTESGTGLVHTAPGH 350
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTE 361
GQ+D+++ L +P+L + + G ++ +AG GLN+LGDG V+ + +L E
Sbjct: 351 GQEDYIVGLRYGLPILAPVDDNGNFTEEAGQ-FAGLNVLGDGNQAVIDALTDAGSLLKEE 409
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YPYDWRTKKP I +A++QWF + EAL
Sbjct: 410 AYAHKYPYDWRTKKPTIFRATEQWFASVAGFREEAL 445
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 98/166 (59%), Gaps = 5/166 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I
Sbjct: 369 VDDNGNFTEEAGQ-FAGLNVLGDGNQAVIDALTDAGSLLKEEAYAHKYPYDWRTKKPTIF 427
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + EAL + V ++P + + IA+R WCISRQR WGVPIPVF
Sbjct: 428 RATEQWFASVAGFREEALKAIASVKWIPAQGENRITPMIAERSDWCISRQRSWGVPIPVF 487
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
YD +T ++NE I H +I E G D WW L VE+LL S N+
Sbjct: 488 YDEETGEPLLNEETINHVQAIIAEKGSDAWWELSVEELLPESYRNN 533
>gi|434388785|ref|YP_007099396.1| isoleucyl-tRNA synthetase [Chamaesiphon minutus PCC 6605]
gi|428019775|gb|AFY95869.1| isoleucyl-tRNA synthetase [Chamaesiphon minutus PCC 6605]
Length = 1143
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/628 (38%), Positives = 348/628 (55%), Gaps = 50/628 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP----AHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+S+SI+ K+ QV A L DL IWTTTPW++PAN
Sbjct: 196 TALAEAELEYPEGHVSRSIFAAFKVTQVADAAKAILEPFQEDLAVAIWTTTPWTIPANLA 255
Query: 474 IAFNPALEYSVASVKGAN---------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDI 524
+A NP L Y++ V IVA +VE L F + + G L+
Sbjct: 256 VAVNPDLNYAIVEVAAPEDNKYDGCKYAIVAADMVEGLAAKFNLHLTTKAEIKGADLEHT 315
Query: 525 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
TY HP+ + ++ ++++ GTGLVH AP HGQ+D+++ + +L + G
Sbjct: 316 TYKHPLYDRHSPV-IIGGDYITTESGTGLVHTAPGHGQEDYIVGQKYGLSILAPVDGDGN 374
Query: 585 YSPDAGPGLEGLNILGDGKDQVLH-LVEP-DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG L+G N+LGDG + V+ L+E ++ E+Y H YPYDWRTKKP I +A++QW
Sbjct: 375 FTDEAGELLKGANVLGDGNELVIQALIEARSLIKEESYAHKYPYDWRTKKPTIFRATEQW 434
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F + K AL + EV ++P + + +A+R WCISRQR WGVPIPVFYD +T
Sbjct: 435 FASVKGFKEAALKAISEVEWIPAQGENRITPMVAERSDWCISRQRNWGVPIPVFYDAETN 494
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGIS 758
++ EA+I H + EHG D W+S+SVE+LL S ++ T K D +D+WFDSG S
Sbjct: 495 EPLLTEASINHVQNIFREHGSDAWYSMSVEELLPESHRHNGRTYIKGTDTMDVWFDSGSS 554
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V + P +Y+EG DQ GWF SSLLTSVA APF+ V HGFV+DEKG
Sbjct: 555 WAAVANQRDNLIYPVDMYLEGSDQHRGWFQSSLLTSVANNGIAPFKTVLTHGFVLDEKGE 614
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GN+I + G K +K PAYG D++R WV++
Sbjct: 615 KMSKSLGNIIDPMVVMDGGKN--------------------QQKDPAYGADLVRLWVSS- 653
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
V IG NIL D +KIR++ R+LLG +H+ + ++ +D YML R
Sbjct: 654 VDYATEVRIGPNILKQLSDASRKIRNTARFLLGNIHDFDPAKDAVPYAELAELDRYMLHR 713
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ + + +Q+ + +++ NF + +LS FY + KDRLY + R S
Sbjct: 714 MSVVLAEITEAFDRYQFFKFFQLVQNFCIVDLSNFYLDIAKDRLYISAPTSFRRRSCQTV 773
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L I L R +AP++ H+AE+++ +LP
Sbjct: 774 LAIILENLTRAIAPVLCHMAEDIWQYLP 801
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/396 (44%), Positives = 241/396 (60%), Gaps = 21/396 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F+LHDGPPYANG+ H+GHA+NK LKDI R LL+G++V YVPGWDCHGLPIELK I
Sbjct: 53 FVLHDGPPYANGSLHMGHALNKTLKDIINRYQLLKGRKVRYVPGWDCHGLPIELKVIQDM 112
Query: 80 --KDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++L L+PL++R+KA FAL+T+ QK F+ GV +W+ Y T EY Q+
Sbjct: 113 KPAERLSLTPLELRQKAAAFALKTVEEQKIGFKRLGVWGEWD-KPYLTLQPEYEAAQVGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP----AHL 192
F + + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SI+ K+ QV A L
Sbjct: 172 FGKMVLEGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSIFAAFKVTQVADAAKAIL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---------VIVAKCLVE 243
DL IWTTTPW++PAN +A NP L Y++ V IVA +VE
Sbjct: 232 EPFQEDLAVAIWTTTPWTIPANLAVAVNPDLNYAIVEVAAPEDNKYDGCKYAIVAADMVE 291
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L F + + G L+ TY HP+ + ++ ++++ GTGLVH AP H
Sbjct: 292 GLAAKFNLHLTTKAEIKGADLEHTTYKHPLYDRHSPV-IIGGDYITTESGTGLVHTAPGH 350
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEP-DVLWTE 361
GQ+D+++ + +L + G ++ +AG L+G N+LGDG + V+ L+E ++ E
Sbjct: 351 GQEDYIVGQKYGLSILAPVDGDGNFTDEAGELLKGANVLGDGNELVIQALIEARSLIKEE 410
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y H YPYDWRTKKP I +A++QWF + K AL
Sbjct: 411 SYAHKYPYDWRTKKPTIFRATEQWFASVKGFKEAAL 446
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 102/162 (62%), Gaps = 4/162 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEP-DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ +AG L+G N+LG+G + V+ L+E ++ E+Y H YPYDWRTKKP I
Sbjct: 369 VDGDGNFTDEAGELLKGANVLGDGNELVIQALIEARSLIKEESYAHKYPYDWRTKKPTIF 428
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + K AL + V ++P + + +A+R WCISRQR WGVPIPVF
Sbjct: 429 RATEQWFASVKGFKEAALKAISEVEWIPAQGENRITPMVAERSDWCISRQRNWGVPIPVF 488
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
YD +T ++ EA+I H + EHG D W+S+ VE+LL S
Sbjct: 489 YDAETNEPLLTEASINHVQNIFREHGSDAWYSMSVEELLPES 530
>gi|126658904|ref|ZP_01730047.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
gi|126619854|gb|EAZ90580.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
Length = 959
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/633 (38%), Positives = 352/633 (55%), Gaps = 47/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SI+ I ++ A +LE +L IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSRSIFAAFPIINASKDAAEILEPFLNNLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVAS-----VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V K +IVA LVE L TF+T++ V PG+ L+ Y H
Sbjct: 256 VALNPDLNYAVVEQTSDVCKYQYLIVAVDLVEKLSTTFETELTVKATIPGKALEHTIYRH 315
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ L+ +V++ GTGLVH AP HGQ+D+++ + VL+ + +G ++ +
Sbjct: 316 PLYDRESEI-LIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLGVLSPVDAKGNFTEE 374
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GLN+L + + +++ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 375 AGQ-FAGLNVLKNANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKPTIFRATEQWFASV 433
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
+ + AL ++ V ++P + + ++ R WCISRQR WGVPIPVFY+ +T ++
Sbjct: 434 KGFREAALTAIKTVQWIPAQGENRITSMVSDRSDWCISRQRNWGVPIPVFYNNETNEPLL 493
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
E IKH T+ E G D WW +S+E+LL + N K D +D+WFDSG SW+ V
Sbjct: 494 TEETIKHIQTIFAEKGSDAWWEMSIEELLPEKYKTDSHNYRKGTDTMDVWFDSGSSWASV 553
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF++DEKG KMSK
Sbjct: 554 AKQRPELKYPADIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFILDEKGYKMSK 613
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GN + + + G K K+ P YG DVLR WV++
Sbjct: 614 SLGNTVDPNVVINGGK--------------------NQKQEPPYGADVLRLWVSS-VDYS 652
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
VP+GK IL D +KIR++ R+LLG LH+ ++S +D YML R+ E
Sbjct: 653 SDVPLGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKRDAVSYEELPELDRYMLHRITEV 712
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + +Q+ R + + NF V +LS FY + KDRLY + R S L
Sbjct: 713 FTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISHPDSMRRRSCQTVLAVA 772
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ H+AE+++ LP S F
Sbjct: 773 IENLAKAIAPVLCHMAEDIWQFLPYETSEKSVF 805
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 249/398 (62%), Gaps = 19/398 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG+ H+GHA+NK LKDI + LL+G +V YVPGWDCHGLPIELK + S
Sbjct: 53 FILHDGPPYANGSLHMGHALNKTLKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQSM 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+PL +R KA++FAL+T Q F+ +GV DWE N Y T EY Q+
Sbjct: 113 KSKEREGLTPLKLRHKARDFALKTQEEQAKGFKRFGVWGDWE-NPYLTLTPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK---IKLNQVPAHLL 193
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SI+ I ++ A +L
Sbjct: 172 FGEMVLKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIFAAFPIINASKDAAEIL 231
Query: 194 EG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS-----VKGANVIVAKCLVESLKW 247
E +L IWTTTPW+LP N +A NP L Y+V K +IVA LVE L
Sbjct: 232 EPFLNNLGVAIWTTTPWTLPGNLAVALNPDLNYAVVEQTSDVCKYQYLIVAVDLVEKLST 291
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
TF+T++ V PG+ L+ Y HP+ + ++ L+ +V++ GTGLVH AP HGQ+D
Sbjct: 292 TFETELTVKATIPGKALEHTIYRHPLYDRESEI-LIGGDYVTTESGTGLVHTAPGHGQED 350
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQH 365
+++ + VL+ + +G ++ +AG GLN+L + + +++ ++ +L E YQH
Sbjct: 351 YMVGQRYGLGVLSPVDAKGNFTEEAGQ-FAGLNVLKNANEVIINELKEKGSLLKEEAYQH 409
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEALVC-KTV 402
YPYDWRTKKP I +A++QWF + + AL KTV
Sbjct: 410 KYPYDWRTKKPTIFRATEQWFASVKGFREAALTAIKTV 447
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + +G ++ +AG GLN+L + +++ ++ +L E YQH YPYDWRTKKP
Sbjct: 362 LSPVDAKGNFTEEAGQ-FAGLNVLKNANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF + + AL ++ V ++P + + ++ R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVKGFREAALTAIKTVQWIPAQGENRITSMVSDRSDWCISRQRNWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY+ +T ++ E IKH T+ E G D WW + +E+LL
Sbjct: 481 PVFYNNETNEPLLTEETIKHIQTIFAEKGSDAWWEMSIEELL 522
>gi|218441945|ref|YP_002380274.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
gi|254782386|sp|B7KFT1.1|SYI_CYAP7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|218174673|gb|ACK73406.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
Length = 959
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/633 (39%), Positives = 349/633 (55%), Gaps = 47/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y + + + T DL IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSRSVYAVFPITKASDTAKKVLTPYLKDLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVAS-----VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V K IVA LV+ L TF+T + V G+ L+ TY H
Sbjct: 256 VALNPDLTYAVVESGKPVCKHQYFIVAADLVDKLSATFETPLTVKATLKGEDLEHTTYRH 315
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ L+ +V++ GTGLVH AP HGQ+D+++ +PVL+ + +G ++ +
Sbjct: 316 PLFDRESEI-LIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPVLSPVDEKGNFTSE 374
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GLN+L D + ++ +E +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 375 AG-QFAGLNVLKDANEAIIKELEEKGALLKEEPYQHKYPYDWRTKKPTIFRATEQWFASV 433
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + AL ++ V ++P + + +A R WCISRQR WGVPIPVFYD +T ++
Sbjct: 434 EGFRDTALEAIKNVTWIPPQGENRITPMVADRSDWCISRQRSWGVPIPVFYDEETNEPLL 493
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSHV 762
NE I H + E G D WW LSVE+LL N+ K D +D+WFDSG SW+ V
Sbjct: 494 NEETINHVQAIFAEKGSDAWWELSVEELLPQPYRNNGRKYRKGMDTMDVWFDSGSSWAAV 553
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
K + P +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSK
Sbjct: 554 AKQRPELSYPVDIYLEGSDQHRGWFQSSLLTSVATNGIAPYKMVLTHGFVLDEQGRKMSK 613
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GN++ + I G K KK PAYG DVLR WV++
Sbjct: 614 SIGNIVDPNMIINGGKD--------------------QKKEPAYGADVLRLWVSS-VDYS 652
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
VPIG+NIL D KIR++ R+LLG LH+ +++ +D YML R+ E
Sbjct: 653 SDVPIGQNILKQLVDVRNKIRNTARFLLGNLHDFDPEKDTVAYEDLPELDRYMLHRITEV 712
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + FQ+ R +V+ NF V +LS FY + KDRLY N R S L
Sbjct: 713 FTEVTEAFETFQFFRFFQVVQNFCVVDLSNFYLDIAKDRLYISDPNNLRRRSCQTVLKVA 772
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L +++AP++ HLAE+++ LP + S F
Sbjct: 773 LENLAKSIAPVLCHLAEDIWQFLPYKTPYKSVF 805
Score = 326 bits (835), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 174/392 (44%), Positives = 238/392 (60%), Gaps = 18/392 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG+ H+GHA+NK LKDI + L +G + YVPGWDCHGLPIELK + S
Sbjct: 53 FILHDGPPYANGSLHMGHALNKTLKDIINKYKLQRGYKARYVPGWDCHGLPIELKVLQSM 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+PL +R KA++FAL T Q F+ +GV DWEH Y T +Y Q+
Sbjct: 113 KQKEREDLTPLKLRHKARDFALSTQKEQSESFQRFGVWGDWEH-PYLTLTPDYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S+Y + + +
Sbjct: 172 FGQMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSVYAVFPITKASDTAKKVL 231
Query: 197 T----DLHALIWTTTPWSLPANQFIAFNPALEYSVAS-----VKGANVIVAKCLVESLKW 247
T DL IWTTTPW+LP N +A NP L Y+V K IVA LV+ L
Sbjct: 232 TPYLKDLGVAIWTTTPWTLPGNLAVALNPDLTYAVVESGKPVCKHQYFIVAADLVDKLSA 291
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
TF+T + V G+ L+ TY HP+ + ++ L+ +V++ GTGLVH AP HGQ+D
Sbjct: 292 TFETPLTVKATLKGEDLEHTTYRHPLFDRESEI-LIGGDYVTTESGTGLVHTAPGHGQED 350
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQH 365
+++ +PVL+ + +G ++ +AG GLN+L D + ++ +E +L E YQH
Sbjct: 351 YIVGQRYGLPVLSPVDEKGNFTSEAG-QFAGLNVLKDANEAIIKELEEKGALLKEEPYQH 409
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YPYDWRTKKP I +A++QWF E + AL
Sbjct: 410 KYPYDWRTKKPTIFRATEQWFASVEGFRDTAL 441
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + +G ++ +AG GLN+L + + ++ +E +L E YQH YPYDWRTKKP
Sbjct: 362 LSPVDEKGNFTSEAG-QFAGLNVLKDANEAIIKELEEKGALLKEEPYQHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + + +A R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDTALEAIKNVTWIPPQGENRITPMVADRSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++NE I H + E G D WW L VE+LL
Sbjct: 481 PVFYDEETNEPLLNEETINHVQAIFAEKGSDAWWELSVEELL 522
>gi|168008836|ref|XP_001757112.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691610|gb|EDQ77971.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1002
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/629 (38%), Positives = 350/629 (55%), Gaps = 52/629 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEY H SKSIY+ K+ + P L + IWTTTPW++PAN
Sbjct: 207 GTALAEAELEYPEGHTSKSIYVVFKMIELSDNFPESLKPLLPSMGVAIWTTTPWTIPANA 266
Query: 473 FIAFNPALEYSVASVKGA--------NVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDI 524
+A N L Y+V +KG+ +VIVA LV L+ + ++V FPG L+
Sbjct: 267 AVAVNDKLTYAVVEIKGSALLDPQVKHVIVAADLVPALEAKWGVSLEVKGTFPGSALEHS 326
Query: 525 TYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 583
Y HP+ E+R+ ++ G ++++ GTGLVH AP HGQ+D++ L +P+L+ + + G
Sbjct: 327 RYRHPL--EERENPVVVGGDYITTESGTGLVHTAPGHGQEDYITGLKYGLPLLSPVDDNG 384
Query: 584 KYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQ 641
++ +AG GLN+LG+G V+ ++ +L E Y H YPYDWRTKKP I +A++Q
Sbjct: 385 NFTSEAGQ-FSGLNVLGEGNSSVVTALDSHSVLLMEEAYVHKYPYDWRTKKPTIFRATEQ 443
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DG 699
WF E + AL + V +VP + +K + R WCISRQR WGVPIPVFY +
Sbjct: 444 WFASVEGFRQTALEAIRSVQWVPATGEKRITSMTVSRSDWCISRQRSWGVPIPVFYHVES 503
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS-DVNSNVTKSN-DILDIWFDSGI 757
+ ++ + I H +I + G D WW +SVE LL +N+ K D +D+WFDSG
Sbjct: 504 NEPLMTQETIAHIQAIIAQKGSDAWWYMSVEDLLPAEYRGQANMYKKGMDTMDVWFDSGS 563
Query: 758 SWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKG 812
SW+ V+ + PA +Y+EG DQ GWF SSLLTSVA + AP++ V HGFV+DE+G
Sbjct: 564 SWAAVVAARKELRSPADLYLEGSDQHRGWFQSSLLTSVATEGRAPYKTVLTHGFVLDERG 623
Query: 813 AKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA 872
KMSKS+GNV+ + +G K K P YG DVLR WV++
Sbjct: 624 HKMSKSLGNVVDPRSVIEGGKN--------------------QKAEPGYGADVLRLWVSS 663
Query: 873 HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLK 928
V IG I+ + +K+R +LRYLL LH+ S++ +D Y L
Sbjct: 664 -VDYTGDVMIGPQIVRQMSEIYRKLRGTLRYLLSNLHDWKPEEHSVAYEDLPKLDQYALF 722
Query: 929 RLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLH 988
+L + ++ Y ++Q+ R +++ F+V +LS FYF KDRLY R S
Sbjct: 723 QLASVVDGIEDSYNKYQFYRFFQLMQRFIVVDLSNFYFDTAKDRLYTGGRESYTRRSCQS 782
Query: 989 TLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L L+R +AP++PH+AE+ +SHLP
Sbjct: 783 VLAAQLLCLVRAIAPVLPHMAEDAWSHLP 811
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 247/396 (62%), Gaps = 23/396 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
F LHDGPPYANG H+GHA+NKILKD R LLQG++V+YVPGWDCHGLPIELK + S
Sbjct: 65 FTLHDGPPYANGELHMGHALNKILKDFINRYQLLQGRKVYYVPGWDCHGLPIELKVLQSM 124
Query: 81 D----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
D K L+P+ +RKKA FA +T+N Q+ F+ +GV DWE N Y T +Y Q+
Sbjct: 125 DAEARKELTPIKLRKKAAQFAQKTVNEQRKSFKRFGVWGDWE-NPYLTLSPDYEAAQIGV 183
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQVPAHL 192
F ++ +IYR KPV+WSPSS TALAE+ELEY H SKSIY+ K+ + P L
Sbjct: 184 FGKMFLNGHIYRGRKPVHWSPSSGTALAEAELEYPEGHTSKSIYVVFKMIELSDNFPESL 243
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--------NVIVAKCLVES 244
+ IWTTTPW++PAN +A N L Y+V +KG+ +VIVA LV +
Sbjct: 244 KPLLPSMGVAIWTTTPWTIPANAAVAVNDKLTYAVVEIKGSALLDPQVKHVIVAADLVPA 303
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAH 303
L+ + +EV FPG L+ Y HP+ E+R+ ++ G ++++ GTGLVH AP H
Sbjct: 304 LEAKWGVSLEVKGTFPGSALEHSRYRHPL--EERENPVVVGGDYITTESGTGLVHTAPGH 361
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
GQ+D++ L +P+L+ + + G ++ +AG GLN+LG+G V+ ++ +L E
Sbjct: 362 GQEDYITGLKYGLPLLSPVDDNGNFTSEAGQ-FSGLNVLGEGNSSVVTALDSHSVLLMEE 420
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YPYDWRTKKP I +A++QWF E + AL
Sbjct: 421 AYVHKYPYDWRTKKPTIFRATEQWFASVEGFRQTAL 456
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ +AG GLN+LGEG V+ ++ +L E Y H YPYDWRTKKP
Sbjct: 377 LSPVDDNGNFTSEAGQ-FSGLNVLGEGNSSVVTALDSHSVLLMEEAYVHKYPYDWRTKKP 435
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL + V +VP + +K + R WCISRQR WGVPI
Sbjct: 436 TIFRATEQWFASVEGFRQTALEAIRSVQWVPATGEKRITSMTVSRSDWCISRQRSWGVPI 495
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY + + ++ + I H +I + G D WW + VE LL
Sbjct: 496 PVFYHVESNEPLMTQETIAHIQAIIAQKGSDAWWYMSVEDLL 537
>gi|412990009|emb|CCO20651.1| isoleucyl-tRNA synthetase [Bathycoccus prasinos]
Length = 1057
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/624 (37%), Positives = 354/624 (56%), Gaps = 52/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLK------------IKLNQVPAHLLEGATDLHALIWTTTP 465
TALAE+ELEY H+S+S+Y+ IK + + LL+G+ L +WTTTP
Sbjct: 256 TALAEAELEYPDVHVSQSVYVAFPIEATLEGANAIKDETLKSTLLDGS--LKLAVWTTTP 313
Query: 466 WSLPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFP--GQYLQD 523
W++PAN +A NP LEY V KG ++VA LV +L T + + + + P G ++
Sbjct: 314 WTMPANAAVAMNPKLEYRVCDFKGEKIVVANDLVASLSETLEDTLTALGESPFLGAEMEG 373
Query: 524 ITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 583
+TY HP K++ + ++ ++++ GTGLVH AP HGQDD++ L +P+ + + + G
Sbjct: 374 LTYQHPTIKDRVNPVIVGGDYITTDAGTGLVHTAPGHGQDDYIAGLKYNLPLHSPVDDLG 433
Query: 584 KYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQ 641
++ +AG L GLN+LGDG ++ + ++ +L E Y+H YPYDWRTKKP I +A++Q
Sbjct: 434 NFTEEAGSELFGLNVLGDGNEKCIEQLQAANALLKREPYEHKYPYDWRTKKPTIFRATEQ 493
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
WF E + +AL L+ V F+PES K +R ++ R WCISRQR WGVPIP F+ +T
Sbjct: 494 WFCSVEGFRDDALKALDSVKFIPESGSKRMRPMVSGRSDWCISRQRSWGVPIPCFFFEET 553
Query: 702 --IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN--SNVTKSNDILDIWFDSGI 757
++++E+ IKH ++ + G D W+ +E+LL + + S++ + D +D+WFDSG
Sbjct: 554 NEVLMDESIIKHVTDIVRKEGTDAWFMKDIEELLPSEHKSKASSLRRGTDTMDVWFDSGS 613
Query: 758 SWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
SW+ VL ++ P +Y+EG DQ GWF SSLLTSVA AP++ + HGFV+DE G
Sbjct: 614 SWNGVLNERGMNAPCDLYLEGSDQHRGWFQSSLLTSVAATGRAPYKTLLTHGFVLDENGY 673
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS GNV+ + + +G K K P YG D LR WVA+
Sbjct: 674 KMSKSKGNVVDPNFVIEGGK--------------------NQKTEPGYGADTLRLWVAS- 712
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
+ V IG N++ + ++ +KIR +LR+L+GV ++ +I+ D Y L R
Sbjct: 713 TDYNSDVSIGSNVIKQTSENYRKIRGTLRFLMGVENDFKSKEHAIAFDQLPGFDQYCLYR 772
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
L E ++ Y + +A A +N LS Y + KDRLY + R +
Sbjct: 773 LEETMKKIEIAYDNYNFA-AVNSEINAFTTFLSNVYLDVSKDRLYLGHPSDAKRRAAQTV 831
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVY 1013
+H + LL +API+PH AEE +
Sbjct: 832 VHELITNLLAALAPILPHTAEEAF 855
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/425 (42%), Positives = 255/425 (60%), Gaps = 24/425 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E+ + F LHDGPPYANG HIGHA+NKILKD R L+GKRV YVPGWD HGLPI
Sbjct: 104 ESKENQESFTLHDGPPYANGDLHIGHALNKILKDFITRYQALRGKRVRYVPGWDTHGLPI 163
Query: 73 ELKAITSKD-----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
ELK + S + K L+P+ +RKKA FAL + Q +F+ +G+ ++E N Y T
Sbjct: 164 ELKVLQSIEDPEVRKNLTPIKLRKKAAKFALGQVERQSKQFQRYGIWGEFE-NPYMTLQP 222
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL------ 181
Y +QL F ++ +IYR KPV+WSPSS+TALAE+ELEY HVS+S+Y+
Sbjct: 223 AYEASQLEVFGKMFLNGHIYRGKKPVHWSPSSQTALAEAELEYPDVHVSQSVYVAFPIEA 282
Query: 182 ------KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV 235
IK + + LL+G+ L +WTTTPW++PAN +A NP LEY V KG +
Sbjct: 283 TLEGANAIKDETLKSTLLDGS--LKLAVWTTTPWTMPANAAVAMNPKLEYRVCDFKGEKI 340
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFP--GQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
+VA LV SL T + + + + P G ++ +TY HP K++ + ++ ++++ G
Sbjct: 341 VVANDLVASLSETLEDTLTALGESPFLGAEMEGLTYQHPTIKDRVNPVIVGGDYITTDAG 400
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TGLVH AP HGQDD++ L +P+ + + + G ++ +AG L GLN+LGDG ++ + +
Sbjct: 401 TGLVHTAPGHGQDDYIAGLKYNLPLHSPVDDLGNFTEEAGSELFGLNVLGDGNEKCIEQL 460
Query: 354 EP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGI 411
+ +L E Y+H YPYDWRTKKP I +A++QWF E + +AL + G
Sbjct: 461 QAANALLKREPYEHKYPYDWRTKKPTIFRATEQWFCSVEGFRDDALKALDSVKFIPESGS 520
Query: 412 THDRP 416
RP
Sbjct: 521 KRMRP 525
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 103/159 (64%), Gaps = 4/159 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG L GLN+LG+G ++ + ++ +L E Y+H YPYDWRTKKP I
Sbjct: 429 VDDLGNFTEEAGSELFGLNVLGDGNEKCIEQLQAANALLKREPYEHKYPYDWRTKKPTIF 488
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL L+ V F+PES K +R ++ R WCISRQR WGVPIP F
Sbjct: 489 RATEQWFCSVEGFRDDALKALDSVKFIPESGSKRMRPMVSGRSDWCISRQRSWGVPIPCF 548
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ +T ++++E+ IKH ++ + G D W+ +E+LL
Sbjct: 549 FFEETNEVLMDESIIKHVTDIVRKEGTDAWFMKDIEELL 587
>gi|428305737|ref|YP_007142562.1| isoleucyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
gi|428247272|gb|AFZ13052.1| Isoleucyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
Length = 955
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/622 (39%), Positives = 353/622 (56%), Gaps = 45/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY HIS+S+Y+ + + V L + +L IWTTTPW++PAN
Sbjct: 197 TALAEAELEYPEGHISRSLYVAFPVTKLGDAVNESLQQFLPNLSVAIWTTTPWTIPANLA 256
Query: 474 IAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
++ NP L+Y+V +V+G +IVA LVE L T + V G+ L++ TY HP+
Sbjct: 257 VSVNPELKYAVVAVEGEQSNYLIVAADLVETLSETLGKNFQVKATVVGKDLENTTYRHPL 316
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+ + ++ +V++ GTGLVH AP HGQ+D+L+ +P+L+ + G ++ +AG
Sbjct: 317 FDRESPV-VIGGDYVTTESGTGLVHTAPGHGQEDYLVGQRYGLPILSPVDADGNFTEEAG 375
Query: 591 PGLEGLNILGDGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTER 648
GLN+LG+G V+ L E L E Y H YPYDWRTKKP I +A++QWF E
Sbjct: 376 Q-FAGLNVLGEGNTAVITALTEVGALLKEEAYSHKYPYDWRTKKPTIYRATEQWFASVEG 434
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNE 706
+ EAL+ + V ++P + + +++R WCISRQR WGVPIPVFYD T ++N+
Sbjct: 435 FRDEALSAIASVKWIPSQGENRITPMVSERSDWCISRQRSWGVPIPVFYDEATGEPLLNQ 494
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSHVLK 764
I + +I E G D WW LSVE+LL S N+ + K D +D+WFDSG SW+ VL+
Sbjct: 495 ETINYAQAIIAEKGSDAWWELSVEELLPESYRNNGKSYRKGTDTMDVWFDSGSSWAGVLQ 554
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSLLTSVA AP++ V HGF +DE+G KMSKSV
Sbjct: 555 EREELKYPADIYLEGSDQHRGWFQSSLLTSVATNGYAPYKTVLTHGFTLDEQGRKMSKSV 614
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + +G K K+ P YG DVLR WV++
Sbjct: 615 GNVIDPAIVIEGGKN--------------------QKEEPPYGADVLRLWVSSVDYSS-D 653
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQN 935
V I K+IL D KIR++ RYLLG LH+ + ++ +D Y+L R+ E
Sbjct: 654 VSISKSILKQMGDVRGKIRNTARYLLGSLHDFDPAKDAVPYEQLPELDRYLLHRMTEVFK 713
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ + +Q+ R + + NF V +LS FY + KDRLY + N R S +
Sbjct: 714 DVTEAFDSYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAENSLRRRSCQTVMAIALE 773
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
L + +AP++ H+AE+++ ++P
Sbjct: 774 NLAKAIAPVLSHMAEDIWQYIP 795
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/390 (45%), Positives = 251/390 (64%), Gaps = 16/390 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F+LHDGPPYANG HIGHA+NKILKDI + LL+G++V YVPGWDCHGLPIELK + +
Sbjct: 54 FVLHDGPPYANGALHIGHALNKILKDIINKYQLLKGRKVRYVPGWDCHGLPIELKVLQNM 113
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+PL +R+KAK FAL+T++ Q+ F+ +GV DW+ N Y T Y Q+
Sbjct: 114 KQQERQELTPLTLRRKAKEFALKTVDEQRQGFKRYGVWGDWD-NPYLTLKPSYEAAQIGV 172
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ----VPAHL 192
F + + YIYR LKPV+WSPSS+TALAE+ELEY H+S+S+Y+ + + V L
Sbjct: 173 FGQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHISRSLYVAFPVTKLGDAVNESL 232
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCLVESLKWTF 249
+ +L IWTTTPW++PAN ++ NP L+Y+V +V+G +IVA LVE+L T
Sbjct: 233 QQFLPNLSVAIWTTTPWTIPANLAVSVNPELKYAVVAVEGEQSNYLIVAADLVETLSETL 292
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
+ +V G+ L++ TY HP+ + + ++ +V++ GTGLVH AP HGQ+D+L
Sbjct: 293 GKNFQVKATVVGKDLENTTYRHPLFDRESPV-VIGGDYVTTESGTGLVHTAPGHGQEDYL 351
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL-HLVEPDVLWTEN-YQHSY 367
+ +P+L+ + G ++ +AG GLN+LG+G V+ L E L E Y H Y
Sbjct: 352 VGQRYGLPILSPVDADGNFTEEAGQ-FAGLNVLGEGNTAVITALTEVGALLKEEAYSHKY 410
Query: 368 PYDWRTKKPVILKASQQWFIDTERIKPEAL 397
PYDWRTKKP I +A++QWF E + EAL
Sbjct: 411 PYDWRTKKPTIYRATEQWFASVEGFRDEAL 440
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + G ++ +AG GLN+LGEG V+ L E L E Y H YPYDWRTKKP
Sbjct: 361 LSPVDADGNFTEEAGQ-FAGLNVLGEGNTAVITALTEVGALLKEEAYSHKYPYDWRTKKP 419
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EAL+ + V ++P + + +++R WCISRQR WGVPI
Sbjct: 420 TIYRATEQWFASVEGFRDEALSAIASVKWIPSQGENRITPMVSERSDWCISRQRSWGVPI 479
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
PVFYD T ++N+ I + +I E G D WW L VE+LL S N+
Sbjct: 480 PVFYDEATGEPLLNQETINYAQAIIAEKGSDAWWELSVEELLPESYRNN 528
>gi|158337034|ref|YP_001518209.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
gi|189082318|sp|B0C872.1|SYI_ACAM1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|158307275|gb|ABW28892.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
Length = 971
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/633 (39%), Positives = 358/633 (56%), Gaps = 52/633 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIK---LNQVPAHLL-EGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ K L++ LL E L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYVTFKVTGLSETAQPLLDEYLPTLKVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
++ NP L Y+V +IVA+ LVE L T ++ V+ PG+ L++ TY HP+
Sbjct: 256 VSLNPDLTYAVVKAGEDYLIVAEDLVETLTETLESSFKVIKTLPGKALENSTYQHPLF-- 313
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+R+ L+ +V++ GTGLVH AP HGQ+D+ + + +L+ + G ++ +AGP
Sbjct: 314 EREGPLVLGDYVTTESGTGLVHTAPGHGQEDYQVGQQYGLAMLSPVDGDGTFTDEAGP-F 372
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
GLN+L G + V+ ++ +L E+Y H YPYDWRTKKPVIL+A++QWF + +
Sbjct: 373 AGLNVLNGGNEAVIEALQSAGALLKEESYAHKYPYDWRTKKPVILRATEQWFASVDGFRE 432
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
L + VN++P + + +++R WCISRQR WGVPIPVFY+ T ++NEA +
Sbjct: 433 AVLDAIATVNWIPAQGENRITSMVSERSDWCISRQRNWGVPIPVFYNDATGEPLLNEATV 492
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLN---TSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
H ++ E G D WW L ++LL SD N+ K D +D+WFDSG SW+ V +
Sbjct: 493 NHIQGIVAEKGSDAWWELDNDELLPEPYRSDGNT-YRKGTDTMDVWFDSGSSWAAVCDQR 551
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SS+LTSVA AP++ V HGFV+DE+G KMSKS+GN
Sbjct: 552 EPLKYPAEMYLEGSDQHRGWFQSSILTSVATNGHAPYKTVLTHGFVLDEQGRKMSKSIGN 611
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA--HASKDPT 879
V+ + G K K+ P YG DVLR WV++ +AS
Sbjct: 612 VVDPAIVIAGGKN--------------------QKQDPPYGADVLRLWVSSVDYASD--- 648
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQN 935
VP+GKNIL D +KIR++ R+LLG LH+ + +++ +D YML R+ E
Sbjct: 649 VPLGKNILKQMADVYRKIRNTSRFLLGNLHDFDPAQDAVAYEDLPQLDRYMLHRITEVFT 708
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ + FQ+ R + + NF V +LS FY + KDRLY N + R S L
Sbjct: 709 DVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISEPNAQRRRSCQTVLAIALE 768
Query: 996 VLLRTVAPIMPHLAEEVYSHLP---SRQGTFSS 1025
L R +AP++ H+AE+++ LP Q F+S
Sbjct: 769 NLARAIAPVLSHMAEDIWQSLPYETEHQSVFAS 801
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/387 (45%), Positives = 245/387 (63%), Gaps = 14/387 (3%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F+LHDGPPYANG HIGHA+NKILKD + LLQG++V YVPGWDCHGLPIELK + +
Sbjct: 53 FVLHDGPPYANGDLHIGHALNKILKDTINKFQLLQGRKVRYVPGWDCHGLPIELKVLQNI 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
L+PL +R KA++FAL+T+ Q F+ +GV +WE N Y T EY Q+
Sbjct: 113 QPENRAKLTPLKLRWKARDFALKTVEKQSKSFQRYGVWGNWE-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK---LNQVPAHLL 193
F + + YIYR KPVYWSPSS+TALAE+ELEY H S+SIY+ K L++ LL
Sbjct: 172 FGKMALKGYIYRGFKPVYWSPSSQTALAEAELEYPEGHTSRSIYVTFKVTGLSETAQPLL 231
Query: 194 -EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD 252
E L IWTTTPW++P N ++ NP L Y+V +IVA+ LVE+L T ++
Sbjct: 232 DEYLPTLKVAIWTTTPWTIPGNLAVSLNPDLTYAVVKAGEDYLIVAEDLVETLTETLESS 291
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
+V+ PG+ L++ TY HP+ +R+ L+ +V++ GTGLVH AP HGQ+D+ +
Sbjct: 292 FKVIKTLPGKALENSTYQHPLF--EREGPLVLGDYVTTESGTGLVHTAPGHGQEDYQVGQ 349
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYD 370
+ +L+ + G ++ +AGP GLN+L G + V+ ++ +L E+Y H YPYD
Sbjct: 350 QYGLAMLSPVDGDGTFTDEAGP-FAGLNVLNGGNEAVIEALQSAGALLKEESYAHKYPYD 408
Query: 371 WRTKKPVILKASQQWFIDTERIKPEAL 397
WRTKKPVIL+A++QWF + + L
Sbjct: 409 WRTKKPVILRATEQWFASVDGFREAVL 435
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 99/162 (61%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AGP GLN+L G + V+ ++ +L E+Y H YPYDWRTKKP
Sbjct: 356 LSPVDGDGTFTDEAGP-FAGLNVLNGGNEAVIEALQSAGALLKEESYAHKYPYDWRTKKP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VIL+A++QWF + + L + VN++P + + +++R WCISRQR WGVPI
Sbjct: 415 VILRATEQWFASVDGFREAVLDAIATVNWIPAQGENRITSMVSERSDWCISRQRNWGVPI 474
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY+ T ++NEA + H ++ E G D WW L ++LL
Sbjct: 475 PVFYNDATGEPLLNEATVNHIQGIVAEKGSDAWWELDNDELL 516
>gi|255083528|ref|XP_002504750.1| predicted protein [Micromonas sp. RCC299]
gi|226520018|gb|ACO66008.1| predicted protein [Micromonas sp. RCC299]
Length = 954
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/649 (38%), Positives = 353/649 (54%), Gaps = 68/649 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL--NQVP-------AHLLEGATDLHALIWTTTPWSL 468
TALAE+ELEY H+S+S+Y+ L +P A +LE L +WTTTPW++
Sbjct: 177 TALAEAELEYPEGHVSQSVYVAFPLVSGNIPDGFPAEHASVLEAGASL--AVWTTTPWTM 234
Query: 469 PANQFIAFNPALEYSVASVKGAN--------------VIVAKCLVENLKWTFQTDIDVVC 514
PAN +A N LEYS V GA+ ++VA+ LV + T+ ++ +C
Sbjct: 235 PANAAVAVNDKLEYSFVKVTGASGDVEKESSRMVGKTLVVAQGLVAEVATTWGLTLETLC 294
Query: 515 DFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKI 573
PG L Y HP+ R ++ G ++++ GTGLVH AP HGQ+D++ L +
Sbjct: 295 TVPGSALVGFEYTHPMYG--RASPVVAGGDYITTDSGTGLVHTAPGHGQEDYMTGLKFGL 352
Query: 574 PVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVL-WTENYQHSYPYDWRTK 631
P+L+ + ++G ++ +AG L G ++L DG + + L D L E Y H YPYDWRTK
Sbjct: 353 PLLSPVDDKGLFTDEAGDDLVGKSVLKDGNEACIEKLRHSDALILQEPYNHKYPYDWRTK 412
Query: 632 KPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGV 691
KP I +A++QWF E + EALA L+++ FVP S K +R ++ R WCISRQR WGV
Sbjct: 413 KPTIFRATEQWFASVEGFRDEALAELDKIEFVPASGAKRMRPMVSGRNDWCISRQRSWGV 472
Query: 692 PIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSND 747
PIP FYD +T ++++A I+H ++ G D WW L + LL + D ++ + D
Sbjct: 473 PIPCFYDKETKEPLMDKATIEHVTEIVRTKGTDAWWELDLVDLLPDAYKDKADSLVRGTD 532
Query: 748 ILDIWFDSGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFL 803
+D+WFDSG SW+ V+K + PA +Y+EG DQ GWF SSLLT VA AP+ +
Sbjct: 533 TMDVWFDSGSSWAGVVKSRGLKYPADMYLEGSDQHRGWFQSSLLTGVAAAGKAPYEKILT 592
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGV 863
HGFV+DEKG KMSKS+GNVI I +G K K PA+G
Sbjct: 593 HGFVLDEKGYKMSKSLGNVIDPRLIIEGGKN--------------------QKTEPAFGA 632
Query: 864 DVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR- 920
D LR WV AS D T V IG NIL + D +K+R +LR+L+G + + ++
Sbjct: 633 DTLRLWV---ASTDYTSDVLIGVNILKQTSDAYRKLRGTLRFLMGNIGDFDPLLDAVPYD 689
Query: 921 ---YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDS 977
D Y L+R + MD Y QY++ + L +F LS Y KDRLY +S
Sbjct: 690 QLPSFDRYALRRTADMLAEMDRAYATHQYSQVTAQLQSFTAF-LSNVYLDASKDRLYVES 748
Query: 978 INGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
G R ++ I LL VAPI PH+AEE ++ LP + G S F
Sbjct: 749 PTGVPRRCAQTVVNEIVTRLLCVVAPIAPHMAEEAFTALPYKPGHESVF 797
Score = 333 bits (854), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/408 (43%), Positives = 245/408 (60%), Gaps = 35/408 (8%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
F LHDGPPYANG HIGHA+NKILKD R +++GKRV YVPGWDCHGLPIELK + S
Sbjct: 34 FTLHDGPPYANGDLHIGHALNKILKDFVNRYQMMKGKRVRYVPGWDCHGLPIELKVLQSI 93
Query: 81 D----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
D K L+P+ +RKKA+ FAL+T++ Q+ F +GV DWE + Y T EY Q+
Sbjct: 94 DADARKALTPIKLRKKARAFALKTVDKQRDAFRRYGVWGDWE-DPYLTLLPEYEAAQMEV 152
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL--NQVP----- 189
F ++ ++YR KPV+WSPSS TALAE+ELEY HVS+S+Y+ L +P
Sbjct: 153 FGQMFLNGHVYRGKKPVHWSPSSMTALAEAELEYPEGHVSQSVYVAFPLVSGNIPDGFPA 212
Query: 190 --AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------------- 234
A +LE L +WTTTPW++PAN +A N LEYS V GA+
Sbjct: 213 EHASVLEAGASL--AVWTTTPWTMPANAAVAVNDKLEYSFVKVTGASGDVEKESSRMVGK 270
Query: 235 -VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSK 292
++VA+ LV + T+ +E +C PG L Y HP+ R ++ G ++++
Sbjct: 271 TLVVAQGLVAEVATTWGLTLETLCTVPGSALVGFEYTHPMYG--RASPVVAGGDYITTDS 328
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH- 351
GTGLVH AP HGQ+D++ L +P+L+ + ++G ++ +AG L G ++L DG + +
Sbjct: 329 GTGLVHTAPGHGQEDYMTGLKFGLPLLSPVDDKGLFTDEAGDDLVGKSVLKDGNEACIEK 388
Query: 352 LVEPDVL-WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
L D L E Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 389 LRHSDALILQEPYNHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALA 436
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 99/162 (61%), Gaps = 4/162 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVL-WTENYQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG L G ++L +G + + L D L E Y H YPYDWRTKKP
Sbjct: 355 LSPVDDKGLFTDEAGDDLVGKSVLKDGNEACIEKLRHSDALILQEPYNHKYPYDWRTKKP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EALA L+ + FVP S K +R ++ R WCISRQR WGVPI
Sbjct: 415 TIFRATEQWFASVEGFRDEALAELDKIEFVPASGAKRMRPMVSGRNDWCISRQRSWGVPI 474
Query: 1224 PVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P FYD +T ++++A I+H ++ G D WW L + LL
Sbjct: 475 PCFYDKETKEPLMDKATIEHVTEIVRTKGTDAWWELDLVDLL 516
>gi|354567853|ref|ZP_08987020.1| Isoleucyl-tRNA synthetase [Fischerella sp. JSC-11]
gi|353541527|gb|EHC10994.1| Isoleucyl-tRNA synthetase [Fischerella sp. JSC-11]
Length = 958
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 252/643 (39%), Positives = 350/643 (54%), Gaps = 49/643 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY + V L E +L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFPVTSLAEAVKPALSEFLPNLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN-------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITY 526
+A NP L Y+V V + +IVA LVE L T +T + V G+ L+ TY
Sbjct: 256 VALNPELNYAVVEVTSSGEGLGFKYLIVAADLVERLSATLETPLSVKATVKGKDLEHSTY 315
Query: 527 IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
HP+ + + ++ +V++ GTGLVH AP HGQ+D+++ +P+L + + G ++
Sbjct: 316 RHPLYDRESPI-VIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGNFT 374
Query: 587 PDAGPGLEGLNILGDGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
P+AG GLN+LGDG V+ + +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 375 PEAGQ-FAGLNVLGDGNQAVIDALTIAGSLLKEEPYVHKYPYDWRTKKPTIFRATEQWFA 433
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTI 702
E + EAL + V ++P + + +A R WCISRQR WGVPIPVFYD
Sbjct: 434 SVEGFRAEALKAIASVRWIPAQGENRITPMVADRSDWCISRQRSWGVPIPVFYDEASGEP 493
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWS 760
++NE I H +I E G D WW LSVE+LL + N+ T K D +D+WFDSG SW+
Sbjct: 494 LLNEETIAHVQAIIAEKGSDAWWELSVEELLPQTYRNNGRTYRKGTDTMDVWFDSGSSWA 553
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
VLK + PA +Y+EG DQ GWF SSLLTSVA+ + AP++ V HGF +DE+G KM
Sbjct: 554 SVLKQRPELHYPADMYLEGSDQHRGWFQSSLLTSVAVNNCAPYKTVLTHGFALDEQGRKM 613
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNV+ + +G K KK PAYG DVLR WV++
Sbjct: 614 SKSLGNVVDPAIVIEGGKD--------------------QKKEPAYGADVLRLWVSS-VD 652
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLC 931
V +G NI+ D KIR++ + LLG LH+ + ++ +D YML R+
Sbjct: 653 YTSDVRLGSNIIKQLVDIRNKIRNTAKNLLGNLHDFDPAKDAVPYEQLPQLDKYMLHRMT 712
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
E + + FQ+ R + + NF V +LS FY + KDRLY + N R S
Sbjct: 713 EVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYMDIAKDRLYISTPNALRRRSCQTVYW 772
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQ 1034
L + +AP++ HLAE+++ +LP S F V LQ
Sbjct: 773 YALENLAKAIAPVLCHLAEDIWQYLPYHTPHKSVFESGWVQLQ 815
Score = 347 bits (890), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/394 (46%), Positives = 244/394 (61%), Gaps = 20/394 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R LL+G++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLRGRKVRYVPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++ + L+PL +R+KAK FAL +N Q+ F+ +GV DWEH Y T EY Q+
Sbjct: 113 KAAERQNLTPLQLRQKAKEFALNAVNEQRDSFKRYGVWGDWEH-PYLTLTPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ----VPAHL 192
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY + V L
Sbjct: 172 FGQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTSLAEAVKPAL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-------VIVAKCLVESL 245
E +L IWTTTPW++P N +A NP L Y+V V + +IVA LVE L
Sbjct: 232 SEFLPNLGVAIWTTTPWTIPGNLAVALNPELNYAVVEVTSSGEGLGFKYLIVAADLVERL 291
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
T +T + V G+ L+ TY HP+ + + ++ +V++ GTGLVH AP HGQ
Sbjct: 292 SATLETPLSVKATVKGKDLEHSTYRHPLYDRESPI-VIGGDYVTTESGTGLVHTAPGHGQ 350
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLWTENY 363
+D+++ +P+L + + G ++P+AG GLN+LGDG V+ + +L E Y
Sbjct: 351 EDYIVGQRYGLPILAPVDDNGNFTPEAGQ-FAGLNVLGDGNQAVIDALTIAGSLLKEEPY 409
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 410 VHKYPYDWRTKKPTIFRATEQWFASVEGFRAEAL 443
Score = 146 bits (368), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++P+AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I
Sbjct: 367 VDDNGNFTPEAGQ-FAGLNVLGDGNQAVIDALTIAGSLLKEEPYVHKYPYDWRTKKPTIF 425
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P + + +A R WCISRQR WGVPIPVF
Sbjct: 426 RATEQWFASVEGFRAEALKAIASVRWIPAQGENRITPMVADRSDWCISRQRSWGVPIPVF 485
Query: 1227 YD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
YD ++NE I H +I E G D WW L VE+LL + N+ T
Sbjct: 486 YDEASGEPLLNEETIAHVQAIIAEKGSDAWWELSVEELLPQTYRNNGRT 534
>gi|198426747|ref|XP_002131649.1| PREDICTED: similar to mitochondrial isoleucine tRNA synthetase [Ciona
intestinalis]
Length = 932
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 357/625 (57%), Gaps = 41/625 (6%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL-NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
GTALAESEL Y +H+S+S+Y+ L +++P + + L+WTT PW+LPANQ +
Sbjct: 207 GTALAESELVYNDNHVSRSVYVTFPLLSKLPELSFDDV--IKVLVWTTQPWTLPANQTLC 264
Query: 476 FNPALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
F+ ++Y +AS A+ ++A +E + +++ F G L+ + HP+ E
Sbjct: 265 FSSNIKYCIASCSHASGLYLLAVDCIEAIARQTGKKFNIIQTFDGSCLEGMICRHPMYLE 324
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++++ + ++SKGTG+VH APAHG +DF + + + + + G++ P L
Sbjct: 325 -RTVRMISSDVANTSKGTGVVHIAPAHGMEDFGIGQKHNLNTESSVNSDGEFMAGIDPNL 383
Query: 594 EGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG I G V+ +++ ++ + +HSYPYDWRTK+P+ + S QWF+DT +
Sbjct: 384 EGKFIFTTGNKAVVEMLKERMNLFHEHDCKHSYPYDWRTKQPIFVHTSNQWFVDTAMLAN 443
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
+A + + P++ + ++ +++ R YWCISRQR WG+PIPVFY + +++NE+ I
Sbjct: 444 KAEVAISGITTYPDNGRSSMLNRLQLRSYWCISRQRAWGLPIPVFYHRESGELLLNESTI 503
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP-- 767
+H +L+ +HG D WW S +LL + + +DILDIWFDSG+SW VL+D
Sbjct: 504 QHLVSLVLKHGADIWWEGSNSELLPSEYNADEYERGSDILDIWFDSGVSWDCVLRDNKNR 563
Query: 768 ---AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
A Y+EG DQ GWF SSLLTSV L+ AP++N+ +HGFV+DEKG KMSKS+GNV+
Sbjct: 564 TTEADFYIEGKDQYGGWFQSSLLTSVGLQGVAPYKNLMVHGFVLDEKGQKMSKSIGNVVD 623
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+T G K ++ PAYG D LRWWV A ++ V I
Sbjct: 624 PMVLTNGGK--------------------NPQRDPAYGADALRWWV-AESNVHQDVHIST 662
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSEST---GSISRYVDVYMLKRLCEFQNTMDTLY 941
I+ S+ + VQKIR+S+R++LG L+ E+ +D Y + L ++ + T Y
Sbjct: 663 TIIKSAAESVQKIRNSVRFMLGNLNEFDETKVVPTPAMLVLDQYFMDVLRTYRREVTTAY 722
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
+ Y+ +R+ L F + + S YFT+VKDRLYCD R S L+ VLL++V
Sbjct: 723 EVYDYSLVTRLTLKF-IKKFSNIYFTIVKDRLYCDEKESLRRRSCQSVLYFTLDVLLKSV 781
Query: 1002 APIMPHLAEEVYSHLPS-RQGTFSS 1025
API+PHL EE + P+ Q F S
Sbjct: 782 APILPHLVEETTLYNPTNNQSVFKS 806
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 180/403 (44%), Positives = 260/403 (64%), Gaps = 9/403 (2%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
C FS LY WQ +FILHDGPPYANG H+GHA+NKILKDIT R LL+G +VHY
Sbjct: 48 CDFSGLYKWQYLNNTSDKQFILHDGPPYANGDVHVGHALNKILKDITNRYKLLRGYQVHY 107
Query: 62 VPGWDCHGLPIELKAITSKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
PGWDCHGLPIE+KAI + + K L+ +IRKK+K+FA ETI QK F+ WGV+ADWE++
Sbjct: 108 KPGWDCHGLPIEIKAIKANEFKTLNTSEIRKKSKSFAEETIEIQKRAFQRWGVMADWENS 167
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
CY+T+DK+Y +L FY LYK+ ++YR LKPVYWSPSS TALAESEL Y +HVS+S+Y
Sbjct: 168 CYYTYDKDYQAKELNSFYKLYKRGFVYRALKPVYWSPSSGTALAESELVYNDNHVSRSVY 227
Query: 181 LKIK-LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIV 237
+ L+++P + + L+WTT PW+LPANQ + F+ ++Y +AS A+ ++
Sbjct: 228 VTFPLLSKLPELSFDDV--IKVLVWTTQPWTLPANQTLCFSSNIKYCIASCSHASGLYLL 285
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A +E++ ++ F G L+ + HP+ E R ++++ + ++SKGTG+V
Sbjct: 286 AVDCIEAIARQTGKKFNIIQTFDGSCLEGMICRHPMYLE-RTVRMISSDVANTSKGTGVV 344
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP-- 355
H APAHG +DF + + + + + G++ P LEG I G V+ +++
Sbjct: 345 HIAPAHGMEDFGIGQKHNLNTESSVNSDGEFMAGIDPNLEGKFIFTTGNKAVVEMLKERM 404
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
++ + +HSYPYDWRTK+P+ + S QWF+DT + +A V
Sbjct: 405 NLFHEHDCKHSYPYDWRTKQPIFVHTSNQWFVDTAMLANKAEV 447
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 7/167 (4%)
Query: 1104 HHLNL---ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDW 1158
H+LN + + G++ P LEG I G V+ +++ ++ + +HSYPYDW
Sbjct: 361 HNLNTESSVNSDGEFMAGIDPNLEGKFIFTTGNKAVVEMLKERMNLFHEHDCKHSYPYDW 420
Query: 1159 RTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRV 1218
RTK+P+ + S QWF+DT + +A + G+ P++ + S+ +++ R YWCISRQR
Sbjct: 421 RTKQPIFVHTSNQWFVDTAMLANKAEVAISGITTYPDNGRSSMLNRLQLRSYWCISRQRA 480
Query: 1219 WGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WG+PIPVFY + +++NE+ I+H +L+ +HG D WW +LL
Sbjct: 481 WGLPIPVFYHRESGELLLNESTIQHLVSLVLKHGADIWWEGSNSELL 527
>gi|427420559|ref|ZP_18910742.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
gi|425756436|gb|EKU97290.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
Length = 971
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/637 (38%), Positives = 351/637 (55%), Gaps = 50/637 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S SIY+ + + L +L IWTTTPW++PAN
Sbjct: 201 TALAEAELEYPEGHTSPSIYVGFPMVSASDTAEKALSPYLDNLGVAIWTTTPWTIPANVA 260
Query: 474 IAFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
+A N L Y+V V +IV K LVE L F+TD+ D G L TY HP
Sbjct: 261 VAVNSDLVYTVVEVASGAPYKYLIVGKDLVETLANVFETDLTPKVDINGADLAGSTYHHP 320
Query: 530 INKEQ----RDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
++ ++ R+ ++ G ++++ GTGLVH AP HG +DF + +P+L + +G
Sbjct: 321 LHSKEDTFNRESPIVIGGDYITTESGTGLVHTAPGHGMEDFGVGQKYGLPILCPVDERGN 380
Query: 585 YSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG EGLN+L + ++ L E + L E Y H YPYDWRTKKP I +A++QW
Sbjct: 381 FTAEAG-SFEGLNVLKTANEALIKALTEANTLLKHEPYVHKYPYDWRTKKPTIFRATEQW 439
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F E + EAL + +V ++P + + + R WCISRQR WGVPIP FYD +T
Sbjct: 440 FASVEGFRDEALKAISDVQWIPAQGENRITPMVGDRSDWCISRQRNWGVPIPAFYDEETG 499
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGIS 758
+++N+ I H + EHG D WWS+ VE+LL S N+ T K D +D+WFDSG S
Sbjct: 500 EVLMNQETIAHVRGIFAEHGSDAWWSMPVEELLPESYHNNGHTYRKGFDTMDVWFDSGSS 559
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V + P +Y+EG DQ GWF SSLLTSVA AP++ V HGF +DEKG
Sbjct: 560 WAAVADQREALKYPVDLYLEGSDQHRGWFQSSLLTSVATHGCAPYKTVLTHGFALDEKGR 619
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GNV+ ++I +G K K+ P YG DVLR WV++
Sbjct: 620 KMSKSIGNVVDPYEIIEGGKN--------------------KKQDPPYGADVLRLWVSS- 658
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKR 929
VPIGKNIL D +KIR++ R+LLG L++ + ++ +D YML R
Sbjct: 659 VDYSSDVPIGKNILKQLADVYRKIRNTSRFLLGNLYDFDPAKDAVPYDQMPSLDQYMLHR 718
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E +++ + +Q+ R + + NF V +LS FY + KDRLY + R S
Sbjct: 719 MTEIFAEVESAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISDAVSQRRRSCQTV 778
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L L +++AP++ H+AE+++ +P GT S F
Sbjct: 779 LAVALENLAKSIAPVLCHMAEDIWQFMPYETGTKSVF 815
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/401 (43%), Positives = 241/401 (60%), Gaps = 21/401 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F+LHDGPPYANG+ H+GHA+NK+LKDI + LL+ ++V YVPGWDCHGLPIELK
Sbjct: 53 NSGDVFVLHDGPPYANGSLHMGHALNKVLKDIINKYQLLRDRKVRYVPGWDCHGLPIELK 112
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + D+ L+PL++R+KAK FAL+T+ Q F +GV +WE Y T EY
Sbjct: 113 VLQTIDRKERANLTPLELRQKAKEFALDTVEKQAKGFRRFGVWGNWE-KPYMTLQPEYEA 171
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQ 187
QL F + + YIYR LK V+WSPSS+TALAE+ELEY H S SIY+ + +
Sbjct: 172 AQLDVFGQMVLKGYIYRGLKSVHWSPSSQTALAEAELEYPEGHTSPSIYVGFPMVSASDT 231
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVE 243
L +L IWTTTPW++PAN +A N L Y+V V +IV K LVE
Sbjct: 232 AEKALSPYLDNLGVAIWTTTPWTIPANVAVAVNSDLVYTVVEVASGAPYKYLIVGKDLVE 291
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQ----RDLKLLPAG-FVSSSKGTGLVH 298
+L F+TD+ D G L TY HP++ ++ R+ ++ G ++++ GTGLVH
Sbjct: 292 TLANVFETDLTPKVDINGADLAGSTYHHPLHSKEDTFNRESPIVIGGDYITTESGTGLVH 351
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDV 357
AP HG +DF + +P+L + +G ++ +AG EGLN+L + ++ L E +
Sbjct: 352 TAPGHGMEDFGVGQKYGLPILCPVDERGNFTAEAG-SFEGLNVLKTANEALIKALTEANT 410
Query: 358 LWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 411 LLKHEPYVHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 451
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVIL 1166
+ +G ++ +AG EGLN+L + ++ L E + L E Y H YPYDWRTKKP I
Sbjct: 375 VDERGNFTAEAG-SFEGLNVLKTANEALIKALTEANTLLKHEPYVHKYPYDWRTKKPTIF 433
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P + + + R WCISRQR WGVPIP F
Sbjct: 434 RATEQWFASVEGFRDEALKAISDVQWIPAQGENRITPMVGDRSDWCISRQRNWGVPIPAF 493
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
YD +T +++N+ I H + EHG D WWS+PVE+LL S N+ T
Sbjct: 494 YDEETGEVLMNQETIAHVRGIFAEHGSDAWWSMPVEELLPESYHNNGHT 542
>gi|113477079|ref|YP_723140.1| isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
gi|110168127|gb|ABG52667.1| Isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
Length = 1152
Score = 428 bits (1100), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/628 (38%), Positives = 350/628 (55%), Gaps = 53/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-----LHALIWTTTPWSLPANQ 472
TALAE+ELEY H S+SIY K+ + A +E + + L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHKSRSIYAAFKITNL-AKAVEKSLESYLEKLWVAIWTTTPWTIPGNL 254
Query: 473 FIAFNPALEYSV-------ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
++ NP L Y+V A K IVA VE L T T + V G+ L++ T
Sbjct: 255 AVSVNPDLNYAVVKPDADYAMGKDKLFIVAAEAVERLSATLGTTLTPVATVKGEDLENCT 314
Query: 526 YIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
Y HP+ R+ K++ G +V++ GTGLVH AP HGQ+D+++ + +L+ + GK
Sbjct: 315 YQHPLF--DRESKIVIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYSLSILSPVDGNGK 372
Query: 585 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG GL++L +G V+ ++ +L E Y+H YPYDWRTKKP I +A++QW
Sbjct: 373 FTAEAGE-FTGLSVLAEGNIAVIEALQNVNSLLKEEPYEHKYPYDWRTKKPTIFRATEQW 431
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F E + EAL + EVN++P + + + R WCISRQR WGVPIPVFYD T
Sbjct: 432 FASVEGFRSEALKAIAEVNWIPAQGENRITPMVNDRSDWCISRQRSWGVPIPVFYDEKTG 491
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGIS 758
++ E + H +I E G D WW +SVE+LL + K D +D+WFDSG S
Sbjct: 492 EPLLTEETVAHVQKIIAEKGSDAWWEMSVEELLPETYRQDAEKYRKGTDTMDVWFDSGSS 551
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V + + P +Y+EG DQ GWF SSLLTS+A AP++ V HGFV+DE G
Sbjct: 552 WAAVAQQREGLRYPVDIYLEGSDQHRGWFQSSLLTSIATNGVAPYQTVLTHGFVLDENGR 611
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GNV+ + +G K K+ PAYG D+LR WV++
Sbjct: 612 KMSKSLGNVVDPVIVIEGGK--------------------NQKQEPAYGADILRLWVSS- 650
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKR 929
VP+GKNIL D +KIR++ R+LLG +H+ + +++ +D YML R
Sbjct: 651 VDYSSDVPLGKNILKQIADIYRKIRNTARFLLGNIHDFDPAKDAVAYEEMPELDRYMLHR 710
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E + + +FQY R + + NF V +LS FY + KDRLY + + R S
Sbjct: 711 ITEVFAEVKDGFDKFQYFRFFQTIQNFCVVDLSNFYLDIAKDRLYISATDAFRRRSCQTV 770
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L L + +AP++PH+AE+++ +LP
Sbjct: 771 LVVAVENLAKAIAPVLPHMAEDIWQNLP 798
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 249/396 (62%), Gaps = 24/396 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
F LHDGPPYANG HIGHA+NKILKDI R +LQG++V YVPGWDCHGLPIELK I
Sbjct: 53 FTLHDGPPYANGNLHIGHALNKILKDIINRYQILQGRKVRYVPGWDCHGLPIELKVIQNI 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ L+P+++R+KA++FALETI+ Q+ F+ +GV DWEH Y T EY Q+
Sbjct: 113 KSAERAKLTPIELRRKARDFALETIDKQRESFKRYGVWGDWEH-PYMTLSPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY K+ + A +E +
Sbjct: 172 FGKMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHKSRSIYAAFKITNL-AKAVEKS 230
Query: 197 TD-----LHALIWTTTPWSLPANQFIAFNPALEYSV-------ASVKGANVIVAKCLVES 244
+ L IWTTTPW++P N ++ NP L Y+V A K IVA VE
Sbjct: 231 LESYLEKLWVAIWTTTPWTIPGNLAVSVNPDLNYAVVKPDADYAMGKDKLFIVAAEAVER 290
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAH 303
L T T + V G+ L++ TY HP+ R+ K++ G +V++ GTGLVH AP H
Sbjct: 291 LSATLGTTLTPVATVKGEDLENCTYQHPLF--DRESKIVIGGDYVTTESGTGLVHTAPGH 348
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTE 361
GQ+D+++ + +L+ + GK++ +AG GL++L +G V+ ++ +L E
Sbjct: 349 GQEDYIVGQRYSLSILSPVDGNGKFTAEAGE-FTGLSVLAEGNIAVIEALQNVNSLLKEE 407
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y+H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 408 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRSEAL 443
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + GK++ +AG GL++L EG V+ ++ +L E Y+H YPYDWRTKKP
Sbjct: 364 LSPVDGNGKFTAEAGE-FTGLSVLAEGNIAVIEALQNVNSLLKEEPYEHKYPYDWRTKKP 422
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EAL + VN++P + + + R WCISRQR WGVPI
Sbjct: 423 TIFRATEQWFASVEGFRSEALKAIAEVNWIPAQGENRITPMVNDRSDWCISRQRSWGVPI 482
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD T ++ E + H +I E G D WW + VE+LL
Sbjct: 483 PVFYDEKTGEPLLTEETVAHVQKIIAEKGSDAWWEMSVEELL 524
>gi|242012833|ref|XP_002427131.1| isoleucyl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212511402|gb|EEB14393.1| isoleucyl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 944
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/614 (38%), Positives = 353/614 (57%), Gaps = 54/614 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+EL Y D S ++ ++ ++ Q + + ++ LIWTTTPW+LP N+ + F+
Sbjct: 223 TALAEAELLY-VDISSTALTVRFEVVQNFS-----SEPVYLLIWTTTPWTLPLNKAVYFS 276
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+++YS+ + + I+A L+E+L+ + +I + + + L+ ++Y HP +K +
Sbjct: 277 NSIKYSLVKISNFSGMYIIASDLIESLQKKLKQEITIHSNMSCKELEGLSYKHPWDK-NK 335
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
LK+ + V+ S GTGL+H PAHG +DF++ L + + G Y+ D GP L
Sbjct: 336 VLKVFESSSVTLS-GTGLLHSVPAHGHEDFVMGLQNNLTPECFVDESGCYTSDLGPPLAN 394
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
LNI G+GK+ V+ + D++ +ENY HSYP+DWRT KPV ++A +QWFIDT ++K +AL
Sbjct: 395 LNIFGEGKNTVIKTLSSDIILSENYTHSYPHDWRTNKPVFIRACEQWFIDTNQLKNKALE 454
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVNEANIKHFC 713
L + ++ K + I +RPYWC+SRQR WGVPIPVF+ + +++++ I H C
Sbjct: 455 NLRD----SDTPDKYFQSLIKERPYWCLSRQRTWGVPIPVFFHKTSRRPLISKSLIHHIC 510
Query: 714 TLIDEHGPDFWWSLSVEQLLNTSDVN------SNVTKSNDILDIWFDSGISWSHVLKDKP 767
L + G D WW+ ++E+L N N+ + NDI+DIWFDSGISWS L +
Sbjct: 511 QLFESSGSDIWWTGTLEELFPDKICNELFVKRENIIRGNDIMDIWFDSGISWSFALNGRK 570
Query: 768 AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHD 827
+ V++EG DQ GWF SSLLTSVA+ + PF + HGF VDE G KMSKSVGNV+
Sbjct: 571 SDVFLEGKDQFGGWFQSSLLTSVAVGNGLPFDKILTHGFAVDENGKKMSKSVGNVVDPDT 630
Query: 828 ITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNIL 887
+ G A G+D LRWWV +H S + VP+ +IL
Sbjct: 631 VLNGKN--------------------------ALGIDTLRWWVGSH-SHNSLVPVSDSIL 663
Query: 888 NSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGE 943
S VQ IR RYLLG L N++ S + +D Y+L F ++ Y
Sbjct: 664 KSEFKTVQSIRLIFRYLLGAL-NNARSKDLLENDDLLTLDKYLLNSCYNFYKSVMHSYNT 722
Query: 944 FQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAP 1003
++ +L+FV N +S+ Y + +KDRLYCDS R + L+TL++I + L ++AP
Sbjct: 723 YKTYSVCSQILHFVPNNVSSRYVSAIKDRLYCDSQESSRRKACLYTLNSILYTLSYSLAP 782
Query: 1004 IMPHLAEEVYSHLP 1017
I+PHL EEV+ H P
Sbjct: 783 ILPHLVEEVFLHHP 796
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/400 (47%), Positives = 273/400 (68%), Gaps = 12/400 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
E F LY+WQR+ + GK EF+LHDGPPYANG PHIGHA+NKI KDI LRS L+QG+++H
Sbjct: 63 EANFLNLYAWQRKNVKGK-EFVLHDGPPYANGKPHIGHAINKISKDIILRSQLIQGRKIH 121
Query: 61 YVPGWDCHGLPIELKAITS-KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
YVPGWDCHGLPIEL A+ + + K L P+DIR KAKN AL QK F+SWGV+ +WE+
Sbjct: 122 YVPGWDCHGLPIELLALKNVETKNLKPIDIRNKAKNIALSMSKLQKESFKSWGVIGNWEN 181
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+CY+TFD Y+ NQL F+ +Y++ IY LKPV+WSPSS+TALAE+EL Y D S ++
Sbjct: 182 DCYYTFDTNYIINQLQIFWKMYERGLIYYGLKPVFWSPSSKTALAEAELLY-VDISSTAL 240
Query: 180 YLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIV 237
++ ++ Q + + ++ LIWTTTPW+LP N+ + F+ +++YS+ + + I+
Sbjct: 241 TVRFEVVQNFS-----SEPVYLLIWTTTPWTLPLNKAVYFSNSIKYSLVKISNFSGMYII 295
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A L+ESL+ + +I + + + L+ ++Y HP +K + LK+ + V+ S GTGL+
Sbjct: 296 ASDLIESLQKKLKQEITIHSNMSCKELEGLSYKHPWDK-NKVLKVFESSSVTLS-GTGLL 353
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H PAHG +DF++ L + + G Y+ D GP L LNI G+GK+ V+ + D+
Sbjct: 354 HSVPAHGHEDFVMGLQNNLTPECFVDESGCYTSDLGPPLANLNIFGEGKNTVIKTLSSDI 413
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +ENY HSYP+DWRT KPV ++A +QWFIDT ++K +AL
Sbjct: 414 ILSENYTHSYPHDWRTNKPVFIRACEQWFIDTNQLKNKAL 453
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 6/158 (3%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ G Y+ D GP L LNI GEGK+ V+ + D++ +ENY HSYP+DWRT KPV ++
Sbjct: 377 FVDESGCYTSDLGPPLANLNIFGEGKNTVIKTLSSDIILSENYTHSYPHDWRTNKPVFIR 436
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A +QWFIDT ++K +AL L ++ K + I +RPYWC+SRQR WGVPIPVF+
Sbjct: 437 ACEQWFIDTNQLKNKALENLRD----SDTPDKYFQSLIKERPYWCLSRQRTWGVPIPVFF 492
Query: 1228 DGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ +++++ I H C L + G D WW+ +E+L
Sbjct: 493 HKTSRRPLISKSLIHHICQLFESSGSDIWWTGTLEELF 530
>gi|359459207|ref|ZP_09247770.1| isoleucyl-tRNA synthetase [Acaryochloris sp. CCMEE 5410]
Length = 970
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/639 (38%), Positives = 359/639 (56%), Gaps = 49/639 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIK---LNQVPAHLL-EGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ K L++ LL E L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYVTFKVTGLSEAAQPLLDEYLPTLKVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
++ NP L Y+V +IVA+ LVE L T ++ ++ PG+ L++ TY HP+
Sbjct: 256 VSLNPDLTYAVVKAGEDYLIVAEDLVETLTETLESSFKIIKTLPGKALENSTYQHPLF-- 313
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+R+ L+ +V++ GTGLVH AP HGQ+D+ + + +L+ + G ++ +AGP
Sbjct: 314 EREGPLVLGDYVTTESGTGLVHTAPGHGQEDYQVGQQYGLAMLSPVDGDGTFTDEAGP-F 372
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
GLN+L G + V+ ++ +L E+Y H YPYDWRTKKPVIL+A++QWF + +
Sbjct: 373 AGLNVLNGGNEAVIEALQSAGALLKEESYAHKYPYDWRTKKPVILRATEQWFASVDGFRE 432
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
L + VN++P + + +++R WCISRQR WGVPIPVFY+ T ++NEA I
Sbjct: 433 AVLDAIATVNWIPAQGENRITSMVSERSDWCISRQRNWGVPIPVFYNDATGEPLLNEATI 492
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLN---TSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
H ++ E G D WW L ++LL SD N+ K D +D+WFDSG SW+ V +
Sbjct: 493 NHVQAIVAEKGSDAWWELDNDELLPEPYRSDGNT-YRKGTDTMDVWFDSGSSWAAVCDQR 551
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SS+LTSVA AP++ V HGFV+DE+G KMSKS+GN
Sbjct: 552 EPLKYPAEMYLEGSDQHRGWFQSSILTSVATNGHAPYKTVLTHGFVLDEQGRKMSKSIGN 611
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA--HASKDPT 879
V+ + G K K+ P YG DVLR WV++ +AS
Sbjct: 612 VVDPAIVIAGGKN--------------------QKQDPPYGADVLRLWVSSVDYASD--- 648
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQN 935
VP+GKNIL D +KIR++ R+LLG LH+ + +++ +D YML R+ E
Sbjct: 649 VPLGKNILKQMADVYRKIRNTSRFLLGNLHDFDPAQDAVNYEDLPQLDRYMLHRITEVFT 708
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ + FQ+ R + + NF V +LS FY KDRLY N R S L
Sbjct: 709 DVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDTAKDRLYISEPNNPRRRSCQTVLAIALE 768
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQ 1034
L R +AP++ H+AE+++ LP + S F ++L+
Sbjct: 769 NLARAIAPVLSHMAEDIWQSLPYQTEHQSVFASGWMHLE 807
Score = 338 bits (868), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/387 (45%), Positives = 246/387 (63%), Gaps = 14/387 (3%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F+LHDGPPYANG HIGHA+NKILKDI + LLQG++V YVPGWDCHGLPIELK + +
Sbjct: 53 FVLHDGPPYANGDLHIGHALNKILKDIINKFQLLQGRKVRYVPGWDCHGLPIELKVLQNI 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
L+PL +R KA++FAL+T+ Q F+ +GV +WE N Y T EY Q+
Sbjct: 113 QPENRAKLTPLKLRWKARDFALKTVEKQSKSFQRYGVWGNWE-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK---LNQVPAHLL 193
F + + YIYR KPVYWSPSS+TALAE+ELEY H S+SIY+ K L++ LL
Sbjct: 172 FGKMALKGYIYRGFKPVYWSPSSQTALAEAELEYPEGHTSRSIYVTFKVTGLSEAAQPLL 231
Query: 194 -EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD 252
E L IWTTTPW++P N ++ NP L Y+V +IVA+ LVE+L T ++
Sbjct: 232 DEYLPTLKVAIWTTTPWTIPGNLAVSLNPDLTYAVVKAGEDYLIVAEDLVETLTETLESS 291
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
+++ PG+ L++ TY HP+ +R+ L+ +V++ GTGLVH AP HGQ+D+ +
Sbjct: 292 FKIIKTLPGKALENSTYQHPLF--EREGPLVLGDYVTTESGTGLVHTAPGHGQEDYQVGQ 349
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYD 370
+ +L+ + G ++ +AGP GLN+L G + V+ ++ +L E+Y H YPYD
Sbjct: 350 QYGLAMLSPVDGDGTFTDEAGP-FAGLNVLNGGNEAVIEALQSAGALLKEESYAHKYPYD 408
Query: 371 WRTKKPVILKASQQWFIDTERIKPEAL 397
WRTKKPVIL+A++QWF + + L
Sbjct: 409 WRTKKPVILRATEQWFASVDGFREAVL 435
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 99/162 (61%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AGP GLN+L G + V+ ++ +L E+Y H YPYDWRTKKP
Sbjct: 356 LSPVDGDGTFTDEAGP-FAGLNVLNGGNEAVIEALQSAGALLKEESYAHKYPYDWRTKKP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VIL+A++QWF + + L + VN++P + + +++R WCISRQR WGVPI
Sbjct: 415 VILRATEQWFASVDGFREAVLDAIATVNWIPAQGENRITSMVSERSDWCISRQRNWGVPI 474
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY+ T ++NEA I H ++ E G D WW L ++LL
Sbjct: 475 PVFYNDATGEPLLNEATINHVQAIVAEKGSDAWWELDNDELL 516
>gi|284928634|ref|YP_003421156.1| Isoleucyl-tRNA synthetase [cyanobacterium UCYN-A]
gi|284809093|gb|ADB94798.1| Isoleucyl-tRNA synthetase [cyanobacterium UCYN-A]
Length = 960
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/623 (38%), Positives = 351/623 (56%), Gaps = 49/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN----QVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+S+SIY + ++ L + +DL +IWTTTPW++PAN
Sbjct: 196 TALAEAELEYPEGHVSRSIYTAFSVTNASQEITGILKDFLSDLGVVIWTTTPWTIPANLA 255
Query: 474 IAFNPALEYSVAS-----VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP ++YSV K +IVA+ LV+ L F+T + + F G L++ Y H
Sbjct: 256 VAVNPVIKYSVVEQTTGVCKHKYLIVAEDLVDKLSQVFETSLKIRATFSGNLLENTIYRH 315
Query: 529 PINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
+ R+ K++ G ++++S GTGLVH AP HGQ+D+L+ + +L+ + N+G +
Sbjct: 316 SLF--DRECKIVIGGDYINTSSGTGLVHTAPGHGQEDYLVGQKYGLEILSPVDNKGILTE 373
Query: 588 DAGPGLEGLNILGDGKDQVLH-LVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFID 645
+AGP GLN+L D + +++ L E VL E Y+H YPYDWRTKKP I +A++QWF
Sbjct: 374 EAGP-FAGLNVLKDANEVIINRLKEEKVLIKEELYEHKYPYDWRTKKPTIFRATEQWFAS 432
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
E + A++ ++ VN++P + + R WCISRQR WGVPIPVFYD +T +
Sbjct: 433 VEGFRAHAISAIKNVNWIPSQGINRITSMVNDRSDWCISRQRSWGVPIPVFYDKETNEAL 492
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSH 761
+ E +K+ + G + WW +S+E+LL + K D +D+WFDSG SW+
Sbjct: 493 LTEETVKNIQEIFARKGANAWWEMSIEKLLPEEYKQDHHRYRKGTDTMDVWFDSGSSWAS 552
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V+K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+D++G KMS
Sbjct: 553 VIKQQSKSKYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDQQGRKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GNVI+ I G GN KK PAYG DVLR WV++
Sbjct: 613 KSLGNVINPDVIING-----------GN---------NKKKEPAYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
V +G+ IL D +KIR++ R+LLG LH+ ++S +D YML R+ E
Sbjct: 652 SSDVLVGETILKQISDVYRKIRNTARFLLGNLHDFDPQKDTVSYEKLPELDRYMLNRIAE 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + F ++ + + NF + +LS FY + KDRLY S N R S L
Sbjct: 712 VSKEVTKAFETFHFSNFYQAIQNFCIVDLSNFYLDIAKDRLYISSPNSFRRRSCQTVLFL 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSH 1015
L +AP++ H+AE+++ H
Sbjct: 772 AIKNLSTMIAPVLSHMAEDIWQH 794
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/393 (46%), Positives = 256/393 (65%), Gaps = 20/393 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK---AI 77
FILHDGPPYANG+ H+GHA+NKILKD + LLQG ++ Y+PGWDCHGLPIELK +I
Sbjct: 53 FILHDGPPYANGSLHMGHALNKILKDFINKYKLLQGHKISYIPGWDCHGLPIELKVLQSI 112
Query: 78 TSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+SK++ L+PL +R KA++FAL+T Q F+ GV DW HN Y T EY Q+
Sbjct: 113 SSKERQNLNPLQLRYKARDFALKTQQEQAKSFQRLGVWGDW-HNPYLTMLPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQVPAHL 192
F+N++ + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SIY + ++ L
Sbjct: 172 FWNMFNKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHVSRSIYTAFSVTNASQEITGIL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS-----VKGANVIVAKCLVESLKW 247
+ +DL +IWTTTPW++PAN +A NP ++YSV K +IVA+ LV+ L
Sbjct: 232 KDFLSDLGVVIWTTTPWTIPANLAVAVNPVIKYSVVEQTTGVCKHKYLIVAEDLVDKLSQ 291
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQD 306
F+T +++ F G L++ Y H + R+ K++ G ++++S GTGLVH AP HGQ+
Sbjct: 292 VFETSLKIRATFSGNLLENTIYRHSLF--DRECKIVIGGDYINTSSGTGLVHTAPGHGQE 349
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWTEN-YQ 364
D+L+ + +L+ + N+G + +AGP GLN+L D + +++ L E VL E Y+
Sbjct: 350 DYLVGQKYGLEILSPVDNKGILTEEAGP-FAGLNVLKDANEVIINRLKEEKVLIKEELYE 408
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YPYDWRTKKP I +A++QWF E + A+
Sbjct: 409 HKYPYDWRTKKPTIFRATEQWFASVEGFRAHAI 441
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + N+G + +AGP GLN+L + + +++ L E VL E Y+H YPYDWRTKKP
Sbjct: 362 LSPVDNKGILTEEAGP-FAGLNVLKDANEVIINRLKEEKVLIKEELYEHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + A++ ++ VN++P + + R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRAHAISAIKNVNWIPSQGINRITSMVNDRSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E +K+ + G + WW + +E+LL
Sbjct: 481 PVFYDKETNEALLTEETVKNIQEIFARKGANAWWEMSIEKLL 522
>gi|425436914|ref|ZP_18817344.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
gi|389678274|emb|CCH92835.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
Length = 952
Score = 425 bits (1092), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/626 (39%), Positives = 346/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTSVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L F T + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL TS D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPTSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPLKDAVAYEELPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 185/403 (45%), Positives = 247/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTSVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L F T + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 99/165 (60%), Gaps = 5/165 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
PVFYD +T ++ E I H + G + WW L VE+LL TS
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELLPTS 518
>gi|416383684|ref|ZP_11684493.1| Isoleucyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
gi|357265205|gb|EHJ13999.1| Isoleucyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
Length = 940
Score = 425 bits (1092), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/625 (38%), Positives = 349/625 (55%), Gaps = 49/625 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SI+ + +V L E +L IWTTTPW+LP N
Sbjct: 177 TALAEAELEYPEGHTSRSIFAAFPIIKVSKDLEETLKPFLNNLGVAIWTTTPWTLPGNLA 236
Query: 474 IAFNPALEYSVA-----SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V + K +IVA LVE L TF+T++ V PG+ L+ Y H
Sbjct: 237 VALNPDLNYAVVEQNSDACKYQYLIVAADLVERLSTTFETELTVKATLPGKALEHTIYRH 296
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ L+ +V++ GTGLVH AP HGQ+D+L+ + VL+ + +G ++ +
Sbjct: 297 PLYDRESEI-LIGGDYVTTESGTGLVHTAPGHGQEDYLVGQRYGLGVLSPVDAKGNFTEE 355
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GLN+L D + +++ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 356 AGQ-FAGLNVLKDANEVIINELQEKGSLLKEEAYQHKYPYDWRTKKPTIFRATEQWFASV 414
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + AL ++ VN+VP + + + R WCISRQR WG+PIPVFY+ +T ++
Sbjct: 415 EGFRDAALTAIKTVNWVPSQGENRITSMVGDRSDWCISRQRSWGLPIPVFYNQETNEPLL 474
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLL---NTSDVNSNVTKSNDILDIWFDSGISWSH 761
E IK+ + E G D WW +S+E+LL +D + K D +D+WFDSG SW+
Sbjct: 475 TEETIKYIQKIFAEKGSDAWWEMSIEELLPEQYKADAD-KYRKGTDTMDVWFDSGSSWAS 533
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMS
Sbjct: 534 VAKQREELKYPADIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGYKMS 593
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN++ + I G GN K+ P YG D++R WV++
Sbjct: 594 KSLGNIVDPNVIING-----------GN---------NHKQEPPYGADLVRLWVSS-VDY 632
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
+ IGK IL D +KIR++ R+LLG LH+ ++S +D YML R+ E
Sbjct: 633 SSDIRIGKTILKQLFDIYRKIRNTARFLLGNLHDFDPKQHTVSYEELPELDRYMLHRITE 692
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + +Q+ R + + NF V +LS FY + KDRLY + R S L
Sbjct: 693 VFTEVTDAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISHLESIRRRSCQTVLAV 752
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
L + +AP++ H+AE+++ P
Sbjct: 753 AIENLAKAIAPVLCHMAEDIWQFFP 777
Score = 333 bits (854), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/403 (44%), Positives = 250/403 (62%), Gaps = 19/403 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N + F+LHDGPPYANG+ H+GHA+NK LKDI + L++G +V YVPGWDCHGLPIELK
Sbjct: 29 NPEEVFVLHDGPPYANGSLHMGHALNKTLKDIINKYKLMRGHKVRYVPGWDCHGLPIELK 88
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + + L+PL +R+KA +FAL+T Q F+ +GV +WEH Y T EY
Sbjct: 89 VLQSMKSKERQGLTPLKLRRKASDFALKTQQEQAKAFKRFGVWGNWEH-PYLTLTPEYEA 147
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SI+ + +V
Sbjct: 148 AQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIFAAFPIIKVSKD 207
Query: 192 LLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-----SVKGANVIVAKCLV 242
L E +L IWTTTPW+LP N +A NP L Y+V + K +IVA LV
Sbjct: 208 LEETLKPFLNNLGVAIWTTTPWTLPGNLAVALNPDLNYAVVEQNSDACKYQYLIVAADLV 267
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
E L TF+T++ V PG+ L+ Y HP+ + ++ L+ +V++ GTGLVH AP
Sbjct: 268 ERLSTTFETELTVKATLPGKALEHTIYRHPLYDRESEI-LIGGDYVTTESGTGLVHTAPG 326
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWT 360
HGQ+D+L+ + VL+ + +G ++ +AG GLN+L D + +++ ++ +L
Sbjct: 327 HGQEDYLVGQRYGLGVLSPVDAKGNFTEEAGQ-FAGLNVLKDANEVIINELQEKGSLLKE 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC-KTV 402
E YQH YPYDWRTKKP I +A++QWF E + AL KTV
Sbjct: 386 EAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALTAIKTV 428
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + +G ++ +AG GLN+L + + +++ ++ +L E YQH YPYDWRTKKP
Sbjct: 343 LSPVDAKGNFTEEAGQ-FAGLNVLKDANEVIINELQEKGSLLKEEAYQHKYPYDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ VN+VP + + + R WCISRQR WG+PI
Sbjct: 402 TIFRATEQWFASVEGFRDAALTAIKTVNWVPSQGENRITSMVGDRSDWCISRQRSWGLPI 461
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY+ +T ++ E IK+ + E G D WW + +E+LL
Sbjct: 462 PVFYNQETNEPLLTEETIKYIQKIFAEKGSDAWWEMSIEELL 503
>gi|170078363|ref|YP_001735001.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
gi|169886032|gb|ACA99745.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
Length = 963
Score = 424 bits (1091), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/636 (38%), Positives = 350/636 (55%), Gaps = 52/636 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN----QVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ + + A L E A L IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSQSIYVSFPITDLSPEAKATLGEFADSLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVASVKGA-----NVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP LEY+V G+ ++VAK L E+L TF + V F G+ L+ TY H
Sbjct: 256 VAINPDLEYAVVETDGSLCAQKYLVVAKDLAESLTKTFDAALTVKTSFKGEILEHCTYQH 315
Query: 529 PINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
P+ R ++ G ++++ GTGLVH AP HGQ+D++ +P+L+ + +G +
Sbjct: 316 PLY--NRTSPVVAGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLPILSPVDAEGTLTE 373
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
+AG GLN+L + ++ + +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 374 EAGE-FAGLNVLDGANNAIIAALTEKRALLKQEAYQHKYPYDWRTKKPTIFRATEQWFAS 432
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
E + EAL ++ V ++P + + + R WCISRQR WGVPIPVFYD +T +
Sbjct: 433 VEGFRDEALKAIKGVRWIPAQGENRITAMVGDRSDWCISRQRNWGVPIPVFYDEETGEAL 492
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSH 761
+NE I H +I + G D WW SVE+LL D K D +D+WFDSG SW+
Sbjct: 493 LNETTINHVKEIIAKEGSDAWWKRSVEELLPEEYRDNGRTYRKGTDTMDVWFDSGSSWAA 552
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + P +Y+EG DQ GWF SSLLTSVA+ + AP++ V HGFV+DEKG KMS
Sbjct: 553 VAKQRDGLNYPVDLYLEGSDQHRGWFQSSLLTSVAVNNVAPYKTVLTHGFVLDEKGYKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GNV+ + I G K K P YG DVLR WV++
Sbjct: 613 KSLGNVVDPNIIINGGKN--------------------QKTEPPYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCE 932
VPIG+ IL D +KIR++ R+LLG +H+ + +++ +D Y+L +
Sbjct: 652 SSDVPIGQTILKQLADVYRKIRNTARFLLGNIHDFDPAKDAVAYSDLPELDKYILHQTHN 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + EFQ+ + + + NF V +LS FY + KDRLY +N R S +
Sbjct: 712 VFTEVTEAFEEFQFFKFFQKVQNFCVVDLSNFYLDIAKDRLYISDVNAPRRRSCQTVMAI 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP---SRQGTFSS 1025
I L + +AP++ H+AE+++ +LP Q FS+
Sbjct: 772 ILETLAKAIAPVLCHMAEDIWQNLPYETEHQSVFSA 807
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/398 (45%), Positives = 243/398 (61%), Gaps = 20/398 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N K F LHDGPPYANG H+GHA+NK+LKDI + LLQG + HYVPGWDCHGLPIELK
Sbjct: 48 NPKDFFTLHDGPPYANGDLHMGHALNKVLKDIINKYKLLQGYKTHYVPGWDCHGLPIELK 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + L+PL +R KA++FAL+T Q A F+ +GV DWE N Y T EY
Sbjct: 108 VLQNLSADARQNLTPLKLRYKARDFALKTQKAQAAGFQRYGVWGDWE-NPYLTLTPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN----Q 187
Q+ F ++ + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY+ + +
Sbjct: 167 AQIGVFGDMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSQSIYVSFPITDLSPE 226
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA-----NVIVAKCLV 242
A L E A L IWTTTPW+LP N +A NP LEY+V G+ ++VAK L
Sbjct: 227 AKATLGEFADSLGVAIWTTTPWTLPGNLAVAINPDLEYAVVETDGSLCAQKYLVVAKDLA 286
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAP 301
ESL TF + V F G+ L+ TY HP+ R ++ G ++++ GTGLVH AP
Sbjct: 287 ESLTKTFDAALTVKTSFKGEILEHCTYQHPLY--NRTSPVVAGGDYITTESGTGLVHTAP 344
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HGQ+D++ +P+L+ + +G + +AG GLN+L + ++ + +L
Sbjct: 345 GHGQEDYITGQKYGLPILSPVDAEGTLTEEAGE-FAGLNVLDGANNAIIAALTEKRALLK 403
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E YQH YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 404 QEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 441
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + +G + +AG GLN+L + ++ + +L E YQH YPYDWRTKKP
Sbjct: 362 LSPVDAEGTLTEEAGE-FAGLNVLDGANNAIIAALTEKRALLKQEAYQHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EAL ++GV ++P + + + R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDEALKAIKGVRWIPAQGENRITAMVGDRSDWCISRQRNWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++NE I H +I + G D WW VE+LL
Sbjct: 481 PVFYDEETGEALLNETTINHVKEIIAKEGSDAWWKRSVEELL 522
>gi|67921387|ref|ZP_00514905.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
gi|67856499|gb|EAM51740.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
Length = 940
Score = 424 bits (1091), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/625 (38%), Positives = 349/625 (55%), Gaps = 49/625 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SI+ + +V L E +L IWTTTPW+LP N
Sbjct: 177 TALAEAELEYPEGHTSRSIFAAFPIIKVSKDLEETLKPFLNNLGVAIWTTTPWTLPGNLA 236
Query: 474 IAFNPALEYSVA-----SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V + K +IVA LVE L TF+T++ V PG+ L+ Y H
Sbjct: 237 VALNPDLNYAVVEQNSDACKYQYLIVAADLVERLSTTFETELTVKATLPGKALEHTIYRH 296
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ L+ +V++ GTGLVH AP HGQ+D+L+ + VL+ + +G ++ +
Sbjct: 297 PLYDRESEI-LIGGDYVTTESGTGLVHTAPGHGQEDYLVGQRYGLGVLSPVDAKGNFTEE 355
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GLN+L D + +++ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 356 AGQ-FAGLNVLKDANEVIINELQEKGSLLKEEAYQHKYPYDWRTKKPTIFRATEQWFASV 414
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + AL ++ VN+VP + + + R WCISRQR WG+PIPVFY+ +T ++
Sbjct: 415 EGFRDAALTAIKTVNWVPSQGENRITSMVGDRSDWCISRQRSWGLPIPVFYNQETNEPLL 474
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLL---NTSDVNSNVTKSNDILDIWFDSGISWSH 761
E IK+ + E G D WW +S+E+LL +D + K D +D+WFDSG SW+
Sbjct: 475 TEETIKYIQKIFAEKGSDAWWEMSIEELLPEQYKADAD-KYRKGTDTMDVWFDSGSSWAS 533
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMS
Sbjct: 534 VAKQREELKYPVDIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGYKMS 593
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN++ + I G GN K+ P YG D++R WV++
Sbjct: 594 KSLGNIVDPNVIING-----------GN---------NHKQEPPYGADLVRLWVSS-VDY 632
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
+ IGK IL D +KIR++ R+LLG LH+ ++S +D YML R+ E
Sbjct: 633 SSDIRIGKTILKQLFDIYRKIRNTARFLLGNLHDFDPKQHTVSYEELPELDRYMLHRITE 692
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + +Q+ R + + NF V +LS FY + KDRLY + R S L
Sbjct: 693 VFTEVTDAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISHLESIRRRSCQTVLAV 752
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
L + +AP++ H+AE+++ LP
Sbjct: 753 AIENLAKAIAPVLCHMAEDIWQFLP 777
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/403 (44%), Positives = 250/403 (62%), Gaps = 19/403 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N + F+LHDGPPYANG+ H+GHA+NK LKDI + L++G +V YVPGWDCHGLPIELK
Sbjct: 29 NPEEVFVLHDGPPYANGSLHMGHALNKTLKDIINKYKLMRGHKVRYVPGWDCHGLPIELK 88
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + + L+PL +R+KA +FAL+T Q F+ +GV +WEH Y T EY
Sbjct: 89 VLQSMKSKERQGLTPLKLRRKASDFALKTQQEQAKAFKRFGVWGNWEH-PYLTLTPEYEA 147
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SI+ + +V
Sbjct: 148 AQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIFAAFPIIKVSKD 207
Query: 192 LLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-----SVKGANVIVAKCLV 242
L E +L IWTTTPW+LP N +A NP L Y+V + K +IVA LV
Sbjct: 208 LEETLKPFLNNLGVAIWTTTPWTLPGNLAVALNPDLNYAVVEQNSDACKYQYLIVAADLV 267
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
E L TF+T++ V PG+ L+ Y HP+ + ++ L+ +V++ GTGLVH AP
Sbjct: 268 ERLSTTFETELTVKATLPGKALEHTIYRHPLYDRESEI-LIGGDYVTTESGTGLVHTAPG 326
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWT 360
HGQ+D+L+ + VL+ + +G ++ +AG GLN+L D + +++ ++ +L
Sbjct: 327 HGQEDYLVGQRYGLGVLSPVDAKGNFTEEAGQ-FAGLNVLKDANEVIINELQEKGSLLKE 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC-KTV 402
E YQH YPYDWRTKKP I +A++QWF E + AL KTV
Sbjct: 386 EAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALTAIKTV 428
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + +G ++ +AG GLN+L + + +++ ++ +L E YQH YPYDWRTKKP
Sbjct: 343 LSPVDAKGNFTEEAGQ-FAGLNVLKDANEVIINELQEKGSLLKEEAYQHKYPYDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ VN+VP + + + R WCISRQR WG+PI
Sbjct: 402 TIFRATEQWFASVEGFRDAALTAIKTVNWVPSQGENRITSMVGDRSDWCISRQRSWGLPI 461
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY+ +T ++ E IK+ + E G D WW + +E+LL
Sbjct: 462 PVFYNQETNEPLLTEETIKYIQKIFAEKGSDAWWEMSIEELL 503
>gi|425450538|ref|ZP_18830363.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
gi|389768600|emb|CCI06355.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
Length = 952
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/626 (39%), Positives = 346/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLRPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L TF T + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPLKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 186/403 (46%), Positives = 248/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLRPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L TF T + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|354552275|ref|ZP_08971583.1| Isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
gi|353555597|gb|EHC24985.1| Isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
Length = 940
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/625 (38%), Positives = 348/625 (55%), Gaps = 49/625 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SI+ IK ++ +L+ + L IWTTTPW+LP N
Sbjct: 177 TALAEAELEYPEGHTSRSIFAAFPIIKASKDTEEILQPFLNKLGVAIWTTTPWTLPGNLA 236
Query: 474 IAFNPALEYSVASVKG-----ANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V +IVA LVE L TF+T++ V PG+ L+ Y H
Sbjct: 237 VALNPDLNYAVVEQNSDVCNYQYLIVAADLVERLSTTFETELTVKATLPGKALEHTIYRH 296
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ L+ +V++ GTGLVH AP HGQ+D+++ + +L+ + +G ++ +
Sbjct: 297 PLYDRESEI-LIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLGILSPVDAKGNFTEE 355
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
A GLN+L D + +++ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 356 ARQ-FAGLNVLKDANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKPTIFRATEQWFASV 414
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
+ + AL ++ V ++P + + ++ R WCISRQR WG+PIPVFYD +T ++
Sbjct: 415 KGFRDAALTAIKTVQWIPAQGENRITPMVSDRSDWCISRQRSWGLPIPVFYDEETNEPLL 474
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLL---NTSDVNSNVTKSNDILDIWFDSGISWSH 761
E IKH T+ E G D WW +S+E LL +D + K D +D+WFDSG SW+
Sbjct: 475 TEETIKHIQTIFAEKGSDAWWEMSIEALLPDQYKADAH-KYRKGTDTMDVWFDSGSSWAS 533
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMS
Sbjct: 534 VAKQRPELKYPADIYLEGSDQHRGWFQSSLLTSVAVNEIAPYKTVLTHGFVLDEKGHKMS 593
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN++ + I G K K+ P YG DVLR WV++
Sbjct: 594 KSLGNIVDPNVIINGGK--------------------NQKQEPPYGADVLRLWVSS-VDY 632
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
VPIGK IL D +KIR++ R+LLG LH+ ++S +D YML R+ E
Sbjct: 633 SSDVPIGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKKDTVSYEELPELDRYMLHRITE 692
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + +Q+ R + + NF V +LS FY + KDRLY R S L
Sbjct: 693 VFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISHPESIRRRSCQTVLAI 752
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
L + +AP++ H+AE+++ LP
Sbjct: 753 AIENLAKAIAPVLCHMAEDIWQFLP 777
Score = 322 bits (826), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 249/403 (61%), Gaps = 19/403 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N + F+LHDGPPYANG+ H+GHA+NK LKDI + LL+G +V YVPGWDCHGLPIELK
Sbjct: 29 NPEEVFVLHDGPPYANGSLHMGHALNKTLKDIINKYKLLRGYKVRYVPGWDCHGLPIELK 88
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + + L+PL +R KA++FAL+T Q F+ +GV DWE N Y T EY
Sbjct: 89 VLQSMKSKEREGLTPLKLRHKARDFALKTQEEQAKGFKRFGVWGDWE-NPYLTLTPEYEA 147
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK---IKLNQV 188
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SI+ IK ++
Sbjct: 148 AQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIFAAFPIIKASKD 207
Query: 189 PAHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-----ANVIVAKCLV 242
+L+ + L IWTTTPW+LP N +A NP L Y+V +IVA LV
Sbjct: 208 TEEILQPFLNKLGVAIWTTTPWTLPGNLAVALNPDLNYAVVEQNSDVCNYQYLIVAADLV 267
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
E L TF+T++ V PG+ L+ Y HP+ + ++ L+ +V++ GTGLVH AP
Sbjct: 268 ERLSTTFETELTVKATLPGKALEHTIYRHPLYDRESEI-LIGGDYVTTESGTGLVHTAPG 326
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWT 360
HGQ+D+++ + +L+ + +G ++ +A GLN+L D + +++ ++ +L
Sbjct: 327 HGQEDYMVGQRYGLGILSPVDAKGNFTEEARQ-FAGLNVLKDANEVIINELKEKGSLLKE 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC-KTV 402
E YQH YPYDWRTKKP I +A++QWF + + AL KTV
Sbjct: 386 EAYQHKYPYDWRTKKPTIFRATEQWFASVKGFRDAALTAIKTV 428
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + +G ++ +A GLN+L + + +++ ++ +L E YQH YPYDWRTKKP
Sbjct: 343 LSPVDAKGNFTEEARQ-FAGLNVLKDANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF + + AL ++ V ++P + + ++ R WCISRQR WG+PI
Sbjct: 402 TIFRATEQWFASVKGFRDAALTAIKTVQWIPAQGENRITPMVSDRSDWCISRQRSWGLPI 461
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E IKH T+ E G D WW + +E LL
Sbjct: 462 PVFYDEETNEPLLTEETIKHIQTIFAEKGSDAWWEMSIEALL 503
>gi|434396655|ref|YP_007130659.1| Isoleucyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
gi|428267752|gb|AFZ33693.1| Isoleucyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
Length = 958
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/633 (39%), Positives = 352/633 (55%), Gaps = 48/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H S+S+Y I L + L + +L IWTTTPW++P N +
Sbjct: 196 TALAEAELEYPEGHTSRSVYAAFPVISLGEDAKELEQYLPNLSVAIWTTTPWTIPGNLAV 255
Query: 475 AFNPALEYSVASVKGAN------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
A N LEY+V V + +IVAK LVE L T T++ V G+ L+ ITY H
Sbjct: 256 AVNGDLEYAVVDVGTIHELSLQYLIVAKDLVEKLSATLGTNLTVKTTLLGKALEGITYRH 315
Query: 529 PI-NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
P+ N+E + ++ ++++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++
Sbjct: 316 PLFNRESK--VVIGGDYITTESGTGLVHTAPGHGQEDYIVGQKYGLPILSPVDDKGYFTE 373
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
+AG GLN+L G + ++ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 374 EAGK-FAGLNVLNGGNEAIIEALKDAGSLLKEEPYQHKYPYDWRTKKPTIFRATEQWFAS 432
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
E + EAL + V ++P + + +A+R WCISRQR WGVPIPVFYD +T +
Sbjct: 433 VEGFREEALKAISSVQWIPAQGENRITPMVAERSDWCISRQRSWGVPIPVFYDEETNEPL 492
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSH 761
+ E I + +I G D WW L VE+LL K D +D+WFDSG SW+
Sbjct: 493 LTEETINYVQRIIAAKGSDAWWELPVEELLPEQYRSNGRKYRKGTDTMDVWFDSGSSWAA 552
Query: 762 VLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
V K + P +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG KMSK
Sbjct: 553 VAKARNLKYPVDMYLEGSDQHRGWFQSSLLTSVATNGIAPYQTVLTHGFVLDEKGRKMSK 612
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNV+ I +G GN K+ P YG DVLR WV++
Sbjct: 613 SLGNVVDPKIIIEG-----------GN---------NQKQEPPYGADVLRLWVSS-VDYS 651
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
VPIG+NIL D +KIR++ R+LLG LH+ + T +++ +D YML R+ E
Sbjct: 652 SDVPIGQNILKQLGDIYRKIRNTARFLLGNLHDFNPETDAVAYADLPELDKYMLHRMTEV 711
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + FQ+ R + + NF V +LS FY + KDRLY N R S L
Sbjct: 712 FADVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISDPNSFRRRSCQTVLAIA 771
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ H+AE+++ +P S F
Sbjct: 772 VESLAKAIAPVLSHMAEDIWQSIPYETSYRSVF 804
Score = 332 bits (851), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 248/393 (63%), Gaps = 20/393 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG+ H+GHA+NKILKDI + LL+G +V YVPGWDCHGLPIELK + S
Sbjct: 53 FILHDGPPYANGSLHMGHALNKILKDIINKYKLLRGHKVKYVPGWDCHGLPIELKVLQSM 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+P+ +R KA++FAL+T Q F+ +G+ DWEH Y T +Y Q+
Sbjct: 113 KSKEREGLTPIKLRHKARDFALKTQQEQCEGFKRYGIWGDWEH-PYLTMTPDYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK---IKLNQVPAHLL 193
F + + YIYR LKPV+WSPSS TALAE+ELEY H S+S+Y I L + L
Sbjct: 172 FGQMALKGYIYRGLKPVHWSPSSHTALAEAELEYPEGHTSRSVYAAFPVISLGEDAKELE 231
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------VIVAKCLVESLKW 247
+ +L IWTTTPW++P N +A N LEY+V V + +IVAK LVE L
Sbjct: 232 QYLPNLSVAIWTTTPWTIPGNLAVAVNGDLEYAVVDVGTIHELSLQYLIVAKDLVEKLSA 291
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
T T++ V G+ L+ ITY HP+ N+E + ++ ++++ GTGLVH AP HGQ+
Sbjct: 292 TLGTNLTVKTTLLGKALEGITYRHPLFNRESK--VVIGGDYITTESGTGLVHTAPGHGQE 349
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQ 364
D+++ +P+L+ + ++G ++ +AG GLN+L G + ++ ++ +L E YQ
Sbjct: 350 DYIVGQKYGLPILSPVDDKGYFTEEAGK-FAGLNVLNGGNEAIIEALKDAGSLLKEEPYQ 408
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 409 HKYPYDWRTKKPTIFRATEQWFASVEGFREEAL 441
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 6/177 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L G + ++ ++ +L E YQH YPYDWRTKKP
Sbjct: 362 LSPVDDKGYFTEEAGK-FAGLNVLNGGNEAIIEALKDAGSLLKEEPYQHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EAL + V ++P + + +A+R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFREEALKAISSVQWIPAQGENRITPMVAERSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSNQG 1278
PVFYD +T ++ E I + +I G D WW LPVE+LL SN K +G
Sbjct: 481 PVFYDEETNEPLLTEETINYVQRIIAAKGSDAWWELPVEELL-PEQYRSNGRKYRKG 536
>gi|440683129|ref|YP_007157924.1| Isoleucyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
gi|428680248|gb|AFZ59014.1| Isoleucyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
Length = 960
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/637 (38%), Positives = 347/637 (54%), Gaps = 51/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP----AHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+S+SIY + +V A L DL +WTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHVSRSIYAAFPVVKVSEGLKASLDAFLPDLGVAVWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN---------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDI 524
+A N ALEY+V V + +IVA LVE L +++ V F G+ L+
Sbjct: 256 VAVNGALEYAVVEVSRRDAEAQRGCKYLIVAAELVERLAAVLDSELTVKAKFAGKDLEGT 315
Query: 525 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
TY HP+ ++ L ++ ++++ GTGLVH AP HGQ+D+++ +P+L + + G
Sbjct: 316 TYRHPLF-DRESLVVVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDSGN 374
Query: 585 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG GLN+LGDG ++ + +L E Y H YPYDWRTKKP I +A++QW
Sbjct: 375 FTDEAGK-FAGLNVLGDGNQAIIDALSEAGSLLKEEAYPHKYPYDWRTKKPTIFRATEQW 433
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F + +AL + V ++P + + IA+R WCISRQR WGVPIPVFYD T
Sbjct: 434 FASVAGFREDALKAIASVRWIPAQGENRITPMIAERSDWCISRQRSWGVPIPVFYDDATG 493
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGIS 758
+++N I H + E G D WW LS+ +LL + N+ T + D +D+WFDSG S
Sbjct: 494 EVLLNAETINHVQAIFAEKGSDAWWELSIAELLPEAYRNNGKTYRRGTDTMDVWFDSGSS 553
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE G
Sbjct: 554 WAAVAKQRPELCYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDENGR 613
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKSVGNV+ + QG K+ PAYG DVLR WV++
Sbjct: 614 KMSKSVGNVVDPQLMIQGGSN--------------------QKQQPAYGADVLRLWVSS- 652
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKR 929
V +G NI+ D KIR++ R+LLG LH+ +++ +D YML R
Sbjct: 653 VDYSGDVRLGNNIIKQLADVRNKIRNTARFLLGSLHDFDPQKDAVAFADLPDLDKYMLHR 712
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E N + + FQ+ R + + NF V +LS FY + KDRLY S + R S
Sbjct: 713 IREVFNEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYISSTDAFRRRSCQTV 772
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L L R +AP++ H AE+++ +P + S F
Sbjct: 773 LQIALENLARAIAPVLCHTAEDIWQFIPYKTAYKSVF 809
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/396 (44%), Positives = 250/396 (63%), Gaps = 22/396 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI R +LLQG+++ YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGQLHIGHALNKILKDIINRYHLLQGRKIRYVPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++ + L+PL +R+KAK+FAL+T++ Q+ F+ +G+ DWE N Y T EY Q+
Sbjct: 113 KQAERQNLTPLQLRQKAKDFALKTVDEQRESFKRYGIWGDWE-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP----AHL 192
F ++ + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SIY + +V A L
Sbjct: 172 FGEMFLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVVKVSEGLKASL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---------VIVAKCLVE 243
DL +WTTTPW++P N +A N ALEY+V V + +IVA LVE
Sbjct: 232 DAFLPDLGVAVWTTTPWTIPGNLAVAVNGALEYAVVEVSRRDAEAQRGCKYLIVAAELVE 291
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L +++ V F G+ L+ TY HP+ ++ L ++ ++++ GTGLVH AP H
Sbjct: 292 RLAAVLDSELTVKAKFAGKDLEGTTYRHPLF-DRESLVVVGGDYITTESGTGLVHTAPGH 350
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTE 361
GQ+D+++ +P+L + + G ++ +AG GLN+LGDG ++ + +L E
Sbjct: 351 GQEDYIVGQRYGLPILAPVDDSGNFTDEAGK-FAGLNVLGDGNQAIIDALSEAGSLLKEE 409
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YPYDWRTKKP I +A++QWF + +AL
Sbjct: 410 AYPHKYPYDWRTKKPTIFRATEQWFASVAGFREDAL 445
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LG+G ++ + +L E Y H YPYDWRTKKP I
Sbjct: 369 VDDSGNFTDEAGK-FAGLNVLGDGNQAIIDALSEAGSLLKEEAYPHKYPYDWRTKKPTIF 427
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + +AL + V ++P + + IA+R WCISRQR WGVPIPVF
Sbjct: 428 RATEQWFASVAGFREDALKAIASVRWIPAQGENRITPMIAERSDWCISRQRSWGVPIPVF 487
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
YD T +++N I H + E G D WW L + +LL + N+ T
Sbjct: 488 YDDATGEVLLNAETINHVQAIFAEKGSDAWWELSIAELLPEAYRNNGKT 536
>gi|172039458|ref|YP_001805959.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|254782384|sp|B1WVA3.1|SYI_CYAA5 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|171700912|gb|ACB53893.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
Length = 959
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/625 (38%), Positives = 348/625 (55%), Gaps = 49/625 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SI+ IK ++ +L+ + L IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSRSIFAAFPIIKASKDTEEILQPFLNKLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVASVKG-----ANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V +IVA LVE L TF+T++ V PG+ L+ Y H
Sbjct: 256 VALNPDLNYAVVEQNSDVCNYQYLIVAADLVERLSTTFETELTVKATLPGKALEHTIYRH 315
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ L+ +V++ GTGLVH AP HGQ+D+++ + +L+ + +G ++ +
Sbjct: 316 PLYDRESEI-LIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLGILSPVDAKGNFTEE 374
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
A GLN+L D + +++ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 375 ARQ-FAGLNVLKDANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKPTIFRATEQWFASV 433
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
+ + AL ++ V ++P + + ++ R WCISRQR WG+PIPVFYD +T ++
Sbjct: 434 KGFRDAALTAIKTVQWIPAQGENRITPMVSDRSDWCISRQRSWGLPIPVFYDEETNEPLL 493
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLL---NTSDVNSNVTKSNDILDIWFDSGISWSH 761
E IKH T+ E G D WW +S+E LL +D + K D +D+WFDSG SW+
Sbjct: 494 TEETIKHIQTIFAEKGSDAWWEMSIEALLPDQYKADAH-KYRKGTDTMDVWFDSGSSWAS 552
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMS
Sbjct: 553 VAKQRPELKYPADIYLEGSDQHRGWFQSSLLTSVAVNEIAPYKTVLTHGFVLDEKGHKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN++ + I G K K+ P YG DVLR WV++
Sbjct: 613 KSLGNIVDPNVIINGGK--------------------NQKQEPPYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
VPIGK IL D +KIR++ R+LLG LH+ ++S +D YML R+ E
Sbjct: 652 SSDVPIGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKKDTVSYEELPELDRYMLHRITE 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + +Q+ R + + NF V +LS FY + KDRLY R S L
Sbjct: 712 VFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISHPESIRRRSCQTVLAI 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
L + +AP++ H+AE+++ LP
Sbjct: 772 AIENLAKAIAPVLCHMAEDIWQFLP 796
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 249/403 (61%), Gaps = 19/403 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N + F+LHDGPPYANG+ H+GHA+NK LKDI + LL+G +V YVPGWDCHGLPIELK
Sbjct: 48 NPEEVFVLHDGPPYANGSLHMGHALNKTLKDIINKYKLLRGYKVRYVPGWDCHGLPIELK 107
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + + L+PL +R KA++FAL+T Q F+ +GV DWE N Y T EY
Sbjct: 108 VLQSMKSKEREGLTPLKLRHKARDFALKTQEEQAKGFKRFGVWGDWE-NPYLTLTPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK---IKLNQV 188
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SI+ IK ++
Sbjct: 167 AQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIFAAFPIIKASKD 226
Query: 189 PAHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-----ANVIVAKCLV 242
+L+ + L IWTTTPW+LP N +A NP L Y+V +IVA LV
Sbjct: 227 TEEILQPFLNKLGVAIWTTTPWTLPGNLAVALNPDLNYAVVEQNSDVCNYQYLIVAADLV 286
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
E L TF+T++ V PG+ L+ Y HP+ + ++ L+ +V++ GTGLVH AP
Sbjct: 287 ERLSTTFETELTVKATLPGKALEHTIYRHPLYDRESEI-LIGGDYVTTESGTGLVHTAPG 345
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWT 360
HGQ+D+++ + +L+ + +G ++ +A GLN+L D + +++ ++ +L
Sbjct: 346 HGQEDYMVGQRYGLGILSPVDAKGNFTEEARQ-FAGLNVLKDANEVIINELKEKGSLLKE 404
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC-KTV 402
E YQH YPYDWRTKKP I +A++QWF + + AL KTV
Sbjct: 405 EAYQHKYPYDWRTKKPTIFRATEQWFASVKGFRDAALTAIKTV 447
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + +G ++ +A GLN+L + + +++ ++ +L E YQH YPYDWRTKKP
Sbjct: 362 LSPVDAKGNFTEEARQ-FAGLNVLKDANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF + + AL ++ V ++P + + ++ R WCISRQR WG+PI
Sbjct: 421 TIFRATEQWFASVKGFRDAALTAIKTVQWIPAQGENRITPMVSDRSDWCISRQRSWGLPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E IKH T+ E G D WW + +E LL
Sbjct: 481 PVFYDEETNEPLLTEETIKHIQTIFAEKGSDAWWEMSIEALL 522
>gi|56751678|ref|YP_172379.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|81301246|ref|YP_401454.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
gi|81820600|sp|Q5N1G1.1|SYI_SYNP6 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|56686637|dbj|BAD79859.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|81170127|gb|ABB58467.1| Isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
Length = 954
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/635 (38%), Positives = 345/635 (54%), Gaps = 40/635 (6%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H S+SIY+ ++L++ LL +L IWTTTPW++PAN +
Sbjct: 196 TALAEAELEYPDGHTSRSIYVAMPIVQLSEAAQPLLGNYANLALAIWTTTPWTIPANLAV 255
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
A N L Y+V ++IVA L E+L TF T++ V+ FPG L+ Y HP+ +
Sbjct: 256 AVNGELTYAVVQAGDCHLIVAAELAESLSKTFATELTVLATFPGSVLEHSRYRHPLYDRE 315
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+ ++ ++++ GTGLVH AP HGQDDF++ + V + ++G ++ G L
Sbjct: 316 SPV-VIGGDYITTESGTGLVHTAPGHGQDDFIVGNRYGLEVFCPVDDKGDFTAAVGDRLV 374
Query: 595 GLNILGDGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G N+L D V+ L E L E +Y H YPYDWRTKKP I +A++QWF E + +
Sbjct: 375 GKNVLKDANAAVIEWLTEVGALLKEESYAHRYPYDWRTKKPTIFRATEQWFASVEGFREQ 434
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIK 710
AL + EV+++P + + +++R WCISRQR WGVPIPVFYD ++ ++N I
Sbjct: 435 ALQAIAEVDWIPAQGENRITSMVSERSDWCISRQRTWGVPIPVFYDEESGEALLNAETIA 494
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNT--SDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
H ++ E G D WW L V LL K D +D+WFDSG SW+ V +
Sbjct: 495 HVRAIVAERGSDAWWELDVADLLPEPYRSNGRRYRKGTDTMDVWFDSGSSWAAVASQREG 554
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSLLTSVA AP+R V HGF +DEKG KMSKS+GNV+
Sbjct: 555 LHYPADLYLEGSDQHRGWFQSSLLTSVACNGHAPYRRVLTHGFALDEKGRKMSKSLGNVV 614
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ G K K+ P YG DVLR WV++ VPIG
Sbjct: 615 DPAIVINGGKD--------------------QKQEPPYGADVLRLWVSS-VDYSSDVPIG 653
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
KNIL D +KIR++ R+LLG LH+ + ++ +D Y+L RL E +
Sbjct: 654 KNILKQMADVYRKIRNTARFLLGNLHDFDPAKDALPWEKLPELDRYLLHRLREVILEIQD 713
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
+ FQ+ R + + NF V +LS FY + KDRLY + + R S L L
Sbjct: 714 AFESFQFFRFFQTVQNFCVVDLSNFYLDIGKDRLYISAPDSLRRRSCQTVLAICVEALAT 773
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQ 1034
+AP++ H+AE+++ LP T S F V LQ
Sbjct: 774 AIAPVLSHMAEDIWQSLPYPARTKSVFQAGWVQLQ 808
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/390 (45%), Positives = 242/390 (62%), Gaps = 12/390 (3%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G P F+LHDGPPYANG H+GHA+NK LKDI + LLQG++V YVPGWDCHGLPIELK
Sbjct: 50 GAP-FVLHDGPPYANGALHMGHALNKTLKDIINKYQLLQGRKVRYVPGWDCHGLPIELKV 108
Query: 77 I----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKN 132
+ + + + L+PL +R+KAK +AL + Q F+ +GV ADW+ Y T EY
Sbjct: 109 LQELSSEERRNLTPLTLRQKAKAYALAQVEQQSQSFQRYGVWADWDAP-YLTLTPEYEAA 167
Query: 133 QLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK---IKLNQVP 189
Q+ F + + YIYR LKPV+WSPSSRTALAE+ELEY H S+SIY+ ++L++
Sbjct: 168 QIDVFGQMVLKGYIYRGLKPVHWSPSSRTALAEAELEYPDGHTSRSIYVAMPIVQLSEAA 227
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTF 249
LL +L IWTTTPW++PAN +A N L Y+V ++IVA L ESL TF
Sbjct: 228 QPLLGNYANLALAIWTTTPWTIPANLAVAVNGELTYAVVQAGDCHLIVAAELAESLSKTF 287
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
T++ V+ FPG L+ Y HP+ + + ++ ++++ GTGLVH AP HGQDDF+
Sbjct: 288 ATELTVLATFPGSVLEHSRYRHPLYDRESPV-VIGGDYITTESGTGLVHTAPGHGQDDFI 346
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-ENYQHSY 367
+ + V + ++G ++ G L G N+L D V+ L E L E+Y H Y
Sbjct: 347 VGNRYGLEVFCPVDDKGDFTAAVGDRLVGKNVLKDANAAVIEWLTEVGALLKEESYAHRY 406
Query: 368 PYDWRTKKPVILKASQQWFIDTERIKPEAL 397
PYDWRTKKP I +A++QWF E + +AL
Sbjct: 407 PYDWRTKKPTIFRATEQWFASVEGFREQAL 436
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVIL 1166
+ ++G ++ G L G N+L + V+ L E L E +Y H YPYDWRTKKP I
Sbjct: 359 VDDKGDFTAAVGDRLVGKNVLKDANAAVIEWLTEVGALLKEESYAHRYPYDWRTKKPTIF 418
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL + V+++P + + +++R WCISRQR WGVPIPVF
Sbjct: 419 RATEQWFASVEGFREQALQAIAEVDWIPAQGENRITSMVSERSDWCISRQRTWGVPIPVF 478
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD ++ ++N I H ++ E G D WW L V LL
Sbjct: 479 YDEESGEALLNAETIAHVRAIVAERGSDAWWELDVADLL 517
>gi|425446771|ref|ZP_18826770.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
gi|389732843|emb|CCI03274.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
Length = 952
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/626 (39%), Positives = 346/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L TF T + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LDAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPLKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/403 (46%), Positives = 248/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLKPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L TF T + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALDAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|425453588|ref|ZP_18833345.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
gi|389801435|emb|CCI19402.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
Length = 952
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/626 (39%), Positives = 346/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L TF T + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LDAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPLSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIISGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPLKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/403 (46%), Positives = 248/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLKPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L TF T + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALDAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|75909978|ref|YP_324274.1| isoleucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
gi|75703703|gb|ABA23379.1| Isoleucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 978
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/637 (38%), Positives = 347/637 (54%), Gaps = 51/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN----QVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY + V + L E DL IWTTTPW++P N
Sbjct: 214 TALAEAELEYPEGHTSRSIYAAFPVTGLAEAVKSVLGEYLPDLGVAIWTTTPWTIPGNLA 273
Query: 474 IAFNPALEYSVASVKGANV---------IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDI 524
+A N L Y+V V +V IVA LVE L T + V F G+ L+
Sbjct: 274 VAVNGDLNYAVVEVAQIDVETQSNFKYLIVAAELVERLAATISAQLTVKATFKGKELEHT 333
Query: 525 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
TY HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ L +P+L + + G
Sbjct: 334 TYRHPLFDRESPV-VVGGDYITTESGTGLVHTAPGHGQEDYVVGLRYGLPILAPVDDNGD 392
Query: 585 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG GLN+LGDG V+ + +L E Y H YPYDWRTKKP I +A++QW
Sbjct: 393 FTQEAGE-FAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIFRATEQW 451
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F E + EAL + V ++P + + +A+R WCISRQR WGVPIPVFYD +T
Sbjct: 452 FASVEGFRDEALKAIATVKWIPAQGENRITPMVAERSDWCISRQRSWGVPIPVFYDEETG 511
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGIS 758
++NE I + +I E G D WW LSVE+LL S N+ + + D +D+WFDSG S
Sbjct: 512 EPLLNEETINYVQAIIAEKGSDAWWELSVEELLPESYRNNGRSYRRGTDTMDVWFDSGSS 571
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V+K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE+G
Sbjct: 572 WASVVKQRPELRYPADMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEQGR 631
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS GNV+ + G K KK P YG DV+R W A+
Sbjct: 632 KMSKSEGNVVDPKILISGGKD--------------------QKKEPPYGADVMRLW-ASS 670
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
V +G NI+ D KIR++ R+LLG LH+ ++ +D YML R
Sbjct: 671 VDYTGDVRLGGNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKNAVQFEEMPQLDRYMLHR 730
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E + + FQ+ R + + NF V +LS FY + KDRLY + + R S
Sbjct: 731 IREVFQEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYISAPDAFRRRSCQTV 790
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+H L R +AP++ H AE+++ +LP + S F
Sbjct: 791 IHIALQNLARAIAPVLCHTAEDIWQYLPYKTPYKSVF 827
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/396 (45%), Positives = 245/396 (61%), Gaps = 22/396 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R LLQG++V YVPGWDCHGLPIELK +
Sbjct: 71 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNL 130
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ + L+PL +R+KAK FAL T++ Q+ F+ +GV DW+H Y T EY Q+
Sbjct: 131 KSAERQNLTPLQLRQKAKEFALATVDDQRQNFKRYGVWGDWDH-PYLTLKPEYEAAQIGV 189
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN----QVPAHL 192
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY + V + L
Sbjct: 190 FGQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTGLAEAVKSVL 249
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV---------IVAKCLVE 243
E DL IWTTTPW++P N +A N L Y+V V +V IVA LVE
Sbjct: 250 GEYLPDLGVAIWTTTPWTIPGNLAVAVNGDLNYAVVEVAQIDVETQSNFKYLIVAAELVE 309
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L T + V F G+ L+ TY HP+ + + ++ ++++ GTGLVH AP H
Sbjct: 310 RLAATISAQLTVKATFKGKELEHTTYRHPLFDRESPV-VVGGDYITTESGTGLVHTAPGH 368
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTE 361
GQ+D+++ L +P+L + + G ++ +AG GLN+LGDG V+ + +L E
Sbjct: 369 GQEDYVVGLRYGLPILAPVDDNGDFTQEAGE-FAGLNVLGDGNQAVIDALTAAGSLLKEE 427
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 428 AYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 463
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 5/166 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I
Sbjct: 387 VDDNGDFTQEAGE-FAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIF 445
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P + + +A+R WCISRQR WGVPIPVF
Sbjct: 446 RATEQWFASVEGFRDEALKAIATVKWIPAQGENRITPMVAERSDWCISRQRSWGVPIPVF 505
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
YD +T ++NE I + +I E G D WW L VE+LL S N+
Sbjct: 506 YDEETGEPLLNEETINYVQAIIAEKGSDAWWELSVEELLPESYRNN 551
>gi|425467689|ref|ZP_18846968.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
gi|389829462|emb|CCI29178.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
Length = 952
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/626 (39%), Positives = 345/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L TF + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + +QG ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDQGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPLKDAVAYEELPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/403 (46%), Positives = 247/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L TF + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + +QG ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDQGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + +QG ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDQGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|443322252|ref|ZP_21051279.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
gi|442788042|gb|ELR97748.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
Length = 948
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/632 (38%), Positives = 342/632 (54%), Gaps = 47/632 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAH----LLEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEY H S SIY + + A L+ A DL IWTTTPW++P N
Sbjct: 195 GTALAEAELEYPEGHTSLSIYAAFPVVALSAQAEKILVPFAEDLGVAIWTTTPWTIPGNL 254
Query: 473 FIAFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A N L Y++AS GA +IVA LV L +T++ +V G L+ Y H
Sbjct: 255 AVAVNAELTYAIAS--GAKTHRYIIVAADLVPRLSQILETNLTIVATIKGADLEHCRYRH 312
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+L+ + +QG ++ +
Sbjct: 313 PLFDRESSI-VIGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDQGNFTAE 371
Query: 589 AGPGLEGLNILGDGKDQVLH-LVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GLN+L D ++ L E L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 372 AG-AFAGLNVLKDANSAIIAALAEAGSLLKEEPYVHKYPYDWRTKKPTIFRATEQWFASV 430
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IV 704
E + +AL + V ++P + + +A+R WCISRQR WGVPIPVFYD +T ++
Sbjct: 431 EGFRTDALEAIASVTWIPSQGQNRITPMVAERSDWCISRQRSWGVPIPVFYDIETSEPLL 490
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNT--SDVNSNVTKSNDILDIWFDSGISWSHV 762
I H +I G D WW LSV +LL + K D +D+WFDSG SW+ V
Sbjct: 491 TAETIAHVQEIIAAQGSDAWWELSVAELLPEPYRIKHDRYRKGTDTMDVWFDSGSSWASV 550
Query: 763 LKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+K + P +Y+EG DQ GWF SSLLTSVA AP+R V HGFV+DEKG KMSKS
Sbjct: 551 VKHRGLKYPVDIYLEGSDQHRGWFQSSLLTSVATNGIAPYRTVLTHGFVLDEKGNKMSKS 610
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
VGNV+ I G K K+ P YG D LR WV++
Sbjct: 611 VGNVVDPLVIISGGKN--------------------QKQEPPYGADTLRLWVSS-VDYST 649
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V IG N+L D +KIR++ R+LLG L++ + ++ +D YML R E
Sbjct: 650 DVRIGNNMLQQLADVYRKIRNTARFLLGNLYDFDPKSQAVPYEELPQLDQYMLHRATEVF 709
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ + +Q+ R + + NF V +LS FY + KDRLY S+N R S + I
Sbjct: 710 TEVTEAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISSLNSHRRRSCQTVIAIIL 769
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ H+AE+++ LP T S F
Sbjct: 770 ENLAKAIAPVLSHMAEDIWQFLPYTPPTKSVF 801
Score = 318 bits (816), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 235/396 (59%), Gaps = 19/396 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG+ H+GHA+NKILKDI + LL+G + YVPGWDCHGLPIELK
Sbjct: 48 NSVGSFILHDGPPYANGSLHMGHALNKILKDIINKYKLLRGYEISYVPGWDCHGLPIELK 107
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + L+PL +R A+ FALE + Q F+ +G+ DWE N Y T Y
Sbjct: 108 VLQKMKPHERAELTPLKLRSLAREFALEAVAEQSKGFQRFGIWGDWE-NPYLTLTPAYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSS TALAE+ELEY H S SIY + + A
Sbjct: 167 AQIGVFGEMALKGYIYRGLKPVHWSPSSGTALAEAELEYPEGHTSLSIYAAFPVVALSAQ 226
Query: 192 ----LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVE 243
L+ A DL IWTTTPW++P N +A N L Y++AS GA +IVA LV
Sbjct: 227 AEKILVPFAEDLGVAIWTTTPWTIPGNLAVAVNAELTYAIAS--GAKTHRYIIVAADLVP 284
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L +T++ +V G L+ Y HP+ + + ++ ++++ GTGLVH AP H
Sbjct: 285 RLSQILETNLTIVATIKGADLEHCRYRHPLFDRESSI-VIGGDYITTESGTGLVHTAPGH 343
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL-HLVEPDVLWTEN 362
GQ+D+++ +P+L+ + +QG ++ +AG GLN+L D ++ L E L E
Sbjct: 344 GQEDYIVGQRYGLPILSPVDDQGNFTAEAG-AFAGLNVLKDANSAIIAALAEAGSLLKEE 402
Query: 363 -YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 403 PYVHKYPYDWRTKKPTIFRATEQWFASVEGFRTDAL 438
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + +QG ++ +AG GLN+L + ++ L E L E Y H YPYDWRTKKP
Sbjct: 359 LSPVDDQGNFTAEAG-AFAGLNVLKDANSAIIAALAEAGSLLKEEPYVHKYPYDWRTKKP 417
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + +AL + V ++P + + +A+R WCISRQR WGVPI
Sbjct: 418 TIFRATEQWFASVEGFRTDALEAIASVTWIPSQGQNRITPMVAERSDWCISRQRSWGVPI 477
Query: 1224 PVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ I H +I G D WW L V +LL
Sbjct: 478 PVFYDIETSEPLLTAETIAHVQEIIAAQGSDAWWELSVAELL 519
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 1005 MPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG--------SIAKRILYCDSINGEARLS 1056
M H A EV++ + ++ F F+ + IAK LY S+N R S
Sbjct: 701 MLHRATEVFTEVTEAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISSLNSHRRRS 760
Query: 1057 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
+ I L + +AP++ H+AE+++ LP T S F
Sbjct: 761 CQTVIAIILENLAKAIAPVLSHMAEDIWQFLPYTPPTKSVF 801
>gi|166363857|ref|YP_001656130.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
gi|189082327|sp|B0JSP4.1|SYI_MICAN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|166086230|dbj|BAG00938.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
Length = 952
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/626 (39%), Positives = 346/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLRPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L TF + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S N+ + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFGVKGSNAWWELSVEELLPPSYRNNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPVKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 338 bits (868), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/403 (45%), Positives = 247/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+P+ +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPVKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLRPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L TF + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
PVFYD +T ++ E I H + G + WW L VE+LL S N+
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFGVKGSNAWWELSVEELLPPSYRNN 522
>gi|425441444|ref|ZP_18821718.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
gi|389717819|emb|CCH98134.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
Length = 952
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/626 (39%), Positives = 346/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLRPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L TF + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S N+ + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRNNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPVKDAVAYEELPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 185/403 (45%), Positives = 247/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLKPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLRPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L TF + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
PVFYD +T ++ E I H + G + WW L VE+LL S N+
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELLPPSYRNN 522
>gi|390440600|ref|ZP_10228826.1| Isoleucyl-tRNA synthetase [Microcystis sp. T1-4]
gi|389836062|emb|CCI32952.1| Isoleucyl-tRNA synthetase [Microcystis sp. T1-4]
Length = 952
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/626 (39%), Positives = 345/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L TF + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPVKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 339 bits (870), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 185/403 (45%), Positives = 247/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L TF + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|443652604|ref|ZP_21130866.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
gi|159030898|emb|CAO88579.1| ileS [Microcystis aeruginosa PCC 7806]
gi|443334274|gb|ELS48795.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
Length = 952
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/626 (39%), Positives = 345/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L F T + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPVKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 339 bits (869), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 185/403 (45%), Positives = 247/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLKPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L F T + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|428205874|ref|YP_007090227.1| isoleucyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
gi|428007795|gb|AFY86358.1| Isoleucyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
Length = 978
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/650 (37%), Positives = 347/650 (53%), Gaps = 65/650 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD----LHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y + + + L IWTTTPW++PAN
Sbjct: 196 TALAEAELEYPEGHTSRSLYAAFPMTHIEPSVFPKLKSFLPHLWVAIWTTTPWTIPANLA 255
Query: 474 IAFNPALEYSV-----------------ASVKGAN---VIVAKCLVENLKWTFQTDIDVV 513
+A NP L Y+V AS++ N +IVA LVE L T + V
Sbjct: 256 VAVNPDLTYAVVEMSRKDAETQSTLSAFASLRDQNPQYLIVAADLVERLSVTLGAQLTVK 315
Query: 514 CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI 573
F G L+ Y HP+ + + ++ +V++ GTGLVH AP HGQ+D+ + + +
Sbjct: 316 ATFKGYELEHCKYRHPLCDRESPI-VIGGDYVTTESGTGLVHTAPGHGQEDYQVGMRYNL 374
Query: 574 PVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTK 631
P+L+ + G ++ +AG LN+LG+G V+ +E +L E Y H YPYDWRTK
Sbjct: 375 PILSPVDADGNFTAEAGQ-FAKLNVLGEGNAAVVQALEQAGSLLKEEPYVHKYPYDWRTK 433
Query: 632 KPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGV 691
KPVIL+A++QWF E + AL + V ++P + + +A+R WCISRQR WGV
Sbjct: 434 KPVILRATEQWFASVEGFRDAALQEIAHVRWIPAQGENRITAMVAERSDWCISRQRSWGV 493
Query: 692 PIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSND 747
PIPVFYD +T ++NE I + E G D WW +SVE+LL D K D
Sbjct: 494 PIPVFYDEETGEPLLNEETIARVQNIFAEKGSDAWWEMSVEELLPEKYRDNGRKYRKGID 553
Query: 748 ILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVF 802
+D+WFDSG SW+ VL+ + PA +Y+EG DQ GWF SSLLTSVA AP++ V
Sbjct: 554 TMDVWFDSGSSWAAVLQQRPELSYPADLYLEGSDQHRGWFQSSLLTSVATNGHAPYKTVL 613
Query: 803 LHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYG 862
HG+ VDE+G KMSKS+GN + + G K K+ P YG
Sbjct: 614 THGYTVDEQGRKMSKSLGNGVDPTVVIDGGK--------------------NQKEEPPYG 653
Query: 863 VDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR-- 920
DVLR WV++ VPI KNIL D KIR++ R+LLG LH+ S ++
Sbjct: 654 ADVLRLWVSS-VDYSADVPISKNILKQLADARNKIRNTARFLLGNLHDFDPSKDAVPYEQ 712
Query: 921 --YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSI 978
+D YML R+ E N + + ++Q+ R + + NF V +LS+FY + KDRLY +
Sbjct: 713 LPELDRYMLHRMTEVFNEVTQAFDKYQFFRFFQTVQNFCVVDLSSFYLDIAKDRLYISAA 772
Query: 979 NGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP---SRQGTFSS 1025
N R S L L + +AP++ H+AE+++ +LP S + F S
Sbjct: 773 NSFRRRSCQTVLQIALENLAKAIAPVLCHMAEDIWQYLPYPKSHESVFES 822
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/407 (42%), Positives = 238/407 (58%), Gaps = 33/407 (8%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F LHDGPPYANG+ HIGHA+NKILKDI R L QG++V + GWDCHGLPIELK I S
Sbjct: 53 FTLHDGPPYANGSLHIGHALNKILKDIINRYQLQQGRKVRCIHGWDCHGLPIELKVIQSM 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ L+PL++R KA++FAL+ + Q A + WGV+ DWE N Y T +Y Q+
Sbjct: 113 KPQERASLTPLELRHKARDFALKAMQEQCASLKRWGVIGDWE-NSYLTLKPKYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F + + Y+YR KPVYWSPSS+TALAE+ELEY H S+S+Y + + +
Sbjct: 172 FGQMVLKGYVYRGFKPVYWSPSSKTALAEAELEYPEGHTSRSLYAAFPMTHIEPSVFPKL 231
Query: 197 TD----LHALIWTTTPWSLPANQFIAFNPALEYSV-----------------ASVKGAN- 234
L IWTTTPW++PAN +A NP L Y+V AS++ N
Sbjct: 232 KSFLPHLWVAIWTTTPWTIPANLAVAVNPDLTYAVVEMSRKDAETQSTLSAFASLRDQNP 291
Query: 235 --VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
+IVA LVE L T + V F G L+ Y HP+ + + ++ +V++
Sbjct: 292 QYLIVAADLVERLSVTLGAQLTVKATFKGYELEHCKYRHPLCDRESPI-VIGGDYVTTES 350
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH AP HGQ+D+ + + +P+L+ + G ++ +AG LN+LG+G V+
Sbjct: 351 GTGLVHTAPGHGQEDYQVGMRYNLPILSPVDADGNFTAEAGQ-FAKLNVLGEGNAAVVQA 409
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+E +L E Y H YPYDWRTKKPVIL+A++QWF E + AL
Sbjct: 410 LEQAGSLLKEEPYVHKYPYDWRTKKPVILRATEQWFASVEGFRDAAL 456
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AG LN+LGEG V+ +E +L E Y H YPYDWRTKKP
Sbjct: 377 LSPVDADGNFTAEAGQ-FAKLNVLGEGNAAVVQALEQAGSLLKEEPYVHKYPYDWRTKKP 435
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VIL+A++QWF E + AL + V ++P + + +A+R WCISRQR WGVPI
Sbjct: 436 VILRATEQWFASVEGFRDAALQEIAHVRWIPAQGENRITAMVAERSDWCISRQRSWGVPI 495
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++NE I + E G D WW + VE+LL
Sbjct: 496 PVFYDEETGEPLLNEETIARVQNIFAEKGSDAWWEMSVEELL 537
>gi|427707880|ref|YP_007050257.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7107]
gi|427360385|gb|AFY43107.1| Isoleucyl-tRNA synthetase [Nostoc sp. PCC 7107]
Length = 960
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/637 (38%), Positives = 348/637 (54%), Gaps = 51/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKI---KLNQVPAHLL-EGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY L++ +L E +L +WTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFPVTGLSEAAKSVLGEYLPELGVAVWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN---------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDI 524
+A N L Y+V V + +IVA LVE L T ++ V F G+ L+
Sbjct: 256 VAVNGDLNYAVVEVSRRDAEAQRGFKYLIVAADLVERLAATISAELTVKATFKGKELEHT 315
Query: 525 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
TY HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+L + + G
Sbjct: 316 TYRHPLYDRESPV-VVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGN 374
Query: 585 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG GLN+LGDG V+ + +L E Y H YPYDWRTKKP I +A++QW
Sbjct: 375 FTEEAGQ-FAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIFRATEQW 433
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F E + EAL + V ++P + + +A+R WCISRQR WGVPIPVFYD +T
Sbjct: 434 FASVEGFRDEALKAIASVKWIPAQGENRITPMVAERSDWCISRQRAWGVPIPVFYDEETN 493
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGIS 758
++NE I + +I E G D WW LSV +LL S N+ + + D +D+WFDSG S
Sbjct: 494 EPLLNEETINYVQAIIAEKGSDAWWELSVTELLPESYRNNGRSYRRGTDTMDVWFDSGSS 553
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE+G
Sbjct: 554 WAAVAKQRPELRYPADIYLEGSDQHRGWFQSSLLTSVAVNDIAPYKTVLTHGFALDEQGR 613
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS GNV+ + I +G K K PAYG DVLR WV++
Sbjct: 614 KMSKSEGNVVDPNAIIEGGKN--------------------QKSDPAYGADVLRLWVSS- 652
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
V IGKNI+ D KIR++ R+LLG LH+ ++ +D YML R
Sbjct: 653 VDYSGDVRIGKNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKDAVPFEDLPQLDKYMLHR 712
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E + + FQ+ R + + NF V +LS FY + KDRLY + R S
Sbjct: 713 IREVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISASKSFRRRSCQTV 772
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+H L R +AP++ H AE+++ +LP + S F
Sbjct: 773 IHVALENLARAIAPVLCHTAEDIWQYLPYKTPYKSVF 809
Score = 339 bits (869), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 178/396 (44%), Positives = 246/396 (62%), Gaps = 22/396 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R LLQG++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNL 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ + L+PL +R+KAK FAL T++ Q+ F+ +GV DW+ N Y T EY Q+
Sbjct: 113 KSAERQSLTPLQLRQKAKEFALATVDDQRKNFQRYGVWGDWD-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI---KLNQVPAHLL 193
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY L++ +L
Sbjct: 172 FGQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTGLSEAAKSVL 231
Query: 194 -EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---------VIVAKCLVE 243
E +L +WTTTPW++P N +A N L Y+V V + +IVA LVE
Sbjct: 232 GEYLPELGVAVWTTTPWTIPGNLAVAVNGDLNYAVVEVSRRDAEAQRGFKYLIVAADLVE 291
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L T ++ V F G+ L+ TY HP+ + + ++ ++++ GTGLVH AP H
Sbjct: 292 RLAATISAELTVKATFKGKELEHTTYRHPLYDRESPV-VVGGDYITTESGTGLVHTAPGH 350
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTE 361
GQ+D+++ +P+L + + G ++ +AG GLN+LGDG V+ + +L E
Sbjct: 351 GQEDYIVGQRYGLPILAPVDDNGNFTEEAGQ-FAGLNVLGDGNQAVIDALTAAGSLLKEE 409
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 410 AYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 445
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 98/167 (58%), Gaps = 5/167 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I
Sbjct: 369 VDDNGNFTEEAGQ-FAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIF 427
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P + + +A+R WCISRQR WGVPIPVF
Sbjct: 428 RATEQWFASVEGFRDEALKAIASVKWIPAQGENRITPMVAERSDWCISRQRAWGVPIPVF 487
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSN 1271
YD +T ++NE I + +I E G D WW L V +LL S N+
Sbjct: 488 YDEETNEPLLNEETINYVQAIIAEKGSDAWWELSVTELLPESYRNNG 534
>gi|307153063|ref|YP_003888447.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
gi|306983291|gb|ADN15172.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
Length = 972
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/633 (38%), Positives = 346/633 (54%), Gaps = 47/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKI---KLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y K + +L+ DL IWTTTPW+LP N
Sbjct: 209 TALAEAELEYPEGHTSRSVYAVFPVTKASDTAQKVLKPYLKDLGVAIWTTTPWTLPGNLA 268
Query: 474 IAFNPALEYSVAS-----VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V K IVA LV+ L TF T + V G+ L+ TY H
Sbjct: 269 VALNPELTYAVVESGKPICKHKYFIVAADLVDKLAATFDTPLTVKATLKGKDLEHTTYRH 328
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + ++ L+ +V++ GTGLVH AP HGQ+D+++ +PVL+ + +G ++ +
Sbjct: 329 PLFDRESEI-LIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPVLSPVDEKGNFTAE 387
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GLN+L D + ++ +E +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 388 AGQ-FAGLNVLKDANEAIIKELEEKGALLKEEPYQHKYPYDWRTKKPTIFRATEQWFASV 446
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + AL ++ V ++P + + +A R WCISRQR WGVPIPVFYD +T ++
Sbjct: 447 EGFRDTALEAIKTVTWIPAQGENRITPMVADRSDWCISRQRSWGVPIPVFYDEETNEPLL 506
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSHV 762
E + + + + G D WW LSVE+LL N+ K D +D+WFDSG SW+ V
Sbjct: 507 TEETVNYVQEIFAQKGSDAWWELSVEELLPEQYRNNGRKYRKGTDTMDVWFDSGSSWAAV 566
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
K + PA +Y+EG DQ GWF SSLLTS A AP++ V HGFV+DE+G KMSK
Sbjct: 567 AKQRPELKYPADIYLEGSDQHRGWFQSSLLTSAATNGIAPYKTVLTHGFVLDEQGRKMSK 626
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S GN++ I G K KK P YG DVLR WV++
Sbjct: 627 SEGNIVDPAMIINGGKD--------------------QKKEPPYGADVLRLWVSS-VDYS 665
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
VPIG+N+L D KIR++ R+LLG LH+ +++ +D YML R+ E
Sbjct: 666 SDVPIGQNMLKQLGDIRNKIRNTARFLLGNLHDFDPEKNAVAYQDLPELDQYMLHRITEV 725
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
N + + FQ+ R +V+ NF V +LS FY + KDRLY ++ R S L
Sbjct: 726 FNEVTDAFESFQFFRFFQVVQNFCVVDLSNFYLDIAKDRLYISDVDALRRRSCQTVLAVA 785
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ HLAE+++ LP + S F
Sbjct: 786 VENLAKAIAPVLCHLAEDIWQFLPYKTPYNSVF 818
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/398 (45%), Positives = 243/398 (61%), Gaps = 19/398 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
FILHDGPPYANGT H+GHA+NKILKDI + LL+G +V YVPGWDCHGLPIELK + S
Sbjct: 66 FILHDGPPYANGTLHMGHALNKILKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQSM 125
Query: 81 DKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ L+PL +R KA++FAL T Q F+ +GV DWEH Y T +Y Q+
Sbjct: 126 KQKEREDLTPLKLRHKARDFALSTQKEQCESFKRFGVWGDWEH-PYLTLTPDYEAAQIGV 184
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI---KLNQVPAHLL 193
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S+Y K + +L
Sbjct: 185 FGEMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSVYAVFPVTKASDTAQKVL 244
Query: 194 EG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS-----VKGANVIVAKCLVESLKW 247
+ DL IWTTTPW+LP N +A NP L Y+V K IVA LV+ L
Sbjct: 245 KPYLKDLGVAIWTTTPWTLPGNLAVALNPELTYAVVESGKPICKHKYFIVAADLVDKLAA 304
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
TF T + V G+ L+ TY HP+ + ++ L+ +V++ GTGLVH AP HGQ+D
Sbjct: 305 TFDTPLTVKATLKGKDLEHTTYRHPLFDRESEI-LIGGDYVTTESGTGLVHTAPGHGQED 363
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQH 365
+++ +PVL+ + +G ++ +AG GLN+L D + ++ +E +L E YQH
Sbjct: 364 YIVGQRYGLPVLSPVDEKGNFTAEAGQ-FAGLNVLKDANEAIIKELEEKGALLKEEPYQH 422
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV 402
YPYDWRTKKP I +A++QWF E + AL KTV
Sbjct: 423 KYPYDWRTKKPTIFRATEQWFASVEGFRDTALEAIKTV 460
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + +G ++ +AG GLN+L + + ++ +E +L E YQH YPYDWRTKKP
Sbjct: 375 LSPVDEKGNFTAEAGQ-FAGLNVLKDANEAIIKELEEKGALLKEEPYQHKYPYDWRTKKP 433
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + + +A R WCISRQR WGVPI
Sbjct: 434 TIFRATEQWFASVEGFRDTALEAIKTVTWIPAQGENRITPMVADRSDWCISRQRSWGVPI 493
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E + + + + G D WW L VE+LL
Sbjct: 494 PVFYDEETNEPLLTEETVNYVQEIFAQKGSDAWWELSVEELL 535
>gi|440754805|ref|ZP_20934007.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
gi|440175011|gb|ELP54380.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
Length = 952
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/626 (39%), Positives = 345/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L TF + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPLKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 339 bits (869), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/403 (45%), Positives = 247/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L TF + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|428202541|ref|YP_007081130.1| isoleucyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
gi|427979973|gb|AFY77573.1| Isoleucyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
Length = 959
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/633 (39%), Positives = 351/633 (55%), Gaps = 47/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ + Q E T +L IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSRSIYVTFPITQAGEAAKEVLTPFIPNLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVASVKGA-----NVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V + +IVAK LVE L TF ++ V G+ L+ TY H
Sbjct: 256 VALNPDLTYAVVEADSSLCQHRYLIVAKDLVERLSKTFGVNLTVKATILGKDLEHTTYRH 315
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ ++ L+ +V++ GTGLVH AP HGQ+DF++ +P+L+ + ++G ++ +
Sbjct: 316 PLYDRLGEI-LIGGDYVTTESGTGLVHTAPGHGQEDFIVGQRYGLPILSPVDDKGNFTAE 374
Query: 589 AGPGLEGLNILGDGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDT 646
AG GLN+L D + ++ L E VL E Y H YPYDWRTKKP I +A++QWF
Sbjct: 375 AGQ-FAGLNVLKDANEAIVKELQEKGVLLKEEPYTHKYPYDWRTKKPTIFRATEQWFASV 433
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + EAL ++ V ++P + + +A R WCISRQR WGVPIPVFYD +T ++
Sbjct: 434 EGFRDEALKAIKSVKWIPAQGENRITPMVADRADWCISRQRSWGVPIPVFYDEETNEPLM 493
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN--VTKSNDILDIWFDSGISWSHV 762
E I H +I + G D WW LSVE+LL + N+ K D +D+WFDSG SW+ V
Sbjct: 494 TEETINHVREIIAQKGSDAWWELSVEELLPPTYRNNGRKYRKGMDTMDVWFDSGSSWAAV 553
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
LK + PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSK
Sbjct: 554 LKQREELKYPADMYLEGSDQHRGWFQSSLLTSVATNDIAPYKMVLTHGFVLDEQGRKMSK 613
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNV+ I +G K ++ P YG DVLR WV++
Sbjct: 614 SLGNVVDPAVIIEGGK--------------------NQQQEPPYGADVLRLWVSS-VDYS 652
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
VP+G N+L D KIR++ R+LLG L++ ++S +D YML R+ E
Sbjct: 653 ADVPLGPNLLKQLNDIRGKIRNTARFLLGNLYDFDPENHAVSYEQLPELDKYMLHRITEV 712
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + FQ+ R +V+ NF V +LS FY + KDRLY + + R S L
Sbjct: 713 FAEVTEAFETFQFFRFFQVVQNFCVVDLSNFYLDIAKDRLYISAPDSWRRRSCQTILAVA 772
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L +AP++ HLAE+++ LP + S F
Sbjct: 773 VENLAVAIAPVLCHLAEDIWQFLPYKTPYKSVF 805
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/392 (46%), Positives = 246/392 (62%), Gaps = 18/392 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK---AI 77
F+LHDGPPYANG H+GHA+NKILKDI + LL+G +V YVPGWDCHGLPIELK A+
Sbjct: 53 FVLHDGPPYANGDLHMGHALNKILKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQAM 112
Query: 78 TSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
S+++ L+PL +R+KA++FAL+T Q F+ +GV DWEH Y T +Y Q+
Sbjct: 113 KSEEREGLTPLKLRRKARDFALKTQKEQCEGFKRYGVWGDWEH-PYLTLTPDYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY+ + Q E
Sbjct: 172 FGQMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIYVTFPITQAGEAAKEVL 231
Query: 197 T----DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA-----NVIVAKCLVESLKW 247
T +L IWTTTPW+LP N +A NP L Y+V + +IVAK LVE L
Sbjct: 232 TPFIPNLGVAIWTTTPWTLPGNLAVALNPDLTYAVVEADSSLCQHRYLIVAKDLVERLSK 291
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
TF ++ V G+ L+ TY HP+ ++ L+ +V++ GTGLVH AP HGQ+D
Sbjct: 292 TFGVNLTVKATILGKDLEHTTYRHPLYDRLGEI-LIGGDYVTTESGTGLVHTAPGHGQED 350
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL-HLVEPDVLWTEN-YQH 365
F++ +P+L+ + ++G ++ +AG GLN+L D + ++ L E VL E Y H
Sbjct: 351 FIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIVKELQEKGVLLKEEPYTH 409
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 410 KYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 441
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 105/178 (58%), Gaps = 6/178 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + ++ L E VL E Y H YPYDWRTKKP
Sbjct: 362 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIVKELQEKGVLLKEEPYTHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EAL ++ V ++P + + +A R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDEALKAIKSVKWIPAQGENRITPMVADRADWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSNQGL 1279
PVFYD +T ++ E I H +I + G D WW L VE+LL + N N K +G+
Sbjct: 481 PVFYDEETNEPLMTEETINHVREIIAQKGSDAWWELSVEELLPPTYRN-NGRKYRKGM 537
>gi|115449027|ref|NP_001048293.1| Os02g0778200 [Oryza sativa Japonica Group]
gi|46805524|dbj|BAD16975.1| putative isoleucyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|113537824|dbj|BAF10207.1| Os02g0778200 [Oryza sativa Japonica Group]
gi|222623772|gb|EEE57904.1| hypothetical protein OsJ_08590 [Oryza sativa Japonica Group]
Length = 1058
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/643 (37%), Positives = 349/643 (54%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQV--PAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY +HISKS+Y K+ + P L E +L IWTTTPW++PAN +A
Sbjct: 259 TALAEAELEYSENHISKSMYAAFKITNLSKPGLLEEFLPNLCLAIWTTTPWTIPANAAVA 318
Query: 476 FNPALEYSVA---------SVKGAN----------------VIVAKCLVENLKWTFQTDI 510
NP L Y V S G N +IVA LV L+ + T +
Sbjct: 319 VNPELTYVVVELQSVLESESTSGGNQRKLGSILSPGSQKPFIIVAADLVSALESKWGTKL 378
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 570
+ FPG L+ YIHP+N + + +L ++++ GTGLVH AP HGQ+D++ L
Sbjct: 379 IIQKSFPGSALEHCRYIHPVNGNECSV-VLGGDYITTESGTGLVHTAPGHGQEDYITGLK 437
Query: 571 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDW 628
+P+++ + ++G ++ +AG GL++LG G V++ ++ ++ E Y+H YPYDW
Sbjct: 438 YGLPIVSPVDDEGNFTAEAGQ-FSGLSVLGAGNAAVVNYLDEQCSLILEEPYKHKYPYDW 496
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
R+K+P I +A++QWF + + A+ + V+++P A+ + + R WCISRQR
Sbjct: 497 RSKEPTIFRATEQWFASVDGFRNAAMDAIRRVSWIPSQAENRIVAMTSSRSDWCISRQRT 556
Query: 689 WGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTK 744
WGVPIPVFY D + ++ E I+H ++ + G D WW +++E+LL D S K
Sbjct: 557 WGVPIPVFYHVDSNEPLITEETIEHIKGIVSKKGSDAWWYMTIEELLPEKYRDKASEYRK 616
Query: 745 SNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFR 799
D +D+WFDSG SW+ VL + PA +Y+EG DQ GWF SSLLTS+A AP+
Sbjct: 617 GTDTMDVWFDSGSSWAAVLAQRDGLNFPADIYLEGSDQHRGWFQSSLLTSIATTGKAPYS 676
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+V HGFV+DEKG KMSKS+GNV+ + G K +K+ P
Sbjct: 677 SVITHGFVLDEKGFKMSKSLGNVVDPEKVIVGGKN--------------------SKQEP 716
Query: 860 AYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS 919
YG DVLR WV++ V +G IL D +K+R ++R+LL LH+
Sbjct: 717 GYGADVLRLWVSS-VDYTGDVLVGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENS--V 773
Query: 920 RY-----VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
RY +D Y L +L +M Y +Q+ + ++L F + +LS FY + KDRLY
Sbjct: 774 RYSDLPKIDKYALFQLENVVTSMKDSYENYQFYKIYQILQRFAIVDLSNFYLDVAKDRLY 833
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
R S L L+R +APIMPHLAE+V+ +LP
Sbjct: 834 VGGRVSFTRKSCQTVLSAHLLYLVRAIAPIMPHLAEDVWQNLP 876
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 249/415 (60%), Gaps = 36/415 (8%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F+LHDGPPYANG H+GHA+NKILKDI R LLQ +V ++PGWDCHGLPIELK
Sbjct: 111 NTGATFVLHDGPPYANGDLHMGHALNKILKDIINRYKLLQNHKVSFIPGWDCHGLPIELK 170
Query: 76 AITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S DK L+P+ +R+KA FA T+ TQ F+ +GV ADW+ N Y T EY
Sbjct: 171 VLKSLDKETLNALTPIKLRQKAAKFAKATVTTQMNSFKRFGVWADWD-NPYLTLSPEYEA 229
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV--P 189
QL F + + YIYR KPV+WSPSSRTALAE+ELEY +H+SKS+Y K+ + P
Sbjct: 230 AQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAEAELEYSENHISKSMYAAFKITNLSKP 289
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA---------SVKGAN------ 234
L E +L IWTTTPW++PAN +A NP L Y V S G N
Sbjct: 290 GLLEEFLPNLCLAIWTTTPWTIPANAAVAVNPELTYVVVELQSVLESESTSGGNQRKLGS 349
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
+IVA LV +L+ + T + + FPG L+ YIHP+N + + +L
Sbjct: 350 ILSPGSQKPFIIVAADLVSALESKWGTKLIIQKSFPGSALEHCRYIHPVNGNECSV-VLG 408
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGD 344
++++ GTGLVH AP HGQ+D++ L +P+++ + ++G ++ +AG GL++LG
Sbjct: 409 GDYITTESGTGLVHTAPGHGQEDYITGLKYGLPIVSPVDDEGNFTAEAGQ-FSGLSVLGA 467
Query: 345 GKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
G V++ ++ ++ E Y+H YPYDWR+K+P I +A++QWF + + A+
Sbjct: 468 GNAAVVNYLDEQCSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRNAAM 522
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +AG GL++LG G V++ ++ ++ E Y+H YPYDWR+K+P I
Sbjct: 446 VDDEGNFTAEAGQ-FSGLSVLGAGNAAVVNYLDEQCSLILEEPYKHKYPYDWRSKEPTIF 504
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + A+ + V+++P A+ + + R WCISRQR WGVPIPVF
Sbjct: 505 RATEQWFASVDGFRNAAMDAIRRVSWIPSQAENRIVAMTSSRSDWCISRQRTWGVPIPVF 564
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D + ++ E I+H ++ + G D WW + +E+LL
Sbjct: 565 YHVDSNEPLITEETIEHIKGIVSKKGSDAWWYMTIEELL 603
>gi|425460311|ref|ZP_18839792.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
gi|389827009|emb|CCI22052.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
Length = 952
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/626 (39%), Positives = 345/626 (55%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L F T + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LDAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPLKDAVAYEELPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 339 bits (869), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/403 (45%), Positives = 247/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L F T + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALDAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|218191678|gb|EEC74105.1| hypothetical protein OsI_09155 [Oryza sativa Indica Group]
Length = 1058
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/643 (37%), Positives = 349/643 (54%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQV--PAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY +HISKS+Y K+ + P L E +L IWTTTPW++PAN +A
Sbjct: 259 TALAEAELEYSENHISKSMYAAFKITNLSKPGLLEEFLPNLCLAIWTTTPWTIPANAAVA 318
Query: 476 FNPALEYSVA---------SVKGAN----------------VIVAKCLVENLKWTFQTDI 510
NP L Y V S G N +IVA LV L+ + T +
Sbjct: 319 VNPELTYVVVELQSVLESESTSGGNQRKLGSILSPGSQKPFIIVAADLVSALESKWGTKL 378
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 570
+ FPG L+ YIHP+N + + +L ++++ GTGLVH AP HGQ+D++ L
Sbjct: 379 IIQKSFPGSALEHCRYIHPVNGNECSV-VLGGDYITTESGTGLVHTAPGHGQEDYITGLK 437
Query: 571 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDW 628
+P+++ + ++G ++ +AG GL++LG G V++ ++ ++ E Y+H YPYDW
Sbjct: 438 YGLPIVSPVDDEGNFTAEAGQ-FSGLSVLGAGNAAVVNYLDEQCSLILEEPYKHKYPYDW 496
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
R+K+P I +A++QWF + + A+ + V+++P A+ + + R WCISRQR
Sbjct: 497 RSKEPTIFRATEQWFASVDGFRNAAMDAIRRVSWIPSQAENRIVAMTSSRSDWCISRQRT 556
Query: 689 WGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTK 744
WGVPIPVFY D + ++ E I+H ++ + G D WW +++E+LL D S K
Sbjct: 557 WGVPIPVFYHVDSNEPLITEETIEHIKGIVSKKGSDAWWYMTIEELLPEKYRDKASEYRK 616
Query: 745 SNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFR 799
D +D+WFDSG SW+ VL + PA +Y+EG DQ GWF SSLLTS+A AP+
Sbjct: 617 GTDTMDVWFDSGSSWAAVLAKRDGLNFPADIYLEGSDQHRGWFQSSLLTSIATTGKAPYS 676
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+V HGFV+DEKG KMSKS+GNV+ + G K +K+ P
Sbjct: 677 SVITHGFVLDEKGFKMSKSLGNVVDPEKVIVGGKN--------------------SKQEP 716
Query: 860 AYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS 919
YG DVLR WV++ V +G IL D +K+R ++R+LL LH+
Sbjct: 717 GYGADVLRLWVSS-VDYTGDVLVGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENS--V 773
Query: 920 RY-----VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
RY +D Y L +L +M Y +Q+ + ++L F + +LS FY + KDRLY
Sbjct: 774 RYSDLPKIDKYALFQLENVVTSMKDSYENYQFYKIYQILQRFAIVDLSNFYLDVAKDRLY 833
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
R S L L+R +APIMPHLAE+V+ +LP
Sbjct: 834 VGGRVSFTRKSCQTVLSAHLLYLVRAIAPIMPHLAEDVWQNLP 876
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 249/415 (60%), Gaps = 36/415 (8%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F+LHDGPPYANG H+GHA+NKILKDI R LLQ +V ++PGWDCHGLPIELK
Sbjct: 111 NTGATFVLHDGPPYANGDLHMGHALNKILKDIINRYKLLQNHKVSFIPGWDCHGLPIELK 170
Query: 76 AITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S DK L+P+ +R+KA FA T+ TQ F+ +GV ADW+ N Y T EY
Sbjct: 171 VLKSLDKETLNALTPIKLRQKAAKFAKATVTTQMNSFKRFGVWADWD-NPYLTLSPEYEA 229
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV--P 189
QL F + + YIYR KPV+WSPSSRTALAE+ELEY +H+SKS+Y K+ + P
Sbjct: 230 AQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAEAELEYSENHISKSMYAAFKITNLSKP 289
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA---------SVKGAN------ 234
L E +L IWTTTPW++PAN +A NP L Y V S G N
Sbjct: 290 GLLEEFLPNLCLAIWTTTPWTIPANAAVAVNPELTYVVVELQSVLESESTSGGNQRKLGS 349
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
+IVA LV +L+ + T + + FPG L+ YIHP+N + + +L
Sbjct: 350 ILSPGSQKPFIIVAADLVSALESKWGTKLIIQKSFPGSALEHCRYIHPVNGNECSV-VLG 408
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGD 344
++++ GTGLVH AP HGQ+D++ L +P+++ + ++G ++ +AG GL++LG
Sbjct: 409 GDYITTESGTGLVHTAPGHGQEDYITGLKYGLPIVSPVDDEGNFTAEAGQ-FSGLSVLGA 467
Query: 345 GKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
G V++ ++ ++ E Y+H YPYDWR+K+P I +A++QWF + + A+
Sbjct: 468 GNAAVVNYLDEQCSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRNAAM 522
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +AG GL++LG G V++ ++ ++ E Y+H YPYDWR+K+P I
Sbjct: 446 VDDEGNFTAEAGQ-FSGLSVLGAGNAAVVNYLDEQCSLILEEPYKHKYPYDWRSKEPTIF 504
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + A+ + V+++P A+ + + R WCISRQR WGVPIPVF
Sbjct: 505 RATEQWFASVDGFRNAAMDAIRRVSWIPSQAENRIVAMTSSRSDWCISRQRTWGVPIPVF 564
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D + ++ E I+H ++ + G D WW + +E+LL
Sbjct: 565 YHVDSNEPLITEETIEHIKGIVSKKGSDAWWYMTIEELL 603
>gi|145345247|ref|XP_001417128.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577355|gb|ABO95421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 949
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/625 (38%), Positives = 356/625 (56%), Gaps = 54/625 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH-------LLEGATDLHALIWTTTPWSLPA 470
TALAE+ELEY H+S+SIY++ ++ VP LL+GA+ +WTTTPW++PA
Sbjct: 177 TALAEAELEYPEGHVSQSIYVQFPVSDVPESTPSELKALLDGAS---LAVWTTTPWTMPA 233
Query: 471 NQFIAFNPALEYSVASVK--GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
N +A N L+YSV V+ GA ++VA+ L E + +T + + F GQ +++ Y H
Sbjct: 234 NAAVAVNAKLDYSVCRVESTGATLVVAEGLREAVASKLETTLTTLGTFKGQDFENVQYQH 293
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P E++ ++ ++++ GTGLVH AP HGQDD++ + +P+ + + N G ++ +
Sbjct: 294 PFY-ERKSPVIIGGEYITTEAGTGLVHTAPGHGQDDYISGMKYGLPLYSPVDNAGLFTAE 352
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AG LEG ++LGDG + + +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 353 AGSDLEGKDVLGDGNVLCIEKLTSAGALLKQEAYNHKYPYDWRTKKPTIFRATEQWFASV 412
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
E + +AL+ L+++ F+PES K +R ++ R WCISRQR WGVPIP FY DT +++
Sbjct: 413 EGFREKALSELDKLEFIPESGSKRMRPMVSGRADWCISRQRAWGVPIPAFYHKDTNEVLM 472
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLL---NTSDVNSNVTKSNDILDIWFDSGISWSH 761
+E+ I HF ++ G D WW L VE LL + + N V + +D +D+WFDSG SW+
Sbjct: 473 DESIITHFTEIVRTRGTDAWWELEVEDLLPEQHKAKANDYV-RGSDTMDVWFDSGSSWAG 531
Query: 762 VLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
V++ + PA +Y+EG DQ GWF SSLLT VA AP++ + HGFV+DEKG KMSK
Sbjct: 532 VVQSRGLSFPADMYLEGSDQHRGWFQSSLLTGVASTGQAPYKKILTHGFVLDEKGYKMSK 591
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI + +G K K P YG D LR WV AS D
Sbjct: 592 SLGNVIDPRTVIEGGKN--------------------QKTEPGYGADTLRLWV---ASTD 628
Query: 878 PT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYV---DVYMLKRLCE 932
T V IG NI+ + + +K+R ++R+L+GVL + + G + + Y+L RL
Sbjct: 629 YTGDVSIGMNIIKQTSEAYRKLRGTIRFLMGVLDDFKPTEGVAYESLPAFEKYILSRLDA 688
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
++T Y +Y+R + +F LS Y + KD+LY N R + +
Sbjct: 689 TMQEIETSYKSHEYSRVVAAITSFTTF-LSNVYLDVSKDKLYIGEQNDIKRRACQTVVSA 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
I L+ +AP+ PH+AEE + LP
Sbjct: 748 IVERLIAAIAPLTPHMAEEAFQALP 772
Score = 328 bits (840), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/392 (44%), Positives = 250/392 (63%), Gaps = 20/392 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
F LHDGPPYANG HIGHA+NKILKD R ++ GKRV YVPGWDCHGLPIELK + +
Sbjct: 34 FTLHDGPPYANGDLHIGHALNKILKDFVNRWEMMNGKRVRYVPGWDCHGLPIELKVLQNM 93
Query: 81 D----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
D K L+P+ +R KAK FA++T+ +Q+ +F+ +G+ ADW+ Y T EY QL
Sbjct: 94 DAEARKALTPIKLRYKAKAFAMKTVASQREQFKRYGIWADWDEP-YMTLLPEYEAAQLEV 152
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH----- 191
F ++ +IYR KPV+WSPSS TALAE+ELEY HVS+SIY++ ++ VP
Sbjct: 153 FGKMFLNGHIYRGEKPVHWSPSSMTALAEAELEYPEGHVSQSIYVQFPVSDVPESTPSEL 212
Query: 192 --LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK--GANVIVAKCLVESLKW 247
LL+GA+ +WTTTPW++PAN +A N L+YSV V+ GA ++VA+ L E++
Sbjct: 213 KALLDGAS---LAVWTTTPWTMPANAAVAVNAKLDYSVCRVESTGATLVVAEGLREAVAS 269
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
+T + + F GQ +++ Y HP E++ ++ ++++ GTGLVH AP HGQDD
Sbjct: 270 KLETTLTTLGTFKGQDFENVQYQHPFY-ERKSPVIIGGEYITTEAGTGLVHTAPGHGQDD 328
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQH 365
++ + +P+ + + N G ++ +AG LEG ++LGDG + + +L E Y H
Sbjct: 329 YISGMKYGLPLYSPVDNAGLFTAEAGSDLEGKDVLGDGNVLCIEKLTSAGALLKQEAYNH 388
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 389 KYPYDWRTKKPTIFRATEQWFASVEGFREKAL 420
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ N G ++ +AG LEG ++LG+G + + +L E Y H YPYDWRTKKP I
Sbjct: 343 VDNAGLFTAEAGSDLEGKDVLGDGNVLCIEKLTSAGALLKQEAYNHKYPYDWRTKKPTIF 402
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL+ L+ + F+PES K +R ++ R WCISRQR WGVPIP F
Sbjct: 403 RATEQWFASVEGFREKALSELDKLEFIPESGSKRMRPMVSGRADWCISRQRAWGVPIPAF 462
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y DT ++++E+ I HF ++ G D WW L VE LL
Sbjct: 463 YHKDTNEVLMDESIITHFTEIVRTRGTDAWWELEVEDLL 501
>gi|186681922|ref|YP_001865118.1| isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
gi|254782424|sp|B2IZP5.1|SYI_NOSP7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|186464374|gb|ACC80175.1| isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
Length = 959
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/635 (38%), Positives = 345/635 (54%), Gaps = 49/635 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+S+SIY + V L E +DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHVSRSIYAAFPVTSLAEAVKPLLAEYQSDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN-------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITY 526
+A N L Y+V V + +IVA LVE L T ++ + F G L+ TY
Sbjct: 256 VAVNADLNYAVVEVSQSEAQSKFKYLIVAADLVERLSSTLGLELTLKATFKGNDLEHTTY 315
Query: 527 IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+L + + G ++
Sbjct: 316 RHPLFDRESPI-VVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGNFT 374
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
+AG GLN+LGDG V+ + +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 375 QEAGE-FAGLNVLGDGNQAVIDALAAAGSLLKEEPYPHKYPYDWRTKKPTIFRATEQWFA 433
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--I 702
E + EAL + V ++P + + +A+R WCISRQR WGVPIPVFYD T
Sbjct: 434 SVEGFREEALKAIATVKWIPAQGENRITPMVAERSDWCISRQRSWGVPIPVFYDEATGEP 493
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWS 760
++NE I H +I E G D WW LSVE+LL S + + D +D+WFDSG SW+
Sbjct: 494 LLNEEIINHVQGIIAEKGSDAWWELSVEELLPESYRQNGKSYRRGTDTMDVWFDSGSSWA 553
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V++ + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE+G KM
Sbjct: 554 SVVQQRPELRYPADIYLEGSDQHRGWFQSSLLTSVAVNDIAPYKTVLTHGFALDEQGRKM 613
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS GNV+ + I +G K K PAYG DVLR WV++
Sbjct: 614 SKSEGNVVDPNTIIEGGKN--------------------QKVEPAYGADVLRLWVSS-VD 652
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
V IGKNI+ D KIR++ R+LLG L + ++ +D YML R+
Sbjct: 653 YSGDVRIGKNIIKQMNDVRGKIRNTARFLLGSLDDFDPEKDTVPFEELPELDRYMLHRIT 712
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
E + + FQ+ R + + NF V +LS FY + KDRLY + + R S L
Sbjct: 713 EVFEEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYISAKDAFRRRSCQTVLK 772
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L R +AP++ H AE+++ +LP + S F
Sbjct: 773 IALDNLARAIAPVLSHTAEDIWQYLPYKTPYKSVF 807
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/394 (44%), Positives = 245/394 (62%), Gaps = 20/394 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R +L+G++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQMLRGRKVRYVPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ + L+PL +R+KAK F L T++ Q+ F+ +G+ DW+ N Y T EY Q+
Sbjct: 113 KSAERQNLTPLQLRQKAKEFGLATVDNQRQNFKRYGIWGDWD-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ----VPAHL 192
F ++ + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SIY + V L
Sbjct: 172 FGQMFLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVTSLAEAVKPLL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-------VIVAKCLVESL 245
E +DL IWTTTPW++P N +A N L Y+V V + +IVA LVE L
Sbjct: 232 AEYQSDLGVAIWTTTPWTIPGNLAVAVNADLNYAVVEVSQSEAQSKFKYLIVAADLVERL 291
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
T ++ + F G L+ TY HP+ + + ++ ++++ GTGLVH AP HGQ
Sbjct: 292 SSTLGLELTLKATFKGNDLEHTTYRHPLFDRESPI-VVGGDYITTESGTGLVHTAPGHGQ 350
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
+D+++ +P+L + + G ++ +AG GLN+LGDG V+ + +L E Y
Sbjct: 351 EDYIVGQRYGLPILAPVDDNGNFTQEAGE-FAGLNVLGDGNQAVIDALAAAGSLLKEEPY 409
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 410 PHKYPYDWRTKKPTIFRATEQWFASVEGFREEAL 443
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I
Sbjct: 367 VDDNGNFTQEAGE-FAGLNVLGDGNQAVIDALAAAGSLLKEEPYPHKYPYDWRTKKPTIF 425
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P + + +A+R WCISRQR WGVPIPVF
Sbjct: 426 RATEQWFASVEGFREEALKAIATVKWIPAQGENRITPMVAERSDWCISRQRSWGVPIPVF 485
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
YD T ++NE I H +I E G D WW L VE+LL S
Sbjct: 486 YDEATGEPLLNEEIINHVQGIIAEKGSDAWWELSVEELLPES 527
>gi|254423822|ref|ZP_05037540.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
gi|196191311|gb|EDX86275.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
Length = 963
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/637 (38%), Positives = 351/637 (55%), Gaps = 50/637 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY DHIS SIYL + + L L +WTTTPW++PAN
Sbjct: 185 TALAEAELEYPEDHISPSIYLAFPVVTASESAQSALAPYLDSLGVAVWTTTPWTIPANVA 244
Query: 474 IAFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
+A N L Y+V + +IVAK L E L F T + +V + G+ L TY HP
Sbjct: 245 VAVNADLTYAVVKSESGEPFEYLIVAKDLAEKLSDLFGTGLQIVGEIKGESLAGSTYRHP 304
Query: 530 I-NKEQRDLKLLP----AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
+ KE ++ P ++++ GTGLVH AP HGQ+DF + E++P+L + +G
Sbjct: 305 LATKEAAFDRISPIVIGGDYITTESGTGLVHTAPGHGQEDFAVGQREELPILCPVDERGN 364
Query: 585 YSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG LEGLN+L D ++ L E VL E Y H YPYDWRTKKPVI +A++QW
Sbjct: 365 FTAEAG-SLEGLNVLKTANDVLIEVLTEEKVLLKHEPYNHKYPYDWRTKKPVIYRATEQW 423
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F + +A+ + EV ++P + K + +++R WCISRQR WGVPIPVFYD +T
Sbjct: 424 FASVKGFVGDAINAINEVEWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETG 483
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN--VTKSNDILDIWFDSGIS 758
++ + I H ++ + G D WW LSV++LL + N+ K D +D+WFDSG S
Sbjct: 484 EPLMTQETIAHVQAIVAKKGADAWWELSVDELLPEAYRNNGKRYIKGTDTMDVWFDSGSS 543
Query: 759 WSHVLK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V++ D PA +Y+EG DQ GWF SSLLTSVA AP+ V HG+V+DE G
Sbjct: 544 WASVVQQREGLDYPAEIYLEGSDQHRGWFQSSLLTSVATNGHAPYHQVLTHGYVLDENGR 603
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GN + I +G GN K+ P YG DVLR WV++
Sbjct: 604 KMSKSLGNGVDPKVIIEG-----------GN---------NKKQEPPYGADVLRLWVSS- 642
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKR 929
+ +G + D +KIR++ R+LLG LH+ S +I+ +D YML R
Sbjct: 643 VDYSGDMRLGMRNVKQMSDVYRKIRNTARFLLGNLHDFDPSRDAIAYEQLPDLDQYMLHR 702
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E + T + +Q+ + + + NF V +LS FY + KDRLY S N R S
Sbjct: 703 MTEVFADVKTAFESYQFFQFFQTVQNFCVVDLSNFYLDIAKDRLYISSANSARRRSCQTV 762
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L L + +AP++ H+AE+++ LP G+ S F
Sbjct: 763 LSVAIESLAKAIAPVLSHMAEDIWQALPYEAGSESVF 799
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 248/400 (62%), Gaps = 22/400 (5%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G+P FILHDGPPYANG H+GHA+NKILKDI + +LQG++V YVPGWDCHGLPIELK
Sbjct: 39 GEP-FILHDGPPYANGDLHMGHALNKILKDIVNKYQILQGRKVRYVPGWDCHGLPIELKV 97
Query: 77 I----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKN 132
+ +S+ + L+P+ +R+KAK FAL+T+ Q F+ +GV DW+H Y T EY
Sbjct: 98 LQKMKSSERRELTPIKLRQKAKEFALKTVEKQSEGFQRYGVWGDWDH-PYMTLLPEYEAA 156
Query: 133 QLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQV 188
QL F + + YIYR L+ V+WSPSS+TALAE+ELEY DH+S SIYL +
Sbjct: 157 QLGVFGKMVENGYIYRGLRSVHWSPSSQTALAEAELEYPEDHISPSIYLAFPVVTASESA 216
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVES 244
+ L L +WTTTPW++PAN +A N L Y+V + +IVAK L E
Sbjct: 217 QSALAPYLDSLGVAVWTTTPWTIPANVAVAVNADLTYAVVKSESGEPFEYLIVAKDLAEK 276
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPI-NKEQRDLKLLP----AGFVSSSKGTGLVHC 299
L F T +++V + G+ L TY HP+ KE ++ P ++++ GTGLVH
Sbjct: 277 LSDLFGTGLQIVGEIKGESLAGSTYRHPLATKEAAFDRISPIVIGGDYITTESGTGLVHT 336
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVL 358
AP HGQ+DF + E++P+L + +G ++ +AG LEGLN+L D ++ L E VL
Sbjct: 337 APGHGQEDFAVGQREELPILCPVDERGNFTAEAG-SLEGLNVLKTANDVLIEVLTEEKVL 395
Query: 359 WT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y H YPYDWRTKKPVI +A++QWF + +A+
Sbjct: 396 LKHEPYNHKYPYDWRTKKPVIYRATEQWFASVKGFVGDAI 435
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVIL 1166
+ +G ++ +AG LEGLN+L D ++ L E VL E Y H YPYDWRTKKPVI
Sbjct: 359 VDERGNFTAEAG-SLEGLNVLKTANDVLIEVLTEEKVLLKHEPYNHKYPYDWRTKKPVIY 417
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + +A+ + V ++P + K + +++R WCISRQR WGVPIPVF
Sbjct: 418 RATEQWFASVKGFVGDAINAINEVEWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVF 477
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD +T ++ + I H ++ + G D WW L V++LL
Sbjct: 478 YDEETGEPLMTQETIAHVQAIVAKKGADAWWELSVDELL 516
>gi|332712037|ref|ZP_08431967.1| isoleucyl-tRNA synthetase [Moorea producens 3L]
gi|332349365|gb|EGJ28975.1| isoleucyl-tRNA synthetase [Moorea producens 3L]
Length = 959
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 242/634 (38%), Positives = 347/634 (54%), Gaps = 49/634 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S SIY + + + E +L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSPSIYAAFPITKAGPGIKEILEPFLPNLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN-----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP L Y+V ++VA LVE L T +T + V G+ L+D TY H
Sbjct: 256 VAVNPELTYAVVEDGSQTNQFQFLLVAADLVERLSATLETPLTVKTTVKGEALEDCTYQH 315
Query: 529 PINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
P+ R+ K++ G ++++ GTGLVH AP HGQ+D+ + +P+L+ + GK++
Sbjct: 316 PLF--DRESKIVIGGDYITTESGTGLVHTAPGHGQEDYGVGQRYGLPILSPVDADGKFTA 373
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
+AG GLN+L D ++ + +L Y H YPYDWRTKKP I +A++QWF
Sbjct: 374 EAGQ-FAGLNVLKDANPAIIEALNTAGSLLKEVPYVHKYPYDWRTKKPTIFRATEQWFAS 432
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
E + EA+ + V ++P + + +A R WCISRQR WGVPIPVFYD +T +
Sbjct: 433 VEGFRDEAINAIASVKWIPAQGQNRITPMVADRCDWCISRQRSWGVPIPVFYDEETNEPL 492
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSH 761
+NE I + +I E G D WW LSVE+LL S N+ T K ND +D+WFDSG SW+
Sbjct: 493 LNEETIAYVQGIIAEKGSDAWWELSVEELLPESYRNNGKTYRKGNDTMDVWFDSGSSWAA 552
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V + + P +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+D++G KMS
Sbjct: 553 VAEQREELRYPVDIYLEGSDQHRGWFQSSLLTSVASNGYAPYKTVLTHGFVLDDQGRKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN++ I +G K KK P YG DVLR WV++
Sbjct: 613 KSLGNILEPAIIIEGGK--------------------NHKKEPPYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCE 932
VPI ++IL D +KIR++ R+LLG LH+ + + +D YML R+ E
Sbjct: 652 SSDVPISQSILKQLADVYRKIRNTARFLLGNLHDFDPAKDKVPVQELPELDRYMLHRITE 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + +Q+ R + + NF V +LS FY + KDRLY + N R S L
Sbjct: 712 VFEDVTDAFESYQFFRFFQSVQNFCVVDLSNFYLDIAKDRLYISAPNSPRRRSCQTVLQI 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ H+AE+++ +LP ++ S F
Sbjct: 772 AVENLAKAIAPVLCHMAEDIWQYLPYQKSHESVF 805
Score = 325 bits (834), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 250/411 (60%), Gaps = 21/411 (5%)
Query: 4 FSELYSWQREALNGKPE-FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
++E ++R + N E F+LHDGPPYANG+ H+GHA+NK+LKDI + LLQG++V YV
Sbjct: 35 WAEQTIYERLSQNNPGEIFVLHDGPPYANGSLHMGHALNKVLKDIINKYQLLQGRKVRYV 94
Query: 63 PGWDCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + + + + L+P+ +R+KAK FAL+T+ Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQAMKLEERQQLTPIKLRRKAKKFALKTVEQQSKGFQRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T + +Y Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S S
Sbjct: 155 -NPYLTLNPQYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSPS 213
Query: 179 IYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
IY + + + E +L IWTTTPW++P N +A NP L Y+V
Sbjct: 214 IYAAFPITKAGPGIKEILEPFLPNLGVAIWTTTPWTIPGNLAVAVNPELTYAVVEDGSQT 273
Query: 235 -----VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FV 288
++VA LVE L T +T + V G+ L+D TY HP+ R+ K++ G ++
Sbjct: 274 NQFQFLLVAADLVERLSATLETPLTVKTTVKGEALEDCTYQHPLF--DRESKIVIGGDYI 331
Query: 289 SSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ 348
++ GTGLVH AP HGQ+D+ + +P+L+ + GK++ +AG GLN+L D
Sbjct: 332 TTESGTGLVHTAPGHGQEDYGVGQRYGLPILSPVDADGKFTAEAGQ-FAGLNVLKDANPA 390
Query: 349 VLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ + +L Y H YPYDWRTKKP I +A++QWF E + EA+
Sbjct: 391 IIEALNTAGSLLKEVPYVHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAI 441
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 5/172 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + GK++ +AG GLN+L + ++ + +L Y H YPYDWRTKKP
Sbjct: 362 LSPVDADGKFTAEAGQ-FAGLNVLKDANPAIIEALNTAGSLLKEVPYVHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + EA+ + V ++P + + +A R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDEAINAIASVKWIPAQGQNRITPMVADRCDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
PVFYD +T ++NE I + +I E G D WW L VE+LL S N+ T
Sbjct: 481 PVFYDEETNEPLLNEETIAYVQGIIAEKGSDAWWELSVEELLPESYRNNGKT 532
>gi|348674400|gb|EGZ14219.1| hypothetical protein PHYSODRAFT_511967 [Phytophthora sojae]
Length = 1059
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 253/668 (37%), Positives = 369/668 (55%), Gaps = 75/668 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP-------AHLLEGATD-LHALIWTTTPWSLP 469
TALAE+ELEY+ DH+S++ Y+K + + A +LE D L A++WTTTPW++P
Sbjct: 206 TALAEAELEYQDDHVSQAAYVKFRFASMGSNASKEMASVLEKYGDKLSAVVWTTTPWTIP 265
Query: 470 ANQFIAFNPALEYSVASVKGANV----IVAKCLVEN----LKWTFQTDID--VVCDFPGQ 519
+NQ + N L+Y V +GA+ ++A L E+ LK +TD++ V+ G
Sbjct: 266 SNQALCVNAELDYVVVRPRGADSDACYLIASALQESFATMLKGDAETDVELEVLETLKGA 325
Query: 520 YLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA------EKI 573
L+ + HP+ RD +L V++ GTG+VH AP HGQDD+ +A E
Sbjct: 326 DLEGAHFTHPLVN--RDAVVLVGEHVTTDAGTGVVHTAPGHGQDDYFAWMAHHSKPGEHP 383
Query: 574 PVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTK 631
+L + G ++ +AG GL+GL+++G+G V+ L++ ++L Y H YPYDWRTK
Sbjct: 384 DILCPVDADGCFTAEAGQGLQGLSVVGEGNTAVIDLLKSSGNLLSINEYHHRYPYDWRTK 443
Query: 632 KPVILKASQQWFIDTERIKPEALACLEE-VNFVPESAKKTLRDQIAQRPYWCISRQRVWG 690
+PVIL+A+ QWF + + LE+ V VP SA++ L ++ R WCISRQR WG
Sbjct: 444 QPVILRATAQWFARLDALHARGKRVLEDSVQMVPPSARRRLEATLSSRHEWCISRQRAWG 503
Query: 691 VPIPVFYDGDT--IIVNEANIKHFCTLI------------DEHGPDFWWSLSVEQLLNTS 736
+PIPVFY T ++ E +I+H ++ + G D WW LSV +LL S
Sbjct: 504 LPIPVFYHKVTGEPLITEESIEHLQNIVKSYRVEGEDGEVEREGADCWWDLSVRELLPES 563
Query: 737 --DVNSNVTKSNDILDIWFDSGISWSHVLKD--KP-------AHVYMEGMDQINGWFMSS 785
D K D LD+WFDSG SW VL + +P A VY+EG DQ GWF SS
Sbjct: 564 LQDQADQYEKGTDTLDVWFDSGSSWHAVLPNLLEPNEEGQIRADVYLEGSDQHRGWFQSS 623
Query: 786 LLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKK-LPAYEKS--- 841
LLTS+A++ TAP++NV HGF +DE+G+KMSKS+GN I +D G +P +K
Sbjct: 624 LLTSLAMQGTAPYKNVITHGFTLDERGSKMSKSLGNTIVPNDFINGCTMPVPVADKGSNA 683
Query: 842 --VGNVISAHDITQGA-----KKLPAYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQD 892
D+ Q + K+PAYGVDVLR+WV A+ D T V IG ++ + D
Sbjct: 684 NKKKKAKKNSDMPQKSPKVKQMKVPAYGVDVLRFWV---ATTDYTGDVSIGPGVVGKASD 740
Query: 893 DVQKIRSSLRYLLGVLHN-----HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYA 947
++K+R++ R+LLG L + H+ + +D YML L ++ Y F +
Sbjct: 741 ALRKVRNTARFLLGNLQDFDPAQHAVPHDKMQFSLDRYMLHELNSLAESVTAAYDAFAFN 800
Query: 948 RASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPH 1007
RA L +F+ +LSAFY KDRLYCD+ + + R S L L R +AP++PH
Sbjct: 801 RAQHALSHFISTDLSAFYMEATKDRLYCDAADSQTRRSAQTVLWLSLQALTRALAPVVPH 860
Query: 1008 LAEEVYSH 1015
AE++ H
Sbjct: 861 TAEDIRLH 868
Score = 318 bits (816), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 246/409 (60%), Gaps = 35/409 (8%)
Query: 11 QREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
++ A +P F+LHDGPP+ANG+ H+GH +NK LKD+ R LL+G+RV YVPGWDCHGL
Sbjct: 49 EQAADESRPLFVLHDGPPFANGSLHMGHFLNKTLKDVINRYQLLRGRRVRYVPGWDCHGL 108
Query: 71 PIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE----HNCYH 123
PIE KA+T + K LSP +R ++ A + + Q+ +FE WGVLADW + Y
Sbjct: 109 PIEHKALTLLQLEAKDLSPAQVRALSRQLARKAVQEQQKDFERWGVLADWSGADAESVYL 168
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q + I+R KPVYWSPSSRTALAE+ELEY+ DHVS++ Y+K
Sbjct: 169 TMAPEYEARQYDVLKKMVHDGLIFRGFKPVYWSPSSRTALAEAELEYQDDHVSQAAYVKF 228
Query: 184 KLNQVP-------AHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN- 234
+ + A +LE D L A++WTTTPW++P+NQ + N L+Y V +GA+
Sbjct: 229 RFASMGSNASKEMASVLEKYGDKLSAVVWTTTPWTIPSNQALCVNAELDYVVVRPRGADS 288
Query: 235 ---VIVAKCLVES----LKWTFQTDI--EVVCDFPGQYLQDITYIHPINKEQRDLKLLPA 285
++A L ES LK +TD+ EV+ G L+ + HP+ RD +L
Sbjct: 289 DACYLIASALQESFATMLKGDAETDVELEVLETLKGADLEGAHFTHPLVN--RDAVVLVG 346
Query: 286 GFVSSSKGTGLVHCAPAHGQDDFLLALA------EKIPVLNLITNQGKYSPDAGPGLEGL 339
V++ GTG+VH AP HGQDD+ +A E +L + G ++ +AG GL+GL
Sbjct: 347 EHVTTDAGTGVVHTAPGHGQDDYFAWMAHHSKPGEHPDILCPVDADGCFTAEAGQGLQGL 406
Query: 340 NILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 386
+++G+G V+ L++ ++L Y H YPYDWRTK+PVIL+A+ QWF
Sbjct: 407 SVVGEGNTAVIDLLKSSGNLLSINEYHHRYPYDWRTKQPVILRATAQWF 455
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 17/175 (9%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ +AG GL+GL+++GEG V+ L++ ++L Y H YPYDWRTK+PVIL
Sbjct: 389 VDADGCFTAEAGQGLQGLSVVGEGNTAVIDLLKSSGNLLSINEYHHRYPYDWRTKQPVIL 448
Query: 1167 KASQQWFIDTERIKPEALACLE-GVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
+A+ QWF + + LE V VP SA++ L ++ R WCISRQR WG+PIPV
Sbjct: 449 RATAQWFARLDALHARGKRVLEDSVQMVPPSARRRLEATLSSRHEWCISRQRAWGLPIPV 508
Query: 1226 FYDGDT--IIVNEANIKHFCTL------------IDEHGPDFWWSLPVEQLLNTS 1266
FY T ++ E +I+H + ++ G D WW L V +LL S
Sbjct: 509 FYHKVTGEPLITEESIEHLQNIVKSYRVEGEDGEVEREGADCWWDLSVRELLPES 563
>gi|425468553|ref|ZP_18847563.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
gi|389884790|emb|CCI34946.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
Length = 952
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/626 (39%), Positives = 344/626 (54%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L T + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTLNRTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPVKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 337 bits (863), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/403 (45%), Positives = 246/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L T + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTLNRTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALEAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|422302702|ref|ZP_16390062.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
gi|389788022|emb|CCI16652.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
Length = 952
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/626 (39%), Positives = 344/626 (54%), Gaps = 40/626 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY H S+S+Y+ + V +L +L IWTTTPW+LP N +A
Sbjct: 196 TALAEAELEYPEGHTSRSVYVAFPITSVSTPVLRPFLPNLSVAIWTTTPWTLPGNLAVAL 255
Query: 477 NPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP L YSV +N +IVA LVE L T + + G L+ Y HP+ +
Sbjct: 256 NPELNYSVVETSESNYLIVATDLVEKLADTLNRTLTIKATVKGLELEHTKYRHPLFDRES 315
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + ++G ++ +AG G
Sbjct: 316 AI-LIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAG 373
Query: 596 LNILGDGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
LN+L D + + L L E L E YQH YPYDWRTKKP I +A++QWF E + A
Sbjct: 374 LNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELA 433
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++ V ++P + K + +++R WCISRQR WGVPIPVFYD +T ++ E I H
Sbjct: 434 LDAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETINH 493
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
+ G + WW LSVE+LL S D + K D +D+WFDSG SW+ V +
Sbjct: 494 VQAIFAVKGSNAWWELSVEELLPPSYRDNGRSYRKGMDTMDVWFDSGSSWNAVANARPEL 553
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DE+G KMSKS+GNVI
Sbjct: 554 SYPADMYLEGSDQHRGWFQSSLLTSVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVID 613
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ I G K KK PAYGVDV+R WV++ V IG+
Sbjct: 614 PNVIINGGKD--------------------QKKEPAYGVDVIRLWVSS-VDYTNDVNIGQ 652
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
NIL D KIR++ R+LLG L++ +++ +D YML R+ E +
Sbjct: 653 NILKQLVDIRNKIRNTARFLLGSLNDFDPVKDAVAYEDLPEIDRYMLHRISEVFTEVTAA 712
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
+ FQ+ R + + NF V +LS FY + KDRLY N R S L +
Sbjct: 713 FESFQFFRFFQTVQNFCVVDLSNFYIDIAKDRLYISDPNSFRRRSCQTVYAIALENLAKA 772
Query: 1001 VAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+AP++ HLAE+++ LP + S F
Sbjct: 773 IAPVLSHLAEDIWQFLPYKTPYLSVF 798
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/403 (45%), Positives = 246/403 (61%), Gaps = 18/403 (4%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ + L+PL +R+KA +FAL+T Q F+ +GV DWE
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPLKLRQKAHDFALQTQKEQCEGFKRYGVWGDWE 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+S
Sbjct: 155 -NPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRS 213
Query: 179 IYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VI 236
+Y+ + V +L +L IWTTTPW+LP N +A NP L YSV +N +I
Sbjct: 214 VYVAFPITSVSTPVLRPFLPNLSVAIWTTTPWTLPGNLAVALNPELNYSVVETSESNYLI 273
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA LVE L T + + G L+ Y HP+ + + L+ +V++ GTGL
Sbjct: 274 VATDLVEKLADTLNRTLTIKATVKGLELEHTKYRHPLFDRESAI-LIGGDYVTTDSGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ-VLHLVEP 355
VH AP HGQ+D+++ +P+L+ + ++G ++ +AG GLN+L D + +L L E
Sbjct: 333 VHTAPGHGQEDYIVGQRYGLPILSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEK 391
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 392 GALLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRELAL 434
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQV-LHLVEPDVLWTEN-YQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG GLN+L + + + L L E L E YQH YPYDWRTKKP
Sbjct: 355 LSPVDDKGNFTAEAGQ-FAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + K + +++R WCISRQR WGVPI
Sbjct: 414 TIFRATEQWFASVEGFRELALDAIDSVRWIPATGKNRITSMVSERSDWCISRQRSWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++ E I H + G + WW L VE+LL
Sbjct: 474 PVFYDEETNEPLLTEETINHVQAIFAVKGSNAWWELSVEELL 515
>gi|414077208|ref|YP_006996526.1| isoleucyl-tRNA synthetase [Anabaena sp. 90]
gi|413970624|gb|AFW94713.1| isoleucyl-tRNA synthetase [Anabaena sp. 90]
Length = 972
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/631 (39%), Positives = 347/631 (54%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEG-ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+S+SIY + +V L L+G DL +WTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHVSRSIYAAFPVVKVAEGLKASLDGFLPDLGVAVWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASV-----KGAN-------VIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
+A N ALEY+V V +GA +IVA LVE L ++ V F G+ L
Sbjct: 256 VAVNGALEYAVVEVSRKDAQGAKAQRECRYLIVAAELVERLGEVLDCELTVKAKFAGKDL 315
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ TY HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+L + +
Sbjct: 316 EGTTYRHPLFDRESPV-VVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDD 374
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G ++ +AG GLN+LG+G ++ + +L E Y H YPYDWRTKKP I +A+
Sbjct: 375 SGNFTDEAGK-FSGLNVLGEGNQAIIDALSEAGYLLKEEAYPHKYPYDWRTKKPTIFRAT 433
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG 699
+QWF + EAL + V ++P + + IA+R WCISRQR WGVPIPVFYD
Sbjct: 434 EQWFASVAGFRDEALKAISSVRWIPAQGENRITPMIAERSDWCISRQRSWGVPIPVFYDE 493
Query: 700 DT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDS 755
T I++N I H +I E G D WW LSVE+LL + N+ T + D +D+WFDS
Sbjct: 494 ATGEILLNADTINHVQAIIAEKGSDAWWELSVEELLPEAYRNNGKTYRRGTDTMDVWFDS 553
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE
Sbjct: 554 GSSWAAVAKQRPELRYPADMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDE 613
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
G KMSKSVGNV+ + QG K+ PAYG DVLR WV
Sbjct: 614 NGRKMSKSVGNVVDPQLMIQGGTN--------------------QKQQPAYGADVLRLWV 653
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ V +G NI+ D KIR++ R+LLG LH+ ++ +D YM
Sbjct: 654 SS-VDYSGDVRLGGNIIKQLADVRNKIRNTARFLLGSLHDFDPQKDVVAFDDLPDLDKYM 712
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L R+ E N + + FQ+ R + + NF V +LS FY + KDRLY S + R S
Sbjct: 713 LHRIREVFNEVTDAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYISSADAFRRRSC 772
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L L +AP++ H AE+++ +P
Sbjct: 773 QTVLQIALENLAIAIAPVLCHTAEDIWQFIP 803
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/399 (45%), Positives = 251/399 (62%), Gaps = 25/399 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI R +LLQG+++ YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGQLHIGHALNKILKDIINRYHLLQGRKIRYVPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++ + L+PL +R+KAK FAL+T++ Q+ F+ +G+ DWE N Y T EY Q+
Sbjct: 113 KQAERQNLTPLQLRQKAKEFALKTVDEQRESFKRYGIWGDWE-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL---L 193
F ++ + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SIY + +V L L
Sbjct: 172 FGEMFLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVVKVAEGLKASL 231
Query: 194 EG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV-----KGAN-------VIVAKC 240
+G DL +WTTTPW++P N +A N ALEY+V V +GA +IVA
Sbjct: 232 DGFLPDLGVAVWTTTPWTIPGNLAVAVNGALEYAVVEVSRKDAQGAKAQRECRYLIVAAE 291
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
LVE L ++ V F G+ L+ TY HP+ + + ++ ++++ GTGLVH A
Sbjct: 292 LVERLGEVLDCELTVKAKFAGKDLEGTTYRHPLFDRESPV-VVGGDYITTESGTGLVHTA 350
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VL 358
P HGQ+D+++ +P+L + + G ++ +AG GLN+LG+G ++ + +L
Sbjct: 351 PGHGQEDYIVGQRYGLPILAPVDDSGNFTDEAGK-FSGLNVLGEGNQAIIDALSEAGYLL 409
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y H YPYDWRTKKP I +A++QWF + EAL
Sbjct: 410 KEEAYPHKYPYDWRTKKPTIFRATEQWFASVAGFRDEAL 448
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LGEG ++ + +L E Y H YPYDWRTKKP I
Sbjct: 372 VDDSGNFTDEAGK-FSGLNVLGEGNQAIIDALSEAGYLLKEEAYPHKYPYDWRTKKPTIF 430
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + EAL + V ++P + + IA+R WCISRQR WGVPIPVF
Sbjct: 431 RATEQWFASVAGFRDEALKAISSVRWIPAQGENRITPMIAERSDWCISRQRSWGVPIPVF 490
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
YD T I++N I H +I E G D WW L VE+LL + N+ T
Sbjct: 491 YDEATGEILLNADTINHVQAIIAEKGSDAWWELSVEELLPEAYRNNGKT 539
>gi|428226290|ref|YP_007110387.1| isoleucyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
gi|427986191|gb|AFY67335.1| Isoleucyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
Length = 959
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/625 (38%), Positives = 347/625 (55%), Gaps = 49/625 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN----QVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S++ + V L E +L IWTTTPW++PAN
Sbjct: 196 TALAEAELEYPEGHTSRSLFAAFPMTGLAPAVQEDLGEYLPELGVAIWTTTPWTIPANLA 255
Query: 474 IAFNPALEYSVAS-----VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
++ NP L+Y+V V +IVA LVE L TF + V PG+ L+ TY H
Sbjct: 256 VSVNPDLKYAVVEADLPQVNRKYLIVAADLVERLSETFGKALTVKAVVPGKALEHSTYRH 315
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ + + ++ +V++ GTGLVH AP HGQ+D+++ +P+ + + + G ++ +
Sbjct: 316 PLFDRESPV-VIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLPIFSPVDDNGHFTEE 374
Query: 589 AGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
AGP G N+LG+G V+ ++ +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 375 AGP-FAGQNVLGEGNGAVVEALKAAGSLLKEEPYVHKYPYDWRTKKPTIFRATEQWFASV 433
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTII 703
+ + +AL + +V ++P + + +++R WCISRQR WGVPIPVFYD GD ++
Sbjct: 434 DGFREDALKAIAQVKWIPAQGENRITSMVSERSDWCISRQRSWGVPIPVFYDQETGDALM 493
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSH 761
E I H ++ + G D WW LSVE+LL K D +D+WFDSG SW+
Sbjct: 494 TAE-TIAHVQAIVADQGSDAWWKLSVEELLPEQHRAEAHRYRKGTDTMDVWFDSGSSWAA 552
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V++ + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE+G KMS
Sbjct: 553 VVQQREGLTYPADLYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFTLDEQGRKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KSVGNV+ + +G K K+ P YG DVLR WV++
Sbjct: 613 KSVGNVVDPAVVIEGGKN--------------------QKEDPPYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
VP+GKNIL D +KIR++ R+LLG LH+ + ++ +D YML R+ E
Sbjct: 652 SSDVPLGKNILKQLADVYRKIRNTARFLLGNLHDFEPAQHAVPYDELPELDRYMLHRMTE 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + FQ+ R + + NF V +LS FY + KDRLY + + R S L
Sbjct: 712 VFAEVKDAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAPDAFRRRSCQTVLAQ 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
L R +AP++ H+AE+++ LP
Sbjct: 772 AIECLARAIAPVLCHMAEDIWQSLP 796
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/407 (43%), Positives = 254/407 (62%), Gaps = 19/407 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E+Y + G P FILHDGPPYANG+ HIGHA+NKILKDI + LLQG+++ YVPGW
Sbjct: 39 EIYETLSQNNPGAP-FILHDGPPYANGSLHIGHALNKILKDIINKYQLLQGRKISYVPGW 97
Query: 66 DCHGLPIELK---AITSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
DCHGLPIELK A++S+++ L+P+ +R+KAK FAL+T+ Q+ F+ +GV DW+H
Sbjct: 98 DCHGLPIELKVLQAMSSEERQGLTPITLREKAKKFALKTVEEQRKSFKRYGVWGDWDHP- 156
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY QL F + + +IYR KPV+WSPSS+TALAE+ELEY H S+S++
Sbjct: 157 YLTLSPEYEAAQLGVFGQMVLKGHIYRGRKPVHWSPSSKTALAEAELEYPEGHTSRSLFA 216
Query: 182 KIKLN----QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS-----VKG 232
+ V L E +L IWTTTPW++PAN ++ NP L+Y+V V
Sbjct: 217 AFPMTGLAPAVQEDLGEYLPELGVAIWTTTPWTIPANLAVSVNPDLKYAVVEADLPQVNR 276
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
+IVA LVE L TF + V PG+ L+ TY HP+ + + ++ +V++
Sbjct: 277 KYLIVAADLVERLSETFGKALTVKAVVPGKALEHSTYRHPLFDRESPV-VIGGDYVTTES 335
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH AP HGQ+D+++ +P+ + + + G ++ +AGP G N+LG+G V+
Sbjct: 336 GTGLVHTAPGHGQEDYMVGQRYGLPIFSPVDDNGHFTEEAGP-FAGQNVLGEGNGAVVEA 394
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ +L E Y H YPYDWRTKKP I +A++QWF + + +AL
Sbjct: 395 LKAAGSLLKEEPYVHKYPYDWRTKKPTIFRATEQWFASVDGFREDAL 441
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 7/160 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AGP G N+LGEG V+ ++ +L E Y H YPYDWRTKKP I
Sbjct: 365 VDDNGHFTEEAGP-FAGQNVLGEGNGAVVEALKAAGSLLKEEPYVHKYPYDWRTKKPTIF 423
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + +AL + V ++P + + +++R WCISRQR WGVPIPVF
Sbjct: 424 RATEQWFASVDGFREDALKAIAQVKWIPAQGENRITSMVSERSDWCISRQRSWGVPIPVF 483
Query: 1227 YD---GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD GD ++ E I H ++ + G D WW L VE+LL
Sbjct: 484 YDQETGDALMTAE-TIAHVQAIVADQGSDAWWKLSVEELL 522
>gi|427724546|ref|YP_007071823.1| isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
gi|427356266|gb|AFY38989.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
Length = 963
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/635 (38%), Positives = 352/635 (55%), Gaps = 49/635 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH----LLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ + ++ L E A L IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSQSIYVSFPITELSDTAKEILGEYADSLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVASVKGA-----NVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+A NP LEY+V G +IVAK L E L TF++ + + F G ++ TY H
Sbjct: 256 VAINPDLEYAVVETDGTLCAQKYLIVAKDLAETLTETFESALSIKGSFKGNVIEQCTYQH 315
Query: 529 PINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
P+ R ++ G ++++ GTGLVH AP HGQ+D++ +P+L+ + +G +
Sbjct: 316 PLF--DRKSPVVAGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLPLLSPVDAEGTLTT 373
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
+AG GLN+L D+++ ++ +L E YQH YPYDWRTKKP I +A++QWF
Sbjct: 374 EAGE-FAGLNVLNGANDKIIEALKGKQALLKEEAYQHKYPYDWRTKKPTIFRATEQWFAS 432
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTII 703
E + +ALA +++V ++P + + + R WCISRQR WGVPIPVFYD + +
Sbjct: 433 VEGFRDQALAAIKDVQWIPAQGENRITPMVGDRSDWCISRQRTWGVPIPVFYDEETNEEL 492
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSH 761
+NE I + LI + G + WW VE+LL S N+ T K D +D+WFDSG SW+
Sbjct: 493 LNEETINYVKELIAKDGSNIWWQKPVEELLPESYRNNGHTYRKGTDTMDVWFDSGSSWAA 552
Query: 762 VLK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K D P +Y+EG DQ GWF SSLLTSVA+ + AP++ V HGFV+DEKG KMS
Sbjct: 553 VAKQREGMDYPVDMYLEGSDQHRGWFQSSLLTSVAVNNCAPYKTVLTHGFVLDEKGYKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KSVGNV+ + I G K KK P YG DVLR WV++
Sbjct: 613 KSVGNVVDPNIIINGGK--------------------NQKKEPPYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
VPIG+ IL D +KIR++ R+LLG +H+ + +I+ +D Y+L +
Sbjct: 652 SSDVPIGQTILKQLADVYRKIRNTARFLLGNIHDFDPAKNAIAYEDLAELDKYILHQASN 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + + FQ+ + + + NF V +LS FY KDRLY + R S +
Sbjct: 712 VFSDVTEAFESFQFFKFFQKVQNFCVVDLSNFYLDAAKDRLYISDTDSPRRRSCQTVIAL 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFC 1027
I +L + +AP++ H+AE+++ +LP S F
Sbjct: 772 ILEMLTKAIAPVLCHMAEDIWQNLPYETSEKSVFA 806
Score = 330 bits (847), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 244/402 (60%), Gaps = 20/402 (4%)
Query: 14 ALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE 73
A N F LHDGPPYANG H+GHA+NK+LKD+ + LLQG + YVPGWDCHGLPIE
Sbjct: 46 ADNPGSTFTLHDGPPYANGDLHMGHALNKVLKDVINKYKLLQGHKTRYVPGWDCHGLPIE 105
Query: 74 LKAITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
LK + S + K L+P+ +R KA++FA++T Q F+ +GV DWE N Y T +Y
Sbjct: 106 LKVLQSMNDEVRKNLTPIKLRYKARDFAIKTQKKQAKSFQRYGVWGDWE-NPYLTLTPDY 164
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY+ + ++
Sbjct: 165 EAAQIEVFGEMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSQSIYVSFPITELS 224
Query: 190 AH----LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA-----NVIVAKC 240
L E A L IWTTTPW+LP N +A NP LEY+V G +IVAK
Sbjct: 225 DTAKEILGEYADSLGVAIWTTTPWTLPGNLAVAINPDLEYAVVETDGTLCAQKYLIVAKD 284
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHC 299
L E+L TF++ + + F G ++ TY HP+ R ++ G ++++ GTGLVH
Sbjct: 285 LAETLTETFESALSIKGSFKGNVIEQCTYQHPLF--DRKSPVVAGGDYITTESGTGLVHT 342
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--V 357
AP HGQ+D++ +P+L+ + +G + +AG GLN+L D+++ ++ +
Sbjct: 343 APGHGQEDYITGQKYGLPLLSPVDAEGTLTTEAGE-FAGLNVLNGANDKIIEALKGKQAL 401
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
L E YQH YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 402 LKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDQALAA 443
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 5/172 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + +G + +AG GLN+L D+++ ++ +L E YQH YPYDWRTKKP
Sbjct: 362 LSPVDAEGTLTTEAGE-FAGLNVLNGANDKIIEALKGKQALLKEEAYQHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + +ALA ++ V ++P + + + R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFRDQALAAIKDVQWIPAQGENRITPMVGDRSDWCISRQRTWGVPI 480
Query: 1224 PVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
PVFYD + ++NE I + LI + G + WW PVE+LL S N+ T
Sbjct: 481 PVFYDEETNEELLNEETINYVKELIAKDGSNIWWQKPVEELLPESYRNNGHT 532
>gi|428300822|ref|YP_007139128.1| isoleucyl-tRNA synthetase [Calothrix sp. PCC 6303]
gi|428237366|gb|AFZ03156.1| Isoleucyl-tRNA synthetase [Calothrix sp. PCC 6303]
Length = 964
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/642 (38%), Positives = 352/642 (54%), Gaps = 56/642 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y + + + L E L IWTTTPW++PAN
Sbjct: 196 TALAEAELEYPEGHTSRSMYAAFPMVSLADGAKSALGEYLPSLGVAIWTTTPWTIPANLA 255
Query: 474 IAFNPALEYSVA-------------SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQY 520
+A NP L+YSV +V +IVAK L+++L F ++ V G+
Sbjct: 256 VAVNPDLDYSVVEVGQVASNADTQWNVSSKYLIVAKDLIDSLAEKFNVELTVKTTVKGKD 315
Query: 521 LQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLIT 580
L+ TY HP+ + + + ++ ++++ GTGLVH AP HGQ+D++ +P+L+ +
Sbjct: 316 LEHSTYKHPLFERESPI-VIGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLPILSPVD 374
Query: 581 NQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVILKA 638
+ G ++ +AG GLN+LGDG VL L +L E YQH YPYDWRTKKP I +A
Sbjct: 375 DGGNFTEEAGQ-FAGLNVLGDGNQAVLDAMLAAGALLKEEPYQHKYPYDWRTKKPTIFRA 433
Query: 639 SQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD 698
++QWF E + AL + +V ++P + + ++ R WCISRQR WGVPIPVFYD
Sbjct: 434 TEQWFASVEGFRDRALDAIAQVRWIPPQGENRITPMVSDRSDWCISRQRNWGVPIPVFYD 493
Query: 699 GDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN--VTKSNDILDIWFD 754
+T +++ E I H + E G + WW +SVE+LL N+ + D +D+WFD
Sbjct: 494 EETNEVLMTEETINHIRDIFAEKGSNAWWEMSVEELLPEQYRNNGRRYRQGFDTMDVWFD 553
Query: 755 SGISWSHVLKDK------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVV 808
SG SW+ V+K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +
Sbjct: 554 SGSSWASVVKQRQELSKYPVDIYLEGSDQHRGWFQSSLLTSVAVNDCAPYKTVLTHGFTL 613
Query: 809 DEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRW 868
DEKG KMSKS+GNV+ + + +G K K+ P YG DVLR
Sbjct: 614 DEKGFKMSKSLGNVLDPNVVIEGGKN--------------------QKEEPPYGADVLRL 653
Query: 869 WVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDV 924
WV++ + IGKN+L D KIR++ R LLG LH+ ++ VD
Sbjct: 654 WVSSVDYTNDQ-RIGKNVLKQLGDIRGKIRNTARVLLGNLHDFDPEKDAVPYDKLPAVDK 712
Query: 925 YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARL 984
YML R+ E N + + FQ+ R + + NF V +LS+FY + KDRLY + G R
Sbjct: 713 YMLHRMTEVFNEVTEAFESFQFFRFFQTVQNFCVVDLSSFYIDIAKDRLYISTPEGFRRR 772
Query: 985 SGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
S L+ L R +AP++ HLAE+++ LP + S F
Sbjct: 773 STQTVLYLALENLTRAIAPVLCHLAEDIWQFLPYKTPYKSVF 814
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 246/400 (61%), Gaps = 26/400 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R L+QG++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLMQGRKVRYVPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++ + L+PL +R+KA FALE + Q+ F+ +GV DWEH Y T EY Q+
Sbjct: 113 KQAERQELTPLKLRQKAHEFALEAVEGQRKGFKRYGVWGDWEH-PYLTLTPEYEAAQIDV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQVPAHL 192
F ++ + YIYR LKPV WSPSSRTALAE+ELEY H S+S+Y + + + L
Sbjct: 172 FGQMFLKGYIYRGLKPVNWSPSSRTALAEAELEYPEGHTSRSMYAAFPMVSLADGAKSAL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-------------SVKGANVIVAK 239
E L IWTTTPW++PAN +A NP L+YSV +V +IVAK
Sbjct: 232 GEYLPSLGVAIWTTTPWTIPANLAVAVNPDLDYSVVEVGQVASNADTQWNVSSKYLIVAK 291
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L++SL F ++ V G+ L+ TY HP+ + + + ++ ++++ GTGLVH
Sbjct: 292 DLIDSLAEKFNVELTVKTTVKGKDLEHSTYKHPLFERESPI-VIGGDYITTESGTGLVHT 350
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDV 357
AP HGQ+D++ +P+L+ + + G ++ +AG GLN+LGDG VL L +
Sbjct: 351 APGHGQEDYITGQKYGLPILSPVDDGGNFTEEAGQ-FAGLNVLGDGNQAVLDAMLAAGAL 409
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E YQH YPYDWRTKKP I +A++QWF E + AL
Sbjct: 410 LKEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDRAL 449
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ +AG GLN+LG+G VL L +L E YQH YPYDWRTKKP
Sbjct: 370 LSPVDDGGNFTEEAGQ-FAGLNVLGDGNQAVLDAMLAAGALLKEEPYQHKYPYDWRTKKP 428
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL + V ++P + + ++ R WCISRQR WGVPI
Sbjct: 429 TIFRATEQWFASVEGFRDRALDAIAQVRWIPPQGENRITPMVSDRSDWCISRQRNWGVPI 488
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T +++ E I H + E G + WW + VE+LL
Sbjct: 489 PVFYDEETNEVLMTEETINHIRDIFAEKGSNAWWEMSVEELL 530
>gi|356564073|ref|XP_003550281.1| PREDICTED: isoleucyl-tRNA synthetase-like [Glycine max]
Length = 1093
Score = 418 bits (1075), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/684 (36%), Positives = 371/684 (54%), Gaps = 82/684 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ---VPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+S+SIY ++ P+ LL+ +L+ +WTTTPW++PAN +
Sbjct: 293 TALAEAELEYPEKHVSRSIYAIFRVVSAPLTPSSLLQEFPNLYLAVWTTTPWTIPANAAV 352
Query: 475 AFNPALEYSVASVK---------GAN----------------VIVAKCLVENLKWTFQTD 509
A NP LEY+V +K G N +IVA LV +L+ +
Sbjct: 353 AVNPKLEYAVVEIKSLPEPDPSSGGNKKKGLGLVLKDEKLPFLIVASELVPSLEAKWGVK 412
Query: 510 IDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLA 568
+ V G L++ YIHP++ R+ ++ G ++++ GTGLVH AP HGQ+D++
Sbjct: 413 LVVKTRQLGSELENYRYIHPVD--DRECPVVIGGDYITTETGTGLVHTAPGHGQEDYVTG 470
Query: 569 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPY 626
+P+L+ + + G+++ +AG GL++LG+G V+ ++ ++ E+Y+H YPY
Sbjct: 471 QKYGLPILSPVDDDGRFTEEAGQ-FSGLDVLGEGNTAVVKYLDEHLSLIMEESYEHKYPY 529
Query: 627 DWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQ 686
DWRTKKP I +A++QWF E + A+ + V +VP A + + R WCISRQ
Sbjct: 530 DWRTKKPTIFRATEQWFASVEGFRHTAMDAIGHVKWVPPQAANRISSMTSIRSDWCISRQ 589
Query: 687 RVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNV 742
R WGVPIPVFY ++NE I H ++I + G D WW ++VE LL T D +
Sbjct: 590 RTWGVPIPVFYHLQSREPLMNEETIDHIKSIIAQKGSDAWWYMTVEDLLPTKYRDKAAEY 649
Query: 743 TKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAP 797
K D +D+WFDSG SW+ VL + PA +Y+EG DQ GWF SSLLTSVA K AP
Sbjct: 650 EKGTDTMDVWFDSGSSWAAVLGKRDSLSYPADLYLEGTDQHRGWFQSSLLTSVATKGKAP 709
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
+ +V HGFV+DEKG KMSKS+GNV+ + +G+K ++
Sbjct: 710 YLSVLTHGFVLDEKGLKMSKSLGNVVDPRLVIEGSK--------------------NQRE 749
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN----HSE 913
PAYG DVLR WV++ V IG IL + +K+R +LRYLL LH+ ++
Sbjct: 750 SPAYGADVLRLWVSS-VDYTSDVMIGPQILRQMSEVYRKLRGTLRYLLANLHDWKVKYTV 808
Query: 914 STGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
+ R +D + L +L + Y +Q+ + ++L FV+ +LS FYF + KDRL
Sbjct: 809 PYHELPR-IDQHALFQLENVVKAIQGNYENYQFFKIFQILQRFVIVDLSNFYFDVAKDRL 867
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYL 1033
Y R S L ++R +API+PHLAE+V+ +LP + Y+
Sbjct: 868 YVGGSTSYTRKSCQTVLAAHLLSIVRIIAPILPHLAEDVWQNLPFQ------------YI 915
Query: 1034 QYSGSIAKRILYCD-SINGEARLS 1056
GSIA+ + I+ E RL+
Sbjct: 916 TQDGSIAEYVFESRWPISNERRLA 939
Score = 329 bits (844), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 177/417 (42%), Positives = 254/417 (60%), Gaps = 39/417 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG HIGHA+NKILKDI R +LQ +V+++PGWDCHGLPIELK
Sbjct: 145 NSGENFILHDGPPYANGDLHIGHALNKILKDIINRYKVLQNYKVNFIPGWDCHGLPIELK 204
Query: 76 AITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D+ L+PL +R KA FA ET+ Q + F+ +GV ADW ++ Y T + EY
Sbjct: 205 VLQSLDQNARNELTPLKLRAKAAKFAKETVKKQMSSFKRYGVWADW-NDPYLTLNPEYEA 263
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ---V 188
Q+ F + + YIYR KPV+WSPSSRTALAE+ELEY HVS+SIY ++
Sbjct: 264 AQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEKHVSRSIYAIFRVVSAPLT 323
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK---------GAN----- 234
P+ LL+ +L+ +WTTTPW++PAN +A NP LEY+V +K G N
Sbjct: 324 PSSLLQEFPNLYLAVWTTTPWTIPANAAVAVNPKLEYAVVEIKSLPEPDPSSGGNKKKGL 383
Query: 235 -----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLL 283
+IVA LV SL+ + + V G L++ YIHP+ + R+ ++
Sbjct: 384 GLVLKDEKLPFLIVASELVPSLEAKWGVKLVVKTRQLGSELENYRYIHPV--DDRECPVV 441
Query: 284 PAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNIL 342
G ++++ GTGLVH AP HGQ+D++ +P+L+ + + G+++ +AG GL++L
Sbjct: 442 IGGDYITTETGTGLVHTAPGHGQEDYVTGQKYGLPILSPVDDDGRFTEEAGQ-FSGLDVL 500
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
G+G V+ ++ ++ E+Y+H YPYDWRTKKP I +A++QWF E + A+
Sbjct: 501 GEGNTAVVKYLDEHLSLIMEESYEHKYPYDWRTKKPTIFRATEQWFASVEGFRHTAM 557
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + + G+++ +AG GL++LGEG V+ ++ ++ E+Y+H YPYDWRTKKP
Sbjct: 478 LSPVDDDGRFTEEAGQ-FSGLDVLGEGNTAVVKYLDEHLSLIMEESYEHKYPYDWRTKKP 536
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + A+ + V +VP A + + R WCISRQR WGVPI
Sbjct: 537 TIFRATEQWFASVEGFRHTAMDAIGHVKWVPPQAANRISSMTSIRSDWCISRQRTWGVPI 596
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNT 1265
PVFY ++NE I H ++I + G D WW + VE LL T
Sbjct: 597 PVFYHLQSREPLMNEETIDHIKSIIAQKGSDAWWYMTVEDLLPT 640
>gi|218247493|ref|YP_002372864.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
gi|254782387|sp|B7K5H5.1|SYI_CYAP8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|218167971|gb|ACK66708.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
Length = 959
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/642 (37%), Positives = 354/642 (55%), Gaps = 49/642 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SI+ IK ++ +L+ ++L IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSQSIFAAFPIIKSSKDAQEILDPFLSNLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYI 527
+A NP L Y++ + +N +IVA LVE L TF T++ V PGQ L+ Y
Sbjct: 256 VALNPELTYAIVE-QTSNLCNYQYIIVAADLVERLSATFSTELTVKATLPGQILEHTIYR 314
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
HP+ + ++ ++ +V++ GTGLVH AP HGQ+D+++ + VL+ + + G ++
Sbjct: 315 HPLYDRESEI-VIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLQVLSPVDDAGNFTE 373
Query: 588 DAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
+AG GLN+L D +++ ++ +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 374 EAGQ-FSGLNVLKDANQAIINELKNKGSLLKEEPYLHKYPYDWRTKKPTIFRATEQWFAS 432
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
E + AL ++ VN++P + + ++ R WCISRQR WGVPIPVFY+ +T +
Sbjct: 433 VEGFREAALEAIKSVNWIPPQGENRITPMVSDRSDWCISRQRSWGVPIPVFYNEETNEPL 492
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSH 761
+ E I H +I + G D WW LS+E+LL + D +D+WFDSG SW+
Sbjct: 493 LTEETINHVQAIIAKQGSDAWWELSIEELLPEQYKKDAHKYRRGTDTMDVWFDSGSSWAA 552
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMS
Sbjct: 553 VAKQREELKYPVDIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGHKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN++ I G K K+ P YG DVLR WV++
Sbjct: 613 KSLGNIVDPLVIINGGK--------------------NQKQEPPYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
VPIG+ IL D +KIR++ R+LLG LH+ ++S +D YML R+ E
Sbjct: 652 SSDVPIGQTILKQLSDVYRKIRNTARFLLGNLHDFDPEKDTVSYDQLPELDQYMLHRITE 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + +FQ+ R + + NF V +LS FY + KDRLY N R S L
Sbjct: 712 VFTEVTDAFEKFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISDTNSLRRRSCQTVLKV 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQ 1034
L + +AP++ H+AE+++ LP + S F V +Q
Sbjct: 772 AVESLAKAIAPVLCHMAEDIWQFLPYKTPYQSVFASGWVEMQ 813
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 247/393 (62%), Gaps = 20/393 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG+ H+GHA+NK LKDI + LL+G +V YVPGWDCHGLPIELK + S
Sbjct: 53 FILHDGPPYANGSLHMGHALNKTLKDIINKYKLLRGHKVRYVPGWDCHGLPIELKVLQSM 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+PL +R+KA++FAL+T Q F+ +GV DWE N Y T EY Q+
Sbjct: 113 KSEEREGLTPLKLRRKARDFALKTQQEQAEGFKRYGVWGDWE-NPYLTLTPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK---IKLNQVPAHLL 193
F + + YIYR LKPV+WSPSSRTALAE+ELEY H S+SI+ IK ++ +L
Sbjct: 172 FGQMALKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSQSIFAAFPIIKSSKDAQEIL 231
Query: 194 EG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------VIVAKCLVESLK 246
+ ++L IWTTTPW+LP N +A NP L Y++ + +N +IVA LVE L
Sbjct: 232 DPFLSNLGVAIWTTTPWTLPGNLAVALNPELTYAIVE-QTSNLCNYQYIIVAADLVERLS 290
Query: 247 WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
TF T++ V PGQ L+ Y HP+ + ++ ++ +V++ GTGLVH AP HGQ+
Sbjct: 291 ATFSTELTVKATLPGQILEHTIYRHPLYDRESEI-VIGGDYVTTESGTGLVHTAPGHGQE 349
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV--EPDVLWTENYQ 364
D+++ + VL+ + + G ++ +AG GLN+L D +++ + + +L E Y
Sbjct: 350 DYIVGQRYGLQVLSPVDDAGNFTEEAGQ-FSGLNVLKDANQAIINELKNKGSLLKEEPYL 408
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YPYDWRTKKP I +A++QWF E + AL
Sbjct: 409 HKYPYDWRTKKPTIFRATEQWFASVEGFREAAL 441
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ +AG GLN+L + +++ ++ +L E Y H YPYDWRTKKP
Sbjct: 362 LSPVDDAGNFTEEAGQ-FSGLNVLKDANQAIINELKNKGSLLKEEPYLHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ VN++P + + ++ R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFREAALEAIKSVNWIPPQGENRITPMVSDRSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY+ +T ++ E I H +I + G D WW L +E+LL
Sbjct: 481 PVFYNEETNEPLLTEETINHVQAIIAKQGSDAWWELSIEELL 522
>gi|255551751|ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
Length = 1102
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/645 (37%), Positives = 359/645 (55%), Gaps = 71/645 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP--AHLL--EGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+SKSIY ++ P + LL E DL IWTTTPW++PAN
Sbjct: 302 TALAEAELEYPEGHVSKSIYAIFRVASAPPTSRLLLEEFFPDLFLAIWTTTPWTVPANAA 361
Query: 474 IAFNPALEYSVASVKG---------------ANV---------IVAKCLVENLKWTFQTD 509
+A N L+Y+V V+ NV IVA L+ L+ +
Sbjct: 362 VAVNSKLQYAVVEVQSLEDASTSPGNKKRRFGNVLREQKKLFLIVASDLMPTLEAKWSVK 421
Query: 510 IDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLA 568
+ + G L++ YIHPI+ R+ ++ G ++++ GTGLVH AP HGQ+D++
Sbjct: 422 LVIKKTLSGSDLENCRYIHPID--NRECPVVIGGDYITTESGTGLVHTAPGHGQEDYITG 479
Query: 569 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPY 626
+ +PVL+ + + GK++ +A P GL++LG+G V+ ++ ++ E+Y+H YPY
Sbjct: 480 MKYGLPVLSPVDDGGKFTEEAAP-FSGLDVLGEGNVAVVKYLDEQMSIVMEESYEHKYPY 538
Query: 627 DWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQ 686
DWRTKKP I +A++QWF E + A+ + V ++P A+K + + R WCISRQ
Sbjct: 539 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGHVKWIPPQAEKRISTMTSSRSDWCISRQ 598
Query: 687 RVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNV 742
R WGVPIPVFY ++N I H +++ + G D WW ++VE LL + D S
Sbjct: 599 RTWGVPIPVFYHVQSREPLMNAETIDHIKSIVAQKGSDAWWYMTVENLLPDTYRDRASEY 658
Query: 743 TKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAP 797
+ D +D+WFDSG SW+ VL + PA +Y+EG DQ GWF SSLLTS+A K AP
Sbjct: 659 ERGTDTMDVWFDSGSSWAAVLGRRSGLNYPADLYLEGSDQHRGWFQSSLLTSIATKGKAP 718
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
+ +V HGFV+DEKG KMSKS+GNV+ + +G K A
Sbjct: 719 YSSVITHGFVLDEKGFKMSKSLGNVVDPRTVIEGGK--------------------SAGG 758
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS 917
PAYG DVLR WV++ V IG IL D +K+R +LRYLLG LH+ ++ +
Sbjct: 759 APAYGADVLRLWVSS-VDYTGDVMIGPQILRQMSDIYRKLRGTLRYLLGNLHDW-KADDA 816
Query: 918 ISRYVDVYMLKR--LCEFQNTMDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
+S Y D+ M+ + L + +N + + Y +Q+ + +++ FV+ +LS FYF + KDR
Sbjct: 817 VS-YDDLPMIDKHALYQLENVVKNIRESYENYQFFKIFQIIQRFVIVDLSNFYFDVAKDR 875
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
LY R S L +++ VAPI+PHLAE+V+ +LP
Sbjct: 876 LYVGGTTTFTRKSCQTVLAAHLLSIVKVVAPILPHLAEDVWQNLP 920
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 244/430 (56%), Gaps = 55/430 (12%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG HIGHA+NKILKD+ R +LQ +VH+VPGWDCHGLPIELK
Sbjct: 144 NDGGNFILHDGPPYANGDLHIGHAMNKILKDVINRYKILQNYKVHFVPGWDCHGLPIELK 203
Query: 76 AITSKDKLLSPLDIRKKAKNFALETIN-----------------TQKAEFESWGVLADWE 118
K K+L L + A E + TQ A F+ +GV ADW+
Sbjct: 204 G---KYKVLFWLRFLQSLDQGAREDLTPSKLRAKAAKFAKATVKTQMASFKRYGVWADWD 260
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T D +Y Q+ F + Q YIYR KPV+WSPSS TALAE+ELEY HVSKS
Sbjct: 261 -NPYLTLDPDYEAAQIEVFGQMALQGYIYRGRKPVHWSPSSHTALAEAELEYPEGHVSKS 319
Query: 179 IYLKIKLNQVP--AHLL--EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-- 232
IY ++ P + LL E DL IWTTTPW++PAN +A N L+Y+V V+
Sbjct: 320 IYAIFRVASAPPTSRLLLEEFFPDLFLAIWTTTPWTVPANAAVAVNSKLQYAVVEVQSLE 379
Query: 233 -------------ANV---------IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYI 270
NV IVA L+ +L+ + + + G L++ YI
Sbjct: 380 DASTSPGNKKRRFGNVLREQKKLFLIVASDLMPTLEAKWSVKLVIKKTLSGSDLENCRYI 439
Query: 271 HPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 329
HPI+ R+ ++ G ++++ GTGLVH AP HGQ+D++ + +PVL+ + + GK++
Sbjct: 440 HPID--NRECPVVIGGDYITTESGTGLVHTAPGHGQEDYITGMKYGLPVLSPVDDGGKFT 497
Query: 330 PDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFI 387
+A P GL++LG+G V+ ++ ++ E+Y+H YPYDWRTKKP I +A++QWF
Sbjct: 498 EEAAP-FSGLDVLGEGNVAVVKYLDEQMSIVMEESYEHKYPYDWRTKKPTIFRATEQWFA 556
Query: 388 DTERIKPEAL 397
E + A+
Sbjct: 557 SVEGFRQAAM 566
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + + GK++ +A P GL++LGEG V+ ++ ++ E+Y+H YPYDWRTKKP
Sbjct: 487 LSPVDDGGKFTEEAAP-FSGLDVLGEGNVAVVKYLDEQMSIVMEESYEHKYPYDWRTKKP 545
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + A+ + V ++P A+K + + R WCISRQR WGVPI
Sbjct: 546 TIFRATEQWFASVEGFRQAAMDAIGHVKWIPPQAEKRISTMTSSRSDWCISRQRTWGVPI 605
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY ++N I H +++ + G D WW + VE LL
Sbjct: 606 PVFYHVQSREPLMNAETIDHIKSIVAQKGSDAWWYMTVENLL 647
>gi|428773540|ref|YP_007165328.1| isoleucyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
gi|428687819|gb|AFZ47679.1| Isoleucyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
Length = 972
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/640 (37%), Positives = 355/640 (55%), Gaps = 54/640 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKI---KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H S+SIY KL+ +HL + +L IWTTTPW++P N +
Sbjct: 196 TALAEAELEYPEGHTSRSIYASFTITKLSDKASHLEQYMPNLGVAIWTTTPWTIPGNLAV 255
Query: 475 AFNPALEYSVASV-------------KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
A N L+Y+V V +G +IVA+ LVE+L TF + V G L
Sbjct: 256 AVNGKLDYAVVEVIAENDPPKPPLIKEGQFLIVAQDLVESLGNTFGAKLAVKTTVKGADL 315
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ TY HP+ + + ++ ++++ GTGLVH AP HGQ+D++ +P+L+ + N
Sbjct: 316 ELSTYKHPLFDRESPV-VIGGDYITTESGTGLVHTAPGHGQEDYITGQKYHLPILSPVDN 374
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKAS 639
+G ++ +AG GLN+L D ++ + + +L E YQH YPYDWRTK+P I +A+
Sbjct: 375 KGNFTEEAGE-FAGLNVLKDANQAIIDALTDKGSLLKEEAYQHKYPYDWRTKQPTIFRAT 433
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG 699
+QWF + + EAL ++EVN++P + + +++R WCISRQR WG+PIPVFYD
Sbjct: 434 EQWFASVDGFREEALKAIKEVNWIPAQGENRITPMVSERNDWCISRQRSWGLPIPVFYDE 493
Query: 700 DT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDS 755
+T ++NE I H +I E G D WW +SVE+LL S N+ T K D +D+WFDS
Sbjct: 494 ETNEPLLNEETINHVRDIIGEKGSDAWWLMSVEELLPESYRNNGKTYRKGMDTMDVWFDS 553
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE
Sbjct: 554 GSSWAAVANQRDELKYPVDLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKTVLTHGFVLDE 613
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS GNV+ + I G K+ P YG DVLR WV
Sbjct: 614 KGMKMSKSEGNVVDPNLIINGG--------------------LNQKQQPPYGADVLRLWV 653
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYM 926
++ V IG +I+ D +KIR++ R+L+G LH+ + +++ +D Y+
Sbjct: 654 SS-TDYSADVRIGDSIIKQLADVYRKIRNTARFLIGSLHDFDPAKNAVNYADLPELDKYI 712
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L E + Y FQ+ + + + NF V +LS FY + KDRLY ++ R S
Sbjct: 713 LHETHEVFTEITEAYESFQFFKFFQKVQNFCVVDLSNFYLDVAKDRLYISDLDSARRRSC 772
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ I L R +AP++ H+AE+++ +LP + S F
Sbjct: 773 QTVMAIILENLARAIAPVLCHMAEDIWQNLPYSKPCNSVF 812
Score = 329 bits (844), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/404 (44%), Positives = 245/404 (60%), Gaps = 25/404 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N K F+LHDGPPYANG H+GHA+NK+LKDI + LLQG +V YVPGWDCHGLPIELK
Sbjct: 48 NPKELFVLHDGPPYANGDLHMGHALNKVLKDIINKYKLLQGHKVRYVPGWDCHGLPIELK 107
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S K LSP+ +R KA++FAL+T Q F+ +G+ DWE N Y T EY
Sbjct: 108 VLQSIPEEKRPELSPIKLRYKARDFALKTQKKQAEGFKRYGIWGDWE-NPYLTLKPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI---KLNQV 188
Q+ F + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY KL+
Sbjct: 167 AQIEVFGKMALNGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIYASFTITKLSDK 226
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV-------------KGANV 235
+HL + +L IWTTTPW++P N +A N L+Y+V V +G +
Sbjct: 227 ASHLEQYMPNLGVAIWTTTPWTIPGNLAVAVNGKLDYAVVEVIAENDPPKPPLIKEGQFL 286
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
IVA+ LVESL TF + V G L+ TY HP+ + + ++ ++++ GTG
Sbjct: 287 IVAQDLVESLGNTFGAKLAVKTTVKGADLELSTYKHPLFDRESPV-VIGGDYITTESGTG 345
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV-- 353
LVH AP HGQ+D++ +P+L+ + N+G ++ +AG GLN+L D ++ +
Sbjct: 346 LVHTAPGHGQEDYITGQKYHLPILSPVDNKGNFTEEAGE-FAGLNVLKDANQAIIDALTD 404
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +L E YQH YPYDWRTK+P I +A++QWF + + EAL
Sbjct: 405 KGSLLKEEAYQHKYPYDWRTKQPTIFRATEQWFASVDGFREEAL 448
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 105/172 (61%), Gaps = 5/172 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKP 1163
L+ + N+G ++ +AG GLN+L + ++ + + +L E YQH YPYDWRTK+P
Sbjct: 369 LSPVDNKGNFTEEAGE-FAGLNVLKDANQAIIDALTDKGSLLKEEAYQHKYPYDWRTKQP 427
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF + + EAL ++ VN++P + + +++R WCISRQR WG+PI
Sbjct: 428 TIFRATEQWFASVDGFREEALKAIKEVNWIPAQGENRITPMVSERNDWCISRQRSWGLPI 487
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
PVFYD +T ++NE I H +I E G D WW + VE+LL S N+ T
Sbjct: 488 PVFYDEETNEPLLNEETINHVRDIIGEKGSDAWWLMSVEELLPESYRNNGKT 539
>gi|224107153|ref|XP_002314391.1| predicted protein [Populus trichocarpa]
gi|222863431|gb|EEF00562.1| predicted protein [Populus trichocarpa]
Length = 981
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 293/853 (34%), Positives = 426/853 (49%), Gaps = 114/853 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP----AHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+SKSIY ++ P L E DL IWTTTPW++PAN
Sbjct: 180 TALAEAELEYPEGHVSKSIYAIFRVVSAPPTSDGLLEEFFPDLCLAIWTTTPWTVPANAA 239
Query: 474 IAFNPALEYSV---------ASVKGAN----------------VIVAKCLVENLKWTFQT 508
+A N L+Y+V AS N +IVA LV L+ +
Sbjct: 240 VAVNAKLQYAVIEVQSFSGDASTSSGNKKQRLGHVLKEQKKPFLIVASDLVPTLEAKWGV 299
Query: 509 DIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLL 567
+ V G L++ YIHPI+K R+ ++ G ++++ GTGLVH AP HG++D++
Sbjct: 300 KLVVKKTLLGSDLENCRYIHPIDK--RECPVVIGGDYITTESGTGLVHTAPGHGREDYVT 357
Query: 568 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL--WTENYQHSYP 625
L +P+++ + + GK++ +A GL++LGDG V+ ++ +L E+YQH+YP
Sbjct: 358 GLKYGLPIISPVDDDGKFTEEA-VQFSGLDVLGDGNIAVMKYLDEQMLLIMEESYQHNYP 416
Query: 626 YDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISR 685
YDWRTKKP I +A++QWF E + A+ + +V ++P + + + R WCISR
Sbjct: 417 YDWRTKKPTIFRATEQWFASVEGFRQSAMEAISQVKWIPPQGENRITAMTSSRSDWCISR 476
Query: 686 QRVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSN 741
QR WGVPIPVFY T ++NE I H ++I G D WW + VE LL D S+
Sbjct: 477 QRTWGVPIPVFYHLKTKEPLLNEETIDHIKSIIALKGSDAWWYMKVEDLLPEKYRDQASD 536
Query: 742 VTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTA 796
K D +D+WFDSG SW+ VL PA +Y+EG DQ GWF SSLLTS+A K A
Sbjct: 537 YEKGMDTMDVWFDSGSSWAAVLGKSGGPKFPADLYLEGTDQHRGWFQSSLLTSIATKGKA 596
Query: 797 PFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAK 856
P+ +V HGFV+DEKG KMSKS+GNV+ H I +G + +K
Sbjct: 597 PYTSVITHGFVLDEKGCKMSKSLGNVVDPHTIIEGGRN--------------------SK 636
Query: 857 KLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
+ P YG DVLR WV++ V IG +L D +K+R +LRYLLG LH+ E+
Sbjct: 637 EAPGYGADVLRLWVSS-VDYTGDVMIGTQVLRQISDIYRKLRGTLRYLLGNLHDW-EAGN 694
Query: 917 SISRYVDVYMLKRLCEFQ-----NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
+IS Y D+ M+ + FQ NT+ Y +Q+ + +++ FV+ +LS FYF + KD
Sbjct: 695 AIS-YNDLPMIDKHALFQLENVVNTIRESYDNYQFFKIFQIIQRFVIVDLSNFYFDVAKD 753
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTF--SSFCHF 1029
RLY R S L + R +API+PHLAE+V+ +LP Q T S F
Sbjct: 754 RLYVGGTTSHTRRSCQTVLAAHLLSIARVIAPILPHLAEDVWQNLPF-QFTVQDGSAAKF 812
Query: 1030 KVYLQYSGSIAKRILY-CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH-- 1086
++ + K + + + I+ ++ L T N + RT I L +VY H
Sbjct: 813 VFESKWPATNEKWLAFPIEEIDFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLHAS 872
Query: 1087 ---LPSRQGTFSSFCHFKVYHHLNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD 1143
L SR + + H IT+Q ++LH VE +
Sbjct: 873 DASLASRLHEMCTASNDADALHRIFITSQA---------------------EMLHHVEDE 911
Query: 1144 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRD 1203
VL Y Y +++ S++ +I R E L C N+ P+
Sbjct: 912 VLKAIPYSGEY----------LIQGSERVWIGVSR--AEGLKCERCWNYTPQVGSFVEHP 959
Query: 1204 QIAQRPYWCISRQ 1216
+ R Y ++ Q
Sbjct: 960 TLCGRCYKVVAVQ 972
Score = 293 bits (750), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 247/421 (58%), Gaps = 43/421 (10%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F+LHDGPPYANG H+GHA+NKILKD+ R +LQ +VHYVPGWDCHGLPIELK
Sbjct: 29 NEGEHFVLHDGPPYANGELHMGHALNKILKDVINRYKILQNYKVHYVPGWDCHGLPIELK 88
Query: 76 A---ITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
+ S D K L+ +R KA FA T+ TQ A F+ +GV DWE Y T D E
Sbjct: 89 GKHFLQSMDQEARKDLTQSKLRAKAAKFAKATVKTQMASFKRFGVWGDWERP-YLTLDPE 147
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
Y Q+ F + Q YIYR KPV+WSPSSRTALAE+ELEY HVSKSIY ++
Sbjct: 148 YEAAQIEVFGQMAFQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHVSKSIYAIFRVVSA 207
Query: 189 P----AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV---------ASVKGAN- 234
P L E DL IWTTTPW++PAN +A N L+Y+V AS N
Sbjct: 208 PPTSDGLLEEFFPDLCLAIWTTTPWTVPANAAVAVNAKLQYAVIEVQSFSGDASTSSGNK 267
Query: 235 ---------------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRD 279
+IVA LV +L+ + + V G L++ YIHPI+K R+
Sbjct: 268 KQRLGHVLKEQKKPFLIVASDLVPTLEAKWGVKLVVKKTLLGSDLENCRYIHPIDK--RE 325
Query: 280 LKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 338
++ G ++++ GTGLVH AP HG++D++ L +P+++ + + GK++ +A G
Sbjct: 326 CPVVIGGDYITTESGTGLVHTAPGHGREDYVTGLKYGLPIISPVDDDGKFTEEA-VQFSG 384
Query: 339 LNILGDGKDQVLHLVEPDVL--WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
L++LGDG V+ ++ +L E+YQH+YPYDWRTKKP I +A++QWF E + A
Sbjct: 385 LDVLGDGNIAVMKYLDEQMLLIMEESYQHNYPYDWRTKKPTIFRATEQWFASVEGFRQSA 444
Query: 397 L 397
+
Sbjct: 445 M 445
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVL--WTENYQHSYPYDWRTKKPVIL 1166
+ + GK++ +A GL++LG+G V+ ++ +L E+YQH+YPYDWRTKKP I
Sbjct: 369 VDDDGKFTEEA-VQFSGLDVLGDGNIAVMKYLDEQMLLIMEESYQHNYPYDWRTKKPTIF 427
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + A+ + V ++P + + + R WCISRQR WGVPIPVF
Sbjct: 428 RATEQWFASVEGFRQSAMEAISQVKWIPPQGENRITAMTSSRSDWCISRQRTWGVPIPVF 487
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y T ++NE I H ++I G D WW + VE LL
Sbjct: 488 YHLKTKEPLLNEETIDHIKSIIALKGSDAWWYMKVEDLL 526
>gi|254409885|ref|ZP_05023665.1| isoleucyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
gi|196182921|gb|EDX77905.1| isoleucyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
Length = 1163
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/663 (36%), Positives = 349/663 (52%), Gaps = 86/663 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+S+Y L + V A L DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSLYAAFPLTKATDSVEAKLKPYLVDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASV--KGAN---------------------------------------- 491
+A NP L Y++ V K A+
Sbjct: 256 VAVNPELTYAIVEVSEKSASQEAEKSSKPSKTKAKGFAPTQDEDSLESESADFDTEAEGF 315
Query: 492 --VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 549
+IVA LVE L T D+ V GQ L TY HP+ + + ++ ++++
Sbjct: 316 KYLIVAAELVERLSQTLDKDLTVKTTLKGQELDQCTYRHPLFDRESPI-VIGGDYITTES 374
Query: 550 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 609
GTGLVH AP HGQ+D+++ +P+++ + G ++ +AGP GLN+L + V+
Sbjct: 375 GTGLVHTAPGHGQEDYIVGQRYNLPIISPVDGNGDFTTEAGP-FAGLNVLRNANPAVIDA 433
Query: 610 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESA 667
++ L ENY H YPYDWRTK+P I +A++QWF + + E + ++ VN++P
Sbjct: 434 LKEAGSFLKEENYIHKYPYDWRTKEPTIFRATEQWFASVDGFREEVMKAIQSVNWIPSQG 493
Query: 668 KKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWW 725
+ + +++R WCISRQR WGVPIPVFYD +T ++ E I H +I E G D WW
Sbjct: 494 ENRITAMVSERSDWCISRQRSWGVPIPVFYDEETNEPLLTEETIAHVQGIIAEKGSDAWW 553
Query: 726 SLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQI 778
L V +LL S N+ T K D +D+WFDSG SW+ V++++ P +Y+EG DQ
Sbjct: 554 ELPVTELLPESYRNNGRTYRKGTDTMDVWFDSGSSWAGVVQEREELSYPVDMYLEGSDQH 613
Query: 779 NGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAY 838
GWF SS+LTSVA AP+++V HGFV+DE+G KMSKSVGNV+ I +G K
Sbjct: 614 RGWFQSSILTSVATNGCAPYKSVLTHGFVLDEQGRKMSKSVGNVVDPATIIEGGKN---- 669
Query: 839 EKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIR 898
K+ P YG D+LR WV++ VPIG+ IL D +KIR
Sbjct: 670 ----------------HKQEPPYGADMLRLWVSS-VDYSVDVPIGQGILKQLSDIYRKIR 712
Query: 899 SSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLL 954
++ R+LLG LH+ + +++ +D YML R+ E + + +Q+ R + +
Sbjct: 713 NTARFLLGNLHDFDPAKNAVAYEQLPELDRYMLHRITEVFGEVTEAFDSYQFFRFFQTVQ 772
Query: 955 NFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
NF V +LS FY + KDRLY + R S L L R++AP++ H AE+++
Sbjct: 773 NFCVVDLSNFYLDMAKDRLYISHPDSVRRRSCQTVLAIALENLARSIAPVLCHTAEDIWQ 832
Query: 1015 HLP 1017
+LP
Sbjct: 833 YLP 835
Score = 323 bits (827), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/431 (40%), Positives = 243/431 (56%), Gaps = 57/431 (13%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
FILHDGPPYANG HIGHA+NKILKDI + LLQG +V YVPGWDCHGLPIELK + +
Sbjct: 53 FILHDGPPYANGALHIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQAM 112
Query: 81 D----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
D + L+P+ +R+KA+ FAL+T++ Q+ F+ +GV DW+H Y T EY Q+
Sbjct: 113 DAEERQALTPIKLRRKARKFALKTVDQQRQGFQRYGVWGDWDH-PYLTLTPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ----VPAHL 192
F + + YIYR +KPV+WSPSS+TALAE+ELEY H S+S+Y L + V A L
Sbjct: 172 FGQMVLKGYIYRGMKPVHWSPSSQTALAEAELEYPEGHTSRSLYAAFPLTKATDSVEAKL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--KGAN---------------- 234
DL IWTTTPW++P N +A NP L Y++ V K A+
Sbjct: 232 KPYLVDLGVAIWTTTPWTIPGNLAVAVNPELTYAIVEVSEKSASQEAEKSSKPSKTKAKG 291
Query: 235 --------------------------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDIT 268
+IVA LVE L T D+ V GQ L T
Sbjct: 292 FAPTQDEDSLESESADFDTEAEGFKYLIVAAELVERLSQTLDKDLTVKTTLKGQELDQCT 351
Query: 269 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 328
Y HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+++ + G +
Sbjct: 352 YRHPLFDRESPI-VIGGDYITTESGTGLVHTAPGHGQEDYIVGQRYNLPIISPVDGNGDF 410
Query: 329 SPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 386
+ +AGP GLN+L + V+ ++ L ENY H YPYDWRTK+P I +A++QWF
Sbjct: 411 TTEAGP-FAGLNVLRNANPAVIDALKEAGSFLKEENYIHKYPYDWRTKEPTIFRATEQWF 469
Query: 387 IDTERIKPEAL 397
+ + E +
Sbjct: 470 ASVDGFREEVM 480
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ +AGP GLN+L V+ ++ L ENY H YPYDWRTK+P I
Sbjct: 404 VDGNGDFTTEAGP-FAGLNVLRNANPAVIDALKEAGSFLKEENYIHKYPYDWRTKEPTIF 462
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + E + ++ VN++P + + +++R WCISRQR WGVPIPVF
Sbjct: 463 RATEQWFASVDGFREEVMKAIQSVNWIPSQGENRITAMVSERSDWCISRQRSWGVPIPVF 522
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
YD +T ++ E I H +I E G D WW LPV +LL S N+ T
Sbjct: 523 YDEETNEPLLTEETIAHVQGIIAEKGSDAWWELPVTELLPESYRNNGRT 571
>gi|119511990|ref|ZP_01631086.1| isoleucyl-tRNA synthetase [Nodularia spumigena CCY9414]
gi|119463341|gb|EAW44282.1| isoleucyl-tRNA synthetase [Nodularia spumigena CCY9414]
Length = 958
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/626 (38%), Positives = 340/626 (54%), Gaps = 49/626 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH----LLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY + + L E L IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFPITGLSEAAKPVLGEFLPHLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN-------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITY 526
+A N L YSV V + +IVA LVE L T ++ V F GQ L+ TY
Sbjct: 256 VAVNGDLNYSVVEVSRRDAEAQSEFLIVATDLVERLAATLDAELAVRATFKGQVLEHSTY 315
Query: 527 IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+L + + G ++
Sbjct: 316 RHPLFDRESPV-VVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGDFT 374
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
+AG GLN+LGDG V+ + +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 375 QEAGE-FAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIFRATEQWFA 433
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--I 702
+ EAL + V ++P + +R +A+R WCISRQR WGVPIPVFYD T
Sbjct: 434 SVAGFRDEALKAIASVKWIPAQGENRIRPMVAERSDWCISRQRSWGVPIPVFYDEATGEP 493
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWS 760
++NE +I H +I E G D WW +SVE+LL S ++ + K D +D+WFDSG SW+
Sbjct: 494 LLNEESINHVQGIIAEKGSDAWWEMSVEELLPESYRHNGKSYRKGTDTMDVWFDSGSSWA 553
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V+K + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE+G KM
Sbjct: 554 AVVKQRPELRYPADMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEQGRKM 613
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKSVGNV+ + G K KK P YG D+LR W A+
Sbjct: 614 SKSVGNVVDPQIVINGGKD--------------------QKKEPPYGADILRLW-ASSVD 652
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLC 931
V +G I+ D KIR++ R+LLG L + ++ +D YML R+
Sbjct: 653 YSSDVRLGGTIIKQMNDVRGKIRNTARFLLGSLDDFDPVKDAVPLSDLPELDRYMLHRMT 712
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
E + + FQ+ R + +LNF V +LS FY + KDRLY S + R S L
Sbjct: 713 EVFEEVTAAFDSFQFFRFFQTVLNFCVVDLSNFYLDVAKDRLYISSPDAFRRRSCQTVLQ 772
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L R +AP++ H AE+++ +P
Sbjct: 773 IALENLARAIAPVLCHTAEDIWQFIP 798
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/394 (45%), Positives = 240/394 (60%), Gaps = 20/394 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R LLQG++V YV GWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLQGRKVRYVAGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ + L+PL +R+KAK FAL T++ Q F+ +G+ DWEH Y T EY Q+
Sbjct: 113 KSAERQSLTPLKLRQKAKEFALATVDDQLECFKRYGIWGDWEHP-YLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH----L 192
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY + + L
Sbjct: 172 FGQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPITGLSEAAKPVL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-------VIVAKCLVESL 245
E L IWTTTPW++P N +A N L YSV V + +IVA LVE L
Sbjct: 232 GEFLPHLGVAIWTTTPWTIPGNLAVAVNGDLNYSVVEVSRRDAEAQSEFLIVATDLVERL 291
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
T ++ V F GQ L+ TY HP+ + + ++ ++++ GTGLVH AP HGQ
Sbjct: 292 AATLDAELAVRATFKGQVLEHSTYRHPLFDRESPV-VVGGDYITTESGTGLVHTAPGHGQ 350
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
+D+++ +P+L + + G ++ +AG GLN+LGDG V+ + +L E Y
Sbjct: 351 EDYIVGQRYGLPILAPVDDNGDFTQEAGE-FAGLNVLGDGNQAVIDALTAAGSLLKEEAY 409
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YPYDWRTKKP I +A++QWF + EAL
Sbjct: 410 AHKYPYDWRTKKPTIFRATEQWFASVAGFRDEAL 443
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I
Sbjct: 367 VDDNGDFTQEAGE-FAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIF 425
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + EAL + V ++P + +R +A+R WCISRQR WGVPIPVF
Sbjct: 426 RATEQWFASVAGFRDEALKAIASVKWIPAQGENRIRPMVAERSDWCISRQRSWGVPIPVF 485
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
YD T ++NE +I H +I E G D WW + VE+LL S
Sbjct: 486 YDEATGEPLLNEESINHVQGIIAEKGSDAWWEMSVEELLPES 527
>gi|148243311|ref|YP_001228468.1| isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
gi|147851621|emb|CAK29115.1| Isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
Length = 959
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/624 (37%), Positives = 336/624 (53%), Gaps = 47/624 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHAL---IWTTTPWSLPANQFI 474
TALAE+ELEY H S S+++ + Q+ + L E L IWTTTPW+LPAN +
Sbjct: 197 TALAEAELEYPDGHTSPSVFVAFPVEQLSSALAEAGVSCEGLAVAIWTTTPWTLPANLAV 256
Query: 475 AFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
A N L+YS+ S G +IVA LVE+L + + + G+ L+ +TY HP+ E
Sbjct: 257 AVNGRLDYSICQSSSGGQLIVASDLVESLSQQLELKLKPLQQVKGEALEGLTYRHPL-LE 315
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+ ++ ++++ GTGLVH AP HG DDF +PVL + G + +AGP
Sbjct: 316 RSSPVVIGGDYITTEAGTGLVHTAPGHGVDDFNTGRKYDLPVLCPVDEGGWLTEEAGP-F 374
Query: 594 EGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
GLN+L D ++ ++ +L E Y+H YPYDWRTKKP I +A++QWF E +
Sbjct: 375 AGLNVLKDANTAIISALQEAKALLAEERYEHRYPYDWRTKKPTIFRATEQWFASVEGFRE 434
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
AL+ ++ V ++P S + + + R WCISRQR WGVPIPVFY +++N +
Sbjct: 435 SALSAIDSVEWLPASGRNRIEGMVRDRGDWCISRQRTWGVPIPVFYHRTSGEVLLNADTL 494
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
+H LI EHG D WW LL + D K D +D+WFDSG SW+ VL
Sbjct: 495 QHIQALIAEHGADIWWERDEADLLPPAYRDQADQWRKGTDTMDVWFDSGSSWAGVLGGLE 554
Query: 765 -------DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
+ PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DEKG KMSK
Sbjct: 555 AEADTSLNYPADLYLEGSDQHRGWFQSSLLTSVAVNGKAPYKRVLTHGFTLDEKGRKMSK 614
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNV+ I +G K K+ P YG DVLR WV++
Sbjct: 615 SLGNVVDPAVIVEGGKN--------------------QKQEPPYGADVLRLWVSS-VDYS 653
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
VP+G I+ D +K+R++ RYLLG LH+ S ++ +D +ML+R +
Sbjct: 654 ADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPSRDAVPLADLPLLDRWMLQRTAKI 713
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + +++ R + L NF V +LS Y + KDRLY + + R S + +
Sbjct: 714 LEEVSGDFERYEFYRFFQTLQNFCVVDLSNVYLDIAKDRLYVSAADSFRRRSCQTVMALV 773
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLP 1017
L +AP++ H+AE+++ HLP
Sbjct: 774 LERLAGMIAPVLSHMAEDIWQHLP 797
Score = 326 bits (835), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/392 (43%), Positives = 235/392 (59%), Gaps = 13/392 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK LKDI + L+QGK+ Y+PGWDCHGLPIELK
Sbjct: 49 NPGPVFTLHDGPPYANGALHVGHALNKTLKDIINKVQLMQGKKARYIPGWDCHGLPIELK 108
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + + L PL++R+KA +A + + Q+ F WG+ +W+ Y T K Y
Sbjct: 109 VLQSLKAEERRELKPLELRRKAHAYAEQQVEGQRQGFRRWGIWGEWDIP-YLTLQKRYEA 167
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
+Q+ F + +IYR LKPV+WSPSSRTALAE+ELEY H S S+++ + Q+ +
Sbjct: 168 SQIDVFGRMVLAGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVFVAFPVEQLSSA 227
Query: 192 LLEGATDLHAL---IWTTTPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVESLKW 247
L E L IWTTTPW+LPAN +A N L+YS+ S G +IVA LVESL
Sbjct: 228 LAEAGVSCEGLAVAIWTTTPWTLPANLAVAVNGRLDYSICQSSSGGQLIVASDLVESLSQ 287
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
+ ++ + G+ L+ +TY HP+ E+ ++ ++++ GTGLVH AP HG DD
Sbjct: 288 QLELKLKPLQQVKGEALEGLTYRHPL-LERSSPVVIGGDYITTEAGTGLVHTAPGHGVDD 346
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQH 365
F +PVL + G + +AGP GLN+L D ++ ++ +L E Y+H
Sbjct: 347 FNTGRKYDLPVLCPVDEGGWLTEEAGP-FAGLNVLKDANTAIISALQEAKALLAEERYEH 405
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YPYDWRTKKP I +A++QWF E + AL
Sbjct: 406 RYPYDWRTKKPTIFRATEQWFASVEGFRESAL 437
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ ++ +L E Y+H YPYDWRTKKP I
Sbjct: 361 VDEGGWLTEEAGP-FAGLNVLKDANTAIISALQEAKALLAEERYEHRYPYDWRTKKPTIF 419
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + AL+ ++ V ++P S + + + R WCISRQR WGVPIPVF
Sbjct: 420 RATEQWFASVEGFRESALSAIDSVEWLPASGRNRIEGMVRDRGDWCISRQRTWGVPIPVF 479
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +++N ++H LI EHG D WW LL
Sbjct: 480 YHRTSGEVLLNADTLQHIQALIAEHGADIWWERDEADLL 518
>gi|298712913|emb|CBJ33425.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 1060
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/626 (37%), Positives = 347/626 (55%), Gaps = 49/626 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H S S+Y ++ + L + L +WTTTPW+LPAN +
Sbjct: 267 TALAEAELEYPAGHTSTSVYAAFEVKEATPALEKYMGSGGGLAVSVWTTTPWTLPANLAV 326
Query: 475 AFNPALEYSV---ASVKGANVIVAKCLVENLKWTFQTD----IDVVCDFPGQYLQDITYI 527
A + + YSV AS+ ++VA LV + + + VV F G+ L Y
Sbjct: 327 AVSETIRYSVVEHASLGDRKLLVATDLVGAVSAKIGLEEGDTLKVVETFTGKDLIGTKYQ 386
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
HP+ ++ ++ ++++ GTGLVH AP HGQ+D++ +P+L+ + + G+++
Sbjct: 387 HPLCDRVSEV-VVGGDYITTETGTGLVHTAPGHGQEDYVTGQKYGLPLLSPVDDAGRFTV 445
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
+AG +GLN+L +G ++VL +E +L E YQH YPYDWRTKKP I +A+ QWF
Sbjct: 446 EAGDRFKGLNVLKEGNEEVLVALEEAGGLLAREAYQHKYPYDWRTKKPTIFRATDQWFAS 505
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTI 702
+R + AL+ +E+V ++PE ++ + + R WCISRQR WG+PIPVFY+ G+ +
Sbjct: 506 VDRFRDTALSAIEKVQWIPEVGQRRITTMVEGRNDWCISRQRSWGLPIPVFYNIESGEPM 565
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWS 760
+ E+ I+H ++ EHG D WW + V LL S + D +D+WFDSG SW+
Sbjct: 566 LTTES-IEHIRAIVAEHGSDAWWEMEVADLLPPSLQGEADQWRRGTDTMDVWFDSGSSWA 624
Query: 761 HVLK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V K D PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG KM
Sbjct: 625 GVAKAREELDYPADLYLEGSDQHRGWFQSSLLTSVAANGHAPYKTVLTHGFVLDEKGYKM 684
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GN + ++ +G GN K+ PAYG DVLR WV++
Sbjct: 685 SKSLGNTLDPTEVIEG-----------GN---------NKKQKPAYGADVLRLWVSS-VD 723
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLC 931
V +G I+ + + +K+R++LRYL G L + S+ +D YML L
Sbjct: 724 YSGDVCVGDQIIKQASESYRKLRNTLRYLTGSLFDFDPEKDSVPYEDLPSLDKYMLGMLS 783
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
++ + +Q+ +AS+VL F +LS FY KDRLY S + R S LH
Sbjct: 784 SVLEEVENAFDGYQFYKASQVLQRFATADLSNFYLDGAKDRLYISSSDDFRRRSCQTVLH 843
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ L +API+PH+AE+V+ LP
Sbjct: 844 TMLMSLSTAMAPILPHMAEDVWQTLP 869
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 242/398 (60%), Gaps = 18/398 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N +++LHDGPPYANG HIGHA+NKILKD R +L+G++V YVPGWDCHGLPIELK
Sbjct: 119 NTGEKYVLHDGPPYANGDLHIGHALNKILKDFINRYQMLRGRKVGYVPGWDCHGLPIELK 178
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + + ++P+ +RKKA FA T++ Q A F +GV D+E Y T EY
Sbjct: 179 VLQSMKSNERRGMTPVQLRKKAAEFARNTVSKQSASFRRYGVWGDFE-KPYLTLQPEYEA 237
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F ++ + +I+R KPV WSPSSRTALAE+ELEY H S S+Y ++ +
Sbjct: 238 AQIEVFGKMFTEGHIFRGRKPVNWSPSSRTALAEAELEYPAGHTSTSVYAAFEVKEATPA 297
Query: 192 L---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV---ASVKGANVIVAKCLVESL 245
L + L +WTTTPW+LPAN +A + + YSV AS+ ++VA LV ++
Sbjct: 298 LEKYMGSGGGLAVSVWTTTPWTLPANLAVAVSETIRYSVVEHASLGDRKLLVATDLVGAV 357
Query: 246 KWTFQTD----IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
+ ++VV F G+ L Y HP+ ++ ++ ++++ GTGLVH AP
Sbjct: 358 SAKIGLEEGDTLKVVETFTGKDLIGTKYQHPLCDRVSEV-VVGGDYITTETGTGLVHTAP 416
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLW 359
HGQ+D++ +P+L+ + + G+++ +AG +GLN+L +G ++VL +E +L
Sbjct: 417 GHGQEDYVTGQKYGLPLLSPVDDAGRFTVEAGDRFKGLNVLKEGNEEVLVALEEAGGLLA 476
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E YQH YPYDWRTKKP I +A+ QWF +R + AL
Sbjct: 477 REAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDTAL 514
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 6/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + + G+++ +AG +GLN+L EG ++VL +E +L E YQH YPYDWRTKKP
Sbjct: 434 LSPVDDAGRFTVEAGDRFKGLNVLKEGNEEVLVALEEAGGLLAREAYQHKYPYDWRTKKP 493
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A+ QWF +R + AL+ +E V ++PE ++ + + R WCISRQR WG+PI
Sbjct: 494 TIFRATDQWFASVDRFRDTALSAIEKVQWIPEVGQRRITTMVEGRNDWCISRQRSWGLPI 553
Query: 1224 PVFYD---GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY+ G+ ++ E+ I+H ++ EHG D WW + V LL
Sbjct: 554 PVFYNIESGEPMLTTES-IEHIRAIVAEHGSDAWWEMEVADLL 595
>gi|10177193|dbj|BAB10327.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
Length = 988
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/622 (38%), Positives = 347/622 (55%), Gaps = 46/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL--NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY HISKSIY KL + L E +++ +WTTTPW++PAN +A
Sbjct: 206 TALAEAELEYPEGHISKSIYAIFKLVGGAKTSLLDEFIPNIYLAVWTTTPWTMPANAAVA 265
Query: 476 FNPALEYSVASVKGAN-----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
N L+YSV V+ N VIVA LV L+ + + + F G L++ Y HPI
Sbjct: 266 VNAKLQYSVVEVQSFNQQKLFVIVATDLVPALEAKWGVKLSISKTFLGSDLENCRYTHPI 325
Query: 531 NKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
+ RD ++ G ++++ GTGLVH AP HGQ+D+ L +P+++ + ++GK++ +A
Sbjct: 326 D--NRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPLVSPVDDEGKFTEEA 383
Query: 590 GPGLEGLNILGDGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G GL++LG+G V+ ++ ++ + E+Y H YPYDWRTKKP I +A++QWF E
Sbjct: 384 GQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATEQWFASVE 442
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVN 705
+ + + V +VP A + + R WCISRQR WGVPIP FY T ++N
Sbjct: 443 GFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQRTWGVPIPAFYHVKTKEPLMN 502
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
E I H ++I + G D WW +SVE LL D ++ K D +D+WFDSG SW+ VL
Sbjct: 503 EETINHVKSIISQKGSDAWWYMSVEDLLPEKYRDKAADYEKGTDTMDVWFDSGSSWAGVL 562
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA VY+EG DQ GWF SSLLTS+A + AP+ V HGFV+DEKG KMSKS
Sbjct: 563 GKREGLSFPADVYLEGTDQHRGWFQSSLLTSIATQGKAPYSAVITHGFVLDEKGMKMSKS 622
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNV+ + +G K +K PAYG DV+R WV++
Sbjct: 623 LGNVVDPRLVIEGGKN--------------------SKDAPAYGADVMRLWVSS-VDYTG 661
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR---YVDVYMLKRLCEFQN 935
V IG IL D +K+R +LRYLLG LH+ + +D + L +L
Sbjct: 662 DVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNAVPYQDLPIIDQHALFQLENVVK 721
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +Q+ + +++ F + +LS FYF + KDRLY + R S L
Sbjct: 722 NIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRLYTGGTSSFTRRSCQTVLSTHLL 781
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+LR +API+PHLAE+V+ +LP
Sbjct: 782 SILRVIAPIVPHLAEDVWQNLP 803
Score = 312 bits (799), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/396 (45%), Positives = 248/396 (62%), Gaps = 18/396 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +V YVPGWDCHGLPIELK
Sbjct: 58 NNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYVPGWDCHGLPIELK 117
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+PL +R KA FA T+ TQ F+ +GV ADW +N Y T D EY
Sbjct: 118 VLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFKRFGVWADW-NNPYLTLDPEYEA 176
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL--NQVP 189
Q+ F + + YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY KL
Sbjct: 177 AQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFKLVGGAKT 236
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-----VIVAKCLVES 244
+ L E +++ +WTTTPW++PAN +A N L+YSV V+ N VIVA LV +
Sbjct: 237 SLLDEFIPNIYLAVWTTTPWTMPANAAVAVNAKLQYSVVEVQSFNQQKLFVIVATDLVPA 296
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAH 303
L+ + + + F G L++ Y HPI+ RD ++ G ++++ GTGLVH AP H
Sbjct: 297 LEAKWGVKLSISKTFLGSDLENCRYTHPID--NRDCPVVIGGDYITTESGTGLVHTAPGH 354
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV--LWTE 361
GQ+D+ L +P+++ + ++GK++ +AG GL++LG+G V+ ++ ++ + E
Sbjct: 355 GQEDYATGLKYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEE 413
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y H YPYDWRTKKP I +A++QWF E + +
Sbjct: 414 SYAHKYPYDWRTKKPTIFRATEQWFASVEGFRTATM 449
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVIL 1166
+ ++GK++ +AG GL++LGEG V+ ++ ++ + E+Y H YPYDWRTKKP I
Sbjct: 373 VDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIF 431
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + + + V +VP A + + R WCISRQR WGVPIP F
Sbjct: 432 RATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQRTWGVPIPAF 491
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y T ++NE I H ++I + G D WW + VE LL
Sbjct: 492 YHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLL 530
>gi|308802504|ref|XP_003078565.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
gi|116057018|emb|CAL51445.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
Length = 1011
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/619 (37%), Positives = 345/619 (55%), Gaps = 42/619 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP----AHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY+ +++VP + L + D IWTTTPW++PAN
Sbjct: 240 TALAEAELEYPEGHFSQSIYVAFPVSEVPDSTPSALRDLLKDASLAIWTTTPWTMPANAA 299
Query: 474 IAFNPALEYSVASVK--GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+A N L+YSV V+ G ++VA+ L E + ++++ + F GQ +++ Y HP
Sbjct: 300 VAVNAKLDYSVCRVESTGKTLVVAEGLREAVAAKLESELTTLGTFKGQDFENVQYSHPFY 359
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
E++ ++ ++++ GTGLVH AP HGQDD++ + +P+ + + N G ++ +AG
Sbjct: 360 -ERKSPVIIGGEYITTETGTGLVHTAPGHGQDDYISGMKYGLPLYSPVDNAGLFTAEAGG 418
Query: 592 GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
LEG ++LGDG + +E +L E Y H YPYDWRTKKP I +A++QWF E
Sbjct: 419 DLEGKDVLGDGNVLCIEKLETAGALLKREKYGHKYPYDWRTKKPTIFRATEQWFASVEGF 478
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
+ +AL L+++ F+PES K +R ++ R WCISRQR WGVPIP FY DT ++++EA
Sbjct: 479 REDALKELDKLQFIPESGSKRMRPMVSGRADWCISRQRAWGVPIPAFYHKDTNEVLMDEA 538
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
IKH ++ G + WW L VE LL + D +D+WFDSG SW+ V+K
Sbjct: 539 IIKHVTEIVRAKGTNAWWELEVEDLLPEEHKAKAGEYVRGTDTMDVWFDSGSSWAGVVKT 598
Query: 766 K----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+ PA VY+EG DQ GWF SSLLT V AP++ + HGFV+DEKG KMSKS+GN
Sbjct: 599 RGMSFPADVYLEGSDQHRGWFQSSLLTGVGAMGQAPYKTILTHGFVLDEKGYKMSKSLGN 658
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + +G K K+ P YG D LR WVA+ V
Sbjct: 659 VIDPRTVIEGGKN--------------------QKQEPGYGADTLRLWVAS-TDYSGDVS 697
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYVDVYMLKRLCEFQNTMD 938
IG NI+ + + +K+R ++R+ +GVL + + + D Y+L RL ++
Sbjct: 698 IGMNIIKQTSEAYRKLRGTIRFAMGVLDDFNPAQQVPYDDLPVFDKYVLHRLNATVKEIE 757
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ Y F Y+R + +F LS Y + KD+LY + + R + + + ++
Sbjct: 758 SSYKAFDYSRVVSAVTSFTTF-LSNVYLDVSKDKLYIGAQDDFKRRACQTVVSALVERII 816
Query: 999 RTVAPIMPHLAEEVYSHLP 1017
+AP+ PH+AEE + LP
Sbjct: 817 AAIAPLTPHMAEEAFQALP 835
Score = 332 bits (850), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/389 (44%), Positives = 249/389 (64%), Gaps = 14/389 (3%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
F+LHDGPPYANG HIGHA+NKILKD R ++ GK+V +VPGWDCHGLPIELK + S
Sbjct: 97 FVLHDGPPYANGDLHIGHALNKILKDFVNRWEMMNGKKVRFVPGWDCHGLPIELKVLQSM 156
Query: 81 D----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
D K L+P+ +R KAK FA +T+ Q+ +F+ +GV ADWE + Y T EY Q+
Sbjct: 157 DAEARKNLTPIKLRYKAKAFAEKTVKAQREQFKRYGVWADWE-DPYMTLLPEYEAAQMEV 215
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV----PAHL 192
F +++ +IYR KPV+WSPSS TALAE+ELEY H S+SIY+ +++V P+ L
Sbjct: 216 FGSMFLNGHIYRGKKPVHWSPSSMTALAEAELEYPEGHFSQSIYVAFPVSEVPDSTPSAL 275
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK--GANVIVAKCLVESLKWTFQ 250
+ D IWTTTPW++PAN +A N L+YSV V+ G ++VA+ L E++ +
Sbjct: 276 RDLLKDASLAIWTTTPWTMPANAAVAVNAKLDYSVCRVESTGKTLVVAEGLREAVAAKLE 335
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
+++ + F GQ +++ Y HP E++ ++ ++++ GTGLVH AP HGQDD++
Sbjct: 336 SELTTLGTFKGQDFENVQYSHPFY-ERKSPVIIGGEYITTETGTGLVHTAPGHGQDDYIS 394
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYP 368
+ +P+ + + N G ++ +AG LEG ++LGDG + +E +L E Y H YP
Sbjct: 395 GMKYGLPLYSPVDNAGLFTAEAGGDLEGKDVLGDGNVLCIEKLETAGALLKREKYGHKYP 454
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
YDWRTKKP I +A++QWF E + +AL
Sbjct: 455 YDWRTKKPTIFRATEQWFASVEGFREDAL 483
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ N G ++ +AG LEG ++LG+G + +E +L E Y H YPYDWRTKKP I
Sbjct: 406 VDNAGLFTAEAGGDLEGKDVLGDGNVLCIEKLETAGALLKREKYGHKYPYDWRTKKPTIF 465
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL L+ + F+PES K +R ++ R WCISRQR WGVPIP F
Sbjct: 466 RATEQWFASVEGFREDALKELDKLQFIPESGSKRMRPMVSGRADWCISRQRAWGVPIPAF 525
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y DT ++++EA IKH ++ G + WW L VE LL
Sbjct: 526 YHKDTNEVLMDEAIIKHVTEIVRAKGTNAWWELEVEDLL 564
>gi|428214247|ref|YP_007087391.1| isoleucyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
gi|428002628|gb|AFY83471.1| Isoleucyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
Length = 1145
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/629 (37%), Positives = 343/629 (54%), Gaps = 56/629 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHAL-------IWTTTPWSLPA 470
TALAE+ELEY H S+SIY ++ + L + A+DL A IWTTTPW++P
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFQITK----LADTASDLKAYMKQLWVGIWTTTPWTIPG 251
Query: 471 NQFIAFNPALEYSVASV-------KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
N ++ NP LEY+V G +IVA LV+ L T T + V G+ L+
Sbjct: 252 NLAVSVNPQLEYAVVETAADYEPASGKFLIVAAELVDRLSETLGTSLTVKAKIKGKDLEG 311
Query: 524 ITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 583
Y HP+ + ++ +V++ GTGLVH AP HG +D+ + +P+L + G
Sbjct: 312 CEYKHPLCDRTSPV-VIGGDYVTTESGTGLVHTAPGHGLEDYQVGQRYGLPILAPVDGNG 370
Query: 584 KYSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQ 641
++ +AG GLN+L +G V+ ++ +L E Y H YPYDWRTKKP I +A++Q
Sbjct: 371 NFTEEAGE-FAGLNVLDEGNTAVIEALKTAKSLLKEEPYVHKYPYDWRTKKPTIFRATEQ 429
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
WF + + EA+ + EV +VP + ++ +++R WCISRQR WGVPIPVFY+ +T
Sbjct: 430 WFASVDGFREEAMKAISEVKWVPAQGENRIKGMVSERSDWCISRQRSWGVPIPVFYEEET 489
Query: 702 --IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGI 757
++ E I H ++ E G D WW L +E LL ++ T K D +D+WFDSG
Sbjct: 490 GEPLMTEETIAHVQAIVAEKGSDAWWELPIEDLLPEPYRSNGKTYRKGTDTMDVWFDSGS 549
Query: 758 SWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKG 812
SW+ V+ + PA +Y+EG DQ GWF SSLLTSVA AP+++V HGFV+DE
Sbjct: 550 SWAAVVGGREELRYPADLYLEGSDQHRGWFQSSLLTSVANNSIAPYKSVLTHGFVLDENN 609
Query: 813 AKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA 872
KMSKS+GNV+ I G K+ P YG DVLR WV++
Sbjct: 610 RKMSKSLGNVVDPATIINGGSN--------------------QKQEPPYGADVLRLWVSS 649
Query: 873 HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLK 928
VPIGKNIL D +KIR++ R+LLG L + + ++ +D YML
Sbjct: 650 -VDYSSDVPIGKNILKQLSDVYRKIRNTARFLLGNLEDFDPAKDAVPYEELPELDRYMLH 708
Query: 929 RLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLH 988
R+ E + + +Q+ R + + NF V +LS FY + KDRLY +++ + R S
Sbjct: 709 RMTEIFAEVTDAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAVDAKRRRSCQT 768
Query: 989 TLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L L + VAP++ H+AE+++ +LP
Sbjct: 769 VLAIALENLAKAVAPVLCHIAEDIWQNLP 797
Score = 322 bits (826), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/397 (43%), Positives = 242/397 (60%), Gaps = 27/397 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK---AI 77
FILHDGPPYANG+ H+GHA+NK+LKDI + LL+G +V YVPGWDCHGLPIELK A+
Sbjct: 53 FILHDGPPYANGSLHMGHALNKVLKDIINKYKLLRGHQVRYVPGWDCHGLPIELKVLQAM 112
Query: 78 TSKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SK++ L+PL +R+KA+ FAL+T+ QK F+ +G+ DWE N Y T EY Q+
Sbjct: 113 KSKERQNLTPLTLRQKAQEFALKTVEEQKESFKRYGIWGDWE-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F + + YIYR KPV+WSPSS+TALAE+ELEY H S+SIY ++ + L + A
Sbjct: 172 FGKMVLKGYIYRGRKPVHWSPSSQTALAEAELEYPEGHTSRSIYAAFQITK----LADTA 227
Query: 197 TDLHAL-------IWTTTPWSLPANQFIAFNPALEYSVASV-------KGANVIVAKCLV 242
+DL A IWTTTPW++P N ++ NP LEY+V G +IVA LV
Sbjct: 228 SDLKAYMKQLWVGIWTTTPWTIPGNLAVSVNPQLEYAVVETAADYEPASGKFLIVAAELV 287
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ L T T + V G+ L+ Y HP+ + ++ +V++ GTGLVH AP
Sbjct: 288 DRLSETLGTSLTVKAKIKGKDLEGCEYKHPLCDRTSPV-VIGGDYVTTESGTGLVHTAPG 346
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWT 360
HG +D+ + +P+L + G ++ +AG GLN+L +G V+ ++ +L
Sbjct: 347 HGLEDYQVGQRYGLPILAPVDGNGNFTEEAGE-FAGLNVLDEGNTAVIEALKTAKSLLKE 405
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y H YPYDWRTKKP I +A++QWF + + EA+
Sbjct: 406 EPYVHKYPYDWRTKKPTIFRATEQWFASVDGFREEAM 442
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ +AG GLN+L EG V+ ++ +L E Y H YPYDWRTKKP I
Sbjct: 366 VDGNGNFTEEAGE-FAGLNVLDEGNTAVIEALKTAKSLLKEEPYVHKYPYDWRTKKPTIF 424
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + EA+ + V +VP + ++ +++R WCISRQR WGVPIPVF
Sbjct: 425 RATEQWFASVDGFREEAMKAISEVKWVPAQGENRIKGMVSERSDWCISRQRSWGVPIPVF 484
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y+ +T ++ E I H ++ E G D WW LP+E LL
Sbjct: 485 YEEETGEPLMTEETIAHVQAIVAEKGSDAWWELPIEDLL 523
>gi|257061171|ref|YP_003139059.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
gi|256591337|gb|ACV02224.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
Length = 959
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 353/642 (54%), Gaps = 49/642 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK---IKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SI+ IK ++ +L+ ++L IWTTTPW+LP N
Sbjct: 196 TALAEAELEYPEGHTSQSIFAAFPIIKSSKDAQEILDPFLSNLGVAIWTTTPWTLPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYI 527
+A NP L Y++ + +N +IVA LVE L TF T++ V PGQ L+ Y
Sbjct: 256 VALNPELTYAIVE-QTSNLCNYQYIIVAADLVERLSATFSTELTVKATLPGQILEHTIYR 314
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
HP+ + ++ ++ +V++ GTGLVH AP HGQ+D+++ + VL+ + + G ++
Sbjct: 315 HPLYDRESEI-VIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLQVLSPVDDAGNFTE 373
Query: 588 DAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
+AG GLN+L D +++ ++ +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 374 EAGQ-FAGLNVLKDANQAIINELKNKGSLLKEEPYLHKYPYDWRTKKPTIFRATEQWFAS 432
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
E + AL ++ V ++P + + ++ R WCISRQR WGVPIPVFY+ +T +
Sbjct: 433 VEGFREAALEAIKAVTWIPPQGENRITPMVSDRSDWCISRQRSWGVPIPVFYNEETNEPL 492
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSH 761
+ E I H +I + G D WW LS+E+LL + D +D+WFDSG SW+
Sbjct: 493 LTEETINHVQAIIAKQGSDAWWELSIEELLPEQYKKDAHKYRRGTDTMDVWFDSGSSWAA 552
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMS
Sbjct: 553 VAKQREELKYPVDIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGHKMS 612
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN++ I G K K+ P YG DVLR WV++
Sbjct: 613 KSLGNIVDPLVIINGGK--------------------NQKQEPPYGADVLRLWVSS-VDY 651
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
VPIG+ IL D +KIR++ R+LLG LH+ ++S +D YML R+ E
Sbjct: 652 SSDVPIGQTILKQLSDVYRKIRNTARFLLGNLHDFDPEKNTVSYEQLPELDQYMLHRITE 711
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + +FQ+ R + + NF V +LS FY + KDRLY N R S L
Sbjct: 712 VFTEVTDAFEKFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISDTNSLRRRSCQTVLKV 771
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQ 1034
L + +AP++ H+AE+++ LP + S F V +Q
Sbjct: 772 AVESLAKAIAPVLCHMAEDIWQFLPYKTPYQSVFASGWVEMQ 813
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 247/393 (62%), Gaps = 20/393 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG+ H+GHA+NK LKDI + LL+G +V YVPGWDCHGLPIELK + S
Sbjct: 53 FILHDGPPYANGSLHMGHALNKTLKDIINKYKLLRGHKVRYVPGWDCHGLPIELKVLQSM 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+PL +R+KA++FAL+T Q F+ +GV DWE N Y T EY Q+
Sbjct: 113 KSEEREGLTPLKLRRKARDFALKTQQEQAEGFKRYGVWGDWE-NPYLTLTPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK---IKLNQVPAHLL 193
F + + YIYR LKPV+WSPSSRTALAE+ELEY H S+SI+ IK ++ +L
Sbjct: 172 FGQMALKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSQSIFAAFPIIKSSKDAQEIL 231
Query: 194 EG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------VIVAKCLVESLK 246
+ ++L IWTTTPW+LP N +A NP L Y++ + +N +IVA LVE L
Sbjct: 232 DPFLSNLGVAIWTTTPWTLPGNLAVALNPELTYAIVE-QTSNLCNYQYIIVAADLVERLS 290
Query: 247 WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
TF T++ V PGQ L+ Y HP+ + ++ ++ +V++ GTGLVH AP HGQ+
Sbjct: 291 ATFSTELTVKATLPGQILEHTIYRHPLYDRESEI-VIGGDYVTTESGTGLVHTAPGHGQE 349
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV--EPDVLWTENYQ 364
D+++ + VL+ + + G ++ +AG GLN+L D +++ + + +L E Y
Sbjct: 350 DYIVGQRYGLQVLSPVDDAGNFTEEAGQ-FAGLNVLKDANQAIINELKNKGSLLKEEPYL 408
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YPYDWRTKKP I +A++QWF E + AL
Sbjct: 409 HKYPYDWRTKKPTIFRATEQWFASVEGFREAAL 441
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ +AG GLN+L + +++ ++ +L E Y H YPYDWRTKKP
Sbjct: 362 LSPVDDAGNFTEEAGQ-FAGLNVLKDANQAIINELKNKGSLLKEEPYLHKYPYDWRTKKP 420
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL ++ V ++P + + ++ R WCISRQR WGVPI
Sbjct: 421 TIFRATEQWFASVEGFREAALEAIKAVTWIPPQGENRITPMVSDRSDWCISRQRSWGVPI 480
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY+ +T ++ E I H +I + G D WW L +E+LL
Sbjct: 481 PVFYNEETNEPLLTEETINHVQAIIAKQGSDAWWELSIEELL 522
>gi|405972680|gb|EKC37436.1| Isoleucyl-tRNA synthetase, mitochondrial [Crassostrea gigas]
Length = 724
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/586 (41%), Positives = 343/586 (58%), Gaps = 76/586 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLH--------ALIWTTTPWSLP 469
TALAE+ELEY P +SK++Y+K V A LE L+ ALIWTTTPW+LP
Sbjct: 184 TALAEAELEYDPGFVSKAVYVKFP---VTADTLEACFSLNDAENSQVFALIWTTTPWTLP 240
Query: 470 ANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDF---PGQYLQDITY 526
AN+ I F L Y CLV+NL D +C+ G +D Y
Sbjct: 241 ANEAICFGSDLTY--------------CLVKNL----CNDELYICNCFSPIGSAFKDFKY 282
Query: 527 IHPINK------EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLIT 580
I+P+ + + ++L L V++ GTGLVH APAHGQ+DF + +PV L+
Sbjct: 283 INPLKQLMDPSMDVQELPFLEGDHVTADVGTGLVHTAPAHGQEDFQKGMQYGLPVDTLVD 342
Query: 581 NQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQ 640
G+Y+ + GP LEG + D +D V+ L++ ++ E+Y+HSYP DWRTKKPVIL+A +
Sbjct: 343 ETGRYTSETGPLLEGKRVHVDAEDTVISLLKDHIILQESYKHSYPIDWRTKKPVILRACK 402
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 700
QWFIDT +++ +A+ C++++ PES ++ + Q+ +R YWCISRQRVWGVPIPVFY D
Sbjct: 403 QWFIDTSKLQQQAMECMKDIKVYPESLRQNMDAQL-KRKYWCISRQRVWGVPIPVFYHRD 461
Query: 701 T--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-------NTSDVNSNVTKSNDILDI 751
T +++N H LI +H D WW++SVE+LL N +S+ K +DI+DI
Sbjct: 462 TEEVLINREIFDHVRDLISKHSSDCWWNMSVEELLPQEILSRNGLGNSSDYRKGSDIIDI 521
Query: 752 WFDSGISWSHVLK-DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
WFDSG SW+ VL DK A VY+EG+DQ GWF SSLLTSVA + APF+ + +HGF VDE
Sbjct: 522 WFDSGTSWASVLSDDKVADVYLEGLDQFRGWFQSSLLTSVAYRGKAPFKKLVVHGFAVDE 581
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
+G KM+KSVGNV+ G +I+ H G +P YG+DVLR WV
Sbjct: 582 EGHKMAKSVGNVVDP-----------------GQIINGHSKATG---IP-YGLDVLRLWV 620
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLH----NHSESTGSISRYVDVYM 926
A++ V IG NIL+ Q+++ ++R LR+LLG L N ++ S D Y+
Sbjct: 621 -ANSGLQTKVAIGTNILDIHQEELFQLRKMLRHLLGSLRGFDVNILQTNYSDLLPQDQYL 679
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
L L + + ++Y E+++ R +L F +++LS Y T+ KDR
Sbjct: 680 LSLLYSYGTQVTSMYEEYRFGRVLTLLQKF-LSDLSKVYITISKDR 724
Score = 322 bits (825), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/376 (46%), Positives = 231/376 (61%), Gaps = 39/376 (10%)
Query: 42 KILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT-SKDKLLSPLDIRKKAKNFALET 100
K+LKDI R NLLQG RVHYVPGWDCHGLPIELKA+ SK + LS IR +K FA E+
Sbjct: 64 KVLKDIINRYNLLQGYRVHYVPGWDCHGLPIELKALKKSKKQTLSDQSIRAMSKTFAEES 123
Query: 101 INTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSR 160
I QK F+ +GV+ADWE CY T D Y QL FY +Y+++ IY+ PVYWSPSSR
Sbjct: 124 IQVQKEGFQEYGVMADWEGQCYRTMDPLYEAQQLDVFYAMYEKELIYQGYMPVYWSPSSR 183
Query: 161 TALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATDLH--------ALIWTTTPWSLP 212
TALAE+ELEY P VSK++Y+K V A LE L+ ALIWTTTPW+LP
Sbjct: 184 TALAEAELEYDPGFVSKAVYVKFP---VTADTLEACFSLNDAENSQVFALIWTTTPWTLP 240
Query: 213 ANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEVVCDF---PGQYLQDITY 269
AN+ I F L Y CLV++L D +C+ G +D Y
Sbjct: 241 ANEAICFGSDLTY--------------CLVKNL----CNDELYICNCFSPIGSAFKDFKY 282
Query: 270 IHPINK------EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLIT 323
I+P+ + + ++L L V++ GTGLVH APAHGQ+DF + +PV L+
Sbjct: 283 INPLKQLMDPSMDVQELPFLEGDHVTADVGTGLVHTAPAHGQEDFQKGMQYGLPVDTLVD 342
Query: 324 NQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQ 383
G+Y+ + GP LEG + D +D V+ L++ ++ E+Y+HSYP DWRTKKPVIL+A +
Sbjct: 343 ETGRYTSETGPLLEGKRVHVDAEDTVISLLKDHIILQESYKHSYPIDWRTKKPVILRACK 402
Query: 384 QWFIDTERIKPEALVC 399
QWFIDT +++ +A+ C
Sbjct: 403 QWFIDTSKLQQQAMEC 418
Score = 166 bits (420), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
L+ G+Y+ + GP LEG + + +D V+ L++ ++ E+Y+HSYP DWRTKKPVIL
Sbjct: 339 TLVDETGRYTSETGPLLEGKRVHVDAEDTVISLLKDHIILQESYKHSYPIDWRTKKPVIL 398
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A +QWFIDT +++ +A+ C++ + PES ++++ Q+ +R YWCISRQRVWGVPIPVF
Sbjct: 399 RACKQWFIDTSKLQQQAMECMKDIKVYPESLRQNMDAQL-KRKYWCISRQRVWGVPIPVF 457
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSN 1271
Y DT +++N H LI +H D WW++ VE+LL ++ N
Sbjct: 458 YHRDTEEVLINREIFDHVRDLISKHSSDCWWNMSVEELLPQEILSRN 504
>gi|428216724|ref|YP_007101189.1| isoleucyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
gi|427988506|gb|AFY68761.1| Isoleucyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
Length = 960
Score = 415 bits (1066), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/632 (36%), Positives = 344/632 (54%), Gaps = 56/632 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG---------ATDLHALIWTTTPWSL 468
TALAE+ELEY H S+SIY+ + ++ L A L+A+IWTTTPW++
Sbjct: 202 TALAEAELEYPEGHTSRSIYVAFPVTEIGDKLKAALGKNLDAVPADRLYAMIWTTTPWTI 261
Query: 469 PANQFIAFNPALEYSVASVKGAN--------VIVAKCLVENLKWTFQTDIDVVCDFPGQY 520
P N ++ NP L+YS+ G + +VA LVE L + ++ + G+
Sbjct: 262 PGNLAVSANPRLKYSLVKATGLDDTDQGDRYYVVATELVEQLAKLLEQELTEIATMSGEA 321
Query: 521 LQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLIT 580
L+ HPI R +L V++ GTGLVH AP HG+DD+ + + +L+ +
Sbjct: 322 LEHTVCKHPIF--DRASPILLGEHVTAESGTGLVHTAPGHGRDDYNVGQKYGLGLLSPVN 379
Query: 581 NQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKA 638
+ G ++ +AG GL +L +G V+ + +L E YQH YPYDWRTKKP I++A
Sbjct: 380 DYGVFTEEAGQ-FAGLKVLKEGNQAVIDALSETGLLLKEEAYQHKYPYDWRTKKPTIVRA 438
Query: 639 SQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD 698
++QWF + + ALA + VN++P + + + +R WCISRQR WGVPIPVFYD
Sbjct: 439 TEQWFASVDGFRDAALAAIRSVNWIPAIGENRITSMVQERSDWCISRQRNWGVPIPVFYD 498
Query: 699 GDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFD 754
+T ++NE I H +I + G D WW LS +LL DV K D +D+WFD
Sbjct: 499 KETGEHLLNEETIAHVQEIIRQKGSDAWWELSEAELLPAKYQDVAHKYRKGTDTMDVWFD 558
Query: 755 SGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVD 809
SG SW+ V+K + PA +Y+EG DQ GWF SSLLTSVA+ + AP++ V HGF VD
Sbjct: 559 SGSSWAAVIKQREGLNYPADMYLEGSDQHRGWFQSSLLTSVAVNNHAPYKTVLTHGFTVD 618
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
EKG KMSKS+GN + + G L K+ PAYG DVLR W
Sbjct: 619 EKGRKMSKSLGNGVDPMVVVDGGNNL--------------------KQEPAYGADVLRLW 658
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVY 925
A+ VP GK IL+ D +KIR++ R+LL L++ + +I+ +D Y
Sbjct: 659 -ASSVDYSSDVPFGKTILSQIFDVSRKIRNTARFLLSNLYDFDPAKNAIAYDQLTELDKY 717
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
+L RL E + + +Q+ R +++ NF +LS FY + KDRLY + + R S
Sbjct: 718 LLHRLYEVGTEITKAFDSYQFFRFFQLMQNFCAVDLSNFYLDIAKDRLYISAADSPRRRS 777
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ +++++ +AP++ H AE+++ HLP
Sbjct: 778 CQTVMAIALNLIVKAIAPVLCHTAEDIWQHLP 809
Score = 316 bits (810), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 246/420 (58%), Gaps = 27/420 (6%)
Query: 14 ALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE 73
A N +FILHDGPPYANG H+GHA+NKILKDI R +L+G++V YV GWDCHGLPIE
Sbjct: 52 ANNPGEKFILHDGPPYANGNLHMGHALNKILKDIINRYQILRGRKVRYVLGWDCHGLPIE 111
Query: 74 LKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
LK + +S+ K L+ + +R KA+++AL+TI Q F+ WGV D++H Y+T EY
Sbjct: 112 LKVLQKLKSSERKELTAISLRHKARDYALQTIADQAEGFKRWGVWGDYDH-AYYTLKPEY 170
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + YIYR LKPVYWSPSS+TALAE+ELEY H S+SIY+ + ++
Sbjct: 171 EAAQINVFGQMVLKGYIYRGLKPVYWSPSSQTALAEAELEYPEGHTSRSIYVAFPVTEIG 230
Query: 190 AHLLEG---------ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------ 234
L A L+A+IWTTTPW++P N ++ NP L+YS+ G +
Sbjct: 231 DKLKAALGKNLDAVPADRLYAMIWTTTPWTIPGNLAVSANPRLKYSLVKATGLDDTDQGD 290
Query: 235 --VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
+VA LVE L + ++ + G+ L+ HPI R +L V++
Sbjct: 291 RYYVVATELVEQLAKLLEQELTEIATMSGEALEHTVCKHPIF--DRASPILLGEHVTAES 348
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH AP HG+DD+ + + +L+ + + G ++ +AG GL +L +G V+
Sbjct: 349 GTGLVHTAPGHGRDDYNVGQKYGLGLLSPVNDYGVFTEEAGQ-FAGLKVLKEGNQAVIDA 407
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
+ +L E YQH YPYDWRTKKP I++A++QWF + + AL N + +G
Sbjct: 408 LSETGLLLKEEAYQHKYPYDWRTKKPTIVRATEQWFASVDGFRDAALAAIRSVNWIPAIG 467
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ +AG GL +L EG V+ + +L E YQH YPYDWRTKKP
Sbjct: 375 LSPVNDYGVFTEEAGQ-FAGLKVLKEGNQAVIDALSETGLLLKEEAYQHKYPYDWRTKKP 433
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I++A++QWF + + ALA + VN++P + + + +R WCISRQR WGVPI
Sbjct: 434 TIVRATEQWFASVDGFRDAALAAIRSVNWIPAIGENRITSMVQERSDWCISRQRNWGVPI 493
Query: 1224 PVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD +T ++NE I H +I + G D WW L +LL
Sbjct: 494 PVFYDKETGEHLLNEETIAHVQEIIRQKGSDAWWELSEAELL 535
>gi|17228568|ref|NP_485116.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|81772618|sp|Q8YXY3.1|SYI_NOSS1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|17130419|dbj|BAB73030.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 960
Score = 414 bits (1065), Expect = e-112, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 345/637 (54%), Gaps = 51/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH----LLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY + L E DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFPVTSFAEAAKPLLGEYLPDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVK--GAN-------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDI 524
+A N L YS+ V GA +IVA LVE L T + V F G+ L+
Sbjct: 256 VAVNGDLNYSLVEVSRIGAETQSNFKYLIVAADLVERLAATISAQLTVKATFKGKELEHT 315
Query: 525 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
TY HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ L +P+L + + G
Sbjct: 316 TYRHPLFDRESPV-VVGGDYITTESGTGLVHTAPGHGQEDYVVGLRYGLPILAPVDDNGD 374
Query: 585 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ +AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I +A++QW
Sbjct: 375 FTQEAGQ-FAGLNVLGEGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIFRATEQW 433
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F E + EAL + V ++P + + +A+R WCISRQR WGVPIPVFYD +T
Sbjct: 434 FASVEGFRDEALKAIAAVKWIPAQGENRITPMVAERSDWCISRQRSWGVPIPVFYDEETG 493
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGIS 758
++NE I + +I E G D WW LSV +LL S N+ + + D +D+WFDSG S
Sbjct: 494 EPLLNEETINYVQAIIAEKGSDAWWELSVAELLPESYRNNGRSYRRGTDTMDVWFDSGSS 553
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V+K + PA +Y+EG DQ GWF SSLLTSV++ AP++ V HGFV+DE+G
Sbjct: 554 WASVVKQRPELRYPADMYLEGSDQHRGWFQSSLLTSVSVNGIAPYKTVLTHGFVLDEQGR 613
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS GNV+ I G K KK P YG DV+R W A+
Sbjct: 614 KMSKSEGNVVDPAIIINGGKD--------------------QKKEPPYGADVMRLW-ASS 652
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
V +G NI+ D KIR++ R+LLG L++ ++ +D YML R
Sbjct: 653 VDYTGDVRLGGNIIKQLNDVRGKIRNTARFLLGSLYDFDPEKNAVQFEEMPQLDKYMLHR 712
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E + + FQ+ R + + NF V +LS FY + KDRLY + + R S
Sbjct: 713 IREVFEEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYISAPDAFRRRSCQTV 772
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+H L R +AP++ H AE+++ +LP + S F
Sbjct: 773 IHIALENLARAIAPVLCHTAEDIWQYLPYKTPYKSVF 809
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/396 (45%), Positives = 244/396 (61%), Gaps = 22/396 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R LLQG++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNL 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ + L+PL +R+KAK FAL T++ Q+ F+ +GV DW+ N Y T EY Q+
Sbjct: 113 KSAERQNLTPLQLRQKAKEFALATVDNQRQNFKRYGVWGDWD-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH----L 192
F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY + L
Sbjct: 172 FGQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTSFAEAAKPLL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK--GAN-------VIVAKCLVE 243
E DL IWTTTPW++P N +A N L YS+ V GA +IVA LVE
Sbjct: 232 GEYLPDLGVAIWTTTPWTIPGNLAVAVNGDLNYSLVEVSRIGAETQSNFKYLIVAADLVE 291
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L T + V F G+ L+ TY HP+ + + ++ ++++ GTGLVH AP H
Sbjct: 292 RLAATISAQLTVKATFKGKELEHTTYRHPLFDRESPV-VVGGDYITTESGTGLVHTAPGH 350
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTE 361
GQ+D+++ L +P+L + + G ++ +AG GLN+LG+G V+ + +L E
Sbjct: 351 GQEDYVVGLRYGLPILAPVDDNGDFTQEAGQ-FAGLNVLGEGNQAVIDALTAAGSLLKEE 409
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 410 AYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 445
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 98/166 (59%), Gaps = 5/166 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LGEG V+ + +L E Y H YPYDWRTKKP I
Sbjct: 369 VDDNGDFTQEAGQ-FAGLNVLGEGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTIF 427
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P + + +A+R WCISRQR WGVPIPVF
Sbjct: 428 RATEQWFASVEGFRDEALKAIAAVKWIPAQGENRITPMVAERSDWCISRQRSWGVPIPVF 487
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNS 1270
YD +T ++NE I + +I E G D WW L V +LL S N+
Sbjct: 488 YDEETGEPLLNEETINYVQAIIAEKGSDAWWELSVAELLPESYRNN 533
>gi|156035535|ref|XP_001585879.1| hypothetical protein SS1G_12971 [Sclerotinia sclerotiorum 1980]
gi|154698376|gb|EDN98114.1| hypothetical protein SS1G_12971 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 952
Score = 414 bits (1065), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/617 (38%), Positives = 351/617 (56%), Gaps = 41/617 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE---GATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY +HIS S Y+K + +P + + + L ALIWTTTPW+LPAN+ I
Sbjct: 200 TALAEAELEYNNEHISTSAYIKFPITDIPGEVRDFVPNLSKLSALIWTTTPWTLPANRAI 259
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD--IDVV-CDFPGQYLQDITYIHPIN 531
AF+ L YS+ ++I+A + L+ + D I+VV D PG L+++TY + +
Sbjct: 260 AFHQDLTYSIVKCDDDHLIIASSRLSALQDSCFKDKVIEVVRQDIPGSVLRNLTYTNQLR 319
Query: 532 KEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS---- 586
+ D + L+ A FVSS GTGLVHCAP HG DD+ + I + + + G ++
Sbjct: 320 GQNSDDQPLIHADFVSSESGTGLVHCAPGHGMDDYEVCTRLGIEAIAPVDDLGCFTDAAL 379
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
PD L G ++L DG +VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 380 PDDPSALSGKSVLNDGNMEVLKILGDQVLFISKYKHKYPYDWRTKLPVIVRATEQWFADV 439
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVN 705
+K AL L +V F+P++ K+ L I R WCISRQR WGVPIP YD + T ++
Sbjct: 440 GDVKSVALERLNDVTFIPQTGKQRLESFIKSRSEWCISRQRAWGVPIPALYDENGTALLT 499
Query: 706 EANIKHFCTLIDEHGPDFWWS-LSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+ ++ H ++I+E G D WWS + + ++ + D +D+WFDSG SW+
Sbjct: 500 DTSVAHILSVIEERGIDAWWSDPENDPAWIPAGMSGTYRRGKDTMDVWFDSGTSWTQT-- 557
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVALKHT--APFRNVFLHGFVVDEKGAKMSKSVGNV 822
D+ A VY EG DQ GWF SSLLT A+ + APF+ + HGF +D+ G KMSKS+GN
Sbjct: 558 DQRADVYSEGTDQHRGWFQSSLLTHTAIADSSEAPFKTLITHGFTLDQSGKKMSKSIGNT 617
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA-SKDPTVP 881
I+ I G+ P K G +++QG +G D LR WVA+ +KD +
Sbjct: 618 IAPSQIMDGSLLPPVKMKKKGG-----NVSQG------FGADALRLWVASSDYTKD--IV 664
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLY 941
IG+ +L S + K R + + LLG +H S T +++ +D L +L + +++ Y
Sbjct: 665 IGQPVLASVNSALSKYRITFKMLLGSMH-ESARTSPVTK-LDKIALVQLRAVMSEVESAY 722
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
+++ RA + ++ +LSAFY KDRLYC G L IFH LL+ +
Sbjct: 723 NSYEFHRAVSAINRWIHTDLSAFYLEASKDRLYCGDGGG--------VLEEIFHGLLKML 774
Query: 1002 APIMPHLAEEVYSHLPS 1018
PI P L EEV++HLP+
Sbjct: 775 TPITPCLVEEVWNHLPA 791
Score = 353 bits (907), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 254/409 (62%), Gaps = 18/409 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ + K FILHDGPPYANG H+GHAVNK+LKDI R+ L QG RV +VPGW
Sbjct: 40 DLYKWQSHERSAKKPFILHDGPPYANGPLHVGHAVNKLLKDIICRTKLQQGHRVVWVPGW 99
Query: 66 DCHGLPIELKAITSK------DKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIE+KA+ + + +L + IR+ A+N A +T+ F WG++ADWE
Sbjct: 100 DCHGLPIEIKALEQQREKKDGEGILDAIGIRRAARNLASKTVKEHMKGFREWGIMADWE- 158
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+ T DK + QL F + K+ I+R KPVYWSPSSRTALAE+ELEY +H+S S
Sbjct: 159 KAWKTMDKTFETKQLAVFQEMVKKGLIFRRYKPVYWSPSSRTALAEAELEYNNEHISTSA 218
Query: 180 YLKIKLNQVPAHLLE---GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVI 236
Y+K + +P + + + L ALIWTTTPW+LPAN+ IAF+ L YS+ ++I
Sbjct: 219 YIKFPITDIPGEVRDFVPNLSKLSALIWTTTPWTLPANRAIAFHQDLTYSIVKCDDDHLI 278
Query: 237 VAKCLVESLKWTFQTD--IEVV-CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSK 292
+A + +L+ + D IEVV D PG L+++TY + + + D + L+ A FVSS
Sbjct: 279 IASSRLSALQDSCFKDKVIEVVRQDIPGSVLRNLTYTNQLRGQNSDDQPLIHADFVSSES 338
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS----PDAGPGLEGLNILGDGKDQ 348
GTGLVHCAP HG DD+ + I + + + G ++ PD L G ++L DG +
Sbjct: 339 GTGLVHCAPGHGMDDYEVCTRLGIEAIAPVDDLGCFTDAALPDDPSALSGKSVLNDGNME 398
Query: 349 VLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D +K AL
Sbjct: 399 VLKILGDQVLFISKYKHKYPYDWRTKLPVIVRATEQWFADVGDVKSVAL 447
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Query: 1117 PDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
PD L G ++L +G +VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 380 PDDPSALSGKSVLNDGNMEVLKILGDQVLFISKYKHKYPYDWRTKLPVIVRATEQWFADV 439
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVN 1235
+K AL L V F+P++ K+ L I R WCISRQR WGVPIP YD + T ++
Sbjct: 440 GDVKSVALERLNDVTFIPQTGKQRLESFIKSRSEWCISRQRAWGVPIPALYDENGTALLT 499
Query: 1236 EANIKHFCTLIDEHGPDFWWSLP 1258
+ ++ H ++I+E G D WWS P
Sbjct: 500 DTSVAHILSVIEERGIDAWWSDP 522
>gi|298493101|ref|YP_003723278.1| isoleucyl-tRNA synthetase ['Nostoc azollae' 0708]
gi|298235019|gb|ADI66155.1| isoleucyl-tRNA synthetase ['Nostoc azollae' 0708]
Length = 960
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/637 (37%), Positives = 345/637 (54%), Gaps = 51/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGAT-DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+S+SIY + +V L L+G DL +WTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHVSRSIYTAFPVTKVAEGLKSSLDGLLPDLGVAVWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN---------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDI 524
+A N ALEY+V V + +IVA LVE L ++ V FPG+ L+
Sbjct: 256 VAVNGALEYAVVEVSRTDTAMQRGFKYLIVAAELVERLVAILDAELTVKATFPGKDLEHT 315
Query: 525 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
TY HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+L + G
Sbjct: 316 TYRHPLFDRESQV-VVGGDYITTDSGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDGSGN 374
Query: 585 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
++ DAG GLN+L +G ++ + +L E Y H YPYDWRTKKP I +A++QW
Sbjct: 375 FTDDAGK-FSGLNVLSEGNQAIIDALTEVGSLLKEEAYPHKYPYDWRTKKPTIFRATEQW 433
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F + +AL + V ++P + + +A+R WCISRQR WGVPIPVFYD +T
Sbjct: 434 FASVAGFREDALKAISSVRWIPPQGENRITPMVAERSDWCISRQRTWGVPIPVFYDEETG 493
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGIS 758
++N I + ++ E G D WW LSVE+LL + ++ T + D +D+WFDSG S
Sbjct: 494 EALLNTETINYVQSIFAEKGSDAWWDLSVEELLPETYRHNGKTYRRGTDTMDVWFDSGSS 553
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
W+ V K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE+G
Sbjct: 554 WAAVAKQRPELGYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEQGR 613
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKSVGNV+ I G + PAYG DVLR WV++
Sbjct: 614 KMSKSVGNVVDPQVIINGGSN--------------------QNQQPAYGADVLRLWVSS- 652
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKR 929
V +G I+ D KIR++ R+LLG LH+ ++ +D YML R
Sbjct: 653 VDYSGDVRLGSKIIKQLADVRNKIRNTARFLLGSLHDFDPKQDGVAFDDLPDLDKYMLHR 712
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
+ E N + + FQ+ R + + NF V +LS FY + KDRLY + + R S
Sbjct: 713 IREVFNEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYISAADSFRRRSCQTV 772
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L L R +AP++ H AE+++ +P + S F
Sbjct: 773 LQIALENLARAIAPVLCHTAEDIWQFIPYKTPYKSVF 809
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/396 (44%), Positives = 245/396 (61%), Gaps = 22/396 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI R L +G ++ Y+PGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGQLHIGHALNKILKDIINRYQLFKGSKICYIPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++ + L+PL +R+KAK FAL+T++ Q+ F+ +GV DW+H Y T EY Q+
Sbjct: 113 KQAERQNLTPLQLRQKAKEFALKTVDEQRESFKRYGVWGDWDH-PYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL---L 193
F ++ + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SIY + +V L L
Sbjct: 172 FGEMFLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYTAFPVTKVAEGLKSSL 231
Query: 194 EGAT-DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---------VIVAKCLVE 243
+G DL +WTTTPW++P N +A N ALEY+V V + +IVA LVE
Sbjct: 232 DGLLPDLGVAVWTTTPWTIPGNLAVAVNGALEYAVVEVSRTDTAMQRGFKYLIVAAELVE 291
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L ++ V FPG+ L+ TY HP+ + + ++ ++++ GTGLVH AP H
Sbjct: 292 RLVAILDAELTVKATFPGKDLEHTTYRHPLFDRESQV-VVGGDYITTDSGTGLVHTAPGH 350
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTE 361
GQ+D+++ +P+L + G ++ DAG GLN+L +G ++ + +L E
Sbjct: 351 GQEDYIVGQRYGLPILAPVDGSGNFTDDAGK-FSGLNVLSEGNQAIIDALTEVGSLLKEE 409
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YPYDWRTKKP I +A++QWF + +AL
Sbjct: 410 AYPHKYPYDWRTKKPTIFRATEQWFASVAGFREDAL 445
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ DAG GLN+L EG ++ + +L E Y H YPYDWRTKKP I
Sbjct: 369 VDGSGNFTDDAGK-FSGLNVLSEGNQAIIDALTEVGSLLKEEAYPHKYPYDWRTKKPTIF 427
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + +AL + V ++P + + +A+R WCISRQR WGVPIPVF
Sbjct: 428 RATEQWFASVAGFREDALKAISSVRWIPPQGENRITPMVAERSDWCISRQRTWGVPIPVF 487
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD +T ++N I + ++ E G D WW L VE+LL
Sbjct: 488 YDEETGEALLNTETINYVQSIFAEKGSDAWWDLSVEELL 526
>gi|428771226|ref|YP_007163016.1| isoleucyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
gi|428685505|gb|AFZ54972.1| Isoleucyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
Length = 968
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/636 (37%), Positives = 350/636 (55%), Gaps = 50/636 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKI---KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H S+SIY KL + L E +L IWTTTPW++P N +
Sbjct: 196 TALAEAELEYPEGHTSRSIYASFTLTKLGEKAQSLAEFMPNLAVAIWTTTPWTIPGNLAV 255
Query: 475 AFNPALEYSVASV------KGANV---IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
A N L+Y+V + +G V IVAK LVE+L T ++ + G+ L+ T
Sbjct: 256 AVNGHLDYAVVEISPRLVGEGLGVRYLIVAKDLVESLSNTLDCELTIKTVIKGEELELST 315
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
Y HP+ + + ++ ++++ GTGLVH AP HG +D++ +P+L+ + ++G +
Sbjct: 316 YKHPLFDRESPV-VIGGDYITTESGTGLVHTAPGHGLEDYMTGQKYHLPILSPVDDKGNF 374
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
+ +AG +GLN+L D ++ + + +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 375 TEEAGE-FQGLNVLKDANQAIIDALTAKGSLLKEEAYAHKYPYDWRTKKPTIFRATEQWF 433
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
+ + AL ++EV ++P + + +A R WCISRQR WG+PIPVFYD +T
Sbjct: 434 ASVDGFRDLALKAIKEVKWIPSQGENRITPMVADRSDWCISRQRSWGLPIPVFYDEETNE 493
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISW 759
++NE I H +I E G D WW LSV++LL S N+ T K D +D+WFDSG SW
Sbjct: 494 PLLNEETINHVRDIIREKGSDAWWELSVDELLPESYRNNGKTYRKGMDTMDVWFDSGSSW 553
Query: 760 SHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+ V + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG K
Sbjct: 554 AAVANQREELKYPVDLYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGMK 613
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS+GNV+ + I G K K+ P YG DVLR WV++
Sbjct: 614 MSKSLGNVVDPNLIINGGK--------------------NQKQQPPYGADVLRLWVSS-T 652
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRL 930
V IG NI+ D +KIR++ R+L+G LH+ ++S +D Y+L
Sbjct: 653 DYSGDVRIGDNIIKQLADVYRKIRNTARFLIGNLHDFDPQKDAVSYEDLPELDKYILHET 712
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
+ + + +Q+ + + + NF V +LS FY + KDRLY N R S +
Sbjct: 713 YLVFSEITEAFESYQFFKFFQKVQNFCVVDLSNFYLDIAKDRLYISDPNSPRRRSCQTVM 772
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
I L R +AP++ H+AE+++ +LP + S F
Sbjct: 773 AIILENLARAIAPVLCHMAEDIWQNLPYEKPFNSVF 808
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/400 (43%), Positives = 243/400 (60%), Gaps = 21/400 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N K FILHDGPPYANG+ H+GHA+NK+LKDI + LLQG +V YVPGWDCHGLPIELK
Sbjct: 48 NPKDLFILHDGPPYANGSLHMGHALNKVLKDIINKYKLLQGHKVRYVPGWDCHGLPIELK 107
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + + L+P+ +R KA++FAL+ Q F+ +GV DWE N Y T EY
Sbjct: 108 VLQSLKQKEREALTPITLRHKARDFALKAQQEQAEGFKRYGVWGDWE-NPYLTLLPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI---KLNQV 188
Q+ F + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY KL +
Sbjct: 167 AQIEVFGKMALNGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIYASFTLTKLGEK 226
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV------KGANV---IVAK 239
L E +L IWTTTPW++P N +A N L+Y+V + +G V IVAK
Sbjct: 227 AQSLAEFMPNLAVAIWTTTPWTIPGNLAVAVNGHLDYAVVEISPRLVGEGLGVRYLIVAK 286
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
LVESL T ++ + G+ L+ TY HP+ + + ++ ++++ GTGLVH
Sbjct: 287 DLVESLSNTLDCELTIKTVIKGEELELSTYKHPLFDRESPV-VIGGDYITTESGTGLVHT 345
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV--EPDV 357
AP HG +D++ +P+L+ + ++G ++ +AG +GLN+L D ++ + + +
Sbjct: 346 APGHGLEDYMTGQKYHLPILSPVDDKGNFTEEAGE-FQGLNVLKDANQAIIDALTAKGSL 404
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E Y H YPYDWRTKKP I +A++QWF + + AL
Sbjct: 405 LKEEAYAHKYPYDWRTKKPTIFRATEQWFASVDGFRDLAL 444
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 5/172 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKP 1163
L+ + ++G ++ +AG +GLN+L + ++ + + +L E Y H YPYDWRTKKP
Sbjct: 365 LSPVDDKGNFTEEAGE-FQGLNVLKDANQAIIDALTAKGSLLKEEAYAHKYPYDWRTKKP 423
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF + + AL ++ V ++P + + +A R WCISRQR WG+PI
Sbjct: 424 TIFRATEQWFASVDGFRDLALKAIKEVKWIPSQGENRITPMVADRSDWCISRQRSWGLPI 483
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
PVFYD +T ++NE I H +I E G D WW L V++LL S N+ T
Sbjct: 484 PVFYDEETNEPLLNEETINHVRDIIREKGSDAWWELSVDELLPESYRNNGKT 535
>gi|116075644|ref|ZP_01472903.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
gi|116066959|gb|EAU72714.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
Length = 978
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/632 (37%), Positives = 346/632 (54%), Gaps = 56/632 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--------LEGATDLHAL-------IWT 462
TALAE+ELEY H S S+Y+ +P L LE D AL IWT
Sbjct: 214 TALAEAELEYPDGHTSPSVYVAFPAVALPDALRQSLGQQGLELPADGDALGDVLQVSIWT 273
Query: 463 TTPWSLPANQFIAFNPALEYSV-ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y++ A +G +IVA L + L F+T ++ G L
Sbjct: 274 TTPWTLPANLAVSVNDRLDYALCADNRGRLLIVANDLRDALAAKFETTLETKAVVKGADL 333
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y HP+ E+ ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 334 AGLRYRHPL-LERESPVVVGGEYITTESGTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDE 392
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AGP GLN+L D ++ +E +L E+Y H YPYDWRTKKP I +A+
Sbjct: 393 AGTLTDEAGP-FVGLNVLKDANPTIVEALEQSGALLKHESYGHRYPYDWRTKKPTIFRAT 451
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF E + EAL +++VN++P S + + +++R WCISRQR WGVPIPVFY
Sbjct: 452 EQWFASVEGFRSEALEAIDQVNWLPASGRNRIESMVSERGDWCISRQRTWGVPIPVFYHR 511
Query: 698 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFD 754
GD +++N +I H LI +HG D WW +LL S K D +D+WFD
Sbjct: 512 SSGD-VLLNADSIAHIQALIAQHGADVWWEKDESELLPPSHQAEADQWRKGTDTMDVWFD 570
Query: 755 SGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVD 809
SG SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP+R V HGF +D
Sbjct: 571 SGSSWAGVASKRDGLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYRTVLTHGFALD 630
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
EKG KMSKS+GNV+ I +G K K+ P YG DVLR W
Sbjct: 631 EKGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPPYGADVLRLW 670
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVY 925
V++ VPIG IL+ D +K+R++ RYLLG LH+ + +++ +D +
Sbjct: 671 VSS-VDYSADVPIGAGILSQLADVYRKVRNTARYLLGNLHDFDPARDAVAIEDLPLLDRW 729
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
ML+R +++ + +++ R ++L N+ V++LS FY + KDRLY + N R S
Sbjct: 730 MLQRTAVVLDSISEAFDNYEFFRFFQLLQNYCVSDLSNFYLDIAKDRLYVSAPNDRRRRS 789
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ +LP
Sbjct: 790 CQTVMALIIERLAGAIAPVLCHMAEDIWQNLP 821
Score = 322 bits (825), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/407 (43%), Positives = 243/407 (59%), Gaps = 26/407 (6%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G+P F LHDGPPYANG H+GHA+NK+LKDI + ++QG++V YVPGWDCHGLPI
Sbjct: 64 EENTGEP-FTLHDGPPYANGALHMGHALNKVLKDIINKHRVMQGRKVRYVPGWDCHGLPI 122
Query: 73 ELKAITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
ELK + D K L+P+ +RKKA +A + ++ Q A F+ WG+ ADWE N Y T K+
Sbjct: 123 ELKVLQGMDQEQRKALTPVKLRKKAAAYARKQVDGQMAGFKRWGIWADWE-NPYLTLQKD 181
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
Y Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y+ +
Sbjct: 182 YEAAQIEVFGAMALKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAVAL 241
Query: 189 PAHL--------LEGATDLHAL-------IWTTTPWSLPANQFIAFNPALEYSV-ASVKG 232
P L LE D AL IWTTTPW+LPAN ++ N L+Y++ A +G
Sbjct: 242 PDALRQSLGQQGLELPADGDALGDVLQVSIWTTTPWTLPANLAVSVNDRLDYALCADNRG 301
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
+IVA L ++L F+T +E G L + Y HP+ E+ ++ ++++
Sbjct: 302 RLLIVANDLRDALAAKFETTLETKAVVKGADLAGLRYRHPL-LERESPVVVGGEYITTES 360
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH AP HG DDF +PVL + G + +AGP GLN+L D ++
Sbjct: 361 GTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTDEAGP-FVGLNVLKDANPTIVEA 419
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+E +L E+Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 420 LEQSGALLKHESYGHRYPYDWRTKKPTIFRATEQWFASVEGFRSEAL 466
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 97/163 (59%), Gaps = 7/163 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ +E +L E+Y H YPYDWRTKKP I
Sbjct: 390 VDEAGTLTDEAGP-FVGLNVLKDANPTIVEALEQSGALLKHESYGHRYPYDWRTKKPTIF 448
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL ++ VN++P S + + +++R WCISRQR WGVPIPVF
Sbjct: 449 RATEQWFASVEGFRSEALEAIDQVNWLPASGRNRIESMVSERGDWCISRQRTWGVPIPVF 508
Query: 1227 Y---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
Y GD +++N +I H LI +HG D WW +LL S
Sbjct: 509 YHRSSGD-VLLNADSIAHIQALIAQHGADVWWEKDESELLPPS 550
>gi|357137856|ref|XP_003570515.1| PREDICTED: isoleucyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 1061
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/641 (37%), Positives = 346/641 (53%), Gaps = 64/641 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL--EGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY +H+SKSIY K+ L E ++ IWTTTPW++PAN +A
Sbjct: 260 TALAEAELEYSENHVSKSIYAAFKITSPSKSGLLDEFLPNVCLAIWTTTPWTIPANAAVA 319
Query: 476 FNPALEYSVA---------SVKGAN----------------VIVAKCLVENLKWTFQTDI 510
NP L Y+V S G VIVA LV L+ + +
Sbjct: 320 VNPELTYAVVELQSVLESESTSGGKQRKLGSILSSGNEKPFVIVASDLVSVLESKWGMKL 379
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 570
+ FPG L+ YIHP+N ++ + ++ ++++ GTGLVH AP HGQ+D++ L
Sbjct: 380 VIRKSFPGSVLEHCRYIHPVNGDECSV-VIGGDYITTESGTGLVHTAPGHGQEDYITGLK 438
Query: 571 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV--LWTENYQHSYPYDW 628
+P+++ + ++G ++ +AG GL++LG G V+ ++ V + E Y+H YPYDW
Sbjct: 439 YGLPIVSPVDDEGNFTAEAGQ-FNGLSVLGAGNAAVVKYLDEHVSLILEEPYKHKYPYDW 497
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
R+K+P I +A++QWF + + AL ++ V +VP +K + I+ R WCISRQR
Sbjct: 498 RSKEPTIFRATEQWFASVDGFRDAALDAIKRVTWVPSQGEKRIVAMISGRSDWCISRQRT 557
Query: 689 WGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTK 744
WGVPIPVFY DT ++ E I+H ++ + G D WW ++ E+LL D S K
Sbjct: 558 WGVPIPVFYHVDTQEPLITEETIEHIKAIVSKKGSDAWWYMTTEELLPDKYRDKASEYRK 617
Query: 745 SNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFR 799
D +D+WFDSG SW+ V + PA VY+EG DQ GWF SSLLTS+A AP+
Sbjct: 618 GTDTMDVWFDSGSSWAAVSAKRDGLNFPADVYLEGSDQHRGWFQSSLLTSIATTGKAPYS 677
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+V HGFV+DEKG KMSKS+GNV+ + G K +K+ P
Sbjct: 678 SVITHGFVLDEKGLKMSKSIGNVVDPERVIVGGKN--------------------SKEEP 717
Query: 860 AYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN-HSESTGSI 918
YG DVLR WV++ V IG IL D +K+R ++R+LL LH+ E++
Sbjct: 718 GYGADVLRLWVSS-VDYTGDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENSVPY 776
Query: 919 SRY--VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
S +D Y L +L +M Y +Q+ + + L F + LS FYF + KDRLY
Sbjct: 777 SDLPKIDQYALFQLENVVASMKDSYDNYQFYKIYQTLQRFAIVGLSNFYFDVAKDRLYVG 836
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
R S L L+R +APIMPHLAE+V+ +LP
Sbjct: 837 GRVSYTRKSCQTVLAAHLLYLVRAIAPIMPHLAEDVWQNLP 877
Score = 323 bits (828), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 175/415 (42%), Positives = 243/415 (58%), Gaps = 36/415 (8%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANG H+GHA+NK+LKDI R LLQ +V +VPGWDCHGLPIELK
Sbjct: 112 NTGAAFSLHDGPPYANGDLHMGHALNKVLKDIINRYKLLQNHKVSFVPGWDCHGLPIELK 171
Query: 76 AITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S DK L+P+ +R+KA FA T+N Q F+ G+ ADW+ N Y T EY
Sbjct: 172 VLKSMDKETLNALTPIKLRQKAAKFAKATVNAQMNSFKRIGIWADWD-NPYLTLSPEYEA 230
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
QL F + + YIYR KPV+WSPSSRTALAE+ELEY +HVSKSIY K+
Sbjct: 231 AQLEVFGQMVMRGYIYRGRKPVHWSPSSRTALAEAELEYSENHVSKSIYAAFKITSPSKS 290
Query: 192 LL--EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA---------SVKGAN------ 234
L E ++ IWTTTPW++PAN +A NP L Y+V S G
Sbjct: 291 GLLDEFLPNVCLAIWTTTPWTIPANAAVAVNPELTYAVVELQSVLESESTSGGKQRKLGS 350
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
VIVA LV L+ + + + FPG L+ YIHP+N ++ + ++
Sbjct: 351 ILSSGNEKPFVIVASDLVSVLESKWGMKLVIRKSFPGSVLEHCRYIHPVNGDECSV-VIG 409
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGD 344
++++ GTGLVH AP HGQ+D++ L +P+++ + ++G ++ +AG GL++LG
Sbjct: 410 GDYITTESGTGLVHTAPGHGQEDYITGLKYGLPIVSPVDDEGNFTAEAGQ-FNGLSVLGA 468
Query: 345 GKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
G V+ ++ V + E Y+H YPYDWR+K+P I +A++QWF + + AL
Sbjct: 469 GNAAVVKYLDEHVSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRDAAL 523
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +AG GL++LG G V+ ++ V + E Y+H YPYDWR+K+P I
Sbjct: 447 VDDEGNFTAEAGQ-FNGLSVLGAGNAAVVKYLDEHVSLILEEPYKHKYPYDWRSKEPTIF 505
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + AL ++ V +VP +K + I+ R WCISRQR WGVPIPVF
Sbjct: 506 RATEQWFASVDGFRDAALDAIKRVTWVPSQGEKRIVAMISGRSDWCISRQRTWGVPIPVF 565
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y DT ++ E I+H ++ + G D WW + E+LL
Sbjct: 566 YHVDTQEPLITEETIEHIKAIVSKKGSDAWWYMTTEELL 604
>gi|434403042|ref|YP_007145927.1| Isoleucyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
gi|428257297|gb|AFZ23247.1| Isoleucyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
Length = 996
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 249/673 (36%), Positives = 347/673 (51%), Gaps = 87/673 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+S+SIY + V L DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHVSRSIYAAFPVTGVSEALKSSLAAYLPDLAVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASV------------KGAN------------------------------ 491
+A N L YSV V +G+
Sbjct: 256 VAVNADLHYSVVEVEPHPPTPSPQARRGSEEEVVSSTPQAGSEEFTSPSLLAERGTEGVR 315
Query: 492 ---VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSS 548
+IVA LVE L ++ V F G+ L+ TY HP+ + + ++ ++++
Sbjct: 316 FRYLIVAAELVERLAAFLDVELTVRATFSGKDLEGTTYRHPLFDRESPV-VVGGDYITTD 374
Query: 549 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH 608
GTGLVH AP HGQ+D+++ +P+L + + G ++ +AG + GLN+LGDG V+
Sbjct: 375 SGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGNFTAEAGKFV-GLNVLGDGNQAVID 433
Query: 609 LVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPES 666
+ +L E YQH YPYDWRTKKP I +A++QWF E + AL + V ++P
Sbjct: 434 ALTEAGSLLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFREAALNAIASVRWIPAQ 493
Query: 667 AKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFW 724
+ + IA+R WCISRQR WGVPIPVFYD T +++N I H +I E G D W
Sbjct: 494 GENRITPMIAERSDWCISRQRSWGVPIPVFYDEATGEVLLNAETINHVQAIIAEKGSDAW 553
Query: 725 WSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQ 777
W LSVE+LL N T + D +D+WFDSG SW+ V K + P +Y+EG DQ
Sbjct: 554 WELSVEELLPEQYRNDGKTYRRGTDTMDVWFDSGSSWAAVAKQRPELRYPVDMYLEGSDQ 613
Query: 778 INGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPA 837
GWF SSLLTSVA+ AP++ V HGFV+DE G KMSKSVGNV+ I QG K
Sbjct: 614 HRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDENGRKMSKSVGNVVDPQLILQGGKD--- 670
Query: 838 YEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKI 897
K+ PAYG DVLR WV++ V +G NI+ D KI
Sbjct: 671 -----------------QKQQPAYGADVLRLWVSS-VDYSSDVRLGSNIIKQLADVRNKI 712
Query: 898 RSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVL 953
R++ R+LLG L + + T ++ +D YML R+ E N + + FQ+ R + +
Sbjct: 713 RNTARFLLGSLDDFNPETDAVPFEKLPELDKYMLHRIREVFNEVTEAFDSFQFFRFFQTV 772
Query: 954 LNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
NF V +LS FY + KDRLY S + R S L L++ +AP++ H AE+++
Sbjct: 773 QNFCVVDLSNFYLDVAKDRLYISSTDAFRRRSCQTVLQIALENLVKAIAPVLCHTAEDIW 832
Query: 1014 SHLPSRQGTFSSF 1026
+P + S F
Sbjct: 833 QFIPYKTPYKSVF 845
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/432 (41%), Positives = 247/432 (57%), Gaps = 58/432 (13%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R LL+G++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLKGRKVRYVPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ + L+ L +R+KA+ FAL+T++ Q+ F+ +GV DW +N Y T EY Q+
Sbjct: 113 KSAERQNLTTLQLRQKAQEFALKTVDDQRESFKQYGVWGDW-NNPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F ++ + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SIY + V L
Sbjct: 172 FGEMFLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVTGVSEALKSSL 231
Query: 197 T----DLHALIWTTTPWSLPANQFIAFNPALEYSVASV------------KGAN------ 234
DL IWTTTPW++P N +A N L YSV V +G+
Sbjct: 232 AAYLPDLAVAIWTTTPWTIPGNLAVAVNADLHYSVVEVEPHPPTPSPQARRGSEEEVVSS 291
Query: 235 ---------------------------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDI 267
+IVA LVE L ++ V F G+ L+
Sbjct: 292 TPQAGSEEFTSPSLLAERGTEGVRFRYLIVAAELVERLAAFLDVELTVRATFSGKDLEGT 351
Query: 268 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 327
TY HP+ + + ++ ++++ GTGLVH AP HGQ+D+++ +P+L + + G
Sbjct: 352 TYRHPLFDRESPV-VVGGDYITTDSGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGN 410
Query: 328 YSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 385
++ +AG + GLN+LGDG V+ + +L E YQH YPYDWRTKKP I +A++QW
Sbjct: 411 FTAEAGKFV-GLNVLGDGNQAVIDALTEAGSLLKEEAYQHKYPYDWRTKKPTIFRATEQW 469
Query: 386 FIDTERIKPEAL 397
F E + AL
Sbjct: 470 FASVEGFREAAL 481
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG + GLN+LG+G V+ + +L E YQH YPYDWRTKKP I
Sbjct: 405 VDDNGNFTAEAGKFV-GLNVLGDGNQAVIDALTEAGSLLKEEAYQHKYPYDWRTKKPTIF 463
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + AL + V ++P + + IA+R WCISRQR WGVPIPVF
Sbjct: 464 RATEQWFASVEGFREAALNAIASVRWIPAQGENRITPMIAERSDWCISRQRSWGVPIPVF 523
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD T +++N I H +I E G D WW L VE+LL
Sbjct: 524 YDEATGEVLLNAETINHVQAIIAEKGSDAWWELSVEELL 562
>gi|326505354|dbj|BAK03064.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1064
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/641 (37%), Positives = 346/641 (53%), Gaps = 64/641 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-NQVPAHLL-EGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY +H+SKSIY K+ N + LL E ++ IWTTTPW++PAN +A
Sbjct: 261 TALAEAELEYSENHVSKSIYAAFKITNPSNSGLLDEFLPNVCLAIWTTTPWTIPANAAVA 320
Query: 476 FNPALEYSVA---------SVKGAN----------------VIVAKCLVENLKWTFQTDI 510
NP L Y+V S G +IVA LV L+ + +
Sbjct: 321 VNPELSYAVVELQPVLESESTSGGKQRKLGSIFSSGNEKPFIIVASDLVSVLESKWGVKL 380
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 570
+ FPG L+ Y+HP+N + + ++ ++++ GTGLVH AP HGQ+D+L L
Sbjct: 381 VIRKSFPGSVLEHCRYLHPVNGNECSV-VIGGDYITTESGTGLVHTAPGHGQEDYLTGLK 439
Query: 571 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV--LWTENYQHSYPYDW 628
+P+++ + ++G ++ +AG GL++LG G V+ ++ V + E Y+H YPYDW
Sbjct: 440 YGLPIVSPVDDEGNFTAEAGQ-FSGLSVLGAGNAAVVKYLDEHVSLILEEPYKHKYPYDW 498
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
R+K+P I +A++QWF + + AL ++ V +VP + + + I+ R WCISRQR
Sbjct: 499 RSKEPTIFRATEQWFASVDGFRDAALDAIKRVTWVPSQGENRIVNMISGRSDWCISRQRT 558
Query: 689 WGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTK 744
WGVPIPVFY DT ++ E I+H ++ E G D WW + EQLL D S K
Sbjct: 559 WGVPIPVFYHVDTQEPLITEETIEHIKAIVSEKGSDAWWYMPTEQLLPEKYRDKASEYRK 618
Query: 745 SNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFR 799
D +D+WFDSG SW+ V + PA VY+EG DQ GWF SSLLTS+A AP+
Sbjct: 619 GTDTMDVWFDSGSSWAAVSAKRDGLNFPADVYLEGSDQHRGWFQSSLLTSIATTGKAPYS 678
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+V HGFV+DE G KMSKSVGNV+ + G K +K+ P
Sbjct: 679 SVITHGFVLDEDGFKMSKSVGNVVDPEKVIVGGKN--------------------SKEEP 718
Query: 860 AYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN-HSESTGSI 918
YG DVLR WV++ V IG IL D +K+R ++R+LL LH+ E++
Sbjct: 719 PYGADVLRLWVSS-VDYTGDVLIGSQILRQMSDMYRKLRGTMRFLLANLHDWKPENSVPY 777
Query: 919 SRY--VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
S +D Y L +L +M Y +Q+ + + L F + LS FYF + KDRLY
Sbjct: 778 SDLPKIDQYALFQLENVVASMKDSYDHYQFYKIYQTLQRFAIVGLSNFYFDVAKDRLYVG 837
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
R S L L+R +APIMPHLAE+++ +LP
Sbjct: 838 GRVSYTRKSCQTVLAAHLLYLVRAIAPIMPHLAEDIWQNLP 878
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 245/415 (59%), Gaps = 36/415 (8%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANG H+GHA+NK+LKDI R LLQ +V ++PGWDCHGLPIELK
Sbjct: 113 NTGATFTLHDGPPYANGDLHMGHALNKVLKDIINRYKLLQNHKVSFIPGWDCHGLPIELK 172
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S DK L+P+ +R+KA FA T+N Q FE G+ ADW+ N Y T EY
Sbjct: 173 VLKSMDKATLDALTPIKLRQKAAKFAKATVNAQMNSFERIGIWADWD-NPYLTLSPEYEA 231
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL-NQVPA 190
QL F + + YIYR KPV+WSPSSRTALAE+ELEY +HVSKSIY K+ N +
Sbjct: 232 AQLEVFGQMVMRGYIYRGRKPVHWSPSSRTALAEAELEYSENHVSKSIYAAFKITNPSNS 291
Query: 191 HLL-EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA---------SVKGAN------ 234
LL E ++ IWTTTPW++PAN +A NP L Y+V S G
Sbjct: 292 GLLDEFLPNVCLAIWTTTPWTIPANAAVAVNPELSYAVVELQPVLESESTSGGKQRKLGS 351
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
+IVA LV L+ + + + FPG L+ Y+HP+N + + ++
Sbjct: 352 IFSSGNEKPFIIVASDLVSVLESKWGVKLVIRKSFPGSVLEHCRYLHPVNGNECSV-VIG 410
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGD 344
++++ GTGLVH AP HGQ+D+L L +P+++ + ++G ++ +AG GL++LG
Sbjct: 411 GDYITTESGTGLVHTAPGHGQEDYLTGLKYGLPIVSPVDDEGNFTAEAGQ-FSGLSVLGA 469
Query: 345 GKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
G V+ ++ V + E Y+H YPYDWR+K+P I +A++QWF + + AL
Sbjct: 470 GNAAVVKYLDEHVSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRDAAL 524
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +AG GL++LG G V+ ++ V + E Y+H YPYDWR+K+P I
Sbjct: 448 VDDEGNFTAEAGQ-FSGLSVLGAGNAAVVKYLDEHVSLILEEPYKHKYPYDWRSKEPTIF 506
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + AL ++ V +VP + + + I+ R WCISRQR WGVPIPVF
Sbjct: 507 RATEQWFASVDGFRDAALDAIKRVTWVPSQGENRIVNMISGRSDWCISRQRTWGVPIPVF 566
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y DT ++ E I+H ++ E G D WW +P EQLL
Sbjct: 567 YHVDTQEPLITEETIEHIKAIVSEKGSDAWWYMPTEQLL 605
>gi|33239720|ref|NP_874662.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|81665019|sp|Q7VDV0.1|SYI_PROMA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|33237245|gb|AAP99314.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 969
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/644 (36%), Positives = 350/644 (54%), Gaps = 56/644 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG---------------ATDLHALIWT 462
TALAE+ELEY H S SIY+ + ++P L E + L IWT
Sbjct: 204 TALAEAELEYPEGHTSPSIYVAFSVVKLPNLLQESLSKQGLALPVHEDGLSNKLKVAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN +A N ++Y +A + I+A L E + + ++ V G+ L
Sbjct: 264 TTPWTLPANMAVAVNENIDYIIAKDNSEKLLIIASDLREIVSEEIGSPLEKVAIVKGKML 323
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y HP+ +L ++++ GTG+VH AP HG DDF + K+P++ +
Sbjct: 324 DGVLYKHPLFDSLNPF-VLGGNYITTESGTGIVHTAPGHGVDDFNTGMKYKLPIICPVDE 382
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWTEN-YQHSYPYDWRTKKPVILKAS 639
+G ++ +AG EGLN+L D ++++ L E L E Y H YPYDWRTKKP I +A+
Sbjct: 383 KGFFTSEAG-DFEGLNVLKDANTKIINALKESGCLLKEKPYIHKYPYDWRTKKPTIFRAT 441
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF E + +AL +E+V ++P+S KK ++ + R WCISRQR WGVPIPVFY
Sbjct: 442 EQWFASVEGFRNDALNSIEKVEWLPQSGKKRIKSMVEDRGDWCISRQRNWGVPIPVFYSK 501
Query: 698 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDS 755
+G +++NEA IKH L ++G D WW L + +LL N S K D +D+WFDS
Sbjct: 502 EGSKVLLNEATIKHIYNLFVKYGADAWWELPISELLPSNYSSEAHKWEKGKDTMDVWFDS 561
Query: 756 GISWSHVLK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V+ + PA +Y+EG DQ GWF SSLLTSVA+ AP+ V HGF +DE
Sbjct: 562 GSSWTSVISKSDELNYPADLYLEGSDQHRGWFQSSLLTSVAVNSHAPYLKVLTHGFALDE 621
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL-PAYGVDVLRWW 869
G KMSKS+GN+I I G KKL PAYG DVLR W
Sbjct: 622 NGRKMSKSLGNIIDPWKIINGGNN---------------------KKLEPAYGADVLRLW 660
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVY 925
V++ VPIG NIL+ D +K+R++ RYLLG LH+ + + +D +
Sbjct: 661 VSS-VDYSVDVPIGNNILSQLSDVYRKVRNTARYLLGNLHDFDPAKDGLDIGDLPILDRW 719
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
ML R + + + + +++++ ++L +F V +LS FY + KDRLY + N R S
Sbjct: 720 MLNRTADVVDEISIAFERYEFSKFFQLLQSFCVVDLSNFYLDIAKDRLYVSAPNDFRRRS 779
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
+ L I L ++P++ H AE+++ ++P + S F +
Sbjct: 780 CQYVLSLIVERLAGVISPVLSHTAEDIWQNIPYKLNEESVFQRY 823
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/404 (42%), Positives = 236/404 (58%), Gaps = 25/404 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANG H+GHA+NKILKDI + +L+G +V +VPGWDCHGLPIEL+
Sbjct: 56 NKGSTFTLHDGPPYANGNLHMGHALNKILKDIINKYQILKGSKVRFVPGWDCHGLPIELQ 115
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + D+ L+P+ +RKKA +A + I QK F WG+ ADW+ N Y T KEY
Sbjct: 116 VLKTLDRKEREDLTPIKLRKKAAAYAHKQIALQKDGFRRWGIWADWD-NPYLTLQKEYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSSRTALAE+ELEY H S SIY+ + ++P
Sbjct: 175 AQIKLFGEMAFKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSPSIYVAFSVVKLPNL 234
Query: 192 LLEG---------------ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-V 235
L E + L IWTTTPW+LPAN +A N ++Y +A +
Sbjct: 235 LQESLSKQGLALPVHEDGLSNKLKVAIWTTTPWTLPANMAVAVNENIDYIIAKDNSEKLL 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
I+A L E + + +E V G+ L + Y HP+ +L ++++ GTG
Sbjct: 295 IIASDLREIVSEEIGSPLEKVAIVKGKMLDGVLYKHPLFDSLNPF-VLGGNYITTESGTG 353
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVE 354
+VH AP HG DDF + K+P++ + +G ++ +AG EGLN+L D ++++ L E
Sbjct: 354 IVHTAPGHGVDDFNTGMKYKLPIICPVDEKGFFTSEAG-DFEGLNVLKDANTKIINALKE 412
Query: 355 PDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E Y H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 413 SGCLLKEKPYIHKYPYDWRTKKPTIFRATEQWFASVEGFRNDAL 456
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 109/174 (62%), Gaps = 6/174 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTEN-YQHSYPYDWRTKKPVIL 1166
+ +G ++ +AG EGLN+L + ++++ L E L E Y H YPYDWRTKKP I
Sbjct: 380 VDEKGFFTSEAG-DFEGLNVLKDANTKIINALKESGCLLKEKPYIHKYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL +E V ++P+S KK ++ + R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASVEGFRNDALNSIEKVEWLPQSGKKRIKSMVEDRGDWCISRQRNWGVPIPVF 498
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSNQG 1278
Y +G +++NEA IKH L ++G D WW LP+ +LL S+ +S K +G
Sbjct: 499 YSKEGSKVLLNEATIKHIYNLFVKYGADAWWELPISELL-PSNYSSEAHKWEKG 551
>gi|300868292|ref|ZP_07112921.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
6506]
gi|300333727|emb|CBN58105.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
6506]
Length = 1183
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/654 (37%), Positives = 349/654 (53%), Gaps = 86/654 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKI---KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H S+SIY+ + KL + L +LH +WTTTPW++PAN +
Sbjct: 196 TALAEAELEYPEGHTSRSIYVALAIAKLAKSAKALTPYLPNLHLAVWTTTPWTIPANLAV 255
Query: 475 AFNPALEYSVASVKG------------------------------------ANVIVAKCL 498
A NP L Y+V G +IVA L
Sbjct: 256 AVNPDLTYAVVKFSGEGLSTNGAQNSPESEELSAIELKKTPENKELSTKVEKTLIVAADL 315
Query: 499 VENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 558
VE L T T ++V+ G+ L+ TY HP+ + ++ ++++ GTGLVH AP
Sbjct: 316 VEKLSATLNTKLEVLATIQGKDLEKSTYKHPLFDRISPV-VIGGDYITADSGTGLVHTAP 374
Query: 559 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 616
HGQ+D+ + +P+L+ + + G ++ +AG EGLN+LGDG V+ + ++
Sbjct: 375 GHGQEDYQVGQRYGLPLLSPVDDNGNFTAEAGQ-FEGLNVLGDGNGAVIDALAGAGALIK 433
Query: 617 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIA 676
E Y HSYPYDWRTKKP I +A++QWF E + AL + +V ++P + + ++
Sbjct: 434 EEVYAHSYPYDWRTKKPTIFRATEQWFASVEGFREAALKAIADVKWIPAQGENRITAMVS 493
Query: 677 QRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLN 734
R WCISRQR WGVPIP FYD +T ++NE I H + + G D WW L +E+LL
Sbjct: 494 DRSDWCISRQRSWGVPIPAFYDEETGEPLLNEETIAHVQAIFAQKGSDAWWELPIEELLP 553
Query: 735 TSDVNSNVT--KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLL 787
S N+ T K D +D+WFDSG SW+ V K + PA +Y+EG DQ GWF SSLL
Sbjct: 554 ESYRNNGKTYRKGTDTMDVWFDSGSSWAAVAKGREELHYPAEMYLEGSDQHRGWFQSSLL 613
Query: 788 TSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVIS 847
TSVA AP++ V HGFV+DE+G KMSKS+GNV+ PA VI+
Sbjct: 614 TSVANNGIAPYKTVLTHGFVLDEQGRKMSKSLGNVVD-----------PAV------VIN 656
Query: 848 AHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGV 907
YG DVLR WV++ VP+GKNIL D +KIR++ R+LLG
Sbjct: 657 E------------YGADVLRLWVSS-VDYSADVPLGKNILKQQADVYRKIRNTARFLLGN 703
Query: 908 LHNHSESTGSISRY----VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSA 963
LH+ + ++S +D YML R+ E + + FQ+ R + + NF V +LS
Sbjct: 704 LHDFDPAKNAVSYEELPELDRYMLHRMTEVFTEVKDAFDSFQFFRFFQTVQNFCVVDLSN 763
Query: 964 FYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
FY + KDRLY + + R S L L R +AP++ HLAE+++ ++P
Sbjct: 764 FYLDIAKDRLYISAEDSLRRRSCQTVLAIAVESLARAIAPVLCHLAEDIWQYIP 817
Score = 326 bits (835), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 244/422 (57%), Gaps = 48/422 (11%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
FILHDGPPYANG HIGHA+NKILKD R +LQG++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGQLHIGHALNKILKDTINRYQMLQGRKVRYVPGWDCHGLPIELKVLQDM 112
Query: 81 D----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ L+ +++R++A++FA+ T+ Q+ F+ +G+ +WEH Y T EY Q+
Sbjct: 113 KPALRQKLTTIELRRQARDFAIATMEQQREGFKRYGIWGNWEH-PYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI---KLNQVPAHLL 193
F + + YIYR +KPV+WSPSS+TALAE+ELEY H S+SIY+ + KL + L
Sbjct: 172 FAQMVLKGYIYRGMKPVHWSPSSKTALAEAELEYPEGHTSRSIYVALAIAKLAKSAKALT 231
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG--------------------- 232
+LH +WTTTPW++PAN +A NP L Y+V G
Sbjct: 232 PYLPNLHLAVWTTTPWTIPANLAVAVNPDLTYAVVKFSGEGLSTNGAQNSPESEELSAIE 291
Query: 233 ---------------ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQ 277
+IVA LVE L T T +EV+ G+ L+ TY HP+
Sbjct: 292 LKKTPENKELSTKVEKTLIVAADLVEKLSATLNTKLEVLATIQGKDLEKSTYKHPLFDRI 351
Query: 278 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 337
+ ++ ++++ GTGLVH AP HGQ+D+ + +P+L+ + + G ++ +AG E
Sbjct: 352 SPV-VIGGDYITADSGTGLVHTAPGHGQEDYQVGQRYGLPLLSPVDDNGNFTAEAGQ-FE 409
Query: 338 GLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 395
GLN+LGDG V+ + ++ E Y HSYPYDWRTKKP I +A++QWF E +
Sbjct: 410 GLNVLGDGNGAVIDALAGAGALIKEEVYAHSYPYDWRTKKPTIFRATEQWFASVEGFREA 469
Query: 396 AL 397
AL
Sbjct: 470 AL 471
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 101/172 (58%), Gaps = 5/172 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ +AG EGLN+LG+G V+ + ++ E Y HSYPYDWRTKKP
Sbjct: 392 LSPVDDNGNFTAEAGQ-FEGLNVLGDGNGAVIDALAGAGALIKEEVYAHSYPYDWRTKKP 450
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + AL + V ++P + + ++ R WCISRQR WGVPI
Sbjct: 451 TIFRATEQWFASVEGFREAALKAIADVKWIPAQGENRITAMVSDRSDWCISRQRSWGVPI 510
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVT 1273
P FYD +T ++NE I H + + G D WW LP+E+LL S N+ T
Sbjct: 511 PAFYDEETGEPLLNEETIAHVQAIFAQKGSDAWWELPIEELLPESYRNNGKT 562
>gi|254432512|ref|ZP_05046215.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
gi|197626965|gb|EDY39524.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
Length = 990
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 341/646 (52%), Gaps = 72/646 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHAL------------------ 459
TALAE+ELEY H S S+Y+ + VP+ L A+ L A+
Sbjct: 199 TALAEAELEYPDGHTSPSVYVAFPVEAVPSVL---ASRLRAVGIEVEDSGQMGGHRRPIT 255
Query: 460 ----IWTTTPWSLPANQFIAFNPALEYSVASVKGAN-----VIVAKCLVENLKWTFQTDI 510
IWTTTPW+LPAN I+ N L+YS+ V G + ++VA LV L+ T +
Sbjct: 256 LSMAIWTTTPWTLPANLAISVNGKLDYSICEVNGGDSLSNHLVVATELVATLEQTLGLTL 315
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 570
+ G+ L+ Y HP+ E+R ++ ++++ GTGLVH AP HG DDF
Sbjct: 316 KPLLSLKGEELEGSVYRHPL-LERRGQVVIGGDYITTEAGTGLVHTAPGHGVDDFNTGRK 374
Query: 571 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWTEN-YQHSYPYDW 628
+PVL + G + +AGP G N+L D ++ L E VL +E Y+H YPYDW
Sbjct: 375 YGLPVLCPVDEAGTLTEEAGP-FAGTNVLKDANPTIVAALREAGVLISEQRYEHRYPYDW 433
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
RTKKP I +A++QWF E + AL + V ++P S + + +++R WCISRQR
Sbjct: 434 RTKKPTIFRATEQWFASVEGFRQAALEAIARVEWLPASGRNRIEAMVSERGDWCISRQRT 493
Query: 689 WGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTK 744
WGVPIPVFY T +++ EA + H LI EHG D WW LL +D K
Sbjct: 494 WGVPIPVFYHRTTGEVLLTEATLSHIQALIAEHGADVWWERDEAGLLPPELADQADQWRK 553
Query: 745 SNDILDIWFDSGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRN 800
D +D+WFDSG SW+ VL+++ PA +Y+EG DQ GWF SSLLTSVA+ AP+R
Sbjct: 554 GTDTMDVWFDSGSSWAGVLQERGLRYPADLYLEGSDQHRGWFQSSLLTSVAVNGEAPYRR 613
Query: 801 VFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPA 860
V HGF +DEKG KMSKS+GNV+ + +G + K+ PA
Sbjct: 614 VLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGRN--------------------EKQEPA 653
Query: 861 YGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR 920
YG DVLR WV++ VP+G I+ D +K+R++ RYLLG LH+ +
Sbjct: 654 YGADVLRLWVSS-VDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPRPAAAGG 712
Query: 921 Y---------VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
+ +D +ML+R + + +G +++ R + L NF V +LS Y + KD
Sbjct: 713 HAIPLEELPLLDQWMLQRTAALVDAVSGDFGRYEFYRFFQALQNFCVVDLSNVYLDIAKD 772
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
RLY + R S L + L +AP++ H+AE+++ +LP
Sbjct: 773 RLYVSAAGDFRRRSCQTVLSLVVERLAGLIAPVLCHMAEDIWQNLP 818
Score = 328 bits (841), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/415 (43%), Positives = 242/415 (58%), Gaps = 39/415 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NKILKDI ++ LLQG+R +VPGWDCHGLPIELK
Sbjct: 51 NPGPVFTLHDGPPYANGALHVGHALNKILKDIINKTALLQGRRARFVPGWDCHGLPIELK 110
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ +S+ L+PL +R KA +ALE + QKA F+ WG+ ADWE Y T K Y
Sbjct: 111 VLQGLKSSERAALTPLGLRHKAHAYALEQVEGQKAGFQRWGIWADWEQP-YLTLQKSYEA 169
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y+ + VP+
Sbjct: 170 AQIGVFGAMVLAGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPVEAVPSV 229
Query: 192 LLEGATDLHAL----------------------IWTTTPWSLPANQFIAFNPALEYSVAS 229
L A+ L A+ IWTTTPW+LPAN I+ N L+YS+
Sbjct: 230 L---ASRLRAVGIEVEDSGQMGGHRRPITLSMAIWTTTPWTLPANLAISVNGKLDYSICE 286
Query: 230 VKGAN-----VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
V G + ++VA LV +L+ T ++ + G+ L+ Y HP+ E+R ++
Sbjct: 287 VNGGDSLSNHLVVATELVATLEQTLGLTLKPLLSLKGEELEGSVYRHPL-LERRGQVVIG 345
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGD 344
++++ GTGLVH AP HG DDF +PVL + G + +AGP G N+L D
Sbjct: 346 GDYITTEAGTGLVHTAPGHGVDDFNTGRKYGLPVLCPVDEAGTLTEEAGP-FAGTNVLKD 404
Query: 345 GKDQVL-HLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ L E VL +E Y+H YPYDWRTKKP I +A++QWF E + AL
Sbjct: 405 ANPTIVAALREAGVLISEQRYEHRYPYDWRTKKPTIFRATEQWFASVEGFRQAAL 459
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTEN-YQHSYPYDWRTKKPVIL 1166
+ G + +AGP G N+L + ++ L E VL +E Y+H YPYDWRTKKP I
Sbjct: 383 VDEAGTLTEEAGP-FAGTNVLKDANPTIVAALREAGVLISEQRYEHRYPYDWRTKKPTIF 441
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + AL + V ++P S + + +++R WCISRQR WGVPIPVF
Sbjct: 442 RATEQWFASVEGFRQAALEAIARVEWLPASGRNRIEAMVSERGDWCISRQRTWGVPIPVF 501
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
Y T +++ EA + H LI EHG D WW
Sbjct: 502 YHRTTGEVLLTEATLSHIQALIAEHGADVWW 532
>gi|148238671|ref|YP_001224058.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
gi|147847210|emb|CAK22761.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
Length = 968
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/631 (37%), Positives = 338/631 (53%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP--------AHLLEGATDLHAL-------IWT 462
TALAE+ELEY H S S+Y+ +VP +H +E D AL IWT
Sbjct: 204 TALAEAELEYPDGHTSPSVYVAFPAVEVPVPLRETLQSHGVELPADAAALGQALQVAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y+ V G ++VA L+E+L T + + G L
Sbjct: 264 TTPWTLPANLAVSVNERLDYALVDDGNGRLLVVAAELIESLSKTLERPLQQRATVKGALL 323
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y HP+ + ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 324 AGLVYRHPLLDRTSPV-VIGGDYITTESGTGLVHTAPGHGVDDFHTGQKHGLPVLCPVDE 382
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AGP GLN+L D ++ +E +L E Y H YPYDWRTKKP I +A+
Sbjct: 383 AGTLTAEAGP-FAGLNVLKDANPGIIEALEQAGALLKQEAYSHRYPYDWRTKKPTIFRAT 441
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF E + +AL +++V + P S + + + +R WCISRQR WGVPIPVFY
Sbjct: 442 EQWFASVEGFRQDALDAIDQVQWTPASGRNRIEAMVKERGDWCISRQRTWGVPIPVFYHR 501
Query: 698 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDS 755
+++N + H TLI HG D WW LL +D K D +D+WFDS
Sbjct: 502 SNGEVLLNADTLSHIETLIAAHGGDVWWEKDEADLLPPAYADQADQWRKGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE
Sbjct: 562 GSSWAAVSSQRESLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKRVLTHGFALDE 621
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I +G K K+ PAYG DVLR WV
Sbjct: 622 KGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPAYGADVLRLWV 661
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ + +T +I+ +D +M
Sbjct: 662 SS-VDYSTDVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATDAIAVEDLPLLDRWM 720
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E + + + +++ R ++L NF V +LS FY + KDRLY + R S
Sbjct: 721 LQRTAEVMDEITEAFESYEFFRFFQLLQNFCVTDLSNFYLDIAKDRLYVSAPADRRRRSC 780
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ +LP
Sbjct: 781 QTVMALIIERLAGLIAPVLCHMAEDIWQNLP 811
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 238/404 (58%), Gaps = 25/404 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKD+ + +LQG+RV YVPGWDCHGLPIELK
Sbjct: 56 NSGPTFTLHDGPPYANGALHMGHALNKVLKDVINKYQVLQGRRVRYVPGWDCHGLPIELK 115
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D + L+P+ +RKKA +A + ++ Q F+ WG+ ADW+ Y T KEY
Sbjct: 116 VLQSMDQEQRQALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWDQP-YLTLQKEYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP-- 189
Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y+ +VP
Sbjct: 175 AQIKVFGEMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAVEVPVP 234
Query: 190 ------AHLLEGATDLHAL-------IWTTTPWSLPANQFIAFNPALEYS-VASVKGANV 235
+H +E D AL IWTTTPW+LPAN ++ N L+Y+ V G +
Sbjct: 235 LRETLQSHGVELPADAAALGQALQVAIWTTTPWTLPANLAVSVNERLDYALVDDGNGRLL 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+VA L+ESL T + ++ G L + Y HP+ + ++ ++++ GTG
Sbjct: 295 VVAAELIESLSKTLERPLQQRATVKGALLAGLVYRHPLLDRTSPV-VIGGDYITTESGTG 353
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG DDF +PVL + G + +AGP GLN+L D ++ +E
Sbjct: 354 LVHTAPGHGVDDFHTGQKHGLPVLCPVDEAGTLTAEAGP-FAGLNVLKDANPGIIEALEQ 412
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E Y H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 413 AGALLKQEAYSHRYPYDWRTKKPTIFRATEQWFASVEGFRQDAL 456
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ +E +L E Y H YPYDWRTKKP I
Sbjct: 380 VDEAGTLTAEAGP-FAGLNVLKDANPGIIEALEQAGALLKQEAYSHRYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL ++ V + P S + + + +R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASVEGFRQDALDAIDQVQWTPASGRNRIEAMVKERGDWCISRQRTWGVPIPVF 498
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +++N + H TLI HG D WW LL
Sbjct: 499 YHRSNGEVLLNADTLSHIETLIAAHGGDVWWEKDEADLL 537
>gi|225432320|ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera]
Length = 1105
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/646 (37%), Positives = 353/646 (54%), Gaps = 72/646 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP----AHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY HISKSIY +L P L + DL IWTTTPW++PAN
Sbjct: 305 TALAEAELEYPEGHISKSIYAIFRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANAA 364
Query: 474 IAFNPALEYSVASV-------------------------KGANVIVAKCLVENLKWTFQT 508
+A N L+YSV V K ++VA LV L+ +
Sbjct: 365 VAVNAKLQYSVVEVHSPLEDVSKSKQNEKGRLGNALKEQKNLFLVVASDLVPTLEAKWGL 424
Query: 509 DIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLL 567
+ + G L++ YIHPI+K R+ ++ G ++++ GTGLVH AP HGQ+D++
Sbjct: 425 KLVIKKTLLGSDLENCRYIHPIDK--RECPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 482
Query: 568 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYP 625
+ +P+L+ + + GK++ +AG GL++LGDG V+ ++ + ++ E Y+H YP
Sbjct: 483 GMKYGLPILSPVDDDGKFTEEAGQ-FSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYP 541
Query: 626 YDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISR 685
YDWRTKKP I +A++QWF E + A+ + +V ++P A+ + + R WCISR
Sbjct: 542 YDWRTKKPTIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQAENRISAMTSSRSDWCISR 601
Query: 686 QRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN--SN 741
QR WGVPIPVFY ++N+ I H +++ + G D WW ++VE+LL N S
Sbjct: 602 QRTWGVPIPVFYHVQSKEPLMNKETIDHVKSIVSQKGSDAWWYMTVEELLPDKYRNKASG 661
Query: 742 VTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTA 796
K D +D+WFDSG SW+ VL+ + PA +Y+EG DQ GWF SSLLTSVA K A
Sbjct: 662 YEKGTDTMDVWFDSGSSWAAVLESRNELSCPADLYLEGTDQHRGWFQSSLLTSVATKGRA 721
Query: 797 PFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAK 856
P+ +V HGFV+DEKG KMSKS+GNV+ + +G K L K
Sbjct: 722 PYSSVITHGFVLDEKGFKMSKSLGNVVDPRTVIEGGKNL--------------------K 761
Query: 857 KLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
+ P YG DVLR WV++ + IG +L D +K+R +LRYLL LH+
Sbjct: 762 EAPGYGADVLRLWVSSVDYTGDAM-IGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA 820
Query: 917 SISRYVDVYMLKR--LCEFQNTMDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
Y D+ M+ R L + +N + + Y +Q+ + +++ F + +LS FYF + KD
Sbjct: 821 --VPYCDLPMIDRHALFQLENVVKNIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKD 878
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
RLY R S L ++R +API+PHLAE+V+ +LP
Sbjct: 879 RLYVGGTTSFTRRSCQTVLAAHLLSIVRVIAPILPHLAEDVWQNLP 924
Score = 327 bits (837), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/420 (43%), Positives = 249/420 (59%), Gaps = 40/420 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +VHYVPGWDCHGLPIELK
Sbjct: 157 NNGGNFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVHYVPGWDCHGLPIELK 216
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D + L+PL +R KA FA T+ Q A F+ +GV DW +N Y T D EY
Sbjct: 217 VLQSLDQDARRELTPLKLRAKASRFAKATVKNQMASFKRYGVWGDW-NNPYLTLDPEYEA 275
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP-- 189
+Q+ F + Q YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY +L P
Sbjct: 276 SQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFRLVSAPVT 335
Query: 190 --AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV----------------- 230
L + DL IWTTTPW++PAN +A N L+YSV V
Sbjct: 336 SGTSLEDFLPDLCLAIWTTTPWTIPANAAVAVNAKLQYSVVEVHSPLEDVSKSKQNEKGR 395
Query: 231 --------KGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKL 282
K ++VA LV +L+ + + + G L++ YIHPI+K R+ +
Sbjct: 396 LGNALKEQKNLFLVVASDLVPTLEAKWGLKLVIKKTLLGSDLENCRYIHPIDK--RECPV 453
Query: 283 LPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNI 341
+ G ++++ GTGLVH AP HGQ+D++ + +P+L+ + + GK++ +AG GL++
Sbjct: 454 VIGGDYITTESGTGLVHTAPGHGQEDYVTGMKYGLPILSPVDDDGKFTEEAGQ-FSGLDV 512
Query: 342 LGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
LGDG V+ ++ + ++ E Y+H YPYDWRTKKP I +A++QWF E + A+
Sbjct: 513 LGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKPTIFRATEQWFASVEGFRQVAMTA 572
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + + GK++ +AG GL++LG+G V+ ++ + ++ E Y+H YPYDWRTKKP
Sbjct: 491 LSPVDDDGKFTEEAGQ-FSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKP 549
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + A+ + V ++P A+ + + R WCISRQR WGVPI
Sbjct: 550 TIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQAENRISAMTSSRSDWCISRQRTWGVPI 609
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY ++N+ I H +++ + G D WW + VE+LL
Sbjct: 610 PVFYHVQSKEPLMNKETIDHVKSIVSQKGSDAWWYMTVEELL 651
>gi|328875644|gb|EGG24008.1| isoleucyl-tRNA synthetase [Dictyostelium fasciculatum]
Length = 1038
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/625 (36%), Positives = 352/625 (56%), Gaps = 52/625 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP-AHLLEGAT---DLHALIWTTTPWSLPANQF 473
TALA++ELEY +H+S+SI++K + Q AH+L + +HA+IWTTTPW++PANQ
Sbjct: 261 TALADAELEYNDNHVSQSIFVKFAVTQSSNAHILAAMSRGDKVHAVIWTTTPWTIPANQA 320
Query: 474 IAFNPALEYSVAS---VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
I N LEYS+ + +IV+ + +L+ F D++VV F G L+ +HP
Sbjct: 321 ICVNAQLEYSLVKHDKIDNHLLIVSSERLASLRSAFGLDLEVVATFTGAQLEGTQTVHP- 379
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+ R +L V + G+GLVH AP HG +DF + I VL+ + ++G+++ + G
Sbjct: 380 -QYNRPSPVLLGDHVVAGSGSGLVHTAPGHGMEDFAICAQHNIAVLSPVDDEGRFTKEVG 438
Query: 591 PGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
G+ +LG G V+ + +L E Y H YPYDWRTKKP++++ ++QWF+D
Sbjct: 439 DKFVGMEVLGGGNTAVIEDLSQLGCLLHQEKYTHKYPYDWRTKKPILIRTTRQWFVDLTD 498
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNE 706
+ A+ + VN VP S L + +R WCISRQR WGVPIPVFY+ +T ++N+
Sbjct: 499 VHQSAIQAINAVNMVPPSGSNRLSSMVGRRSDWCISRQRFWGVPIPVFYEKETGEALIND 558
Query: 707 ANIKHFCTLIDEH-GPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H + +H G D W+ V LL + K +D +D+WFDSG SW VL
Sbjct: 559 ETIQHILEVFRKHGGADSWFERDVADLLPEKYRSESHKYVKGSDTMDVWFDSGTSWRGVL 618
Query: 764 --------KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
+D A +Y+EG DQ GWF SSLLTSV + AP+RNV HGF++DEKG KM
Sbjct: 619 VQRGIISKEDGVADIYLEGSDQHRGWFQSSLLTSVCARGIAPYRNVVTHGFLLDEKGMKM 678
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA- 874
SKS+GN ++ + I G + PAYGVD+LR WVA+
Sbjct: 679 SKSLGNTMAPNLIVSGGP--------------------NKTENPAYGVDMLRMWVASSDY 718
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRL 930
S+D + IG NIL ++++KIR++++++LG + + I +D + L ++
Sbjct: 719 SRD--ISIGPNILIKLLENIKKIRNTVKFMLGSNFDFNPELNQIDYNQLSDLDKFALHKV 776
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
+ Y +FQY++A + LN VNE+S+FYF ++K RLY +S + R S L
Sbjct: 777 FLLEQNASKYYDQFQYSKAMQE-LNIFVNEISSFYFDVIKQRLYVESKDNILRRSSQTVL 835
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSH 1015
++ V+ + +AP+ H +E++Y+H
Sbjct: 836 FHMLDVVNKILAPVTVHTSEDIYNH 860
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/415 (43%), Positives = 257/415 (61%), Gaps = 17/415 (4%)
Query: 6 ELYSWQR-EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY WQ + G ++ HDGPPYANG H+GHA+NKILKDIT R +L+G RV+Y+PG
Sbjct: 102 QLYKWQETNNVEGGKTWVFHDGPPYANGDLHLGHALNKILKDITNRYKMLRGHRVNYIPG 161
Query: 65 WDCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WDCHGLPIE KA S K ++P++IRK AK +A + I Q A F SWG++ DWE
Sbjct: 162 WDCHGLPIESKAFESIRREKSDRMTPVEIRKTAKAYAEKEIRKQMASFRSWGIMGDWE-A 220
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T +Y QL FY++YK+ Y+YR +KPV+WSPSSRTALA++ELEY +HVS+SI+
Sbjct: 221 PYITMAPDYEVAQLETFYDMYKRGYVYRGIKPVHWSPSSRTALADAELEYNDNHVSQSIF 280
Query: 181 LKIKLNQVP-AHLLEGAT---DLHALIWTTTPWSLPANQFIAFNPALEYSVA---SVKGA 233
+K + Q AH+L + +HA+IWTTTPW++PANQ I N LEYS+ +
Sbjct: 281 VKFAVTQSSNAHILAAMSRGDKVHAVIWTTTPWTIPANQAICVNAQLEYSLVKHDKIDNH 340
Query: 234 NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
+IV+ + SL+ F D+EVV F G L+ +HP + R +L V + G
Sbjct: 341 LLIVSSERLASLRSAFGLDLEVVATFTGAQLEGTQTVHP--QYNRPSPVLLGDHVVAGSG 398
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
+GLVH AP HG +DF + I VL+ + ++G+++ + G G+ +LG G V+ +
Sbjct: 399 SGLVHTAPGHGMEDFAICAQHNIAVLSPVDDEGRFTKEVGDKFVGMEVLGGGNTAVIEDL 458
Query: 354 EP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNIL 406
+L E Y H YPYDWRTKKP++++ ++QWF+D + A+ N++
Sbjct: 459 SQLGCLLHQEKYTHKYPYDWRTKKPILIRTTRQWFVDLTDVHQSAIQAINAVNMV 513
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + ++G+++ + G G+ +LG G V+ + +L E Y H YPYDWRTKKP
Sbjct: 424 LSPVDDEGRFTKEVGDKFVGMEVLGGGNTAVIEDLSQLGCLLHQEKYTHKYPYDWRTKKP 483
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
++++ ++QWF+D + A+ + VN VP S L + +R WCISRQR WGVPI
Sbjct: 484 ILIRTTRQWFVDLTDVHQSAIQAINAVNMVPPSGSNRLSSMVGRRSDWCISRQRFWGVPI 543
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEH-GPDFWWSLPVEQLL 1263
PVFY+ +T ++N+ I+H + +H G D W+ V LL
Sbjct: 544 PVFYEKETGEALINDETIQHILEVFRKHGGADSWFERDVADLL 586
>gi|449015875|dbj|BAM79277.1| isoleucine--tRNA ligase [Cyanidioschyzon merolae strain 10D]
Length = 1079
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/637 (37%), Positives = 348/637 (54%), Gaps = 61/637 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD------LHALIWTTTPWSLPAN 471
TALAE+ELEY H+S+S Y+ ++ V A L G IWTTTPW++PAN
Sbjct: 300 TALAEAELEYPDVHVSRSAYVAFEV--VDAGKLRGIISELEFDSFRVAIWTTTPWTIPAN 357
Query: 472 QFIAFNPALEYSVASVKGAN------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
+ +A NP L YS+ +++ ++VA+ LVE L+ + PG L +T
Sbjct: 358 RAVAVNPNLPYSIVALEDEQGKPCTLLVVAQDLVETLEQKLHRPLSNKKIVPGSELVGMT 417
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
Y HP+ + + ++++ GTGLVH AP HG +D+ + L E + V + + G++
Sbjct: 418 YRHPLYPMEVYRVVAGGDYITTESGTGLVHTAPGHGLEDYNVGLRESLEVFAPVDDVGRF 477
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWF 643
+ DAGP L GL +L +G +VL L+ +L E Y+H YPYDWRT++P I++A++QWF
Sbjct: 478 TSDAGPELAGLPVLQEGNARVLELLRSSNALLLEEKYEHKYPYDWRTREPTIVRATEQWF 537
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
+ + +AL L+ V +VP + + +R I R WCISRQR WGVPIPVFYD DT
Sbjct: 538 ASVRQFRDKALEALQSVQWVPPAGENRIRGMIESRDDWCISRQRPWGVPIPVFYDEDTGE 597
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISW 759
+++ I++ + +HG D WW+L +EQLL S + + + + D +D+WFDSG SW
Sbjct: 598 AVISMEIIQYVSEIFAKHGSDAWWTLPIEQLLPASIIQTGRRLRRGLDTMDVWFDSGSSW 657
Query: 760 SHVLKDKP------------AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFV 807
+ + K A +Y+EG DQ GWF SSLLTSVA++ APFR V HGFV
Sbjct: 658 ASLSKSHGEGSSSSWLPSVVADLYLEGSDQHRGWFQSSLLTSVAVRGYAPFRAVLTHGFV 717
Query: 808 VDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLR 867
+DEKG KMSKS+GNV+ +I G Q KK PA G DVLR
Sbjct: 718 LDEKGLKMSKSLGNVVDPSEIINGG--------------------QNQKKQPALGADVLR 757
Query: 868 WWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSE----STGSISRY-- 921
WVA+ V IG IL + D +KIR++LR+L G + E S +++
Sbjct: 758 LWVAS-VDYMSDVLIGPTILKQTADAYRKIRNTLRFLAGNVPRWDETCPVSVNALNDANL 816
Query: 922 --VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSIN 979
+D Y+L+R ++ Y F + R + +L F V +LS FY + KDR Y + +
Sbjct: 817 PSLDRYILRRAAAVLKDIEDAYKNFTFNRIFQSVLRFCVADLSNFYLDIAKDRCYVAAPD 876
Query: 980 GEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1016
R + T+ I + R +API+PH E+++ L
Sbjct: 877 EPRRQTCQATMWAILMDMARALAPILPHTVEDLWQCL 913
Score = 330 bits (845), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 243/396 (61%), Gaps = 21/396 (5%)
Query: 20 EFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS 79
EF+LHDGPPYANG+ H+GHA+NKILKDI R +L GKRV +VPGWDCHGLPIELKA+ S
Sbjct: 156 EFLLHDGPPYANGSLHMGHALNKILKDIINRYFILCGKRVRFVPGWDCHGLPIELKAVQS 215
Query: 80 K----DKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
+ L PL IR A+ FALE I Q+ F+ +GV W + Y T D +Y Q+
Sbjct: 216 ARSNHREALDPLQIRLLARKFALEAIEEQRKGFKRYGVWGTW-NAPYLTLDHQYEAAQVR 274
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG 195
F ++ + YIYR KPVYWSPSSRTALAE+ELEY HVS+S Y+ ++ V A L G
Sbjct: 275 IFGEMFLKGYIYRGRKPVYWSPSSRTALAEAELEYPDVHVSRSAYVAFEV--VDAGKLRG 332
Query: 196 AT------DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------VIVAKCLVE 243
IWTTTPW++PAN+ +A NP L YS+ +++ ++VA+ LVE
Sbjct: 333 IISELEFDSFRVAIWTTTPWTIPANRAVAVNPNLPYSIVALEDEQGKPCTLLVVAQDLVE 392
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L+ + PG L +TY HP+ + + ++++ GTGLVH AP H
Sbjct: 393 TLEQKLHRPLSNKKIVPGSELVGMTYRHPLYPMEVYRVVAGGDYITTESGTGLVHTAPGH 452
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
G +D+ + L E + V + + G+++ DAGP L GL +L +G +VL L+ +L E
Sbjct: 453 GLEDYNVGLRESLEVFAPVDDVGRFTSDAGPELAGLPVLQEGNARVLELLRSSNALLLEE 512
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y+H YPYDWRT++P I++A++QWF + + +AL
Sbjct: 513 KYEHKYPYDWRTREPTIVRATEQWFASVRQFRDKAL 548
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ + G+++ DAGP L GL +L EG +VL L+ +L E Y+H YPYDWRT++P I+
Sbjct: 471 VDDVGRFTSDAGPELAGLPVLQEGNARVLELLRSSNALLLEEKYEHKYPYDWRTREPTIV 530
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + +AL L+ V +VP + + +R I R WCISRQR WGVPIPVF
Sbjct: 531 RATEQWFASVRQFRDKALEALQSVQWVPPAGENRIRGMIESRDDWCISRQRPWGVPIPVF 590
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSN 1271
YD DT +++ I++ + +HG D WW+LP+EQLL S + +
Sbjct: 591 YDEDTGEAVISMEIIQYVSEIFAKHGSDAWWTLPIEQLLPASIIQTG 637
>gi|326435250|gb|EGD80820.1| isoleucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
Length = 1096
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/640 (38%), Positives = 350/640 (54%), Gaps = 69/640 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA--------------------TDLH 457
TALAE+E+EY +H S SI++++ L V L+ A ++
Sbjct: 297 TALAEAEIEYD-EHTSTSIFVRLPL--VVGDSLKRAITSSDGAANTAAAAATSTTPVNVS 353
Query: 458 ALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVV 513
A+IWTTTPW+LPANQ IA + L Y + A V+ CL K+ + ++
Sbjct: 354 AVIWTTTPWTLPANQAIAVHSDLGYVLVQETKAGGDVMVVAEACLDRCRKFLPEGTTRII 413
Query: 514 CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI 573
G+ L D +Y HP+ E R + A V+S GTG+VH APAHG +D+ A +
Sbjct: 414 GHIQGRELLDSSYRHPV-WEGRTCPVFHADHVTSDAGTGVVHMAPAHGLEDYHACAANGM 472
Query: 574 PV-LNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRT 630
+ LNL+ N G+Y+ DAG L+GL +G G +VL L++ +L E +QH YP DWRT
Sbjct: 473 QIDLNLVDNTGRYTQDAGDALQGLEAMGAGGKKVLELLQEGNRLLQQEAFQHRYPLDWRT 532
Query: 631 KKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWG 690
KKP++L+A+QQWF + IK ALA L+ V VPE + L + R WC+SRQRVWG
Sbjct: 533 KKPIMLRATQQWFAQLQDIKHAALAALDNVQLVPEQGRTRLSSMLGLRDEWCVSRQRVWG 592
Query: 691 VPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSN 746
VPI VF DT ++ + H +I HG D WW+L ++L VT KS
Sbjct: 593 VPIAVFCRDDTGEAHLSSEYVDHIVNVIATHGSDAWWTLPDDELFPEYMREPGVTYSKSA 652
Query: 747 DILDIWFDSGISWSHVL-----KDKPAHVYMEGMDQINGWFMSSLLTSV------ALKHT 795
D +D+WFDSG SW+ V ++ A VY+EG DQ GWF SSLLT + T
Sbjct: 653 DTMDVWFDSGTSWNAVTARAHGREATADVYLEGSDQHRGWFQSSLLTKITDDVTTGRTPT 712
Query: 796 APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGA 855
APF+ + HGFV+DE+ KMSKS+GN + + G L
Sbjct: 713 APFKTIITHGFVLDEENRKMSKSLGNGVDPRIVINGGPNL-------------------- 752
Query: 856 KKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSEST 915
KK PAYG DVLR W A+ A + V IG + L+ + ++++KIR+S R++LG L + S T
Sbjct: 753 KKEPAYGADVLRLWAASTAYQH-DVNIGPSTLSITAENLRKIRNSCRFMLGNLADFSLET 811
Query: 916 GSISRYVDV--YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
++S D+ YML R+ + M Y + + RA++ LLNF+ +LS+FYF + KDRL
Sbjct: 812 DAVSDLSDLDKYMLHRISQLDAGMRASYESYNFLRATQDLLNFINTDLSSFYFEISKDRL 871
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
Y S G +R + +H+I ++ V+P+ HLAEEV+
Sbjct: 872 YLSSPTGASRRAAQTVVHHILDFVVHAVSPVACHLAEEVH 911
Score = 305 bits (782), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 174/431 (40%), Positives = 243/431 (56%), Gaps = 47/431 (10%)
Query: 10 WQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
++ A P FILHDGPP+ANG H+GH +NK LKD+ +R ++G R+ +VPGWDCHG
Sbjct: 132 YEELAARDGPAFILHDGPPFANGNLHMGHVLNKALKDMIVRYKAIRGHRISFVPGWDCHG 191
Query: 70 LPIELKAIT-----------SKDKLLS----PLDIRKKAKNFALETINTQKAEFESWGVL 114
LPIE KA+T SK K L+ P IRK A+ A I QK +F GV+
Sbjct: 192 LPIEAKAVTSTSASSGTADASKPKGLTIASDPRRIRKAARKLAEGAIKEQKTDFVRLGVM 251
Query: 115 ADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDH 174
ADW+H Y T +Y +Q+ F + + + R +PVYWSPSS+TALAE+E+EY +H
Sbjct: 252 ADWDHP-YLTLHPQYEADQVALFLRMMQAGMVQRRYRPVYWSPSSQTALAEAEIEYD-EH 309
Query: 175 VSKSIYLKIKLNQVPAHLLEGA--------------------TDLHALIWTTTPWSLPAN 214
S SI++++ L V L+ A ++ A+IWTTTPW+LPAN
Sbjct: 310 TSTSIFVRLPL--VVGDSLKRAITSSDGAANTAAAAATSTTPVNVSAVIWTTTPWTLPAN 367
Query: 215 QFIAFNPALEYSVASVKGAN----VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYI 270
Q IA + L Y + A V+ CL K+ + ++ G+ L D +Y
Sbjct: 368 QAIAVHSDLGYVLVQETKAGGDVMVVAEACLDRCRKFLPEGTTRIIGHIQGRELLDSSYR 427
Query: 271 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPV-LNLITNQGKYS 329
HP+ E R + A V+S GTG+VH APAHG +D+ A + + LNL+ N G+Y+
Sbjct: 428 HPV-WEGRTCPVFHADHVTSDAGTGVVHMAPAHGLEDYHACAANGMQIDLNLVDNTGRYT 486
Query: 330 PDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFI 387
DAG L+GL +G G +VL L++ +L E +QH YP DWRTKKP++L+A+QQWF
Sbjct: 487 QDAGDALQGLEAMGAGGKKVLELLQEGNRLLQQEAFQHRYPLDWRTKKPIMLRATQQWFA 546
Query: 388 DTERIKPEALV 398
+ IK AL
Sbjct: 547 QLQDIKHAALA 557
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
LNL+ N G+Y+ DAG L+GL +G G +VL L++ +L E +QH YP DWRTKKP
Sbjct: 476 LNLVDNTGRYTQDAGDALQGLEAMGAGGKKVLELLQEGNRLLQQEAFQHRYPLDWRTKKP 535
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
++L+A+QQWF + IK ALA L+ V VPE + L + R WC+SRQRVWGVPI
Sbjct: 536 IMLRATQQWFAQLQDIKHAALAALDNVQLVPEQGRTRLSSMLGLRDEWCVSRQRVWGVPI 595
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VF DT ++ + H +I HG D WW+LP ++L
Sbjct: 596 AVFCRDDTGEAHLSSEYVDHIVNVIATHGSDAWWTLPDDELF 637
>gi|297736880|emb|CBI26081.3| unnamed protein product [Vitis vinifera]
Length = 1221
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 242/646 (37%), Positives = 352/646 (54%), Gaps = 72/646 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP----AHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY HISKSIY +L P L + DL IWTTTPW++PAN
Sbjct: 421 TALAEAELEYPEGHISKSIYAIFRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANAA 480
Query: 474 IAFNPALEYSVASV-------------------------KGANVIVAKCLVENLKWTFQT 508
+A N L+YSV V K ++VA LV L+ +
Sbjct: 481 VAVNAKLQYSVVEVHSPLEDVSKSKQNEKGRLGNALKEQKNLFLVVASDLVPTLEAKWGL 540
Query: 509 DIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLL 567
+ + G L++ YIHPI+K R+ ++ G ++++ GTGLVH AP HGQ+D++
Sbjct: 541 KLVIKKTLLGSDLENCRYIHPIDK--RECPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 598
Query: 568 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYP 625
+ +P+L+ + + GK++ +AG GL++LGDG V+ ++ + ++ E Y+H YP
Sbjct: 599 GMKYGLPILSPVDDDGKFTEEAGQ-FSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYP 657
Query: 626 YDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISR 685
YDWRTKKP I +A++QWF E + A+ + +V ++P A+ + + R WCISR
Sbjct: 658 YDWRTKKPTIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQAENRISAMTSSRSDWCISR 717
Query: 686 QRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN--SN 741
QR WGVPIPVFY ++N+ I H +++ + G D WW ++VE+LL N S
Sbjct: 718 QRTWGVPIPVFYHVQSKEPLMNKETIDHVKSIVSQKGSDAWWYMTVEELLPDKYRNKASG 777
Query: 742 VTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTA 796
K D +D+WFDSG SW+ VL+ + PA +Y+EG DQ GWF SSLLTSVA K A
Sbjct: 778 YEKGTDTMDVWFDSGSSWAAVLESRNELSCPADLYLEGTDQHRGWFQSSLLTSVATKGRA 837
Query: 797 PFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAK 856
P+ +V HGFV+DEKG KMSKS+GNV+ + +G K L K
Sbjct: 838 PYSSVITHGFVLDEKGFKMSKSLGNVVDPRTVIEGGKNL--------------------K 877
Query: 857 KLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
+ P YG DVLR WV++ IG +L D +K+R +LRYLL LH+
Sbjct: 878 EAPGYGADVLRLWVSS-VDYTGDAMIGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA 936
Query: 917 SISRYVDVYMLKR--LCEFQNTMDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
Y D+ M+ R L + +N + + Y +Q+ + +++ F + +LS FYF + KD
Sbjct: 937 --VPYCDLPMIDRHALFQLENVVKNIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKD 994
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
RLY R S L ++R +API+PHLAE+V+ +LP
Sbjct: 995 RLYVGGTTSFTRRSCQTVLAAHLLSIVRVIAPILPHLAEDVWQNLP 1040
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 197/348 (56%), Gaps = 36/348 (10%)
Query: 84 LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQ 143
L+PL +R KA FA T+ Q A F+ +GV DW +N Y T D EY +Q+ F + Q
Sbjct: 345 LTPLKLRAKASRFAKATVKNQMASFKRYGVWGDW-NNPYLTLDPEYEASQIEVFGQMALQ 403
Query: 144 DYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP----AHLLEGATDL 199
YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY +L P L + DL
Sbjct: 404 GYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFRLVSAPVTSGTSLEDFLPDL 463
Query: 200 HALIWTTTPWSLPANQFIAFNPALEYSVASV-------------------------KGAN 234
IWTTTPW++PAN +A N L+YSV V K
Sbjct: 464 CLAIWTTTPWTIPANAAVAVNAKLQYSVVEVHSPLEDVSKSKQNEKGRLGNALKEQKNLF 523
Query: 235 VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKG 293
++VA LV +L+ + + + G L++ YIHPI+K R+ ++ G ++++ G
Sbjct: 524 LVVASDLVPTLEAKWGLKLVIKKTLLGSDLENCRYIHPIDK--RECPVVIGGDYITTESG 581
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TGLVH AP HGQ+D++ + +P+L+ + + GK++ +AG GL++LGDG V+ +
Sbjct: 582 TGLVHTAPGHGQEDYVTGMKYGLPILSPVDDDGKFTEEAGQ-FSGLDVLGDGNAAVVRFL 640
Query: 354 EPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ + ++ E Y+H YPYDWRTKKP I +A++QWF E + A+
Sbjct: 641 DENLSIIMEEPYKHKYPYDWRTKKPTIFRATEQWFASVEGFRQVAMTA 688
Score = 136 bits (342), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + + GK++ +AG GL++LG+G V+ ++ + ++ E Y+H YPYDWRTKKP
Sbjct: 607 LSPVDDDGKFTEEAGQ-FSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKP 665
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + A+ + V ++P A+ + + R WCISRQR WGVPI
Sbjct: 666 TIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQAENRISAMTSSRSDWCISRQRTWGVPI 725
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY ++N+ I H +++ + G D WW + VE+LL
Sbjct: 726 PVFYHVQSKEPLMNKETIDHVKSIVSQKGSDAWWYMTVEELL 767
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 48/61 (78%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +VHYVPGWDCHGLPIELK
Sbjct: 146 NNGGNFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVHYVPGWDCHGLPIELK 205
Query: 76 A 76
Sbjct: 206 G 206
>gi|113953240|ref|YP_729567.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
gi|123031893|sp|Q0IDA5.1|SYI_SYNS3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|113880591|gb|ABI45549.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
Length = 968
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 250/640 (39%), Positives = 352/640 (55%), Gaps = 54/640 (8%)
Query: 418 TALAESELEYKPDHISKSIY-----------LKIKLN----QVPAHLLEGATDLHALIWT 462
TALAE+ELEY H S S+Y L+ KLN VPA + L IWT
Sbjct: 204 TALAEAELEYPDGHTSPSVYVGFPVVDLPESLRSKLNAQGLDVPAASDTLSQCLQVAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYSVAS-VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y +A G +IVA L +++ + + G L
Sbjct: 264 TTPWTLPANLAVSVNDRLDYCLADDGNGQLLIVAAELCDSIASKLERPLQAKATVKGADL 323
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
ITY HP+ E+R ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 324 AGITYSHPL-LERRSAIVVGGEYITTESGTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDE 382
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AGP EGLN+L D +++ +E +L E+Y H YPYDWRTKKP I +A+
Sbjct: 383 AGTLTAEAGP-FEGLNVLKDANAKIIAALEDSGSLLLQESYSHRYPYDWRTKKPTIFRAT 441
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG 699
+QWF E + EAL ++ V ++P S + + +++R WCISRQR WGVPIPVFY
Sbjct: 442 EQWFASVEGFRTEALTAIDGVQWLPASGRNRIESMVSERGDWCISRQRTWGVPIPVFYQR 501
Query: 700 DT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS-DVNSNV-TKSNDILDIWFDS 755
+T +++N +I H LI EHG D WW LL +S +++ K D +D+WFDS
Sbjct: 502 ETGEVLLNSDSIAHVKALIAEHGADIWWEKDEVDLLPSSHKAEAHLWRKGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ TAP+R V HGF +DE
Sbjct: 562 GSSWASVSSQRDGLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGTAPYRTVLTHGFALDE 621
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I +G K K+ PAYG DVLR WV
Sbjct: 622 KGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPAYGADVLRLWV 661
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ S +IS +D +M
Sbjct: 662 SS-VDYSADVPIGAGILRQLSDVYRKVRNTSRYLLGNLHDFIPSRDAISISDLPLLDRWM 720
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R + + + +++ R ++L NF V +LS FY + KDRLY + N + R S
Sbjct: 721 LQRTATVLDQISEAFERYEFFRFFQLLQNFCVADLSNFYLDIAKDRLYVSAPNDKRRRSC 780
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ I L +AP++ H+AE+++ ++P GT S F
Sbjct: 781 QTVMALIIERLAAAIAPVLCHMAEDIWQNIPYPTGTESVF 820
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 243/406 (59%), Gaps = 25/406 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKDI + L+QG++V +VPGWDCHGLPIELK
Sbjct: 56 NPGPVFTLHDGPPYANGALHMGHALNKVLKDIINKHRLMQGRKVRFVPGWDCHGLPIELK 115
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + + + L+P+ +RKKA +A + + Q+A F+ WG+ ADW+H Y T K+Y
Sbjct: 116 VLQAMNQEQRQALTPIKLRKKAAAYAHKQVAGQRAGFQRWGIWADWDHP-YLTLQKDYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY----------- 180
Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y
Sbjct: 175 AQIDVFGTMALKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVGFPVVDLPES 234
Query: 181 LKIKLN----QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANV 235
L+ KLN VPA + L IWTTTPW+LPAN ++ N L+Y +A G +
Sbjct: 235 LRSKLNAQGLDVPAASDTLSQCLQVAIWTTTPWTLPANLAVSVNDRLDYCLADDGNGQLL 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
IVA L +S+ + ++ G L ITY HP+ E+R ++ ++++ GTG
Sbjct: 295 IVAAELCDSIASKLERPLQAKATVKGADLAGITYSHPL-LERRSAIVVGGEYITTESGTG 353
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG DDF +PVL + G + +AGP EGLN+L D +++ +E
Sbjct: 354 LVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTAEAGP-FEGLNVLKDANAKIIAALED 412
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+L E+Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 413 SGSLLLQESYSHRYPYDWRTKKPTIFRATEQWFASVEGFRTEALTA 458
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 99/162 (61%), Gaps = 5/162 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP EGLN+L + +++ +E +L E+Y H YPYDWRTKKP I
Sbjct: 380 VDEAGTLTAEAGP-FEGLNVLKDANAKIIAALEDSGSLLLQESYSHRYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL ++GV ++P S + + +++R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASVEGFRTEALTAIDGVQWLPASGRNRIESMVSERGDWCISRQRTWGVPIPVF 498
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
Y +T +++N +I H LI EHG D WW LL +S
Sbjct: 499 YQRETGEVLLNSDSIAHVKALIAEHGADIWWEKDEVDLLPSS 540
>gi|194476997|ref|YP_002049176.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
gi|171192004|gb|ACB42966.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
Length = 967
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 344/633 (54%), Gaps = 58/633 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD---------------LHALIWT 462
TALAE+ELEY DHIS S+Y+ + ++ +L + +IWT
Sbjct: 198 TALAEAELEYPDDHISPSVYVSFPIIELTENLCQELKKQGLALNRIDQNLKRYFDVVIWT 257
Query: 463 TTPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN I+ + +LEY V + ++I+AK LV+NL + G L
Sbjct: 258 TTPWTLPANLGISVSASLEYCVVVDEQNRHLIIAKVLVDNLSTILDRSFKIKATIKGFEL 317
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ + Y +P+ ++ + +L ++++ GTGLVH AP HG DDF + +P+L +
Sbjct: 318 EGLIYRNPL-IDRTNTVILGGDYITTETGTGLVHTAPGHGVDDFNTGHSYNLPILCPVDQ 376
Query: 582 QGKYSPDAGPGLEGLNILGDGKD---QVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 638
G + +AG GLN+L D Q LH+ D++ E+Y H YPYDWRTKKP I +
Sbjct: 377 AGTLTSEAG-AFSGLNVLKDANTSIIQALHITN-DLIKKEDYNHRYPYDWRTKKPTIFRT 434
Query: 639 SQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD 698
++QWF E + +AL ++EV ++P+S + + + +R WCISRQR WGVPIPVFY+
Sbjct: 435 TEQWFASLEGFRKKALEAIQEVVWIPDSGRNRIESMVKERGDWCISRQRTWGVPIPVFYE 494
Query: 699 GDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL---NTSDVNSNVTKSNDILDIWF 753
T +++NE + H LI EHG D WW LL T++ N K D +D+WF
Sbjct: 495 KSTGEVLLNEVTLNHIQKLIAEHGSDVWWEFEEIDLLPPIYTAESN-RWRKGTDTMDVWF 553
Query: 754 DSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVV 808
DSG SW+ V + PA +Y+EG DQ GWF SSLLTS A+ AP++ V HGFV+
Sbjct: 554 DSGSSWASVTSKREGLSYPADLYLEGSDQHRGWFQSSLLTSTAVNGYAPYKKVITHGFVL 613
Query: 809 DEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRW 868
DEKG KMSKS+GN+I I +G K K P YG D+LR
Sbjct: 614 DEKGRKMSKSLGNIIDPASILKGGK--------------------NQKDEPPYGADILRL 653
Query: 869 WVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDV 924
WV++ V IG N+L D +K+R++ RYLLG LH+ + T I +D
Sbjct: 654 WVSS-VDYSVDVSIGSNVLKQLADVYRKVRNTSRYLLGNLHDFTPITDGIDIEELPLLDK 712
Query: 925 YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARL 984
+ML R E + + T + +F++ R + L NF V +LS FY + KDRLY + N R
Sbjct: 713 WMLNRTAEVIDEVTTAFEQFEFFRFFQTLQNFCVVDLSNFYLDIAKDRLYVSAANDSRRR 772
Query: 985 SGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
S LH + + +AP++ H+AE+++ LP
Sbjct: 773 SCQTVLHLLLECIASLIAPVLCHMAEDIWQSLP 805
Score = 316 bits (810), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 244/405 (60%), Gaps = 27/405 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N +F+LHDGPPYANG H+GH +NK+LKDI + LL+G++V +VPGWDCHGLPIELK
Sbjct: 50 NSGEKFVLHDGPPYANGDLHMGHVLNKVLKDIINKYQLLRGRKVCFVPGWDCHGLPIELK 109
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + ++L+P+ +RKKAK +A + I QKA F WGV +W+ Y TF+K+Y
Sbjct: 110 VLQSLESKERQILTPIALRKKAKEYAKKQIKIQKAGFIRWGVWGEWD-KPYLTFNKDYEA 168
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F N+ +IYR LKPV+WSPSSRTALAE+ELEY DH+S S+Y+ + ++ +
Sbjct: 169 QQIGVFGNMVLAGHIYRGLKPVHWSPSSRTALAEAELEYPDDHISPSVYVSFPIIELTEN 228
Query: 192 LLEGATD---------------LHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGANV 235
L + +IWTTTPW+LPAN I+ + +LEY V + ++
Sbjct: 229 LCQELKKQGLALNRIDQNLKRYFDVVIWTTTPWTLPANLGISVSASLEYCVVVDEQNRHL 288
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
I+AK LV++L ++ G L+ + Y +P+ ++ + +L ++++ GTG
Sbjct: 289 IIAKVLVDNLSTILDRSFKIKATIKGFELEGLIYRNPL-IDRTNTVILGGDYITTETGTG 347
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKD---QVLHL 352
LVH AP HG DDF + +P+L + G + +AG GLN+L D Q LH+
Sbjct: 348 LVHTAPGHGVDDFNTGHSYNLPILCPVDQAGTLTSEAG-AFSGLNVLKDANTSIIQALHI 406
Query: 353 VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
D++ E+Y H YPYDWRTKKP I + ++QWF E + +AL
Sbjct: 407 TN-DLIKKEDYNHRYPYDWRTKKPTIFRTTEQWFASLEGFRKKAL 450
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKD---QVLHLVEPDVLWTENYQ 1151
F H NL + G + +AG GLN+L + Q LH+ D++ E+Y
Sbjct: 360 FNTGHSYNLPILCPVDQAGTLTSEAG-AFSGLNVLKDANTSIIQALHITN-DLIKKEDYN 417
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
H YPYDWRTKKP I + ++QWF E + +AL ++ V ++P+S + + + +R W
Sbjct: 418 HRYPYDWRTKKPTIFRTTEQWFASLEGFRKKALEAIQEVVWIPDSGRNRIESMVKERGDW 477
Query: 1212 CISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
CISRQR WGVPIPVFY+ T +++NE + H LI EHG D WW LL
Sbjct: 478 CISRQRTWGVPIPVFYEKSTGEVLLNEVTLNHIQKLIAEHGSDVWWEFEEIDLL 531
>gi|242063240|ref|XP_002452909.1| hypothetical protein SORBIDRAFT_04g034870 [Sorghum bicolor]
gi|241932740|gb|EES05885.1| hypothetical protein SORBIDRAFT_04g034870 [Sorghum bicolor]
Length = 839
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/642 (36%), Positives = 340/642 (52%), Gaps = 66/642 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ--VPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY +HIS+SIY K+ L E ++ IWTTTPW++PAN +A
Sbjct: 206 TALAEAELEYSENHISRSIYAAFKITNPSKSGMLDEFLPNVSLAIWTTTPWTIPANAAVA 265
Query: 476 FNPALEYSVASVKGAN-------------------------VIVAKCLVENLKWTFQTDI 510
NP L Y+VA V+ VIVA LV L+ + +
Sbjct: 266 VNPELTYAVAEVQSVFESESTSGGKQRKVGNILSSEKGKLFVIVASDLVTTLESKWGVKL 325
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 570
V FPG L+ Y HP+N + +L ++++ GTGLVH AP HGQ+D++ L
Sbjct: 326 AVHKSFPGSALEHCRYAHPVNGNEC-FVVLGGDYITTESGTGLVHTAPGHGQEDYITGLK 384
Query: 571 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDW 628
+P+++ + ++G ++ +AG GL++LG G V+ ++ ++ E Y+H YPYDW
Sbjct: 385 YGLPIISPVDDEGNFTAEAG-RFSGLSVLGAGNTAVVKYLDEQYSLILEEPYKHKYPYDW 443
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
R+K+P I +A++QWF + + A+ + V +VP A+ + + R WCISRQR
Sbjct: 444 RSKEPTIFRATEQWFASVDDFRNAAMDAIRRVTWVPSQAQNRILAMTSSRSDWCISRQRT 503
Query: 689 WGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTK 744
WGVPIPVFY D ++ E I+H ++ + G D WW ++ E+LL D S K
Sbjct: 504 WGVPIPVFYHVDSQEPLITEETIEHIKAIVLKKGSDAWWYMTTEELLPDRYRDKASEYRK 563
Query: 745 SNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFR 799
D +D+WFDSG SW+ VL + PA +Y+EG DQ GWF SSLLTS+A AP+
Sbjct: 564 GTDTMDVWFDSGSSWAAVLAKRGGLNFPADIYLEGSDQHRGWFQSSLLTSIATTGKAPYS 623
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+V HGFV+DEKG KMSKSVGNV+ I G K ++ P
Sbjct: 624 SVITHGFVLDEKGFKMSKSVGNVVDPEKIIVGGKN--------------------QREEP 663
Query: 860 AYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLH----NHSEST 915
YG DVLR WV++ V IG IL D +K+R ++R+LL LH ++S
Sbjct: 664 GYGADVLRLWVSS-VDYSTDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPDNSVPY 722
Query: 916 GSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYC 975
+ + +D Y L +L +M Y +Q+ + ++L F LS FY + KDRLY
Sbjct: 723 NDLPK-IDKYALFQLETVMASMKDSYESYQFYKVYQMLQRFATVGLSNFYLDVAKDRLYV 781
Query: 976 DSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
R S L L+R ++PIMPHLAE+V+ +LP
Sbjct: 782 GGRVSFTRKSCQTVLMAHLLYLVRAISPIMPHLAEDVWQNLP 823
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 244/415 (58%), Gaps = 36/415 (8%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F+LHDGPPYANG H+GHA+NKILKD R LLQ +V +VPGWDCHGLPIELK
Sbjct: 58 NTGPAFVLHDGPPYANGDLHMGHALNKILKDFINRYKLLQNHKVSFVPGWDCHGLPIELK 117
Query: 76 AITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S DK L+P+ +R+KA FA T++ Q F+ +GV ADW+ N Y T EY
Sbjct: 118 VLKSMDKETLSALTPIKLRQKAAKFAKATVDAQMKSFKRYGVWADWD-NPYLTLSPEYEA 176
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ--VP 189
QL F + + YIYR KPV+WSPSSRTALAE+ELEY +H+S+SIY K+
Sbjct: 177 AQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAEAELEYSENHISRSIYAAFKITNPSKS 236
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA---------------- 233
L E ++ IWTTTPW++PAN +A NP L Y+VA V+
Sbjct: 237 GMLDEFLPNVSLAIWTTTPWTIPANAAVAVNPELTYAVAEVQSVFESESTSGGKQRKVGN 296
Query: 234 ---------NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
VIVA LV +L+ + + V FPG L+ Y HP+N + +L
Sbjct: 297 ILSSEKGKLFVIVASDLVTTLESKWGVKLAVHKSFPGSALEHCRYAHPVNGNEC-FVVLG 355
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGD 344
++++ GTGLVH AP HGQ+D++ L +P+++ + ++G ++ +AG GL++LG
Sbjct: 356 GDYITTESGTGLVHTAPGHGQEDYITGLKYGLPIISPVDDEGNFTAEAG-RFSGLSVLGA 414
Query: 345 GKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
G V+ ++ ++ E Y+H YPYDWR+K+P I +A++QWF + + A+
Sbjct: 415 GNTAVVKYLDEQYSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDDFRNAAM 469
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +AG GL++LG G V+ ++ ++ E Y+H YPYDWR+K+P I
Sbjct: 393 VDDEGNFTAEAG-RFSGLSVLGAGNTAVVKYLDEQYSLILEEPYKHKYPYDWRSKEPTIF 451
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + A+ + V +VP A+ + + R WCISRQR WGVPIPVF
Sbjct: 452 RATEQWFASVDDFRNAAMDAIRRVTWVPSQAQNRILAMTSSRSDWCISRQRTWGVPIPVF 511
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D ++ E I+H ++ + G D WW + E+LL
Sbjct: 512 YHVDSQEPLITEETIEHIKAIVLKKGSDAWWYMTTEELL 550
>gi|88807987|ref|ZP_01123498.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
gi|88788026|gb|EAR19182.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
Length = 968
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/631 (37%), Positives = 340/631 (53%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEG------------ATDLHALIWT 462
TALAE+ELEY H S S+Y+ + ++P L L+G L IWT
Sbjct: 204 TALAEAELEYPDGHTSPSVYVAFPVEELPKALRDTLKGDGIDLPTEAAPLGDALQVAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y+ V +G ++VA L+E+L T + + G L
Sbjct: 264 TTPWTLPANLAVSVNERLDYALVDDGEGRMLVVAADLIESLSKTLERPLKRRATVKGAQL 323
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+TY HP+ ++ ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 324 AGLTYRHPL-LDRTSAVVIGGEYITTESGTGLVHTAPGHGVDDFHTGQKYGLPVLCPVDE 382
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AGP +GLN+L D ++ +E +L E Y H YPYDWRTKKP I +A+
Sbjct: 383 AGTLTAEAGP-FKGLNVLKDANPVIIEALEQAGALLKQEAYGHRYPYDWRTKKPTIFRAT 441
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF E + +AL ++ V + P S + + + +R WCISRQR WGVPIPVFY
Sbjct: 442 EQWFASVEGFRQQALEAIDHVQWTPASGRNRIEAMVKERGDWCISRQRTWGVPIPVFYHR 501
Query: 698 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDS 755
+++N + H TLI HG D WW + LL +D K D +D+WFDS
Sbjct: 502 SNGEVLLNADTLAHIETLIAAHGGDVWWEKAEVDLLPPAYADQADQWRKGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE
Sbjct: 562 GSSWAAVSSQREALSYPADLYLEGSDQHRGWFQSSLLTSVAVNGKAPYKRVLTHGFALDE 621
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I +G K K+ P +G DVLR WV
Sbjct: 622 KGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPPFGADVLRLWV 661
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ S +I+ +D +M
Sbjct: 662 SS-VDYSADVPIGAGILRQIADVYRKVRNTSRYLLGNLHDFSPERDAIAVADLPLLDRWM 720
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E + + + +++ R ++L NF V +LS FY + KDRLY + + + R S
Sbjct: 721 LQRTAEVMDEITESFENYEFFRFFQLLQNFCVTDLSNFYLDIAKDRLYVSAPSDQRRRSC 780
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ +LP
Sbjct: 781 QTVMALIIERLAGLIAPVLCHMAEDIWQNLP 811
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 241/404 (59%), Gaps = 25/404 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKD+ + +LQG+RV YVPGWDCHGLPIELK
Sbjct: 56 NSGPPFTLHDGPPYANGALHMGHALNKVLKDVINKYQVLQGRRVRYVPGWDCHGLPIELK 115
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D + L+P+ +RKKA +A + ++ Q F+ WG+ ADWE Y T KEY
Sbjct: 116 VLQSMDPEQRQALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQP-YLTLQKEYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y+ + ++P
Sbjct: 175 AQIKVFGEMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPVEELPKA 234
Query: 192 L---LEG------------ATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGANV 235
L L+G L IWTTTPW+LPAN ++ N L+Y+ V +G +
Sbjct: 235 LRDTLKGDGIDLPTEAAPLGDALQVAIWTTTPWTLPANLAVSVNERLDYALVDDGEGRML 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+VA L+ESL T + ++ G L +TY HP+ ++ ++ ++++ GTG
Sbjct: 295 VVAADLIESLSKTLERPLKRRATVKGAQLAGLTYRHPL-LDRTSAVVIGGEYITTESGTG 353
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG DDF +PVL + G + +AGP +GLN+L D ++ +E
Sbjct: 354 LVHTAPGHGVDDFHTGQKYGLPVLCPVDEAGTLTAEAGP-FKGLNVLKDANPVIIEALEQ 412
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E Y H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 413 AGALLKQEAYGHRYPYDWRTKKPTIFRATEQWFASVEGFRQQAL 456
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 5/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP +GLN+L + ++ +E +L E Y H YPYDWRTKKP I
Sbjct: 380 VDEAGTLTAEAGP-FKGLNVLKDANPVIIEALEQAGALLKQEAYGHRYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL ++ V + P S + + + +R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASVEGFRQQALEAIDHVQWTPASGRNRIEAMVKERGDWCISRQRTWGVPIPVF 498
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWW 1255
Y +++N + H TLI HG D WW
Sbjct: 499 YHRSNGEVLLNADTLAHIETLIAAHGGDVWW 529
>gi|302754402|ref|XP_002960625.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
gi|300171564|gb|EFJ38164.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
Length = 1707
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 247/662 (37%), Positives = 346/662 (52%), Gaps = 87/662 (13%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEY H S+S+Y K+ ++ P L + L IWTTTPW++P N
Sbjct: 337 GTALAEAELEYPEGHTSRSMYAVFKMTFASDKFPKELEYLLSSLGVAIWTTTPWTIPGNT 396
Query: 473 FIAFNPALEYSVASVKGAN----------------------------VIVAKCLVENL-- 502
+A N L YSV V N +IVA LV +L
Sbjct: 397 GVAVNDKLMYSVVEVVFNNDDSSLGGKKSTKAGRKYGNGLLKPVVSHLIVAADLVSSLED 456
Query: 503 KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHG 561
KW Q + C G L+ Y HP+ E R+ ++ G ++++ GTGLVH AP HG
Sbjct: 457 KWNVQLVVKGSCT--GSALEFCRYKHPL--ENREGVIVIGGDYITTDSGTGLVHTAPGHG 512
Query: 562 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTEN 619
Q+DF+ +P+L+ + + G ++ +A G+++L DG + V+ ++ + +L E
Sbjct: 513 QEDFVTGQKYGLPMLSPVDDNGNFTDEANE-FAGMSVLSDGNEAVIKALDANSSLLMEEA 571
Query: 620 YQ---------------HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVP 664
Y H YPYDWRTKKP I +A++QWF E P ALA ++ V+++P
Sbjct: 572 YGKNNLQMFPRIDSRIVHKYPYDWRTKKPTIFRATEQWFASVEGFMPLALAAIKNVDWIP 631
Query: 665 ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPD 722
+ + ++ R WCISRQR WGVPIPVFY DT ++NE I H +I + G D
Sbjct: 632 SQGENRITSMVSGRKEWCISRQRAWGVPIPVFYHVDTGEPLLNEQTISHVQAIIAQQGSD 691
Query: 723 FWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--PAHVYMEGMDQI 778
WWSL+ E LL + SN K D +D+WFDSG SW+ VL K PA VY+EG DQ
Sbjct: 692 AWWSLTTEDLLPDTYKAKASNYRKGTDTMDVWFDSGTSWASVLGTKRWPADVYLEGSDQH 751
Query: 779 NGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAY 838
GWF SSLLTSVA K AP+R V HGFV+DEK KMSKS+GNV+ + +G K
Sbjct: 752 RGWFQSSLLTSVATKGVAPYRQVLTHGFVLDEKNVKMSKSLGNVVDPRSVIEGGKN---- 807
Query: 839 EKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIR 898
K+ PAYG DVLR WVA+ V IG IL + D +K+R
Sbjct: 808 ----------------QKEQPAYGADVLRLWVAS-VDYTGDVAIGPQILKQTADVYRKLR 850
Query: 899 SSLRYLLGVLHN---HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLN 955
+LRYLL LH+ E +D Y L +L +++ ++Q+ + + +
Sbjct: 851 GTLRYLLSNLHDWKPELEIEYDDLPGIDKYTLFQLASVMDSLKDSLDKYQFGKFFQSVQR 910
Query: 956 FVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
+ V +LS FY + KDRLY + R S L ++ L R ++P++PHLAE+ + H
Sbjct: 911 YAVLDLSNFYLDISKDRLYVGGTDSFTRRSCQAVLASLLLYLARGISPVVPHLAEDAWQH 970
Query: 1016 LP 1017
LP
Sbjct: 971 LP 972
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/440 (40%), Positives = 242/440 (55%), Gaps = 63/440 (14%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
G+P F LHDGPPYANG H+GHA+NKILKD R LLQG+++ YVPGWDCHGLPIELK
Sbjct: 191 QGEP-FTLHDGPPYANGDLHMGHALNKILKDFINRYQLLQGRKIFYVPGWDCHGLPIELK 249
Query: 76 AITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D LSP+++RKKA FAL+T++ Q++ F+ +GV W ++ Y T Y
Sbjct: 250 VLQSIDAEARMKLSPIELRKKAAEFALKTVDQQRSSFQRYGVWGSW-NSPYLTLQPAYEA 308
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQ 187
Q+ F + YIYR KPV+WSPSS TALAE+ELEY H S+S+Y K+ ++
Sbjct: 309 AQIGVFCQMVLNGYIYRGRKPVHWSPSSGTALAEAELEYPEGHTSRSMYAVFKMTFASDK 368
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------------- 234
P L + L IWTTTPW++P N +A N L YSV V N
Sbjct: 369 FPKELEYLLSSLGVAIWTTTPWTIPGNTGVAVNDKLMYSVVEVVFNNDDSSLGGKKSTKA 428
Query: 235 ---------------VIVAKCLVESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQ 277
+IVA LV SL KW Q ++ C G L+ Y HP+ E
Sbjct: 429 GRKYGNGLLKPVVSHLIVAADLVSSLEDKWNVQLVVKGSCT--GSALEFCRYKHPL--EN 484
Query: 278 RDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 336
R+ ++ G ++++ GTGLVH AP HGQ+DF+ +P+L+ + + G ++ +A
Sbjct: 485 REGVIVIGGDYITTDSGTGLVHTAPGHGQEDFVTGQKYGLPMLSPVDDNGNFTDEANE-F 543
Query: 337 EGLNILGDGKDQVLHLVEPD--VLWTENYQ---------------HSYPYDWRTKKPVIL 379
G+++L DG + V+ ++ + +L E Y H YPYDWRTKKP I
Sbjct: 544 AGMSVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFPRIDSRIVHKYPYDWRTKKPTIF 603
Query: 380 KASQQWFIDTERIKPEALVC 399
+A++QWF E P AL
Sbjct: 604 RATEQWFASVEGFMPLALAA 623
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 98/177 (55%), Gaps = 20/177 (11%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQ------------ 1151
L+ + + G ++ +A G+++L +G + V+ ++ + +L E Y
Sbjct: 527 LSPVDDNGNFTDEANE-FAGMSVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFPRIDS 585
Query: 1152 ---HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQR 1208
H YPYDWRTKKP I +A++QWF E P ALA ++ V+++P + + ++ R
Sbjct: 586 RIVHKYPYDWRTKKPTIFRATEQWFASVEGFMPLALAAIKNVDWIPSQGENRITSMVSGR 645
Query: 1209 PYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WCISRQR WGVPIPVFY DT ++NE I H +I + G D WWSL E LL
Sbjct: 646 KEWCISRQRAWGVPIPVFYHVDTGEPLLNEQTISHVQAIIAQQGSDAWWSLTTEDLL 702
>gi|33864825|ref|NP_896384.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
gi|81575298|sp|Q7U9G9.1|SYI_SYNPX RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|33632348|emb|CAE06804.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
Length = 974
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/631 (37%), Positives = 338/631 (53%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--------LEGATDLHAL-------IWT 462
TALAE+ELEY H S S+Y+ +VP L LE T+ AL IWT
Sbjct: 205 TALAEAELEYPDGHTSPSVYVAFPAMEVPTPLRDALKAEGLELPTETDALRQALQVAIWT 264
Query: 463 TTPWSLPANQFIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y+ V G ++VA L+E+L T + + G L
Sbjct: 265 TTPWTLPANLAVSVNERLDYALVDDGSGRMLVVAADLIESLSTTLERPLKHRATVKGALL 324
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y HP+ + ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 325 AGLIYRHPLLDRTSPV-VIGGEYITTESGTGLVHTAPGHGVDDFHTGQKHGLPVLCPVDE 383
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AGP GLN+L D ++ +E +L E Y H YPYDWRTKKP I +A+
Sbjct: 384 AGTLTAEAGP-FAGLNVLKDANPGIIEALEQAGALLKQEAYSHRYPYDWRTKKPTIFRAT 442
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF E + +AL +++V + P S + + + +R WCISRQR WGVPIPVFY
Sbjct: 443 EQWFASVEGFRQDALDAIDQVQWTPASGRNRIEAMVKERGDWCISRQRTWGVPIPVFYHH 502
Query: 698 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDS 755
+++N + H TLI HG D WW LL + N K D +D+WFDS
Sbjct: 503 SNGEVLLNADTLSHIETLIASHGADVWWEKDETDLLPPAYANQADQWRKGTDTMDVWFDS 562
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE
Sbjct: 563 GSSWAAVSSQRESLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKRVLTHGFALDE 622
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I +G K K+ P YG DVLR WV
Sbjct: 623 KGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPPYGADVLRLWV 662
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ + ++ +I+ +D +M
Sbjct: 663 SS-VDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPASDAIAVADLPLLDRWM 721
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E + + + +++ R ++L NF V +LS FY + KDRLY + + R S
Sbjct: 722 LQRTAEVMHEITEAFESYEFFRFFQLLQNFCVTDLSNFYLDIAKDRLYVSAPTDQRRRSC 781
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ +LP
Sbjct: 782 QTVMALIIERLAGFIAPVLCHMAEDIWQNLP 812
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/404 (43%), Positives = 238/404 (58%), Gaps = 25/404 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKD+ + +L+G+RV YVPGWDCHGLPIELK
Sbjct: 57 NDGPTFTLHDGPPYANGALHMGHALNKVLKDVINKYQVLKGRRVRYVPGWDCHGLPIELK 116
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+P+ +RKKA +A + ++ Q F+ WG+ ADWE Y T KEY
Sbjct: 117 VLQSMDQEQRKALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQP-YLTLQKEYEA 175
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y+ +VP
Sbjct: 176 AQIKVFGEMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAMEVPTP 235
Query: 192 L--------LEGATDLHAL-------IWTTTPWSLPANQFIAFNPALEYS-VASVKGANV 235
L LE T+ AL IWTTTPW+LPAN ++ N L+Y+ V G +
Sbjct: 236 LRDALKAEGLELPTETDALRQALQVAIWTTTPWTLPANLAVSVNERLDYALVDDGSGRML 295
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+VA L+ESL T + ++ G L + Y HP+ + ++ ++++ GTG
Sbjct: 296 VVAADLIESLSTTLERPLKHRATVKGALLAGLIYRHPLLDRTSPV-VIGGEYITTESGTG 354
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG DDF +PVL + G + +AGP GLN+L D ++ +E
Sbjct: 355 LVHTAPGHGVDDFHTGQKHGLPVLCPVDEAGTLTAEAGP-FAGLNVLKDANPGIIEALEQ 413
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E Y H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 414 AGALLKQEAYSHRYPYDWRTKKPTIFRATEQWFASVEGFRQDAL 457
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ +E +L E Y H YPYDWRTKKP I
Sbjct: 381 VDEAGTLTAEAGP-FAGLNVLKDANPGIIEALEQAGALLKQEAYSHRYPYDWRTKKPTIF 439
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL ++ V + P S + + + +R WCISRQR WGVPIPVF
Sbjct: 440 RATEQWFASVEGFRQDALDAIDQVQWTPASGRNRIEAMVKERGDWCISRQRTWGVPIPVF 499
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVN 1269
Y +++N + H TLI HG D WW LL + N
Sbjct: 500 YHHSNGEVLLNADTLSHIETLIASHGADVWWEKDETDLLPPAYAN 544
>gi|157124563|ref|XP_001654107.1| isoleucyl tRNA synthetase [Aedes aegypti]
gi|108873953|gb|EAT38178.1| AAEL009917-PA, partial [Aedes aegypti]
Length = 863
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/524 (43%), Positives = 312/524 (59%), Gaps = 50/524 (9%)
Query: 518 GQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLN 577
G L I Y HPIN E+ L L V S KGTGLVH APAHG DDFL+ L KIPV +
Sbjct: 238 GSELGSIRYRHPINGEE--LPFLSGEHVKSEKGTGLVHTAPAHGPDDFLVFLDRKIPVRS 295
Query: 578 LITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 637
LI G Y+ A L G L DG +L ++ D + +HSYP DWRTKKPV+L+
Sbjct: 296 LIDETGCYNKQAPDFLRGKFALTDGNQLILERLQNDTMACGVIEHSYPIDWRTKKPVMLR 355
Query: 638 ASQQWFIDTERIKPEALACLEEVNFVPESA----KKTLRDQIAQRPYWCISRQRVWGVPI 693
AS QWFI+T+R+K AL +E+++ P S+ KK L Q+ +RPYWCISRQR WGVPI
Sbjct: 356 ASDQWFINTDRLKESALKAVEQIDIYPHSSADVSKKVLCGQLQKRPYWCISRQRAWGVPI 415
Query: 694 PVFYDGDTI--IVNEANIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTK 744
PV Y+ + +V+ I++ C ++++ G DFWWS V +L+ ++ ++ K
Sbjct: 416 PVVYEKSSTKPVVHPDIIENLCEMLEKTGNVDFWWSTDVAELVPQRVLDELQLTHQDLVK 475
Query: 745 SNDILDIWFDSGISWSHVLK-DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFL 803
+DILDIWFDSGISW VL ++ A +Y+EG+DQ GWF SSLLTSVA ++ +P+R +F+
Sbjct: 476 GSDILDIWFDSGISWLSVLGGEQKADLYLEGLDQFTGWFQSSLLTSVAARNESPYRALFV 535
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGV 863
HGF VDEKG KMSKS+GN+I S DI + YG
Sbjct: 536 HGFAVDEKGMKMSKSLGNII-----------------------SPKDIVK------QYGC 566
Query: 864 DVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR--Y 921
D LRWWVAAHA ++ ++P+ +L SS +++QKIR ++YLLG +S +S +
Sbjct: 567 DTLRWWVAAHAIQNVSIPVSHKLLGSSAENLQKIRGIMKYLLGATSEAVDSRIDLSNLTH 626
Query: 922 VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGE 981
VD Y L++LC F +T+ +LY +QY +AS ++ F V+ LS FY LVKDRLYC S
Sbjct: 627 VDQYFLQQLCLFHDTVFSLYDSYQYNKASATIVTFCVSTLSGFYVHLVKDRLYCGSDKQF 686
Query: 982 ARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSS 1025
L + L VL + + PI P L EE +S+ R+ F S
Sbjct: 687 HNLQAI--LAQTLKVLCKVLWPIAPFLVEESWSY-SGREPFFKS 727
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 134/185 (72%), Gaps = 5/185 (2%)
Query: 4 FSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
FSELY+WQRE L + EFILHDGPPYANG H+GHAVNKILKD+ L+ ++ G +VHYVP
Sbjct: 42 FSELYAWQRENLPAEKEFILHDGPPYANGDLHMGHAVNKILKDLILKHKIVSGTKVHYVP 101
Query: 64 GWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW--EHNC 121
GWDCHGLPIELKA+ + K +R+ A+ FAL+TI QK EFE WGV ADW +
Sbjct: 102 GWDCHGLPIELKALEAYGK---KHKVRELARKFALDTIEKQKIEFEQWGVTADWTSRKSW 158
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D Y+ QL F L+ + IYRD+KPVYWSPSS++ALAE+ELEY H S S+YL
Sbjct: 159 YRTLDVGYISAQLKLFQELFAKGLIYRDVKPVYWSPSSQSALAEAELEYDEAHKSPSLYL 218
Query: 182 KIKLN 186
K++L
Sbjct: 219 KMRLT 223
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 102/164 (62%), Gaps = 7/164 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+LI G Y+ A L G L +G +L ++ D + +HSYP DWRTKKPV+L
Sbjct: 295 SLIDETGCYNKQAPDFLRGKFALTDGNQLILERLQNDTMACGVIEHSYPIDWRTKKPVML 354
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPES----AKKSLRDQIAQRPYWCISRQRVWGVP 1222
+AS QWFI+T+R+K AL +E ++ P S +KK L Q+ +RPYWCISRQR WGVP
Sbjct: 355 RASDQWFINTDRLKESALKAVEQIDIYPHSSADVSKKVLCGQLQKRPYWCISRQRAWGVP 414
Query: 1223 IPVFYDGDTI--IVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
IPV Y+ + +V+ I++ C ++++ G DFWWS V +L+
Sbjct: 415 IPVVYEKSSTKPVVHPDIIENLCEMLEKTGNVDFWWSTDVAELV 458
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Query: 261 GQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLN 320
G L I Y HPIN E+ L L V S KGTGLVH APAHG DDFL+ L KIPV +
Sbjct: 238 GSELGSIRYRHPINGEE--LPFLSGEHVKSEKGTGLVHTAPAHGPDDFLVFLDRKIPVRS 295
Query: 321 LITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 380
LI G Y+ A L G L DG +L ++ D + +HSYP DWRTKKPV+L+
Sbjct: 296 LIDETGCYNKQAPDFLRGKFALTDGNQLILERLQNDTMACGVIEHSYPIDWRTKKPVMLR 355
Query: 381 ASQQWFIDTERIKPEAL 397
AS QWFI+T+R+K AL
Sbjct: 356 ASDQWFINTDRLKESAL 372
>gi|282901331|ref|ZP_06309257.1| Isoleucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
CS-505]
gi|281193826|gb|EFA68797.1| Isoleucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
CS-505]
Length = 963
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/640 (37%), Positives = 345/640 (53%), Gaps = 58/640 (9%)
Query: 418 TALAESELEYKPDHISKSIY-----LKI--KLNQVPAHLLEGATDLHALIWTTTPWSLPA 470
TALAE+ELEY H+S+SIY +K+ KL V A + DL +WTTTPW++P
Sbjct: 196 TALAEAELEYPEGHVSRSIYTVFPVIKVSEKLKSVLAPFM---PDLALAVWTTTPWTIPG 252
Query: 471 NQFIAFNPALEYSVASV--------KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQ 522
N IA N +L Y+V V +IVA LV L D+ V F G+ L+
Sbjct: 253 NLAIAVNGSLNYAVVEVLPNETSLFHHKYLIVATDLVPRLTTILNVDLRVQVSFAGEDLE 312
Query: 523 DITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
Y HP+ + + L+ ++++ GTGLVH AP HGQ+D+++ +P+L +
Sbjct: 313 HTIYRHPLFDRESPV-LIGGDYITTDSGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDEN 371
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQ 640
G ++ DAG GLN+LG+G ++ + +L E YQH YPYDWRT KP I +A++
Sbjct: 372 GNFTQDAGK-FAGLNVLGEGNQAIIDALAQAGSLLKEEAYQHKYPYDWRTNKPTIFRATE 430
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 700
QWF + +AL + V ++P + + +A+R WCISRQR WG+PIPVFYD +
Sbjct: 431 QWFASVHGFREDALKAIASVRWIPPQGENRITPMVAERSDWCISRQRAWGLPIPVFYDQE 490
Query: 701 T--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN---VTKSNDILDIWFDS 755
T +++NE I H +I + G D WW L + +LL SN + D +D+WFDS
Sbjct: 491 TGEVLLNEDTINHVQAIIAQRGSDAWWELEIAELL-PEPYRSNGHKYRRGMDTMDVWFDS 549
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE
Sbjct: 550 GSSWAAVANQRQELTYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDE 609
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
+G KMSKS+GNV+ I G K KK PAYG DVLR WV
Sbjct: 610 QGRKMSKSIGNVVDPQIIINGGKD--------------------QKKDPAYGADVLRLWV 649
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYM 926
++ V +G NI+ D KIR++ R+LLG LH+ ++S +D YM
Sbjct: 650 SS-VDYSGDVRLGGNIIKQLADIRNKIRNTARFLLGSLHDFDPEKNAVSLEKLPELDRYM 708
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L R+ E + + + FQ+ R + + NF V +LS FY + KDRLY + + R S
Sbjct: 709 LHRIYEVFSEVTAAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAADSFRRRSC 768
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
LH L+R +AP++ H AE+++ +P + S F
Sbjct: 769 QTILHIALENLVRAIAPVLCHTAEDIWQFIPYSRSEKSVF 808
Score = 328 bits (840), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 242/398 (60%), Gaps = 27/398 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG+ HIGHA+NKILKDI R LLQG++V YV GWDCHGLPIELK + +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLQGRKVRYVAGWDCHGLPIELKVLQAM 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+PL +R+KAK+FAL + Q F+ +G+ +DW+H Y T EY Q+
Sbjct: 113 KSPERQNLTPLQLRQKAKDFALVAVREQLNSFKRYGIWSDWDH-PYLTLQPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY-----LKI--KLNQVP 189
F +Y + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SIY +K+ KL V
Sbjct: 172 FGRMYLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYTVFPVIKVSEKLKSVL 231
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--------KGANVIVAKCL 241
A + DL +WTTTPW++P N IA N +L Y+V V +IVA L
Sbjct: 232 APFM---PDLALAVWTTTPWTIPGNLAIAVNGSLNYAVVEVLPNETSLFHHKYLIVATDL 288
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
V L D+ V F G+ L+ Y HP+ + + L+ ++++ GTGLVH AP
Sbjct: 289 VPRLTTILNVDLRVQVSFAGEDLEHTIYRHPLFDRESPV-LIGGDYITTDSGTGLVHTAP 347
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLW 359
HGQ+D+++ +P+L + G ++ DAG GLN+LG+G ++ + +L
Sbjct: 348 GHGQEDYIVGQRYGLPILAPVDENGNFTQDAGK-FAGLNVLGEGNQAIIDALAQAGSLLK 406
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E YQH YPYDWRT KP I +A++QWF + +AL
Sbjct: 407 EEAYQHKYPYDWRTNKPTIFRATEQWFASVHGFREDAL 444
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 6/175 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ DAG GLN+LGEG ++ + +L E YQH YPYDWRT KP I
Sbjct: 368 VDENGNFTQDAGK-FAGLNVLGEGNQAIIDALAQAGSLLKEEAYQHKYPYDWRTNKPTIF 426
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + +AL + V ++P + + +A+R WCISRQR WG+PIPVF
Sbjct: 427 RATEQWFASVHGFREDALKAIASVRWIPPQGENRITPMVAERSDWCISRQRAWGLPIPVF 486
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSNQGL 1279
YD +T +++NE I H +I + G D WW L + +LL SN K +G+
Sbjct: 487 YDQETGEVLLNEDTINHVQAIIAQRGSDAWWELEIAELL-PEPYRSNGHKYRRGM 540
>gi|282897045|ref|ZP_06305047.1| Isoleucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
gi|281197697|gb|EFA72591.1| Isoleucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
Length = 965
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/640 (37%), Positives = 345/640 (53%), Gaps = 58/640 (9%)
Query: 418 TALAESELEYKPDHISKSIY-----LKI--KLNQVPAHLLEGATDLHALIWTTTPWSLPA 470
TALAE+ELEY H+S+SIY +K+ KL V A + DL +WTTTPW++P
Sbjct: 196 TALAEAELEYPEGHVSRSIYTVFPVIKVSEKLKSVLAPFM---PDLALAVWTTTPWTIPG 252
Query: 471 NQFIAFNPALEYSVASV--------KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQ 522
N IA N +L Y+V V +IV+ LV L D+ V F G+ L+
Sbjct: 253 NLAIAVNGSLNYAVVEVLPNENSLFHHKYLIVSTDLVPRLTTILNVDLRVQASFSGEDLE 312
Query: 523 DITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
Y HP+ + + L+ ++++ GTGLVH AP HGQ+D+++ +P+L +
Sbjct: 313 HTIYRHPLFDRESPV-LIGGDYITTDSGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDEN 371
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQ 640
G ++ DAG GLN+LG+G ++ + +L E YQH YPYDWRT KP I +A++
Sbjct: 372 GNFTQDAGK-FAGLNVLGEGNQAIIDALAQAGSLLKEEAYQHKYPYDWRTNKPTIFRATE 430
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 700
QWF + +AL + V ++P + + +A+R WCISRQR WG+PIPVFYD +
Sbjct: 431 QWFASVHGFREDALKAIASVRWIPPQGENRITPMVAERSDWCISRQRAWGLPIPVFYDQE 490
Query: 701 T--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN---VTKSNDILDIWFDS 755
T +++NE I H +I + G D WW L + +LL SN + D +D+WFDS
Sbjct: 491 TGEVLLNEDTINHVQAIIAQRGSDAWWELEIAELL-PEPYRSNGHQYRRGMDTMDVWFDS 549
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DE
Sbjct: 550 GSSWAAVANQRQELTYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDE 609
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
+G KMSKS+GNV+ I G K KK PAYG DVLR WV
Sbjct: 610 QGRKMSKSIGNVVDPQIIINGGKD--------------------QKKDPAYGADVLRLWV 649
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYM 926
++ V +G NI+ D KIR++ R+LLG LH+ ++S +D YM
Sbjct: 650 SS-VDYSGDVRLGGNIIKQLADIRNKIRNTARFLLGSLHDFDPEKNAVSLEKLPDLDRYM 708
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L R+ E + + + FQ+ R + + NF V +LS FY + KDRLY + + R S
Sbjct: 709 LHRIYEVFSEVTAAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISAADSFRRRSC 768
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
LH L+R +AP++ H AE+++ +P + S F
Sbjct: 769 QTILHIALENLVRAIAPVLCHTAEDIWQFIPYSRSEKSVF 808
Score = 330 bits (847), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 243/398 (61%), Gaps = 27/398 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG+ HIGHA+NKILKDI R LLQG++V YV GWDCHGLPIELK + +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLQGRKVRYVAGWDCHGLPIELKVLQAM 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L+PL +R+KAK+FAL + Q + F+ +G+ +DWEH Y T EY Q+
Sbjct: 113 KSPERQNLTPLQLRQKAKDFALAAVREQLSSFKRYGIWSDWEH-PYLTLQPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY-----LKI--KLNQVP 189
F +Y + YIYR LKPV+WSPSS+TALAE+ELEY HVS+SIY +K+ KL V
Sbjct: 172 FGRMYLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYTVFPVIKVSEKLKSVL 231
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--------KGANVIVAKCL 241
A + DL +WTTTPW++P N IA N +L Y+V V +IV+ L
Sbjct: 232 APFM---PDLALAVWTTTPWTIPGNLAIAVNGSLNYAVVEVLPNENSLFHHKYLIVSTDL 288
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
V L D+ V F G+ L+ Y HP+ + + L+ ++++ GTGLVH AP
Sbjct: 289 VPRLTTILNVDLRVQASFSGEDLEHTIYRHPLFDRESPV-LIGGDYITTDSGTGLVHTAP 347
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLW 359
HGQ+D+++ +P+L + G ++ DAG GLN+LG+G ++ + +L
Sbjct: 348 GHGQEDYIVGQRYGLPILAPVDENGNFTQDAGK-FAGLNVLGEGNQAIIDALAQAGSLLK 406
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E YQH YPYDWRT KP I +A++QWF + +AL
Sbjct: 407 EEAYQHKYPYDWRTNKPTIFRATEQWFASVHGFREDAL 444
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ DAG GLN+LGEG ++ + +L E YQH YPYDWRT KP I
Sbjct: 368 VDENGNFTQDAGK-FAGLNVLGEGNQAIIDALAQAGSLLKEEAYQHKYPYDWRTNKPTIF 426
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + +AL + V ++P + + +A+R WCISRQR WG+PIPVF
Sbjct: 427 RATEQWFASVHGFREDALKAIASVRWIPPQGENRITPMVAERSDWCISRQRAWGLPIPVF 486
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD +T +++NE I H +I + G D WW L + +LL
Sbjct: 487 YDQETGEVLLNEDTINHVQAIIAQRGSDAWWELEIAELL 525
>gi|443310851|ref|ZP_21040490.1| Isoleucyl-tRNA synthetase [Synechocystis sp. PCC 7509]
gi|442779116|gb|ELR89370.1| Isoleucyl-tRNA synthetase [Synechocystis sp. PCC 7509]
Length = 954
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 239/621 (38%), Positives = 334/621 (53%), Gaps = 44/621 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP----AHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S SIY + + + L L IWTTTPW++PAN
Sbjct: 196 TALAEAELEYPEGHTSSSIYAAFAMTSLSESAKSALEPYLPQLSVAIWTTTPWTIPANLA 255
Query: 474 IAFNPALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
++ NP L+Y V + ++ +IVA LV L +T + V G+ L+ TY HP+
Sbjct: 256 VSVNPRLDYVVVEIGSSSKYLIVAADLVGTLSAKLETQLTVKATVKGKDLEHSTYRHPLF 315
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ + L+ +V++ GTGLVH AP HGQ+D+++ +P+L + G ++ +AG
Sbjct: 316 DRESPI-LIGGEYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDENGNFTEEAGK 374
Query: 592 GLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
+ GLN+LG+G V+ + +L E Y H YPYDWRTKKP I +A++QWF
Sbjct: 375 FV-GLNVLGEGNTAVIEALTEAGSLLKMEAYAHKYPYDWRTKKPTIFRATEQWFASVAGF 433
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
+ EAL L V ++P + + ++ R WCISRQR WGVPIPVFYD +T ++NE
Sbjct: 434 REEALKVLASVQWIPPQGENRITPMVSDRADWCISRQRSWGVPIPVFYDEETNEPLMNEE 493
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
I + + E G D WW + +++LL D K D +D+WFDSG SW+ V K
Sbjct: 494 TIAYVQKIFAEKGSDAWWEMPLDELLPEKYRDNGKTYRKGTDTMDVWFDSGSSWAAVAKQ 553
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSLLTSVA APF+ V HGF +DEKG+KMSKS+G
Sbjct: 554 RPELKYPADIYLEGSDQHRGWFQSSLLTSVANNGIAPFKTVLTHGFTLDEKGSKMSKSLG 613
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI + + G K K+ P YG DVLR WV++ V
Sbjct: 614 NVIDPNVVISGGKN--------------------QKEEPPYGADVLRLWVSS-VDYSTDV 652
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNT 936
I KNIL D KIR++ R+LLG LH+ S + +D YML R+ E
Sbjct: 653 SISKNILKQMGDVRSKIRNTARFLLGNLHDFDPSKDVVPYEQLPELDRYMLHRITEVFTD 712
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ + FQ+ R + + NF +LS FY + KDRLY + N R S LH
Sbjct: 713 VTQAFDRFQFFRFFQAVQNFCTIDLSNFYLDIGKDRLYISAENTLRRRSCQTVLHVALEN 772
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
L R +AP++ H AE+++ LP
Sbjct: 773 LTRAIAPVLCHTAEDIWQFLP 793
Score = 325 bits (833), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 239/389 (61%), Gaps = 15/389 (3%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F+LHDGPPYANG HIGHA+NKILKDI R LL+G++ YVPGWDCHGLPIELK + +
Sbjct: 53 FVLHDGPPYANGALHIGHALNKILKDIISRYQLLKGRKARYVPGWDCHGLPIELKVLQNM 112
Query: 80 --KDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++L L+PL++R KA++FAL+ + Q F+ +GV DWEH Y T +Y Q+
Sbjct: 113 KQSERLNLTPLELRHKARDFALKAVGEQSQGFQRFGVWGDWEH-PYLTMTPDYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP----AHL 192
F + + YIYR KPV+WSPSS+TALAE+ELEY H S SIY + + + L
Sbjct: 172 FGQMVLKGYIYRGFKPVHWSPSSKTALAEAELEYPEGHTSSSIYAAFAMTSLSESAKSAL 231
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESLKWTFQ 250
L IWTTTPW++PAN ++ NP L+Y V + ++ +IVA LV +L +
Sbjct: 232 EPYLPQLSVAIWTTTPWTIPANLAVSVNPRLDYVVVEIGSSSKYLIVAADLVGTLSAKLE 291
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
T + V G+ L+ TY HP+ + + L+ +V++ GTGLVH AP HGQ+D+++
Sbjct: 292 TQLTVKATVKGKDLEHSTYRHPLFDRESPI-LIGGEYVTTESGTGLVHTAPGHGQEDYIV 350
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYP 368
+P+L + G ++ +AG + GLN+LG+G V+ + +L E Y H YP
Sbjct: 351 GQRYGLPILAPVDENGNFTEEAGKFV-GLNVLGEGNTAVIEALTEAGSLLKMEAYAHKYP 409
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
YDWRTKKP I +A++QWF + EAL
Sbjct: 410 YDWRTKKPTIFRATEQWFASVAGFREEAL 438
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G ++ +AG + GLN+LGEG V+ + +L E Y H YPYDWRTKKP I
Sbjct: 362 VDENGNFTEEAGKFV-GLNVLGEGNTAVIEALTEAGSLLKMEAYAHKYPYDWRTKKPTIF 420
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + EAL L V ++P + + ++ R WCISRQR WGVPIPVF
Sbjct: 421 RATEQWFASVAGFREEALKVLASVQWIPPQGENRITPMVSDRADWCISRQRSWGVPIPVF 480
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD +T ++NE I + + E G D WW +P+++LL
Sbjct: 481 YDEETNEPLMNEETIAYVQKIFAEKGSDAWWEMPLDELL 519
>gi|302803323|ref|XP_002983415.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
gi|300149100|gb|EFJ15757.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
Length = 1155
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 245/662 (37%), Positives = 346/662 (52%), Gaps = 87/662 (13%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEY H S+S+Y K+ ++ P L + L IWTTTPW++P N
Sbjct: 338 GTALAEAELEYPEGHTSRSMYAVFKMTFTSDKFPKELEYLLSSLGVAIWTTTPWTVPGNT 397
Query: 473 FIAFNPALEYSVASVKGAN----------------------------VIVAKCLVENL-- 502
+A N L YSV V N +IVA LV +L
Sbjct: 398 GVAVNEKLTYSVVEVVLNNDDSSLGGKKSTKAGRKYGNGLLKPVVSHLIVAADLVSSLED 457
Query: 503 KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHG 561
KW Q + C G L+ Y HP+ E R+ ++ G ++++ GTGLVH AP HG
Sbjct: 458 KWNVQLVVKGSC--TGSALEFCRYKHPL--ENREGVIVIGGDYITTDSGTGLVHTAPGHG 513
Query: 562 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTEN 619
Q+DF+ +P+L+ + + G ++ +A G+++L DG + V+ ++ + +L E
Sbjct: 514 QEDFVTGQKYGLPMLSPVDDNGNFTDEANE-FAGMSVLSDGNEAVIKALDANSSLLMEEA 572
Query: 620 YQ---------------HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVP 664
Y H YPYDWRTKKP I +A++QWF E P ALA ++ V+++P
Sbjct: 573 YGKNNLQMFPRIDSRIVHKYPYDWRTKKPTIFRATEQWFASVEGFMPLALAAIKNVDWIP 632
Query: 665 ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPD 722
+ + ++ R WCISRQR WGVPIPVFY DT ++NE I H +I + G D
Sbjct: 633 SQGENRITSMVSGRKEWCISRQRAWGVPIPVFYHVDTGEPLLNEQTISHVQAIIAQQGSD 692
Query: 723 FWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLKDK--PAHVYMEGMDQI 778
WWS++ E LL + SN K D +D+WFDSG SW+ VL K PA VY+EG DQ
Sbjct: 693 AWWSMTTEDLLPDTYKAKASNYRKGTDTMDVWFDSGTSWASVLGTKRWPADVYLEGSDQH 752
Query: 779 NGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAY 838
GWF SSLLTSVA + AP+R V HGFV+DEK KMSKS+GNV+ + +G K
Sbjct: 753 RGWFQSSLLTSVATRGVAPYRQVLTHGFVLDEKNVKMSKSLGNVVDPRSVIEGGKN---- 808
Query: 839 EKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIR 898
K+ PAYG DVLR WVA+ V IG IL + D +K+R
Sbjct: 809 ----------------QKEQPAYGADVLRLWVAS-VDYTGDVAIGPQILKQTADVYRKLR 851
Query: 899 SSLRYLLGVLHN---HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLN 955
+LRYLL LH+ E +D Y L +L +++ ++Q+ + + +
Sbjct: 852 GTLRYLLSNLHDWKPELEIEYDDLPGIDKYTLFQLASVMDSLKDSLDKYQFGKFFQSVQR 911
Query: 956 FVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
+ V +LS FY + KDRLY + R S L ++ L R ++P++PHLAE+ + H
Sbjct: 912 YAVLDLSNFYLDISKDRLYVGGTDSFTRRSCQTVLASLLLYLARGISPVVPHLAEDAWQH 971
Query: 1016 LP 1017
LP
Sbjct: 972 LP 973
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/440 (40%), Positives = 242/440 (55%), Gaps = 63/440 (14%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
G+P F LHDGPPYANG H+GHA+NKILKD R LLQG+++ YVPGWDCHGLPIELK
Sbjct: 192 QGEP-FTLHDGPPYANGDLHMGHALNKILKDFINRYQLLQGRKIFYVPGWDCHGLPIELK 250
Query: 76 AITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D LSP+++RKKA FAL+T++ Q++ F+ +GV W ++ Y T Y
Sbjct: 251 VLQSIDAEARMKLSPIELRKKAAEFALKTVDQQRSSFQRYGVWGSW-NSPYLTLQPAYEA 309
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQ 187
Q+ F + YIYR KPV+WSPSS TALAE+ELEY H S+S+Y K+ ++
Sbjct: 310 AQIGVFCQMVLNGYIYRGRKPVHWSPSSGTALAEAELEYPEGHTSRSMYAVFKMTFTSDK 369
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------------- 234
P L + L IWTTTPW++P N +A N L YSV V N
Sbjct: 370 FPKELEYLLSSLGVAIWTTTPWTVPGNTGVAVNEKLTYSVVEVVLNNDDSSLGGKKSTKA 429
Query: 235 ---------------VIVAKCLVESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQ 277
+IVA LV SL KW Q ++ C G L+ Y HP+ E
Sbjct: 430 GRKYGNGLLKPVVSHLIVAADLVSSLEDKWNVQLVVKGSC--TGSALEFCRYKHPL--EN 485
Query: 278 RDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 336
R+ ++ G ++++ GTGLVH AP HGQ+DF+ +P+L+ + + G ++ +A
Sbjct: 486 REGVIVIGGDYITTDSGTGLVHTAPGHGQEDFVTGQKYGLPMLSPVDDNGNFTDEANE-F 544
Query: 337 EGLNILGDGKDQVLHLVEPD--VLWTENYQ---------------HSYPYDWRTKKPVIL 379
G+++L DG + V+ ++ + +L E Y H YPYDWRTKKP I
Sbjct: 545 AGMSVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFPRIDSRIVHKYPYDWRTKKPTIF 604
Query: 380 KASQQWFIDTERIKPEALVC 399
+A++QWF E P AL
Sbjct: 605 RATEQWFASVEGFMPLALAA 624
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 20/177 (11%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQ------------ 1151
L+ + + G ++ +A G+++L +G + V+ ++ + +L E Y
Sbjct: 528 LSPVDDNGNFTDEANE-FAGMSVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFPRIDS 586
Query: 1152 ---HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQR 1208
H YPYDWRTKKP I +A++QWF E P ALA ++ V+++P + + ++ R
Sbjct: 587 RIVHKYPYDWRTKKPTIFRATEQWFASVEGFMPLALAAIKNVDWIPSQGENRITSMVSGR 646
Query: 1209 PYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WCISRQR WGVPIPVFY DT ++NE I H +I + G D WWS+ E LL
Sbjct: 647 KEWCISRQRAWGVPIPVFYHVDTGEPLLNEQTISHVQAIIAQQGSDAWWSMTTEDLL 703
>gi|334188274|ref|NP_001190497.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
Length = 1279
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/642 (37%), Positives = 347/642 (54%), Gaps = 66/642 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL--NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY HISKSIY KL + L E +++ +WTTTPW++PAN +A
Sbjct: 477 TALAEAELEYPEGHISKSIYAIFKLVGGAKTSLLDEFIPNIYLAVWTTTPWTMPANAAVA 536
Query: 476 FNPALEYSVASVKGAN-------------------------VIVAKCLVENLKWTFQTDI 510
N L+YSV V+ + VIVA LV L+ + +
Sbjct: 537 VNAKLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKL 596
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLAL 569
+ F G L++ Y HPI + RD ++ G ++++ GTGLVH AP HGQ+D+ L
Sbjct: 597 SISKTFLGSDLENCRYTHPI--DNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGL 654
Query: 570 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV--LWTENYQHSYPYD 627
+P+++ + ++GK++ +AG GL++LG+G V+ ++ ++ + E+Y H YPYD
Sbjct: 655 KYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYD 713
Query: 628 WRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQR 687
WRTKKP I +A++QWF E + + + V +VP A + + R WCISRQR
Sbjct: 714 WRTKKPTIFRATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQR 773
Query: 688 VWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVT 743
WGVPIP FY T ++NE I H ++I + G D WW +SVE LL D ++
Sbjct: 774 TWGVPIPAFYHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLLPEKYRDKAADYE 833
Query: 744 KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPF 798
K D +D+WFDSG SW+ VL + PA VY+EG DQ GWF SSLLTS+A + AP+
Sbjct: 834 KGTDTMDVWFDSGSSWAGVLGKREGLSFPADVYLEGTDQHRGWFQSSLLTSIATQGKAPY 893
Query: 799 RNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL 858
V HGFV+DEKG KMSKS+GNV+ + +G K +K
Sbjct: 894 SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKN--------------------SKDA 933
Query: 859 PAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI 918
PAYG DV+R WV++ V IG IL D +K+R +LRYLLG LH+
Sbjct: 934 PAYGADVMRLWVSS-VDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNAVP 992
Query: 919 SR---YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYC 975
+ +D + L +L + Y +Q+ + +++ F + +LS FYF + KDRLY
Sbjct: 993 YQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRLYT 1052
Query: 976 DSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ R S L +LR +API+PHLAE+V+ +LP
Sbjct: 1053 GGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLP 1094
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/416 (43%), Positives = 248/416 (59%), Gaps = 38/416 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +V YVPGWDCHGLPIELK
Sbjct: 329 NNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYVPGWDCHGLPIELK 388
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+PL +R KA FA T+ TQ F+ +GV ADW +N Y T D EY
Sbjct: 389 VLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFKRFGVWADW-NNPYLTLDPEYEA 447
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL--NQVP 189
Q+ F + + YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY KL
Sbjct: 448 AQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFKLVGGAKT 507
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------------- 234
+ L E +++ +WTTTPW++PAN +A N L+YSV V+ +
Sbjct: 508 SLLDEFIPNIYLAVWTTTPWTMPANAAVAVNAKLQYSVVEVQSFSEDESTVTSNKKKIPG 567
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
VIVA LV +L+ + + + F G L++ Y HPI + RD ++
Sbjct: 568 KVLKNQQKLFVIVATDLVPALEAKWGVKLSISKTFLGSDLENCRYTHPI--DNRDCPVVI 625
Query: 285 AG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG 343
G ++++ GTGLVH AP HGQ+D+ L +P+++ + ++GK++ +AG GL++LG
Sbjct: 626 GGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLG 684
Query: 344 DGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G V+ ++ ++ + E+Y H YPYDWRTKKP I +A++QWF E + +
Sbjct: 685 EGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATEQWFASVEGFRTATM 740
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVIL 1166
+ ++GK++ +AG GL++LGEG V+ ++ ++ + E+Y H YPYDWRTKKP I
Sbjct: 664 VDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIF 722
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + + + V +VP A + + R WCISRQR WGVPIP F
Sbjct: 723 RATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQRTWGVPIPAF 782
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y T ++NE I H ++I + G D WW + VE LL
Sbjct: 783 YHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLL 821
>gi|222422851|dbj|BAH19412.1| AT5G49030 [Arabidopsis thaliana]
Length = 955
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/642 (37%), Positives = 347/642 (54%), Gaps = 66/642 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL--NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY HISKSIY KL + L E +++ +WTTTPW++PAN +A
Sbjct: 291 TALAEAELEYPEGHISKSIYAIFKLVGGAKTSLLDEFIPNIYLAVWTTTPWTMPANAAVA 350
Query: 476 FNPALEYSVASVKGAN-------------------------VIVAKCLVENLKWTFQTDI 510
N L+YSV V+ + VIVA LV L+ + +
Sbjct: 351 VNAKLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKL 410
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLAL 569
+ F G L++ Y HPI + RD ++ G ++++ GTGLVH AP HGQ+D+ L
Sbjct: 411 SISKTFLGSDLENCRYTHPI--DNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGL 468
Query: 570 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV--LWTENYQHSYPYD 627
+P+++ + ++GK++ +AG GL++LG+G V+ ++ ++ + E+Y H YPYD
Sbjct: 469 KYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYD 527
Query: 628 WRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQR 687
WRTKKP I +A++QWF E + + + V +VP A + + R WCISRQR
Sbjct: 528 WRTKKPTIFRATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQR 587
Query: 688 VWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVT 743
WGVPIP FY T ++NE I H ++I + G D WW +SVE LL D ++
Sbjct: 588 TWGVPIPAFYHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLLPEKYRDKAADYE 647
Query: 744 KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPF 798
K D +D+WFDSG SW+ VL + PA VY+EG DQ GWF SSLLTS+A + AP+
Sbjct: 648 KGTDTMDVWFDSGSSWAGVLGKREGLSFPADVYLEGTDQHRGWFQSSLLTSIATQGKAPY 707
Query: 799 RNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL 858
V HGFV+DEKG KMSKS+GNV+ + +G K +K
Sbjct: 708 SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKN--------------------SKDA 747
Query: 859 PAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI 918
PAYG DV+R WV++ V IG IL D +K+R +LRYLLG LH+
Sbjct: 748 PAYGADVMRLWVSS-VDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNAVP 806
Query: 919 SR---YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYC 975
+ +D + L +L + Y +Q+ + +++ F + +LS FYF + KDRLY
Sbjct: 807 YQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRLYT 866
Query: 976 DSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ R S L +LR +API+PHLAE+V+ +LP
Sbjct: 867 GGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLP 908
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/416 (43%), Positives = 247/416 (59%), Gaps = 38/416 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +V YVPGWDCHGLPIELK
Sbjct: 143 NNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYVPGWDCHGLPIELK 202
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+PL +R A FA T+ TQ F+ +GV ADW +N Y T D EY
Sbjct: 203 VLQSLDQEVRKELTPLKLRAMAAKFAKATVKTQMESFKRFGVWADW-NNPYLTLDTEYEA 261
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL--NQVP 189
Q+ F + + YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY KL
Sbjct: 262 AQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFKLVGGAKT 321
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------------- 234
+ L E +++ +WTTTPW++PAN +A N L+YSV V+ +
Sbjct: 322 SLLDEFIPNIYLAVWTTTPWTMPANAAVAVNAKLQYSVVEVQSFSEDESTVTSNKKKIPG 381
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
VIVA LV +L+ + + + F G L++ Y HPI + RD ++
Sbjct: 382 KVLKNQQKLFVIVATDLVPALEAKWGVKLSISKTFLGSDLENCRYTHPI--DNRDCPVVI 439
Query: 285 AG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG 343
G ++++ GTGLVH AP HGQ+D+ L +P+++ + ++GK++ +AG GL++LG
Sbjct: 440 GGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLG 498
Query: 344 DGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G V+ ++ ++ + E+Y H YPYDWRTKKP I +A++QWF E + +
Sbjct: 499 EGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATEQWFASVEGFRTATM 554
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVIL 1166
+ ++GK++ +AG GL++LGEG V+ ++ ++ + E+Y H YPYDWRTKKP I
Sbjct: 478 VDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIF 536
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + + + V +VP A + + R WCISRQR WGVPIP F
Sbjct: 537 RATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQRTWGVPIPAF 596
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y T ++NE I H ++I + G D WW + VE LL
Sbjct: 597 YHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLL 635
>gi|154312483|ref|XP_001555569.1| hypothetical protein BC1G_05844 [Botryotinia fuckeliana B05.10]
Length = 953
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 237/616 (38%), Positives = 344/616 (55%), Gaps = 39/616 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY +HIS S Y+K + + L + +L ALIWTTTPW+LPAN+ I
Sbjct: 201 TALAEAELEYNNEHISTSAYIKFPITNISNELKDIIPNLNNLSALIWTTTPWTLPANRAI 260
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD--IDVVC-DFPGQYLQDITYIHPIN 531
AF+ L YS+ ++I+A + L+ + D +++V + P L+ +TY + +
Sbjct: 261 AFHQDLTYSIVKCDEEHLIIADSRISALQESCFKDKAVEIVQQNIPNSILKTLTYTNQLR 320
Query: 532 KEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS---- 586
+ D + L+ A FVS+ GTGLVHCAP HG DD+ + I + + + G ++
Sbjct: 321 GQNSDAQPLIHADFVSAESGTGLVHCAPGHGMDDYEVCTRLGIEAVAPVNDLGCFTDAAL 380
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
PD L G ++L DG +VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 381 PDDPSALSGKSVLNDGNMEVLKILGDRVLFISKYKHKYPYDWRTKLPVIVRATEQWFADV 440
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVN 705
+K AL L +V+F+P++ K+ L I R WCISRQR WGVPIP YD + T ++
Sbjct: 441 GDVKSVALERLNDVSFIPQTGKQRLESFIKSRSEWCISRQRAWGVPIPALYDENGTALLT 500
Query: 706 EANIKHFCTLIDEHGPDFWWS-LSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+A++ H ++IDE G D WWS + + +N + D +D+WFDSG SWS
Sbjct: 501 DASVAHILSVIDERGIDAWWSDPENDPAWIPAGMNGTYRRGKDTMDVWFDSGTSWSQT-- 558
Query: 765 DKPAHVYMEGMDQINGWFMSSLL--TSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
D+ A VY EG DQ GWF SSLL T+VA APF+ + HGF +D+ G KMSKS+GN
Sbjct: 559 DQRADVYSEGTDQHRGWFQSSLLTHTAVAESSEAPFKTLITHGFTLDQNGKKMSKSIGNT 618
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ I G+ P K G +I+QG G D LR WVA+ V I
Sbjct: 619 IAPSQIMDGSLLPPVKIKKKGG-----NISQG------LGADALRLWVASSDYTKDLV-I 666
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYG 942
G+ +L + + K R + + LLG +H S T +++ +D L +L ++ Y
Sbjct: 667 GQPVLATVNSALLKYRITFKMLLGSMH-QSARTSPLTK-LDKIALVQLQTVMAEVEAAYD 724
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVA 1002
+++ +A + ++ +LSAFY KDRLYC G L IFH LL+ +
Sbjct: 725 SYEFNKAVSAINRWIYTDLSAFYLEASKDRLYCGDGGG--------VLEEIFHGLLKMLT 776
Query: 1003 PIMPHLAEEVYSHLPS 1018
PI P L EEV++HLP+
Sbjct: 777 PITPCLVEEVWNHLPA 792
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/410 (43%), Positives = 252/410 (61%), Gaps = 19/410 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ A + K FILHDGPPYANG H+GHAVNK+LKDI R+ L QG RV +VPGW
Sbjct: 40 DLYKWQSHARSTKKPFILHDGPPYANGPLHVGHAVNKLLKDIICRTKLQQGHRVVWVPGW 99
Query: 66 DCHGLPIELKAITSKDK-------LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
DCHGLPIE+KA+ + + +L + IRK A++ A +T+ F WGV+ADW+
Sbjct: 100 DCHGLPIEIKALEQQREKNKDGGGVLDAIGIRKAARSLASKTVKEHMKGFREWGVMADWD 159
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
+ T DK + QL F + K+ I+R KPVYWSPSSRTALAE+ELEY +H+S S
Sbjct: 160 -KAWKTMDKTFETKQLAVFQEMVKKGLIFRRYKPVYWSPSSRTALAEAELEYNNEHISTS 218
Query: 179 IYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV 235
Y+K + + L + +L ALIWTTTPW+LPAN+ IAF+ L YS+ ++
Sbjct: 219 AYIKFPITNISNELKDIIPNLNNLSALIWTTTPWTLPANRAIAFHQDLTYSIVKCDEEHL 278
Query: 236 IVAKCLVESLKWTFQTD--IEVV-CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSS 291
I+A + +L+ + D +E+V + P L+ +TY + + + D + L+ A FVS+
Sbjct: 279 IIADSRISALQESCFKDKAVEIVQQNIPNSILKTLTYTNQLRGQNSDAQPLIHADFVSAE 338
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS----PDAGPGLEGLNILGDGKD 347
GTGLVHCAP HG DD+ + I + + + G ++ PD L G ++L DG
Sbjct: 339 SGTGLVHCAPGHGMDDYEVCTRLGIEAVAPVNDLGCFTDAALPDDPSALSGKSVLNDGNM 398
Query: 348 QVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D +K AL
Sbjct: 399 EVLKILGDRVLFISKYKHKYPYDWRTKLPVIVRATEQWFADVGDVKSVAL 448
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
Query: 1117 PDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
PD L G ++L +G +VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 381 PDDPSALSGKSVLNDGNMEVLKILGDRVLFISKYKHKYPYDWRTKLPVIVRATEQWFADV 440
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVN 1235
+K AL L V+F+P++ K+ L I R WCISRQR WGVPIP YD + T ++
Sbjct: 441 GDVKSVALERLNDVSFIPQTGKQRLESFIKSRSEWCISRQRAWGVPIPALYDENGTALLT 500
Query: 1236 EANIKHFCTLIDEHGPDFWWSLP 1258
+A++ H ++IDE G D WWS P
Sbjct: 501 DASVAHILSVIDERGIDAWWSDP 523
>gi|33860796|ref|NP_892357.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|81576445|sp|Q7V352.1|SYI_PROMP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|33633738|emb|CAE18697.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 965
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/632 (36%), Positives = 345/632 (54%), Gaps = 58/632 (9%)
Query: 418 TALAESELEYKPDHISKSIY-------------LKIKLNQVPAHLLEGATDLHALIWTTT 464
TALAE+ELEY +H SKSIY LK++ + LL L IWTTT
Sbjct: 204 TALAEAELEYPEEHFSKSIYVSLNITKLSDAVLLKLEEKDLRNKLLSSLNKLFIAIWTTT 263
Query: 465 PWSLPANQFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
PW++P N+ +A NP + Y AS + N+ + A+ L+ + + +V+ D G L+
Sbjct: 264 PWTIPGNEAVAINPRINYVFASDQNGNIYLFARDLISEICEKLDREFNVLLDVKGSLLEG 323
Query: 524 ITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 583
+ Y HP + ++ ++ ++++ GTG+VH AP HG DDF + ++P+ ++ +G
Sbjct: 324 LEYKHPTKNKFCNI-VIGGDYITTESGTGIVHTAPGHGMDDFNVGQKYQLPITCIVDEKG 382
Query: 584 KYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQ 641
+ A GLN+L D D ++ +L ENY+H YPYDWRTKKP I +A++Q
Sbjct: 383 NLNKHA-EKFCGLNVLKDANDLIIEDLEKNNLLLLKENYKHRYPYDWRTKKPTIFRATEQ 441
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DG 699
WF E + AL +E+V ++P++ KK + + R WCISRQR WGVPIPVFY +G
Sbjct: 442 WFASVEGFRSSALKAIEDVEWMPKTGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYEKEG 501
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFD 754
+++N I H +L +E+G D WW ++LL N SD K D +D+WFD
Sbjct: 502 KGVLINTETINHIKSLFEEYGADVWWEWDEKKLLPEKYRNESD---RWEKGLDTMDVWFD 558
Query: 755 SGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVD 809
SG SW+ V + + PA +Y+EG DQ GWF SSLLTSVA+ + P++ V HGF +D
Sbjct: 559 SGSSWAAVCEQREELQYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKTVLTHGFALD 618
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
E G KMSKS+GNV+ + I G K PAYG DVLR W
Sbjct: 619 ENGRKMSKSLGNVVDPNIIINGGP--------------------NQKIQPAYGADVLRLW 658
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVY 925
V++ VPIG NIL D +K+R++ RYLLG +H++ + I +D +
Sbjct: 659 VSS-VDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPALEEIDIDQLPLLDQW 717
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
ML RL E + + Y +++++ ++L +F V +LS FY + KDRLY + R S
Sbjct: 718 MLNRLVEVSDEVTIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYVSAKTQFRRRS 777
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L ++P++ H+AE+++ ++P
Sbjct: 778 CQFVMSRIVENLAVIISPVLCHMAEDIWQNIP 809
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/404 (41%), Positives = 235/404 (58%), Gaps = 23/404 (5%)
Query: 14 ALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE 73
+ N F LHDGPPYANG+ H+GHA+NK+LKDI + LQG +VH++PGWDCHGLPIE
Sbjct: 54 STNSGKNFTLHDGPPYANGSLHMGHALNKVLKDIINKYKTLQGFKVHFIPGWDCHGLPIE 113
Query: 74 LKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
LK + S + + L L +RKKA ++A IN Q F+ WG+ DW+ N Y T K Y
Sbjct: 114 LKVLQSLKSNERRNLDSLGLRKKATDYAKIQINNQLEGFKRWGIWGDWD-NPYLTLKKNY 172
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY--------- 180
Q+ F ++ YIYR LKPV+WSPSSRTALAE+ELEY +H SKSIY
Sbjct: 173 ESAQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPEEHFSKSIYVSLNITKLS 232
Query: 181 ----LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV- 235
LK++ + LL L IWTTTPW++P N+ +A NP + Y AS + N+
Sbjct: 233 DAVLLKLEEKDLRNKLLSSLNKLFIAIWTTTPWTIPGNEAVAINPRINYVFASDQNGNIY 292
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+ A+ L+ + + V+ D G L+ + Y HP + ++ ++ ++++ GTG
Sbjct: 293 LFARDLISEICEKLDREFNVLLDVKGSLLEGLEYKHPTKNKFCNI-VIGGDYITTESGTG 351
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LV 353
+VH AP HG DDF + ++P+ ++ +G + A GLN+L D D ++
Sbjct: 352 IVHTAPGHGMDDFNVGQKYQLPITCIVDEKGNLNKHA-EKFCGLNVLKDANDLIIEDLEK 410
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L ENY+H YPYDWRTKKP I +A++QWF E + AL
Sbjct: 411 NNLLLLKENYKHRYPYDWRTKKPTIFRATEQWFASVEGFRSSAL 454
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 88/143 (61%), Gaps = 4/143 (2%)
Query: 1125 GLNILGEGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 1182
GLN+L + D ++ +L ENY+H YPYDWRTKKP I +A++QWF E +
Sbjct: 393 GLNVLKDANDLIIEDLEKNNLLLLKENYKHRYPYDWRTKKPTIFRATEQWFASVEGFRSS 452
Query: 1183 ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 1240
AL +E V ++P++ KK + + R WCISRQR WGVPIPVFY +G +++N I
Sbjct: 453 ALKAIEDVEWMPKTGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYEKEGKGVLINTETIN 512
Query: 1241 HFCTLIDEHGPDFWWSLPVEQLL 1263
H +L +E+G D WW ++LL
Sbjct: 513 HIKSLFEEYGADVWWEWDEKKLL 535
>gi|347841854|emb|CCD56426.1| similar to isoleucyl-tRNA synthetase [Botryotinia fuckeliana]
Length = 953
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/617 (38%), Positives = 347/617 (56%), Gaps = 41/617 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY +HIS S Y+K + + L + +L ALIWTTTPW+LPAN+ I
Sbjct: 201 TALAEAELEYNNEHISTSAYIKFPITNISNELKDIIPNLNNLSALIWTTTPWTLPANRAI 260
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD--IDVVC-DFPGQYLQDITYIHPIN 531
AF+ L YS+ ++I+A + L+ + D +++V + P L+ +TY + +
Sbjct: 261 AFHQDLTYSIVKCDEEHLIIADSRISALQESCFKDKAVEIVQQNIPNSILKTLTYTNQLR 320
Query: 532 KEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS---- 586
+ D + L+ A FVS+ GTGLVHCAP HG DD+ + I + + + G ++
Sbjct: 321 GQNSDAQPLIHADFVSAESGTGLVHCAPGHGMDDYEVCTRLGIEAVAPVNDLGCFTDAAL 380
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
PD L G ++L DG +VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 381 PDDPSALSGKSVLNDGNMEVLKILGDRVLFISKYKHKYPYDWRTKLPVIVRATEQWFADV 440
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVN 705
+K AL L +V+F+P++ K+ L I R WCISRQR WGVPIP YD + T ++
Sbjct: 441 GDVKSVALERLNDVSFIPQTGKQRLESFIKSRSEWCISRQRAWGVPIPALYDENGTALLT 500
Query: 706 EANIKHFCTLIDEHGPDFWWS-LSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+A++ H ++IDE G D WWS + + +N + D +D+WFDSG SWS
Sbjct: 501 DASVAHILSVIDERGIDAWWSDPENDPAWIPAGMNGTYRRGKDTMDVWFDSGTSWSQT-- 558
Query: 765 DKPAHVYMEGMDQINGWFMSSLL--TSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
D+ A VY EG DQ GWF SSLL T+VA APF+ + HGF +D+ G KMSKS+GN
Sbjct: 559 DQRADVYSEGTDQHRGWFQSSLLTHTAVAESSEAPFKTLITHGFTLDQNGKKMSKSIGNT 618
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA-SKDPTVP 881
I+ I G+ P K G +I+QG G D LR WVA+ +KD +
Sbjct: 619 IAPSQIMDGSLLPPVKIKKKGG-----NISQG------LGADALRLWVASSDYTKD--LI 665
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLY 941
IG+ +L + + K R + + LLG +H S T +++ +D L +L ++ Y
Sbjct: 666 IGQPVLATVNSALLKYRITFKMLLGSMH-QSARTSPLTK-LDKIALVQLQTVMAEVEAAY 723
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
+++ +A + ++ +LSAFY KDRLYC G L IFH LL+ +
Sbjct: 724 DSYEFNKAVSAINRWIYTDLSAFYLEASKDRLYCGDGGG--------VLEEIFHGLLKML 775
Query: 1002 APIMPHLAEEVYSHLPS 1018
PI P L EEV++HLP+
Sbjct: 776 TPITPCLVEEVWNHLPA 792
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/410 (43%), Positives = 252/410 (61%), Gaps = 19/410 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ A + K FILHDGPPYANG H+GHAVNK+LKDI R+ L QG RV +VPGW
Sbjct: 40 DLYKWQSHARSTKKPFILHDGPPYANGPLHVGHAVNKLLKDIICRTKLQQGHRVVWVPGW 99
Query: 66 DCHGLPIELKAITSKDK-------LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
DCHGLPIE+KA+ + + +L + IRK A++ A +T+ F WGV+ADW+
Sbjct: 100 DCHGLPIEIKALEQQREKNKDGGGVLDAIGIRKAARSLASKTVKEHMKGFREWGVMADWD 159
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
+ T DK + QL F + K+ I+R KPVYWSPSSRTALAE+ELEY +H+S S
Sbjct: 160 -KAWKTMDKTFETKQLAVFQEMVKKGLIFRRYKPVYWSPSSRTALAEAELEYNNEHISTS 218
Query: 179 IYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV 235
Y+K + + L + +L ALIWTTTPW+LPAN+ IAF+ L YS+ ++
Sbjct: 219 AYIKFPITNISNELKDIIPNLNNLSALIWTTTPWTLPANRAIAFHQDLTYSIVKCDEEHL 278
Query: 236 IVAKCLVESLKWTFQTD--IEVV-CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSS 291
I+A + +L+ + D +E+V + P L+ +TY + + + D + L+ A FVS+
Sbjct: 279 IIADSRISALQESCFKDKAVEIVQQNIPNSILKTLTYTNQLRGQNSDAQPLIHADFVSAE 338
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS----PDAGPGLEGLNILGDGKD 347
GTGLVHCAP HG DD+ + I + + + G ++ PD L G ++L DG
Sbjct: 339 SGTGLVHCAPGHGMDDYEVCTRLGIEAVAPVNDLGCFTDAALPDDPSALSGKSVLNDGNM 398
Query: 348 QVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D +K AL
Sbjct: 399 EVLKILGDRVLFISKYKHKYPYDWRTKLPVIVRATEQWFADVGDVKSVAL 448
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
Query: 1117 PDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
PD L G ++L +G +VL ++ VL+ Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 381 PDDPSALSGKSVLNDGNMEVLKILGDRVLFISKYKHKYPYDWRTKLPVIVRATEQWFADV 440
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVN 1235
+K AL L V+F+P++ K+ L I R WCISRQR WGVPIP YD + T ++
Sbjct: 441 GDVKSVALERLNDVSFIPQTGKQRLESFIKSRSEWCISRQRAWGVPIPALYDENGTALLT 500
Query: 1236 EANIKHFCTLIDEHGPDFWWSLP 1258
+A++ H ++IDE G D WWS P
Sbjct: 501 DASVAHILSVIDERGIDAWWSDP 523
>gi|79330394|ref|NP_001032042.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
gi|332008380|gb|AED95763.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
Length = 955
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/642 (37%), Positives = 347/642 (54%), Gaps = 66/642 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL--NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY HISKSIY KL + L E +++ +WTTTPW++PAN +A
Sbjct: 291 TALAEAELEYPEGHISKSIYAIFKLVGGAKTSLLDEFIPNIYLAVWTTTPWTMPANAAVA 350
Query: 476 FNPALEYSVASVKGAN-------------------------VIVAKCLVENLKWTFQTDI 510
N L+YSV V+ + VIVA LV L+ + +
Sbjct: 351 VNAKLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKL 410
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLAL 569
+ F G L++ Y HPI + RD ++ G ++++ GTGLVH AP HGQ+D+ L
Sbjct: 411 SISKTFLGSDLENCRYTHPI--DNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGL 468
Query: 570 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV--LWTENYQHSYPYD 627
+P+++ + ++GK++ +AG GL++LG+G V+ ++ ++ + E+Y H YPYD
Sbjct: 469 KYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYD 527
Query: 628 WRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQR 687
WRTKKP I +A++QWF E + + + V +VP A + + R WCISRQR
Sbjct: 528 WRTKKPTIFRATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQR 587
Query: 688 VWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVT 743
WGVPIP FY T ++NE I H ++I + G D WW +SVE LL D ++
Sbjct: 588 TWGVPIPAFYHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLLPEKYRDKAADYE 647
Query: 744 KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPF 798
K D +D+WFDSG SW+ VL + PA VY+EG DQ GWF SSLLTS+A + AP+
Sbjct: 648 KGTDTMDVWFDSGSSWAGVLGKREGLSFPADVYLEGTDQHRGWFQSSLLTSIATQGKAPY 707
Query: 799 RNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL 858
V HGFV+DEKG KMSKS+GNV+ + +G K +K
Sbjct: 708 SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKN--------------------SKDA 747
Query: 859 PAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI 918
PAYG DV+R WV++ V IG IL D +K+R +LRYLLG LH+
Sbjct: 748 PAYGADVMRLWVSS-VDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNAVP 806
Query: 919 SR---YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYC 975
+ +D + L +L + Y +Q+ + +++ F + +LS FYF + KDRLY
Sbjct: 807 YQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRLYT 866
Query: 976 DSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ R S L +LR +API+PHLAE+V+ +LP
Sbjct: 867 GGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLP 908
Score = 302 bits (774), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 180/416 (43%), Positives = 248/416 (59%), Gaps = 38/416 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +V YVPGWDCHGLPIELK
Sbjct: 143 NNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYVPGWDCHGLPIELK 202
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+PL +R KA FA T+ TQ F+ +GV ADW +N Y T D EY
Sbjct: 203 VLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFKRFGVWADW-NNPYLTLDPEYEA 261
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL--NQVP 189
Q+ F + + YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY KL
Sbjct: 262 AQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFKLVGGAKT 321
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------------- 234
+ L E +++ +WTTTPW++PAN +A N L+YSV V+ +
Sbjct: 322 SLLDEFIPNIYLAVWTTTPWTMPANAAVAVNAKLQYSVVEVQSFSEDESTVTSNKKKIPG 381
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
VIVA LV +L+ + + + F G L++ Y HPI + RD ++
Sbjct: 382 KVLKNQQKLFVIVATDLVPALEAKWGVKLSISKTFLGSDLENCRYTHPI--DNRDCPVVI 439
Query: 285 AG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG 343
G ++++ GTGLVH AP HGQ+D+ L +P+++ + ++GK++ +AG GL++LG
Sbjct: 440 GGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLG 498
Query: 344 DGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G V+ ++ ++ + E+Y H YPYDWRTKKP I +A++QWF E + +
Sbjct: 499 EGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATEQWFASVEGFRTATM 554
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVIL 1166
+ ++GK++ +AG GL++LGEG V+ ++ ++ + E+Y H YPYDWRTKKP I
Sbjct: 478 VDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIF 536
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + + + V +VP A + + R WCISRQR WGVPIP F
Sbjct: 537 RATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQRTWGVPIPAF 596
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y T ++NE I H ++I + G D WW + VE LL
Sbjct: 597 YHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLL 635
>gi|78185627|ref|YP_378061.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
gi|78169921|gb|ABB27018.1| Isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
Length = 973
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/631 (37%), Positives = 339/631 (53%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATD--------------LHALIWT 462
TALAE+ELEY H S S+Y ++PA L + TD LH IWT
Sbjct: 204 TALAEAELEYPDGHTSPSVYATFPAVELPAVLRDALQTDGIVLPSQAEELGKTLHVAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYSVAS-VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y++A G ++VA L+E+L T + G L
Sbjct: 264 TTPWTLPANLAVSVNERLDYALADDGSGRLLLVAAELIESLSGTLALPLKRKATVKGALL 323
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y HP+ + ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 324 AGLIYRHPLLDRTSPI-VIGGEYITTESGTGLVHTAPGHGVDDFHTGQKNGLPVLCPVDE 382
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVILKAS 639
G + +AGP GLN+L D ++ L + D L E Y H YPYDWRTKKP I +A+
Sbjct: 383 AGTLTEEAGP-FAGLNVLKDANPAIIEALQQADALLKHEPYGHRYPYDWRTKKPTIFRAT 441
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD- 698
+QWF + + +AL +++VN+ P S + + + +R WCISRQR WGVPIPVFY+
Sbjct: 442 EQWFASIDGFRDDALDAIDKVNWTPASGRNRIESMVKERGDWCISRQRTWGVPIPVFYNR 501
Query: 699 -GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDS 755
+++N + H LI +HG D WW +LL + + K D +D+WFDS
Sbjct: 502 TNGEVLLNADTLAHIQGLIADHGADVWWEKDESELLPAAYASEADQWRKGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE
Sbjct: 562 GSSWAAVASQRDNLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYQRVLTHGFALDE 621
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I G K K+ P YG DVLR WV
Sbjct: 622 KGRKMSKSLGNVVDPMVIIAGGKN--------------------QKQDPPYGADVLRLWV 661
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ + S I + +D +M
Sbjct: 662 SS-VDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPSRDGIPVHELPLLDRWM 720
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E + ++ + F++ R ++L N+ V++LS FY + KDRLY + + R S
Sbjct: 721 LQRSAEVMDDINAAFENFEFYRFFQLLQNYCVSDLSNFYLDIAKDRLYVSAPDDRRRRSC 780
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ +LP
Sbjct: 781 QTVMALIIERLAGLIAPVLCHMAEDIWQNLP 811
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/404 (42%), Positives = 237/404 (58%), Gaps = 25/404 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKDI + +L+G+RV +VPGWDCHGLPIELK
Sbjct: 56 NKGPTFTLHDGPPYANGALHMGHALNKVLKDIVNKHQILKGRRVRFVPGWDCHGLPIELK 115
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D + L+P+ +RKKA +A + + Q F+ WG+ ADW+ Y + K+Y
Sbjct: 116 VLQSMDQEQRQALTPIKLRKKAAAYARKQVEGQMKGFQRWGIWADWDQP-YLSLQKDYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F ++ + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y ++PA
Sbjct: 175 AQIRVFGDMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYATFPAVELPAV 234
Query: 192 LLEG-ATD--------------LHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANV 235
L + TD LH IWTTTPW+LPAN ++ N L+Y++A G +
Sbjct: 235 LRDALQTDGIVLPSQAEELGKTLHVAIWTTTPWTLPANLAVSVNERLDYALADDGSGRLL 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+VA L+ESL T ++ G L + Y HP+ + ++ ++++ GTG
Sbjct: 295 LVAAELIESLSGTLALPLKRKATVKGALLAGLIYRHPLLDRTSPI-VIGGEYITTESGTG 353
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVE 354
LVH AP HG DDF +PVL + G + +AGP GLN+L D ++ L +
Sbjct: 354 LVHTAPGHGVDDFHTGQKNGLPVLCPVDEAGTLTEEAGP-FAGLNVLKDANPAIIEALQQ 412
Query: 355 PDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
D L E Y H YPYDWRTKKP I +A++QWF + + +AL
Sbjct: 413 ADALLKHEPYGHRYPYDWRTKKPTIFRATEQWFASIDGFRDDAL 456
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ L + D L E Y H YPYDWRTKKP I
Sbjct: 380 VDEAGTLTEEAGP-FAGLNVLKDANPAIIEALQQADALLKHEPYGHRYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + +AL ++ VN+ P S + + + +R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASIDGFRDDALDAIDKVNWTPASGRNRIESMVKERGDWCISRQRTWGVPIPVF 498
Query: 1227 YD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y+ +++N + H LI +HG D WW +LL
Sbjct: 499 YNRTNGEVLLNADTLAHIQGLIADHGADVWWEKDESELL 537
>gi|22327660|ref|NP_199714.2| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
gi|19424030|gb|AAL87306.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
gi|23296804|gb|AAN13174.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
gi|332008379|gb|AED95762.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
Length = 1093
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/642 (37%), Positives = 347/642 (54%), Gaps = 66/642 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL--NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY HISKSIY KL + L E +++ +WTTTPW++PAN +A
Sbjct: 291 TALAEAELEYPEGHISKSIYAIFKLVGGAKTSLLDEFIPNIYLAVWTTTPWTMPANAAVA 350
Query: 476 FNPALEYSVASVKGAN-------------------------VIVAKCLVENLKWTFQTDI 510
N L+YSV V+ + VIVA LV L+ + +
Sbjct: 351 VNAKLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKL 410
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLAL 569
+ F G L++ Y HPI+ RD ++ G ++++ GTGLVH AP HGQ+D+ L
Sbjct: 411 SISKTFLGSDLENCRYTHPID--NRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGL 468
Query: 570 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV--LWTENYQHSYPYD 627
+P+++ + ++GK++ +AG GL++LG+G V+ ++ ++ + E+Y H YPYD
Sbjct: 469 KYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYD 527
Query: 628 WRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQR 687
WRTKKP I +A++QWF E + + + V +VP A + + R WCISRQR
Sbjct: 528 WRTKKPTIFRATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQR 587
Query: 688 VWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVT 743
WGVPIP FY T ++NE I H ++I + G D WW +SVE LL D ++
Sbjct: 588 TWGVPIPAFYHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLLPEKYRDKAADYE 647
Query: 744 KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPF 798
K D +D+WFDSG SW+ VL + PA VY+EG DQ GWF SSLLTS+A + AP+
Sbjct: 648 KGTDTMDVWFDSGSSWAGVLGKREGLSFPADVYLEGTDQHRGWFQSSLLTSIATQGKAPY 707
Query: 799 RNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL 858
V HGFV+DEKG KMSKS+GNV+ + +G K +K
Sbjct: 708 SAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKN--------------------SKDA 747
Query: 859 PAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI 918
PAYG DV+R WV++ V IG IL D +K+R +LRYLLG LH+
Sbjct: 748 PAYGADVMRLWVSS-VDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNAVP 806
Query: 919 SR---YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYC 975
+ +D + L +L + Y +Q+ + +++ F + +LS FYF + KDRLY
Sbjct: 807 YQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRLYT 866
Query: 976 DSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ R S L +LR +API+PHLAE+V+ +LP
Sbjct: 867 GGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLP 908
Score = 303 bits (775), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 180/416 (43%), Positives = 248/416 (59%), Gaps = 38/416 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +V YVPGWDCHGLPIELK
Sbjct: 143 NNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYVPGWDCHGLPIELK 202
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+PL +R KA FA T+ TQ F+ +GV ADW +N Y T D EY
Sbjct: 203 VLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFKRFGVWADW-NNPYLTLDPEYEA 261
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL--NQVP 189
Q+ F + + YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY KL
Sbjct: 262 AQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFKLVGGAKT 321
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------------- 234
+ L E +++ +WTTTPW++PAN +A N L+YSV V+ +
Sbjct: 322 SLLDEFIPNIYLAVWTTTPWTMPANAAVAVNAKLQYSVVEVQSFSEDESTVTSNKKKIPG 381
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
VIVA LV +L+ + + + F G L++ Y HPI + RD ++
Sbjct: 382 KVLKNQQKLFVIVATDLVPALEAKWGVKLSISKTFLGSDLENCRYTHPI--DNRDCPVVI 439
Query: 285 AG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG 343
G ++++ GTGLVH AP HGQ+D+ L +P+++ + ++GK++ +AG GL++LG
Sbjct: 440 GGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPLVSPVDDEGKFTEEAGQ-FRGLSVLG 498
Query: 344 DGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G V+ ++ ++ + E+Y H YPYDWRTKKP I +A++QWF E + +
Sbjct: 499 EGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATEQWFASVEGFRTATM 554
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVIL 1166
+ ++GK++ +AG GL++LGEG V+ ++ ++ + E+Y H YPYDWRTKKP I
Sbjct: 478 VDDEGKFTEEAGQ-FRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIF 536
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + + + V +VP A + + R WCISRQR WGVPIP F
Sbjct: 537 RATEQWFASVEGFRTATMDAINNVKWVPHQAVNRISAMTSSRSDWCISRQRTWGVPIPAF 596
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y T ++NE I H ++I + G D WW + VE LL
Sbjct: 597 YHVKTKEPLMNEETINHVKSIISQKGSDAWWYMSVEDLL 635
>gi|330792100|ref|XP_003284128.1| hypothetical protein DICPUDRAFT_75115 [Dictyostelium purpureum]
gi|325085942|gb|EGC39340.1| hypothetical protein DICPUDRAFT_75115 [Dictyostelium purpureum]
Length = 1010
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/641 (36%), Positives = 354/641 (55%), Gaps = 70/641 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL--------------EGATDLHALIWTT 463
+ALAE+E+EY H+SKSI++K + + L E +ALIWTT
Sbjct: 224 SALAEAEIEYNDAHVSKSIFVKFNVEKFSDSLKSTVLSDLSSQYFTEENGRKCYALIWTT 283
Query: 464 TPWSLPANQFIAFNPALEYSV---ASVKGANVIVAKCLVENLKWTFQT-DIDVVCDFPGQ 519
TPW++P+N I+ +P +EY + A+ K + I++K E+LK ++ +V +F G+
Sbjct: 284 TPWTIPSNLAISVHPTMEYIIVTNANKKKDHYIISKERFESLKAILNDPELIIVKEFTGE 343
Query: 520 YLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL-----ALAEKIP 574
L+ HP ++ R ++ V GTGLVH AP HG +DF + P
Sbjct: 344 QLKGTVTRHP--QKDRISPIICGDHVVEGSGTGLVHTAPGHGFEDFQVWNEYNNNEVSGP 401
Query: 575 VLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 632
+L+ + G ++ DAG EGLN+L +G V+ ++ +L+ E Y H YPYDWRTKK
Sbjct: 402 ILSPVDESGCFTADAGKEFEGLNVLIEGNQAVIKDLQDKNALLFIEEYTHKYPYDWRTKK 461
Query: 633 PVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVP 692
P++++ ++QWF + I+ +A+ C+ VN VP S L + +R WCISRQRVWG P
Sbjct: 462 PILIRVTKQWFASLKSIQEKAVDCISNVNMVPASGANRLSSMVGKRNDWCISRQRVWGCP 521
Query: 693 IPVFYD-GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDIL 749
IPVFYD + +++ I+H L +HG D W+ LS ++LL D + T D +
Sbjct: 522 IPVFYDKNNEPVIDSDTIEHLKELFGKHGSDCWFKLSAQELLPPKYRDQHEQYTIGTDTM 581
Query: 750 DIWFDSGISWSHVLKDK--------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNV 801
D+WFDSG SW VL ++ A +Y+EG DQ GWF SSLLTSV ++ TAP++NV
Sbjct: 582 DVWFDSGTSWRGVLVERGVIDKDNGKADIYLEGSDQHRGWFQSSLLTSVFVRDTAPYKNV 641
Query: 802 FLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL--P 859
HGF++DEKG KMSKS+GNVI + +G GA K P
Sbjct: 642 VTHGFLLDEKGFKMSKSLGNVIDQSFVIKG----------------------GANKNQDP 679
Query: 860 AYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI 918
AYG+D+LR W+A+ +KD + IG NIL ++++KIR+S +++LG + + +T S+
Sbjct: 680 AYGIDILRTWIASSDYTKD--ISIGPNILVKILENIKKIRNSFKFMLGSNFDFNPATDSV 737
Query: 919 ----SRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
+D Y L + Q ++ Y FQ+ + +LNF E SAFYF ++K RLY
Sbjct: 738 PYDQMSLIDKYALHKAQALQKSVTNHYDNFQFQKVLSDVLNF-TGETSAFYFEIIKQRLY 796
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
+ N + R S L I V+ + +API H +E++Y +
Sbjct: 797 IEKANSQLRKSSQTALFQIVEVINKALAPITIHTSEDIYKN 837
Score = 317 bits (811), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 253/433 (58%), Gaps = 31/433 (7%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ELY WQ E N E++ HDGPPYANG H+GHA+NK LKDI R +L+G +V+Y+PG
Sbjct: 68 TELYKWQLEN-NNNGEWVFHDGPPYANGPLHLGHALNKTLKDIVNRYKVLRGFKVNYIPG 126
Query: 65 WDCHGLPIELKAITSKDKL--LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WDCHGLPIE K S + L P IR A+ +AL+ I QK F G++ DW+ N Y
Sbjct: 127 WDCHGLPIEQKVFQSFETTQGLKPHTIRDAARKYALKEIERQKKGFLELGIMGDWK-NPY 185
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D +Y Q+ FY +Y++ IYR KPVYWSPSSR+ALAE+E+EY HVSKSI++K
Sbjct: 186 RTMDPQYEVQQIQTFYEMYQKGNIYRGEKPVYWSPSSRSALAEAEIEYNDAHVSKSIFVK 245
Query: 183 IKLNQVPAHLL--------------EGATDLHALIWTTTPWSLPANQFIAFNPALEYSV- 227
+ + L E +ALIWTTTPW++P+N I+ +P +EY +
Sbjct: 246 FNVEKFSDSLKSTVLSDLSSQYFTEENGRKCYALIWTTTPWTIPSNLAISVHPTMEYIIV 305
Query: 228 --ASVKGANVIVAKCLVESLKWTFQT-DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
A+ K + I++K ESLK ++ +V +F G+ L+ HP ++ R ++
Sbjct: 306 TNANKKKDHYIISKERFESLKAILNDPELIIVKEFTGEQLKGTVTRHP--QKDRISPIIC 363
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLL-----ALAEKIPVLNLITNQGKYSPDAGPGLEGL 339
V GTGLVH AP HG +DF + P+L+ + G ++ DAG EGL
Sbjct: 364 GDHVVEGSGTGLVHTAPGHGFEDFQVWNEYNNNEVSGPILSPVDESGCFTADAGKEFEGL 423
Query: 340 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N+L +G V+ ++ +L+ E Y H YPYDWRTKKP++++ ++QWF + I+ +A+
Sbjct: 424 NVLIEGNQAVIKDLQDKNALLFIEEYTHKYPYDWRTKKPILIRVTKQWFASLKSIQEKAV 483
Query: 398 VCKTVGNILGRVG 410
C + N++ G
Sbjct: 484 DCISNVNMVPASG 496
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ DAG EGLN+L EG V+ ++ +L+ E Y H YPYDWRTKKP
Sbjct: 403 LSPVDESGCFTADAGKEFEGLNVLIEGNQAVIKDLQDKNALLFIEEYTHKYPYDWRTKKP 462
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
++++ ++QWF + I+ +A+ C+ VN VP S L + +R WCISRQRVWG PI
Sbjct: 463 ILIRVTKQWFASLKSIQEKAVDCISNVNMVPASGANRLSSMVGKRNDWCISRQRVWGCPI 522
Query: 1224 PVFYD-GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFYD + +++ I+H L +HG D W+ L ++LL
Sbjct: 523 PVFYDKNNEPVIDSDTIEHLKELFGKHGSDCWFKLSAQELL 563
>gi|443316714|ref|ZP_21046148.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
gi|442783681|gb|ELR93587.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
Length = 986
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/630 (36%), Positives = 330/630 (52%), Gaps = 52/630 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S SIY L + A +L IWTTTPW++PAN
Sbjct: 214 TALAEAELEYPEGHTSPSIYAAFPLVEASAAAKATLAPYGENLGVAIWTTTPWTIPANLA 273
Query: 474 IAFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
+A N L Y+V +V +++AK L + L T++ + + G L+ TY HP
Sbjct: 274 VAVNGDLTYAVVAVASGKPFPYLLIAKDLCDRLSQVLGTELTLKAELKGSDLEGCTYRHP 333
Query: 530 INKEQRDLK-------LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
+ + K ++ ++++ GTGLVH AP HGQ+DF + + VL + +
Sbjct: 334 LQDQLPTDKRGETSPVIVGGDYITTESGTGLVHTAPGHGQEDFQVGQRYGLSVLCPVDER 393
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQ 640
G + +AGP GLN+L D V+ ++ +L E Y H YPYDWRTKKP I +A++
Sbjct: 394 GDMTAEAGP-FAGLNVLKDANPAVIEALQTAGSLLKQEPYVHKYPYDWRTKKPTIFRATE 452
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 700
QWF + EA+A + V ++P + + + R WCISRQR WGVPIPVFYD +
Sbjct: 453 QWFASVAGFRDEAMAAIRSVQWIPAQGENRITAMVGDRSDWCISRQRTWGVPIPVFYDEE 512
Query: 701 T--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSG 756
T ++N + + L E G D WW LS +LL + D K D +D+WFDSG
Sbjct: 513 TGEPLINPDTLDYIQALFGEKGSDAWWELSESELLPPAYRDNGRTYRKGTDTMDVWFDSG 572
Query: 757 ISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
SW+ V + + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE+
Sbjct: 573 SSWAAVAQQRDALHYPVEMYLEGSDQHRGWFQSSLLTSVAVHGHAPYKTVLTHGFTLDEQ 632
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA 871
G KMSKS+GNV+ + G K K+ P YG DVLR W A
Sbjct: 633 GRKMSKSIGNVVDPQIVIDGGKN--------------------QKQDPPYGADVLRLW-A 671
Query: 872 AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYML 927
+ VP+G NIL D +KIR++ R+LLG LH+ + +++ +D YML
Sbjct: 672 SSVDYSSDVPLGSNILKQMADVYRKIRNTARFLLGNLHDFDPAQNAVAYGDLPELDRYML 731
Query: 928 KRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGL 987
R+ E + + +Q+ R + + NF V +LS FY KDRLY + R S
Sbjct: 732 HRMTEVFAEVKDAFDTYQFFRFFQTIQNFCVVDLSNFYLDTAKDRLYISGADSPRRRSCQ 791
Query: 988 HTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L L R VAP++ H+AE+++ +LP
Sbjct: 792 TVLAIAIENLARAVAPVLSHMAEDIWQNLP 821
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 242/415 (58%), Gaps = 24/415 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y ++ G P F+LHDGPPYANG HIGHA+NKILKDI + +LQG++V Y+PGW
Sbjct: 57 QIYETLAQSNPGAP-FVLHDGPPYANGDLHIGHALNKILKDIVNKYQILQGRKVRYIPGW 115
Query: 66 DCHGLPIELKAITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
DCHGLPIELK + + D L+P+ +RKKAK FAL+TI Q+A F+ +GV DW+
Sbjct: 116 DCHGLPIELKVLQAMDSDTRANLTPIKLRKKAKAFALKTIERQRAGFKRYGVWGDWD-TP 174
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY Q+ F +Y + YIYR LK V+WSP+S+TALAE+ELEY H S SIY
Sbjct: 175 YMTLQPEYEAAQIGVFGQMYLKGYIYRGLKSVHWSPTSQTALAEAELEYPEGHTSPSIYA 234
Query: 182 KIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--- 234
L + A +L IWTTTPW++PAN +A N L Y+V +V
Sbjct: 235 AFPLVEASAAAKATLAPYGENLGVAIWTTTPWTIPANLAVAVNGDLTYAVVAVASGKPFP 294
Query: 235 -VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK-------LLPAG 286
+++AK L + L T++ + + G L+ TY HP+ + K ++
Sbjct: 295 YLLIAKDLCDRLSQVLGTELTLKAELKGSDLEGCTYRHPLQDQLPTDKRGETSPVIVGGD 354
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGK 346
++++ GTGLVH AP HGQ+DF + + VL + +G + +AGP GLN+L D
Sbjct: 355 YITTESGTGLVHTAPGHGQEDFQVGQRYGLSVLCPVDERGDMTAEAGP-FAGLNVLKDAN 413
Query: 347 DQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
V+ ++ +L E Y H YPYDWRTKKP I +A++QWF + EA+
Sbjct: 414 PAVIEALQTAGSLLKQEPYVHKYPYDWRTKKPTIFRATEQWFASVAGFRDEAMAA 468
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ +G + +AGP GLN+L + V+ ++ +L E Y H YPYDWRTKKP I
Sbjct: 390 VDERGDMTAEAGP-FAGLNVLKDANPAVIEALQTAGSLLKQEPYVHKYPYDWRTKKPTIF 448
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + EA+A + V ++P + + + R WCISRQR WGVPIPVF
Sbjct: 449 RATEQWFASVAGFRDEAMAAIRSVQWIPAQGENRITAMVGDRSDWCISRQRTWGVPIPVF 508
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD +T ++N + + L E G D WW L +LL
Sbjct: 509 YDEETGEPLINPDTLDYIQALFGEKGSDAWWELSESELL 547
>gi|297795625|ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
lyrata]
gi|297311532|gb|EFH41956.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
lyrata]
Length = 1095
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 240/642 (37%), Positives = 348/642 (54%), Gaps = 66/642 (10%)
Query: 418 TALAESELEYKPDHISKSIY--LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY HISKSIY K+ + L E ++ +WTTTPW++PAN +A
Sbjct: 291 TALAEAELEYPEGHISKSIYAIFKVVGGAKTSLLDEFVPNICLAVWTTTPWTMPANAAVA 350
Query: 476 FNPALEYSVASVKGAN-------------------------VIVAKCLVENLKWTFQTDI 510
N L+YSV V+ + VIVA LV L+ + +
Sbjct: 351 VNAKLQYSVVEVQSFSEDESAVTGNKKKMPGKVLKNQQKLFVIVATDLVPALEAKWGVKL 410
Query: 511 DVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLAL 569
+ F G L++ Y HPI + RD ++ G ++++ GTGLVH AP HGQ+D+ L
Sbjct: 411 IISKTFLGSDLENCRYTHPI--DNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGL 468
Query: 570 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV--LWTENYQHSYPYD 627
+P+++ + ++GK++ +AG GL++LG+G V+ ++ ++ + E+Y H YPYD
Sbjct: 469 KYGLPLISPVDDEGKFTEEAGR-FRGLSVLGEGNSAVVSYLDENMSLVMEESYAHKYPYD 527
Query: 628 WRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQR 687
WRTKKP I +A++QWF E + + + V +VP+ A + + R WCISRQR
Sbjct: 528 WRTKKPTIFRATEQWFASVEGFRTATMDAINNVKWVPDQAVNRISAMTSSRSDWCISRQR 587
Query: 688 VWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVT 743
WGVPIP FY T ++NE I H ++I + G D WW +SVE LL D ++
Sbjct: 588 TWGVPIPAFYHVKTKEPLMNEETINHVKSVISQKGSDAWWYMSVEDLLPEKYRDKAADYE 647
Query: 744 KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPF 798
K D +D+WFDSG SW+ VL + PA VY+EG DQ GWF SSLLTS+A + AP+
Sbjct: 648 KGTDTMDVWFDSGSSWAGVLGKREGLSFPADVYLEGTDQHRGWFQSSLLTSIATQGKAPY 707
Query: 799 RNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL 858
V HGFV+DEKG KMSKS+GNV+ H + +G K +K
Sbjct: 708 SAVITHGFVLDEKGMKMSKSLGNVVDPHLVIEGGKN--------------------SKDA 747
Query: 859 PAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI 918
PAYG DV+R WV++ V IG IL D +K+R +LRYLLG LH+
Sbjct: 748 PAYGADVMRLWVSS-VDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNDVP 806
Query: 919 SRYVDVYMLKRLCEFQNTMDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYC 975
+ + L + +N + + Y +Q+ + +++ F + +LS FYF + KDRLY
Sbjct: 807 YEDLPIIDQHALFQLENVVKNIHECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRLYT 866
Query: 976 DSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ R S L +LR +API+PHLAE+V+ +LP
Sbjct: 867 GGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLP 908
Score = 299 bits (766), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 179/416 (43%), Positives = 247/416 (59%), Gaps = 38/416 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +V YVPGWDCHGLPIELK
Sbjct: 143 NNGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYVPGWDCHGLPIELK 202
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+PL +R KA FA T+ TQ F+ +GV ADW +N Y T D EY
Sbjct: 203 VLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFKRFGVWADW-NNPYLTLDPEYEA 261
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY--LKIKLNQVP 189
Q+ F + + YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY K+
Sbjct: 262 AQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFKVVGGAKT 321
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------------- 234
+ L E ++ +WTTTPW++PAN +A N L+YSV V+ +
Sbjct: 322 SLLDEFVPNICLAVWTTTPWTMPANAAVAVNAKLQYSVVEVQSFSEDESAVTGNKKKMPG 381
Query: 235 ----------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
VIVA LV +L+ + + + F G L++ Y HPI + RD ++
Sbjct: 382 KVLKNQQKLFVIVATDLVPALEAKWGVKLIISKTFLGSDLENCRYTHPI--DNRDCPVVI 439
Query: 285 AG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG 343
G ++++ GTGLVH AP HGQ+D+ L +P+++ + ++GK++ +AG GL++LG
Sbjct: 440 GGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPLISPVDDEGKFTEEAGR-FRGLSVLG 498
Query: 344 DGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G V+ ++ ++ + E+Y H YPYDWRTKKP I +A++QWF E + +
Sbjct: 499 EGNSAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATEQWFASVEGFRTATM 554
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV--LWTENYQHSYPYDWRTKKPVIL 1166
+ ++GK++ +AG GL++LGEG V+ ++ ++ + E+Y H YPYDWRTKKP I
Sbjct: 478 VDDEGKFTEEAGR-FRGLSVLGEGNSAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIF 536
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + + + V +VP+ A + + R WCISRQR WGVPIP F
Sbjct: 537 RATEQWFASVEGFRTATMDAINNVKWVPDQAVNRISAMTSSRSDWCISRQRTWGVPIPAF 596
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y T ++NE I H ++I + G D WW + VE LL
Sbjct: 597 YHVKTKEPLMNEETINHVKSVISQKGSDAWWYMSVEDLL 635
>gi|427716716|ref|YP_007064710.1| isoleucyl-tRNA synthetase [Calothrix sp. PCC 7507]
gi|427349152|gb|AFY31876.1| Isoleucyl-tRNA synthetase [Calothrix sp. PCC 7507]
Length = 976
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 240/653 (36%), Positives = 344/653 (52%), Gaps = 67/653 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL----EGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY + + L E DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFPVTGLSEALKPTLSEYLPDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASV--KGANV-----------------------IVAKCLVENLKWTFQT 508
+A N L Y++ V +G ++ IVA LVE L T
Sbjct: 256 VAVNGELNYAIVEVSRRGGHLRAGVPPVEQSVRHAEARRGFKYLIVAAELVERLSTTLDV 315
Query: 509 DIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 568
++ V F GQ L+ TY H + + + ++ ++++ GTGLVH AP HGQ+D+++
Sbjct: 316 ELTVKTTFQGQDLEHTTYRHSLFDRESPV-VVGGDYITTESGTGLVHTAPGHGQEDYIVG 374
Query: 569 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLWTENYQHSYPY 626
+P+L + + G ++ +AG GLN+LGDG V+ + +L E Y H YPY
Sbjct: 375 QRYGLPILAPVDDNGNFTAEAGE-FAGLNVLGDGNQAVIDALMAAGSLLKEEAYAHKYPY 433
Query: 627 DWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQ 686
DWRTKKP I +A++QWF + AL + V ++P + + +A+R WCISRQ
Sbjct: 434 DWRTKKPTIFRATEQWFASVAGFREAALKAIATVKWIPAQGENRITPMVAERSDWCISRQ 493
Query: 687 RVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT- 743
R WGVPIPVFYD +T +++NE I + +I E G D WW LSV +LL N+ +
Sbjct: 494 RAWGVPIPVFYDEETGEVLLNEETINYVQAIIAEKGSDAWWELSVAELLPEQYRNNGRSY 553
Query: 744 -KSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAP 797
+ D +D+WFDSG SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP
Sbjct: 554 RRGTDTMDVWFDSGSSWAAVTNLRPELHYPAEIYLEGSDQHRGWFQSSLLTSVAVNGIAP 613
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
++ V HGF +DE+G KMSKS GNV+ + I +G K K+
Sbjct: 614 YKTVLTHGFALDEQGRKMSKSEGNVVDPNAIIEGGKN--------------------QKQ 653
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS 917
PAYG DVLR WV++ V IGKNI+ D KIR++ R+LLG L++
Sbjct: 654 EPAYGADVLRLWVSS-VDYSSDVRIGKNIIKQLNDVRGKIRNTARFLLGSLNDFDPEKDK 712
Query: 918 IS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
+ +D YML R+ E + + FQ+ R + + NF V +LS FY + KDRL
Sbjct: 713 VPFEDLPQLDKYMLHRIFEVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDRL 772
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
Y + + R S L L + +AP++ H AE+++ +LP + S F
Sbjct: 773 YISAPDAFRRRSCQTVLQIALENLAKAIAPVLSHTAEDIWQYLPYKTPYKSVF 825
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 245/412 (59%), Gaps = 38/412 (9%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG+ HIGHA+NKILKDI R ++L+G++V Y+PGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYHILRGRKVRYIPGWDCHGLPIELKVLQNM 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+++ + L+PL +R+KAK FAL T++ Q+ F+ +GV DW+ N Y T EY Q+
Sbjct: 113 KSAERQNLTPLQLRQKAKEFALATVDDQRQSFKRYGVWGDWD-NPYLTLKPEYEAAQIGV 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL--- 193
F ++ + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY + + L
Sbjct: 172 FGQMFLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTGLSEALKPTL 231
Query: 194 -EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV--KGAN---------------- 234
E DL IWTTTPW++P N +A N L Y++ V +G +
Sbjct: 232 SEYLPDLGVAIWTTTPWTIPGNLAVAVNGELNYAIVEVSRRGGHLRAGVPPVEQSVRHAE 291
Query: 235 -------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF 287
+IVA LVE L T ++ V F GQ L+ TY H + + + ++ +
Sbjct: 292 ARRGFKYLIVAAELVERLSTTLDVELTVKTTFQGQDLEHTTYRHSLFDRESPV-VVGGDY 350
Query: 288 VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKD 347
+++ GTGLVH AP HGQ+D+++ +P+L + + G ++ +AG GLN+LGDG
Sbjct: 351 ITTESGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGNFTAEAGE-FAGLNVLGDGNQ 409
Query: 348 QVLH--LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ + +L E Y H YPYDWRTKKP I +A++QWF + AL
Sbjct: 410 AVIDALMAAGSLLKEEAYAHKYPYDWRTKKPTIFRATEQWFASVAGFREAAL 461
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AG GLN+LG+G V+ + +L E Y H YPYDWRTKKP I
Sbjct: 385 VDDNGNFTAEAGE-FAGLNVLGDGNQAVIDALMAAGSLLKEEAYAHKYPYDWRTKKPTIF 443
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + AL + V ++P + + +A+R WCISRQR WGVPIPVF
Sbjct: 444 RATEQWFASVAGFREAALKAIATVKWIPAQGENRITPMVAERSDWCISRQRAWGVPIPVF 503
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
YD +T +++NE I + +I E G D WW L V +LL
Sbjct: 504 YDEETGEVLLNEETINYVQAIIAEKGSDAWWELSVAELL 542
>gi|86608501|ref|YP_477263.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557043|gb|ABD02000.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 942
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 347/633 (54%), Gaps = 47/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQV-PAH---LLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY +HIS SIY+ L + PA L L A IWTTTPW++PAN
Sbjct: 192 TALAEAELEYPDNHISPSIYVAFPLQSLSPAAQPVLEPFMPGLRAAIWTTTPWTIPANLA 251
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ FNP L Y+V S + +++A L E L+ +T +++ PG L+ HP+
Sbjct: 252 LCFNPKLTYAVVESPRFGLLLIAADLRERLEKVLETPLEIKATLPGSALEYSQGRHPLF- 310
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ L +L +V++ GTG+VH AP HG+DDF +P+L+ + +QG+++ +AG
Sbjct: 311 DRASLCVL-GDYVTTESGTGIVHTAPGHGEDDFKTGQKYGLPILSPVDDQGRFTAEAGSQ 369
Query: 593 LEGLNILG-----DGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
GL++L G V+ ++ +L E Y H YPYDWRTK+P I +A++QWF
Sbjct: 370 FVGLDVLSKKPETSGNAAVIQALQAAGALLKEEPYNHKYPYDWRTKEPTIFRATEQWFAS 429
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
+ AL ++ V ++P + + +++R WCISRQR WGVPIPVFYD +T +
Sbjct: 430 VAGFRELALQAIKTVKWIPAIGENRITAMVSERSDWCISRQRAWGVPIPVFYDEETGEPL 489
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSH 761
+ + H + + G D WW VE+LL ++ T K D +D+WFDSG SW+
Sbjct: 490 LTAETLDHIKAIFAQEGSDAWWKRPVEELLPEKYRHNGRTYRKGMDTMDVWFDSGSSWAA 549
Query: 762 VLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
V K + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMSK
Sbjct: 550 VAKAQGLGYPVDLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKAVLTHGFVLDEKGQKMSK 609
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI + G K + PAYG DVLR WV++
Sbjct: 610 SLGNVIDPLVLINGGKD--------------------PQTDPAYGADVLRLWVSS-VDYS 648
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
VP+GK IL D +KIR++ R+LL L++ + + ++ +D Y+L RL E
Sbjct: 649 GDVPLGKTILGQMADVYRKIRNTARFLLSNLYDFNPTQDAVPFAALTELDRYILHRLHEV 708
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + + +Q+ R + + NF V +LS FY + KDRLY R L +
Sbjct: 709 GSEIGESFASYQFYRFFQAIQNFCVVDLSNFYLDIAKDRLYISHAQSLRRRQCQTVLSLL 768
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ HLAEE++SHLP + T S F
Sbjct: 769 LENLAKAIAPVLSHLAEEIWSHLPYPKPTRSVF 801
Score = 309 bits (791), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 175/417 (41%), Positives = 248/417 (59%), Gaps = 27/417 (6%)
Query: 10 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
WQ E + N F+LHDGPPYANG H+G +NKILKDI + ++LQG++V YV
Sbjct: 31 WQEEQIYQRLADHNPGDPFVLHDGPPYANGDIHMGTTLNKILKDIVNKYHILQGRKVRYV 90
Query: 63 PGWDCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + S + + L+PL +R+KAK +AL ++ Q+A F+ GV W+
Sbjct: 91 PGWDCHGLPIELKVLQSLTPQERENLTPLQLRQKAKEYALHYVDVQRASFQRLGVWGSWD 150
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY +H+S S
Sbjct: 151 RP-YLTLSPEYEAAQIEVFGQMALKGYIYRGLKPVHWSPSSQTALAEAELEYPDNHISPS 209
Query: 179 IYLKIKLNQV-PAH---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGA 233
IY+ L + PA L L A IWTTTPW++PAN + FNP L Y+V S +
Sbjct: 210 IYVAFPLQSLSPAAQPVLEPFMPGLRAAIWTTTPWTIPANLALCFNPKLTYAVVESPRFG 269
Query: 234 NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
+++A L E L+ +T +E+ PG L+ HP+ ++ L +L +V++ G
Sbjct: 270 LLLIAADLRERLEKVLETPLEIKATLPGSALEYSQGRHPLF-DRASLCVL-GDYVTTESG 327
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG-----DGKDQ 348
TG+VH AP HG+DDF +P+L+ + +QG+++ +AG GL++L G
Sbjct: 328 TGIVHTAPGHGEDDFKTGQKYGLPILSPVDDQGRFTAEAGSQFVGLDVLSKKPETSGNAA 387
Query: 349 VLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV 402
V+ ++ +L E Y H YPYDWRTK+P I +A++QWF + AL KTV
Sbjct: 388 VIQALQAAGALLKEEPYNHKYPYDWRTKEPTIFRATEQWFASVAGFRELALQAIKTV 444
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 96/167 (57%), Gaps = 9/167 (5%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGE-----GKDQVLHLVEPD--VLWTENYQHSYPYDW 1158
L+ + +QG+++ +AG GL++L + G V+ ++ +L E Y H YPYDW
Sbjct: 353 LSPVDDQGRFTAEAGSQFVGLDVLSKKPETSGNAAVIQALQAAGALLKEEPYNHKYPYDW 412
Query: 1159 RTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRV 1218
RTK+P I +A++QWF + AL ++ V ++P + + +++R WCISRQR
Sbjct: 413 RTKEPTIFRATEQWFASVAGFRELALQAIKTVKWIPAIGENRITAMVSERSDWCISRQRA 472
Query: 1219 WGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WGVPIPVFYD +T ++ + H + + G D WW PVE+LL
Sbjct: 473 WGVPIPVFYDEETGEPLLTAETLDHIKAIFAQEGSDAWWKRPVEELL 519
>gi|116072087|ref|ZP_01469355.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
gi|116065710|gb|EAU71468.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
Length = 973
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/631 (36%), Positives = 337/631 (53%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG---------------ATDLHALIWT 462
TALAE+ELEY HIS S+Y ++PA L + H IWT
Sbjct: 204 TALAEAELEYPDGHISPSVYAAFPAVELPAALRDALQKEGIVLPSEAEELGNAFHVAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y++A + G ++VA L+E+L T + G L
Sbjct: 264 TTPWTLPANLAVSVNERLDYALADNGNGRLLLVAADLIESLSKTLGLPLTQKATVKGSLL 323
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y HP+ + ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 324 AGLIYRHPLLDRTSPV-VIGGEYITTESGTGLVHTAPGHGVDDFHTGQKHGLPVLCPVDE 382
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AG GLN+L D ++ +E +L E Y H YPYDWRTKKP I +A+
Sbjct: 383 AGTLTDEAG-AFAGLNVLKDANPAIIEALEKADALLKHEPYGHRYPYDWRTKKPTIFRAT 441
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD- 698
+QWF + + +AL +++VN+ P S + + + +R WCISRQR WGVPIPVFY+
Sbjct: 442 EQWFASVDGFRDQALNAIDKVNWTPASGRNRIESMVKERGDWCISRQRTWGVPIPVFYNR 501
Query: 699 -GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN--SNVTKSNDILDIWFDS 755
+++N + H +LI HG D WW +LL + + S+ K D +D+WFDS
Sbjct: 502 TNGEVLLNAETLAHIQSLIAAHGADVWWEKDESELLPAAYASEASDWRKGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE
Sbjct: 562 GSSWAAVASQRDNLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYQRVLTHGFALDE 621
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I G K K+ P YG DVLR WV
Sbjct: 622 KGRKMSKSLGNVVDPMVIIAGGKN--------------------QKQDPPYGADVLRLWV 661
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ S +I +D +M
Sbjct: 662 SS-VDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFDPSRDAIPVSELPLLDRWM 720
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E + ++ + +++ R ++L N+ V++LS FY + KDRLY + R S
Sbjct: 721 LQRSAEVMDDINAAFESYEFYRFFQLLQNYCVSDLSNFYLDIAKDRLYVSAPGDRRRRSC 780
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ ++P
Sbjct: 781 QTVMALIIERLAGMIAPVLCHMAEDIWQNIP 811
Score = 317 bits (811), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/404 (41%), Positives = 235/404 (58%), Gaps = 25/404 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKDI + +L+G+RV +VPGWDCHGLPIELK
Sbjct: 56 NTGPTFTLHDGPPYANGALHMGHALNKVLKDIVNKHQILKGRRVRFVPGWDCHGLPIELK 115
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+P+ +RKKA +A + ++ Q F+ WG+ ADW+ Y + KEY
Sbjct: 116 VLQSMDQEQRKALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWDQP-YLSLQKEYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F ++ + +IYR LKPV+WSPSSRTALAE+ELEY H+S S+Y ++PA
Sbjct: 175 AQIGVFGDMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHISPSVYAAFPAVELPAA 234
Query: 192 LLEG---------------ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANV 235
L + H IWTTTPW+LPAN ++ N L+Y++A + G +
Sbjct: 235 LRDALQKEGIVLPSEAEELGNAFHVAIWTTTPWTLPANLAVSVNERLDYALADNGNGRLL 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+VA L+ESL T + G L + Y HP+ + ++ ++++ GTG
Sbjct: 295 LVAADLIESLSKTLGLPLTQKATVKGSLLAGLIYRHPLLDRTSPV-VIGGEYITTESGTG 353
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG DDF +PVL + G + +AG GLN+L D ++ +E
Sbjct: 354 LVHTAPGHGVDDFHTGQKHGLPVLCPVDEAGTLTDEAG-AFAGLNVLKDANPAIIEALEK 412
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E Y H YPYDWRTKKP I +A++QWF + + +AL
Sbjct: 413 ADALLKHEPYGHRYPYDWRTKKPTIFRATEQWFASVDGFRDQAL 456
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AG GLN+L + ++ +E +L E Y H YPYDWRTKKP I
Sbjct: 380 VDEAGTLTDEAG-AFAGLNVLKDANPAIIEALEKADALLKHEPYGHRYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + +AL ++ VN+ P S + + + +R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASVDGFRDQALNAIDKVNWTPASGRNRIESMVKERGDWCISRQRTWGVPIPVF 498
Query: 1227 YD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y+ +++N + H +LI HG D WW +LL
Sbjct: 499 YNRTNGEVLLNAETLAHIQSLIAAHGADVWWEKDESELL 537
>gi|72383441|ref|YP_292796.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
gi|84029557|sp|Q46HD5.1|SYI_PROMT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|72003291|gb|AAZ59093.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
Length = 967
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 244/631 (38%), Positives = 346/631 (54%), Gaps = 55/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT--------------DLHALIWTT 463
TALAE+ELEY H SKSIY+ K+NQ+P L + + +L +IWTT
Sbjct: 204 TALAEAELEYPTGHTSKSIYVGFKVNQIPKRLTQEISKQAPDLINSEGKLKELKLVIWTT 263
Query: 464 TPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQ 522
TPW++PAN+ I+ N LEY +A S + +I+A L++ + + + + G L
Sbjct: 264 TPWTIPANEAISVNQKLEYVIAQSSDRSLIIIANDLLQEVSKSVGINYEKRVLIKGSILD 323
Query: 523 DITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
I Y HP+ + + +L ++++ GTGLVH AP HG DDF A + + + +
Sbjct: 324 GIIYKHPLFDKISPV-VLGGDYITTESGTGLVHTAPGHGVDDFNTAKKYNLSISCPVDEK 382
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQ 640
G + +AG EGLN+L D ++ L+ L E Y+H YPYDWRTKKP I +A++
Sbjct: 383 GFLTKEAGK-FEGLNVLKDANSVIISDLINAGSLLKEIPYEHRYPYDWRTKKPTIFRATE 441
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD-- 698
QWF E + +AL+ +E+V ++PES K + + +R WCISRQR WGVPIPVFY+
Sbjct: 442 QWFASVEGFRDKALSAIEDVIWLPESGKNRINSMVRERGDWCISRQRTWGVPIPVFYEKN 501
Query: 699 GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN--SNVTKSNDILDIWFDSG 756
G I++N+ I H L HG D WW V +LL S +N K D +D+WFDSG
Sbjct: 502 GQEILLNKETISHIADLFSVHGADIWWEYEVSELLPPSYLNQADRWQKGTDTMDVWFDSG 561
Query: 757 ISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
SWS V+ K PA +Y+EG DQ GWF SSLLTSVA+ APF+ V HGF +DE
Sbjct: 562 SSWSSVISKKENLNYPADLYLEGSDQHRGWFQSSLLTSVAVNEHAPFKKVLTHGFALDEN 621
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL-PAYGVDVLRWWV 870
G KMSKS+GN+I I G KKL PAYG DVLR WV
Sbjct: 622 GRKMSKSLGNIIDPLVIINGGSN---------------------KKLDPAYGADVLRLWV 660
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG NIL D +K+R++ RYLLG L++ SI +D +M
Sbjct: 661 SS-VDYSADVPIGSNILKQISDVYRKVRNTSRYLLGNLYDFDYKIDSIDIANLPLLDKWM 719
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L R E + + Y F++++ + + NF V +LS FY + KDRLY S + R S
Sbjct: 720 LNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYVSSKSDFRRRSC 779
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L + + +AP++ H+AE+++ ++P
Sbjct: 780 QTVLSLVIEKISGLIAPVLCHMAEDIWQNIP 810
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/403 (42%), Positives = 242/403 (60%), Gaps = 24/403 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANGT H+GHA+NK+LKDI + ++GK+V YVPGWDCHGLPIELK
Sbjct: 56 NSGETFTLHDGPPYANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPIELK 115
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + DK L+P+ +RKKA +A + ++ Q F+ WGV DW+ Y + DK++
Sbjct: 116 VLQAMDKSQRAELTPIKLRKKAAAYAKKQVSQQMDGFKRWGVWGDWDQ-PYLSLDKKFEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
+Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H SKSIY+ K+NQ+P
Sbjct: 175 SQIKLFGEMVFKGYIYRGLKPVHWSPSSQTALAEAELEYPTGHTSKSIYVGFKVNQIPKR 234
Query: 192 LLEGAT--------------DLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANVI 236
L + + +L +IWTTTPW++PAN+ I+ N LEY +A S + +I
Sbjct: 235 LTQEISKQAPDLINSEGKLKELKLVIWTTTPWTIPANEAISVNQKLEYVIAQSSDRSLII 294
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
+A L++ + + + E G L I Y HP+ + + +L ++++ GTGL
Sbjct: 295 IANDLLQEVSKSVGINYEKRVLIKGSILDGIIYKHPLFDKISPV-VLGGDYITTESGTGL 353
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEP 355
VH AP HG DDF A + + + +G + +AG EGLN+L D ++ L+
Sbjct: 354 VHTAPGHGVDDFNTAKKYNLSISCPVDEKGFLTKEAGK-FEGLNVLKDANSVIISDLINA 412
Query: 356 DVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E Y+H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 413 GSLLKEIPYEHRYPYDWRTKKPTIFRATEQWFASVEGFRDKAL 455
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 98/165 (59%), Gaps = 5/165 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVIL 1166
+ +G + +AG EGLN+L + ++ L+ L E Y+H YPYDWRTKKP I
Sbjct: 379 VDEKGFLTKEAGK-FEGLNVLKDANSVIISDLINAGSLLKEIPYEHRYPYDWRTKKPTIF 437
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL+ +E V ++PES K + + +R WCISRQR WGVPIPVF
Sbjct: 438 RATEQWFASVEGFRDKALSAIEDVIWLPESGKNRINSMVRERGDWCISRQRTWGVPIPVF 497
Query: 1227 YD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVN 1269
Y+ G I++N+ I H L HG D WW V +LL S +N
Sbjct: 498 YEKNGQEILLNKETISHIADLFSVHGADIWWEYEVSELLPPSYLN 542
>gi|78211836|ref|YP_380615.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
gi|78196295|gb|ABB34060.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
Length = 974
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 236/631 (37%), Positives = 336/631 (53%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL----------LEGATD-----LHALIWT 462
TALAE+ELEY H S S+Y ++P L L TD L IWT
Sbjct: 205 TALAEAELEYPDGHTSPSVYAAFPAVELPEALRDSLKAEGLDLPTETDALGKALQVAIWT 264
Query: 463 TTPWSLPANQFIAFNPALEYSVAS-VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y++A G ++VA L+E L T + + G L
Sbjct: 265 TTPWTLPANLAVSVNERLDYALADDGAGRLLLVAADLIEALSGTLERPLSRRATVKGALL 324
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+TY HP+ + ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 325 AGLTYRHPLLDRTSPV-VIGGDYITTESGTGLVHTAPGHGVDDFHTGQKNGLPVLCPVDE 383
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AGP GLN+L D +++ +E +L E Y H YPYDWRTKKP I +A+
Sbjct: 384 AGNLTDEAGP-FAGLNVLQDANAKIIEALESAGALLKQEAYGHRYPYDWRTKKPTIFRAT 442
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF E + +AL + V + P S + + + +R WCISRQR WGVPIPVFY
Sbjct: 443 EQWFASVEGFRQQALDAIAAVEWTPASGRNRIESMVKERGDWCISRQRTWGVPIPVFYHR 502
Query: 698 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDS 755
+ +++N + + LI EHG D WW LL +D K D +D+WFDS
Sbjct: 503 NNGEVLLNADTLDYIQALIAEHGADVWWEKDEADLLPPTYADQADQWRKGTDTMDVWFDS 562
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE
Sbjct: 563 GSSWAAVARQRDNLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKRVLTHGFALDE 622
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I +G K K+ P YG DVLR WV
Sbjct: 623 KGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPPYGADVLRLWV 662
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ + +T +I +D +M
Sbjct: 663 SS-VDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATDAIPTAELPLLDRWM 721
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E + + + F++ R ++L NF V +LS FY + KDRLY + + R S
Sbjct: 722 LQRTAEVMDEITEAFESFEFFRFFQLLQNFCVTDLSNFYLDIAKDRLYVSAPQDQRRRSC 781
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ +LP
Sbjct: 782 QTVMALIIERLAGLIAPVLCHMAEDIWQNLP 812
Score = 322 bits (825), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/417 (41%), Positives = 242/417 (58%), Gaps = 32/417 (7%)
Query: 10 WQREALNGK-------PEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
W+ + ++GK P F LHDGPPYANG H+GHA+NK+LKD+ + +L G++V YV
Sbjct: 44 WKDQGIDGKLGLNNSGPTFTLHDGPPYANGALHMGHALNKVLKDVINKYQVLNGRQVRYV 103
Query: 63 PGWDCHGLPIELKAITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + S D K L+P+ +RKKA +A + ++ Q F+ WG+ ADWE
Sbjct: 104 PGWDCHGLPIELKVLQSIDQEQRKALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWE 163
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
Y T KEY Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S
Sbjct: 164 QP-YLTLQKEYESAQIRVFGEMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPS 222
Query: 179 IYLKIKLNQVPAHL----------LEGATD-----LHALIWTTTPWSLPANQFIAFNPAL 223
+Y ++P L L TD L IWTTTPW+LPAN ++ N L
Sbjct: 223 VYAAFPAVELPEALRDSLKAEGLDLPTETDALGKALQVAIWTTTPWTLPANLAVSVNERL 282
Query: 224 EYSVA-SVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKL 282
+Y++A G ++VA L+E+L T + + G L +TY HP+ + +
Sbjct: 283 DYALADDGAGRLLLVAADLIEALSGTLERPLSRRATVKGALLAGLTYRHPLLDRTSPV-V 341
Query: 283 LPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNIL 342
+ ++++ GTGLVH AP HG DDF +PVL + G + +AGP GLN+L
Sbjct: 342 IGGDYITTESGTGLVHTAPGHGVDDFHTGQKNGLPVLCPVDEAGNLTDEAGP-FAGLNVL 400
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
D +++ +E +L E Y H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 401 QDANAKIIEALESAGALLKQEAYGHRYPYDWRTKKPTIFRATEQWFASVEGFRQQAL 457
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + +++ +E +L E Y H YPYDWRTKKP I
Sbjct: 381 VDEAGNLTDEAGP-FAGLNVLQDANAKIIEALESAGALLKQEAYGHRYPYDWRTKKPTIF 439
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL + V + P S + + + +R WCISRQR WGVPIPVF
Sbjct: 440 RATEQWFASVEGFRQQALDAIAAVEWTPASGRNRIESMVKERGDWCISRQRTWGVPIPVF 499
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y + +++N + + LI EHG D WW LL
Sbjct: 500 YHRNNGEVLLNADTLDYIQALIAEHGADVWWEKDEADLL 538
>gi|260434590|ref|ZP_05788560.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
gi|260412464|gb|EEX05760.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
Length = 974
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 236/631 (37%), Positives = 338/631 (53%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--------LEGATDLHAL-------IWT 462
TALAE+ELEY H S S+Y ++PA L L+ T++ AL IWT
Sbjct: 205 TALAEAELEYPDGHTSPSVYAAFPAVELPAALRDAFKAEGLDLPTEMDALGKALQVAIWT 264
Query: 463 TTPWSLPANQFIAFNPALEYSVAS-VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y++A G ++VA L+E L T + G L
Sbjct: 265 TTPWTLPANLAVSVNERLDYALADDGAGRLLLVAADLIETLSGTLARPLSRRVTVKGALL 324
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+TY HP+ + ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 325 AGLTYRHPLLDRSSPV-VIGGDYITTESGTGLVHTAPGHGVDDFHTGQKNGLPVLCPVDE 383
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AGP GLN+L D +++ +E +L E Y H YPYDWRTKKP I +A+
Sbjct: 384 AGNLTEEAGP-FAGLNVLKDANPKIIEALESAGALLKQEAYGHRYPYDWRTKKPTIFRAT 442
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF E + +AL + V + P + + + + +R WCISRQR WGVPIPVFY
Sbjct: 443 EQWFASVEGFRQQALDAIAAVEWTPATGRNRIESMVKERGDWCISRQRTWGVPIPVFYHR 502
Query: 698 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDS 755
+++N ++H LI EHG D WW LL ++ K D +D+WFDS
Sbjct: 503 SNGEVLLNADTLEHIQALIAEHGADIWWEKDEADLLPPAYAEQADQWRKGTDTMDVWFDS 562
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +DE
Sbjct: 563 GSSWAAVASQRDNLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKRVLTHGFALDE 622
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I +G K K+ P YG DVLR WV
Sbjct: 623 KGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPPYGADVLRLWV 662
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ + +T +I +D +M
Sbjct: 663 SS-VDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATDAIPIAELPLLDRWM 721
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E + + + F++ R ++L NF V +LS FY + KDRLY + + R S
Sbjct: 722 LQRTAEVMDDITEAFESFEFFRFFQLLQNFCVTDLSNFYLDIAKDRLYVSAPADQRRRSC 781
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ +LP
Sbjct: 782 QTVMALIIERLAGLIAPVLCHMAEDIWQNLP 812
Score = 327 bits (838), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/404 (43%), Positives = 240/404 (59%), Gaps = 25/404 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKDI + +L+G+RVHYVPGWDCHGLPIELK
Sbjct: 57 NSGPTFTLHDGPPYANGALHMGHALNKVLKDIINKYQVLRGRRVHYVPGWDCHGLPIELK 116
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S D K L+P+ +RKKA +A + ++ Q F+ WG+ ADWE Y T K Y
Sbjct: 117 VLQSMDQEQRKALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQP-YLTLQKGYES 175
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y ++PA
Sbjct: 176 AQIRVFGEMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYAAFPAVELPAA 235
Query: 192 L--------LEGATDLHAL-------IWTTTPWSLPANQFIAFNPALEYSVA-SVKGANV 235
L L+ T++ AL IWTTTPW+LPAN ++ N L+Y++A G +
Sbjct: 236 LRDAFKAEGLDLPTEMDALGKALQVAIWTTTPWTLPANLAVSVNERLDYALADDGAGRLL 295
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+VA L+E+L T + G L +TY HP+ + ++ ++++ GTG
Sbjct: 296 LVAADLIETLSGTLARPLSRRVTVKGALLAGLTYRHPLLDRSSPV-VIGGDYITTESGTG 354
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG DDF +PVL + G + +AGP GLN+L D +++ +E
Sbjct: 355 LVHTAPGHGVDDFHTGQKNGLPVLCPVDEAGNLTEEAGP-FAGLNVLKDANPKIIEALES 413
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E Y H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 414 AGALLKQEAYGHRYPYDWRTKKPTIFRATEQWFASVEGFRQQAL 457
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + +++ +E +L E Y H YPYDWRTKKP I
Sbjct: 381 VDEAGNLTEEAGP-FAGLNVLKDANPKIIEALESAGALLKQEAYGHRYPYDWRTKKPTIF 439
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL + V + P + + + + +R WCISRQR WGVPIPVF
Sbjct: 440 RATEQWFASVEGFRQQALDAIAAVEWTPATGRNRIESMVKERGDWCISRQRTWGVPIPVF 499
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +++N ++H LI EHG D WW LL
Sbjct: 500 YHRSNGEVLLNADTLEHIQALIAEHGADIWWEKDEADLL 538
>gi|47212355|emb|CAF93909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 933
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/587 (39%), Positives = 331/587 (56%), Gaps = 75/587 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE--GATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY PDH+S++IY L VPA++ G ++ L+WTT PW++PANQ +
Sbjct: 190 TALAEAELEYNPDHVSRAIYATFPLTTVPANIASEVGLDNVSVLVWTTQPWTIPANQAVC 249
Query: 476 FNPALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+ P +YSV ++ +++A +L T+++ V F G L+ HP+ +
Sbjct: 250 YMPKAQYSVVKRTDSSQMLLIAAERTASLASLLGTELETVGTFTGSQLEGGICKHPVIPD 309
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+ ++LLPA V+ +KGTGLVH APAHG DD+ +A +PV ++ GK++ AGP L
Sbjct: 310 -KFVQLLPANHVTMAKGTGLVHTAPAHGMDDYSVASHFNLPVECMVDEDGKFTELAGPEL 368
Query: 594 EGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L ++ +G D+V+ +++ ++ E HSYPYDWRTK+PVI++ S+QWFIDT +K
Sbjct: 369 HNLAVMTEGTDKVISMLKDCGALVNEERCVHSYPYDWRTKQPVIIRPSRQWFIDTASLKD 428
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
+A L++V+ +PESA+ +L + +R YWCISRQR WGVPIPVFY +T ++N+ +
Sbjct: 429 KAKEALKKVHILPESARGSLLAMLDRRTYWCISRQRSWGVPIPVFYHRETGEPLLNKYTM 488
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-------NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
H +L E G D WW L +E LL + + + + D+LDIWFDSG SW+ V
Sbjct: 489 SHITSLFKEKGSDCWWELPLETLLPEEVLEKSKAGPAIDYVRGEDVLDIWFDSGTSWAAV 548
Query: 763 LKDKP--AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
L++ A Y+EG DQI GWF SSLLTSVA+++ AP+R++ +HGFVV EKG KMSKSVG
Sbjct: 549 LEETGCMADAYLEGKDQIGGWFQSSLLTSVAVRNKAPYRSLVVHGFVVGEKGEKMSKSVG 608
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV+ ++ G K AYG DVLRWWV A ++ V
Sbjct: 609 NVVDPDEVINGGKDTAT---------------------TAYGADVLRWWV-AESNVFSEV 646
Query: 881 PIGKNILNSSQDDVQKI-------------------------------RSSLRYLLGVLH 909
IG N+LNS++DD+ K+ R+SLR+LLG L
Sbjct: 647 QIGANVLNSARDDINKVPRSSSAYCLVNDVFIGLGSCWRHMTDHFLQLRNSLRFLLGNLQ 706
Query: 910 NHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRV 952
+ Y+D YML L ++ + Y EF S V
Sbjct: 707 GFDPQVQATEPADMHYIDQYMLHLLHKYSIKVTDAYSEFGILAGSSV 753
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/403 (48%), Positives = 272/403 (67%), Gaps = 10/403 (2%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGF++LY+WQR + K EF +HDGPPYANG PH+GHA+NKILKDI R +L+G+RVH
Sbjct: 31 KCGFADLYAWQR-SRKAKKEFCVHDGPPYANGDPHVGHALNKILKDIRNRFEMLKGRRVH 89
Query: 61 YVPGWDCHGLPIELKAITS-KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
Y+PGWDCHGLPIELKA+ L+PL IR+KA+ FA E I QKA F+ WGV+ADW+H
Sbjct: 90 YIPGWDCHGLPIELKALGELTPSSLTPLQIRQKARAFAEEAITRQKAAFQRWGVMADWDH 149
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
CY+T Y QL F ++ + +IY+D KPV+WSPSSRTALAE+ELEY PDHVS++I
Sbjct: 150 -CYYTHHGVYEAAQLKVFQEMHGKGFIYQDHKPVFWSPSSRTALAEAELEYNPDHVSRAI 208
Query: 180 YLKIKLNQVPAHLLE--GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--V 235
Y L VPA++ G ++ L+WTT PW++PANQ + + P +YSV ++ +
Sbjct: 209 YATFPLTTVPANIASEVGLDNVSVLVWTTQPWTIPANQAVCYMPKAQYSVVKRTDSSQML 268
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
++A SL T++E V F G L+ HP+ + + ++LLPA V+ +KGTG
Sbjct: 269 LIAAERTASLASLLGTELETVGTFTGSQLEGGICKHPVIPD-KFVQLLPANHVTMAKGTG 327
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH APAHG DD+ +A +PV ++ GK++ AGP L L ++ +G D+V+ +++
Sbjct: 328 LVHTAPAHGMDDYSVASHFNLPVECMVDEDGKFTELAGPELHNLAVMTEGTDKVISMLKD 387
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++ E HSYPYDWRTK+PVI++ S+QWFIDT +K +A
Sbjct: 388 CGALVNEERCVHSYPYDWRTKQPVIIRPSRQWFIDTASLKDKA 430
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 110/173 (63%), Gaps = 9/173 (5%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQH 1152
+ V H NL + GK++ AGP L L ++ EG D+V+ +++ ++ E H
Sbjct: 340 YSVASHFNLPVECMVDEDGKFTELAGPELHNLAVMTEGTDKVISMLKDCGALVNEERCVH 399
Query: 1153 SYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWC 1212
SYPYDWRTK+PVI++ S+QWFIDT +K +A L+ V+ +PESA+ SL + +R YWC
Sbjct: 400 SYPYDWRTKQPVIIRPSRQWFIDTASLKDKAKEALKKVHILPESARGSLLAMLDRRTYWC 459
Query: 1213 ISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
ISRQR WGVPIPVFY +T ++N+ + H +L E G D WW LP+E LL
Sbjct: 460 ISRQRSWGVPIPVFYHRETGEPLLNKYTMSHITSLFKEKGSDCWWELPLETLL 512
>gi|124024122|ref|YP_001018429.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123964408|gb|ABM79164.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 1370
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 236/632 (37%), Positives = 342/632 (54%), Gaps = 56/632 (8%)
Query: 418 TALAESELEYKPDHISKSIY-----------LKIKLN----QVPAHLLEGATDLHALIWT 462
TALAE+ELEY H S S+Y L+ L+ ++P + LE L IWT
Sbjct: 606 TALAEAELEYPDGHTSPSVYAAFPAAKLPESLRTSLSNQGLELPKNGLELGQALQIAIWT 665
Query: 463 TTPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+YS A +G ++VA L+ +L+ T ++ G L
Sbjct: 666 TTPWTLPANLAVSVNEKLDYSFAVDNQGRLLLVAAELLPSLRDTLALELTARATVKGALL 725
Query: 522 QDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLIT 580
+ Y HP+ RD ++ G ++++ GTGLVH AP HG DDF + +L +
Sbjct: 726 AGLIYKHPL--LDRDSPIVIGGEYITTESGTGLVHTAPGHGVDDFNTGKKNDLGMLCPVD 783
Query: 581 NQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKA 638
G + +AGP GLN+L D ++ +E +L E Y H YPYDWRTKKP I +A
Sbjct: 784 ESGTMTSEAGP-FAGLNVLKDANPTIIAALEERGALLKHEPYAHRYPYDWRTKKPTIFRA 842
Query: 639 SQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY- 697
++QWF E + EAL + V ++P S + + + +R WCISRQR WGVPIPVFY
Sbjct: 843 TEQWFASVEGFRNEALTAINSVEWLPASGRNRMEAMVRERGDWCISRQRTWGVPIPVFYE 902
Query: 698 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--TKSNDILDIWFD 754
+G+ +++N+ + H LI EHG D WW + +LL + K D +D+WFD
Sbjct: 903 REGNEVLLNDETLAHVKALITEHGADVWWERNEVELLPPAYAAEAERWRKGTDTMDVWFD 962
Query: 755 SGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVD 809
SG SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP+R V HGF +D
Sbjct: 963 SGSSWAAVASQQDGLAYPAELYLEGSDQHRGWFQSSLLTSVAINSQAPYRQVLTHGFALD 1022
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
EKG KMSKS+GNV+ I G K K+ P YG DVLR W
Sbjct: 1023 EKGRKMSKSLGNVVDPAVIIDGGKN--------------------QKQEPPYGADVLRLW 1062
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVY 925
V++ VPIG +IL D +K+R++ RYLLG LH+ +I+ +D +
Sbjct: 1063 VSS-VDYSADVPIGTSILRQIADVYRKVRNTSRYLLGNLHDFDPERDAIAVPELPLLDRW 1121
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
ML+R E + + T + +++ R ++L ++ V +LS FY + KDRLY S + R S
Sbjct: 1122 MLQRTAEVMDEISTAFDRYEFYRFFQLLQSYCVVDLSNFYLDIAKDRLYVSSPSERRRRS 1181
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L ++P++ H+AE+++ +LP
Sbjct: 1182 CQTVMALIIERLAGAISPVLCHMAEDIWQNLP 1213
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/407 (43%), Positives = 242/407 (59%), Gaps = 27/407 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANG H+GHA+NK+LKDI + +L+G++V +VPGWDCHGLPIELK
Sbjct: 458 NQGQNFTLHDGPPYANGALHMGHALNKVLKDIINKHQILRGRQVRFVPGWDCHGLPIELK 517
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + + + L+PL +RKKA FA + +++Q A F WGV ADWEH Y T KEY
Sbjct: 518 VLQNLNQEQREALTPLKLRKKAAAFARKQVDSQMAGFRRWGVWADWEH-PYLTLQKEYEA 576
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY----------- 180
Q+ F ++++ YIYR LKPV+WSPSSRTALAE+ELEY H S S+Y
Sbjct: 577 AQIQVFGTMFQKGYIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYAAFPAAKLPES 636
Query: 181 LKIKLN----QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANV 235
L+ L+ ++P + LE L IWTTTPW+LPAN ++ N L+YS A +G +
Sbjct: 637 LRTSLSNQGLELPKNGLELGQALQIAIWTTTPWTLPANLAVSVNEKLDYSFAVDNQGRLL 696
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGT 294
+VA L+ SL+ T ++ G L + Y HP+ RD ++ G ++++ GT
Sbjct: 697 LVAAELLPSLRDTLALELTARATVKGALLAGLIYKHPL--LDRDSPIVIGGEYITTESGT 754
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
GLVH AP HG DDF + +L + G + +AGP GLN+L D ++ +E
Sbjct: 755 GLVHTAPGHGVDDFNTGKKNDLGMLCPVDESGTMTSEAGP-FAGLNVLKDANPTIIAALE 813
Query: 355 PD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+L E Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 814 ERGALLKHEPYAHRYPYDWRTKKPTIFRATEQWFASVEGFRNEALTA 860
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ +E +L E Y H YPYDWRTKKP I
Sbjct: 782 VDESGTMTSEAGP-FAGLNVLKDANPTIIAALEERGALLKHEPYAHRYPYDWRTKKPTIF 840
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P S + + + +R WCISRQR WGVPIPVF
Sbjct: 841 RATEQWFASVEGFRNEALTAINSVEWLPASGRNRMEAMVRERGDWCISRQRTWGVPIPVF 900
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ +++N+ + H LI EHG D WW +LL
Sbjct: 901 YEREGNEVLLNDETLAHVKALITEHGADVWWERNEVELL 939
>gi|123965505|ref|YP_001010586.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
gi|166229755|sp|A2BUL8.1|SYI_PROM5 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|123199871|gb|ABM71479.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 965
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/638 (35%), Positives = 339/638 (53%), Gaps = 52/638 (8%)
Query: 418 TALAESELEYKPDHISKSIY-------------LKIKLNQVPAHLLEGATDLHALIWTTT 464
TALAE+ELEY +H S S+Y LK++ + LL L IWTTT
Sbjct: 204 TALAEAELEYPEEHYSSSVYVSLNISNLSDEILLKLEEKDLKNKLLSNLNKLFIAIWTTT 263
Query: 465 PWSLPANQFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
PW++P N+ +A NP + Y A + ++ + AK L+ + + + + + D G L
Sbjct: 264 PWTIPGNEAVAINPRINYVFAEDQNGDIFLFAKDLISEISEKLEREFNTLIDVKGSMLTG 323
Query: 524 ITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 583
I Y HP + ++ ++ ++++ GTG+VH AP HG DDF + +P+ ++ +G
Sbjct: 324 IEYKHPTKNKFCNI-VIGGDYITTESGTGIVHTAPGHGMDDFNVGKKYHLPITCIVDEKG 382
Query: 584 KYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQ 641
+ A GLN+L D D ++ +L E Y+H YPYDWRTKKP I +A++Q
Sbjct: 383 NLNNHA-EKFCGLNVLKDANDLIIEDLKKNNLLLLKEKYKHRYPYDWRTKKPTIFRATEQ 441
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--G 699
WF E + AL +E+V ++P++ KK + + R WCISRQR WGVPIPVFY+ G
Sbjct: 442 WFASVEGFRSSALKAIEDVEWMPKTGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYEKKG 501
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGI 757
I++N I H L +EHG D WW + LL + + K D +D+WFDSG
Sbjct: 502 KEILLNSETINHIQKLFNEHGADIWWDWDEKDLLPKQYKEESDRWIKGLDTMDVWFDSGS 561
Query: 758 SWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKG 812
SW+ V + + PA +Y+EG DQ GWF SSLLTSVA+ + P++ V HGF +DE G
Sbjct: 562 SWAAVCEQREELAYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKKVLTHGFALDENG 621
Query: 813 AKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA 872
KMSKS+GNV+ + I G K PAYG DVLR WV++
Sbjct: 622 RKMSKSLGNVVDPNIIINGG--------------------SNQKIQPAYGADVLRLWVSS 661
Query: 873 HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLK 928
VPIG NIL D +K+R++ RYLLG +H++ I +D +ML
Sbjct: 662 -VDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPIDEEIDIDQLPILDQWMLN 720
Query: 929 RLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLH 988
RL + + + Y +++++ ++L +F V +LS FY + KDRLY + + R +
Sbjct: 721 RLVDVSDQITIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYVSAKSSIRRRTCQF 780
Query: 989 TLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ I L ++P++ H+AE+++ ++P S F
Sbjct: 781 VMSKIVENLAVLISPVLCHMAEDIWQNIPYSTNEKSVF 818
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 227/398 (57%), Gaps = 23/398 (5%)
Query: 20 EFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS 79
+F LHDGPPYANG+ H+GHA+NK+LKDI + L+G +VH+VPGWDCHGLPIELK + S
Sbjct: 60 KFTLHDGPPYANGSLHMGHALNKVLKDIINKYKTLKGFKVHFVPGWDCHGLPIELKVLQS 119
Query: 80 ----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
+ K L L +RKKA ++A I Q F+ WG+ DW+ N Y T Y Q+
Sbjct: 120 LKSHERKDLDSLGLRKKATDYAKIQIKNQLEGFKRWGIWGDWD-NPYLTLKNNYESAQIG 178
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY-------------LK 182
F ++ YIYR LKPV+WSPSSRTALAE+ELEY +H S S+Y LK
Sbjct: 179 VFGKMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPEEHYSSSVYVSLNISNLSDEILLK 238
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IVAKCL 241
++ + LL L IWTTTPW++P N+ +A NP + Y A + ++ + AK L
Sbjct: 239 LEEKDLKNKLLSNLNKLFIAIWTTTPWTIPGNEAVAINPRINYVFAEDQNGDIFLFAKDL 298
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
+ + + + + D G L I Y HP + ++ ++ ++++ GTG+VH AP
Sbjct: 299 ISEISEKLEREFNTLIDVKGSMLTGIEYKHPTKNKFCNI-VIGGDYITTESGTGIVHTAP 357
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLW 359
HG DDF + +P+ ++ +G + A GLN+L D D ++ +L
Sbjct: 358 GHGMDDFNVGKKYHLPITCIVDEKGNLNNHA-EKFCGLNVLKDANDLIIEDLKKNNLLLL 416
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y+H YPYDWRTKKP I +A++QWF E + AL
Sbjct: 417 KEKYKHRYPYDWRTKKPTIFRATEQWFASVEGFRSSAL 454
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Query: 1125 GLNILGEGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 1182
GLN+L + D ++ +L E Y+H YPYDWRTKKP I +A++QWF E +
Sbjct: 393 GLNVLKDANDLIIEDLKKNNLLLLKEKYKHRYPYDWRTKKPTIFRATEQWFASVEGFRSS 452
Query: 1183 ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIK 1240
AL +E V ++P++ KK + + R WCISRQR WGVPIPVFY+ G I++N I
Sbjct: 453 ALKAIEDVEWMPKTGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYEKKGKEILLNSETIN 512
Query: 1241 HFCTLIDEHGPDFWWSLPVEQLL 1263
H L +EHG D WW + LL
Sbjct: 513 HIQKLFNEHGADIWWDWDEKDLL 535
>gi|87125070|ref|ZP_01080917.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
gi|86167390|gb|EAQ68650.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
Length = 969
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 239/631 (37%), Positives = 333/631 (52%), Gaps = 54/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--------LEGATDLHAL-------IWT 462
TALAE+ELEY H S S+Y+ + P L +E D AL IWT
Sbjct: 204 TALAEAELEYPDGHTSPSVYVAFPTLEAPPALRTALQQQGVELPADGDALQDALQVAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYSVAS-VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y +A +G+ +IVA L + L + G L
Sbjct: 264 TTPWTLPANLAVSVNDRLDYCLADDGRGSLLIVAADLRDTLAGKLGRPLAAKAVVKGALL 323
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y HP+ E+ L+ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 324 AGLVYRHPL-LERESPVLVGGEYITTESGTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDE 382
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AGP GLN+L D ++ +E +L E+Y H YPYDWRTKKP I +A+
Sbjct: 383 AGTLTEEAGP-FAGLNVLKDANPAIIDALETAGALLLQESYSHRYPYDWRTKKPTIFRAT 441
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF E + EALA ++ V ++P S + + +A+R WCISRQR WGVPIPVFY
Sbjct: 442 EQWFASVEGFRSEALAAIDAVEWLPASGRNRIEAMVAERGDWCISRQRTWGVPIPVFYHR 501
Query: 698 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--TKSNDILDIWFDS 755
+++N +I H LI EHG D WW LL S V K D +D+WFDS
Sbjct: 502 SSGEVLLNADSIAHIQALIAEHGADVWWENDESVLLPPSHQGEAVQWRKGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP+R V HGF +DE
Sbjct: 562 GSSWAAVASQRDGLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYRTVLTHGFALDE 621
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I +G K K+ P YG DVLR WV
Sbjct: 622 KGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPPYGADVLRLWV 661
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ + +D +M
Sbjct: 662 SS-VDYSADVPIGAGILRQLADVYRKVRNTARYLLGNLHDFDPGRDGVPMEALPLLDRWM 720
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R + + + +++ R ++L N+ V +LS FY + KDRLY + N R S
Sbjct: 721 LQRTAVVLDEISEAFERYEFFRFFQLLQNYCVADLSNFYLDIAKDRLYVSAPNDRRRRSC 780
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L +AP++ H+AE+++ +LP
Sbjct: 781 QTVMALIIERLAGAIAPVLCHMAEDIWQNLP 811
Score = 322 bits (826), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 176/406 (43%), Positives = 237/406 (58%), Gaps = 25/406 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKDI + L+QG+RV +VPGWDCHGLPIELK
Sbjct: 56 NPGPVFTLHDGPPYANGALHMGHALNKVLKDIINKHRLMQGRRVRFVPGWDCHGLPIELK 115
Query: 76 AITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + D + L+PL +RKKA +A + + Q A F+ WG+ ADWEH Y T K+Y
Sbjct: 116 VLQAMDQEQRQALTPLKLRKKAAAYARKQVEGQMAGFKRWGIWADWEHP-YLTLQKDYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y+ + P
Sbjct: 175 AQIEVFGTMALKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPTLEAPPA 234
Query: 192 L--------LEGATDLHAL-------IWTTTPWSLPANQFIAFNPALEYSVA-SVKGANV 235
L +E D AL IWTTTPW+LPAN ++ N L+Y +A +G+ +
Sbjct: 235 LRTALQQQGVELPADGDALQDALQVAIWTTTPWTLPANLAVSVNDRLDYCLADDGRGSLL 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
IVA L ++L + G L + Y HP+ E+ L+ ++++ GTG
Sbjct: 295 IVAADLRDTLAGKLGRPLAAKAVVKGALLAGLVYRHPL-LERESPVLVGGEYITTESGTG 353
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG DDF +PVL + G + +AGP GLN+L D ++ +E
Sbjct: 354 LVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTEEAGP-FAGLNVLKDANPAIIDALET 412
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+L E+Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 413 AGALLLQESYSHRYPYDWRTKKPTIFRATEQWFASVEGFRSEALAA 458
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ +E +L E+Y H YPYDWRTKKP I
Sbjct: 380 VDEAGTLTEEAGP-FAGLNVLKDANPAIIDALETAGALLLQESYSHRYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EALA ++ V ++P S + + +A+R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASVEGFRSEALAAIDAVEWLPASGRNRIEAMVAERGDWCISRQRTWGVPIPVF 498
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWW 1255
Y +++N +I H LI EHG D WW
Sbjct: 499 YHRSSGEVLLNADSIAHIQALIAEHGADVWW 529
>gi|352095072|ref|ZP_08956175.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 8016]
gi|351679083|gb|EHA62225.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 8016]
Length = 968
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 246/640 (38%), Positives = 348/640 (54%), Gaps = 54/640 (8%)
Query: 418 TALAESELEYKPDHISKSIY-----------LKIKLNQ----VPAHLLEGATDLHALIWT 462
TALAE+ELEY H S S+Y L+ KLN+ +PA + L IWT
Sbjct: 204 TALAEAELEYPDGHTSPSVYVGFPVVDLPEGLRSKLNEQGLDLPAQSNALSEGLQVAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYSVAS-VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+Y +A KG +IVA L + + + + G L
Sbjct: 264 TTPWTLPANLAVSVNERLDYCLADDGKGRFLIVAAELCDAIASKLERPLQAKATVKGADL 323
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
ITY HP+ E+R ++ ++++ GTGLVH AP HG DDF +PVL +
Sbjct: 324 AGITYSHPL-LERRSAIVVGGEYITTESGTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDE 382
Query: 582 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKAS 639
G + +AG EGLN+L D ++ +E +L E+Y H YPYDWRTKKP I +A+
Sbjct: 383 AGTLTAEAGR-FEGLNVLKDANAVIITALEDCGSLLLQEDYSHRYPYDWRTKKPTIFRAT 441
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG 699
+QWF E + EAL ++ V ++P S + + +++R WCISRQR WGVPIPVFY
Sbjct: 442 EQWFASVEGFRTEALTAIDGVQWLPASGRNRIESMVSERGDWCISRQRTWGVPIPVFYQR 501
Query: 700 DT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS-DVNSNV-TKSNDILDIWFDS 755
+T +++N +I H LI EHG D WW LL S +++ K D +D+WFDS
Sbjct: 502 ETGEVLLNAESIAHVKALIAEHGADIWWEKDEVDLLPPSHSAEAHLWRKGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ TAP+R V HGF +DE
Sbjct: 562 GSSWASVSSQRDGLSYPADLYLEGSDQHRGWFQSSLLTSVAVNGTAPYRTVLTHGFALDE 621
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNV+ I +G K K+ PAYG DVLR WV
Sbjct: 622 KGRKMSKSLGNVVDPMVIIEGGKN--------------------QKQEPAYGADVLRLWV 661
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG IL D +K+R++ RYLLG LH+ S +I+ +D +M
Sbjct: 662 SS-VDYSADVPIGAGILRQLSDVYRKVRNTSRYLLGNLHDFVPSRDAIAIRELPLLDRWM 720
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R + + + +++ R ++L NF V +LS FY + KDRLY + + R S
Sbjct: 721 LQRTATVLDQISEAFERYEFFRFFQLLQNFCVADLSNFYLDIAKDRLYVSAPTDKRRRSC 780
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ I L +AP++ H+AE+++ ++P T S F
Sbjct: 781 QTVMALIIERLAAAIAPVLCHMAEDIWQNIPYPTETESVF 820
Score = 325 bits (834), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 176/406 (43%), Positives = 242/406 (59%), Gaps = 25/406 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKDI + L+QG++V +VPGWDCHGLPIELK
Sbjct: 56 NPGPMFTLHDGPPYANGALHMGHALNKVLKDIINKHRLMQGRKVRFVPGWDCHGLPIELK 115
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + + + L+P+ +RKKA +A + + Q A F+ WG+ ADWE N Y T K+Y
Sbjct: 116 VLQAMSQEQRQALTPIKLRKKAAAYAHKQVAGQMAGFKRWGIWADWE-NPYLTLQKDYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY----------- 180
Q+ F + + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y
Sbjct: 175 AQIDVFGTMALKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVGFPVVDLPEG 234
Query: 181 LKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANV 235
L+ KLN+ +PA + L IWTTTPW+LPAN ++ N L+Y +A KG +
Sbjct: 235 LRSKLNEQGLDLPAQSNALSEGLQVAIWTTTPWTLPANLAVSVNERLDYCLADDGKGRFL 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
IVA L +++ + ++ G L ITY HP+ E+R ++ ++++ GTG
Sbjct: 295 IVAAELCDAIASKLERPLQAKATVKGADLAGITYSHPL-LERRSAIVVGGEYITTESGTG 353
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG DDF +PVL + G + +AG EGLN+L D ++ +E
Sbjct: 354 LVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTAEAGR-FEGLNVLKDANAVIITALED 412
Query: 356 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+L E+Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 413 CGSLLLQEDYSHRYPYDWRTKKPTIFRATEQWFASVEGFRTEALTA 458
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 5/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AG EGLN+L + ++ +E +L E+Y H YPYDWRTKKP I
Sbjct: 380 VDEAGTLTAEAGR-FEGLNVLKDANAVIITALEDCGSLLLQEDYSHRYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL ++GV ++P S + + +++R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASVEGFRTEALTAIDGVQWLPASGRNRIESMVSERGDWCISRQRTWGVPIPVF 498
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
Y +T +++N +I H LI EHG D WW
Sbjct: 499 YQRETGEVLLNAESIAHVKALIAEHGADIWW 529
>gi|195327961|ref|XP_002030685.1| GM25585 [Drosophila sechellia]
gi|194119628|gb|EDW41671.1| GM25585 [Drosophila sechellia]
Length = 796
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/501 (42%), Positives = 303/501 (60%), Gaps = 49/501 (9%)
Query: 541 PAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG 600
P+ V SKGTGLVH APAHG +DFL++L +KIPV + +G Y+ +A L G ++L
Sbjct: 230 PSVHVQDSKGTGLVHTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTTEAPDFLRGKSVLD 289
Query: 601 DGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEV 660
G VL + DV+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A LE+V
Sbjct: 290 QGNSLVLDRIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPAADALEQV 349
Query: 661 NFVP----ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCT 714
P E++KK L Q+ +RPYWCISRQR WGVPIPV Y ++ +++N A I+HFC
Sbjct: 350 EIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPIPVLYSRESGKVVLNSALIEHFCN 409
Query: 715 LIDEHGP-DFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVL-KDK 766
L+ + G DFWW SVE+L+ + ++ K DILDIWFDSG +WS VL KDK
Sbjct: 410 LLRKEGSIDFWWVKSVEELVPEHLLRELHHEAKDLDKGTDILDIWFDSGSTWSAVLGKDK 469
Query: 767 PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAH 826
A +Y+EG DQ GWF SSLL S+A + AP++ +F+HGF VDEKG KMSKS+GNVI
Sbjct: 470 IADLYLEGYDQFTGWFQSSLLMSIAARECAPYKALFVHGFTVDEKGYKMSKSLGNVI--- 526
Query: 827 DITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNI 886
S IT+ YG D LRWWVA+H ++ ++ + +
Sbjct: 527 --------------------SPKQITK------KYGSDALRWWVASHGTQHMSITVSDKL 560
Query: 887 LNSSQDDVQKIRSSLRYLLGVLHNHSESTG----SISRYVDVYMLKRLCEFQNTMDTLYG 942
L + +++ KIR +LRYL GV+ S S Y++ Y+L +L EF++ ++ LY
Sbjct: 561 LQQAAENLSKIRGTLRYLKGVIGEKQSSENLTQPSDKSYLNRYLLSQLVEFESEVEKLYQ 620
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVA 1002
++Y R + NF+ N++SA Y L+KDRLYC + + L+ TL + + L +++
Sbjct: 621 AYEYNRVVACVQNFIANQVSAVYVHLIKDRLYCG--DDQELLAIRQTLTHCYQQLCKSLW 678
Query: 1003 PIMPHLAEEVYSHLPSRQGTF 1023
PI+P L EE +S+ + F
Sbjct: 679 PIVPFLVEESWSYYDTTGCAF 699
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
S Y QR A GKP F+LHDGPPYANG H+GHAVNKILKDITLR + G++V+Y+
Sbjct: 56 AVSYAYQEQRLAEKGKPTFVLHDGPPYANGQLHMGHAVNKILKDITLRQRVAHGQQVNYI 115
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NC 121
PGWDCHGLPIELKA TS S +IR+K++ FALE I +QK EF SWG+LA+W+ N
Sbjct: 116 PGWDCHGLPIELKA-TSTAPGQSAQEIRQKSRAFALEAIKSQKEEFSSWGILANWQKDNI 174
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF E++ NQL FYNLY++ +YRDLKPVYWSPSSRTALAE+ELEY +H+S S+++
Sbjct: 175 YMTFQPEFIVNQLQMFYNLYEKGLVYRDLKPVYWSPSSRTALAEAELEYDANHISPSVHV 234
Query: 182 K 182
+
Sbjct: 235 Q 235
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 108/163 (66%), Gaps = 7/163 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +G Y+ +A L G ++L +G VL + DV+ + +HSYP DWRTKKPVI++
Sbjct: 267 FVNEEGTYTTEAPDFLRGKSVLDQGNSLVLDRIAEDVVHSSKLEHSYPIDWRTKKPVIIR 326
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVP----ESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
AS+QWFI+TE++K A LE V P E++KK+L Q+ +RPYWCISRQR WGVPI
Sbjct: 327 ASEQWFINTEKLKSPAADALEQVEIYPRANAEASKKALLTQLQKRPYWCISRQRAWGVPI 386
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLL 1263
PV Y ++ +++N A I+HFC L+ + G DFWW VE+L+
Sbjct: 387 PVLYSRESGKVVLNSALIEHFCNLLRKEGSIDFWWVKSVEELV 429
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 78/113 (69%)
Query: 284 PAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG 343
P+ V SKGTGLVH APAHG +DFL++L +KIPV + +G Y+ +A L G ++L
Sbjct: 230 PSVHVQDSKGTGLVHTAPAHGPEDFLVSLTQKIPVKCFVNEEGTYTTEAPDFLRGKSVLD 289
Query: 344 DGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
G VL + DV+ + +HSYP DWRTKKPVI++AS+QWFI+TE++K A
Sbjct: 290 QGNSLVLDRIAEDVVHSSKLEHSYPIDWRTKKPVIIRASEQWFINTEKLKSPA 342
>gi|124025030|ref|YP_001014146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
gi|166229754|sp|A2C071.1|SYI_PROM1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|123960098|gb|ABM74881.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
Length = 967
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 242/631 (38%), Positives = 345/631 (54%), Gaps = 55/631 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT--------------DLHALIWTT 463
TALAE+ELEY H SKSIY+ K+NQ+P L + + ++ +IWTT
Sbjct: 204 TALAEAELEYPTGHTSKSIYVGFKVNQIPKRLTQEISKQAPDLINSEGKLKEVKLVIWTT 263
Query: 464 TPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQ 522
TPW++PAN+ I+ N LEY +A S + +I+A L++ + + + + G L
Sbjct: 264 TPWTIPANEAISVNQKLEYVIAQSSDRSLIIIANDLLDEVSKSVGINYEKRVLIKGSILD 323
Query: 523 DITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
I Y HP+ + + +L ++++ GTGLVH AP HG DDF + + + +
Sbjct: 324 GIIYKHPLFDKISPV-VLGGDYITTESGTGLVHTAPGHGVDDFNTGKKYNLSISCTVDAK 382
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQ 640
G + +AG EGLN+L D ++ L+ L E Y+H YPYDWRTKKP I +A++
Sbjct: 383 GFLTKEAGK-YEGLNVLKDANSVIISDLINSGSLLKEIPYEHRYPYDWRTKKPTIFRATE 441
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD-- 698
QWF E + +AL+ +E+V ++PES K + + +R WCISRQR WGVPIPVFY+
Sbjct: 442 QWFASVEGFRDKALSAIEDVIWLPESGKNRINSMVRERGDWCISRQRTWGVPIPVFYEKN 501
Query: 699 GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN--SNVTKSNDILDIWFDSG 756
G I++N+ I H L HG D WW V +LL S +N K D +D+WFDSG
Sbjct: 502 GQEILLNKETISHIADLFSVHGADIWWEYEVSELLPPSYLNQADRWQKGTDTMDVWFDSG 561
Query: 757 ISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
SWS V+ K PA +Y+EG DQ GWF SSLLTSVA+ APF+ V HGF +DE
Sbjct: 562 SSWSSVISKKENLNYPADLYLEGSDQHRGWFQSSLLTSVAVNEHAPFKKVLTHGFALDEN 621
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL-PAYGVDVLRWWV 870
G KMSKS+GN+I I G KKL PAYG DVLR WV
Sbjct: 622 GRKMSKSLGNIIDPLVIINGGSN---------------------KKLDPAYGADVLRLWV 660
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
++ VPIG NIL D +K+R++ RYLLG L++ SI +D +M
Sbjct: 661 SS-VDYSADVPIGSNILKQISDVYRKVRNTSRYLLGNLYDFDYKIDSIDIANLPLLDKWM 719
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L R E + + Y F++++ + + NF V +LS FY + KDRLY S + R S
Sbjct: 720 LNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYVSSKSDFRRRSC 779
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L + + +AP++ H+AE+++ ++P
Sbjct: 780 QTVLSLVIEKISGLIAPVLCHMAEDIWQNIP 810
Score = 300 bits (769), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/403 (41%), Positives = 241/403 (59%), Gaps = 24/403 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANGT H+GHA+NK+LKDI + ++GK+V YVPGWDCHGLPIELK
Sbjct: 56 NTGETFTLHDGPPYANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPIELK 115
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + DK L+P+ +RKKA +A + ++ Q F+ WGV DW+ Y + DK++
Sbjct: 116 VLQAMDKSQRAELTPIKLRKKAAAYAKKQVSQQMDGFKRWGVWGDWDQ-PYLSLDKKFEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
+Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H SKSIY+ K+NQ+P
Sbjct: 175 SQIKLFGEMVFKGYIYRGLKPVHWSPSSQTALAEAELEYPTGHTSKSIYVGFKVNQIPKR 234
Query: 192 LLEGAT--------------DLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANVI 236
L + + ++ +IWTTTPW++PAN+ I+ N LEY +A S + +I
Sbjct: 235 LTQEISKQAPDLINSEGKLKEVKLVIWTTTPWTIPANEAISVNQKLEYVIAQSSDRSLII 294
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
+A L++ + + + E G L I Y HP+ + + +L ++++ GTGL
Sbjct: 295 IANDLLDEVSKSVGINYEKRVLIKGSILDGIIYKHPLFDKISPV-VLGGDYITTESGTGL 353
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEP 355
VH AP HG DDF + + + +G + +AG EGLN+L D ++ L+
Sbjct: 354 VHTAPGHGVDDFNTGKKYNLSISCTVDAKGFLTKEAGK-YEGLNVLKDANSVIISDLINS 412
Query: 356 DVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E Y+H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 413 GSLLKEIPYEHRYPYDWRTKKPTIFRATEQWFASVEGFRDKAL 455
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 98/165 (59%), Gaps = 5/165 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVIL 1166
+ +G + +AG EGLN+L + ++ L+ L E Y+H YPYDWRTKKP I
Sbjct: 379 VDAKGFLTKEAGK-YEGLNVLKDANSVIISDLINSGSLLKEIPYEHRYPYDWRTKKPTIF 437
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL+ +E V ++PES K + + +R WCISRQR WGVPIPVF
Sbjct: 438 RATEQWFASVEGFRDKALSAIEDVIWLPESGKNRINSMVRERGDWCISRQRTWGVPIPVF 497
Query: 1227 YD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVN 1269
Y+ G I++N+ I H L HG D WW V +LL S +N
Sbjct: 498 YEKNGQEILLNKETISHIADLFSVHGADIWWEYEVSELLPPSYLN 542
>gi|301095723|ref|XP_002896961.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
gi|262108608|gb|EEY66660.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
Length = 1052
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 243/664 (36%), Positives = 355/664 (53%), Gaps = 71/664 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD--------LHALIWTTTPWSLP 469
TALAE+ELEY+ DH+S + Y+K + ++ E A L A++WTTTPW++P
Sbjct: 205 TALAEAELEYQDDHVSHAAYVKFHFASMGSNTSEQAASVLAKYGDRLSAVVWTTTPWTIP 264
Query: 470 ANQFIAFNPALEYSVASVKGA--NVIVAKCLVENLKWTFQTDIDVVC------DFPGQYL 521
+NQ + N LEY + + A ++A L E+ + D + G L
Sbjct: 265 SNQALCVNADLEYVIVRPRNAYSCYLIASALQESFATVLKGDAEEEVELEVLETLNGSDL 324
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA------EKIPV 575
+ + HP+ R+ +L V++ GTG+VH AP HGQDD+ +A E +
Sbjct: 325 EGAHFTHPL--VDREAVVLAGEHVTTDAGTGVVHTAPGHGQDDYFAWMAHHSKPGEHPDI 382
Query: 576 LNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKP 633
+ + G ++ DAG GLEGL +L +G V+ ++ ++L Y H YPYDWRTKKP
Sbjct: 383 ICPVDADGCFTSDAGRGLEGLCVLDEGNMAVIDQLKYSGNLLSIGEYHHRYPYDWRTKKP 442
Query: 634 VILKASQQWFIDTERIKPEALACLEE-VNFVPESAKKTLRDQIAQRPYWCISRQRVWGVP 692
VIL+A+ QWF + + LE+ V VP SA++ L ++ R WCISRQR WG+P
Sbjct: 443 VILRATAQWFARLDTLHARGKRVLEDSVQMVPASARRRLEATLSSRHEWCISRQRAWGLP 502
Query: 693 IPVFYDGDT--IIVNEANIKHFCTLI------------DEHGPDFWWSLSVEQLLNTS-- 736
IPVFY T ++ E +I++ +++ + G D WW LSV +LL S
Sbjct: 503 IPVFYHKTTGEPLITEESIEYLQSIVKTYHVEDENGEVEREGADCWWDLSVRELLPESLK 562
Query: 737 DVNSNVTKSNDILDIWFDSGISWSHVLKD--KP-------AHVYMEGMDQINGWFMSSLL 787
+ K D LD+WFDSG SW VL +P A VY+EG DQ GWF SSLL
Sbjct: 563 SQANQYEKGTDTLDVWFDSGSSWHAVLPGLLEPNEEGQLRADVYLEGSDQHRGWFQSSLL 622
Query: 788 TSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKK-LPAYEKSVGNVI 846
TS+A+++TAP++NV HGF +DE+G+KMSKS+GN I +D G +P EKS N
Sbjct: 623 TSLAMQNTAPYKNVITHGFTLDERGSKMSKSLGNTIVPNDFINGCTMPVPVAEKSSNNKK 682
Query: 847 SAHDITQGAKK--------LPAYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQK 896
A + +K +PAYG DVLR+WV A+ D T V IG ++ + D ++K
Sbjct: 683 KATKNSNKPEKAPKVKQMRVPAYGADVLRFWV---ATTDYTGDVSIGPGVVGKASDALRK 739
Query: 897 IRSSLRYLLGVLHNHSESTGSISR-----YVDVYMLKRLCEFQNTMDTLYGEFQYARASR 951
+R++ R+LLG L + + ++ +D YML + ++ Y F + RA
Sbjct: 740 VRNTARFLLGNLQDFDPAHDAVPYSKMPFSLDRYMLHEVNALAASVTAAYDAFAFNRAQH 799
Query: 952 VLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEE 1011
L +F+ +LSAFY KDRLYCD+ + R S L L R +AP++PH AE+
Sbjct: 800 ALSHFISTDLSAFYMEATKDRLYCDAADSPTRRSAQTVLWLSLQALTRALAPVVPHTAED 859
Query: 1012 VYSH 1015
+ H
Sbjct: 860 IRLH 863
Score = 303 bits (777), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 174/413 (42%), Positives = 237/413 (57%), Gaps = 35/413 (8%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
S Y+ Q E +P F+LHDGPP+ANG+ H+GH +NK LKDI R LL+G+RV YVPG
Sbjct: 44 SAAYAEQAEDTT-RPLFVLHDGPPFANGSLHMGHFLNKTLKDIINRYQLLRGRRVQYVPG 102
Query: 65 WDCHGLPIELKAIT----SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW--- 117
WDCHGLPIE KA+T S D+ LSP +R ++ A + I Q+ +FE WGVLADW
Sbjct: 103 WDCHGLPIEHKALTMLQLSADE-LSPAQVRALSRQLARQAIQEQQKDFERWGVLADWSGA 161
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E + Y T Y Q + I+R KPVYWSPSSRTALAE+ELEY+ DHVS
Sbjct: 162 EDSVYLTMSPSYEARQYDVLKKMVHDGLIFRGFKPVYWSPSSRTALAEAELEYQDDHVSH 221
Query: 178 SIYLKIKLNQVPAHLLEGATD--------LHALIWTTTPWSLPANQFIAFNPALEYSVAS 229
+ Y+K + ++ E A L A++WTTTPW++P+NQ + N LEY +
Sbjct: 222 AAYVKFHFASMGSNTSEQAASVLAKYGDRLSAVVWTTTPWTIPSNQALCVNADLEYVIVR 281
Query: 230 VKGA--NVIVAKCLVESLKWTFQTDI------EVVCDFPGQYLQDITYIHPINKEQRDLK 281
+ A ++A L ES + D EV+ G L+ + HP+ R+
Sbjct: 282 PRNAYSCYLIASALQESFATVLKGDAEEEVELEVLETLNGSDLEGAHFTHPL--VDREAV 339
Query: 282 LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA------EKIPVLNLITNQGKYSPDAGPG 335
+L V++ GTG+VH AP HGQDD+ +A E ++ + G ++ DAG G
Sbjct: 340 VLAGEHVTTDAGTGVVHTAPGHGQDDYFAWMAHHSKPGEHPDIICPVDADGCFTSDAGRG 399
Query: 336 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWF 386
LEGL +L +G V+ ++ ++L Y H YPYDWRTKKPVIL+A+ QWF
Sbjct: 400 LEGLCVLDEGNMAVIDQLKYSGNLLSIGEYHHRYPYDWRTKKPVILRATAQWF 452
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 102/188 (54%), Gaps = 20/188 (10%)
Query: 1099 HFKVYHHLNLIT---NQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHS 1153
H K H ++I G ++ DAG GLEGL +L EG V+ ++ ++L Y H
Sbjct: 373 HSKPGEHPDIICPVDADGCFTSDAGRGLEGLCVLDEGNMAVIDQLKYSGNLLSIGEYHHR 432
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLE-GVNFVPESAKKSLRDQIAQRPYWC 1212
YPYDWRTKKPVIL+A+ QWF + + LE V VP SA++ L ++ R WC
Sbjct: 433 YPYDWRTKKPVILRATAQWFARLDTLHARGKRVLEDSVQMVPASARRRLEATLSSRHEWC 492
Query: 1213 ISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTL------------IDEHGPDFWWSLP 1258
ISRQR WG+PIPVFY T ++ E +I++ ++ ++ G D WW L
Sbjct: 493 ISRQRAWGLPIPVFYHKTTGEPLITEESIEYLQSIVKTYHVEDENGEVEREGADCWWDLS 552
Query: 1259 VEQLLNTS 1266
V +LL S
Sbjct: 553 VRELLPES 560
>gi|87301916|ref|ZP_01084750.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
gi|87283484|gb|EAQ75439.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
Length = 997
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 239/660 (36%), Positives = 343/660 (51%), Gaps = 83/660 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL-----------LEGAT-----DLHALIW 461
TALAE+ELEY H S S+Y+ + +P L E AT DL IW
Sbjct: 197 TALAEAELEYPDGHTSPSVYVAFPVVALPGSLGARLTALGLTHAETATTPDPGDLAVAIW 256
Query: 462 TTTPWSLPANQFIAFNPALEYSVASVK--GAN-------VIVAKCLVENLKWTFQTDIDV 512
TTTPW+LPAN ++ N +LEY++ V GAN +IVA LVE+L+ + Q +++
Sbjct: 257 TTTPWTLPANLAVSVNASLEYALCRVGDHGANGYRTSRHLIVAASLVESLRSSLQLELEP 316
Query: 513 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 572
+ G L+ + Y HP+ + ++ ++++ GTGLVH AP HG DDF
Sbjct: 317 LLSLRGSELEGVEYRHPLFDRTSPV-VIGGDYITTEAGTGLVHTAPGHGVDDFNTGRKAG 375
Query: 573 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRT 630
+PVL + G + +AGP GLN+L D ++ +E +L E Y+H YPYDWRT
Sbjct: 376 LPVLCPVDEGGTLTTEAGP-FAGLNVLKDANPAIISALETAGALLRHEPYEHRYPYDWRT 434
Query: 631 KKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWG 690
KKP I +A++QWF E + +AL + V+++P S + + + R WCISRQR WG
Sbjct: 435 KKPTIFRATEQWFASVEGFRAQALDAIAAVDWLPASGRNRIEAMVRDRGDWCISRQRTWG 494
Query: 691 VPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--TKSN 746
VPIPVFY +T ++N + H LI EHG D WW + +LL S K
Sbjct: 495 VPIPVFYHRETGETLLNADTLAHVEALIAEHGSDVWWEKNEAELLPPSLAAEAAQWRKGT 554
Query: 747 DILDIWFDSGISWSHVLKD--------------------KPAHVYMEGMDQINGWFMSSL 786
D +D+WFDSG SW+ VL PA +Y+EG DQ GWF SSL
Sbjct: 555 DTMDVWFDSGSSWAGVLGGLHAGDASGQAPVAAEATPLRYPADLYLEGSDQHRGWFQSSL 614
Query: 787 LTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVI 846
LTSVA+ AP+R V HGF +DEKG KMSKS+GNV+ + +G K
Sbjct: 615 LTSVAVNGHAPYRRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGKN------------ 662
Query: 847 SAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLG 906
K+ PAYG DVLR WV++ VP+G I+ D +K+R++ RYLLG
Sbjct: 663 --------EKQQPAYGADVLRLWVSS-VDYSADVPLGPGIVKQLADVTRKVRNTARYLLG 713
Query: 907 VLHNH-----SESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFV 957
LH+ +E +++ +D +ML+R + + +++ R + L NF
Sbjct: 714 NLHDFDPRPAAEGGDAVAIADLPLLDRWMLERTASLIEAVSADFERYEFYRFFQALQNFC 773
Query: 958 VNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
V +LS Y + KDRLY + R S L + L +AP++ H+AE+++ +LP
Sbjct: 774 VVDLSNVYLDIAKDRLYVSGASDFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLP 833
Score = 335 bits (860), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 185/426 (43%), Positives = 252/426 (59%), Gaps = 35/426 (8%)
Query: 4 FSELYSWQREALNGKPE-FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
++EL +QR + E F LHDGPPYANG H+GHA+NKILKDI + LL+G+R +V
Sbjct: 36 WAELDLYQRLSRGNPGEVFTLHDGPPYANGPLHVGHALNKILKDILNKYALLRGRRARFV 95
Query: 63 PGWDCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + S + L+P+D+R++A +ALE + QKA F WG+ ADWE
Sbjct: 96 PGWDCHGLPIELKVLQSLSSAERSALTPIDLRRRAHAYALEQVEGQKAGFRRWGIWADWE 155
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
Y T +K Y Q+ F + +IYR LKPV+WSPSSRTALAE+ELEY H S S
Sbjct: 156 QP-YLTLNKAYEAAQIGVFGRMVLAGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPS 214
Query: 179 IYLKIKLNQVPAHL-----------LEGAT-----DLHALIWTTTPWSLPANQFIAFNPA 222
+Y+ + +P L E AT DL IWTTTPW+LPAN ++ N +
Sbjct: 215 VYVAFPVVALPGSLGARLTALGLTHAETATTPDPGDLAVAIWTTTPWTLPANLAVSVNAS 274
Query: 223 LEYSVASVK--GAN-------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPI 273
LEY++ V GAN +IVA LVESL+ + Q ++E + G L+ + Y HP+
Sbjct: 275 LEYALCRVGDHGANGYRTSRHLIVAASLVESLRSSLQLELEPLLSLRGSELEGVEYRHPL 334
Query: 274 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 333
+ ++ ++++ GTGLVH AP HG DDF +PVL + G + +AG
Sbjct: 335 FDRTSPV-VIGGDYITTEAGTGLVHTAPGHGVDDFNTGRKAGLPVLCPVDEGGTLTTEAG 393
Query: 334 PGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
P GLN+L D ++ +E +L E Y+H YPYDWRTKKP I +A++QWF E
Sbjct: 394 P-FAGLNVLKDANPAIISALETAGALLRHEPYEHRYPYDWRTKKPTIFRATEQWFASVEG 452
Query: 392 IKPEAL 397
+ +AL
Sbjct: 453 FRAQAL 458
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ +E +L E Y+H YPYDWRTKKP I
Sbjct: 382 VDEGGTLTTEAGP-FAGLNVLKDANPAIISALETAGALLRHEPYEHRYPYDWRTKKPTIF 440
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL + V+++P S + + + R WCISRQR WGVPIPVF
Sbjct: 441 RATEQWFASVEGFRAQALDAIAAVDWLPASGRNRIEAMVRDRGDWCISRQRTWGVPIPVF 500
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
Y +T ++N + H LI EHG D WW +LL S
Sbjct: 501 YHRETGETLLNADTLAHVEALIAEHGSDVWWEKNEAELLPPS 542
>gi|66800699|ref|XP_629275.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|74996458|sp|Q54CE4.1|SYIM_DICDI RecName: Full=Probable isoleucine--tRNA ligase, mitochondrial;
AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS;
Flags: Precursor
gi|60462665|gb|EAL60867.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 1034
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/638 (36%), Positives = 354/638 (55%), Gaps = 67/638 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG---ATDLH-------ALIWTTTPWS 467
TALA++ELEY +H SKSI++K + + H+L +D++ A+IWTTTPW+
Sbjct: 228 TALADAELEYNNNHTSKSIFVKFNVKSLSNHILNNLPTTSDINKAEMVISAIIWTTTPWT 287
Query: 468 LPANQFIAFNPALEYSVAS------VKGANVIVAKCLVENLKWTFQT-DIDVVCDFPGQY 520
+PANQ I N ++Y + + I++K +E+L +F ++ V+ +F G+
Sbjct: 288 IPANQAICVNSEMDYILVKPIESEQYRNEMFIISKERLESLTKSFNIGELKVILEFKGEQ 347
Query: 521 LQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE--KIPVLNL 578
L+ HP + R+ ++ V GTGLVH AP HG +DF + + + VL+
Sbjct: 348 LKGTITKHP--QYDRESPIITGDHVIEGSGTGLVHTAPGHGVEDFQICQQQYPDLKVLSP 405
Query: 579 ITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 636
+ + G ++ + G GL +LGDG + V++ +E +L E+Y H YPYDWRTKKP+I+
Sbjct: 406 VNDLGCFTDEVGEKFVGLEVLGDGNEAVINDLETIGSLLHKEDYIHKYPYDWRTKKPIII 465
Query: 637 KASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVF 696
+ + QWF+ + I+ AL +E VN VP S L I +R WCISRQRVWG PIPV
Sbjct: 466 RTTLQWFVGLKNIQKTALQSIERVNMVPPSGSNRLSSMIGKRTDWCISRQRVWGCPIPVL 525
Query: 697 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIW 752
Y+ T ++N+ +I H L + G D W+ +S +QLL S D + N K D +D+W
Sbjct: 526 YNCKTNEPLINDESINHIKELFGKFGSDCWFEMSTQQLLPPSLKDQHENFVKGTDTMDVW 585
Query: 753 FDSGISWSHVLKDK--------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLH 804
FDSG SW VL ++ A +Y+EG DQ GWF SSLLTSV ++ P++NV H
Sbjct: 586 FDSGTSWRGVLVERGIIDKDTGRADIYLEGSDQHRGWFQSSLLTSVCVRDIEPYKNVVTH 645
Query: 805 GFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL--PAYG 862
GF++DE G KMSKS+GN I + +G G K+ P YG
Sbjct: 646 GFLLDESGIKMSKSIGNTIVPSTVIKG----------------------GPNKVQNPPYG 683
Query: 863 VDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS-- 919
VD+LR WVA+ SKD + IG NIL D ++KIR++LR++L + + +I
Sbjct: 684 VDLLRTWVASSDYSKD--ISIGPNILIKILDGIKKIRNTLRFMLASNFDFDPTIHAIPYE 741
Query: 920 --RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDS 977
+D Y L R+ + Q ++ Y +FQ+ + ++NF + E+S+FYF ++K LY +S
Sbjct: 742 KLSSLDKYALHRVFKLQESVTRHYDQFQFQKVHTEIINFSI-EISSFYFDVIKRHLYAES 800
Query: 978 INGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
N +R S L + V+ +API H +E+V+ H
Sbjct: 801 PNSHSRRSTQTVLFKMLDVINIALAPITVHTSEDVFLH 838
Score = 321 bits (823), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/415 (41%), Positives = 252/415 (60%), Gaps = 27/415 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ E G+ ++ HDGPPYANG H+GHA+NKILKDI R +L+G +V+Y+PGW
Sbjct: 73 KLYKWQLENNKGE-NWVFHDGPPYANGDLHMGHALNKILKDIVNRYKVLKGFKVNYIPGW 131
Query: 66 DCHGLPIELKAIT--SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
DCHGLPIE +A K + DIRK A +FA + I Q F+ G+L DWE N Y
Sbjct: 132 DCHGLPIEQQAFKKLKKSSDMKASDIRKIAGDFARKEIEKQSKGFQEMGILGDWE-NPYK 190
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T D Y Q+ FY+++ + YIYR +KPV+WSPSSRTALA++ELEY +H SKSI++K
Sbjct: 191 TLDYGYEVEQIQTFYDMFNKGYIYRGVKPVHWSPSSRTALADAELEYNNNHTSKSIFVKF 250
Query: 184 KLNQVPAHLLEG---ATDLH-------ALIWTTTPWSLPANQFIAFNPALEYSVA----- 228
+ + H+L +D++ A+IWTTTPW++PANQ I N ++Y +
Sbjct: 251 NVKSLSNHILNNLPTTSDINKAEMVISAIIWTTTPWTIPANQAICVNSEMDYILVKPIES 310
Query: 229 -SVKGANVIVAKCLVESLKWTFQT-DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG 286
+ I++K +ESL +F +++V+ +F G+ L+ HP + R+ ++
Sbjct: 311 EQYRNEMFIISKERLESLTKSFNIGELKVILEFKGEQLKGTITKHP--QYDRESPIITGD 368
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAE--KIPVLNLITNQGKYSPDAGPGLEGLNILGD 344
V GTGLVH AP HG +DF + + + VL+ + + G ++ + G GL +LGD
Sbjct: 369 HVIEGSGTGLVHTAPGHGVEDFQICQQQYPDLKVLSPVNDLGCFTDEVGEKFVGLEVLGD 428
Query: 345 GKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
G + V++ +E +L E+Y H YPYDWRTKKP+I++ + QWF+ + I+ AL
Sbjct: 429 GNEAVINDLETIGSLLHKEDYIHKYPYDWRTKKPIIIRTTLQWFVGLKNIQKTAL 483
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 4/162 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ + G GL +LG+G + V++ +E +L E+Y H YPYDWRTKKP
Sbjct: 403 LSPVNDLGCFTDEVGEKFVGLEVLGDGNEAVINDLETIGSLLHKEDYIHKYPYDWRTKKP 462
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+I++ + QWF+ + I+ AL +E VN VP S L I +R WCISRQRVWG PI
Sbjct: 463 IIIRTTLQWFVGLKNIQKTALQSIERVNMVPPSGSNRLSSMIGKRTDWCISRQRVWGCPI 522
Query: 1224 PVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PV Y+ T ++N+ +I H L + G D W+ + +QLL
Sbjct: 523 PVLYNCKTNEPLINDESINHIKELFGKFGSDCWFEMSTQQLL 564
>gi|340517198|gb|EGR47443.1| hypothetical protein TRIREDRAFT_63935 [Trichoderma reesei QM6a]
Length = 952
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 250/671 (37%), Positives = 361/671 (53%), Gaps = 53/671 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH+S + Y++ + + VP L E L+A IWTTTPW+LPAN+
Sbjct: 190 TALAEAELEYRDDHVSTAAYVRFPVMSDWSSVPG-LNEFKGRLYAAIWTTTPWTLPANKA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
IA + L+Y+V V ++VA+ VE L+ + + PG L+ + Y + +
Sbjct: 249 IAMHDELDYAVLQVGDDGLLVAESRVEVLQKNMPSAAVIAKSIPGSQLKGLMYRNKLRGS 308
Query: 534 QRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
L+ ++ A FVS+ GTGLVH AP HGQ+D+ A I IT++G ++ +A P
Sbjct: 309 SSSLQPIVHADFVSADSGTGLVHMAPGHGQEDYQACSAFGIEAFAPITDEGHFTAEAYPD 368
Query: 593 -----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
+IL G VL LV DVLWT +H YPYDWRTKKPV+++A+ QWF D E
Sbjct: 369 DPEKLTSAPSILEGGSQAVLDLVGEDVLWTHKLEHKYPYDWRTKKPVVIRATAQWFADVE 428
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVN 705
IK +AL L +V FVPES + L + R WCISRQR WGVPIP YD G+ ++ +
Sbjct: 429 SIKEDALQALSKVRFVPESGRVRLESFVKGRSEWCISRQRSWGVPIPALYDENGNAVMTD 488
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
E +I+H +++ + D W+S + + + + D +D+WFDSG SW+ +
Sbjct: 489 E-SIEHIISVMQQKTSDAWFSDAPDDPAWIAPSLKGTYRRGTDTMDVWFDSGSSWTEI-- 545
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVALKH---------TAPFRNVFLHGFVVDEKGAKM 815
+P VY+EG DQ GWF SSLLT VA + +APF + HGF +D +G KM
Sbjct: 546 GRPVDVYLEGSDQHRGWFQSSLLTFVAAQKADGKARADISAPFGTLITHGFTLDAQGKKM 605
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GN I +I +G K LP K+ GN D T K+ A G D +R W AA +
Sbjct: 606 SKSLGNTIVPSEIMEG-KLLPPL-KTKGN-----DTT---KRFDALGADAMRLW-AASSD 654
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQN 935
+ +G +IL + + K R++L+ LLG LH S +++ + +L + Q+
Sbjct: 655 FTSDILVGASILQPIHNALIKYRTTLKMLLGSLH-QSALQAPLTKLDQIAIL----QLQD 709
Query: 936 TMDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
M + YG +++ +A+ ++ ++ +LSAFY +KDRLYC G L
Sbjct: 710 VMAQVWEAYGNYEFHKATGLINRWIATDLSAFYLEALKDRLYCGDGGG--------VLVP 761
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGE 1052
I + LR +API P L EE +SH PS +SF H L S I L D
Sbjct: 762 ILYGFLRMLAPITPMLVEEAWSHRPSWMAEDASFEHPARQLYNSPVIDPARLTLDQAQLR 821
Query: 1053 ARLSGLHTLHN 1063
L L +H+
Sbjct: 822 RDLPVLSAVHD 832
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/402 (45%), Positives = 243/402 (60%), Gaps = 13/402 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
Y WQ + F+LHDGPPYANG H GHA+NK LKDI R+ + G+RV Y P WD
Sbjct: 36 FYQWQTSNRPRENPFVLHDGPPYANGPLHAGHAINKTLKDIINRTQVQAGRRVMYRPSWD 95
Query: 67 CHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTF 125
CHGLPIE+KA+ S K LSP IR+ A+ A +TI Q F+S+ V+A+W+ N + T
Sbjct: 96 CHGLPIEMKALGESGTKGLSPPKIRESARRLASKTILDQMKGFKSFAVMAEWD-NKWTTM 154
Query: 126 DKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL 185
D+ + QL F + + IYR KPVYWSPSSRTALAE+ELEY+ DHVS + Y++ +
Sbjct: 155 DRAFEIRQLRVFQKMVRSGLIYRKHKPVYWSPSSRTALAEAELEYRDDHVSTAAYVRFPV 214
Query: 186 ----NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ VP L E L+A IWTTTPW+LPAN+ IA + L+Y+V V ++VA+
Sbjct: 215 MSDWSSVPG-LNEFKGRLYAAIWTTTPWTLPANKAIAMHDELDYAVLQVGDDGLLVAESR 273
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCA 300
VE L+ + + PG L+ + Y + + L+ ++ A FVS+ GTGLVH A
Sbjct: 274 VEVLQKNMPSAAVIAKSIPGSQLKGLMYRNKLRGSSSSLQPIVHADFVSADSGTGLVHMA 333
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLVEP 355
P HGQ+D+ A I IT++G ++ +A P +IL G VL LV
Sbjct: 334 PGHGQEDYQACSAFGIEAFAPITDEGHFTAEAYPDDPEKLTSAPSILEGGSQAVLDLVGE 393
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
DVLWT +H YPYDWRTKKPV+++A+ QWF D E IK +AL
Sbjct: 394 DVLWTHKLEHKYPYDWRTKKPVVIRATAQWFADVESIKEDAL 435
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Query: 1109 ITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
IT++G ++ +A P +IL G VL LV DVLWT +H YPYDWRTKKP
Sbjct: 355 ITDEGHFTAEAYPDDPEKLTSAPSILEGGSQAVLDLVGEDVLWTHKLEHKYPYDWRTKKP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+++A+ QWF D E IK +AL L V FVPES + L + R WCISRQR WGVPI
Sbjct: 415 VVIRATAQWFADVESIKEDALQALSKVRFVPESGRVRLESFVKGRSEWCISRQRSWGVPI 474
Query: 1224 PVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
P YD G+ ++ +E +I+H +++ + D W+S
Sbjct: 475 PALYDENGNAVMTDE-SIEHIISVMQQKTSDAWFS 508
>gi|449513369|ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
Length = 1093
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 355/645 (55%), Gaps = 70/645 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-NQVPAH---LLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY +L + P+ L E DL IWTTTPW++PAN
Sbjct: 293 TALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQEFLPDLCLAIWTTTPWTIPANAA 352
Query: 474 IAFNPALEYSV---------ASVKGAN----------------VIVAKCLVENLKWTFQT 508
+A N L Y++ SV N ++VA LV L+ +
Sbjct: 353 VAVNAKLHYAIIELLAPSEDVSVLTGNKKKRPGNILKEGKRPFLVVASDLVPTLEAKWGV 412
Query: 509 DIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 568
+ V G L++ +YIHPI+K++ + ++ ++++ GTGLVH AP HGQ+D+
Sbjct: 413 KLVVKKKLLGSELENCSYIHPIDKKECQV-VIGGDYITTETGTGLVHTAPGHGQEDYATG 471
Query: 569 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPY 626
L +P+++ + + GK++ +AG GL++LGDG V+ ++ ++ E+Y+H YPY
Sbjct: 472 LKYGLPIISPVDDDGKFTEEAGQ-FSGLDVLGDGNTAVVKYLDDHFSLILEESYEHKYPY 530
Query: 627 DWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQ 686
DWRTKKP I +A++QWF E + A+ + EV ++P A+ + + R WCISRQ
Sbjct: 531 DWRTKKPTIFRATEQWFASVEGFRQAAVDAIGEVKWIPPQAENRISAMTSSRSDWCISRQ 590
Query: 687 RVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNV 742
R WGVPIPVFY +T ++N+ I H ++I + G D WW ++V+ LL ++ S+
Sbjct: 591 RTWGVPIPVFYHVETKEPLMNDDTINHIKSIIAKKGSDAWWYMAVDDLLPDKYREIASDY 650
Query: 743 TKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAP 797
K D +D+WFDSG SW+ VL + PA +Y+EG DQ GWF SSLLT +A K AP
Sbjct: 651 EKGTDTMDVWFDSGSSWAAVLGTRDGFSFPADLYLEGTDQHRGWFQSSLLTCIATKGKAP 710
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
+ +V HGFV+DEKG KMSKS+GNV+ + +G K K+
Sbjct: 711 YASVVTHGFVLDEKGLKMSKSLGNVVDPKGVIEGGKN--------------------QKE 750
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS 917
P YG DVLR WV++ V IG +L D +K+R +LR+LLG LH+ +E
Sbjct: 751 APGYGADVLRLWVSS-VDYTGDVMIGSQVLRQMSDIYRKLRGTLRFLLGNLHDWTEENA- 808
Query: 918 ISRYVDVYMLKRLCEFQ-----NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
+Y D+ + + FQ N + Y +Q+ + +++ FV+ +LS FYF + KDR
Sbjct: 809 -VQYQDLPKIDQHALFQLENVINNIRESYESYQFFKIFQIIQRFVIVDLSNFYFDVAKDR 867
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
LY R S L + R +API+PHLAE+V+ +LP
Sbjct: 868 LYVGGSTSFTRRSCQTVLAAHVVSIARIIAPILPHLAEDVWQNLP 912
Score = 309 bits (791), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 178/417 (42%), Positives = 248/417 (59%), Gaps = 38/417 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +V +VPGWDCHGLPIELK
Sbjct: 145 NTGENFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVRFVPGWDCHGLPIELK 204
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S DK L+P+ +R KA FA T+ Q A F+ +GV ADW +N Y T EY
Sbjct: 205 VLQSLDKEARKDLTPIKLRDKAAKFAKATVKAQMASFKRYGVWADW-NNPYLTLSPEYEA 263
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL-NQVPA 190
Q+ F + Q YI+R KPV+WSPSSRTALAE+ELEY H S+SIY +L + P+
Sbjct: 264 AQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPS 323
Query: 191 H---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV---------ASVKGAN---- 234
L E DL IWTTTPW++PAN +A N L Y++ SV N
Sbjct: 324 SGGVLQEFLPDLCLAIWTTTPWTIPANAAVAVNAKLHYAIIELLAPSEDVSVLTGNKKKR 383
Query: 235 ------------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKL 282
++VA LV +L+ + + V G L++ +YIHPI+K++ + +
Sbjct: 384 PGNILKEGKRPFLVVASDLVPTLEAKWGVKLVVKKKLLGSELENCSYIHPIDKKECQV-V 442
Query: 283 LPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNIL 342
+ ++++ GTGLVH AP HGQ+D+ L +P+++ + + GK++ +AG GL++L
Sbjct: 443 IGGDYITTETGTGLVHTAPGHGQEDYATGLKYGLPIISPVDDDGKFTEEAGQ-FSGLDVL 501
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
GDG V+ ++ ++ E+Y+H YPYDWRTKKP I +A++QWF E + A+
Sbjct: 502 GDGNTAVVKYLDDHFSLILEESYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAV 558
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + GK++ +AG GL++LG+G V+ ++ ++ E+Y+H YPYDWRTKKP I
Sbjct: 482 VDDDGKFTEEAGQ-FSGLDVLGDGNTAVVKYLDDHFSLILEESYEHKYPYDWRTKKPTIF 540
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + A+ + V ++P A+ + + R WCISRQR WGVPIPVF
Sbjct: 541 RATEQWFASVEGFRQAAVDAIGEVKWIPPQAENRISAMTSSRSDWCISRQRTWGVPIPVF 600
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +T ++N+ I H ++I + G D WW + V+ LL
Sbjct: 601 YHVETKEPLMNDDTINHIKSIIAKKGSDAWWYMAVDDLL 639
>gi|33864084|ref|NP_895644.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
gi|81573102|sp|Q7TUN3.1|SYI_PROMM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|33635668|emb|CAE21992.1| t-RNA synthetase, class Ia:Isoleucyl-tRNA synthetase [Prochlorococcus
marinus str. MIT 9313]
Length = 968
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/632 (37%), Positives = 337/632 (53%), Gaps = 56/632 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---------------LEGATDLHALIWT 462
TALAE+ELEY H S S+Y+ ++P L LE L IWT
Sbjct: 204 TALAEAELEYPDGHTSPSVYVAFPAAKLPEKLRTSLGNQGLELPNNGLELGQALQIAIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
TTPW+LPAN ++ N L+YS A +G ++VA L+ +L+ T ++ G L
Sbjct: 264 TTPWTLPANLAVSVNEKLDYSFAVDNQGRLLLVAAELLPSLRDTLALELTARATVKGALL 323
Query: 522 QDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLIT 580
+ Y HP+ RD ++ G ++++ GTGLVH AP HG DDF + +L +
Sbjct: 324 AGLIYKHPL--LDRDSPIVIGGEYITTESGTGLVHTAPGHGVDDFNTGQKHDLGMLCPVD 381
Query: 581 NQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKA 638
G + +AGP GLN+L D ++ +E +L E Y H YPYDWRTKKP I +A
Sbjct: 382 ESGTMTSEAGP-FAGLNVLKDANPTIIAALEERGALLKHEPYAHRYPYDWRTKKPTIFRA 440
Query: 639 SQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY- 697
++QWF E + EAL + V ++P S + + + +R WCISRQR WGVPIPVFY
Sbjct: 441 TEQWFASVEGFRNEALTAINSVEWLPASGRNRMEAMVRERGDWCISRQRTWGVPIPVFYE 500
Query: 698 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV--NSNVTKSNDILDIWFD 754
+G+ +++N+ + H LI EHG D WW + +LL + K D +D+WFD
Sbjct: 501 REGNEVLLNDETLAHVKALITEHGADVWWERNEVELLPPAYAAEAERWRKGTDTMDVWFD 560
Query: 755 SGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVD 809
SG SW+ V + P +Y+EG DQ GWF SSLLTSVA+ AP+R V HGF +D
Sbjct: 561 SGSSWAAVASQQEGLAYPTELYLEGSDQHRGWFQSSLLTSVAINSQAPYRQVLTHGFALD 620
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
EKG KMSKS+GNV+ I G K K+ P YG DVLR W
Sbjct: 621 EKGRKMSKSLGNVVDPAVIIDGGKN--------------------QKQEPPYGADVLRLW 660
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVY 925
V++ VPIG +IL D +K+R++ RYLLG LH+ +I +D +
Sbjct: 661 VSS-VDYSADVPIGASILRQIADVYRKVRNTSRYLLGNLHDFDPERDAIPVPELPLLDRW 719
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
ML+R E + + T + +++ R ++L ++ V +LS FY + KDRLY S + R S
Sbjct: 720 MLQRTAEVMDEISTAFDRYEFYRFFQLLQSYCVVDLSNFYLDIAKDRLYVSSPSERRRRS 779
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I L ++P++ H+AE+++ +LP
Sbjct: 780 CQTAMALIIERLAGAISPVLCHMAEDIWQNLP 811
Score = 323 bits (828), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 175/407 (42%), Positives = 239/407 (58%), Gaps = 27/407 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANG H+GHA+NK+LKDI + +L+G++V +VPGWDCHGLPIELK
Sbjct: 56 NQGQNFTLHDGPPYANGALHMGHALNKVLKDIINKHQILRGRQVRFVPGWDCHGLPIELK 115
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + + + L+PL +RKKA FA + +++Q A F WG+ ADWEH Y T KEY
Sbjct: 116 VLQNLNQEQREALTPLKLRKKAAAFARKQVDSQMAGFRRWGIWADWEHP-YLTLQKEYEA 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F ++++ YIYR LKPV+WSPSSRTALAE+ELEY H S S+Y+ ++P
Sbjct: 175 AQIQVFGKMFQKGYIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAAKLPEK 234
Query: 192 L---------------LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANV 235
L LE L IWTTTPW+LPAN ++ N L+YS A +G +
Sbjct: 235 LRTSLGNQGLELPNNGLELGQALQIAIWTTTPWTLPANLAVSVNEKLDYSFAVDNQGRLL 294
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGT 294
+VA L+ SL+ T ++ G L + Y HP+ RD ++ G ++++ GT
Sbjct: 295 LVAAELLPSLRDTLALELTARATVKGALLAGLIYKHPL--LDRDSPIVIGGEYITTESGT 352
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
GLVH AP HG DDF + +L + G + +AGP GLN+L D ++ +E
Sbjct: 353 GLVHTAPGHGVDDFNTGQKHDLGMLCPVDESGTMTSEAGP-FAGLNVLKDANPTIIAALE 411
Query: 355 PD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+L E Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 412 ERGALLKHEPYAHRYPYDWRTKKPTIFRATEQWFASVEGFRNEALTA 458
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ +E +L E Y H YPYDWRTKKP I
Sbjct: 380 VDESGTMTSEAGP-FAGLNVLKDANPTIIAALEERGALLKHEPYAHRYPYDWRTKKPTIF 438
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + EAL + V ++P S + + + +R WCISRQR WGVPIPVF
Sbjct: 439 RATEQWFASVEGFRNEALTAINSVEWLPASGRNRMEAMVRERGDWCISRQRTWGVPIPVF 498
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ +++N+ + H LI EHG D WW +LL
Sbjct: 499 YEREGNEVLLNDETLAHVKALITEHGADVWWERNEVELL 537
>gi|427703156|ref|YP_007046378.1| isoleucyl-tRNA synthetase [Cyanobium gracile PCC 6307]
gi|427346324|gb|AFY29037.1| isoleucyl-tRNA synthetase [Cyanobium gracile PCC 6307]
Length = 983
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/634 (36%), Positives = 338/634 (53%), Gaps = 57/634 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--------LEGATD------LHALIWTT 463
TALAE+ELEY H S S+Y+ + +PA L + G TD L IWTT
Sbjct: 197 TALAEAELEYPDGHTSPSVYVAFPVVDLPAPLAGLLADAGIAGPTDAAHREQLFVAIWTT 256
Query: 464 TPWSLPANQFIAFNPALEYSVASVKGAN------VIVAKCLVENLKWTFQTDIDVVCDFP 517
TPW+LPAN ++ N L+Y++ N ++VA LV+ L+ + + ++ +
Sbjct: 257 TPWTLPANLAVSVNGQLDYAICRDGTTNGGTPRYLVVAAQLVDQLRTSLERPLEPLLTLK 316
Query: 518 GQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLN 577
G L+ I Y HP+ + ++ ++++ GTGLVH AP HG DDF +PVL
Sbjct: 317 GAQLEGIQYRHPLLDRTSPV-VIGGDYITTETGTGLVHTAPGHGVDDFHTGNKYGLPVLC 375
Query: 578 LITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 635
+ G + +AGP GLN+L D ++ + +L + Y+H YPYDWRTKKP I
Sbjct: 376 PVDEAGTLTAEAGP-FAGLNVLKDANPAIITALRDAGLLLAEQRYEHRYPYDWRTKKPTI 434
Query: 636 LKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPV 695
+A++QWF + + +AL + V ++P S + + + R WCISRQR WGVPIPV
Sbjct: 435 FRATEQWFASVDGFRAQALEAIAVVEWLPASGRNRIEAMVRDRGDWCISRQRSWGVPIPV 494
Query: 696 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNT--SDVNSNVTKSNDILDI 751
FY +T +++N + H LI EHG D WW LL +D K D +D+
Sbjct: 495 FYHRETGEVLLNADTLAHAEALIAEHGADVWWERDEAGLLPPAWADQADQWRKGTDTMDV 554
Query: 752 WFDSGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFV 807
WFDSG SW+ VL+ + PA +Y+EG DQ GWF SSLLTSVA+ AP+R V HGF
Sbjct: 555 WFDSGSSWAAVLQSRGLGYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYRRVLTHGFT 614
Query: 808 VDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLR 867
+DEKG KMSKS+GNV+ + +G K K+ P YG DVLR
Sbjct: 615 LDEKGRKMSKSLGNVVDPVVLVEGGKN--------------------EKQEPPYGADVLR 654
Query: 868 WWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVD 923
WV++ VP+G I+ D +K+R++ RYLLG LH+ + +++ +D
Sbjct: 655 LWVSS-VDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFVPAEHAVAIEDLPLLD 713
Query: 924 VYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEAR 983
+ML+R ++ + +++ R + L NF V +LS Y + KDRLY + R
Sbjct: 714 RWMLQRTASLIEAVNADFERYEFYRFFQALQNFCVVDLSNVYLDIAKDRLYVSAAGDVRR 773
Query: 984 LSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
S LH + L +AP++ H+AE+++ +LP
Sbjct: 774 RSCQTVLHLVVERLAGLIAPVLCHMAEDIWQNLP 807
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/418 (40%), Positives = 242/418 (57%), Gaps = 30/418 (7%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY + G P F LHDGPPYANG H+GHA+NKILKDI + LLQG+R +VPGW
Sbjct: 40 DLYGRLSRSNPGAP-FTLHDGPPYANGALHVGHALNKILKDIINKHALLQGRRARFVPGW 98
Query: 66 DCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
DCHGLPIELK + + + L+P+D+R++A +ALE + Q++ F WG+ ADW+
Sbjct: 99 DCHGLPIELKVLQGLGGEERRGLTPIDLRRRAHAYALEQVEAQRSGFRRWGIWADWDEP- 157
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T K Y Q+ F + +IYR LKPV+WSPSSRTALAE+ELEY H S S+Y+
Sbjct: 158 YLTLQKSYEAAQIGVFGKMVLAGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYV 217
Query: 182 KIKLNQVPAHL--------LEGATD------LHALIWTTTPWSLPANQFIAFNPALEYSV 227
+ +PA L + G TD L IWTTTPW+LPAN ++ N L+Y++
Sbjct: 218 AFPVVDLPAPLAGLLADAGIAGPTDAAHREQLFVAIWTTTPWTLPANLAVSVNGQLDYAI 277
Query: 228 ASVKGAN------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK 281
N ++VA LV+ L+ + + +E + G L+ I Y HP+ +
Sbjct: 278 CRDGTTNGGTPRYLVVAAQLVDQLRTSLERPLEPLLTLKGAQLEGIQYRHPLLDRTSPV- 336
Query: 282 LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNI 341
++ ++++ GTGLVH AP HG DDF +PVL + G + +AGP GLN+
Sbjct: 337 VIGGDYITTETGTGLVHTAPGHGVDDFHTGNKYGLPVLCPVDEAGTLTAEAGP-FAGLNV 395
Query: 342 LGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L D ++ + +L + Y+H YPYDWRTKKP I +A++QWF + + +AL
Sbjct: 396 LKDANPAIITALRDAGLLLAEQRYEHRYPYDWRTKKPTIFRATEQWFASVDGFRAQAL 453
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 5/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP GLN+L + ++ + +L + Y+H YPYDWRTKKP I
Sbjct: 377 VDEAGTLTAEAGP-FAGLNVLKDANPAIITALRDAGLLLAEQRYEHRYPYDWRTKKPTIF 435
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + +AL + V ++P S + + + R WCISRQR WGVPIPVF
Sbjct: 436 RATEQWFASVDGFRAQALEAIAVVEWLPASGRNRIEAMVRDRGDWCISRQRSWGVPIPVF 495
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
Y +T +++N + H LI EHG D WW
Sbjct: 496 YHRETGEVLLNADTLAHAEALIAEHGADVWW 526
>gi|281208129|gb|EFA82307.1| isoleucyl-tRNA synthetase [Polysphondylium pallidum PN500]
Length = 993
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 260/755 (34%), Positives = 392/755 (51%), Gaps = 78/755 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAF 476
TALA++ELEY H+SKSI+LK + +V + L L+A+IWTTTPW++PAN I
Sbjct: 222 TALADAELEYNEQHVSKSIFLKFAMKKVSSGLQRFDNGKLNAVIWTTTPWTIPANLAICV 281
Query: 477 NPALEYSVASVK-GANVIVAKCLVENLKWTFQTDIDVVCD---FPGQYLQDITYIHPINK 532
N L+Y V + ++++ +E+L+ F+ + +V G L HP+
Sbjct: 282 NAGLDYVVVEGRDNERYLISRERLESLREQFKLPLPIVEGAEAIKGADLFGTVTAHPMYG 341
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RD +L V + GTGLVH AP HG +DF + KI ++ + + G ++ G
Sbjct: 342 --RDSPILLGEHVVTGSGTGLVHTAPGHGVEDFAICQQHKIEPISPVDDNGCFTEQVGR- 398
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
GL +LG G D V+ ++ V+ +ENY H YPYDWRTKKP I++ ++QWF+D ++
Sbjct: 399 FAGLEVLGAGNDAVIEELKSLNSVVHSENYVHKYPYDWRTKKPTIIRTTRQWFVDLSGVQ 458
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTIIVNEA 707
A+ +E +N VP S L + +R WCISRQR WGVPIPVFY+ GD VN+
Sbjct: 459 SLAVKSIENINMVPPSGSNRLSSMVGKRNDWCISRQRYWGVPIPVFYEKSSGDH-FVNQE 517
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVL-- 763
+ H L +HG D W+S+ +LL +S D K D +D+WFDSG SW VL
Sbjct: 518 TMSHVLELFKKHGSDCWFSMETAELLPSSMADKAHLYEKGMDTMDVWFDSGTSWRGVLVA 577
Query: 764 -----KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
D+ A +Y+EG DQ GWF SSLLTS+ + AP++NV HGF++DEKG K SKS
Sbjct: 578 RGVMSMDESADIYLEGSDQHRGWFQSSLLTSICARGIAPYKNVVTHGFLLDEKGNKQSKS 637
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKD 877
+GN I+ I G GN + + PAYGVD+LR W+A + +KD
Sbjct: 638 LGNTIAPSLIIHG-----------GNNKTEN---------PAYGVDMLRMWIATSDYTKD 677
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
+ +G IL D+V+KIR+++RY+LG + S+ + +D Y L ++
Sbjct: 678 --ISVGPTILTKVLDNVKKIRNTVRYMLGANFDFQPEKHSVPYHQLSEIDKYALHKVYVL 735
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y +F + + ++ ++NF +E+SAFYF ++K RLY ++ + R S L +
Sbjct: 736 SENATKYYDQFHFQKVTQEVINF-CHEISAFYFDIIKQRLYVEAPDNNLRRSSQTVLFEM 794
Query: 994 FHVLLRTVAPIMPHLAEEVYSH-LPSRQGTFSSFC-----------HFKVYLQYSGSIAK 1041
V+ + +API H E++Y H R+ T S F + ++ Q+ I
Sbjct: 795 LDVVNKIIAPIAIHTCEDIYKHQYKYREPTESVFTQGWTRVKPEWNNAQLLDQWGCIITV 854
Query: 1042 RILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSS-FCHF 1100
R L+ + + E R G+ + + L+ +P Y HL S Q FC
Sbjct: 855 RDLF-NRLLQEVRDKGIIGRPDETMITLKVSSPF--------YDHLKSNQSQLEDIFCVS 905
Query: 1101 KVYHHLNLITNQG-KYSPDAGPGLEGLNILGEGKD 1134
KV L+ +Q P +++LG+G D
Sbjct: 906 KV----ELVHDQSVDIKEPEQPSTSRISVLGDGGD 936
Score = 326 bits (835), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 178/411 (43%), Positives = 254/411 (61%), Gaps = 17/411 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
SELY WQ E N ++I HDGPPYANG H+GHA+NK LKD R +L+G +V+Y+PG
Sbjct: 65 SELYKWQ-ENNNTGEKWIFHDGPPYANGDLHLGHALNKTLKDFVNRYKILRGYKVNYIPG 123
Query: 65 WDCHGLPIELKAITS--KDK-LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WDCHGLPIE+KA S KD+ LL P D+RK A +FA + + Q F++WG++ DW+ N
Sbjct: 124 WDCHGLPIEVKAFESFKKDRSLLKPKDVRKVATDFAKKELKKQLDSFKAWGIVGDWD-NH 182
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T + Y +QL FY ++ + YIYR +KPV+WSPSS+TALA++ELEY HVSKSI+L
Sbjct: 183 YRTMEPGYEVSQLETFYEMFLKGYIYRGVKPVHWSPSSKTALADAELEYNEQHVSKSIFL 242
Query: 182 KIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK-GANVIVAK 239
K + +V + L L+A+IWTTTPW++PAN I N L+Y V + ++++
Sbjct: 243 KFAMKKVSSGLQRFDNGKLNAVIWTTTPWTIPANLAICVNAGLDYVVVEGRDNERYLISR 302
Query: 240 CLVESLKWTFQTDIEVVCD---FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
+ESL+ F+ + +V G L HP+ RD +L V + GTGL
Sbjct: 303 ERLESLREQFKLPLPIVEGAEAIKGADLFGTVTAHPMYG--RDSPILLGEHVVTGSGTGL 360
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP- 355
VH AP HG +DF + KI ++ + + G ++ G GL +LG G D V+ ++
Sbjct: 361 VHTAPGHGVEDFAICQQHKIEPISPVDDNGCFTEQVGR-FAGLEVLGAGNDAVIEELKSL 419
Query: 356 -DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
V+ +ENY H YPYDWRTKKP I++ ++QWF+D + ++L K++ NI
Sbjct: 420 NSVVHSENYVHKYPYDWRTKKPTIIRTTRQWFVDLSGV--QSLAVKSIENI 468
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 7/163 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ G GL +LG G D V+ ++ V+ +ENY H YPYDWRTKKP I+
Sbjct: 386 VDDNGCFTEQVGR-FAGLEVLGAGNDAVIEELKSLNSVVHSENYVHKYPYDWRTKKPTII 444
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+ ++QWF+D ++ A+ +E +N VP S L + +R WCISRQR WGVPIPVF
Sbjct: 445 RTTRQWFVDLSGVQSLAVKSIENINMVPPSGSNRLSSMVGKRNDWCISRQRYWGVPIPVF 504
Query: 1227 YD---GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
Y+ GD VN+ + H L +HG D W+S+ +LL +S
Sbjct: 505 YEKSSGDH-FVNQETMSHVLELFKKHGSDCWFSMETAELLPSS 546
>gi|317968656|ref|ZP_07970046.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0205]
Length = 984
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 342/653 (52%), Gaps = 67/653 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGAT----------DLHALIWTTT 464
TALAE+ELEY H S S++ ++P+ L LE A L IWTTT
Sbjct: 207 TALAEAELEYPDGHSSPSVFAAFPAVELPSELADTLEQAGLSPAQATAEGGLAVAIWTTT 266
Query: 465 PWSLPANQFIAFNPALEYSVASVKG---------ANVIVAKCLVENLKWTFQTDIDVVCD 515
PW+LPAN ++ N L+Y++ +++ ++++VA L E+L+ + + +
Sbjct: 267 PWTLPANLAVSVNERLDYAICAIEAQGDTPAPAASHLVVAAELRESLETSLGLSLKPLVS 326
Query: 516 FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPV 575
G L+ + Y HP+ E+ ++ ++++ GTGLVH AP HG DDF K+PV
Sbjct: 327 VKGSALEGLQYRHPL-LERTSPVVIGGDYITTEAGTGLVHTAPGHGVDDFNTGRKYKLPV 385
Query: 576 LNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 633
L + G + +AGP G N+L D ++ +E +L E Y+H YPYDWRTKKP
Sbjct: 386 LCPVDEAGNLTAEAGP-FAGTNVLKDANPTIISALEETGLLLKQERYEHRYPYDWRTKKP 444
Query: 634 VILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPI 693
I +A++QWF E + AL + +V ++P S + + +++R WCISRQR WGVPI
Sbjct: 445 TIFRATEQWFASVEGFRQAALDAIAQVEWLPASGRNRIEAMVSERGDWCISRQRTWGVPI 504
Query: 694 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDIL 749
PVFY +T +++NEA + H LI EHG D WW LL + S K D +
Sbjct: 505 PVFYHRETGEVLLNEATLSHIQGLIAEHGADVWWERDEAGLLPETYAAEASQWRKGTDTM 564
Query: 750 DIWFDSGISWSHVLKD------------KPAHVYMEGMDQINGWFMSSLLTSVALKHTAP 797
D+WFDSG SW+ VL PA +Y+EG DQ GWF SSLLTSVA+ AP
Sbjct: 565 DVWFDSGSSWAGVLGGIEGTSSRAPQLHYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAP 624
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
++ V HGF +DEKG KMSKS+GNV+ + G K K+
Sbjct: 625 YKRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVSGGKN--------------------QKQ 664
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS 917
P YG DVLR WV++ VP+G I+ D +K+R++ RYLLG LH+ S +
Sbjct: 665 EPPYGADVLRLWVSS-VDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPSKDA 723
Query: 918 ISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
I +D +ML+R +++ + +++ R + L NF V +LS Y + KDRL
Sbjct: 724 IPYEELPLLDQWMLQRTASLIDSVSGDFERYEFYRFFQALQNFCVVDLSNVYLDIAKDRL 783
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
Y N R S L + L +AP++ H+AE+++ +LP S F
Sbjct: 784 YVSGANDFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYSVAETSVF 836
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 242/410 (59%), Gaps = 31/410 (7%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NKILKDI ++ LLQGKR +VPGWDCHGLPIELK
Sbjct: 59 NTGPCFTLHDGPPYANGALHVGHALNKILKDIINKTALLQGKRARFVPGWDCHGLPIELK 118
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ +S+ L+P+ +RKKA +ALE + QKA F WG+ ADW+ Y T K+Y
Sbjct: 119 VLQGLKSSERAELTPVSLRKKAHAYALEQVEGQKAGFRRWGIWADWDQP-YLTLQKDYEA 177
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + +IYR LKPV+WSPSSRTALAE+ELEY H S S++ ++P+
Sbjct: 178 AQIGVFGAMVLAGHIYRGLKPVHWSPSSRTALAEAELEYPDGHSSPSVFAAFPAVELPSE 237
Query: 192 L---LEGA----------TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK------- 231
L LE A L IWTTTPW+LPAN ++ N L+Y++ +++
Sbjct: 238 LADTLEQAGLSPAQATAEGGLAVAIWTTTPWTLPANLAVSVNERLDYAICAIEAQGDTPA 297
Query: 232 --GANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 289
++++VA L ESL+ + ++ + G L+ + Y HP+ E+ ++ +++
Sbjct: 298 PAASHLVVAAELRESLETSLGLSLKPLVSVKGSALEGLQYRHPL-LERTSPVVIGGDYIT 356
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 349
+ GTGLVH AP HG DDF K+PVL + G + +AGP G N+L D +
Sbjct: 357 TEAGTGLVHTAPGHGVDDFNTGRKYKLPVLCPVDEAGNLTAEAGP-FAGTNVLKDANPTI 415
Query: 350 LHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +E +L E Y+H YPYDWRTKKP I +A++QWF E + AL
Sbjct: 416 ISALEETGLLLKQERYEHRYPYDWRTKKPTIFRATEQWFASVEGFRQAAL 465
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP G N+L + ++ +E +L E Y+H YPYDWRTKKP I
Sbjct: 389 VDEAGNLTAEAGP-FAGTNVLKDANPTIISALEETGLLLKQERYEHRYPYDWRTKKPTIF 447
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + AL + V ++P S + + +++R WCISRQR WGVPIPVF
Sbjct: 448 RATEQWFASVEGFRQAALDAIAQVEWLPASGRNRIEAMVSERGDWCISRQRTWGVPIPVF 507
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
Y +T +++NEA + H LI EHG D WW
Sbjct: 508 YHRETGEVLLNEATLSHIQGLIAEHGADVWW 538
>gi|449433407|ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
Length = 1093
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 355/645 (55%), Gaps = 70/645 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-NQVPAH---LLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY +L + P+ L E DL IWTTTPW++PAN
Sbjct: 293 TALAEAELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQEFLPDLCLAIWTTTPWTIPANAA 352
Query: 474 IAFNPALEYSV---------ASVKGAN----------------VIVAKCLVENLKWTFQT 508
+A N L Y++ SV N ++VA LV L+ +
Sbjct: 353 VAVNAKLHYAIIELLAPSEDVSVLTGNKKKRPGNILKEGKRPFLVVASDLVPTLEAKWGV 412
Query: 509 DIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 568
+ V G L++ +YIHPI+K++ + ++ ++++ GTGLVH AP HGQ+D+
Sbjct: 413 KLVVKKKLLGSELENCSYIHPIDKKECQV-VIGGDYITTETGTGLVHTAPGHGQEDYATG 471
Query: 569 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPY 626
L +P+++ + + GK++ +AG GL++LGDG V+ ++ ++ E+Y+H YPY
Sbjct: 472 LKYGLPIISPVDDDGKFTEEAGQ-FSGLDVLGDGNTAVVKYLDDHFSLILEESYEHKYPY 530
Query: 627 DWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQ 686
DWRTKKP I +A++QWF E + A+ + EV ++P A+ + + R WCISRQ
Sbjct: 531 DWRTKKPTIFRATEQWFASVEGFRQAAVDAIGEVKWIPPQAENRISAMTSSRSDWCISRQ 590
Query: 687 RVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNV 742
R WGVPIPVFY +T ++N+ I H ++I + G D WW ++V+ LL ++ S+
Sbjct: 591 RTWGVPIPVFYHVETKEPLMNDDTINHIKSIIAKKGSDAWWYMAVDVLLPDKYREIASDY 650
Query: 743 TKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAP 797
K D +D+WFDSG SW+ VL + PA +Y+EG DQ GWF SSLLT +A K AP
Sbjct: 651 EKGTDTMDVWFDSGSSWAAVLGTRDGFSFPADLYLEGTDQHRGWFQSSLLTCIATKGKAP 710
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
+ +V HGFV+DEKG KMSKS+GNV+ + +G K K+
Sbjct: 711 YASVVTHGFVLDEKGLKMSKSLGNVVDPKGVIEGGKN--------------------QKE 750
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS 917
P YG DVLR WV++ V IG +L D +K+R +LR+LLG LH+ +E
Sbjct: 751 APGYGADVLRLWVSS-VDYTGDVMIGSQVLRQMSDIYRKLRGTLRFLLGNLHDWTEENA- 808
Query: 918 ISRYVDVYMLKRLCEFQ-----NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
+Y D+ + + FQ N + Y +Q+ + +++ FV+ +LS FYF + KDR
Sbjct: 809 -VQYQDLPKIDQHALFQLENVINNIRESYESYQFFKIFQIIQRFVIVDLSNFYFDVAKDR 867
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
LY R S L + R +API+PHLAE+V+ +LP
Sbjct: 868 LYVGGSTSFTRRSCQTVLAAHVVSIARIIAPILPHLAEDVWQNLP 912
Score = 309 bits (791), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 178/417 (42%), Positives = 248/417 (59%), Gaps = 38/417 (9%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FILHDGPPYANG H+GHA+NKILKDI R LLQ +V +VPGWDCHGLPIELK
Sbjct: 145 NTGENFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVRFVPGWDCHGLPIELK 204
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S DK L+P+ +R KA FA T+ Q A F+ +GV ADW +N Y T EY
Sbjct: 205 VLQSLDKEARKDLTPIKLRDKAAKFAKATVKAQMASFKRYGVWADW-NNPYLTLSPEYEA 263
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL-NQVPA 190
Q+ F + Q YI+R KPV+WSPSSRTALAE+ELEY H S+SIY +L + P+
Sbjct: 264 AQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAIFRLVKEGPS 323
Query: 191 H---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV---------ASVKGAN---- 234
L E DL IWTTTPW++PAN +A N L Y++ SV N
Sbjct: 324 SGGVLQEFLPDLCLAIWTTTPWTIPANAAVAVNAKLHYAIIELLAPSEDVSVLTGNKKKR 383
Query: 235 ------------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKL 282
++VA LV +L+ + + V G L++ +YIHPI+K++ + +
Sbjct: 384 PGNILKEGKRPFLVVASDLVPTLEAKWGVKLVVKKKLLGSELENCSYIHPIDKKECQV-V 442
Query: 283 LPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNIL 342
+ ++++ GTGLVH AP HGQ+D+ L +P+++ + + GK++ +AG GL++L
Sbjct: 443 IGGDYITTETGTGLVHTAPGHGQEDYATGLKYGLPIISPVDDDGKFTEEAGQ-FSGLDVL 501
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
GDG V+ ++ ++ E+Y+H YPYDWRTKKP I +A++QWF E + A+
Sbjct: 502 GDGNTAVVKYLDDHFSLILEESYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAV 558
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ + GK++ +AG GL++LG+G V+ ++ ++ E+Y+H YPYDWRTKKP I
Sbjct: 482 VDDDGKFTEEAGQ-FSGLDVLGDGNTAVVKYLDDHFSLILEESYEHKYPYDWRTKKPTIF 540
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + A+ + V ++P A+ + + R WCISRQR WGVPIPVF
Sbjct: 541 RATEQWFASVEGFRQAAVDAIGEVKWIPPQAENRISAMTSSRSDWCISRQRTWGVPIPVF 600
Query: 1227 YDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +T ++N+ I H ++I + G D WW + V+ LL
Sbjct: 601 YHVETKEPLMNDDTINHIKSIIAKKGSDAWWYMAVDVLL 639
>gi|384253740|gb|EIE27214.1| isoleucyl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
Length = 1000
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/629 (34%), Positives = 339/629 (53%), Gaps = 42/629 (6%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQ 472
TALAE+ELEY H S+SIY+ + L + +P L E + IWTTT W++PAN+
Sbjct: 207 ATALAEAELEYPEGHTSRSIYVAMPLTSLGDAMPEDLKEKLSGAAVAIWTTTGWTIPANE 266
Query: 473 FIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+A N + Y S ++VA+ LV++L F + + G L Y HP+
Sbjct: 267 AVAVNERMNYGAESWAHRRLVVAEELVDSLGAKFGVQLQRLGSLTGGQLAGCQYRHPLF- 325
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
E+ L+ ++++ GTGLVH AP HGQ+D+ + L +P+ + + + G ++ +AGP
Sbjct: 326 ERTSPVLIGGDYITTESGTGLVHTAPGHGQEDYQVGLKNGLPISSPVDDDGVFTEEAGP- 384
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
+GL +L +G V+ ++ +L E Y H YPYDWRTK P I +A+ QWF+ E +
Sbjct: 385 FKGLPVLKEGTAAVIEALQQKGCLLKEERYAHKYPYDWRTKLPTIFRATDQWFVSVEGFQ 444
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A+ + V ++P S +K + + R WCISRQR WGVPIPV Y D ++ E
Sbjct: 445 AAAMDAVRSVQWIPASGEKRITSMVEGRSDWCISRQRSWGVPIPVLYYTDSGEPLMTEET 504
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
I+H +++ G D +W L +E LL + K + +D+WFDSG SW+ ++
Sbjct: 505 IEHMAAVVEAKGTDAFWQLPIEDLLPERLRTEAPKLRKQLETMDVWFDSGTSWAGCVEST 564
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLT+ A + +AP++ V HGF +DEKG KMSKS+GN
Sbjct: 565 PGLAFPADLYLEGSDQHRGWFQSSLLTAAAARGSAPYKAVLTHGFTLDEKGYKMSKSLGN 624
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
V+ I +G K K PA G DVLR WVA+ V
Sbjct: 625 VVDPRSIIEGGKD--------------------KNKEPALGADVLRLWVASVDYTGDMV- 663
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTM 937
+G ++++ D +K+R +LR++LG LH+ + ++ ++ D ++L + +
Sbjct: 664 MGPSVMSQVADVYRKLRFTLRFILGNLHDFAPASDAVPYDALPATDRFILSSFATLLSGL 723
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y +Q+ R + + FVV +LS +Y ++KDRLY + + R + LH++ L
Sbjct: 724 SASYETYQFFRVYQAVQRFVVADLSNWYLDVIKDRLYVSADDSFDRRAAQTVLHSLLQGL 783
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L +API+PHLAE+ + LP + S F
Sbjct: 784 LPALAPIVPHLAEDAWQALPWEAPSVSVF 812
Score = 316 bits (810), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 234/387 (60%), Gaps = 13/387 (3%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F LHDGPPYANG H+GHA+NKILK I + LL GK+ YVPGWDCHGLPIELK + S
Sbjct: 65 FTLHDGPPYANGDTHLGHALNKILKSIIVNYQLLGGKKARYVPGWDCHGLPIELKVLQSM 124
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + L P+ +R+KA++FAL+T+ Q+ +F+ +G+ DW+ Y T + +Y QL
Sbjct: 125 SDEQRRELDPIKLRRKARDFALKTVKAQREQFKRYGIWGDWDAP-YLTLEPKYEAAQLRV 183
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQVPAHL 192
F L +IYR KPV+WSPSS TALAE+ELEY H S+SIY+ + L + +P L
Sbjct: 184 FGKLVAAGHIYRGRKPVHWSPSSATALAEAELEYPEGHTSRSIYVAMPLTSLGDAMPEDL 243
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD 252
E + IWTTT W++PAN+ +A N + Y S ++VA+ LV+SL F
Sbjct: 244 KEKLSGAAVAIWTTTGWTIPANEAVAVNERMNYGAESWAHRRLVVAEELVDSLGAKFGVQ 303
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
++ + G L Y HP+ E+ L+ ++++ GTGLVH AP HGQ+D+ + L
Sbjct: 304 LQRLGSLTGGQLAGCQYRHPLF-ERTSPVLIGGDYITTESGTGLVHTAPGHGQEDYQVGL 362
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYD 370
+P+ + + + G ++ +AGP +GL +L +G V+ ++ +L E Y H YPYD
Sbjct: 363 KNGLPISSPVDDDGVFTEEAGP-FKGLPVLKEGTAAVIEALQQKGCLLKEERYAHKYPYD 421
Query: 371 WRTKKPVILKASQQWFIDTERIKPEAL 397
WRTK P I +A+ QWF+ E + A+
Sbjct: 422 WRTKLPTIFRATDQWFVSVEGFQAAAM 448
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AGP +GL +L EG V+ ++ +L E Y H YPYDWRTK P I
Sbjct: 372 VDDDGVFTEEAGP-FKGLPVLKEGTAAVIEALQQKGCLLKEERYAHKYPYDWRTKLPTIF 430
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ E + A+ + V ++P S +K + + R WCISRQR WGVPIPV
Sbjct: 431 RATDQWFVSVEGFQAAAMDAVRSVQWIPASGEKRITSMVEGRSDWCISRQRSWGVPIPVL 490
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D ++ E I+H +++ G D +W LP+E LL
Sbjct: 491 YYTDSGEPLMTEETIEHMAAVVEAKGTDAFWQLPIEDLL 529
>gi|86606359|ref|YP_475122.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
gi|86554901|gb|ABC99859.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
Length = 936
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/633 (37%), Positives = 340/633 (53%), Gaps = 47/633 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQV-PAH--LLEG-ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY +HIS SIY+ L + PA +LE L A IWTTTPW++PAN
Sbjct: 192 TALAEAELEYPDNHISPSIYVAFPLQSLSPAAQPILEPFLPGLRAAIWTTTPWTIPANLA 251
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ FNP L Y+V S + +++A L + L+ +T ++V PG L+ HP+
Sbjct: 252 LCFNPKLTYAVVESPRFGLLLIAADLRQRLEKVLETPLEVKATLPGSALEYCQGRHPLF- 310
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R + +V++ GTG+VH AP HG++DF +P+L+ + QG+++ +AG
Sbjct: 311 -DRSSLCVLGDYVTTESGTGIVHTAPGHGEEDFKTGQKYGLPILSPVDEQGRFTAEAGSQ 369
Query: 593 LEGLNILG-----DGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
GL++L G V+ + +L E Y H YPYDWRTK+P I +A++QWF
Sbjct: 370 FVGLDVLSKEPETSGNLAVIKALRAVGALLKEEPYNHKYPYDWRTKEPTIFRATEQWFAS 429
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
+ AL ++ V ++P + + + +R WCISRQR WGVPIPVFYD +T ++
Sbjct: 430 VAGFRELALQAIKTVKWIPPEGENRITAMVKERSDWCISRQRAWGVPIPVFYDEETGEVL 489
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSH 761
+ I H + + G D WW VE+LL T K D +D+WFDSG SW+
Sbjct: 490 LTAETIDHIKAIFAQEGSDAWWKRPVEELLPEQYRRHGRTYRKGTDTMDVWFDSGSSWAA 549
Query: 762 VLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
V + + P +Y+EG DQ GWF SSLLTSVA+ AP++ V HGFV+DEKG KMSK
Sbjct: 550 VARARGLGYPVDLYLEGSDQHRGWFQSSLLTSVAVNGQAPYKAVLTHGFVLDEKGQKMSK 609
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI + G + PAYG DVLR WV++
Sbjct: 610 SLGNVIDPLLLINGGSN--------------------PQTDPAYGADVLRLWVSS-VDYS 648
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
VPIGK IL D +KIR++ R+LL L++ + + ++ +D Y+L RL E
Sbjct: 649 GDVPIGKTILGQMADVYRKIRNTARFLLSNLYDFNPAQDAVPFEALTELDRYILHRLQEV 708
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + +Q+ R + + NF V +LS FY + KDRLY R L +
Sbjct: 709 GAEITESFENYQFYRFFQAVQNFCVVDLSNFYLDIGKDRLYISHARSLRRRQCQTVLSLV 768
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + +AP++ HLAEE++S+LP + T S F
Sbjct: 769 LENLAKAIAPVLSHLAEEIWSYLPYPKPTRSVF 801
Score = 309 bits (792), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/414 (42%), Positives = 247/414 (59%), Gaps = 21/414 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y E G P F+LHDGPPYANG H+G +NKILKDI + +LLQG++V YVPGW
Sbjct: 35 QIYQRLSENNPGDP-FVLHDGPPYANGDIHMGTTLNKILKDIINKYHLLQGRKVRYVPGW 93
Query: 66 DCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
DCHGLPIELK + S + + L+PL +R+KA+ +AL +N Q+A F+ GV DW+
Sbjct: 94 DCHGLPIELKVLQSLSPQERQSLTPLQLRQKAREYALHYVNVQRASFQRLGVWGDWDRP- 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY +H+S SIY+
Sbjct: 153 YLTLSPEYEAAQIEVFGQMALKGYIYRGLKPVHWSPSSQTALAEAELEYPDNHISPSIYV 212
Query: 182 KIKLNQV-PAH--LLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANVI 236
L + PA +LE L A IWTTTPW++PAN + FNP L Y+V S + ++
Sbjct: 213 AFPLQSLSPAAQPILEPFLPGLRAAIWTTTPWTIPANLALCFNPKLTYAVVESPRFGLLL 272
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
+A L + L+ +T +EV PG L+ HP+ R + +V++ GTG+
Sbjct: 273 IAADLRQRLEKVLETPLEVKATLPGSALEYCQGRHPLF--DRSSLCVLGDYVTTESGTGI 330
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG-----DGKDQVLH 351
VH AP HG++DF +P+L+ + QG+++ +AG GL++L G V+
Sbjct: 331 VHTAPGHGEEDFKTGQKYGLPILSPVDEQGRFTAEAGSQFVGLDVLSKEPETSGNLAVIK 390
Query: 352 LVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV 402
+ +L E Y H YPYDWRTK+P I +A++QWF + AL KTV
Sbjct: 391 ALRAVGALLKEEPYNHKYPYDWRTKEPTIFRATEQWFASVAGFRELALQAIKTV 444
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 9/167 (5%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGE-----GKDQVLHLVEP--DVLWTENYQHSYPYDW 1158
L+ + QG+++ +AG GL++L + G V+ + +L E Y H YPYDW
Sbjct: 353 LSPVDEQGRFTAEAGSQFVGLDVLSKEPETSGNLAVIKALRAVGALLKEEPYNHKYPYDW 412
Query: 1159 RTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRV 1218
RTK+P I +A++QWF + AL ++ V ++P + + + +R WCISRQR
Sbjct: 413 RTKEPTIFRATEQWFASVAGFRELALQAIKTVKWIPPEGENRITAMVKERSDWCISRQRA 472
Query: 1219 WGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WGVPIPVFYD +T +++ I H + + G D WW PVE+LL
Sbjct: 473 WGVPIPVFYDEETGEVLLTAETIDHIKAIFAQEGSDAWWKRPVEELL 519
>gi|307104070|gb|EFN52326.1| hypothetical protein CHLNCDRAFT_36907 [Chlorella variabilis]
Length = 1038
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/624 (36%), Positives = 326/624 (52%), Gaps = 52/624 (8%)
Query: 431 HISKSIYLKIKLNQV----PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS 486
H S SIY+ + L V P H IWTTTPW++PAN +A N L+Y+V
Sbjct: 267 HTSCSIYVAMPLQAVGPNAPEAAGAALEGAHFGIWTTTPWTIPANLAVAVNADLQYAVVE 326
Query: 487 VKG--------ANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLK 538
V+G +IVA L ++L F + +C G L+ +Y HP+ R
Sbjct: 327 VQGDLPEGWTVRRLIVAADLADSLAEKFGIALTTLCTVKGAELEGCSYRHPLF--DRTSP 384
Query: 539 LLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ G ++++ GTGLVH AP HGQ+D+ + +P+L+ + + G ++ +AGP GL
Sbjct: 385 VVAGGDYITTESGTGLVHTAPGHGQEDYQVGQKYGLPLLSPVDDAGVFTDEAGP-FAGLQ 443
Query: 598 ILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
+ GDG D V+ + +L E Y H YPYDWRTKKP I +A+ QWF E + AL
Sbjct: 444 VQGDGNDAVVKALAAAGVLLMEERYAHKYPYDWRTKKPTIFRATDQWFASVEGFRSAALE 503
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++ +++P + + + R WCISRQR WGVPIPVFY D ++ E I+H
Sbjct: 504 AIQGAHWIPAAGENRITAMTEGRSDWCISRQRKWGVPIPVFYYTDSGEPLLTEETIQHVT 563
Query: 714 TLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLK-----DK 766
++ EHG D WW + V LL + + K D +D+WFDSG SW+ VL +
Sbjct: 564 QVVAEHGSDAWWEMDVADLLPEHLRPEAGKLRKGEDTMDVWFDSGSSWAGVLGGDQALNY 623
Query: 767 PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAH 826
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+D+KG KMSKS+GNVI
Sbjct: 624 PADLYLEGSDQHRGWFQSSLLTSVAANGHAPYKQVLTHGFVLDDKGMKMSKSLGNVIDPR 683
Query: 827 DITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNI 886
+ G K AKK P YG DVLR WV++ V IG I
Sbjct: 684 VVMLGGKD--------------------AKKEPPYGADVLRLWVSS-VDYSSDVLIGGRI 722
Query: 887 LNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYG 942
+ D +K+R +LRYLLG L + + ++ D Y+L R + YG
Sbjct: 723 IGQVADVYRKMRFTLRYLLGNLADFEPAAHAVPHAQLAAADRYILARFAALVDECSAAYG 782
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVA 1002
+Q+ + + L F V +LS FY + KDRLY + R + L + +L +A
Sbjct: 783 SYQFYKVYQALQRFTVLDLSNFYLDVAKDRLYISAAAAPDRRACQTVLAALLEGMLPVIA 842
Query: 1003 PIMPHLAEEVYSHLPSRQGTFSSF 1026
P++PH+AE+ + +LP ++ S F
Sbjct: 843 PLLPHMAEDAWQNLPYKRQEQSVF 866
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 230/412 (55%), Gaps = 30/412 (7%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
S++Y Q N P F LHDGPPYANG HIGHA+NKILKDI R LLQG++ +VPG
Sbjct: 102 SKIYE-QLSRANPGPTFTLHDGPPYANGDLHIGHALNKILKDIINRYQLLQGRKAKFVPG 160
Query: 65 WDCHGLPIELKAITS-KD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WDCHGLPIELK + S KD + L+PL +RKKA FAL+T++ Q+ +F+ +GV ADW+
Sbjct: 161 WDCHGLPIELKVLQSMKDAERRSLTPLQLRKKAAEFALKTVDAQREQFKRYGVWADWDAP 220
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T + Y QL F + +IYR K + T+ + H S SIY
Sbjct: 221 -YVTLEPAYEAAQLRVFGQMVLNGHIYRCGKASAATDCMHTS------NTQKGHTSCSIY 273
Query: 181 LKIKLNQV----PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG---- 232
+ + L V P H IWTTTPW++PAN +A N L+Y+V V+G
Sbjct: 274 VAMPLQAVGPNAPEAAGAALEGAHFGIWTTTPWTIPANLAVAVNADLQYAVVEVQGDLPE 333
Query: 233 ----ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-F 287
+IVA L +SL F + +C G L+ +Y HP+ R ++ G +
Sbjct: 334 GWTVRRLIVAADLADSLAEKFGIALTTLCTVKGAELEGCSYRHPLF--DRTSPVVAGGDY 391
Query: 288 VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKD 347
+++ GTGLVH AP HGQ+D+ + +P+L+ + + G ++ +AGP GL + GDG D
Sbjct: 392 ITTESGTGLVHTAPGHGQEDYQVGQKYGLPLLSPVDDAGVFTDEAGP-FAGLQVQGDGND 450
Query: 348 QVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ + +L E Y H YPYDWRTKKP I +A+ QWF E + AL
Sbjct: 451 AVVKALAAAGVLLMEERYAHKYPYDWRTKKPTIFRATDQWFASVEGFRSAAL 502
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 5/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + + G ++ +AGP GL + G+G D V+ + +L E Y H YPYDWRTKKP
Sbjct: 423 LSPVDDAGVFTDEAGP-FAGLQVQGDGNDAVVKALAAAGVLLMEERYAHKYPYDWRTKKP 481
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A+ QWF E + AL ++G +++P + + + R WCISRQR WGVPI
Sbjct: 482 TIFRATDQWFASVEGFRSAALEAIQGAHWIPAAGENRITAMTEGRSDWCISRQRKWGVPI 541
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY D ++ E I+H ++ EHG D WW + V LL
Sbjct: 542 PVFYYTDSGEPLLTEETIQHVTQVVAEHGSDAWWEMDVADLL 583
>gi|303290709|ref|XP_003064641.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453667|gb|EEH50975.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 977
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/624 (36%), Positives = 329/624 (52%), Gaps = 74/624 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN------QVPAHLLEGATDLHALIWTTTPWSLPAN 471
TALAE+ELEY H+S S+Y+ +N PA E + +WTTTPW++PAN
Sbjct: 182 TALAEAELEYPEGHVSTSVYVAFPINADDEAANFPAEHREKLKNASLAVWTTTPWTMPAN 241
Query: 472 QFIAFNPALEYSV------------------ASVKGANVIVAKCLVENLKWTFQTDIDVV 513
+A N L YS+ A++ G +IVA LV ++ + + V
Sbjct: 242 AAVAVNDKLSYSLCEVTGVAATKEDAPSSDAAAMVGKTLIVATDLVSDVASRWGLTLAAV 301
Query: 514 CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI 573
D G L+ +TY HP + ++++ GTGLVH AP HGQ+D++ L +
Sbjct: 302 ADVAGAQLEGLTYAHPFYPADGE-------YITTESGTGLVHTAPGHGQEDYITGLKHGL 354
Query: 574 PVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTK 631
P+++ + + GK++ DAG L GL +L G + + ++ TE Y H YPYDWRTK
Sbjct: 355 PLISPVDDAGKFTEDAGDDLNGLAVLDAGNAACVEKLRDVGALIMTEAYGHKYPYDWRTK 414
Query: 632 KPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGV 691
KP I +A++QWF E + EAL L+ + F+P S K +R ++ R WCISRQR WGV
Sbjct: 415 KPTIFRATEQWFASVEGFRDEALKALDGIEFIPASGAKRMRPMVSGRNDWCISRQRSWGV 474
Query: 692 PIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSND 747
PIP FYD +T +++E IKH ++ E G D WW + + LL D ++ + D
Sbjct: 475 PIPCFYDVETREPLMDERTIKHVTEIVREKGTDAWWEMDLVDLLPEEYKDRADSLVRGTD 534
Query: 748 ILDIWFDSGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFL 803
+D+WFDSG SW+ V K + PA +Y+EG DQ GWF SSLLT VA AP++ +
Sbjct: 535 TMDVWFDSGSSWAGVCKARGLNYPADMYLEGSDQHRGWFQSSLLTGVAAAGQAPYKTILT 594
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGV 863
HGFV+DEKG KMSKS+GNVI + +G K K+ PA+G
Sbjct: 595 HGFVLDEKGYKMSKSLGNVIDPRLVIEGGKN--------------------QKQDPAFGA 634
Query: 864 DVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY 921
D LR WV AS D T V IG N+L + D +K+R +LR+L+G + + + + +Y
Sbjct: 635 DTLRLWV---ASTDYTSDVLIGMNVLKQTSDAYRKLRGTLRFLMGNIGDFAPEKDGV-KY 690
Query: 922 VDV-----YMLKRLCEFQNTMDTLYGEFQYARASRVL--LNFVVNELSAFYFTLVKDRLY 974
D+ Y L+R N M+ Y F Y+ A+ L + LS Y + KDRLY
Sbjct: 691 EDLPAFERYALRRTAAMVNEMERHYQNFAYSGATATLQARSSFTTFLSNVYLDVSKDRLY 750
Query: 975 CDSINGEARLSGLHTLHNIFHVLL 998
+S N R + + ++ LL
Sbjct: 751 IESPNSPERRACQTVVAHVVESLL 774
Score = 333 bits (854), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/420 (42%), Positives = 244/420 (58%), Gaps = 42/420 (10%)
Query: 11 QREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
RE NG+ F LHDGPPYANG HIGHA+NKILKD R L+GKRV +VPGWDCHGL
Sbjct: 27 SREGANGET-FTLHDGPPYANGDLHIGHALNKILKDFVCRYEALKGKRVRFVPGWDCHGL 85
Query: 71 PIELKAITSKDK----LLSPLDIRKKAKNFALETINTQKAE---FESWGVLADWEHNCYH 123
PIELK + S DK L+P+ +RKKA+NFAL+T++ Q+ + F+ +GV ADWE + Y
Sbjct: 86 PIELKVLQSMDKEKRAELTPIKLRKKARNFALKTVDAQREQARSFKRYGVWADWE-DPYL 144
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F ++ ++YR KPV+WSPSS TALAE+ELEY HVS S+Y+
Sbjct: 145 TLLPEYEGAQMEVFGQMFLNGHVYRGKKPVHWSPSSMTALAEAELEYPEGHVSTSVYVAF 204
Query: 184 KLN------QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV---------- 227
+N PA E + +WTTTPW++PAN +A N L YS+
Sbjct: 205 PINADDEAANFPAEHREKLKNASLAVWTTTPWTMPANAAVAVNDKLSYSLCEVTGVAATK 264
Query: 228 --------ASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRD 279
A++ G +IVA LV + + + V D G L+ +TY HP +
Sbjct: 265 EDAPSSDAAAMVGKTLIVATDLVSDVASRWGLTLAAVADVAGAQLEGLTYAHPFYPADGE 324
Query: 280 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 339
++++ GTGLVH AP HGQ+D++ L +P+++ + + GK++ DAG L GL
Sbjct: 325 -------YITTESGTGLVHTAPGHGQEDYITGLKHGLPLISPVDDAGKFTEDAGDDLNGL 377
Query: 340 NILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L G + + ++ TE Y H YPYDWRTKKP I +A++QWF E + EAL
Sbjct: 378 AVLDAGNAACVEKLRDVGALIMTEAYGHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAL 437
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 100/167 (59%), Gaps = 7/167 (4%)
Query: 1104 HHLNLIT---NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDW 1158
H L LI+ + GK++ DAG L GL +L G + + ++ TE Y H YPYDW
Sbjct: 352 HGLPLISPVDDAGKFTEDAGDDLNGLAVLDAGNAACVEKLRDVGALIMTEAYGHKYPYDW 411
Query: 1159 RTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRV 1218
RTKKP I +A++QWF E + EAL L+G+ F+P S K +R ++ R WCISRQR
Sbjct: 412 RTKKPTIFRATEQWFASVEGFRDEALKALDGIEFIPASGAKRMRPMVSGRNDWCISRQRS 471
Query: 1219 WGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WGVPIP FYD +T +++E IKH ++ E G D WW + + LL
Sbjct: 472 WGVPIPCFYDVETREPLMDERTIKHVTEIVREKGTDAWWEMDLVDLL 518
>gi|325190727|emb|CCA25221.1| isoleucyltRNA synthetase putative [Albugo laibachii Nc14]
Length = 963
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 236/632 (37%), Positives = 339/632 (53%), Gaps = 59/632 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA------TDLHALIWTTTPWSLPAN 471
TALAESELEY DH S++ Y+ L + + + + ++WTTTPW++P+N
Sbjct: 177 TALAESELEYF-DHTSQAAYILFPLVEAHSSAFKALLKQFQYEQVACVVWTTTPWTIPSN 235
Query: 472 QFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDI--DVVCDFPGQYLQDITYIHP 529
+ +P L YS+ + +++A+ LV++ + VV G L + P
Sbjct: 236 VALCVDPKLRYSLVKLHEKYLLMAEDLVDSFLDVLDRPLGSQVVATMRGSDLIASKFQQP 295
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK---IPVLNLITNQGKYS 586
+ K ++P V++ GTG+VH AP HGQ+D++ + + +L + G+++
Sbjct: 296 LGKNVS--VMIPGKHVTTDLGTGIVHIAPGHGQEDYIAWMEHQQGTSDILCPVNEDGRFT 353
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
+AGP LEGL +L +G +VL L+E ++ Y+H YPYDWRTKKPVIL+A+ QWF
Sbjct: 354 AEAGPELEGLEVLSEGNTKVLELLENHNQLVKVSPYKHRYPYDWRTKKPVILRATAQWFA 413
Query: 645 DTERIKPEALACLEE-VNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTI 702
E + AL CLE+ V P ++K+ L + R WCISRQR WG+PIPVFY
Sbjct: 414 KLEELHTIALQCLEKAVKTYPSNSKRRLEVTLRARNEWCISRQRAWGLPIPVFYHQSGQA 473
Query: 703 IVNEANIKHFCTLI------DEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFD 754
++N I HF L+ + G D WWSL VEQLL + ND LD+WFD
Sbjct: 474 LINSQTIAHFQELVLTYKSEGKEGSDCWWSLPVEQLLPPEYRHAAHEYVRGNDTLDVWFD 533
Query: 755 SGISWSHVL-----KDKP--AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFV 807
SG SW VL +P A VY+EG DQ GWF SSLLTSVA++ AP++N+ HGFV
Sbjct: 534 SGSSWYSVLAAGTPSKEPVCADVYLEGSDQHRGWFQSSLLTSVAVQRQAPYKNLITHGFV 593
Query: 808 VDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLR 867
+DE+G K SKS+GN + D G K QG +PAYG DV+R
Sbjct: 594 LDEQGRKQSKSLGNTVVPSDFIDGRSK------------------QG---MPAYGADVIR 632
Query: 868 WWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVD 923
+WVA V IG I+ + V+K+R++ R+LLG L + SI + +D
Sbjct: 633 YWVAT-TDYTSDVSIGPGIVQKVSEAVRKVRNTARFLLGNLADFHPEKDSIPYASMQSID 691
Query: 924 VYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEAR 983
YML L + + Y F + R ++L NF ++LSAFY KDRLYCD + R
Sbjct: 692 KYMLHVLDQVNTSCTAAYDSFAFQRVQQILTNFTASDLSAFYMEACKDRLYCDPAASQRR 751
Query: 984 LSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
S LH+ L ++AP++ H AE+++ H
Sbjct: 752 RSCQTVLHHTLRSLTWSIAPVLCHTAEDIWMH 783
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/414 (42%), Positives = 245/414 (59%), Gaps = 18/414 (4%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+C L + R +P F+LHDGPP+ANG+ H+GH +NKILKDI LR L++G RV
Sbjct: 15 KCVQQVLQHFARPDAQNRPRFLLHDGPPFANGSLHMGHFLNKILKDIILRYKLMRGYRVE 74
Query: 61 YVPGWDCHGLPIELKAI--TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
YVPGWDCHGLPIELKA+ K K L PL IR+ ++ ALE I QK +F WGVLADWE
Sbjct: 75 YVPGWDCHGLPIELKALEQAKKGKELCPLHIRQTSRKLALEAIKKQKKDFRRWGVLADWE 134
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
+ Y T D +Y Q + QD IYR KPVYWSPSS+TALAESELEY DH S++
Sbjct: 135 SHTYTTMDPQYEVRQYDILKEMLMQDRIYRGFKPVYWSPSSKTALAESELEYF-DHTSQA 193
Query: 179 IYLKIKLNQVPAHLLEGA------TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG 232
Y+ L + + + + ++WTTTPW++P+N + +P L YS+ +
Sbjct: 194 AYILFPLVEAHSSAFKALLKQFQYEQVACVVWTTTPWTIPSNVALCVDPKLRYSLVKLHE 253
Query: 233 ANVIVAKCLVESLKWTFQTDI--EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSS 290
+++A+ LV+S + +VV G L + P+ K ++P V++
Sbjct: 254 KYLLMAEDLVDSFLDVLDRPLGSQVVATMRGSDLIASKFQQPLGKNVS--VMIPGKHVTT 311
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEK---IPVLNLITNQGKYSPDAGPGLEGLNILGDGKD 347
GTG+VH AP HGQ+D++ + + +L + G+++ +AGP LEGL +L +G
Sbjct: 312 DLGTGIVHIAPGHGQEDYIAWMEHQQGTSDILCPVNEDGRFTAEAGPELEGLEVLSEGNT 371
Query: 348 QVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+VL L+E ++ Y+H YPYDWRTKKPVIL+A+ QWF E + AL C
Sbjct: 372 KVLELLENHNQLVKVSPYKHRYPYDWRTKKPVILRATAQWFAKLEELHTIALQC 425
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 110/196 (56%), Gaps = 19/196 (9%)
Query: 1078 HLAEEVYSHLPSRQGTFSSFCHFKVYHHLNLITNQGKYSPDAGPGLEGLNILGEGKDQVL 1137
H E+ + + +QGT C + G+++ +AGP LEGL +L EG +VL
Sbjct: 324 HGQEDYIAWMEHQQGTSDILCP---------VNEDGRFTAEAGPELEGLEVLSEGNTKVL 374
Query: 1138 HLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLE-GVNFVP 1194
L+E ++ Y+H YPYDWRTKKPVIL+A+ QWF E + AL CLE V P
Sbjct: 375 ELLENHNQLVKVSPYKHRYPYDWRTKKPVILRATAQWFAKLEELHTIALQCLEKAVKTYP 434
Query: 1195 ESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLI------D 1247
++K+ L + R WCISRQR WG+PIPVFY ++N I HF L+
Sbjct: 435 SNSKRRLEVTLRARNEWCISRQRAWGLPIPVFYHQSGQALINSQTIAHFQELVLTYKSEG 494
Query: 1248 EHGPDFWWSLPVEQLL 1263
+ G D WWSLPVEQLL
Sbjct: 495 KEGSDCWWSLPVEQLL 510
>gi|159902802|ref|YP_001550146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
gi|254782425|sp|A9BDK6.1|SYI_PROM4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|159887978|gb|ABX08192.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 969
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/641 (35%), Positives = 341/641 (53%), Gaps = 55/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---------------LEGATDLHALIWT 462
TALAE+ELEY H S S+Y+ + +P L +E + L IWT
Sbjct: 204 TALAEAELEYPEAHTSPSVYVAFSVIHLPQSLSENLIKQGLELPGDEVELSKRLKVCIWT 263
Query: 463 TTPWSLPANQFIAFNPALEYSVA--SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQY 520
TTPW+LPAN ++ N L+YS KG +I A L+E + V + G+
Sbjct: 264 TTPWTLPANAAVSVNSNLDYSFVRHEEKGQILIFATELLEEVSEILGISFKQVANAKGES 323
Query: 521 LQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLIT 580
L+ I Y HP+ + + +L ++++ GTGLVH AP HG DDF L + V +
Sbjct: 324 LKGILYKHPLYERTAPI-VLGGSYITTQSGTGLVHTAPGHGIDDFKTGLQNNLEVFCPVD 382
Query: 581 NQGKYSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKA 638
+G ++ +AG EGLN+L D +++ +E +L Y H YPYDWRTKKP I +A
Sbjct: 383 EKGIFTSEAGK-FEGLNVLKDANKEIISSLEISGSLLKELPYVHKYPYDWRTKKPTIFRA 441
Query: 639 SQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD 698
++QWF E + +AL +++V ++PES + ++ + +R WCISRQR WG+PIPVFY
Sbjct: 442 TEQWFASVEGFREDALKAIDDVEWLPESGRNRIQSMVRERGDWCISRQRTWGIPIPVFYK 501
Query: 699 GDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN--VTKSNDILDIWFD 754
+T I++N+ I H L ++G D WW +LL S + + K D +D+WFD
Sbjct: 502 KNTNEILLNKETIDHIENLFAQYGADIWWEFDESKLLPPSLASESHHWQKGVDTMDVWFD 561
Query: 755 SGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVD 809
SG SW+ V + PA +Y+EG DQ GWF SSLLTSVA+ AP++ V HGF +D
Sbjct: 562 SGSSWASVSCQRDELGYPADLYLEGTDQHRGWFQSSLLTSVAVNGHAPYKKVLTHGFALD 621
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
E G KMSKS+GN+I I G K PAYG DVLR W
Sbjct: 622 ENGRKMSKSLGNIIDPTVIINGGTN--------------------KKTDPAYGADVLRLW 661
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVY 925
V++ VPIG NIL D +K+R++ RYLLG LH+ S+ +D +
Sbjct: 662 VSS-VDYSVDVPIGSNILKQLSDVYRKVRNTSRYLLGNLHDFDPKKNSVDIDNLPILDKW 720
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
ML R E + + + +++++R ++L +F +LS FY + KDRLY + + R +
Sbjct: 721 MLNRTAEVIDEITLAFEKYEFSRFFQLLQSFCTVDLSNFYLDIAKDRLYVSAPDDPRRRA 780
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ I L ++P++ H+AE+++ ++P + S F
Sbjct: 781 CQTVMALIIEKLAGLISPVLCHMAEDIWQNIPYQLSEESVF 821
Score = 310 bits (794), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/405 (40%), Positives = 236/405 (58%), Gaps = 26/405 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N P F LHDGPPYANG H+GHA+NK+LKDI + ++++G +VH+VPGWDCHGLPIELK
Sbjct: 56 NKGPSFTLHDGPPYANGALHMGHALNKVLKDIINKFHIMRGHKVHFVPGWDCHGLPIELK 115
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + + + L+P+ +RKKA +A + + Q F+ WG+ +W + Y T KEY
Sbjct: 116 VLQTLSNKERQALTPIQLRKKAAAYASKQVKGQMEGFKRWGIWGNW-NKPYLTLQKEYES 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSSRTALAE+ELEY H S S+Y+ + +P
Sbjct: 175 AQVKLFGQMVLKGYIYRGLKPVHWSPSSRTALAEAELEYPEAHTSPSVYVAFSVIHLPQS 234
Query: 192 L---------------LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA--SVKGAN 234
L +E + L IWTTTPW+LPAN ++ N L+YS KG
Sbjct: 235 LSENLIKQGLELPGDEVELSKRLKVCIWTTTPWTLPANAAVSVNSNLDYSFVRHEEKGQI 294
Query: 235 VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGT 294
+I A L+E + + V + G+ L+ I Y HP+ + + +L ++++ GT
Sbjct: 295 LIFATELLEEVSEILGISFKQVANAKGESLKGILYKHPLYERTAPI-VLGGSYITTQSGT 353
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
GLVH AP HG DDF L + V + +G ++ +AG EGLN+L D +++ +E
Sbjct: 354 GLVHTAPGHGIDDFKTGLQNNLEVFCPVDEKGIFTSEAGK-FEGLNVLKDANKEIISSLE 412
Query: 355 --PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L Y H YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 413 ISGSLLKELPYVHKYPYDWRTKKPTIFRATEQWFASVEGFREDAL 457
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVIL 1166
+ +G ++ +AG EGLN+L + +++ +E +L Y H YPYDWRTKKP I
Sbjct: 381 VDEKGIFTSEAGK-FEGLNVLKDANKEIISSLEISGSLLKELPYVHKYPYDWRTKKPTIF 439
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL ++ V ++PES + ++ + +R WCISRQR WG+PIPVF
Sbjct: 440 RATEQWFASVEGFREDALKAIDDVEWLPESGRNRIQSMVRERGDWCISRQRTWGIPIPVF 499
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +T I++N+ I H L ++G D WW +LL
Sbjct: 500 YKKNTNEILLNKETIDHIENLFAQYGADIWWEFDESKLL 538
>gi|126695598|ref|YP_001090484.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
gi|166229753|sp|A3PAV8.1|SYI_PROM0 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|126542641|gb|ABO16883.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 968
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/630 (35%), Positives = 344/630 (54%), Gaps = 54/630 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLP---- 469
TALAE+ELEY DH SKSIY+ +K+ ++P + ++ ++ + +
Sbjct: 204 TALAEAELEYPDDHYSKSIYVSLKITKIPEEIQLNFIQKNINIKKDFFQNNSFITIWTTT 263
Query: 470 -----ANQFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
AN+ +A NP + Y A + + + AK L + F D V+ + G L++
Sbjct: 264 PWTIPANEAVAVNPKINYIFAIDEEKRIYLFAKDLCSEISKKFNKDFKVLLEVKGSKLEN 323
Query: 524 ITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
I Y HP + ++ +++ G ++++ GTG+VH AP HG DDF + +P+ ++ +
Sbjct: 324 IEYQHP--SKNKNCRIVIGGDYITTESGTGIVHTAPGHGIDDFNVGQKYDLPITCVVDEK 381
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQ 640
G + +G +G N+L D D ++ ++ + +L ENY+H YPYDWRTKKP I +A++
Sbjct: 382 GNLNEYSGQ-FKGSNVLKDANDLIIEYLKVNNLLLLQENYKHRYPYDWRTKKPTIFRATE 440
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--D 698
QWF + AL +E+V ++PE+ KK + + R WCISRQR WGVPIPVFY +
Sbjct: 441 QWFASVNGFRSSALKAIEDVEWMPETGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYKKN 500
Query: 699 GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSG 756
G+ I++N+ I H L EHG D WW V+ LL N + + K D +D+WFDSG
Sbjct: 501 GNEILLNKEIINHIQELFSEHGADIWWDWDVKNLLPENYAKESDLWKKGKDTMDVWFDSG 560
Query: 757 ISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
SW+ V + + PA +Y+EG DQ GWF SSLLTSVA+ + P++ V HGF +DE
Sbjct: 561 SSWAAVCELRSELKYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKKVLTHGFALDEN 620
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA 871
G KMSKS+GNV+ + I G K PAYG DVLR WV+
Sbjct: 621 GRKMSKSLGNVVDPNIIINGG--------------------NNKKTDPAYGADVLRLWVS 660
Query: 872 AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYML 927
+ VPIG NIL D +K+R++ RYLLG +H++ S +D +ML
Sbjct: 661 S-VDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPKIDSFEIDQLPLLDQWML 719
Query: 928 KRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGL 987
RL E + + Y +++++ ++L +F V +LS FY + KDRLY S + R S
Sbjct: 720 GRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYVSSKSQFRRRSCQ 779
Query: 988 HTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ + L ++P++ H+AE+++ ++P
Sbjct: 780 FVMSKVVENLAVLISPVLCHMAEDIWQNIP 809
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 238/398 (59%), Gaps = 25/398 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
F LHDGPPYANG H+GHA+NK+LKDI + L+G RVH+VPGWDCHGLPIELK +
Sbjct: 61 FTLHDGPPYANGALHMGHALNKVLKDIINKYKTLKGFRVHFVPGWDCHGLPIELKVLQNL 120
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + K L L++RKKA ++A IN QK F+ WG+ DW +N Y T K Y Q+
Sbjct: 121 KSDERKNLDTLNLRKKATDYAHIQINNQKEGFKRWGIWGDW-NNPYLTLKKSYESAQIGV 179
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL---- 192
F ++ YIYR LKPV+WSPSSRTALAE+ELEY DH SKSIY+ +K+ ++P +
Sbjct: 180 FGKMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDDHYSKSIYVSLKITKIPEEIQLNF 239
Query: 193 LEGATDLHALIWTTTPW---------SLPANQFIAFNPALEYSVASVKGANV-IVAKCLV 242
++ ++ + + ++PAN+ +A NP + Y A + + + AK L
Sbjct: 240 IQKNINIKKDFFQNNSFITIWTTTPWTIPANEAVAVNPKINYIFAIDEEKRIYLFAKDLC 299
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAP 301
+ F D +V+ + G L++I Y HP + ++ +++ G ++++ GTG+VH AP
Sbjct: 300 SEISKKFNKDFKVLLEVKGSKLENIEYQHP--SKNKNCRIVIGGDYITTESGTGIVHTAP 357
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG DDF + +P+ ++ +G + +G +G N+L D D ++ ++ + +L
Sbjct: 358 GHGIDDFNVGQKYDLPITCVVDEKGNLNEYSGQ-FKGSNVLKDANDLIIEYLKVNNLLLL 416
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
ENY+H YPYDWRTKKP I +A++QWF + AL
Sbjct: 417 QENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSAL 454
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Query: 1123 LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
+G N+L + D ++ ++ + +L ENY+H YPYDWRTKKP I +A++QWF +
Sbjct: 391 FKGSNVLKDANDLIIEYLKVNNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFR 450
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 1238
AL +E V ++PE+ KK + + R WCISRQR WGVPIPVFY +G+ I++N+
Sbjct: 451 SSALKAIEDVEWMPETGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYKKNGNEILLNKEI 510
Query: 1239 IKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L EHG D WW V+ LL
Sbjct: 511 INHIQELFSEHGADIWWDWDVKNLL 535
>gi|358390917|gb|EHK40322.1| hypothetical protein TRIATDRAFT_132344 [Trichoderma atroviride IMI
206040]
Length = 960
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 253/723 (34%), Positives = 375/723 (51%), Gaps = 71/723 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ---VPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY+ DH+S + Y+K + A L E L+A IWTTTPW+LPAN+ I
Sbjct: 204 TALAEAELEYRDDHVSTAAYVKFPIMSDWSSIAGLNEFKGQLYAAIWTTTPWTLPANKAI 263
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
A + LEY++ ++VA+ +E ++ + + V PG L+ + Y + +
Sbjct: 264 AVHDELEYALLQAGNDGLLVAESRIEEVQKNIPSAVLVAKSIPGSQLKGLQYRNKLRGAS 323
Query: 535 RDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG- 592
L+ ++ A FVS+ GTGLVH AP HGQ+D+ + A I IT++G ++P+A P
Sbjct: 324 STLQPIVHADFVSADSGTGLVHMAPGHGQEDYQVCSALNIEAFAPITDEGYFTPEAYPDD 383
Query: 593 ----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
+IL G VL+LV DVLWT QH YPYDWRTKKPV+++A+ QWF D
Sbjct: 384 PEKLTSAPSILDGGSQAVLNLVGQDVLWTHKLQHKYPYDWRTKKPVVIRATAQWFADVGS 443
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNE 706
IK +AL L +V FVPES K L + R WCISRQR WGVPIP YD G ++ +E
Sbjct: 444 IKEDALQALSKVRFVPESGKVRLESFVKGRSEWCISRQRSWGVPIPALYDETGSAVMTDE 503
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTS-DVNSNVTKSNDILDIWFDSGISWSHVLKD 765
+I+H +++++ D W+S S + + + + D +D+WFDSG SW+ +
Sbjct: 504 -SIEHIISVMEQKTSDAWFSDSADDATWIAPSLKGKYRRGTDTMDVWFDSGSSWTEI--G 560
Query: 766 KPAHVYMEGMDQINGWFMSSLLTSVALKH---------TAPFRNVFLHGFVVDEKGAKMS 816
+P VY+EG DQ GWF SSLLT VA + APF + HGF +D +G KMS
Sbjct: 561 RPVDVYLEGSDQHRGWFQSSLLTFVAAQTADGKSGADIAAPFGTLVTHGFTLDAQGKKMS 620
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN I +I +G K LP + + ++ +D A G D LR W AA +
Sbjct: 621 KSLGNTIGPSEIMEG-KLLPPLKNKGHDTVARYD---------ALGTDALRLW-AASSDF 669
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNT 936
+ +G +IL + K R++L+ LLG LH S +++ + +L + Q+
Sbjct: 670 TSDILVGGSILQPIHSALIKYRTTLKMLLGSLH-QSALQAPLTKLDQIAIL----QLQDV 724
Query: 937 MDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
M + YG +++ +A+ ++ ++ +LSAFY +KDRLYC G L I
Sbjct: 725 MAQVWEAYGNYEFHKATGLINRWIATDLSAFYLEALKDRLYCGDGGG--------VLVPI 776
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGEA 1053
LR ++PI P L EE +SH P+ SF + R LY + A
Sbjct: 777 LVGFLRMLSPITPMLVEEAWSHRPTWMAGDLSFEN-----------PARQLYNSRVIDPA 825
Query: 1054 RLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYHHLNLITNQG 1113
RL+ + LR PI+ + + V + L QG S + +N+ N
Sbjct: 826 RLT-------MDQAQLRLDLPILSAVHDAVKAGL--EQGRESKALGSSLQCSVNISVNDD 876
Query: 1114 KYS 1116
+ +
Sbjct: 877 RLA 879
Score = 329 bits (843), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 178/401 (44%), Positives = 242/401 (60%), Gaps = 11/401 (2%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
Y WQ + + F+LHDGPPYANG H GHA+NKILKD+ R + G+RV Y P WD
Sbjct: 50 FYKWQTDNRPKENPFVLHDGPPYANGPLHAGHAINKILKDMINRIQVQGGRRVMYRPSWD 109
Query: 67 CHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTF 125
CHGLPIE+KA+ S K LSP IR+ A+ A +TI Q F+S+ V ++W+ N + T
Sbjct: 110 CHGLPIEMKALGESGTKGLSPPKIRESARRLASKTILDQMKGFQSFAVASEWD-NKWTTM 168
Query: 126 DKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL 185
D+ + QL F + + IYR KPVYWS SSRTALAE+ELEY+ DHVS + Y+K +
Sbjct: 169 DRAFEIRQLRVFQKMVRSGLIYRKHKPVYWSISSRTALAEAELEYRDDHVSTAAYVKFPI 228
Query: 186 N---QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
A L E L+A IWTTTPW+LPAN+ IA + LEY++ ++VA+ +
Sbjct: 229 MSDWSSIAGLNEFKGQLYAAIWTTTPWTLPANKAIAVHDELEYALLQAGNDGLLVAESRI 288
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCAP 301
E ++ + + V PG L+ + Y + + L+ ++ A FVS+ GTGLVH AP
Sbjct: 289 EEVQKNIPSAVLVAKSIPGSQLKGLQYRNKLRGASSTLQPIVHADFVSADSGTGLVHMAP 348
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLVEPD 356
HGQ+D+ + A I IT++G ++P+A P +IL G VL+LV D
Sbjct: 349 GHGQEDYQVCSALNIEAFAPITDEGYFTPEAYPDDPEKLTSAPSILDGGSQAVLNLVGQD 408
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VLWT QH YPYDWRTKKPV+++A+ QWF D IK +AL
Sbjct: 409 VLWTHKLQHKYPYDWRTKKPVVIRATAQWFADVGSIKEDAL 449
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 102/169 (60%), Gaps = 13/169 (7%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLVEPDVLWTEN 1149
++V LN+ IT++G ++P+A P +IL G VL+LV DVLWT
Sbjct: 355 YQVCSALNIEAFAPITDEGYFTPEAYPDDPEKLTSAPSILDGGSQAVLNLVGQDVLWTHK 414
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
QH YPYDWRTKKPV+++A+ QWF D IK +AL L V FVPES K L + R
Sbjct: 415 LQHKYPYDWRTKKPVVIRATAQWFADVGSIKEDALQALSKVRFVPESGKVRLESFVKGRS 474
Query: 1210 YWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
WCISRQR WGVPIP YD G ++ +E +I+H +++++ D W+S
Sbjct: 475 EWCISRQRSWGVPIPALYDETGSAVMTDE-SIEHIISVMEQKTSDAWFS 522
>gi|318042707|ref|ZP_07974663.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0101]
Length = 977
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/654 (36%), Positives = 344/654 (52%), Gaps = 69/654 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE-------------GATDLHALIWTTT 464
TALAE+ELEY H S S+Y ++PA L E L IWTTT
Sbjct: 200 TALAEAELEYPDGHTSPSVYAAFPAVELPAALAEQLNAAGLSADAATATGGLAVAIWTTT 259
Query: 465 PWSLPANQFIAFNPALEYSVASV--KGAN-------VIVAKCLVENLKWTFQTDIDVVCD 515
PW+LPAN ++ N L+Y++ +V +G N ++VA L E+L+ + + +
Sbjct: 260 PWTLPANLAVSVNERLDYAICAVAPQGDNAAPAVSHLVVAAELRESLETSLGLALTPLLS 319
Query: 516 FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPV 575
G L+ I Y HP+ E+ ++ ++++ GTGLVH AP HG DDF +PV
Sbjct: 320 VKGAALEGIVYRHPL-LERTSQVVIGGDYITTEAGTGLVHTAPGHGVDDFNTGKKYGLPV 378
Query: 576 LNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 633
L + G + +AGP G N+L D +L +E +L E Y+H YPYDWRTKKP
Sbjct: 379 LCPVDEAGNLTAEAGP-FAGTNVLKDANPTILEALEGTGLLLKQERYEHRYPYDWRTKKP 437
Query: 634 VILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPI 693
I +A++QWF E + AL + +V+++P S + + +++R WCISRQR WGVPI
Sbjct: 438 TIFRATEQWFASVEGFRAAALEAIAQVDWLPASGRNRIEAMVSERGDWCISRQRTWGVPI 497
Query: 694 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLN---TSDVNSNVTKSNDI 748
PVFY +T +++N+A + H LI EHG D WW LL +D + K D
Sbjct: 498 PVFYHRETGEVLLNQATLDHIQALIAEHGADVWWERDEAGLLPEPYAADA-AQWRKGTDT 556
Query: 749 LDIWFDSGISWSHVLKD------------KPAHVYMEGMDQINGWFMSSLLTSVALKHTA 796
+D+WFDSG SW+ VL PA +Y+EG DQ GWF SSLLTSVA+ A
Sbjct: 557 MDVWFDSGSSWAGVLGGIAGGESRAPELHYPADLYLEGSDQHRGWFQSSLLTSVAVNGHA 616
Query: 797 PFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAK 856
P++ V HGF +DEKG KMSKS+GNV+ + +G K K
Sbjct: 617 PYKRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGKN--------------------EK 656
Query: 857 KLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
+ PAYG DVLR WV++ VP+G I+ D +K+R++ RYLLG LH+ + +T
Sbjct: 657 QEPAYGADVLRLWVSS-VDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFNPATD 715
Query: 917 SISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
++ +D +ML+R +++ + F++ R + L NF V +LS Y + KDR
Sbjct: 716 AVPYAELPLLDQWMLQRTAALIDSVSGDFERFEFYRFFQALQNFCVVDLSNVYLDIAKDR 775
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
LY R S L + L +AP++ H+AE+++ +LP S F
Sbjct: 776 LYVSGAADFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYSVAERSVF 829
Score = 322 bits (826), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 243/423 (57%), Gaps = 32/423 (7%)
Query: 4 FSELYSWQR-EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
++EL ++R N F LHDGPPYANG H+GHA+NKILKDI ++ LLQGKR ++
Sbjct: 39 WAELQLYERLSQQNPGESFTLHDGPPYANGALHVGHALNKILKDIINKTALLQGKRARFI 98
Query: 63 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIELK + +S+ L+P+ +R+KA +ALE + QKA F WG+ ADW+
Sbjct: 99 PGWDCHGLPIELKVLQGLKSSERAELTPVSLRQKAHAYALEQVEGQKAGFRRWGIWADWD 158
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
Y T K Y Q+ F + +IYR LKPV+WSPSSRTALAE+ELEY H S S
Sbjct: 159 QP-YLTLQKSYEAAQIGVFGAMVLAGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPS 217
Query: 179 IYLKIKLNQVPAHLLE-------------GATDLHALIWTTTPWSLPANQFIAFNPALEY 225
+Y ++PA L E L IWTTTPW+LPAN ++ N L+Y
Sbjct: 218 VYAAFPAVELPAALAEQLNAAGLSADAATATGGLAVAIWTTTPWTLPANLAVSVNERLDY 277
Query: 226 SVASV--KGAN-------VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE 276
++ +V +G N ++VA L ESL+ + + + G L+ I Y HP+ E
Sbjct: 278 AICAVAPQGDNAAPAVSHLVVAAELRESLETSLGLALTPLLSVKGAALEGIVYRHPL-LE 336
Query: 277 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 336
+ ++ ++++ GTGLVH AP HG DDF +PVL + G + +AGP
Sbjct: 337 RTSQVVIGGDYITTEAGTGLVHTAPGHGVDDFNTGKKYGLPVLCPVDEAGNLTAEAGP-F 395
Query: 337 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 394
G N+L D +L +E +L E Y+H YPYDWRTKKP I +A++QWF E +
Sbjct: 396 AGTNVLKDANPTILEALEGTGLLLKQERYEHRYPYDWRTKKPTIFRATEQWFASVEGFRA 455
Query: 395 EAL 397
AL
Sbjct: 456 AAL 458
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ G + +AGP G N+L + +L +E +L E Y+H YPYDWRTKKP I
Sbjct: 382 VDEAGNLTAEAGP-FAGTNVLKDANPTILEALEGTGLLLKQERYEHRYPYDWRTKKPTIF 440
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + AL + V+++P S + + +++R WCISRQR WGVPIPVF
Sbjct: 441 RATEQWFASVEGFRAAALEAIAQVDWLPASGRNRIEAMVSERGDWCISRQRTWGVPIPVF 500
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
Y +T +++N+A + H LI EHG D WW
Sbjct: 501 YHRETGEVLLNQATLDHIQALIAEHGADVWW 531
>gi|340377797|ref|XP_003387415.1| PREDICTED: isoleucyl-tRNA synthetase-like [Amphimedon queenslandica]
Length = 934
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/624 (36%), Positives = 355/624 (56%), Gaps = 52/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEYK DH+S S+Y+K ++ P +LEG + +L+WTTTPW+LP N+ I +N
Sbjct: 188 TALAEAELEYK-DHVSPSVYVKFP-SKFP-QILEGKL-VQSLVWTTTPWTLPGNRAICYN 243
Query: 478 PALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE- 533
A +YSV + ++ +I + L E F D V+ FPG L+ Y +P+ +
Sbjct: 244 HAHQYSVIKAESSSELFLIGSDVLNEKGSELF-GDYSVIDTFPGHSLEGGAYHNPLTNQL 302
Query: 534 ----QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
+ L LP+ VSS +GTGLVH APAHG DD+ + + + +L+ +G Y
Sbjct: 303 MIANEGTLPFLPSSHVSSKEGTGLVHTAPAHGFDDYTVGKRHSLDLTSLVNERGCYDDWV 362
Query: 590 GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G L GL++ G ++++ L+ + +L Y+H YPYDWRTK+PV++++++QWF E
Sbjct: 363 GGDLSGLDVFKSGNEKIISLLRANESLLHHSQYKHRYPYDWRTKEPVLIRSTKQWFASLE 422
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGDTIIV 704
++ +A+ L++V +P S+ K + D + P WCISRQRVWG+P+PVFY + D ++
Sbjct: 423 TLRDKAIKALDDVKGIPPSSVKRVTDMVESSPEWCISRQRVWGLPLPVFYPLDNPDGYLI 482
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--NVTKSNDILDIWFDSGISWSHV 762
I+H L +H D WW+L + +LL S + K +D LDIWFDSG SW+ V
Sbjct: 483 TADTIQHIKKLFLKHSSDSWWTLPLTELLPPSLTKEAESYEKGSDTLDIWFDSGSSWATV 542
Query: 763 LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
++ A +Y+EG DQ GWF SSLLTSVA+ T+P++ + HGF++D +G KMSKS+GNV
Sbjct: 543 VEGGVADMYLEGHDQYRGWFQSSLLTSVAVNKTSPYKQLVCHGFMLDGRGIKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ DIT KKL G D LR +A + +
Sbjct: 603 VDPVDITD-EKKL--------------------------GADGLRLLIAL-CDFTSDISL 634
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTMD 938
++ ++ + KIR+++R+++G L + I ++ YML L E+ +++
Sbjct: 635 TSTLIEQVREFLLKIRTTIRFMIGNLSSFDPRRDLIPYSSLPPLERYMLHVLSEYFESVE 694
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+LY E Y + ++ + + ++LS FY+ ++KD LYCD R S L LH +
Sbjct: 695 SLYEELNYCKICHLIDDLIRSDLSPFYYDMIKDCLYCDEAASLKRQSILTVLHYLLKYTT 754
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGT 1022
++ PI+PHLAEE+ +H P ++G+
Sbjct: 755 LSLGPILPHLAEEINNHYPFKEGS 778
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 188/405 (46%), Positives = 257/405 (63%), Gaps = 20/405 (4%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
G EL S + EA P+FILHDGPPYANG PH+GHA+NKILKD R +L+G RVHY
Sbjct: 35 GLYELQSKRTEA----PQFILHDGPPYANGPPHVGHALNKILKDFVNRYKVLRGYRVHYR 90
Query: 63 PGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
PGWDCHGLPIE KA +S PL +RK A+++A I TQ+ F SWGVL DW H Y
Sbjct: 91 PGWDCHGLPIEQKASSSIPINAHPLTVRKVARDYAKSAIKTQEKAFRSWGVLGDWGHP-Y 149
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +EY NQ+ FYN+YKQ IYR KPVYWSPSS TALAE+ELEYK DHVS S+Y+K
Sbjct: 150 LTMSREYESNQIDVFYNMYKQGCIYRSFKPVYWSPSSVTALAEAELEYK-DHVSPSVYVK 208
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAK 239
++ P +LEG + +L+WTTTPW+LP N+ I +N A +YSV + ++ +I +
Sbjct: 209 FP-SKFP-QILEGKL-VQSLVWTTTPWTLPGNRAICYNHAHQYSVIKAESSSELFLIGSD 265
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE-----QRDLKLLPAGFVSSSKGT 294
L E F D V+ FPG L+ Y +P+ + + L LP+ VSS +GT
Sbjct: 266 VLNEKGSELF-GDYSVIDTFPGHSLEGGAYHNPLTNQLMIANEGTLPFLPSSHVSSKEGT 324
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
GLVH APAHG DD+ + + + +L+ +G Y G L GL++ G ++++ L+
Sbjct: 325 GLVHTAPAHGFDDYTVGKRHSLDLTSLVNERGCYDDWVGGDLSGLDVFKSGNEKIISLLR 384
Query: 355 PD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +L Y+H YPYDWRTK+PV++++++QWF E ++ +A+
Sbjct: 385 ANESLLHHSQYKHRYPYDWRTKEPVLIRSTKQWFASLETLRDKAI 429
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 101/165 (61%), Gaps = 5/165 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPV 1164
+L+ +G Y G L GL++ G ++++ L+ + +L Y+H YPYDWRTK+PV
Sbjct: 350 SLVNERGCYDDWVGGDLSGLDVFKSGNEKIISLLRANESLLHHSQYKHRYPYDWRTKEPV 409
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
++++++QWF E ++ +A+ L+ V +P S+ K + D + P WCISRQRVWG+P+P
Sbjct: 410 LIRSTKQWFASLETLRDKAIKALDDVKGIPPSSVKRVTDMVESSPEWCISRQRVWGLPLP 469
Query: 1225 VFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
VFY + D ++ I+H L +H D WW+LP+ +LL S
Sbjct: 470 VFYPLDNPDGYLITADTIQHIKKLFLKHSSDSWWTLPLTELLPPS 514
Score = 46.2 bits (108), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 1039 IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGT 1093
+ K LYCD R S L LH + ++ PI+PHLAEE+ +H P ++G+
Sbjct: 724 MIKDCLYCDEAASLKRQSILTVLHYLLKYTTLSLGPILPHLAEEINNHYPFKEGS 778
>gi|209523554|ref|ZP_03272108.1| isoleucyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|209495959|gb|EDZ96260.1| isoleucyl-tRNA synthetase [Arthrospira maxima CS-328]
Length = 697
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/516 (40%), Positives = 300/516 (58%), Gaps = 46/516 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H S+SIY ++ + + E + DL IWTTTPW++P N
Sbjct: 196 TALAEAELEYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAIWTTTPWTIPGNLA 255
Query: 474 IAFNPALEYSVASVKGAN--------VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
+A NP L Y+V +G + ++VA LVE L TF T++ V G L++ T
Sbjct: 256 VALNPELTYAVVETQGDSESPIEFKYLLVAAELVERLSATFHTNLTVKATVKGALLENCT 315
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
Y HP+ + + L+ +V++ GTGLVH AP HGQ+D+++ +P+L+ + G +
Sbjct: 316 YKHPLFDRESPI-LIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILSPVDENGDF 374
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
+ +AG GLN+L D ++ ++ ++ E YQH YPYDWRTKKP I +A++QWF
Sbjct: 375 TEEAGE-FAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKPTIFRATEQWF 433
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
E + +AL +++V ++P + + ++ R WCISRQR WGVPIPVFY+ +T
Sbjct: 434 ASVEGFREQALEAIKQVQWIPSQGENRITPMVSDRSDWCISRQRSWGVPIPVFYEEETGE 493
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN--VTKSNDILDIWFDSGISW 759
++NE I H +I +HG D WW LSVE+LL S VN+ K D +D+WFDSG SW
Sbjct: 494 PLLNEETINHVKDIIAQHGTDAWWKLSVEELLPESYVNNGKKYRKGTDTMDVWFDSGSSW 553
Query: 760 SHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+ V K + PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG K
Sbjct: 554 AAVAKQRPELAYPADIYLEGSDQHRGWFQSSLLTSVANHGIAPYKTVLTHGFVLDEKGYK 613
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS+GNV+ + G K ++ PAYG D+LR WV++
Sbjct: 614 MSKSLGNVVDPAVVINGGKN--------------------QQQDPAYGADILRLWVSS-V 652
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN 910
VP+GKNIL D +KIR++ R+LLG LH+
Sbjct: 653 DYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHD 688
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 178/400 (44%), Positives = 249/400 (62%), Gaps = 21/400 (5%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N FI+HDGPPYANG HIGHA+NKILKDI R LQG++V YVPGWDCHGLPIELK
Sbjct: 48 NPGDRFIIHDGPPYANGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELK 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S+ + L+PL +R+KA++FAL+T+ QK +F+ +GV DWE N Y T EY
Sbjct: 108 VLQQMKQSEREQLTPLTLREKARDFALKTVEEQKTQFQRYGVWGDWE-NPYLTLTPEYEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIYR LKPV+WSPSS+TALAE+ELEY H S+SIY ++ +
Sbjct: 167 AQIAVFGVMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFRITSLAES 226
Query: 192 LLEGAT----DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--------VIVAK 239
+ E + DL IWTTTPW++P N +A NP L Y+V +G + ++VA
Sbjct: 227 VRELLSPYLPDLGVAIWTTTPWTIPGNLAVALNPELTYAVVETQGDSESPIEFKYLLVAA 286
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
LVE L TF T++ V G L++ TY HP+ + + L+ +V++ GTGLVH
Sbjct: 287 ELVERLSATFHTNLTVKATVKGALLENCTYKHPLFDRESPI-LIGGDYVTTESGTGLVHT 345
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP HGQ+D+++ +P+L+ + G ++ +AG GLN+L D ++ ++ +
Sbjct: 346 APGHGQEDYIVGQRYGLPILSPVDENGDFTEEAGE-FAGLNVLKDANGAIIEALQEAGSL 404
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ E YQH YPYDWRTKKP I +A++QWF E + +AL
Sbjct: 405 IKEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFREQAL 444
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 5/170 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + G ++ +AG GLN+L + ++ ++ ++ E YQH YPYDWRTKKP
Sbjct: 365 LSPVDENGDFTEEAGE-FAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKP 423
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A++QWF E + +AL ++ V ++P + + ++ R WCISRQR WGVPI
Sbjct: 424 TIFRATEQWFASVEGFREQALEAIKQVQWIPSQGENRITPMVSDRSDWCISRQRSWGVPI 483
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSN 1271
PVFY+ +T ++NE I H +I +HG D WW L VE+LL S VN+
Sbjct: 484 PVFYEEETGEPLLNEETINHVKDIIAQHGTDAWWKLSVEELLPESYVNNG 533
>gi|406868752|gb|EKD21789.1| isoleucyl-tRNA synthetase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 982
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/617 (37%), Positives = 339/617 (54%), Gaps = 43/617 (6%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEYK DH+S + Y+K L VP L T++ A++WTTTPW+LPAN+ I
Sbjct: 213 TALAEAELEYKEDHVSTAAYVKFPLMSVPDVARETLPEGTEVSAVVWTTTPWTLPANRAI 272
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD--IDVVCD-FPGQYLQDITYIHPI- 530
A +EYS+ +G ++VA + N+ ++ +++V D G+ L+ +Y +P+
Sbjct: 273 AVGAEMEYSLVRSRGDVLLVASTRLPNIASVLSSESPLELVLDGILGKDLESCSYTNPVR 332
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+ ++ A FVS+ G+GLVH AP HG DD+ L I + + + G ++ A
Sbjct: 333 GNDGGSQPIVCADFVSAESGSGLVHLAPGHGMDDYELCTKLGIEAVAPVNDLGCFTAAAL 392
Query: 591 PG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
P LEG +L G +VL L+ VL T Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 393 PENPEVLEGTPVLDGGSKKVLTLLGDKVLATHEYKHKYPYDWRTKLPVIIRATEQWFADV 452
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI-IVN 705
+ +K +AL LE+ F+P S + L I R WCISRQR WGVPIP Y+ D + ++
Sbjct: 453 QHVKDDALKRLEKCQFIPGSGRARLESFIKGRSEWCISRQRAWGVPIPALYNEDGVAVLT 512
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+A++ H +++ + G D WW+ + + + + + D +D+WFDSG SW+
Sbjct: 513 DASVAHIISVVQKRGIDAWWTDAADDPAWIVPGLEGSYRRGKDTMDVWFDSGTSWTQT-- 570
Query: 765 DKPAHVYMEGMDQINGWFMSSLL--TSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+ A VY+EG DQ GWF SSLL TS + K APF+ + HGF +D+KG KMSKS+GN
Sbjct: 571 EGQAGVYIEGTDQHRGWFQSSLLTHTSASGKGYAPFKKLITHGFTLDDKGKKMSKSIGNT 630
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT--V 880
I+ I G+ P K G A G D LR WV AS D T +
Sbjct: 631 IAPSQIIDGSLLPPIKSKK----------KAGGPSSQALGPDALRLWV---ASSDYTRDI 677
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTL 940
IG ++L ++ + K R +L+ LLG +H S++ S+ +D L +L E + +
Sbjct: 678 SIGPSVLLANHTALVKYRLTLKMLLGSMHVRSQAPLSL---LDQIALIQLGECVRHVTSA 734
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y ++ R + ++ LSAFY +KDRLYCD G L IFH LL
Sbjct: 735 YESTEHHRGVNAINRYINGGLSAFYIEAIKDRLYCDDGGG--------VLPEIFHGLLCM 786
Query: 1001 VAPIMPHLAEEVYSHLP 1017
+API PHL EE + + P
Sbjct: 787 LAPICPHLVEEAWEYRP 803
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 251/422 (59%), Gaps = 31/422 (7%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQ FILHDGPPYANG+ HIGHA+NKILKDI +R + +G + +VPGW
Sbjct: 40 ELYAWQSSQGPRLGPFILHDGPPYANGSLHIGHALNKILKDIIVRVKVQEGYKATFVPGW 99
Query: 66 DCHGLPIELKAI-------------------TSKDKLLSPLDIRKKAKNFALETINTQKA 106
DCHGLPIE+KA+ +++ L + +R+ A+ A +T+ Q
Sbjct: 100 DCHGLPIEIKALEQQRLKKSKSEGEFGENGEGNREVELDAVGVRRAARALATKTVKEQMK 159
Query: 107 EFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAES 166
F+ WGV+ DWE N + T D + QL F ++ K+ I+R KPVYWSPSSRTALAE+
Sbjct: 160 GFQEWGVMGDWE-NAWKTMDPAFEIKQLEVFRDMAKKGLIFRRYKPVYWSPSSRTALAEA 218
Query: 167 ELEYKPDHVSKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPAL 223
ELEYK DHVS + Y+K L VP L T++ A++WTTTPW+LPAN+ IA +
Sbjct: 219 ELEYKEDHVSTAAYVKFPLMSVPDVARETLPEGTEVSAVVWTTTPWTLPANRAIAVGAEM 278
Query: 224 EYSVASVKGANVIVAKCLVESLKWTFQTD--IEVVCD-FPGQYLQDITYIHPI-NKEQRD 279
EYS+ +G ++VA + ++ ++ +E+V D G+ L+ +Y +P+ +
Sbjct: 279 EYSLVRSRGDVLLVASTRLPNIASVLSSESPLELVLDGILGKDLESCSYTNPVRGNDGGS 338
Query: 280 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG---- 335
++ A FVS+ G+GLVH AP HG DD+ L I + + + G ++ A P
Sbjct: 339 QPIVCADFVSAESGSGLVHLAPGHGMDDYELCTKLGIEAVAPVNDLGCFTAAALPENPEV 398
Query: 336 LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 395
LEG +L G +VL L+ VL T Y+H YPYDWRTK PVI++A++QWF D + +K +
Sbjct: 399 LEGTPVLDGGSKKVLTLLGDKVLATHEYKHKYPYDWRTKLPVIIRATEQWFADVQHVKDD 458
Query: 396 AL 397
AL
Sbjct: 459 AL 460
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 1/135 (0%)
Query: 1123 LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 1182
LEG +L G +VL L+ VL T Y+H YPYDWRTK PVI++A++QWF D + +K +
Sbjct: 399 LEGTPVLDGGSKKVLTLLGDKVLATHEYKHKYPYDWRTKLPVIIRATEQWFADVQHVKDD 458
Query: 1183 ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI-IVNEANIKH 1241
AL LE F+P S + L I R WCISRQR WGVPIP Y+ D + ++ +A++ H
Sbjct: 459 ALKRLEKCQFIPGSGRARLESFIKGRSEWCISRQRAWGVPIPALYNEDGVAVLTDASVAH 518
Query: 1242 FCTLIDEHGPDFWWS 1256
+++ + G D WW+
Sbjct: 519 IISVVQKRGIDAWWT 533
>gi|145245972|ref|XP_001395235.1| isoleucyl-tRNA synthetase [Aspergillus niger CBS 513.88]
gi|134079947|emb|CAK48431.1| unnamed protein product [Aspergillus niger]
Length = 1005
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/646 (37%), Positives = 343/646 (53%), Gaps = 57/646 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L +P HL + ++ A+IWTTTPW+LPAN
Sbjct: 203 GTALAEAELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKDKEISAVIWTTTPWTLPANA 262
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPI 530
I+ +P+L+Y+ V S +++A+ +E L+ + D+ V+ PG L D T P+
Sbjct: 263 AISVHPSLDYTIVESDTQGYLLIAQSRLEYLEGILKEDLSVIVPAIPGSKLADQTTYRPL 322
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K + ++ A FV++ G+GLVHCAP HG +D+ L+ IP + + GK++
Sbjct: 323 FKGSDAEPQPIIAADFVTADSGSGLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDK 382
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++L DG VL VE ++ Y+H YPYDWR+K P+I++A++QW
Sbjct: 383 AMPSDPTRLSGKSVLSDGNAAVLEYVESQGLLITKHRYEHKYPYDWRSKLPIIIRATEQW 442
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DG 699
F D I+ A+ LE+VNFVP + ++ L + + R WCISRQR WGVPIP Y G
Sbjct: 443 FADVADIRGSAMTALEDVNFVPTAGRQRLENFVKNRSEWCISRQRAWGVPIPALYHRGTG 502
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-------LLNTSDVNSNVTKSNDILDIW 752
D ++ + ++ H +I+E G D WW+ L + S + D +D+W
Sbjct: 503 DALLTKD-SVSHIMNVIEERGIDAWWTDDANDEAWIPPALRDAS--GPGYRRGTDTMDVW 559
Query: 753 FDSGISWSHV---LKDK--PAHVYMEGMDQINGWFMSSLLTSVALK----HT----APFR 799
FDSG SW+ + +D PA VY+EG DQ GWF S LLT +A + HT APF+
Sbjct: 560 FDSGTSWTEIDLPYRDGGYPADVYLEGTDQHRGWFQSGLLTFIAHQLASGHTASPRAPFK 619
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
N+ HGF +DE+G KMSKS+GNVI I G LP + G Q + P
Sbjct: 620 NLVTHGFTLDEEGRKMSKSIGNVIQPESIMDGT-LLPPLKPRKGK-----GKKQAENQAP 673
Query: 860 AY---GVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHN---H 911
Y G D LR WV AS D T V IGK +L + + K R + + LLG L +
Sbjct: 674 VYDALGPDALRMWV---ASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRLE 730
Query: 912 SESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
+ VD LK L + F++ +A + + E SAFY +KD
Sbjct: 731 DRLPYDQLQQVDRIALKHLSDTVLACQKACENFEFYKAVNAINRWANLEFSAFYMEAIKD 790
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
RLY + N +R + TL +I+H L +API P L EE + H P
Sbjct: 791 RLYTYAENSTSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTP 836
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/427 (42%), Positives = 253/427 (59%), Gaps = 23/427 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQ+ F+LHDGPPYANG HIGHA+NK+LKDI R L GKR+ YVPGW
Sbjct: 42 DLYAWQQRERPASQPFVLHDGPPYANGDLHIGHALNKVLKDIICRVQLGLGKRIRYVPGW 101
Query: 66 DCHGLPIELKAITSKDKL--------LSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ ++ +L +S +RK A+ A T+ Q F S+ V+ADW
Sbjct: 102 DCHGLPIELKALEAQKELQGQEHNRPVSAALVRKAARKLADRTVKAQMKGFRSFAVMADW 161
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E N + T DK + K QL F + + IYR KPVYWSPS+ TALAE+ELEYK DHVS
Sbjct: 162 E-NHWKTMDKAFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAEAELEYKEDHVST 220
Query: 178 SIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKG 232
+ +K L +P HL + ++ A+IWTTTPW+LPAN I+ +P+L+Y+ V S
Sbjct: 221 AALVKYPLASIPEHLAQDPLLKDKEISAVIWTTTPWTLPANAAISVHPSLDYTIVESDTQ 280
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVS 289
+++A+ +E L+ + D+ V+ PG L D T P+ K + ++ A FV+
Sbjct: 281 GYLLIAQSRLEYLEGILKEDLSVIVPAIPGSKLADQTTYRPLFKGSDAEPQPIIAADFVT 340
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDG 345
+ G+GLVHCAP HG +D+ L+ IP + + GK++ A P L G ++L DG
Sbjct: 341 ADSGSGLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLSDG 400
Query: 346 KDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVG 403
VL VE ++ Y+H YPYDWR+K P+I++A++QWF D I+ A+
Sbjct: 401 NAAVLEYVESQGLLITKHRYEHKYPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDV 460
Query: 404 NILGRVG 410
N + G
Sbjct: 461 NFVPTAG 467
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + GK++ A P L G ++L +G VL VE ++ Y+H YPYDWR+K
Sbjct: 373 VDDNGKFTDKAMPSDPTRLSGKSVLSDGNAAVLEYVESQGLLITKHRYEHKYPYDWRSKL 432
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ A+ LE VNFVP + ++ L + + R WCISRQR WGVP
Sbjct: 433 PIIIRATEQWFADVADIRGSAMTALEDVNFVPTAGRQRLENFVKNRSEWCISRQRAWGVP 492
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y GD ++ + ++ H +I+E G D WW+
Sbjct: 493 IPALYHRGTGDALLTKD-SVSHIMNVIEERGIDAWWT 528
>gi|358387593|gb|EHK25187.1| hypothetical protein TRIVIDRAFT_84998 [Trichoderma virens Gv29-8]
Length = 949
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/671 (36%), Positives = 355/671 (52%), Gaps = 53/671 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH+S + Y++ + + +P L E L+A IWTTTPW+LPAN+
Sbjct: 190 TALAEAELEYRDDHVSTAAYVRFPIMSDWSSIPG-LSEFKGQLYAAIWTTTPWTLPANKA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
IA + L+Y + V ++VA+ VE ++ + + PG L + Y + +
Sbjct: 249 IAVHNELDYVLLQVGNDGILVAESRVEEIQKNIPSAAVIAKSIPGSQLTGLLYRNKLRGS 308
Query: 534 QRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
L+ ++ A FVS+ GTGLVH AP HGQ+D+ A I IT++G ++P+A P
Sbjct: 309 ASSLQPIVHAEFVSADSGTGLVHMAPGHGQEDYQACSALGIEAFAPITDEGHFTPEAYPD 368
Query: 593 -----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G +IL G VL LV DVLWT QH YPYDWRTKKPV+++A+ QWF D
Sbjct: 369 DPEKLTSGPSILDGGSQAVLELVGQDVLWTHKLQHKYPYDWRTKKPVVIRATAQWFADVG 428
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVN 705
IK +AL L +V FVPES + L + R WCISRQR WGVPIP YD G+ ++ +
Sbjct: 429 SIKEDALQALGQVRFVPESGRVRLESFVKGRSEWCISRQRSWGVPIPALYDESGNAVMTD 488
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLLNTS-DVNSNVTKSNDILDIWFDSGISWSHVLK 764
E +I+H +++++ D W+S + + + + + D +D+WFDSG SW+ +
Sbjct: 489 E-SIEHIISVMEQKTSDAWFSDAPDDAAWIAPSLKGTYRRGTDTMDVWFDSGSSWTEI-- 545
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVALKH---------TAPFRNVFLHGFVVDEKGAKM 815
+P VY+EG DQ GWF SSLLT VA + PF + HGF +D +G KM
Sbjct: 546 GRPVDVYLEGSDQHRGWFQSSLLTFVAAQKADGKAGADIAPPFGTLITHGFTLDAQGKKM 605
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GN I +I +G K LP KS GN A + A G D LR W AA +
Sbjct: 606 SKSLGNTIVPSEIMEG-KLLPPL-KSKGN--------DAATRFDALGTDALRLW-AASSD 654
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQN 935
+ +G +IL + K R++L+ LLG LH S +++ + +L + Q+
Sbjct: 655 FTSDILVGASILQPIHSALIKYRTTLKMLLGSLH-QSALEAPLTKLDQIAIL----QLQD 709
Query: 936 TMDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
M + Y +++ +A+ ++ ++ +LSAFY +KDRLYC G L
Sbjct: 710 VMAQVWEAYSNYEFHKAAGLINRWIATDLSAFYLEGLKDRLYCG--------DGGDVLVP 761
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGE 1052
I LR +API P L EE +SH PS +SF H L S I L D
Sbjct: 762 ILVGFLRMLAPITPMLVEEAWSHRPSWMVEDASFEHPARQLYNSHVIDPARLTLDQAQLR 821
Query: 1053 ARLSGLHTLHN 1063
L L +H+
Sbjct: 822 LHLPILSAVHD 832
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/402 (44%), Positives = 240/402 (59%), Gaps = 13/402 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
Y WQ + F+LHDGPPYANG H GHA+NK LKD+ R + G+RV Y P WD
Sbjct: 36 FYQWQTNNRPKENPFVLHDGPPYANGPLHAGHAINKTLKDMINRIQVQGGRRVMYRPSWD 95
Query: 67 CHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTF 125
CHGLPIE+KA+ S K LSP IR+ A+ A +TI Q F+S+ V+++W+ N + T
Sbjct: 96 CHGLPIEMKALGESGTKGLSPPKIRESARRLASKTILDQMKGFQSFAVMSEWD-NKWTTM 154
Query: 126 DKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL 185
D+ + QL F + + IYR KPVYWS SSRTALAE+ELEY+ DHVS + Y++ +
Sbjct: 155 DRAFEIRQLRVFQKMVRSGLIYRKHKPVYWSTSSRTALAEAELEYRDDHVSTAAYVRFPI 214
Query: 186 ----NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ +P L E L+A IWTTTPW+LPAN+ IA + L+Y + V ++VA+
Sbjct: 215 MSDWSSIPG-LSEFKGQLYAAIWTTTPWTLPANKAIAVHNELDYVLLQVGNDGILVAESR 273
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCA 300
VE ++ + + PG L + Y + + L+ ++ A FVS+ GTGLVH A
Sbjct: 274 VEEIQKNIPSAAVIAKSIPGSQLTGLLYRNKLRGSASSLQPIVHAEFVSADSGTGLVHMA 333
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLVEP 355
P HGQ+D+ A I IT++G ++P+A P G +IL G VL LV
Sbjct: 334 PGHGQEDYQACSALGIEAFAPITDEGHFTPEAYPDDPEKLTSGPSILDGGSQAVLELVGQ 393
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
DVLWT QH YPYDWRTKKPV+++A+ QWF D IK +AL
Sbjct: 394 DVLWTHKLQHKYPYDWRTKKPVVIRATAQWFADVGSIKEDAL 435
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 97/155 (62%), Gaps = 8/155 (5%)
Query: 1109 ITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
IT++G ++P+A P G +IL G VL LV DVLWT QH YPYDWRTKKP
Sbjct: 355 ITDEGHFTPEAYPDDPEKLTSGPSILDGGSQAVLELVGQDVLWTHKLQHKYPYDWRTKKP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+++A+ QWF D IK +AL L V FVPES + L + R WCISRQR WGVPI
Sbjct: 415 VVIRATAQWFADVGSIKEDALQALGQVRFVPESGRVRLESFVKGRSEWCISRQRSWGVPI 474
Query: 1224 PVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
P YD G+ ++ +E +I+H +++++ D W+S
Sbjct: 475 PALYDESGNAVMTDE-SIEHIISVMEQKTSDAWFS 508
>gi|340897454|gb|EGS17044.1| mitochondrial isoleucyl-tRNA synthetase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1375
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/699 (35%), Positives = 371/699 (53%), Gaps = 69/699 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEG-ATDLHALIWTTTPWSLPANQF 473
GTALAE+ELEY +H+S+S Y++ + +L LEG L+A+IWTTTPW+LPAN+
Sbjct: 591 GTALAEAELEYNENHVSRSAYIRFPIVGDYGNLPGLEGFQGKLYAVIWTTTPWTLPANRA 650
Query: 474 IAFNPALEYSVASVKGANVIVAK-CLVENLKWTFQ--------TDIDVVCDFPGQYLQDI 524
IA + L Y + V G +VA+ CL K + +++ G+ L +
Sbjct: 651 IAVHEDLTYHIVKVDGDAYLVAENCLGRVAKILIKEGEEGAEVAAPEILGSVKGRQLTQL 710
Query: 525 TYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 583
Y++ + + + G FV+ + G+GLVHCAP HG DD+ L IPV + N G
Sbjct: 711 CYVNALRGRSAAPQPIIHGHFVTEASGSGLVHCAPGHGFDDYQACLPLDIPVDAPVDNDG 770
Query: 584 KYSPDAGPG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKAS 639
++ +A P L+G ++L DG VL ++ DVL +Y+H YPYDWRTKKP+I++A+
Sbjct: 771 LFTEEAYPDDPARLKGRSVLEDGGPAVLEILGDDVLKVHDYKHKYPYDWRTKKPIIIRAT 830
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD- 698
QWF D E IK +A+A LEEV FVPES K L + R WCISRQR WGVPIP Y+
Sbjct: 831 AQWFADVELIKNQAVAALEEVKFVPESGKNRLESFVKGRSEWCISRQRAWGVPIPALYEP 890
Query: 699 -GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVE------QLLNTSDVNSNVTKSNDILDI 751
G+ ++ +E + H +I+E G D WW+ +++ + L +S + T+ D +D+
Sbjct: 891 NGNAVMTDEV-MDHLIKVIEERGIDAWWTDALDDPAWLPESLRSSGI--KYTRGLDTMDV 947
Query: 752 WFDSGISWSHVLKDKPAHVYMEGMDQINGWFMSSLLTSVA------------LKHT---A 796
WFDSG SW+ +L ++ A +Y+EG DQ GWF SSLLT VA HT +
Sbjct: 948 WFDSGSSWT-MLNNQQADLYLEGSDQARGWFQSSLLTRVAAMVEQQDSASGSTAHTLGLS 1006
Query: 797 PFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAK 856
PF+ + HGF +D++G KMSKS+GNVISA D+ G P + N ++ I
Sbjct: 1007 PFKTLITHGFTLDKEGRKMSKSLGNVISADDVMDGTLMPPLKPRKGSN--NSQPIKD--- 1061
Query: 857 KLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
A G D LR WVA+ V +G+ +L + + K R+++R L G +H + +
Sbjct: 1062 ---ALGPDALRLWVASSDYSGDVV-LGEPVLKTIHQAILKYRTTIRMLTGSMHESARTAP 1117
Query: 917 SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
+ +D L +L + + + Y F++ +A L +++ N+LSAFY +KDRLYC
Sbjct: 1118 LTT--LDHIALIQLRDAMDAVGRHYANFEFNKAFMTLNHWLTNDLSAFYLEALKDRLYCA 1175
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
G L IF LR +AP+ P L EE + H P S + + Y
Sbjct: 1176 DGGG--------VLEPIFIGFLRMLAPMTPVLVEEAWEHRPEWLKADSKYADSPLKHLYE 1227
Query: 1037 GSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPI 1075
+ S EAR L V++R++A I
Sbjct: 1228 APLLHDPSRALSPEDEAR------LRKDIPVIMRSLAAI 1260
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 252/412 (61%), Gaps = 19/412 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQ EFILHDGPPYANG H GHA+NKILKD+ LR + +G+RVHYVPGW
Sbjct: 437 ELYAWQAANRPADNEFILHDGPPYANGALHAGHALNKILKDMILRVQVQKGRRVHYVPGW 496
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIELKA+ + K ++P IR+ A+ A +TI Q F S+ V+ADW+ + T
Sbjct: 497 DCHGLPIELKAVDAAAGKHMTPAAIRQAARKLAADTILQQMKSFRSYAVMADWDAR-WAT 555
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D+EY QL F + ++ +YR KPVYWSPSS TALAE+ELEY +HVS+S Y++
Sbjct: 556 MDREYEIRQLRLFQKMARRGLVYRRFKPVYWSPSSGTALAEAELEYNENHVSRSAYIRFP 615
Query: 185 LNQVPAHL--LEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK-C 240
+ +L LEG L+A+IWTTTPW+LPAN+ IA + L Y + V G +VA+ C
Sbjct: 616 IVGDYGNLPGLEGFQGKLYAVIWTTTPWTLPANRAIAVHEDLTYHIVKVDGDAYLVAENC 675
Query: 241 LVESLKWTFQ--------TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSS 291
L K + E++ G+ L + Y++ + + + G FV+ +
Sbjct: 676 LGRVAKILIKEGEEGAEVAAPEILGSVKGRQLTQLCYVNALRGRSAAPQPIIHGHFVTEA 735
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKD 347
G+GLVHCAP HG DD+ L IPV + N G ++ +A P L+G ++L DG
Sbjct: 736 SGSGLVHCAPGHGFDDYQACLPLDIPVDAPVDNDGLFTEEAYPDDPARLKGRSVLEDGGP 795
Query: 348 QVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
VL ++ DVL +Y+H YPYDWRTKKP+I++A+ QWF D E IK +A+
Sbjct: 796 AVLEILGDDVLKVHDYKHKYPYDWRTKKPIIIRATAQWFADVELIKNQAVAA 847
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 98/154 (63%), Gaps = 7/154 (4%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ N G ++ +A P L+G ++L +G VL ++ DVL +Y+H YPYDWRTKKP+
Sbjct: 766 VDNDGLFTEEAYPDDPARLKGRSVLEDGGPAVLEILGDDVLKVHDYKHKYPYDWRTKKPI 825
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D E IK +A+A LE V FVPES K L + R WCISRQR WGVPIP
Sbjct: 826 IIRATAQWFADVELIKNQAVAALEEVKFVPESGKNRLESFVKGRSEWCISRQRAWGVPIP 885
Query: 1225 VFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
Y+ G+ ++ +E + H +I+E G D WW+
Sbjct: 886 ALYEPNGNAVMTDEV-MDHLIKVIEERGIDAWWT 918
>gi|196008044|ref|XP_002113888.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
gi|190584292|gb|EDV24362.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
Length = 850
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/626 (36%), Positives = 349/626 (55%), Gaps = 52/626 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGATDL----HALIWTTTPWSLPAN 471
TALAE+ELEYK D+ S+++Y+K +N +P + ++G L +AL+WTTTPW++P N
Sbjct: 220 TALAEAELEYK-DYTSRAVYVKFPVNTLPGGVFGIDGKAFLTNLTYALVWTTTPWTIPFN 278
Query: 472 QFIAFNPALEYSVASVKGANVIVAKC--LVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
+ + ++P+L+Y A + C L+ ++ T + GQ L + HP
Sbjct: 279 EAVCYHPSLKYCFAENPKTAEVYCVCTDLLPKVEDILNTKLTRFLSNIGQELDGMVCGHP 338
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
+ +++ LLP V+ GTGLVH APAHG DD+ ++ ++ + + G Y+ DA
Sbjct: 339 LYRDKIS-PLLPGIHVTKESGTGLVHTAPAHGIDDYNISRIYELSLDCAVDKDGLYTEDA 397
Query: 590 GPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G LEG +LGDG + L L+ ++L +Y H YP+DWRTKKPVIL+A++QWF T
Sbjct: 398 GSELEGKYVLGDGNNAALELLRDSGNLLHESDYVHRYPHDWRTKKPVILRATKQWFTMTS 457
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG--DTIIVN 705
+ +A A + + PE ++ I WCISRQR WGVPIPVFY D +++
Sbjct: 458 GLMQQAKANIFSLKMYPEPSRNRFLSMIENHD-WCISRQRYWGVPIPVFYHKLTDEPLID 516
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT------KSNDILDIWFDSGISW 759
+ +I H L+ E+G + WW+L +E+L + T + D +D+WFDSG SW
Sbjct: 517 DDSIAHITKLVREYGSNCWWNLPMEKLFPIELAMKHYTSPAKFRRGEDTMDVWFDSGTSW 576
Query: 760 SHVLKDKP--AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
+ V+KD+ A +Y+EG DQ GWF SSL+TS + AP++ + HGFV+DE KMSK
Sbjct: 577 ATVMKDQDGVADLYVEGTDQHRGWFHSSLITSTVTQSKAPYKGILTHGFVMDENNRKMSK 636
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GN++ + G K K VG G DVLR WVAA +
Sbjct: 637 SLGNIVYPDEAITGTK------KKVG-----------------LGADVLRLWVAA-SGYA 672
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
+ +IL + ++K+R+S R+LLG L++ + ++ + +D Y+L R +F
Sbjct: 673 ADLSCSNSILERFGESLRKVRNSARFLLGNLYDFNIASNEVEHNQMLEIDQYVLHRTLKF 732
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y Q+A A+R ++NFV +L A YF +KDRLY +S NG R S +L +I
Sbjct: 733 YEDTISSYDNMQFAPATRHIMNFVNTDL-ATYFEAIKDRLYAESSNGILRRSAQTSLFHI 791
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSR 1019
VL R + P+ PHLAEE+ + PS+
Sbjct: 792 LDVLTRAIGPVTPHLAEEICTFAPSK 817
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 181/407 (44%), Positives = 254/407 (62%), Gaps = 17/407 (4%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
GF LY WQR+ K EF LHDGPPYANG H+GH +NK+LKDI R +LQG +VHY
Sbjct: 61 GFDSLYEWQRQRETQK-EFSLHDGPPYANGDLHMGHLLNKVLKDIINRHKVLQGYKVHYK 119
Query: 63 PGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
PGWDCHGLPIELKA+ + + + IR+ AK FA TI Q F+ WGV+A+W +
Sbjct: 120 PGWDCHGLPIELKALKGDNYDNNKMPAIQIRETAKAFAEATIEEQMKSFKRWGVMANW-N 178
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+ Y T DK+Y NQL FY +YK+ YIYR KPV+WSPSS+TALAE+ELEYK D+ S+++
Sbjct: 179 DVYKTTDKDYEANQLQVFYEMYKKGYIYRGYKPVFWSPSSKTALAEAELEYK-DYTSRAV 237
Query: 180 YLKIKLNQVPAHL--LEGATDL----HALIWTTTPWSLPANQFIAFNPALEYSVASVKGA 233
Y+K +N +P + ++G L +AL+WTTTPW++P N+ + ++P+L+Y A
Sbjct: 238 YVKFPVNTLPGGVFGIDGKAFLTNLTYALVWTTTPWTIPFNEAVCYHPSLKYCFAENPKT 297
Query: 234 NVIVAKC--LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSS 291
+ C L+ ++ T + GQ L + HP+ +++ LLP V+
Sbjct: 298 AEVYCVCTDLLPKVEDILNTKLTRFLSNIGQELDGMVCGHPLYRDKIS-PLLPGIHVTKE 356
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH 351
GTGLVH APAHG DD+ ++ ++ + + G Y+ DAG LEG +LGDG + L
Sbjct: 357 SGTGLVHTAPAHGIDDYNISRIYELSLDCAVDKDGLYTEDAGSELEGKYVLGDGNNAALE 416
Query: 352 LVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
L+ ++L +Y H YP+DWRTKKPVIL+A++QWF T + +A
Sbjct: 417 LLRDSGNLLHESDYVHRYPHDWRTKKPVILRATKQWFTMTSGLMQQA 463
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ G Y+ DAG LEG +LG+G + L L+ ++L +Y H YP+DWRTKKPVIL
Sbjct: 387 VDKDGLYTEDAGSELEGKYVLGDGNNAALELLRDSGNLLHESDYVHRYPHDWRTKKPVIL 446
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF T + +A A + + PE ++ I WCISRQR WGVPIPVF
Sbjct: 447 RATKQWFTMTSGLMQQAKANIFSLKMYPEPSRNRFLSMIENHD-WCISRQRYWGVPIPVF 505
Query: 1227 YDG--DTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D ++++ +I H L+ E+G + WW+LP+E+L
Sbjct: 506 YHKLTDEPLIDDDSIAHITKLVREYGSNCWWNLPMEKLF 544
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 1041 KRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1090
K LY +S NG R S +L +I VL R + P+ PHLAEE+ + PS+
Sbjct: 768 KDRLYAESSNGILRRSAQTSLFHILDVLTRAIGPVTPHLAEEICTFAPSK 817
>gi|350637532|gb|EHA25889.1| hypothetical protein ASPNIDRAFT_212883 [Aspergillus niger ATCC 1015]
Length = 1524
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 238/645 (36%), Positives = 344/645 (53%), Gaps = 55/645 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L +P HL + ++ A+IWTTTPW+LPAN
Sbjct: 722 GTALAEAELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKDKEISAVIWTTTPWTLPANA 781
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPI 530
I+ +P+L+Y+ V S +++A+ +E L+ + D+ V+ PG L D T P+
Sbjct: 782 AISVHPSLDYTIVESDTQGYLLIAQSRLEYLEGILKEDLSVIVPAIPGSKLADQTTYRPL 841
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K + ++ A FV++ G+GLVHCAP HG +D+ L+ IP + + GK++
Sbjct: 842 FKGSDAEPQPIIAADFVTADSGSGLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDK 901
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++L DG VL VE ++ Y+H YPYDWR+K P+I++A++QW
Sbjct: 902 AMPSDPTRLSGKSVLSDGNAAVLEYVESQGLLITKHRYEHKYPYDWRSKLPIIIRATEQW 961
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DG 699
F D I+ A+ LE+VNFVP + ++ L + + R WCISRQR WGVPIP Y G
Sbjct: 962 FADVADIRGSAMTALEDVNFVPTAGRQRLENFVKNRSEWCISRQRAWGVPIPALYHRGTG 1021
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-------LLNTSDVNSNVTKSNDILDIW 752
D ++ ++ + H +I+E G D WW+ L + S + D +D+W
Sbjct: 1022 DALLTKDS-VSHIMNVIEERGIDAWWTDDANDEAWIPPALRDAS--GPGYRRGTDTMDVW 1078
Query: 753 FDSGISWSHV---LKDK--PAHVYMEGMDQINGWFMSSLLTSVALK----HT----APFR 799
FDSG SW+ + +D PA VY+EG DQ GWF S LLT +A + HT APF+
Sbjct: 1079 FDSGTSWTEIDLPYRDGGYPADVYLEGTDQHRGWFQSGLLTFIAHQLASGHTASPRAPFK 1138
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
N+ HGF +DE+G KMSKS+GNVI I G LP + G Q + P
Sbjct: 1139 NLVTHGFTLDEEGRKMSKSIGNVIQPESIMDGT-LLPPLKPRKGK-----GKKQAENQAP 1192
Query: 860 AY---GVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN---HS 912
Y G D LR WVA+ ++D V IGK +L + + K R + + LLG L +
Sbjct: 1193 VYDALGPDALRMWVASSDYTRD--VVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRLED 1250
Query: 913 ESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
+ VD LK L + F++ +A + + E SAFY +KDR
Sbjct: 1251 RLPYDQLQQVDRIALKHLSDTVLACQKACENFEFYKAVNAINRWANLEFSAFYMEAIKDR 1310
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
LY + N +R + TL +I+H L +API P L EE + H P
Sbjct: 1311 LYTYAENSTSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTP 1355
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/427 (42%), Positives = 253/427 (59%), Gaps = 23/427 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQ+ F+LHDGPPYANG HIGHA+NK+LKDI R L GKR+ YVPGW
Sbjct: 561 DLYAWQQRERPASQPFVLHDGPPYANGDLHIGHALNKVLKDIICRVQLGLGKRIRYVPGW 620
Query: 66 DCHGLPIELKAITSKDKL--------LSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ ++ +L +S +RK A+ A T+ Q F S+ V+ADW
Sbjct: 621 DCHGLPIELKALEAQKELQGQEHNGPVSAALVRKAARKLADRTVKAQMKGFRSFAVMADW 680
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E N + T DK + K QL F + + IYR KPVYWSPS+ TALAE+ELEYK DHVS
Sbjct: 681 E-NHWKTMDKAFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAEAELEYKEDHVST 739
Query: 178 SIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKG 232
+ +K L +P HL + ++ A+IWTTTPW+LPAN I+ +P+L+Y+ V S
Sbjct: 740 AALVKYPLASIPEHLAQDPLLKDKEISAVIWTTTPWTLPANAAISVHPSLDYTIVESDTQ 799
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCD-FPGQYLQDITYIHPINK--EQRDLKLLPAGFVS 289
+++A+ +E L+ + D+ V+ PG L D T P+ K + ++ A FV+
Sbjct: 800 GYLLIAQSRLEYLEGILKEDLSVIVPAIPGSKLADQTTYRPLFKGSDAEPQPIIAADFVT 859
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDG 345
+ G+GLVHCAP HG +D+ L+ IP + + GK++ A P L G ++L DG
Sbjct: 860 ADSGSGLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLSDG 919
Query: 346 KDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVG 403
VL VE ++ Y+H YPYDWR+K P+I++A++QWF D I+ A+
Sbjct: 920 NAAVLEYVESQGLLITKHRYEHKYPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDV 979
Query: 404 NILGRVG 410
N + G
Sbjct: 980 NFVPTAG 986
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + GK++ A P L G ++L +G VL VE ++ Y+H YPYDWR+K
Sbjct: 892 VDDNGKFTDKAMPSDPTRLSGKSVLSDGNAAVLEYVESQGLLITKHRYEHKYPYDWRSKL 951
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ A+ LE VNFVP + ++ L + + R WCISRQR WGVP
Sbjct: 952 PIIIRATEQWFADVADIRGSAMTALEDVNFVPTAGRQRLENFVKNRSEWCISRQRAWGVP 1011
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y GD ++ ++ + H +I+E G D WW+
Sbjct: 1012 IPALYHRGTGDALLTKDS-VSHIMNVIEERGIDAWWT 1047
>gi|358375898|dbj|GAA92473.1| isoleucyl-tRNA synthetase [Aspergillus kawachii IFO 4308]
Length = 1005
Score = 392 bits (1006), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/646 (36%), Positives = 340/646 (52%), Gaps = 57/646 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L +P HL + ++ A+IWTTTPW+LPAN
Sbjct: 203 GTALAEAELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKDKEISAVIWTTTPWTLPANA 262
Query: 473 FIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPI 530
I+ +P+L+Y++ S +++A+ +E L+ + D+ V+ PG L D T +
Sbjct: 263 AISVHPSLDYTIVDSDTQGYLLIAQSRLEYLEGILKEDLSVIVPAIPGSKLADQTTYRSL 322
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K + ++ A FV++ G+GLVHCAP HG +D+ L+ IP + + GK++
Sbjct: 323 FKGPDAEPQPIIAADFVTADSGSGLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDK 382
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++LGDG VL VE ++ Y+H YPYDWR+K P+I++A++QW
Sbjct: 383 AMPSDPTRLSGKSVLGDGNAAVLEYVESKGLLITKHRYEHKYPYDWRSKLPIIIRATEQW 442
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DG 699
F D I+ A+ LE+VNFVP + ++ L + + R WCISRQR WGVPIP Y G
Sbjct: 443 FADVADIRGSAMTALEDVNFVPTAGRQRLENFVKNRSEWCISRQRAWGVPIPALYHRGTG 502
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-------LLNTSDVNSNVTKSNDILDIW 752
D ++ + ++ H +I+E G D WW+ L + S + D +D+W
Sbjct: 503 DALLTKD-SVSHIMNVIEERGIDAWWTDDANDEAWIPPALRDAS--GPGYRRGTDTMDVW 559
Query: 753 FDSGISWSHV---LKDK--PAHVYMEGMDQINGWFMSSLLTSVA--------LKHTAPFR 799
FDSG SW+ + +D PA VY+EG DQ GWF S LLT +A APF+
Sbjct: 560 FDSGTSWTEIDLPYRDGGYPADVYLEGTDQHRGWFQSGLLTFIAHQLASGQTASPRAPFK 619
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
N+ HGF +DE+G KMSKS+GNVI I G LP + G Q + P
Sbjct: 620 NLVTHGFTLDEEGRKMSKSIGNVIQPESIMDGT-LLPPLKPRKGK-----GKKQAENQAP 673
Query: 860 AY---GVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSES 914
Y G D LR WV AS D T V IGK +L + + K R + + LLG L +
Sbjct: 674 VYDALGPDALRMWV---ASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRPE 730
Query: 915 TG---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
+ VD LK L + F++ +A + + E SAFY +KD
Sbjct: 731 DRLPYDQLQQVDRIALKHLSDTVVACQKACENFEFYKAVNAINRWANLEFSAFYMEAIKD 790
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
RLY + N +R + TL +I+H L +API P L EE + H P
Sbjct: 791 RLYTYAENSSSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTP 836
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/427 (41%), Positives = 253/427 (59%), Gaps = 23/427 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQ+ F+LHDGPPYANG HIGHA+NK+LKDI R L GKR+ YVPGW
Sbjct: 42 DLYAWQQRERPASQPFVLHDGPPYANGELHIGHALNKVLKDIICRVQLGLGKRIRYVPGW 101
Query: 66 DCHGLPIELKAITSKDKL--------LSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ ++ +L +S +RK A+ A T+ Q F S+ V+ADW
Sbjct: 102 DCHGLPIELKALEAQKELQGQEYNGPVSAALVRKAARKLADRTVKAQMKGFRSFAVMADW 161
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E N + T DK + K QL F + + IYR KPVYWSPS+ TALAE+ELEYK DHVS
Sbjct: 162 E-NHWKTMDKAFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAEAELEYKEDHVST 220
Query: 178 SIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKG 232
+ +K L +P HL + ++ A+IWTTTPW+LPAN I+ +P+L+Y++ S
Sbjct: 221 AALVKYPLASIPEHLAQDPLLKDKEISAVIWTTTPWTLPANAAISVHPSLDYTIVDSDTQ 280
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVS 289
+++A+ +E L+ + D+ V+ PG L D T + K + ++ A FV+
Sbjct: 281 GYLLIAQSRLEYLEGILKEDLSVIVPAIPGSKLADQTTYRSLFKGPDAEPQPIIAADFVT 340
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDG 345
+ G+GLVHCAP HG +D+ L+ IP + + GK++ A P L G ++LGDG
Sbjct: 341 ADSGSGLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLGDG 400
Query: 346 KDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVG 403
VL VE ++ Y+H YPYDWR+K P+I++A++QWF D I+ A+
Sbjct: 401 NAAVLEYVESKGLLITKHRYEHKYPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDV 460
Query: 404 NILGRVG 410
N + G
Sbjct: 461 NFVPTAG 467
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + GK++ A P L G ++LG+G VL VE ++ Y+H YPYDWR+K
Sbjct: 373 VDDNGKFTDKAMPSDPTRLSGKSVLGDGNAAVLEYVESKGLLITKHRYEHKYPYDWRSKL 432
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ A+ LE VNFVP + ++ L + + R WCISRQR WGVP
Sbjct: 433 PIIIRATEQWFADVADIRGSAMTALEDVNFVPTAGRQRLENFVKNRSEWCISRQRAWGVP 492
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y GD ++ + ++ H +I+E G D WW+
Sbjct: 493 IPALYHRGTGDALLTKD-SVSHIMNVIEERGIDAWWT 528
>gi|242780148|ref|XP_002479535.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
10500]
gi|218719682|gb|EED19101.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
10500]
Length = 1414
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/647 (36%), Positives = 348/647 (53%), Gaps = 52/647 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEY +HIS + ++ L ++P + L T L A+IWTTTPW+LPAN
Sbjct: 574 GTALAEAELEYNDNHISTAALVRFPLAKLPEQIRDKPLVDVTSLSAVIWTTTPWTLPANA 633
Query: 473 FIAFNPALEY-SVASVKGANVIVAKCLVENLKWTFQTDIDV-VCDFPGQYLQDITYIHPI 530
IA + +L Y V S +++A+ + + + ++ V V G L T P+
Sbjct: 634 AIAVHESLNYLIVQSSNHGQLLIAESRLGYFQDMLKEELQVLVPSIQGSELCQKTTYRPL 693
Query: 531 NKEQ--RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
+ ++ A FV++ G+GLVHCAP HG DD+ + LA+ I +T++G ++ +
Sbjct: 694 FPRDGVEEQPIIAADFVTADSGSGLVHCAPGHGMDDYEVCLAQGIQAFAPVTDEGCFTDE 753
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++L +G VL VE +L Y+H YPYDWR+K+P+I++A++QW
Sbjct: 754 AMPRDPSFLSGKSVLDEGNTLVLQYVESMSQLLCQHKYEHKYPYDWRSKRPIIIRATEQW 813
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---G 699
F D I+ ALA LE+V FVP S K+ L++ + R WCISRQR WGVPIP YD G
Sbjct: 814 FADVANIRESALASLEDVTFVPASGKQRLKNFVQNRTEWCISRQRAWGVPIPALYDKVTG 873
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-----LLNTSDVNSNVTKSNDILDIWFD 754
++ E + H +IDE G D WW+ S E D +S+ + D +D+WFD
Sbjct: 874 QAVLTKE-TVSHIMNVIDERGIDAWWTDSPEDPAWIPPFLQQDGSSDYRRGTDTMDVWFD 932
Query: 755 SGISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT----------APFR 799
SG SW+ V KD+PA +Y+EG DQ GWF SSLLT VA + +PF+
Sbjct: 933 SGTSWTQVENESLEKDRPADIYLEGTDQHRGWFQSSLLTYVAHQVASGKSDASTIKSPFK 992
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
++ HGF +D+ KMSKS+GN+I I G LP ++ ++
Sbjct: 993 HLITHGFTLDQDARKMSKSIGNIIQPDAIMNGT-LLPPLKQKKSKGTKEQKVS--GPVYD 1049
Query: 860 AYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS 917
A G D LR WV AS D T V IG+ +L + + K R + + LLG L + S +
Sbjct: 1050 ALGPDALRLWV---ASSDYTRDVVIGQQVLQTINTSLHKYRVTFKLLLGALGDFDPSV-N 1105
Query: 918 ISRYVDVYMLKRLCEFQ-----NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
+ +Y D++ + RL Q +T + F++ +A L + +E SAFY +KDR
Sbjct: 1106 LRQYEDLHKIDRLALMQLTRLVDTCRNAFDSFEFYKAVNALNRWANHEFSAFYMETLKDR 1165
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
LY ++ +G +R + TL +I+ L +API P L EE + H R
Sbjct: 1166 LYTEAEDGASRRAAQTTLFHIYTYLQELLAPITPLLVEESWEHTSER 1212
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 250/415 (60%), Gaps = 23/415 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQRE F+LHDGPPYANG H+GH++NKILKDI R+ L +GKR+HYVPGW
Sbjct: 413 ELYAWQRENRPANETFVLHDGPPYANGELHVGHSLNKILKDIINRTQLSRGKRIHYVPGW 472
Query: 66 DCHGLPIELKAITSKDKLL--------SPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ ++ K + S IRK A+ A +T+ Q F +G++ADW
Sbjct: 473 DCHGLPIELKALQAQQKNVIDFTQGPGSAATIRKAARKLAEKTVKEQMRVFRGFGIMADW 532
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E + + T DK + QL F + ++ IYR KPVYWSPS+ TALAE+ELEY +H+S
Sbjct: 533 EGH-WKTLDKGFEMKQLGIFREMVEKGLIYRRFKPVYWSPSTGTALAEAELEYNDNHIST 591
Query: 178 SIYLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQFIAFNPALEY-SVASVKG 232
+ ++ L ++P + L T L A+IWTTTPW+LPAN IA + +L Y V S
Sbjct: 592 AALVRFPLAKLPEQIRDKPLVDVTSLSAVIWTTTPWTLPANAAIAVHESLNYLIVQSSNH 651
Query: 233 ANVIVAKCLVESLKWTFQTDIEV-VCDFPGQYLQDITYIHPINKEQ--RDLKLLPAGFVS 289
+++A+ + + + +++V V G L T P+ + ++ A FV+
Sbjct: 652 GQLLIAESRLGYFQDMLKEELQVLVPSIQGSELCQKTTYRPLFPRDGVEEQPIIAADFVT 711
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDG 345
+ G+GLVHCAP HG DD+ + LA+ I +T++G ++ +A P L G ++L +G
Sbjct: 712 ADSGSGLVHCAPGHGMDDYEVCLAQGIQAFAPVTDEGCFTDEAMPRDPSFLSGKSVLDEG 771
Query: 346 KDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
VL VE +L Y+H YPYDWR+K+P+I++A++QWF D I+ AL
Sbjct: 772 NTLVLQYVESMSQLLCQHKYEHKYPYDWRSKRPIIIRATEQWFADVANIRESALA 826
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 96/157 (61%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKK 1162
+T++G ++ +A P L G ++L EG VL VE +L Y+H YPYDWR+K+
Sbjct: 744 VTDEGCFTDEAMPRDPSFLSGKSVLDEGNTLVLQYVESMSQLLCQHKYEHKYPYDWRSKR 803
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ ALA LE V FVP S K+ L++ + R WCISRQR WGVP
Sbjct: 804 PIIIRATEQWFADVANIRESALASLEDVTFVPASGKQRLKNFVQNRTEWCISRQRAWGVP 863
Query: 1223 IPVFYD---GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP YD G ++ E + H +IDE G D WW+
Sbjct: 864 IPALYDKVTGQAVLTKE-TVSHIMNVIDERGIDAWWT 899
>gi|350589265|ref|XP_003482824.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Sus
scrofa]
Length = 1055
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/498 (42%), Positives = 301/498 (60%), Gaps = 42/498 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+S+Y+K L + A L++G++ + L+WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHVSRSVYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A V ++ T T +V+ F G L+ T HP+
Sbjct: 311 CYMPESKYAVVKCSKSGDFYILAADKVTSVASTLGTTFEVISTFSGVDLESGTCTHPLIA 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
E R LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G ++ AGP
Sbjct: 371 E-RASPLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHSLSTDCLVNEDGVFTDAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G + V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++ +K
Sbjct: 430 LQNKAVLEEGTEVVIKMLQAANNLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDVK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+PESA + D + +RPYWCISRQRVWGVPIPVF+ D ++N
Sbjct: 490 TTAKDLLKKVKFIPESALNAMVDMMDRRPYWCISRQRVWGVPIPVFHHKTKDEFLINSQT 549
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
++H L++EHG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 550 VEHIAKLVEEHGSDIWWTLPSEQLL-PKEVLSQVGGPDALEYVPGRDILDIWFDSGTSWS 608
Query: 761 HVL--KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+VL D+ A +Y+EG DQ+ GWF SSLLTSVA + +PF+ V +HGF + EKG KMSKS
Sbjct: 609 YVLPGTDQRADLYLEGKDQLGGWFQSSLLTSVAARRKSPFKTVVVHGFTLGEKGEKMSKS 668
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + G Q K P +G DVLRWWV A ++
Sbjct: 669 LGNVIDPDVVINGG--------------------QDQSKEPPFGADVLRWWV-AESNVFT 707
Query: 879 TVPIGKNILNSSQDDVQK 896
V I ++L +++DDV K
Sbjct: 708 EVTISPSVLRAARDDVSK 725
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/406 (48%), Positives = 274/406 (67%), Gaps = 13/406 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 90 KCGFSELYSWQRER-KAKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IR+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGGKAQNLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+ NCY+TFD +Y QL FY +Y + IYR KPVYWSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 D-NCYYTFDGKYEARQLRIFYQMYDKGLIYRSYKPVYWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLK---IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
S+Y+K +K + A L++G++ + L+WTT PW++PANQ + + P +Y+V S G
Sbjct: 268 SVYVKFPLLKPSPKLASLIDGSSPVSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSKSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V S+ T T EV+ F G L+ T HP+ E R LLPA V+ +K
Sbjct: 328 DFYILAADKVTSVASTLGTTFEVISTFSGVDLESGTCTHPLIAE-RASPLLPANHVTMTK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A + L+ G ++ AGP L+ +L +G + V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHSLSTDCLVNEDGVFTDAAGPELQNKAVLEEGTEVVIKM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++ ++L E HSYPYDWRTKKPV+++AS+QWF++ +K A
Sbjct: 447 LQAANNLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDVKTTA 492
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG + V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVNEDGVFTDAAGPELQNKAVLEEGTEVVIKMLQAANNLLKEEELVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ +K A L+ V F+PESA ++ D + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFVNITDVKTTAKDLLKKVKFIPESALNAMVDMMDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N ++H L++EHG D WW+LP EQLL
Sbjct: 535 FHHKTKDEFLINSQTVEHIAKLVEEHGSDIWWTLPSEQLL 574
>gi|115402377|ref|XP_001217265.1| hypothetical protein ATEG_08679 [Aspergillus terreus NIH2624]
gi|114189111|gb|EAU30811.1| hypothetical protein ATEG_08679 [Aspergillus terreus NIH2624]
Length = 1519
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/641 (37%), Positives = 339/641 (52%), Gaps = 51/641 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L +P HL + L A+IWTTTPW+LPAN
Sbjct: 722 GTALAEAELEYKDDHVSTAALVKFPLVSIPTHLAQNPLLQGKKLSAVIWTTTPWTLPANA 781
Query: 473 FIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA + L+Y+V S + ++++A+ +E L+ + D+ V+ G L D T PI
Sbjct: 782 VIAVHADLQYTVVQSEEHGHLLIAQSRLEYLESMLKEDLSVIVPSILGSELADQTTYRPI 841
Query: 531 NKEQR--DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS-- 586
K + D ++ A FV++ G+GLVHCAP HG DD+ ++ IP L + + G+++
Sbjct: 842 FKGSKAEDQPIIAADFVTADSGSGLVHCAPGHGMDDYDACVSRGIPALAPVDDHGRFTDL 901
Query: 587 --PDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
PD L G ++LG+G D L VE +L Y+H YPYDWR+K P+I++A++QW
Sbjct: 902 AMPDDPARLSGKSVLGEGNDAALEYVESQGYLLAKHQYEHKYPYDWRSKLPIIIRATEQW 961
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F D I+ A+ LE+VNFVP S ++ L + + R WCISRQR WGVPIP Y T
Sbjct: 962 FADVADIRGAAVKALEDVNFVPVSGRQRLENFVKNRSEWCISRQRAWGVPIPALYHKGTG 1021
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL----NTSDVNS-NVTKSNDILDIWFDS 755
++ + + H ++IDE G D WW+ + L D + + D +D+WFDS
Sbjct: 1022 EAVLTKDTVSHIMSVIDERGVDAWWTDDADDLAWIPPTLRDASGPGYRRGTDTMDVWFDS 1081
Query: 756 GISWSHV----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT-------APFRNVFLH 804
G SW+ V PA VY+EG DQ GWF S LLT +A + APF+++ H
Sbjct: 1082 GTSWTEVPTPYADGYPADVYLEGTDQHRGWFQSGLLTFIAHQLAAGQSTPRAPFKHLVTH 1141
Query: 805 GFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY--- 861
GF +DE+G KMSKS+GNV+ I G + Q A K P Y
Sbjct: 1142 GFTLDEEGRKMSKSIGNVVHPQTIMDGTLLP--------PLKPKKGKKQQADKGPVYDAL 1193
Query: 862 GVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHN---HSESTG 916
G D LR WV AS D T V IGK +L + + K R + + LLG L + S+
Sbjct: 1194 GPDALRMWV---ASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRVESQVPY 1250
Query: 917 SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
+ D L L E T F++ +A + + E SAFY +KDRLY
Sbjct: 1251 EQLQQSDRIALMHLAEMVRTCQKACANFEFYKAVNAINRWANLEFSAFYMETIKDRLYTY 1310
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
S N +R + TL +I+H L +API P L EE + H P
Sbjct: 1311 SENSTSRRAAQTTLFHIYHYLQEVLAPITPMLVEETWEHTP 1351
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/413 (44%), Positives = 250/413 (60%), Gaps = 22/413 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQR F+LHDGPPYANG H+GHA+NKILKDI R L GKRV YVPGW
Sbjct: 562 DLYAWQRRERPADRPFVLHDGPPYANGDLHVGHALNKILKDIICRVQLGLGKRVRYVPGW 621
Query: 66 DCHGLPIELKAITSKDKLLSPLD-------IRKKAKNFALETINTQKAEFESWGVLADWE 118
DCHGLPIELKA+ ++ L D IRK A+ A T+ Q F + V+ADWE
Sbjct: 622 DCHGLPIELKALDAQRDLGKEADGPVTAAVIRKAARKLAARTVKDQMKGFRGFAVMADWE 681
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
+ + T DK++ K QL F + ++ IYR KPVYWSPS+ TALAE+ELEYK DHVS +
Sbjct: 682 SH-WKTMDKDFEKRQLGVFREMVEKGLIYRRFKPVYWSPSTGTALAEAELEYKDDHVSTA 740
Query: 179 IYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGA 233
+K L +P HL + L A+IWTTTPW+LPAN IA + L+Y+V S +
Sbjct: 741 ALVKFPLVSIPTHLAQNPLLQGKKLSAVIWTTTPWTLPANAVIAVHADLQYTVVQSEEHG 800
Query: 234 NVIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINKEQR--DLKLLPAGFVSS 290
++++A+ +E L+ + D+ V+ G L D T PI K + D ++ A FV++
Sbjct: 801 HLLIAQSRLEYLESMLKEDLSVIVPSILGSELADQTTYRPIFKGSKAEDQPIIAADFVTA 860
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS----PDAGPGLEGLNILGDGK 346
G+GLVHCAP HG DD+ ++ IP L + + G+++ PD L G ++LG+G
Sbjct: 861 DSGSGLVHCAPGHGMDDYDACVSRGIPALAPVDDHGRFTDLAMPDDPARLSGKSVLGEGN 920
Query: 347 DQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
D L VE +L Y+H YPYDWR+K P+I++A++QWF D I+ A+
Sbjct: 921 DAALEYVESQGYLLAKHQYEHKYPYDWRSKLPIIIRATEQWFADVADIRGAAV 973
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 8/153 (5%)
Query: 1106 LNLITNQGKYS----PDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWR 1159
L + + G+++ PD L G ++LGEG D L VE +L Y+H YPYDWR
Sbjct: 889 LAPVDDHGRFTDLAMPDDPARLSGKSVLGEGNDAALEYVESQGYLLAKHQYEHKYPYDWR 948
Query: 1160 TKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVW 1219
+K P+I++A++QWF D I+ A+ LE VNFVP S ++ L + + R WCISRQR W
Sbjct: 949 SKLPIIIRATEQWFADVADIRGAAVKALEDVNFVPVSGRQRLENFVKNRSEWCISRQRAW 1008
Query: 1220 GVPIPVFYDGDT--IIVNEANIKHFCTLIDEHG 1250
GVPIP Y T ++ + + H ++IDE G
Sbjct: 1009 GVPIPALYHKGTGEAVLTKDTVSHIMSVIDERG 1041
>gi|254526098|ref|ZP_05138150.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
gi|221537522|gb|EEE39975.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
Length = 965
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/630 (35%), Positives = 342/630 (54%), Gaps = 54/630 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWS---------- 467
TALAE+ELEY DH SKSIY+ +K+ +VP +L + I + S
Sbjct: 204 TALAEAELEYPDDHYSKSIYVSLKITKVPDKVLLKGCQENPNIKKNSFLSNSFITIWTTT 263
Query: 468 ---LPANQFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
+PAN+ +A NP + Y + + + AK L + F +++ + G L++
Sbjct: 264 PWTIPANEAVAVNPKISYVFVIDEDKRIFLFAKNLFSEISEKFNKIFNILFEVKGSSLEN 323
Query: 524 ITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
I Y HP + ++ +++ G F+++ GTG+VH AP HG DDF + +P+ ++ +
Sbjct: 324 IEYHHPT--KNKNCRIVIGGDFITTESGTGIVHTAPGHGIDDFNVGQKYDLPITCVVDEK 381
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQ 640
G + +G +G N+L D D ++ ++ +L ENY+H YPYDWRTKKP I +A++
Sbjct: 382 GNLNEYSGQ-FKGSNVLKDANDLIIEYLKGKNLLLLQENYKHRYPYDWRTKKPTIFRATE 440
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--D 698
QWF + + AL +E+V ++P + KK + + R WCISRQR WGVPIPVFY +
Sbjct: 441 QWFASLDGFRSSALKAIEDVEWMPATGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYKKN 500
Query: 699 GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSG 756
G+ I++N I H L E+G D WW V+ LL N + K D +D+WFDSG
Sbjct: 501 GNEILLNSEIINHIQELFSEYGADIWWDWEVKNLLPENYLKESDLWEKGTDTMDVWFDSG 560
Query: 757 ISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
SW+ V + + PA +Y+EG DQ GWF SSLLTSVA+ + P++ V HGF +DE
Sbjct: 561 SSWAAVCEQRSELKYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKRVLTHGFALDEN 620
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA 871
G KMSKS+GNV+ + I G K PAYG DVLR WV+
Sbjct: 621 GRKMSKSLGNVVDPNIIINGG--------------------NNKKSEPAYGADVLRLWVS 660
Query: 872 AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYML 927
+ VPIG NIL D +K+R++ RYLLG +H++ + S +D +ML
Sbjct: 661 S-VDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFEIDQLPLLDQWML 719
Query: 928 KRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGL 987
RL E + + Y ++++R ++L +F V +LS FY + KDRLY + + R S
Sbjct: 720 GRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDRLYVSAKSQFRRRSCQ 779
Query: 988 HTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ + L ++P++ H+AE+++ ++P
Sbjct: 780 FVMSKVVENLAVLISPVLCHMAEDIWQNIP 809
Score = 295 bits (756), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 235/403 (58%), Gaps = 25/403 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANG+ H+GHA+NK+LKDI + L+G +VHYVPGWDCHGLPIELK
Sbjct: 56 NSGKTFTLHDGPPYANGSLHMGHALNKVLKDIINKYKTLKGFKVHYVPGWDCHGLPIELK 115
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + + K L+ L +RKKA ++A + IN Q F+ WG+ DW+ N Y T K Y
Sbjct: 116 VLQNLKSDERKNLNSLSLRKKATDYAHKQINNQMEGFKRWGIWGDWD-NPYLTLKKSYES 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F ++ YIYR LKPV+WSPSSRTALAE+ELEY DH SKSIY+ +K+ +VP
Sbjct: 175 AQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDDHYSKSIYVSLKITKVPDK 234
Query: 192 LLEGATDLHALIWTTTPWS-------------LPANQFIAFNPALEYSVASVKGANV-IV 237
+L + I + S +PAN+ +A NP + Y + + +
Sbjct: 235 VLLKGCQENPNIKKNSFLSNSFITIWTTTPWTIPANEAVAVNPKISYVFVIDEDKRIFLF 294
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGL 296
AK L + F ++ + G L++I Y HP + ++ +++ G F+++ GTG+
Sbjct: 295 AKNLFSEISEKFNKIFNILFEVKGSSLENIEYHHPT--KNKNCRIVIGGDFITTESGTGI 352
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP HG DDF + +P+ ++ +G + +G +G N+L D D ++ ++
Sbjct: 353 VHTAPGHGIDDFNVGQKYDLPITCVVDEKGNLNEYSGQ-FKGSNVLKDANDLIIEYLKGK 411
Query: 357 --VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L ENY+H YPYDWRTKKP I +A++QWF + + AL
Sbjct: 412 NLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASLDGFRSSAL 454
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Query: 1123 LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
+G N+L + D ++ ++ +L ENY+H YPYDWRTKKP I +A++QWF + +
Sbjct: 391 FKGSNVLKDANDLIIEYLKGKNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASLDGFR 450
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 1238
AL +E V ++P + KK + + R WCISRQR WGVPIPVFY +G+ I++N
Sbjct: 451 SSALKAIEDVEWMPATGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYKKNGNEILLNSEI 510
Query: 1239 IKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L E+G D WW V+ LL
Sbjct: 511 INHIQELFSEYGADIWWDWEVKNLL 535
>gi|74354080|gb|AAI02831.1| IARS2 protein [Bos taurus]
Length = 501
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 272/406 (66%), Gaps = 13/406 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G ++H
Sbjct: 90 KCGFSELYSWQRER-KVKAEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ K + LS ++IR+KA++FA I QK F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGGKAQNLSAMEIREKARSFAKAAIEKQKLSFIRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD Y QL FY +Y + IYR KPV+WSPSSRTALAE+ELEY P+H+S+
Sbjct: 209 -NNCYYTFDGRYEAKQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHISR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
S+Y+K L + A LL+G++ + L+WTT PW++PANQ + + P +Y+V S G
Sbjct: 268 SVYVKFPLLKPSPKLASLLDGSSPVSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSSSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+ V S+ T T EV+ F G L++ + HP+ E R+ LLPA V+ +K
Sbjct: 328 DLYILGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLISE-RESPLLPANHVTMTK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A + L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++ ++L E HSYPYDWRTKKPV+++AS+QWF++ IK A
Sbjct: 447 LQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIKTTA 492
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 151/243 (62%), Gaps = 8/243 (3%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+HIS+S+Y+K L + A LL+G++ + L+WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHISRSVYVKFPLLKPSPKLASLLDGSSPVSFLVWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+ V ++ T T +V+ F G L++ + HP+
Sbjct: 311 CYMPESKYAVVKCSSSGDLYILGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLIS 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
E R+ LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G ++ AGP
Sbjct: 371 E-RESPLLPANHVTMTKGTGLVHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++ IK
Sbjct: 430 LQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIK 489
Query: 651 PEA 653
A
Sbjct: 490 TTA 492
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 415 LVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKPVV 474
Query: 1166 LKASQQWFIDTERIKPEA 1183
++AS+QWF++ IK A
Sbjct: 475 IRASKQWFVNITDIKTTA 492
>gi|255955271|ref|XP_002568388.1| Pc21g13710 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590099|emb|CAP96268.1| Pc21g13710 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 995
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 343/645 (53%), Gaps = 56/645 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH S + +K L +P +LLE DL A+IWTTTPW+LPAN
Sbjct: 201 GTALAEAELEYKEDHTSTAALVKFPLVDIPKYLLENPLLRGKDLSAVIWTTTPWTLPANA 260
Query: 473 FIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA + +LEY++ S K ++++A+ E L+ + D+ V+ G L + T P+
Sbjct: 261 AIAVSESLEYTIVLSEKHGHLLIAQSRFEYLQNMLKEDLSVIVPSILGSELAEKTTYRPL 320
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K E + + A FV++ G+G+VHCAP HG DD+ LA IPV + ++GK++
Sbjct: 321 FKGPEAQPQPIFAADFVTADSGSGMVHCAPGHGMDDYEACLARGIPVFAPVNDEGKFTDK 380
Query: 589 AGP----GLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G +LG+G VL VE +L Y+H YPYDWR+K PVI++A++QW
Sbjct: 381 AMPLDPTRLTGKPVLGEGNTAVLEWVESCDQLLAQHKYEHKYPYDWRSKLPVIVRATEQW 440
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F D I+ AL LE+V FVPE+ K+ L + + R WCISRQR WGVPIP Y T
Sbjct: 441 FADVADIRSSALRALEDVRFVPETGKQRLENFVKNRSEWCISRQRAWGVPIPTIYHRTTG 500
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDS 755
++ + ++ H I+E D WW+ S + ++ + + D +D+WFDS
Sbjct: 501 EAVLTKDSVSHIMATIEEREIDAWWTDSADDAAWIPPSLRNEPGAGYRRGTDTMDVWFDS 560
Query: 756 GISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK-------HTAPFRNVFL 803
G SW+ + + PA VY+EG DQ GWF S LLT ++ + APF+N+
Sbjct: 561 GTSWAEIDVPMEGRSHPADVYLEGTDQHRGWFQSGLLTYISHQLGSGQSTPRAPFKNLIT 620
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL----P 859
HGF +DE G KMSKSVGNVI I G LP + G +G K+L P
Sbjct: 621 HGFTLDEYGRKMSKSVGNVIHPQTIMDGT-LLPPLKPRKG---------KGKKQLENPEP 670
Query: 860 AY---GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN-HSEST 915
Y G D LR W AA + V IG+ +L + + K R + + LLG L + H E+
Sbjct: 671 VYDALGPDALRMW-AASSDYTRDVVIGRQVLQTVNTSLHKFRVTFKLLLGALADFHPENV 729
Query: 916 ---GSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
G + + VD LK L + T F++ + + + E SAFY +KDR
Sbjct: 730 VPYGQL-QLVDRIALKHLSDMVLTSQKACDNFEFYKGVSTMNRWANLEFSAFYMEAIKDR 788
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
LY + +R + TL +++ L +API P L EE + + P
Sbjct: 789 LYTLGEDSTSRRAAQTTLFYVYNHLQEALAPITPVLVEETWEYTP 833
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/412 (45%), Positives = 249/412 (60%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQR F+LHDGPPYANG H+GHA+NKILKDI R L +GKRV YVPGW
Sbjct: 42 DLYAWQRRERPADQPFVLHDGPPYANGDLHVGHALNKILKDIICRVQLARGKRVRYVPGW 101
Query: 66 DCHGLPIELKAITS------KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ + +SP IR A+ A +T+ Q F + V+ADWE
Sbjct: 102 DCHGLPIELKALQGLRDADITSETVSPAVIRTSARKLARQTVKEQMKGFRGFAVMADWE- 160
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N + T DK++ QL F + + IYR KPVYWSPSS TALAE+ELEYK DH S +
Sbjct: 161 NHWKTMDKQFEMRQLGIFREMVDRGLIYRKFKPVYWSPSSGTALAEAELEYKEDHTSTAA 220
Query: 180 YLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGAN 234
+K L +P +LLE DL A+IWTTTPW+LPAN IA + +LEY++ S K +
Sbjct: 221 LVKFPLVDIPKYLLENPLLRGKDLSAVIWTTTPWTLPANAAIAVSESLEYTIVLSEKHGH 280
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
+++A+ E L+ + D+ V+ G L + T P+ K E + + A FV++
Sbjct: 281 LLIAQSRFEYLQNMLKEDLSVIVPSILGSELAEKTTYRPLFKGPEAQPQPIFAADFVTAD 340
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP----GLEGLNILGDGKD 347
G+G+VHCAP HG DD+ LA IPV + ++GK++ A P L G +LG+G
Sbjct: 341 SGSGMVHCAPGHGMDDYEACLARGIPVFAPVNDEGKFTDKAMPLDPTRLTGKPVLGEGNT 400
Query: 348 QVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+ AL
Sbjct: 401 AVLEWVESCDQLLAQHKYEHKYPYDWRSKLPVIVRATEQWFADVADIRSSAL 452
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 91/156 (58%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYSPDAGP----GLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKK 1162
+ ++GK++ A P L G +LGEG VL VE +L Y+H YPYDWR+K
Sbjct: 371 VNDEGKFTDKAMPLDPTRLTGKPVLGEGNTAVLEWVESCDQLLAQHKYEHKYPYDWRSKL 430
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ AL LE V FVPE+ K+ L + + R WCISRQR WGVP
Sbjct: 431 PVIVRATEQWFADVADIRSSALRALEDVRFVPETGKQRLENFVKNRSEWCISRQRAWGVP 490
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y T ++ + ++ H I+E D WW+
Sbjct: 491 IPTIYHRTTGEAVLTKDSVSHIMATIEEREIDAWWT 526
>gi|123967796|ref|YP_001008654.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
gi|166229756|sp|A2BP36.1|SYI_PROMS RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|123197906|gb|ABM69547.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
Length = 968
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/633 (35%), Positives = 346/633 (54%), Gaps = 60/633 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL----EGATDLHALIWTTTPWSLP---- 469
TALAE+ELEY +H SKSIY+ +K+ ++ +L + ++ + +
Sbjct: 204 TALAEAELEYPDEHYSKSIYISLKITKISEEILLNFVQENLNIKREFFENNSFITIWTTT 263
Query: 470 -----ANQFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
AN+ +A NP ++Y A + + + AK L + F D+ V+ + G L++
Sbjct: 264 PWTIPANEAVAVNPKIKYVFAIDEEKRIYLFAKDLSTEISNKFNKDLKVLLEVKGSQLEN 323
Query: 524 ITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
I Y HP + ++ +++ G ++++ GTG+VH AP HG DDF + +P+ ++ +
Sbjct: 324 IEYQHP--SKNKNCRIVIGGDYITTESGTGIVHTAPGHGVDDFNVGQKYDLPITCVVDEK 381
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQ 640
G + +G +G N+L D D ++ ++ + +L ENY+H YPYDWRTKKP I +A++
Sbjct: 382 GNLNEYSGQ-FQGSNVLKDANDLIIEYLKGNNLLLLQENYKHRYPYDWRTKKPTIFRATE 440
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--D 698
QWF + AL +E+V ++P + KK + + R WCISRQR WGVPIPVFY +
Sbjct: 441 QWFASVNGFRSSALQAIEDVEWMPATGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYKKN 500
Query: 699 GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWF 753
G+ I++N I H L EHG D WW V+ LL SD+ K D +D+WF
Sbjct: 501 GNDILLNSEIINHIQELFSEHGADIWWDWDVKNLLPEKYARESDL---WKKGTDTMDVWF 557
Query: 754 DSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVV 808
DSG SW+ V + + PA +Y+EG DQ GWF SSLLTSVA+ + P++ V HGF +
Sbjct: 558 DSGSSWAAVCELRSELKYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKKVLTHGFAL 617
Query: 809 DEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRW 868
DE G KMSKS+GNV+ + I G GN K PAYG DVLR
Sbjct: 618 DENGRKMSKSLGNVVDPNIIING-----------GN---------NKKTEPAYGADVLRL 657
Query: 869 WVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDV 924
WV++ VPIG NIL D +K+R++ RYLLG +H++ + S +D
Sbjct: 658 WVSS-VDYSVDVPIGSNILKQLADVYRKVRNTARYLLGNIHDYDPNIDSYEIDQLPLLDQ 716
Query: 925 YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARL 984
+ML RL E + + Y +++++ ++L +F V +LS FY + KDRLY S + R
Sbjct: 717 WMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYVSSKSQFRRR 776
Query: 985 SGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
S + + L ++P++ H+AE+++ ++P
Sbjct: 777 SCQFVMSKVVENLAVLISPVLCHMAEDIWQNIP 809
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 238/398 (59%), Gaps = 25/398 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
F LHDGPPYANG H+GHA+NK+LKDI + L+G RVHYVPGWDCHGLPIELK +
Sbjct: 61 FTLHDGPPYANGALHMGHALNKVLKDIINKYKTLRGFRVHYVPGWDCHGLPIELKVLQNL 120
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ + K L L++RKKA ++A IN Q F+ WG+ DW+ N Y T K Y Q+
Sbjct: 121 KSDERKNLDTLNLRKKATDYAHIQINNQMEGFKRWGIWGDWD-NPYLTLKKSYESAQIGV 179
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL--- 193
F ++ YIYR LKPV+WSPSSRTALAE+ELEY +H SKSIY+ +K+ ++ +L
Sbjct: 180 FGKMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDEHYSKSIYISLKITKISEEILLNF 239
Query: 194 -EGATDLHALIWTTTPW---------SLPANQFIAFNPALEYSVASVKGANV-IVAKCLV 242
+ ++ + + ++PAN+ +A NP ++Y A + + + AK L
Sbjct: 240 VQENLNIKREFFENNSFITIWTTTPWTIPANEAVAVNPKIKYVFAIDEEKRIYLFAKDLS 299
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAP 301
+ F D++V+ + G L++I Y HP + ++ +++ G ++++ GTG+VH AP
Sbjct: 300 TEISNKFNKDLKVLLEVKGSQLENIEYQHP--SKNKNCRIVIGGDYITTESGTGIVHTAP 357
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG DDF + +P+ ++ +G + +G +G N+L D D ++ ++ + +L
Sbjct: 358 GHGVDDFNVGQKYDLPITCVVDEKGNLNEYSGQ-FQGSNVLKDANDLIIEYLKGNNLLLL 416
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
ENY+H YPYDWRTKKP I +A++QWF + AL
Sbjct: 417 QENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSAL 454
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Query: 1123 LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
+G N+L + D ++ ++ + +L ENY+H YPYDWRTKKP I +A++QWF +
Sbjct: 391 FQGSNVLKDANDLIIEYLKGNNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFR 450
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 1238
AL +E V ++P + KK + + R WCISRQR WGVPIPVFY +G+ I++N
Sbjct: 451 SSALQAIEDVEWMPATGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYKKNGNDILLNSEI 510
Query: 1239 IKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L EHG D WW V+ LL
Sbjct: 511 INHIQELFSEHGADIWWDWDVKNLL 535
>gi|425773281|gb|EKV11642.1| Isoleucyl-tRNA synthetase, putative [Penicillium digitatum Pd1]
gi|425778928|gb|EKV17029.1| Isoleucyl-tRNA synthetase, putative [Penicillium digitatum PHI26]
Length = 997
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/643 (36%), Positives = 335/643 (52%), Gaps = 53/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEYK DHIS + ++ L +P HL E D+ A+IWTTTPW+LPAN
Sbjct: 202 TALAEAELEYKDDHISTAALVRFPLVDIPTHLSENPLLRGKDVSAVIWTTTPWTLPANAA 261
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPIN 531
IA + +LEY++ S K ++++A+ E L+ + D+ V+ G L + T P+
Sbjct: 262 IAVSESLEYTIVLSEKHGHLLIAQARFEYLQSMLKEDLSVIVPSILGSELAEQTTYRPLF 321
Query: 532 K--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K E + + A FV++ G+G+VHCAP HG DD+ LA IPV + ++G+++ A
Sbjct: 322 KGPEAQPQPIFAADFVTADSGSGMVHCAPGHGMDDYEACLARGIPVFAPVNDEGQFTDKA 381
Query: 590 GP----GLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
P L G +LG+G VL VE +L Y+H YPYDWR+K P+I++A++QWF
Sbjct: 382 MPLDPTRLAGKPVLGEGNTAVLEWVESCGQLLAQHKYEHKYPYDWRSKLPIIVRATEQWF 441
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
D I+ AL LE+V FVPE+ K L + + R WCISRQR WGVPIP Y T
Sbjct: 442 ADVADIRTSALRALEDVRFVPETGKHRLENFVKNRSEWCISRQRAWGVPIPAIYHRTTGE 501
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSG 756
++ + ++ H I+E G D WW+ S + + + + D +D+WFDSG
Sbjct: 502 AVLTKDSVSHIMATIEERGIDAWWTDSADDAAWIPPSLRDEAGAGYRRGTDTMDVWFDSG 561
Query: 757 ISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKH--------TAPFRNVFL 803
SW+ + + PA VY+EG DQ GWF S LLT ++ +H APF+N+
Sbjct: 562 TSWAEIDVPMEGRSHPADVYLEGTDQHRGWFQSGLLTYISHQHGSGQSTTPGAPFKNLIT 621
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAY-EKSVGNVISAHDITQGAKKLPAY- 861
HGF +DE G KMSKS+GNV+ I G P KS G Q + P Y
Sbjct: 622 HGFTLDEHGRKMSKSIGNVMYPQTIMDGTLLPPLKPRKSKGK-------KQPENQEPVYD 674
Query: 862 --GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS 919
G D LR W AA + V IGK +L + + K R + + LLG L + G+I
Sbjct: 675 ALGPDALRMW-AASSDYTRDVVIGKQVLQTVNTSLHKFRVTFKLLLGALADF--HPGNIV 731
Query: 920 RY-----VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
Y VD LK L + F++ + + + E SAFY +KDRLY
Sbjct: 732 PYGRLQLVDRIALKHLSDMVLASQKACDNFEFYKGVSTMNRWANLEFSAFYMEAIKDRLY 791
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ +R + TL I++ L + PI P L EE + H P
Sbjct: 792 TLGEDSTSRRAAQTTLFYIYNHLQEALGPITPVLVEETWEHTP 834
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/412 (43%), Positives = 246/412 (59%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQR F+LHDGPPYANG H+GHA+NKILKDI R L +GKRV YVPGW
Sbjct: 42 DLYAWQRRERPADQPFVLHDGPPYANGDLHVGHALNKILKDIICRIQLGRGKRVRYVPGW 101
Query: 66 DCHGLPIELKAITS------KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ +S IR A+ A +T+ Q F V+ADWE
Sbjct: 102 DCHGLPIELKALQGLRNEDLASGSVSAAVIRTSARKLARQTVKEQMKVFRGCAVMADWE- 160
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N + T DK++ QL F + + IYR KPVYWSPS+ TALAE+ELEYK DH+S +
Sbjct: 161 NHWKTMDKQFEMRQLGIFRGMVDRGLIYRKFKPVYWSPSTSTALAEAELEYKDDHISTAA 220
Query: 180 YLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGAN 234
++ L +P HL E D+ A+IWTTTPW+LPAN IA + +LEY++ S K +
Sbjct: 221 LVRFPLVDIPTHLSENPLLRGKDVSAVIWTTTPWTLPANAAIAVSESLEYTIVLSEKHGH 280
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
+++A+ E L+ + D+ V+ G L + T P+ K E + + A FV++
Sbjct: 281 LLIAQARFEYLQSMLKEDLSVIVPSILGSELAEQTTYRPLFKGPEAQPQPIFAADFVTAD 340
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP----GLEGLNILGDGKD 347
G+G+VHCAP HG DD+ LA IPV + ++G+++ A P L G +LG+G
Sbjct: 341 SGSGMVHCAPGHGMDDYEACLARGIPVFAPVNDEGQFTDKAMPLDPTRLAGKPVLGEGNT 400
Query: 348 QVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VL VE +L Y+H YPYDWR+K P+I++A++QWF D I+ AL
Sbjct: 401 AVLEWVESCGQLLAQHKYEHKYPYDWRSKLPIIVRATEQWFADVADIRTSAL 452
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYSPDAGP----GLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKK 1162
+ ++G+++ A P L G +LGEG VL VE +L Y+H YPYDWR+K
Sbjct: 371 VNDEGQFTDKAMPLDPTRLAGKPVLGEGNTAVLEWVESCGQLLAQHKYEHKYPYDWRSKL 430
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ AL LE V FVPE+ K L + + R WCISRQR WGVP
Sbjct: 431 PIIVRATEQWFADVADIRTSALRALEDVRFVPETGKHRLENFVKNRSEWCISRQRAWGVP 490
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y T ++ + ++ H I+E G D WW+
Sbjct: 491 IPAIYHRTTGEAVLTKDSVSHIMATIEERGIDAWWT 526
>gi|440633620|gb|ELR03539.1| isoleucyl-tRNA synthetase [Geomyces destructans 20631-21]
Length = 956
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/631 (37%), Positives = 341/631 (54%), Gaps = 45/631 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE---GATDLHALIWTTTPWSLPANQFI 474
+ALAE+ELEY H S + Y+K ++ VPA L A LHA+IWTTTPW+LPAN+ I
Sbjct: 200 SALAEAELEYNEAHESITAYIKFQVVAVPAALKGQGVNAGRLHAVIWTTTPWTLPANKAI 259
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCD-FPGQYLQDITYIHPIN 531
A +P LEY+V V +++AK +E++ K F VV + G L+ +TY++ ++
Sbjct: 260 AVSPDLEYTVVEVGSEQLLIAKSRLEHVAAKCAFPESFKVVVESIKGSELEGLTYVNALH 319
Query: 532 KEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
E ++ L+ A +VS + G+GLVH AP HG +D+ + I + + G ++ +A
Sbjct: 320 GENAPIQPLIFADYVSDASGSGLVHTAPGHGMEDYDVCTKLGIEASAPVDDAGCFTDEAL 379
Query: 591 P----GLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
P L G ++LG G + VL L+ VL ++H YPYDWRTK PVI++A++QWF D
Sbjct: 380 PHNPSALTGKSVLGGGNEAVLALLGFQVLGVHKHEHKYPYDWRTKLPVIVRATEQWFADV 439
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIV 704
IK +AL L+ V F+PE+++ L I R WCISRQR WGVPIP FYD G I+
Sbjct: 440 GSIKDKALKSLDNVKFIPENSRSRLESFIKGRSEWCISRQRAWGVPIPAFYDESGKAILT 499
Query: 705 NEANIKHFCTLIDEHGPDFWWSLS---VEQLLNTSDVNSNVTKSNDILDIWFDSGISWSH 761
E ++ H ++I E G D WW+ + V + + + + D +D+WFDSG SW+
Sbjct: 500 QE-SVSHIISVIQERGIDSWWTDAQDDVSWVPPSLRDQGTLKRGTDTMDVWFDSGSSWTQ 558
Query: 762 VLKDKPAHVYMEGMDQINGWFMSSLLTSVALK--HTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA VY EG DQ GWF SSLLT ++ +APF+ + HGF +DE G KMSKS+
Sbjct: 559 T--EGPAEVYSEGTDQHRGWFQSSLLTHISASGLDSAPFKTLVSHGFTIDEHGKKMSKSI 616
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVIS +I G P K A+D G D LR WV AS D T
Sbjct: 617 GNVISPAEIMNGTLLPPIKRKGKATGPPAYD---------GLGADALRLWV---ASSDYT 664
Query: 880 --VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTM 937
V + + + + + K R++L+ LLG + SE +D L +L + Q
Sbjct: 665 HDVALRQPVFKAINSTLLKYRTTLKMLLGSMRESSEKVQLTK--LDTIALYQLQQTQIGF 722
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ + + +A +L ++ ELS+FY +KDRLYC + G L+ IF L
Sbjct: 723 NEACRAYNFHKAISILNRWINAELSSFYLEAIKDRLYCGNGGG--------VLYPIFMGL 774
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
+ + PI P L EE + H P +S H
Sbjct: 775 MHMLGPITPSLVEESWEHRPQWMKDSTSSVH 805
Score = 349 bits (896), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 187/418 (44%), Positives = 265/418 (63%), Gaps = 21/418 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQ + + F+LHDGPPYANG+ H GHAVNKILKD+ R+ L QG+RV +VPGW
Sbjct: 39 DLYAWQAKVRAHQKPFVLHDGPPYANGSLHAGHAVNKILKDLICRTELQQGRRVQFVPGW 98
Query: 66 DCHGLPIELKAI-----TSKDKL--LSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
DCHGLPIE+KA+ S+D L P+ IR+ A+N A +T+ QK F WG++ADWE
Sbjct: 99 DCHGLPIEIKALEQVRAKSEDGEVNLDPIGIRRAARNLARKTVKEQKKGFREWGIMADWE 158
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N + T DKE+ QL F + +Q I+R KPVYWSPSS++ALAE+ELEY H S +
Sbjct: 159 -NPWVTMDKEFELKQLGVFLEMTRQGLIFRRYKPVYWSPSSKSALAEAELEYNEAHESIT 217
Query: 179 IYLKIKLNQVPAHLLE---GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV 235
Y+K ++ VPA L A LHA+IWTTTPW+LPAN+ IA +P LEY+V V +
Sbjct: 218 AYIKFQVVAVPAALKGQGVNAGRLHAVIWTTTPWTLPANKAIAVSPDLEYTVVEVGSEQL 277
Query: 236 IVAKCLVE--SLKWTFQTDIEVVCD-FPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSS 291
++AK +E + K F +VV + G L+ +TY++ ++ E ++ L+ A +VS +
Sbjct: 278 LIAKSRLEHVAAKCAFPESFKVVVESIKGSELEGLTYVNALHGENAPIQPLIFADYVSDA 337
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP----GLEGLNILGDGKD 347
G+GLVH AP HG +D+ + I + + G ++ +A P L G ++LG G +
Sbjct: 338 SGSGLVHTAPGHGMEDYDVCTKLGIEASAPVDDAGCFTDEALPHNPSALTGKSVLGGGNE 397
Query: 348 QVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
VL L+ VL ++H YPYDWRTK PVI++A++QWF D IK +AL K++ N+
Sbjct: 398 AVLALLGFQVLGVHKHEHKYPYDWRTKLPVIVRATEQWFADVGSIKDKAL--KSLDNV 453
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 95/154 (61%), Gaps = 7/154 (4%)
Query: 1109 ITNQGKYSPDAGP----GLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ + G ++ +A P L G ++LG G + VL L+ VL ++H YPYDWRTK PV
Sbjct: 368 VDDAGCFTDEALPHNPSALTGKSVLGGGNEAVLALLGFQVLGVHKHEHKYPYDWRTKLPV 427
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A++QWF D IK +AL L+ V F+PE+++ L I R WCISRQR WGVPIP
Sbjct: 428 IVRATEQWFADVGSIKDKALKSLDNVKFIPENSRSRLESFIKGRSEWCISRQRAWGVPIP 487
Query: 1225 VFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
FYD G I+ E ++ H ++I E G D WW+
Sbjct: 488 AFYDESGKAILTQE-SVSHIISVIQERGIDSWWT 520
>gi|388579129|gb|EIM19457.1| isoleucyl-tRNA synthetase [Wallemia sebi CBS 633.66]
Length = 882
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/651 (36%), Positives = 343/651 (52%), Gaps = 76/651 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAF 476
TALAESELEY +H+S S+Y+ L L + D++ L WTTTPWSL N +
Sbjct: 127 TALAESELEYNDNHVSDSVYISFPLTTASEKLQQLDVKDVNLLCWTTTPWSLVGNMGVCV 186
Query: 477 NPALEYSVAS--VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI---N 531
+P LEY + G ++A +E + +I + G L TY P N
Sbjct: 187 HPDLEYVIVEQLSSGNKYLIATERLEAMGEIL-GEIKQLATISGIDLAGSTYTPPFHAQN 245
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE-------------------- 571
++ A VS+ GTGLVH A AHG DD++ E
Sbjct: 246 AAATSFPIITAKHVSADTGTGLVHTAAAHGHDDYIAVQQESKANKGVNDDNLHASISQSV 305
Query: 572 KIPVLNLITNQGKYSP---------DAGPGLEGLNILGDGKDQVLHLVEPDVLW---TEN 619
P+LN + +QG++ D G L+GL+ LG+G +++L+E W E
Sbjct: 306 NTPILNPVDHQGRFDSEQVRRICGQDDGSALDGLDCLGEGSKVIINLLESRGGWIVAKEK 365
Query: 620 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRP 679
+H YPYDWRTKKPV+++A+ QWF + +++K ++ LE+VNF+P S + L I R
Sbjct: 366 VKHRYPYDWRTKKPVLIRATSQWFANVDKLKERSIKALEDVNFIPSSGRHRLESFILGRS 425
Query: 680 YWCISRQRVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSD 737
WCISRQR WGVPIP+ +D T ++++ I+H ++ E G + WW+ + L
Sbjct: 426 EWCISRQRAWGVPIPIIFDAATKEPLLDDEVIEHTLKVLSERGTNAWWTDPAKDFL-PDG 484
Query: 738 VNSNVTKSNDILDIWFDSGISWSHVLK--DKP-AHVYMEGMDQINGWFMSSLLTSVALKH 794
++ +V K D +D+WFDSG SW + K KP A VY+EG DQ GWF SSLLT+VA
Sbjct: 485 IDKDVVKGLDTMDVWFDSGTSWMCLDKRVGKPRADVYLEGSDQHRGWFQSSLLTAVAAGE 544
Query: 795 TAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQG 854
AP++ + HG VVDE G KMSKS+GN +S D I G
Sbjct: 545 GAPYKTLITHGMVVDELGRKMSKSLGNGLSPLD-----------------------IING 581
Query: 855 AKKLPAYGVDVLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSE 913
K +P YG+DVLR+W A+ +KD VPIG I+ + D ++KIR++ R++LG L
Sbjct: 582 TKSMPKYGIDVLRFWAASVEYTKD--VPIGPTIIAQASDSLKKIRNAARFILGNLKAGEV 639
Query: 914 STGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLV 969
S+ ++ +D +ML +L F+ Y + +++ + LLNF L A YF +
Sbjct: 640 SSTLLNEKELPLIDRWMLNQLHIFEKACRQAYDQHIFSKVVQTLLNFTSGPL-ATYFEIT 698
Query: 970 KDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQ 1020
KD LY DS N +RL ++ L +L ++VAPI P+L+EE+ H S +
Sbjct: 699 KDCLYNDSPNSHSRLQHIYVLQKTLDLLTKSVAPITPYLSEELNRHNKSTE 749
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 216/402 (53%), Gaps = 42/402 (10%)
Query: 36 IGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKN 95
+ H + ILKDI R NLL ++ Y PGWDCHGLPIELK++ SK K PL +R AK
Sbjct: 1 MDHPMLTILKDIITRYNLLANNQIDYRPGWDCHGLPIELKSL-SKLKTRDPLAVRTSAKQ 59
Query: 96 FALETINTQKAEFESWGVLADW--EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPV 153
AL+ I+ QK EF +G+LAD + Y T D +Y QL F L KQ I+R KPV
Sbjct: 60 TALDGIDLQKREFNQFGLLADLYDSQSTYRTLDLDYELRQLRLFSQLLKQGLIFRAFKPV 119
Query: 154 YWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE-GATDLHALIWTTTPWSLP 212
YWSPSS+TALAESELEY +HVS S+Y+ L L + D++ L WTTTPWSL
Sbjct: 120 YWSPSSQTALAESELEYNDNHVSDSVYISFPLTTASEKLQQLDVKDVNLLCWTTTPWSLV 179
Query: 213 ANQFIAFNPALEYSVAS--VKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYI 270
N + +P LEY + G ++A +E++ +I+ + G L TY
Sbjct: 180 GNMGVCVHPDLEYVIVEQLSSGNKYLIATERLEAMGEIL-GEIKQLATISGIDLAGSTYT 238
Query: 271 HPI---NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE------------- 314
P N ++ A VS+ GTGLVH A AHG DD++ E
Sbjct: 239 PPFHAQNAAATSFPIITAKHVSADTGTGLVHTAAAHGHDDYIAVQQESKANKGVNDDNLH 298
Query: 315 -------KIPVLNLITNQGKYSP---------DAGPGLEGLNILGDGKDQVLHLVEPDVL 358
P+LN + +QG++ D G L+GL+ LG+G +++L+E
Sbjct: 299 ASISQSVNTPILNPVDHQGRFDSEQVRRICGQDDGSALDGLDCLGEGSKVIINLLESRGG 358
Query: 359 W---TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
W E +H YPYDWRTKKPV+++A+ QWF + +++K ++
Sbjct: 359 WIVAKEKVKHRYPYDWRTKKPVLIRATSQWFANVDKLKERSI 400
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 14/172 (8%)
Query: 1106 LNLITNQGKYSP---------DAGPGLEGLNILGEGKDQVLHLVEPDVLW---TENYQHS 1153
LN + +QG++ D G L+GL+ LGEG +++L+E W E +H
Sbjct: 310 LNPVDHQGRFDSEQVRRICGQDDGSALDGLDCLGEGSKVIINLLESRGGWIVAKEKVKHR 369
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YPYDWRTKKPV+++A+ QWF + +++K ++ LE VNF+P S + L I R WCI
Sbjct: 370 YPYDWRTKKPVLIRATSQWFANVDKLKERSIKALEDVNFIPSSGRHRLESFILGRSEWCI 429
Query: 1214 SRQRVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQR WGVPIP+ +D T ++++ I+H ++ E G + WW+ P + L
Sbjct: 430 SRQRAWGVPIPIIFDAATKEPLLDDEVIEHTLKVLSERGTNAWWTDPAKDFL 481
Score = 43.1 bits (100), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 1039 IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQ 1091
I K LY DS N +RL ++ L +L ++VAPI P+L+EE+ H S +
Sbjct: 697 ITKDCLYNDSPNSHSRLQHIYVLQKTLDLLTKSVAPITPYLSEELNRHNKSTE 749
>gi|367051837|ref|XP_003656297.1| hypothetical protein THITE_2120730 [Thielavia terrestris NRRL 8126]
gi|347003562|gb|AEO69961.1| hypothetical protein THITE_2120730 [Thielavia terrestris NRRL 8126]
Length = 897
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/634 (36%), Positives = 345/634 (54%), Gaps = 57/634 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEG-ATDLHALIWTTTPWSLPANQF 473
GTALAE+ELEY H+S++ Y++ ++ L +EG L A++WTTTPW+LPAN+
Sbjct: 114 GTALAEAELEYNEAHVSRAAYVRFRVVDGYGALPGMEGFEGRLFAVVWTTTPWTLPANRA 173
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDI---DVVCDFPGQYLQDITYIHPI 530
IA + L Y + V +VA+ +E + + +VV G L + Y++ +
Sbjct: 174 IAVHEDLAYHIVRVGADAFLVAENCLERVAKVLGGETAAPEVVGTVKGSQLTQLRYVNLL 233
Query: 531 NKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
+ +L+ + FV+ G+GLVHCAP HG DD+L L+ IPV + N G ++ +A
Sbjct: 234 RGKSAELQPFIHGSFVTEGSGSGLVHCAPGHGFDDYLACLSLGIPVSAPVDNDGLFTEEA 293
Query: 590 GPG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
P L+G+++L G VL L+ DVL Y+H YPYDWRTK+P+I++A+ QWF D
Sbjct: 294 YPDQPDRLKGISVLDGGSAAVLELLGDDVLDVHEYRHKYPYDWRTKQPIIIRATAQWFAD 353
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTII 703
+ IK EALA ++EV FVPE K L + R WCISRQR WGVPIP Y+ GD ++
Sbjct: 354 VDTIKQEALAAIDEVRFVPEHGKNRLEAFVRGRSEWCISRQRAWGVPIPALYEPNGDAVM 413
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNSNVTKSNDILDIWFDSGISWS 760
+E I H ++I E G D WW+ + + + ++ D +D+WFDSG SW+
Sbjct: 414 TDEV-IDHIISVIQERGTDAWWTDPADDPAWIPEPLRGKTEYSRGLDTMDVWFDSGTSWT 472
Query: 761 HVLKDKPAHVYMEGMDQINGWFMSSLLTSVAL--KHTA----------PFRNVFLHGFVV 808
+ ++ A +Y+EG DQ GWF SSLLT VA H+A PF+ + HGF +
Sbjct: 473 --MMNRQADLYLEGSDQHRGWFQSSLLTRVAAMGDHSAKSTTNTLGLSPFKTLITHGFTL 530
Query: 809 DEKGAKMSKSVGNVISAHDITQGA--KKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVL 866
D+ G KMSKS+GN+ISA + G+ L A +K N D A G D L
Sbjct: 531 DQDGKKMSKSLGNIISADQVMDGSLLPPLKAKKKGGNNTPPVKD---------ALGPDAL 581
Query: 867 RWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV 924
R WV AS D T + +G+ +L + + K R++++ L G +H + + + VD
Sbjct: 582 RLWV---ASSDYTGDIVLGEPVLKTIHQALLKYRTTIKMLTGSMHASARTAPLTA--VDQ 636
Query: 925 YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARL 984
L +L + + Y +++ +A L ++ N+LSAFY +KDRLYC G
Sbjct: 637 IALLQLRDVMAEVGAHYDAYEFNKAFGCLNRWLTNDLSAFYLEALKDRLYCADGGG---- 692
Query: 985 SGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
L IF LLR +AP+ P L EE + H P+
Sbjct: 693 ----ALEPIFVGLLRMLAPLTPVLVEEAWEHRPA 722
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 218/365 (59%), Gaps = 13/365 (3%)
Query: 47 ITLRSNLLQGKRVHYVPGWDCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQK 105
+ LR + QG+RV YVPGWDCHGLPIELKA+ ++ K +SP IRK A+ A +T+ Q
Sbjct: 1 MILRVKVQQGRRVSYVPGWDCHGLPIELKAVGAAEGKRMSPGAIRKAARELAAKTVLEQM 60
Query: 106 AEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAE 165
F ++ V+ADW+ + T D Y QL F + ++ +YR KPVYWSPSS TALAE
Sbjct: 61 QSFRTYAVMADWDAR-WTTMDTAYEIRQLRLFQRMARRGLVYRRYKPVYWSPSSGTALAE 119
Query: 166 SELEYKPDHVSKSIYLKIKLNQVPAHL--LEG-ATDLHALIWTTTPWSLPANQFIAFNPA 222
+ELEY HVS++ Y++ ++ L +EG L A++WTTTPW+LPAN+ IA +
Sbjct: 120 AELEYNEAHVSRAAYVRFRVVDGYGALPGMEGFEGRLFAVVWTTTPWTLPANRAIAVHED 179
Query: 223 LEYSVASVKGANVIVAKCLVESLKWTFQTDI---EVVCDFPGQYLQDITYIHPINKEQRD 279
L Y + V +VA+ +E + + EVV G L + Y++ + + +
Sbjct: 180 LAYHIVRVGADAFLVAENCLERVAKVLGGETAAPEVVGTVKGSQLTQLRYVNLLRGKSAE 239
Query: 280 LK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG--- 335
L+ + FV+ G+GLVHCAP HG DD+L L+ IPV + N G ++ +A P
Sbjct: 240 LQPFIHGSFVTEGSGSGLVHCAPGHGFDDYLACLSLGIPVSAPVDNDGLFTEEAYPDQPD 299
Query: 336 -LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 394
L+G+++L G VL L+ DVL Y+H YPYDWRTK+P+I++A+ QWF D + IK
Sbjct: 300 RLKGISVLDGGSAAVLELLGDDVLDVHEYRHKYPYDWRTKQPIIIRATAQWFADVDTIKQ 359
Query: 395 EALVC 399
EAL
Sbjct: 360 EALAA 364
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 98/158 (62%), Gaps = 7/158 (4%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ N G ++ +A P L+G+++L G VL L+ DVL Y+H YPYDWRTK+P+
Sbjct: 283 VDNDGLFTEEAYPDQPDRLKGISVLDGGSAAVLELLGDDVLDVHEYRHKYPYDWRTKQPI 342
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D + IK EALA ++ V FVPE K L + R WCISRQR WGVPIP
Sbjct: 343 IIRATAQWFADVDTIKQEALAAIDEVRFVPEHGKNRLEAFVRGRSEWCISRQRAWGVPIP 402
Query: 1225 VFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
Y+ GD ++ +E I H ++I E G D WW+ P +
Sbjct: 403 ALYEPNGDAVMTDEV-IDHIISVIQERGTDAWWTDPAD 439
>gi|78778625|ref|YP_396737.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
gi|123554705|sp|Q31CU4.1|SYI_PROM9 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|78712124|gb|ABB49301.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
Length = 968
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/639 (35%), Positives = 346/639 (54%), Gaps = 54/639 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL----EGATDLHALIWTTTPWSLP---- 469
TALAE+ELEY +H SKSIY+ +K+ ++ +L + + + + +
Sbjct: 204 TALAEAELEYPDEHYSKSIYVSLKITKLSDEILLKFYQENPNFKKDFFLSNSFITIWTTT 263
Query: 470 -----ANQFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
AN+ +A NP + Y A + + ++AK L + F D+ + + G L+D
Sbjct: 264 PWTIPANEAVAVNPKINYVFAIDEEKRIYLLAKELSSEISNKFNKDLTTLLEVKGVTLED 323
Query: 524 ITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
I Y HP + ++ +++ G +++ GTG+VH AP HG DDF + +P ++ +
Sbjct: 324 IEYQHPT--KNKNCRIVIGGDYITIESGTGIVHTAPGHGIDDFNVGRKYDLPTTCVVDEK 381
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQ 640
G + +G +G N+L D D ++ +L E D+L ENY+H YPYDWRTKKP I +A++
Sbjct: 382 GNLNEYSGQ-FQGSNVLKDANDLIIDYLEEKDLLLLQENYKHRYPYDWRTKKPTIFRATE 440
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--D 698
QWF + AL +E+V ++P + KK + + R WCISRQR WG+PIPVFY +
Sbjct: 441 QWFASVNGFRSSALKAIEDVEWIPATGKKRIYSMVVGRGDWCISRQRSWGLPIPVFYKKN 500
Query: 699 GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--TKSNDILDIWFDSG 756
G+ I++N I H L EHG D WW V+ LL + V + K D +D+WFDSG
Sbjct: 501 GNEILLNSEIINHIQKLFSEHGADIWWDWDVKHLLPDNYVKESDLWKKGTDTMDVWFDSG 560
Query: 757 ISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
SW+ V + + PA +Y+EG DQ GWF SSLLTSVA+ + P++ V HGF +DE
Sbjct: 561 SSWAAVCEQRSELKYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKKVLTHGFALDEN 620
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA 871
G KMSKS+GNV+ + I G GN K PAYG DVLR WV+
Sbjct: 621 GRKMSKSLGNVVDPNIIING-----------GN---------NKKIEPAYGADVLRLWVS 660
Query: 872 AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYML 927
+ VPIG NIL D +K+R++ RYLLG +H++ + S +D +ML
Sbjct: 661 S-VDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFEIDQLPLLDQWML 719
Query: 928 KRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGL 987
RL E + + Y +++++ ++L +F V +LS FY + KDRLY S + R S
Sbjct: 720 GRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYVSSKSQFRRRSCQ 779
Query: 988 HTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ + L ++P++ H+AE+++ ++P S F
Sbjct: 780 FVMSKVVENLAVLISPVLCHMAEDIWQNVPYSTKEKSVF 818
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 236/398 (59%), Gaps = 25/398 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
F LHDGPPYANG H+GHA+NK+LKDI + L+G RVHYVPGWDCHGLPIELK +
Sbjct: 61 FTLHDGPPYANGALHMGHALNKVLKDIINKYKTLRGFRVHYVPGWDCHGLPIELKVLQNL 120
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+S+ K L L++RKKA ++A IN Q F+ WG+ +W+ N Y T K Y Q+
Sbjct: 121 KSSERKNLDTLNLRKKATDYAYVQINNQMEGFKRWGIWGNWD-NPYLTLKKSYESAQIGV 179
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL--- 193
F ++ YIYR LKPV+WSPSSRTALAE+ELEY +H SKSIY+ +K+ ++ +L
Sbjct: 180 FGKMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDEHYSKSIYVSLKITKLSDEILLKF 239
Query: 194 -EGATDLHALIWTTTPW---------SLPANQFIAFNPALEYSVASVKGANV-IVAKCLV 242
+ + + + + ++PAN+ +A NP + Y A + + ++AK L
Sbjct: 240 YQENPNFKKDFFLSNSFITIWTTTPWTIPANEAVAVNPKINYVFAIDEEKRIYLLAKELS 299
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAP 301
+ F D+ + + G L+DI Y HP + ++ +++ G +++ GTG+VH AP
Sbjct: 300 SEISNKFNKDLTTLLEVKGVTLEDIEYQHPT--KNKNCRIVIGGDYITIESGTGIVHTAP 357
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL-HLVEPD-VLW 359
HG DDF + +P ++ +G + +G +G N+L D D ++ +L E D +L
Sbjct: 358 GHGIDDFNVGRKYDLPTTCVVDEKGNLNEYSGQ-FQGSNVLKDANDLIIDYLEEKDLLLL 416
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
ENY+H YPYDWRTKKP I +A++QWF + AL
Sbjct: 417 QENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSAL 454
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 1123 LEGLNILGEGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
+G N+L + D ++ +L E D+L ENY+H YPYDWRTKKP I +A++QWF +
Sbjct: 391 FQGSNVLKDANDLIIDYLEEKDLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFR 450
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 1238
AL +E V ++P + KK + + R WCISRQR WG+PIPVFY +G+ I++N
Sbjct: 451 SSALKAIEDVEWIPATGKKRIYSMVVGRGDWCISRQRSWGLPIPVFYKKNGNEILLNSEI 510
Query: 1239 IKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L EHG D WW V+ LL
Sbjct: 511 INHIQKLFSEHGADIWWDWDVKHLL 535
>gi|336463905|gb|EGO52145.1| hypothetical protein NEUTE1DRAFT_125685 [Neurospora tetrasperma FGSC
2508]
Length = 962
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/642 (37%), Positives = 336/642 (52%), Gaps = 50/642 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGAT-DLHALIWTTTPWSLPANQF 473
GTALAE+ELEY HISKS Y++ + + A + LEG T +L+A+IWTTTPW+LPAN+
Sbjct: 189 GTALAEAELEYNEAHISKSAYVRFPITKDSARIPGLEGFTGNLYAVIWTTTPWTLPANRA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD---IDVVCDFPGQYLQDITYIHPI 530
IA + L Y V +VA +E + + +++ PG L + Y++P+
Sbjct: 249 IAVHDDLLYHAVRVGDDAYLVADGGLERVAKVLMGEEGTPEILATVPGSQLTQLQYVNPL 308
Query: 531 -NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K + FV+ G+GLVHCAP HG DD+LL IPV + N G ++ +A
Sbjct: 309 QGKSAAPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLLCKDLGIPVSAPVDNDGIFTEEA 368
Query: 590 GPG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
P L+G+ +L G VL L + +VL Y+H YPYDWRTKKP+I++A+ QWF D
Sbjct: 369 YPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHKYKHKYPYDWRTKKPIIIRATAQWFAD 428
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTII 703
+ IK AL LEEV FVPES + L + R WCISRQR WGVPIP YD GD ++
Sbjct: 429 VDNIKELALKALEEVKFVPESGRSRLEAFVKGRSEWCISRQRAWGVPIPALYDANGDAVM 488
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNSNVTKSNDILDIWFDSGISWS 760
E I+H ++I E G D WWS + + T+ D +D+WFDSG SW+
Sbjct: 489 -TEKTIEHIISVIQERGTDAWWSDDPHDPVWIPASLRGKGPFTRGRDTMDVWFDSGSSWT 547
Query: 761 HVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT--------------APFRNVFLHGF 806
D+ A VY+EG DQ GWF SSLLT VA +PF+ + HGF
Sbjct: 548 QT--DRQADVYLEGSDQHRGWFQSSLLTRVAAMAVQGPTADGTTNAVGLSPFKTLITHGF 605
Query: 807 VVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVL 866
+D+ G KMSKS+GN+ISA + G+ P K+ +A A G D L
Sbjct: 606 TLDKAGKKMSKSLGNIISADQVMDGSLLPPLKVKNKDRDPNAPPPKD------ALGPDAL 659
Query: 867 RWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYM 926
R WVA+ V +G+ +L + + K R+ ++ L G + + + + +D
Sbjct: 660 RLWVASSDYTSDIV-LGEPVLKTIHQSLTKYRTIIKMLTGSMEQSARAAPLTA--LDHIA 716
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L +L + ++ Y +++ +A L ++ N+LSAFY +KDRLYC G
Sbjct: 717 LVQLKDAMAEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKDRLYCADGGG------ 770
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
L IF LR +API P L EE + H P+ S H
Sbjct: 771 --VLEPIFMGFLRMLAPITPVLVEEAWEHRPAWMKEDPSILH 810
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/404 (44%), Positives = 249/404 (61%), Gaps = 13/404 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+ Y WQ F+LHDGPPYANG+ H GHA+NKILKDI +R+ + QG+RV YVPGW
Sbjct: 35 DFYKWQAANRPADDTFLLHDGPPYANGSLHAGHALNKILKDIIIRTKVQQGQRVTYVPGW 94
Query: 66 DCHGLPIELKAITSKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIELKA+++++ + ++P IR+ A++ A +T+ Q F ++ V++DWE N + T
Sbjct: 95 DCHGLPIELKAVSTEEGRTMTPHAIRQAARSLAAKTVLEQMDSFRTYAVMSDWE-NRWTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D + NQL F + + IYR KPVYWSPSS TALAE+ELEY H+SKS Y++
Sbjct: 154 MDMAFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAEAELEYNEAHISKSAYVRFP 213
Query: 185 LNQVPAHL--LEGAT-DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + A + LEG T +L+A+IWTTTPW+LPAN+ IA + L Y V +VA
Sbjct: 214 ITKDSARIPGLEGFTGNLYAVIWTTTPWTLPANRAIAVHDDLLYHAVRVGDDAYLVADGG 273
Query: 242 VESLKWTFQTD---IEVVCDFPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLV 297
+E + + E++ PG L + Y++P+ K + FV+ G+GLV
Sbjct: 274 LERVAKVLMGEEGTPEILATVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLV 333
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVLHLV 353
HCAP HG DD+LL IPV + N G ++ +A P L+G+ +L G VL L
Sbjct: 334 HCAPGHGFDDYLLCKDLGIPVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELF 393
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +VL Y+H YPYDWRTKKP+I++A+ QWF D + IK AL
Sbjct: 394 KDNVLNVHKYKHKYPYDWRTKKPIIIRATAQWFADVDNIKELAL 437
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ N G ++ +A P L+G+ +L G VL L + +VL Y+H YPYDWRTKKP+
Sbjct: 358 VDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHKYKHKYPYDWRTKKPI 417
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D + IK AL LE V FVPES + L + R WCISRQR WGVPIP
Sbjct: 418 IIRATAQWFADVDNIKELALKALEEVKFVPESGRSRLEAFVKGRSEWCISRQRAWGVPIP 477
Query: 1225 VFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
YD GD ++ E I+H ++I E G D WWS
Sbjct: 478 ALYDANGDAVM-TEKTIEHIISVIQERGTDAWWS 510
>gi|212526158|ref|XP_002143236.1| isoleucyl-tRNA synthetase, putative [Talaromyces marneffei ATCC
18224]
gi|210072634|gb|EEA26721.1| isoleucyl-tRNA synthetase, putative [Talaromyces marneffei ATCC
18224]
Length = 1001
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 236/646 (36%), Positives = 345/646 (53%), Gaps = 54/646 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEY +HIS + +++ L +VP + L L A+IWTTTPW+LPAN
Sbjct: 196 GTALAEAELEYNENHISTTAFVRFPLVKVPEQIRSNPLVDTDSLSAVIWTTTPWTLPANA 255
Query: 473 FIAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDV-VCDFPGQYLQDITYIH 528
IA + +L Y + VK +N +++A+ + + + D+ V V G L T
Sbjct: 256 AIAISESLNYLI--VKSSNHGQLLIAESRLTYFQDMLKEDLQVLVPSIQGSELCQETTYR 313
Query: 529 PINKEQ--RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
P+ + ++ A FV++ G+GLVHCAP HG DD+ + LA+ I + ++G+++
Sbjct: 314 PLFPRDGIEEQPIVAADFVTADSGSGLVHCAPGHGMDDYEVCLAQGIRAFAPVNDEGRFT 373
Query: 587 PDAGPG----LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQ 640
+A P L G ++L +G VL VE +L Y+H YPYDWR+KKP+I++A++
Sbjct: 374 DEAMPHKPSFLSGKSVLDEGNTLVLQYVESTNQLLNQHKYEHKYPYDWRSKKPIIIRATE 433
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 700
QWF D I+ ALA LE+V FVP + K+ L++ + R WCISRQR WGVPIP YD
Sbjct: 434 QWFADVANIRESALASLEDVTFVPATGKQRLKNFVQNRTEWCISRQRAWGVPIPALYDKT 493
Query: 701 T--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL----NTSDVNS-NVTKSNDILDIWF 753
T ++ + + H +IDE G D WW+ S E + NS + D +D+WF
Sbjct: 494 TGQAVLTKETVSHIMNVIDERGIDAWWTDSPEDPAWIPHHLQQENSPGYRRGTDTMDVWF 553
Query: 754 DSGISWSHVL-----KDKPAHVYMEGMDQINGWFMSSLLTSVALKHT----------APF 798
DSG SW+ V K++PA +Y+EG DQ GWF SSLLT V+ + APF
Sbjct: 554 DSGTSWTQVEDKSLGKERPADIYLEGTDQHRGWFQSSLLTYVSHQVASGTVESSTIKAPF 613
Query: 799 RNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL 858
+++ HGF +D+ KMSKS+GNVI I G P +K SA +
Sbjct: 614 KHLITHGFTLDQDARKMSKSIGNVIQPDAIMNGTLLPPLKQKKSK---SAKEQKASGPVY 670
Query: 859 PAYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
A G D LR WV AS D T V IG+ +L + + K R + + LLG L +
Sbjct: 671 DALGPDALRLWV---ASSDYTRDVVIGQQVLQTVNTSLHKFRVTFKLLLGALGDFDPKV- 726
Query: 917 SISRYVDVYMLKR-----LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
++ +Y D++ + R L +T + F++ +A L + E SAFY +KD
Sbjct: 727 NMRQYEDLHKIDRQALMQLTRLVDTCRNAFDNFEFYKAVNALNRWANLEFSAFYMETLKD 786
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
RLY ++ N +R + TL I+ L +API P L EE + H P
Sbjct: 787 RLYTEAENSASRRAAQTTLFYIYTYLQEVLAPITPLLVEESWEHTP 832
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 255/418 (61%), Gaps = 27/418 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQRE F+LHDGPPYANG H+GHA+NKILKDI R+ L +GKR+HY PGW
Sbjct: 35 ELYAWQRENRPASDTFVLHDGPPYANGELHVGHALNKILKDIINRTQLSRGKRIHYAPGW 94
Query: 66 DCHGLPIELKAITSKDK--------LLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ ++ K L S IRK A+ A +T+ Q F+ WGV+ADW
Sbjct: 95 DCHGLPIELKALQAQQKDGNDFSKGLGSAATIRKAARKLAEKTVKEQMRGFQGWGVMADW 154
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E + Y T DK++ +QL F + ++ IYR KPVYWSPS+ TALAE+ELEY +H+S
Sbjct: 155 EGH-YKTLDKKFEMSQLGIFREMVEKGLIYRRFKPVYWSPSTGTALAEAELEYNENHIST 213
Query: 178 SIYLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA 233
+ +++ L +VP + L L A+IWTTTPW+LPAN IA + +L Y + VK +
Sbjct: 214 TAFVRFPLVKVPEQIRSNPLVDTDSLSAVIWTTTPWTLPANAAIAISESLNYLI--VKSS 271
Query: 234 N---VIVAKCLVESLKWTFQTDIEV-VCDFPGQYLQDITYIHPINKEQ--RDLKLLPAGF 287
N +++A+ + + + D++V V G L T P+ + ++ A F
Sbjct: 272 NHGQLLIAESRLTYFQDMLKEDLQVLVPSIQGSELCQETTYRPLFPRDGIEEQPIVAADF 331
Query: 288 VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILG 343
V++ G+GLVHCAP HG DD+ + LA+ I + ++G+++ +A P L G ++L
Sbjct: 332 VTADSGSGLVHCAPGHGMDDYEVCLAQGIRAFAPVNDEGRFTDEAMPHKPSFLSGKSVLD 391
Query: 344 DGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+G VL VE +L Y+H YPYDWR+KKP+I++A++QWF D I+ AL
Sbjct: 392 EGNTLVLQYVESTNQLLNQHKYEHKYPYDWRSKKPIIIRATEQWFADVANIRESALAS 449
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 96/156 (61%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKK 1162
+ ++G+++ +A P L G ++L EG VL VE +L Y+H YPYDWR+KK
Sbjct: 366 VNDEGRFTDEAMPHKPSFLSGKSVLDEGNTLVLQYVESTNQLLNQHKYEHKYPYDWRSKK 425
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ ALA LE V FVP + K+ L++ + R WCISRQR WGVP
Sbjct: 426 PIIIRATEQWFADVANIRESALASLEDVTFVPATGKQRLKNFVQNRTEWCISRQRAWGVP 485
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP YD T ++ + + H +IDE G D WW+
Sbjct: 486 IPALYDKTTGQAVLTKETVSHIMNVIDERGIDAWWT 521
>gi|58262480|ref|XP_568650.1| isoleucyl-tRNA synthetase, mitochondrial [Cryptococcus neoformans
var. neoformans JEC21]
gi|134118956|ref|XP_771981.1| hypothetical protein CNBN1610 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254585|gb|EAL17334.1| hypothetical protein CNBN1610 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230824|gb|AAW47133.1| isoleucyl-tRNA synthetase, mitochondrial, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1032
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 250/715 (34%), Positives = 376/715 (52%), Gaps = 53/715 (7%)
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDR 415
D+ TE DW ++K + I R+ +A+V K G + R+ +
Sbjct: 181 DIQKTEMRALGVMADWDSEKRTYRTLDHDFEIRQLRLF-QAMVQK--GFVTHRLRPVYYS 237
Query: 416 PG--TALAESELEYKPDHISKSIY--LKIKLNQVPAHLLE--------GATDLHALIWTT 463
P TALAE+ELEYK H S+S+Y L ++ + + L E G DL +IWTT
Sbjct: 238 PSSRTALAEAELEYKDGHRSRSVYVSLPVQEDDMSDALKEVYDSVKKQGGQDLSLVIWTT 297
Query: 464 TPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDF-PGQYLQ 522
TPWSLP N +A + +EY V S + + V + + +V + G L
Sbjct: 298 TPWSLPGNSGVAVHNDMEYVVTSNEQGRLFVLAGERKEAMEKIMGPLKIVGELKAGSQLV 357
Query: 523 DITYIHPINKEQRDLK---LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNL- 578
Y H + L + AG V+S GTGLVH APAHG +D++ A +E +L
Sbjct: 358 GTQYSHIFHPPSSPLPKPIVFAAGHVTSQTGTGLVHSAPAHGYEDYV-AFSEAGIILEKL 416
Query: 579 ---ITNQGKYSPD----AGPGLE------GLNILGDGKDQVLHLVEPD--VLWTENYQHS 623
I + GK++ + AG G E G +LG+G D ++ L+ +L E +H
Sbjct: 417 RCPIDDDGKFTEELVSWAGAGDESVSSLVGKEVLGEGTDAMVDLLRERGVLLAEETVEHR 476
Query: 624 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCI 683
YPYDW++KKP+I++A+ QWF D E IK +ALA LEEV+F P A+K L + R WCI
Sbjct: 477 YPYDWKSKKPIIVRATPQWFADVEHIKEDALAALEEVHFHPAQARKRLEAFVLSRSEWCI 536
Query: 684 SRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN 741
SRQR WGVPIP +D G ++ +A ++H +++D G D+WW+ VE+ + S
Sbjct: 537 SRQRSWGVPIPALFDSAGQPLMTPDA-LEHVISVLDAKGIDYWWTGPVEEFVPPSHKGQQ 595
Query: 742 VTKSNDILDIWFDSGISWSHVLKD--KP-----AHVYMEGMDQINGWFMSSLLTSV--AL 792
+TK D LD+WFDSG SW+ + + +P A VY+EG DQ GWF SSLLT +
Sbjct: 596 ITKGFDTLDVWFDSGSSWTMLREANLRPRSFPLADVYLEGSDQHRGWFQSSLLTKIIGTN 655
Query: 793 KHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDIT 852
AP+ V HGFV+DE+G KMSKS GN +S +I G K Y ++ G +SA+
Sbjct: 656 DRQAPYGTVITHGFVMDEEGEKMSKSAGNGLSPMEIIHGLKVSKIYVRAAGVSVSAYAAY 715
Query: 853 QGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS 912
++ PAYG DVLR W AA IG + ++ + ++++R++ R+LL
Sbjct: 716 SSSQDSPAYGADVLRLW-AASVDYTSDASIGPSSISHVNELLRRLRNTTRFLLANTCGED 774
Query: 913 ES--TGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVK 970
+ S R +D Y+L L + ++ Y + +++A + F + LS YF ++K
Sbjct: 775 KIFLEPSSLRIIDRYVLHELASLEVSVQEAYDRYNFSKAIHSISTFATSTLSTLYFDIIK 834
Query: 971 DRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL--PSRQGTF 1023
D LYCD + R + + L ++ L++ +API+PHL EE+Y ++ P + F
Sbjct: 835 DTLYCDPSDSTTRSNVVGVLQHVLLRLVQMMAPIVPHLGEELYENMDGPKKSSVF 889
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/429 (41%), Positives = 250/429 (58%), Gaps = 37/429 (8%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY Q + N P F+LHDGPPYANG H+GHA+NK++KDI R N+++G+RVHY+PGW
Sbjct: 83 ELYRQQYDE-NPDPLFVLHDGPPYANGHLHMGHALNKVIKDIINRYNVIRGRRVHYIPGW 141
Query: 66 DCHGLPIELKAITSKDKL---LSPLDIRKKAKNFALETINTQKAEFESWGVLADW--EHN 120
DCHGLPIE KA+ + KL L+P +R +A+ AL+ I+ QK E + GV+ADW E
Sbjct: 142 DCHGLPIEQKALAAIGKLHTSLTPDQVRAQARQVALDAIDIQKTEMRALGVMADWDSEKR 201
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T D ++ QL F + ++ ++ L+PVY+SPSSRTALAE+ELEYK H S+S+Y
Sbjct: 202 TYRTLDHDFEIRQLRLFQAMVQKGFVTHRLRPVYYSPSSRTALAEAELEYKDGHRSRSVY 261
Query: 181 --LKIKLNQVPAHLLE--------GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV 230
L ++ + + L E G DL +IWTTTPWSLP N +A + +EY V S
Sbjct: 262 VSLPVQEDDMSDALKEVYDSVKKQGGQDLSLVIWTTTPWSLPGNSGVAVHNDMEYVVTSN 321
Query: 231 KGANVIVAKCLVESLKWTFQTDIEVVCDF-PGQYLQDITYIHPINKEQRDLK---LLPAG 286
+ + V + +++V + G L Y H + L + AG
Sbjct: 322 EQGRLFVLAGERKEAMEKIMGPLKIVGELKAGSQLVGTQYSHIFHPPSSPLPKPIVFAAG 381
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNL----ITNQGKYSPD----AGPGLE- 337
V+S GTGLVH APAHG +D+ +A +E +L I + GK++ + AG G E
Sbjct: 382 HVTSQTGTGLVHSAPAHGYEDY-VAFSEAGIILEKLRCPIDDDGKFTEELVSWAGAGDES 440
Query: 338 -----GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 390
G +LG+G D ++ L+ +L E +H YPYDW++KKP+I++A+ QWF D E
Sbjct: 441 VSSLVGKEVLGEGTDAMVDLLRERGVLLAEETVEHRYPYDWKSKKPIIVRATPQWFADVE 500
Query: 391 RIKPEALVC 399
IK +AL
Sbjct: 501 HIKEDALAA 509
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 15/180 (8%)
Query: 1109 ITNQGKYSPD----AGPGLE------GLNILGEGKDQVLHLVEPD--VLWTENYQHSYPY 1156
I + GK++ + AG G E G +LGEG D ++ L+ +L E +H YPY
Sbjct: 420 IDDDGKFTEELVSWAGAGDESVSSLVGKEVLGEGTDAMVDLLRERGVLLAEETVEHRYPY 479
Query: 1157 DWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQ 1216
DW++KKP+I++A+ QWF D E IK +ALA LE V+F P A+K L + R WCISRQ
Sbjct: 480 DWKSKKPIIVRATPQWFADVEHIKEDALAALEEVHFHPAQARKRLEAFVLSRSEWCISRQ 539
Query: 1217 RVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
R WGVPIP +D G ++ +A ++H +++D G D+WW+ PVE+ + S +TK
Sbjct: 540 RSWGVPIPALFDSAGQPLMTPDA-LEHVISVLDAKGIDYWWTGPVEEFVPPSHKGQQITK 598
>gi|157412597|ref|YP_001483463.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
gi|166980057|sp|A8G2P6.1|SYI_PROM2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|157387172|gb|ABV49877.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 965
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/630 (36%), Positives = 350/630 (55%), Gaps = 54/630 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH-LLEGATD------------LHALIWTTT 464
TALAE+ELEY DH SKSIY+ +K+ +VP LL+G + IWTTT
Sbjct: 204 TALAEAELEYPDDHYSKSIYVSLKITKVPDKVLLKGCQENPNIKKESFLGNSFITIWTTT 263
Query: 465 PWSLPANQFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
PW++PAN+ +A NP + Y + + + AK L + F ++ + G L++
Sbjct: 264 PWTIPANEAVAVNPKISYVFVIDEDKRIFLFAKNLFSEISEKFNKIFKILFEVKGSSLEN 323
Query: 524 ITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
I Y HP + ++ +++ G ++++ GTG+VH AP HG DDF + +P+ ++ +
Sbjct: 324 IEYQHPT--KNKNCRIVIGGDYITTESGTGIVHTAPGHGIDDFNVGQKYDLPITCVVDEK 381
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQ 640
G + +G +G N+L D D ++ ++ +L ENY+H YPYDWRTKKP I +A++
Sbjct: 382 GNLNEYSGQ-FKGSNVLKDSNDLIIEYLKGKNLLLLQENYKHRYPYDWRTKKPTIFRATE 440
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--D 698
QWF + + AL +E+V ++P + KK + + R WCISRQR WGVPIPVFY +
Sbjct: 441 QWFASVDGFRSSALKAIEDVEWMPATGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYKKN 500
Query: 699 GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSG 756
G+ I++N I H L E+G D WW V+ LL N + K D +D+WFDSG
Sbjct: 501 GNEILLNSEIINHIQELFSEYGADIWWDWEVKNLLPENYLKESDLWEKGTDTMDVWFDSG 560
Query: 757 ISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
SW+ V + + PA +Y+EG DQ GWF SSLLTSVA+ + P++ V HGF +DE
Sbjct: 561 SSWAAVCEQRSELKYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKRVLTHGFALDEN 620
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA 871
G KMSKS+GNV+ + I G GN K PAYG DVLR WV+
Sbjct: 621 GRKMSKSLGNVVDPNIIING-----------GN---------NKKSEPAYGADVLRLWVS 660
Query: 872 AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYML 927
+ VPIG NIL D +K+R++ RYLLG +H++ + S +D +ML
Sbjct: 661 S-VDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFEIDQLPLLDQWML 719
Query: 928 KRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGL 987
RL E + + Y ++++R ++L +F V +LS FY + KDRLY + + R S
Sbjct: 720 GRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDRLYVSAKSQFRRRSCQ 779
Query: 988 HTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ + L ++P++ H+AE+++ ++P
Sbjct: 780 FVMSKVVENLAVLISPVLCHMAEDIWQNIP 809
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 243/403 (60%), Gaps = 25/403 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N F LHDGPPYANG+ H+GHA+NK+LKDI + L+G +VHYVPGWDCHGLPIELK
Sbjct: 56 NSGKTFTLHDGPPYANGSLHMGHALNKVLKDIINKYKTLKGFKVHYVPGWDCHGLPIELK 115
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ + + K L+ L +RKKA ++A + IN Q F+ WG+ DW+ N Y T K Y
Sbjct: 116 VLQNLKSHERKNLNSLSLRKKATDYAHKQINNQMEGFKRWGIWGDWD-NPYLTLKKSYES 174
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F ++ YIYR LKPV+WSPSSRTALAE+ELEY DH SKSIY+ +K+ +VP
Sbjct: 175 AQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDDHYSKSIYVSLKITKVPDK 234
Query: 192 -LLEGATD------------LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IV 237
LL+G + IWTTTPW++PAN+ +A NP + Y + + +
Sbjct: 235 VLLKGCQENPNIKKESFLGNSFITIWTTTPWTIPANEAVAVNPKISYVFVIDEDKRIFLF 294
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGL 296
AK L + F +++ + G L++I Y HP + ++ +++ G ++++ GTG+
Sbjct: 295 AKNLFSEISEKFNKIFKILFEVKGSSLENIEYQHPT--KNKNCRIVIGGDYITTESGTGI 352
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP HG DDF + +P+ ++ +G + +G +G N+L D D ++ ++
Sbjct: 353 VHTAPGHGIDDFNVGQKYDLPITCVVDEKGNLNEYSGQ-FKGSNVLKDSNDLIIEYLKGK 411
Query: 357 --VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L ENY+H YPYDWRTKKP I +A++QWF + + AL
Sbjct: 412 NLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVDGFRSSAL 454
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Query: 1123 LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
+G N+L + D ++ ++ +L ENY+H YPYDWRTKKP I +A++QWF + +
Sbjct: 391 FKGSNVLKDSNDLIIEYLKGKNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVDGFR 450
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 1238
AL +E V ++P + KK + + R WCISRQR WGVPIPVFY +G+ I++N
Sbjct: 451 SSALKAIEDVEWMPATGKKRIYSMVVGRGDWCISRQRSWGVPIPVFYKKNGNEILLNSEI 510
Query: 1239 IKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L E+G D WW V+ LL
Sbjct: 511 INHIQELFSEYGADIWWDWEVKNLL 535
>gi|164428683|ref|XP_964746.2| hypothetical protein NCU00920 [Neurospora crassa OR74A]
gi|157072240|gb|EAA35510.2| hypothetical protein NCU00920 [Neurospora crassa OR74A]
Length = 962
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/642 (37%), Positives = 335/642 (52%), Gaps = 50/642 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGAT-DLHALIWTTTPWSLPANQF 473
GTALAE+ELEY HISKS Y++ + + A + LEG T +L+A+IWTTTPW+LPAN+
Sbjct: 189 GTALAEAELEYNEAHISKSAYVRFPITKDSARIPGLEGFTGNLYAVIWTTTPWTLPANRA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD---IDVVCDFPGQYLQDITYIHPI 530
IA + L Y V +VA+ +E + + +++ PG L + Y++P+
Sbjct: 249 IAVHDDLLYHAVRVGDDAYLVAEGGLERVAKVLMGEEGTPEILATVPGSQLTQLQYVNPL 308
Query: 531 -NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K + FV+ G+GLVHCAP HG DD+LL IPV + N G ++ +A
Sbjct: 309 QGKSAAPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLLCKDLGIPVSAPVDNDGIFTEEA 368
Query: 590 GPG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
P L+G+ +L G VL L + +VL Y+H YPYDWRTKKP+I++A+ QWF D
Sbjct: 369 YPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHKYKHKYPYDWRTKKPIIIRATAQWFAD 428
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTII 703
+ IK AL LEEV FVPES + L + R WCISRQR WGVPIP YD GD ++
Sbjct: 429 VDNIKELALKALEEVKFVPESGRSRLEAFVKGRSEWCISRQRAWGVPIPALYDANGDAVM 488
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNSNVTKSNDILDIWFDSGISWS 760
E I+H ++I E G D WWS + + T+ D +D+WFDSG SW+
Sbjct: 489 -TEKTIEHIISVIQERGTDAWWSDDPHDPVWIPASLRGKGPFTRGRDTMDVWFDSGSSWT 547
Query: 761 HVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT--------------APFRNVFLHGF 806
D+ A VY+EG DQ GWF SSLLT VA +PF+ + HGF
Sbjct: 548 QT--DRQADVYLEGSDQHRGWFQSSLLTRVAAMAVQSPTANGTTNAVGLSPFKTLITHGF 605
Query: 807 VVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVL 866
+D+ G KMSKS+GN+ISA + G+ P V + A G D L
Sbjct: 606 TLDKAGKKMSKSLGNIISADQVMDGSLLPPL------KVRNKDRDPNAPPPKDALGPDAL 659
Query: 867 RWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYM 926
R WVA+ V +G+ +L + + K R+ ++ L G + + + + +D
Sbjct: 660 RLWVASSDYTSDIV-LGEPVLKTIHQSLTKYRTIIKMLTGSMEQSARAAPLTA--LDHIA 716
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L +L + ++ Y +++ +A L ++ N+LSAFY +KDRLYC G
Sbjct: 717 LVQLKDAMVEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKDRLYCADGGG------ 770
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
L IF LR +API P L EE + H P+ S H
Sbjct: 771 --VLEPIFMGFLRMLAPITPVLVEEAWEHRPAWMKEDPSILH 810
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/404 (44%), Positives = 251/404 (62%), Gaps = 13/404 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ F+LHDGPPYANG+ H GHA+NKILKDI +R+ + QG+RV Y+PGW
Sbjct: 35 DLYKWQAANRPADDTFLLHDGPPYANGSLHAGHALNKILKDIIIRTKVQQGQRVTYIPGW 94
Query: 66 DCHGLPIELKAITSKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIELKA+++++ + ++P IR+ A++ A +T+ Q F ++ V++DWE N + T
Sbjct: 95 DCHGLPIELKAVSTEEGRTMTPHAIRQAARSLAAKTVLEQMDSFRTYAVMSDWE-NRWTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D + NQL F + + IYR KPVYWSPSS TALAE+ELEY H+SKS Y++
Sbjct: 154 MDMAFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAEAELEYNEAHISKSAYVRFP 213
Query: 185 LNQVPAHL--LEGAT-DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + A + LEG T +L+A+IWTTTPW+LPAN+ IA + L Y V +VA+
Sbjct: 214 ITKDSARIPGLEGFTGNLYAVIWTTTPWTLPANRAIAVHDDLLYHAVRVGDDAYLVAEGG 273
Query: 242 VESLKWTFQTD---IEVVCDFPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLV 297
+E + + E++ PG L + Y++P+ K + FV+ G+GLV
Sbjct: 274 LERVAKVLMGEEGTPEILATVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLV 333
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVLHLV 353
HCAP HG DD+LL IPV + N G ++ +A P L+G+ +L G VL L
Sbjct: 334 HCAPGHGFDDYLLCKDLGIPVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELF 393
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +VL Y+H YPYDWRTKKP+I++A+ QWF D + IK AL
Sbjct: 394 KDNVLNVHKYKHKYPYDWRTKKPIIIRATAQWFADVDNIKELAL 437
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ N G ++ +A P L+G+ +L G VL L + +VL Y+H YPYDWRTKKP+
Sbjct: 358 VDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHKYKHKYPYDWRTKKPI 417
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D + IK AL LE V FVPES + L + R WCISRQR WGVPIP
Sbjct: 418 IIRATAQWFADVDNIKELALKALEEVKFVPESGRSRLEAFVKGRSEWCISRQRAWGVPIP 477
Query: 1225 VFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
YD GD ++ E I+H ++I E G D WWS
Sbjct: 478 ALYDANGDAVM-TEKTIEHIISVIQERGTDAWWS 510
>gi|38567295|emb|CAE76584.1| related to isoleucine--tRNA ligase [Neurospora crassa]
Length = 957
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/642 (37%), Positives = 335/642 (52%), Gaps = 50/642 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGAT-DLHALIWTTTPWSLPANQF 473
GTALAE+ELEY HISKS Y++ + + A + LEG T +L+A+IWTTTPW+LPAN+
Sbjct: 184 GTALAEAELEYNEAHISKSAYVRFPITKDSARIPGLEGFTGNLYAVIWTTTPWTLPANRA 243
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD---IDVVCDFPGQYLQDITYIHPI 530
IA + L Y V +VA+ +E + + +++ PG L + Y++P+
Sbjct: 244 IAVHDDLLYHAVRVGDDAYLVAEGGLERVAKVLMGEEGTPEILATVPGSQLTQLQYVNPL 303
Query: 531 -NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K + FV+ G+GLVHCAP HG DD+LL IPV + N G ++ +A
Sbjct: 304 QGKSAAPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLLCKDLGIPVSAPVDNDGIFTEEA 363
Query: 590 GPG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
P L+G+ +L G VL L + +VL Y+H YPYDWRTKKP+I++A+ QWF D
Sbjct: 364 YPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHKYKHKYPYDWRTKKPIIIRATAQWFAD 423
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTII 703
+ IK AL LEEV FVPES + L + R WCISRQR WGVPIP YD GD ++
Sbjct: 424 VDNIKELALKALEEVKFVPESGRSRLEAFVKGRSEWCISRQRAWGVPIPALYDANGDAVM 483
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNSNVTKSNDILDIWFDSGISWS 760
E I+H ++I E G D WWS + + T+ D +D+WFDSG SW+
Sbjct: 484 -TEKTIEHIISVIQERGTDAWWSDDPHDPVWIPASLRGKGPFTRGRDTMDVWFDSGSSWT 542
Query: 761 HVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT--------------APFRNVFLHGF 806
D+ A VY+EG DQ GWF SSLLT VA +PF+ + HGF
Sbjct: 543 QT--DRQADVYLEGSDQHRGWFQSSLLTRVAAMAVQSPTANGTTNAVGLSPFKTLITHGF 600
Query: 807 VVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVL 866
+D+ G KMSKS+GN+ISA + G+ P V + A G D L
Sbjct: 601 TLDKAGKKMSKSLGNIISADQVMDGSLLPPL------KVRNKDRDPNAPPPKDALGPDAL 654
Query: 867 RWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYM 926
R WVA+ V +G+ +L + + K R+ ++ L G + + + + +D
Sbjct: 655 RLWVASSDYTSDIV-LGEPVLKTIHQSLTKYRTIIKMLTGSMEQSARAAPLTA--LDHIA 711
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L +L + ++ Y +++ +A L ++ N+LSAFY +KDRLYC G
Sbjct: 712 LVQLKDAMVEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKDRLYCADGGG------ 765
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
L IF LR +API P L EE + H P+ S H
Sbjct: 766 --VLEPIFMGFLRMLAPITPVLVEEAWEHRPAWMKEDPSILH 805
Score = 316 bits (810), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 244/404 (60%), Gaps = 21/404 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ F+LHDGPPYANG+ H GHA+NKILKDI +R+ + QG W
Sbjct: 38 DLYKWQAANRPADDTFLLHDGPPYANGSLHAGHALNKILKDIIIRTKVQQG--------W 89
Query: 66 DCHGLPIELKAITSKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIELKA+++++ + ++P IR+ A++ A +T+ Q F ++ V++DWE N + T
Sbjct: 90 DCHGLPIELKAVSTEEGRTMTPHAIRQAARSLAAKTVLEQMDSFRTYAVMSDWE-NRWTT 148
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D + NQL F + + IYR KPVYWSPSS TALAE+ELEY H+SKS Y++
Sbjct: 149 MDMAFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAEAELEYNEAHISKSAYVRFP 208
Query: 185 LNQVPAHL--LEGAT-DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + A + LEG T +L+A+IWTTTPW+LPAN+ IA + L Y V +VA+
Sbjct: 209 ITKDSARIPGLEGFTGNLYAVIWTTTPWTLPANRAIAVHDDLLYHAVRVGDDAYLVAEGG 268
Query: 242 VESLKWTFQTD---IEVVCDFPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLV 297
+E + + E++ PG L + Y++P+ K + FV+ G+GLV
Sbjct: 269 LERVAKVLMGEEGTPEILATVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLV 328
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVLHLV 353
HCAP HG DD+LL IPV + N G ++ +A P L+G+ +L G VL L
Sbjct: 329 HCAPGHGFDDYLLCKDLGIPVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELF 388
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +VL Y+H YPYDWRTKKP+I++A+ QWF D + IK AL
Sbjct: 389 KDNVLNVHKYKHKYPYDWRTKKPIIIRATAQWFADVDNIKELAL 432
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ N G ++ +A P L+G+ +L G VL L + +VL Y+H YPYDWRTKKP+
Sbjct: 353 VDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHKYKHKYPYDWRTKKPI 412
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D + IK AL LE V FVPES + L + R WCISRQR WGVPIP
Sbjct: 413 IIRATAQWFADVDNIKELALKALEEVKFVPESGRSRLEAFVKGRSEWCISRQRAWGVPIP 472
Query: 1225 VFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
YD GD ++ E I+H ++I E G D WWS
Sbjct: 473 ALYDANGDAVM-TEKTIEHIISVIQERGTDAWWS 505
>gi|395836198|ref|XP_003791049.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Otolemur
garnettii]
Length = 801
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 272/406 (66%), Gaps = 13/406 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYHMMNGSKVH 148
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE+K ++ SK + LS +++R+KA++FA I QK+ F WG++ADW
Sbjct: 149 FVPGWDCHGLPIEIKVLSELGSKAQSLSAVELREKARSFAKAAIEKQKSAFMRWGIMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y + +YR KPV+WSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDAKYEAKQLRIFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
S+Y+K L + A LL+ ++ ++ L+WTT PW++PANQ + + P +Y+V + G
Sbjct: 268 SVYVKFPLLKPSPKLASLLDSSSPVNILVWTTQPWTIPANQAVCYMPQSKYAVVKCTSSG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A V S+ +T E V F G L+D T HP+ ++ LLPA V+ +K
Sbjct: 328 DLYILAADKVTSVASALETTFETVSTFSGVDLEDGTCSHPLIPDKVS-PLLPANHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A + L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQYNLSTDCLVDEDGIFTDVAGPELQNKAVLEEGTDVVIKM 446
Query: 353 VE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++ + L E HSYPYDWRTKKPVI++AS+QWF++ IK A
Sbjct: 447 LQTAKNFLKEEKVVHSYPYDWRTKKPVIIRASKQWFVNITDIKTTA 492
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 161/265 (60%), Gaps = 8/265 (3%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+S+Y+K L + A LL+ ++ ++ L+WTT PW++PANQ +
Sbjct: 251 TALAEAELEYNPEHVSRSVYVKFPLLKPSPKLASLLDSSSPVNILVWTTQPWTIPANQAV 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V + G I+A V ++ +T + V F G L+D T HP+
Sbjct: 311 CYMPQSKYAVVKCTSSGDLYILAADKVTSVASALETTFETVSTFSGVDLEDGTCSHPLIP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G ++ AGP
Sbjct: 371 DKVS-PLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQYNLSTDCLVDEDGIFTDVAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ + L E HSYPYDWRTKKPVI++AS+QWF++ IK
Sbjct: 430 LQNKAVLEEGTDVVIKMLQTAKNFLKEEKVVHSYPYDWRTKKPVIIRASKQWFVNITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQI 675
A L++V F+P S+ + + I
Sbjct: 490 TTAKELLKKVKFIPGSSLNAMVEMI 514
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 4/124 (3%)
Query: 898 RSSLRYLLGVLHNHSESTGSI---SRYV-DVYMLKRLCEFQNTMDTLYGEFQYARASRVL 953
R++LR+LLG + + + T SI + YV D YML L + N + Y + + + R+L
Sbjct: 516 RNTLRFLLGNVTDFNPETDSIPVKNMYVIDQYMLHLLQDLANKVTESYRRYDFGKVVRLL 575
Query: 954 LNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
F ELS FYF+++KDRLYC++ N R S L I V++R+ API+PHLAEEV+
Sbjct: 576 RAFYTRELSNFYFSIIKDRLYCENENDPKRRSCQTALVEILDVVVRSFAPILPHLAEEVF 635
Query: 1014 SHLP 1017
H+P
Sbjct: 636 QHMP 639
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ + L E HSYPYDWRTKKPVI
Sbjct: 415 LVDEDGIFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNFLKEEKVVHSYPYDWRTKKPVI 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQI 1205
++AS+QWF++ IK A L+ V F+P S+ ++ + I
Sbjct: 475 IRASKQWFVNITDIKTTAKELLKKVKFIPGSSLNAMVEMI 514
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC++ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 589 SIIKDRLYCENENDPKRRSCQTALVEILDVVVRSFAPILPHLAEEVFQHMP 639
>gi|320165702|gb|EFW42601.1| isoleucyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 1078
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/673 (36%), Positives = 350/673 (52%), Gaps = 92/673 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-NQVPAHLLE-------GATDLHAL---------I 460
TALAE+ELEY+ +H+S + +++ +L A LL+ GA D AL +
Sbjct: 261 TALAEAELEYQDNHVSVAAHVRFELPANHKAALLQAANWQDAGAVDRAALSDNLAVSMVV 320
Query: 461 WTTTPWSLPANQFIAFNPALEYSVASVKGAN-----------------------VIVAKC 497
WTTTPW++P+NQ IA N +L+YS+ V A ++VA
Sbjct: 321 WTTTPWTIPSNQAIAINTSLDYSLLHVTEAVQPASPGRKWLTQTIMPSRSRDQVILVATP 380
Query: 498 LVENLKWTF---QTDIDVVCDFPGQYLQ--DITYIHPINKEQRDLKLLPAGFVSSSKGTG 552
LV ++ F Q+ + V G L + HP+ + R + ++ V++ GTG
Sbjct: 381 LVPSIVQDFATAQSQVKQVASISGASLLALGLQATHPL-EAHRTVPIIHGSHVTADAGTG 439
Query: 553 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 612
LVH APAHG DDF++ IP+LNL+ +G Y D GL GL +L G +VL L+E
Sbjct: 440 LVHTAPAHGVDDFIVCKTNNIPLLNLVDERGCYKADVAHGLAGLQVLTVGNAKVLELLEQ 499
Query: 613 --DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKT 670
+L + +H YPYDWR+KKPVI A++QWF +K +AL + V VP ++
Sbjct: 500 ADRLLLAKPLKHRYPYDWRSKKPVITLATKQWFASLTNVKHDALQAILGVELVPAVSRNR 559
Query: 671 LRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLS 728
L + R WCISRQR WGVPIPVFY+ +T ++++ H L+ + G D W++ S
Sbjct: 560 LAAMLGGRNDWCISRQRSWGVPIPVFYNKETGEPLLDDDMFAHIHQLVLQQGTDCWFTKS 619
Query: 729 VEQLLNTSDVN--SNVTKSNDILDIWFDSGISWSHV-------------LKDKP------ 767
V +LL S + + K D +D+WFDSG SW V DKP
Sbjct: 620 VAELLPASKASMAEQLVKGTDTMDVWFDSGTSWMLVQQLAAQQQQQQQKQADKPAPAPVV 679
Query: 768 AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHD 827
A + +EG DQ GWF SSLLTSV + APF+ + HGF++DE+G KMSKS+GNV+
Sbjct: 680 ADLVLEGSDQHRGWFQSSLLTSVIARGVAPFKTIVTHGFLLDERGRKMSKSLGNVVEPAR 739
Query: 828 ITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNIL 887
IT G S G +G + A G DVLR W AA A V I K+ +
Sbjct: 740 ITHGG--------SAG--------AKGGEPWTAAGTDVLRAW-AASADYSADVVISKDAI 782
Query: 888 NSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGE 943
+ V+KIR++ RYLLG LH+ + + R VD +L+R +++ Y
Sbjct: 783 KAQTQIVKKIRNTFRYLLGNLHDFDPAKHLVPLASLRLVDRVVLQRTSALWDSVQQGYES 842
Query: 944 FQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAP 1003
+ +ARAS + F ELS FYF L KDRLY R + L++ + + VAP
Sbjct: 843 YAFARASLAITTFCNVELSGFYFELSKDRLYAAGAESPERRAAQTVLYHAVVTICKAVAP 902
Query: 1004 IMPHLAEEVYSHL 1016
++ HLA+EV+SHL
Sbjct: 903 VLCHLADEVWSHL 915
Score = 331 bits (849), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/429 (43%), Positives = 251/429 (58%), Gaps = 52/429 (12%)
Query: 19 PEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI- 77
P FILHDGPPYANG H+GHA+NKILKDI +R +L+G RVH+VPGWDCHGLPIELKA+
Sbjct: 117 PLFILHDGPPYANGQLHLGHAMNKILKDIVVRHKVLRGNRVHFVPGWDCHGLPIELKALG 176
Query: 78 --TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
+K +P +R KA FA E + Q+ EF SWGVL DW+H Y T Y QL
Sbjct: 177 DSLTKHVEFTPAQLRTKAAQFAREAMEMQRKEFMSWGVLGDWQHP-YLTMTPSYEARQLQ 235
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL-NQVPAHLLE 194
FY LY + IYR LKPV+WSPS++TALAE+ELEY+ +HVS + +++ +L A LL+
Sbjct: 236 VFYQLYTKKLIYRGLKPVHWSPSTQTALAEAELEYQDNHVSVAAHVRFELPANHKAALLQ 295
Query: 195 -------GATDLHAL---------IWTTTPWSLPANQFIAFNPALEYSVASVKGA----- 233
GA D AL +WTTTPW++P+NQ IA N +L+YS+ V A
Sbjct: 296 AANWQDAGAVDRAALSDNLAVSMVVWTTTPWTIPSNQAIAINTSLDYSLLHVTEAVQPAS 355
Query: 234 ------------------NVIVAKCLVESLKWTF---QTDIEVVCDFPGQYL--QDITYI 270
++VA LV S+ F Q+ ++ V G L +
Sbjct: 356 PGRKWLTQTIMPSRSRDQVILVATPLVPSIVQDFATAQSQVKQVASISGASLLALGLQAT 415
Query: 271 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 330
HP+ + R + ++ V++ GTGLVH APAHG DDF++ IP+LNL+ +G Y
Sbjct: 416 HPL-EAHRTVPIIHGSHVTADAGTGLVHTAPAHGVDDFIVCKTNNIPLLNLVDERGCYKA 474
Query: 331 DAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFID 388
D GL GL +L G +VL L+E +L + +H YPYDWR+KKPVI A++QWF
Sbjct: 475 DVAHGLAGLQVLTVGNAKVLELLEQADRLLLAKPLKHRYPYDWRSKKPVITLATKQWFAS 534
Query: 389 TERIKPEAL 397
+K +AL
Sbjct: 535 LTNVKHDAL 543
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
LNL+ +G Y D GL GL +L G +VL L+E +L + +H YPYDWR+KKP
Sbjct: 463 LNLVDERGCYKADVAHGLAGLQVLTVGNAKVLELLEQADRLLLAKPLKHRYPYDWRSKKP 522
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI A++QWF +K +AL + GV VP ++ L + R WCISRQR WGVPI
Sbjct: 523 VITLATKQWFASLTNVKHDALQAILGVELVPAVSRNRLAAMLGGRNDWCISRQRSWGVPI 582
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVN 1269
PVFY+ +T ++++ H L+ + G D W++ V +LL S +
Sbjct: 583 PVFYNKETGEPLLDDDMFAHIHQLVLQQGTDCWFTKSVAELLPASKAS 630
>gi|259485657|tpe|CBF82864.1| TPA: hypothetical protein similar to isoleucine/valine tRNA
synthetase (Broad) [Aspergillus nidulans FGSC A4]
Length = 1000
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/643 (36%), Positives = 337/643 (52%), Gaps = 53/643 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + ++K L VP+HL L D+ A+IWTTTPW+LPAN
Sbjct: 201 GTALAEAELEYKDDHVSTAAFVKFPLVTVPSHLKRDPLLQGKDISAVIWTTTPWTLPANA 260
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA +P +Y+ V S ++VA+ +E L++ + D+ V+ G L D T P+
Sbjct: 261 AIAIHPLFQYTIVESAAHGYLLVAQSRLEYLEFVLKEDLSVIVPSILGSELVDNTTYQPL 320
Query: 531 NKEQRD--LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS-- 586
K L+ A FV++ GTGLVHCAP HG +D+ L+ I + + GK++
Sbjct: 321 FKAANSEPQPLIAADFVTADSGTGLVHCAPGHGMEDYEACLSRGILAFAPVDDHGKFTDL 380
Query: 587 --PDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
PD L G ++L DG VL +E +L+ Y H YPYDWR+K+P+I++A++QW
Sbjct: 381 AMPDDPKRLSGKSVLADGNVAVLEYIESQGQLLFQHRYGHRYPYDWRSKQPIIIRATEQW 440
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F D I+ AL L++V FVP + ++ L + + R WCISRQR WGVPIP Y T
Sbjct: 441 FADVADIQSSALKALDDVQFVPAAGRQRLENFVKNRSEWCISRQRAWGVPIPALYHQGTG 500
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-------LLNTSDVNSNVTKSNDILDIWF 753
++ + ++ H ++IDE G + WW+ L TS +S + D +D+WF
Sbjct: 501 EAVLTKDSVSHIMSVIDERGINAWWTDDANDPSWIPPALRETS--SSGYRRGTDTMDVWF 558
Query: 754 DSGISWSHVLK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHT--------APFRN 800
DSG SW+ V +PA VY+EG DQ GWF S LLT VA + APF+
Sbjct: 559 DSGTSWAEVETPYGEHGRPADVYLEGSDQHRGWFQSGLLTYVAHQLASGQTDAPRAPFKT 618
Query: 801 VFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPA 860
+ HGF +DE+G KMSKS+GNV+ DI G P + QG P
Sbjct: 619 LITHGFTLDEEGRKMSKSIGNVMEPQDIMAGTLLPP--------LKQKKGKKQGGDGKPV 670
Query: 861 Y---GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN-HSESTG 916
Y G D LR W AA + V +GK +L + + K R + + LLG L + E+
Sbjct: 671 YDALGPDALRLW-AASSDYTRDVVMGKQVLQTVHTSLHKYRVTFKLLLGALSDFRPENKV 729
Query: 917 SISR--YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
+ VD L L E T +F++ +A + + E SAFY +KDRLY
Sbjct: 730 QYDQLLLVDRIALLHLSEMTLAARTACEKFEFYKAVSAVNRWANLEFSAFYMEAIKDRLY 789
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ N +R + TL +I+ L + PI P L EE + H P
Sbjct: 790 TYAENSPSRRAAQTTLFHIYQHLQEVLGPITPLLVEETWEHTP 832
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 250/412 (60%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQR F+LHDGPPYANG H+GHA+NKILKDI R L GKRV YVPGW
Sbjct: 42 DLYAWQRRERPADRLFVLHDGPPYANGDLHVGHALNKILKDIICRVQLGAGKRVRYVPGW 101
Query: 66 DCHGLPIELKAITSKDK------LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ ++ ++ RK A+N A +T+ Q F S+ V+ADWE
Sbjct: 102 DCHGLPIELKALEARKDAREEGGIVDAAVTRKVARNLAEKTVKKQMNGFRSFVVMADWE- 160
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N + T DK++ K QL F + ++ IYR KPVYWSPS+ TALAE+ELEYK DHVS +
Sbjct: 161 NHWKTMDKDFEKRQLGIFREMVEKGLIYRRFKPVYWSPSTGTALAEAELEYKDDHVSTAA 220
Query: 180 YLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGAN 234
++K L VP+HL L D+ A+IWTTTPW+LPAN IA +P +Y+ V S
Sbjct: 221 FVKFPLVTVPSHLKRDPLLQGKDISAVIWTTTPWTLPANAAIAIHPLFQYTIVESAAHGY 280
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
++VA+ +E L++ + D+ V+ G L D T P+ K L+ A FV++
Sbjct: 281 LLVAQSRLEYLEFVLKEDLSVIVPSILGSELVDNTTYQPLFKAANSEPQPLIAADFVTAD 340
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS----PDAGPGLEGLNILGDGKD 347
GTGLVHCAP HG +D+ L+ I + + GK++ PD L G ++L DG
Sbjct: 341 SGTGLVHCAPGHGMEDYEACLSRGILAFAPVDDHGKFTDLAMPDDPKRLSGKSVLADGNV 400
Query: 348 QVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VL +E +L+ Y H YPYDWR+K+P+I++A++QWF D I+ AL
Sbjct: 401 AVLEYIESQGQLLFQHRYGHRYPYDWRSKQPIIIRATEQWFADVADIQSSAL 452
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 93/156 (59%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYS----PDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + GK++ PD L G ++L +G VL +E +L+ Y H YPYDWR+K+
Sbjct: 371 VDDHGKFTDLAMPDDPKRLSGKSVLADGNVAVLEYIESQGQLLFQHRYGHRYPYDWRSKQ 430
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ AL L+ V FVP + ++ L + + R WCISRQR WGVP
Sbjct: 431 PIIIRATEQWFADVADIQSSALKALDDVQFVPAAGRQRLENFVKNRSEWCISRQRAWGVP 490
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y T ++ + ++ H ++IDE G + WW+
Sbjct: 491 IPALYHQGTGEAVLTKDSVSHIMSVIDERGINAWWT 526
>gi|67525809|ref|XP_660966.1| hypothetical protein AN3362.2 [Aspergillus nidulans FGSC A4]
gi|40744150|gb|EAA63330.1| hypothetical protein AN3362.2 [Aspergillus nidulans FGSC A4]
Length = 1518
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/643 (36%), Positives = 337/643 (52%), Gaps = 53/643 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + ++K L VP+HL L D+ A+IWTTTPW+LPAN
Sbjct: 719 GTALAEAELEYKDDHVSTAAFVKFPLVTVPSHLKRDPLLQGKDISAVIWTTTPWTLPANA 778
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA +P +Y+ V S ++VA+ +E L++ + D+ V+ G L D T P+
Sbjct: 779 AIAIHPLFQYTIVESAAHGYLLVAQSRLEYLEFVLKEDLSVIVPSILGSELVDNTTYQPL 838
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS-- 586
K L+ A FV++ GTGLVHCAP HG +D+ L+ I + + GK++
Sbjct: 839 FKAANSEPQPLIAADFVTADSGTGLVHCAPGHGMEDYEACLSRGILAFAPVDDHGKFTDL 898
Query: 587 --PDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
PD L G ++L DG VL +E +L+ Y H YPYDWR+K+P+I++A++QW
Sbjct: 899 AMPDDPKRLSGKSVLADGNVAVLEYIESQGQLLFQHRYGHRYPYDWRSKQPIIIRATEQW 958
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT- 701
F D I+ AL L++V FVP + ++ L + + R WCISRQR WGVPIP Y T
Sbjct: 959 FADVADIQSSALKALDDVQFVPAAGRQRLENFVKNRSEWCISRQRAWGVPIPALYHQGTG 1018
Query: 702 -IIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-------LLNTSDVNSNVTKSNDILDIWF 753
++ + ++ H ++IDE G + WW+ L TS +S + D +D+WF
Sbjct: 1019 EAVLTKDSVSHIMSVIDERGINAWWTDDANDPSWIPPALRETS--SSGYRRGTDTMDVWF 1076
Query: 754 DSGISWSHVLK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHT--------APFRN 800
DSG SW+ V +PA VY+EG DQ GWF S LLT VA + APF+
Sbjct: 1077 DSGTSWAEVETPYGEHGRPADVYLEGSDQHRGWFQSGLLTYVAHQLASGQTDAPRAPFKT 1136
Query: 801 VFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPA 860
+ HGF +DE+G KMSKS+GNV+ DI G P + QG P
Sbjct: 1137 LITHGFTLDEEGRKMSKSIGNVMEPQDIMAGTLLPP--------LKQKKGKKQGGDGKPV 1188
Query: 861 Y---GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN-HSESTG 916
Y G D LR W AA + V +GK +L + + K R + + LLG L + E+
Sbjct: 1189 YDALGPDALRLW-AASSDYTRDVVMGKQVLQTVHTSLHKYRVTFKLLLGALSDFRPENKV 1247
Query: 917 SISR--YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
+ VD L L E T +F++ +A + + E SAFY +KDRLY
Sbjct: 1248 QYDQLLLVDRIALLHLSEMTLAARTACEKFEFYKAVSAVNRWANLEFSAFYMEAIKDRLY 1307
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ N +R + TL +I+ L + PI P L EE + H P
Sbjct: 1308 TYAENSPSRRAAQTTLFHIYQHLQEVLGPITPLLVEETWEHTP 1350
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 250/412 (60%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQR F+LHDGPPYANG H+GHA+NKILKDI R L GKRV YVPGW
Sbjct: 560 DLYAWQRRERPADRLFVLHDGPPYANGDLHVGHALNKILKDIICRVQLGAGKRVRYVPGW 619
Query: 66 DCHGLPIELKAITSKDK------LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ ++ ++ RK A+N A +T+ Q F S+ V+ADWE
Sbjct: 620 DCHGLPIELKALEARKDAREEGGIVDAAVTRKVARNLAEKTVKKQMNGFRSFVVMADWE- 678
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N + T DK++ K QL F + ++ IYR KPVYWSPS+ TALAE+ELEYK DHVS +
Sbjct: 679 NHWKTMDKDFEKRQLGIFREMVEKGLIYRRFKPVYWSPSTGTALAEAELEYKDDHVSTAA 738
Query: 180 YLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGAN 234
++K L VP+HL L D+ A+IWTTTPW+LPAN IA +P +Y+ V S
Sbjct: 739 FVKFPLVTVPSHLKRDPLLQGKDISAVIWTTTPWTLPANAAIAIHPLFQYTIVESAAHGY 798
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
++VA+ +E L++ + D+ V+ G L D T P+ K L+ A FV++
Sbjct: 799 LLVAQSRLEYLEFVLKEDLSVIVPSILGSELVDNTTYQPLFKAANSEPQPLIAADFVTAD 858
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS----PDAGPGLEGLNILGDGKD 347
GTGLVHCAP HG +D+ L+ I + + GK++ PD L G ++L DG
Sbjct: 859 SGTGLVHCAPGHGMEDYEACLSRGILAFAPVDDHGKFTDLAMPDDPKRLSGKSVLADGNV 918
Query: 348 QVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VL +E +L+ Y H YPYDWR+K+P+I++A++QWF D I+ AL
Sbjct: 919 AVLEYIESQGQLLFQHRYGHRYPYDWRSKQPIIIRATEQWFADVADIQSSAL 970
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 93/156 (59%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYS----PDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + GK++ PD L G ++L +G VL +E +L+ Y H YPYDWR+K+
Sbjct: 889 VDDHGKFTDLAMPDDPKRLSGKSVLADGNVAVLEYIESQGQLLFQHRYGHRYPYDWRSKQ 948
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ AL L+ V FVP + ++ L + + R WCISRQR WGVP
Sbjct: 949 PIIIRATEQWFADVADIQSSALKALDDVQFVPAAGRQRLENFVKNRSEWCISRQRAWGVP 1008
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y T ++ + ++ H ++IDE G + WW+
Sbjct: 1009 IPALYHQGTGEAVLTKDSVSHIMSVIDERGINAWWT 1044
>gi|71024823|ref|XP_762641.1| hypothetical protein UM06494.1 [Ustilago maydis 521]
gi|46100512|gb|EAK85745.1| hypothetical protein UM06494.1 [Ustilago maydis 521]
Length = 851
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/690 (34%), Positives = 360/690 (52%), Gaps = 100/690 (14%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP------AHLLEGATDLHALIWTTTPWSLPAN 471
TALAESELEY+ DH+S ++Y+ KL P AH A DLHA+IWTTTPWSLP+N
Sbjct: 49 TALAESELEYREDHLSNAVYVAFKLTAGPKLLHKLAHQSPLAEDLHAIIWTTTPWSLPSN 108
Query: 472 QFIAFNPALEYSVASV---KGANVIVAKCLVENLKWTFQT--------------DIDVVC 514
I NP LEYS+ +G+ +V VE L+ + ++ +
Sbjct: 109 MAINANPDLEYSIVRSLKKQGSYYLVGSDRVEALESLPSSLFAGPDDGEPKTLGPMEEIT 168
Query: 515 DFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLL----AL 569
G L D Y P++ + +L A +V++ GTGLVH APAHG +D+ +
Sbjct: 169 RIRGTDLCDSVYRSPLSAPDSSPRPILMADYVTALSGTGLVHSAPAHGAEDYQIWKQQGH 228
Query: 570 AEKIPVLNLITNQGKYSPDA-------------GPGLEGLNILGDGKDQVLHLVEPD--V 614
E+ + + I ++G+YS D G L G +LG+G +V+ +++ +
Sbjct: 229 IERHGIFSPINDEGRYSSDILQIDKVSSKTSTLGHRLIGKEVLGEGAQEVISILKERGAL 288
Query: 615 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQ 674
+ + +H YPYDWR+K+PVI++A+ QWF + + IK A+A L++V FVP ++ L
Sbjct: 289 VSVQTLRHKYPYDWRSKQPVIVRATAQWFANLDDIKQRAIAALKDVTFVPAGSRARLESF 348
Query: 675 IAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQL 732
+ R WCISRQRVWGVPIPV YD D ++ NI+H ++++ G D+WW E
Sbjct: 349 VLGRSEWCISRQRVWGVPIPVLYDMATDEPLMTVENIEHIASVLERKGTDYWWEADAEVF 408
Query: 733 LNT--SDVNSNVTKSNDILDIWFDSGISWSHVLKDKPAH---------------VYMEGM 775
+ +V K D +D+WFDSG SW+ L+D+ A VY+EG
Sbjct: 409 VAPPYREVGRKWRKGQDTVDVWFDSGTSWA-TLRDQIARDSNQTLPAKRGHIADVYLEGS 467
Query: 776 DQINGWFMSSLLTSVAL-----KHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQ 830
DQ GWF SSL+T++A K AP++ V HG+V+D + KMSKS+GNVIS I Q
Sbjct: 468 DQHRGWFQSSLITAIATTPEGQKPIAPYKTVVTHGYVLDNESRKMSKSLGNVISPLHIIQ 527
Query: 831 GAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPTVPIGKNILNS 889
G K GA + PAYG+DVLR WVA + + DP PIG I++
Sbjct: 528 GGK--------------------GADE-PAYGIDVLRLWVARSDYTADP--PIGSTIVHK 564
Query: 890 SQDDVQKIRSSLRYLLGVLHNHSES---TGSISRYVDVYMLKRLCEFQNTMDTLYGEFQY 946
+ + ++K+R++ R++L L N + S R +D ++L+ L + + Y + +
Sbjct: 565 TAETLRKLRNTARFMLANLPNTGDVPKLDRSKMRLLDRFVLQDLYQLERACAAAYESYDF 624
Query: 947 ARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMP 1006
A+ R L F + +S Y + KD LY D E R S + + I ++ +API P
Sbjct: 625 AQVVRRLTEFASSTMSNLYLDVGKDSLYLDGAENERRRSMVAIIDQILRTMMGIMAPITP 684
Query: 1007 HLAEEVYSHLPS-----RQGTFSSFCHFKV 1031
L+EE++ L +GT S+ F +
Sbjct: 685 FLSEEIFHFLNGATKDPAEGTLSAASVFTI 714
Score = 196 bits (497), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 177/330 (53%), Gaps = 44/330 (13%)
Query: 114 LADWEHNC-YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKP 172
+ADW + Y T D Y QL F + ++ IYR +PVYWSPS+ TALAESELEY+
Sbjct: 1 MADWSNAATYRTLDPGYEARQLRVFGEMVRKGLIYRQYRPVYWSPSNHTALAESELEYRE 60
Query: 173 DHVSKSIYLKIKLNQVP------AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYS 226
DH+S ++Y+ KL P AH A DLHA+IWTTTPWSLP+N I NP LEYS
Sbjct: 61 DHLSNAVYVAFKLTAGPKLLHKLAHQSPLAEDLHAIIWTTTPWSLPSNMAINANPDLEYS 120
Query: 227 VASV---KGANVIVAKCLVESLKWTFQT--------------DIEVVCDFPGQYLQDITY 269
+ +G+ +V VE+L+ + +E + G L D Y
Sbjct: 121 IVRSLKKQGSYYLVGSDRVEALESLPSSLFAGPDDGEPKTLGPMEEITRIRGTDLCDSVY 180
Query: 270 IHPINKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLL----ALAEKIPVLNLITN 324
P++ + +L A +V++ GTGLVH APAHG +D+ + E+ + + I +
Sbjct: 181 RSPLSAPDSSPRPILMADYVTALSGTGLVHSAPAHGAEDYQIWKQQGHIERHGIFSPIND 240
Query: 325 QGKYSPDA-------------GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPY 369
+G+YS D G L G +LG+G +V+ +++ ++ + +H YPY
Sbjct: 241 EGRYSSDILQIDKVSSKTSTLGHRLIGKEVLGEGAQEVISILKERGALVSVQTLRHKYPY 300
Query: 370 DWRTKKPVILKASQQWFIDTERIKPEALVC 399
DWR+K+PVI++A+ QWF + + IK A+
Sbjct: 301 DWRSKQPVIVRATAQWFANLDDIKQRAIAA 330
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 102/179 (56%), Gaps = 17/179 (9%)
Query: 1099 HFKVYHHLNLITNQGKYSPDA-------------GPGLEGLNILGEGKDQVLHLVEPD-- 1143
H + + + I ++G+YS D G L G +LGEG +V+ +++
Sbjct: 228 HIERHGIFSPINDEGRYSSDILQIDKVSSKTSTLGHRLIGKEVLGEGAQEVISILKERGA 287
Query: 1144 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRD 1203
++ + +H YPYDWR+K+PVI++A+ QWF + + IK A+A L+ V FVP ++ L
Sbjct: 288 LVSVQTLRHKYPYDWRSKQPVIVRATAQWFANLDDIKQRAIAALKDVTFVPAGSRARLES 347
Query: 1204 QIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
+ R WCISRQRVWGVPIPV YD D ++ NI+H ++++ G D+WW E
Sbjct: 348 FVLGRSEWCISRQRVWGVPIPVLYDMATDEPLMTVENIEHIASVLERKGTDYWWEADAE 406
>gi|350295981|gb|EGZ76958.1| isoleucyl-tRNA synthetase [Neurospora tetrasperma FGSC 2509]
Length = 962
Score = 385 bits (988), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/642 (37%), Positives = 336/642 (52%), Gaps = 50/642 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGAT-DLHALIWTTTPWSLPANQF 473
GTALAE+ELEY HISKS Y++ + + A + LEG T +L+A+IWTTTPW+LPAN+
Sbjct: 189 GTALAEAELEYNEAHISKSAYVRFPITKDSARIPGLEGFTGNLYAVIWTTTPWTLPANRA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD---IDVVCDFPGQYLQDITYIHPI 530
IA + L Y V +VA+ +E + + +++ PG L + Y++P+
Sbjct: 249 IAVHDDLLYHAVRVGDDAYLVAEGGLERVAKVLMGEEGTPEILATVPGSQLTQLQYVNPL 308
Query: 531 -NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K + FV+ G+GLVHCAP HG DD+LL I V + N G ++ +A
Sbjct: 309 QGKSAAPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLLCKDLGILVSAPVDNDGIFTEEA 368
Query: 590 GPG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
P L+G+ +L G VL L + +VL Y+H YPYDWRTKKP+I++A+ QWF D
Sbjct: 369 YPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHKYKHKYPYDWRTKKPIIIRATAQWFAD 428
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTII 703
+ IK AL LEEV FVPES + L + R WCISRQR WGVPIP YD GD ++
Sbjct: 429 VDNIKELALKALEEVKFVPESGRSRLEAFVKGRSEWCISRQRAWGVPIPALYDANGDAVM 488
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNSNVTKSNDILDIWFDSGISWS 760
E I+H ++I E G D WWS + + T+ D +D+WFDSG SW+
Sbjct: 489 -TEKTIEHIISVIQERGTDAWWSDDPHDPVWIPASLRGKGPFTRGRDTMDVWFDSGSSWT 547
Query: 761 HVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT--------------APFRNVFLHGF 806
D+ A VY+EG DQ GWF SSLLT VA +PF+ + HGF
Sbjct: 548 QT--DRQADVYLEGSDQHRGWFQSSLLTRVAAMAVQGPTADGTTNTVGLSPFKTLITHGF 605
Query: 807 VVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVL 866
+D+ G KMSKS+GN+ISA + G+ P K+ +A A G D L
Sbjct: 606 TLDKAGKKMSKSLGNIISADQVMDGSLLPPLKVKNKDRDPNAPPPKD------ALGPDAL 659
Query: 867 RWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYM 926
R WVA+ V +G+ +L + + K R+ ++ L G + + + + +D
Sbjct: 660 RLWVASSDYTSDIV-LGEPVLKTIHQSLTKYRTIIKMLTGSMEQSARAAPLTA--LDHIA 716
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L +L + ++ Y +++ +A L ++ N+LSAFY +KDRLYC G
Sbjct: 717 LVQLKDAMAEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKDRLYCADGGG------ 770
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
L IF LR +API P L EE + H P+ S H
Sbjct: 771 --VLEPIFMGFLRMLAPITPVLVEEAWEHRPAWMKEDPSILH 810
Score = 328 bits (841), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/404 (43%), Positives = 248/404 (61%), Gaps = 13/404 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+ Y WQ F+LHDGPPYANG+ H GHA+NKILKDI +R+ + QG+RV Y+PGW
Sbjct: 35 DFYKWQAANRPADDTFLLHDGPPYANGSLHAGHALNKILKDIIIRTKVQQGQRVTYIPGW 94
Query: 66 DCHGLPIELKAITSKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIELKA+++++ + ++P IR+ A++ A +T+ Q F ++ V++ WE N + T
Sbjct: 95 DCHGLPIELKAVSTEEGRTMTPHAIRQAARSLAAKTVLEQMDSFRTYAVMSGWE-NRWTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D + NQL F + + IYR KPVYWSPSS TALAE+ELEY H+SKS Y++
Sbjct: 154 MDMAFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAEAELEYNEAHISKSAYVRFP 213
Query: 185 LNQVPAHL--LEGAT-DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + A + LEG T +L+A+IWTTTPW+LPAN+ IA + L Y V +VA+
Sbjct: 214 ITKDSARIPGLEGFTGNLYAVIWTTTPWTLPANRAIAVHDDLLYHAVRVGDDAYLVAEGG 273
Query: 242 VESLKWTFQTD---IEVVCDFPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLV 297
+E + + E++ PG L + Y++P+ K + FV+ G+GLV
Sbjct: 274 LERVAKVLMGEEGTPEILATVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLV 333
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVLHLV 353
HCAP HG DD+LL I V + N G ++ +A P L+G+ +L G VL L
Sbjct: 334 HCAPGHGFDDYLLCKDLGILVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELF 393
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +VL Y+H YPYDWRTKKP+I++A+ QWF D + IK AL
Sbjct: 394 KDNVLNVHKYKHKYPYDWRTKKPIIIRATAQWFADVDNIKELAL 437
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ N G ++ +A P L+G+ +L G VL L + +VL Y+H YPYDWRTKKP+
Sbjct: 358 VDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHKYKHKYPYDWRTKKPI 417
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D + IK AL LE V FVPES + L + R WCISRQR WGVPIP
Sbjct: 418 IIRATAQWFADVDNIKELALKALEEVKFVPESGRSRLEAFVKGRSEWCISRQRAWGVPIP 477
Query: 1225 VFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
YD GD ++ E I+H ++I E G D WWS
Sbjct: 478 ALYDANGDAVM-TEKTIEHIISVIQERGTDAWWS 510
>gi|290991765|ref|XP_002678505.1| predicted protein [Naegleria gruberi]
gi|284092118|gb|EFC45761.1| predicted protein [Naegleria gruberi]
Length = 1020
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/638 (35%), Positives = 352/638 (55%), Gaps = 67/638 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
GTALAESELEY HISKS Y+ + + + +L A +WTTTPW+L AN+ I++
Sbjct: 250 GTALAESELEYPDVHISKSCYVLFPITTSNTEMSQKYGELFATVWTTTPWTLIANEAISY 309
Query: 477 NPALEYSVA--SVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYL---QDI------ 524
N +EYS+ S K +I+A L++++ + T + V+ G+ L DI
Sbjct: 310 NQDIEYSIIYDSEKHRRLIIASELMKSVCEKTGIKNFTVLQAMKGKDLFVNNDILMGDKV 369
Query: 525 -TYIHPINKEQRDLKL--LPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+Y++P+ D KL L V++ GTGLVH AP HG +DF + +P+ +
Sbjct: 370 SSYVNPLTSSVTDKKLPFLNGSHVTTEVGTGLVHTAPNHGIEDFQVVKDNSLPIGPCFVD 429
Query: 582 Q-GKYSPDAG-PGLEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVI 635
+ GKY+ P L GL +L G ++V+ +++ D+ L E+Y H YPYDWRTK+P++
Sbjct: 430 EYGKYNSQTPLPHLIGLPVLSVGNEKVVEMLQGDLSQYLLLKEDYSHRYPYDWRTKQPIL 489
Query: 636 LKASQQWFIDTERIKPEALACLEE-VNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIP 694
++ ++QWF + + +K A ++E + +P S + L+ + R WCISRQR WGVPIP
Sbjct: 490 IRMTEQWFAELKDLKNVAKEYVDEKIEMIPSSGRNRLKSFVESRDEWCISRQRTWGVPIP 549
Query: 695 VFYDGDT---IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDI 751
VFY + + +I+H +L+++HG D W+ +S +QLL+ N K D LD+
Sbjct: 550 VFYKENNPSEYLATSESIEHVISLVEKHGTDCWFEMSEDQLLSPQYRNQGWKKGTDTLDV 609
Query: 752 WFDSGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFV 807
WFDSG +W V+K PA VY+EG DQ GWF SSLLTS+A + P++ + HGFV
Sbjct: 610 WFDSGTTWFGVVKASGIPLPADVYLEGSDQHRGWFQSSLLTSLAYQGVPPYKKIVTHGFV 669
Query: 808 VDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLR 867
DE G KMSKS+GN I I + GVDVLR
Sbjct: 670 TDEAGKKMSKSIGNTIEPESI-----------------------------ISKQGVDVLR 700
Query: 868 WWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVD 923
WV+ H+ V IGKN++ +++KIR++ +++LGVL N+ + +S+ VD
Sbjct: 701 LWVS-HSDFSVDVSIGKNVIEKVSTNLKKIRNTAKFMLGVLENYDPNL-PVSKEQLVEVD 758
Query: 924 VYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEAR 983
Y++ R+ +F + + Y F Y + +++L+ F ELS+FY +VKDRLYC EAR
Sbjct: 759 YYIINRVKQFCDQITESYENFNYYKVNQLLMTFTY-ELSSFYLDIVKDRLYCGE--EEAR 815
Query: 984 LSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQG 1021
+H I + ++PI+ H AE++Y + ++
Sbjct: 816 KPSQKVIHYILDCYTKALSPIICHTAEDIYQSMEFKKN 853
Score = 285 bits (728), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/410 (40%), Positives = 240/410 (58%), Gaps = 33/410 (8%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
+G F LHDGPPYANGT H GH +NK+LKDIT R LL G V ++PGWDCHGLPIE K
Sbjct: 96 SGAKRFTLHDGPPYANGTLHTGHFLNKVLKDITNRFKLLTGHLVEFIPGWDCHGLPIESK 155
Query: 76 A---ITSKDKLLSPLDI--------RKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
I K K + I RK AK+FA + I +Q +F+ WGV+ +W+ N Y T
Sbjct: 156 VFQEIKKKKKGTEGITISGTKDPIIRKLAKDFAEQAIQSQLNDFKRWGVMGEWD-NPYKT 214
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+ + QL F ++ + YI+R KPVYWSPSS TALAESELEY H+SKS Y+
Sbjct: 215 MNPTFEAQQLRIFLDMLNKKYIFRGKKPVYWSPSSGTALAESELEYPDVHISKSCYVLFP 274
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA--SVKGANVIVAKCLV 242
+ + + +L A +WTTTPW+L AN+ I++N +EYS+ S K +I+A L+
Sbjct: 275 ITTSNTEMSQKYGELFATVWTTTPWTLIANEAISYNQDIEYSIIYDSEKHRRLIIASELM 334
Query: 243 ESL-KWTFQTDIEVVCDFPGQYL---QDI-------TYIHPINKEQRDLKL--LPAGFVS 289
+S+ + T + V+ G+ L DI +Y++P+ D KL L V+
Sbjct: 335 KSVCEKTGIKNFTVLQAMKGKDLFVNNDILMGDKVSSYVNPLTSSVTDKKLPFLNGSHVT 394
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ-GKYSPDAG-PGLEGLNILGDGKD 347
+ GTGLVH AP HG +DF + +P+ ++ GKY+ P L GL +L G +
Sbjct: 395 TEVGTGLVHTAPNHGIEDFQVVKDNSLPIGPCFVDEYGKYNSQTPLPHLIGLPVLSVGNE 454
Query: 348 QVLHLVEPD----VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 393
+V+ +++ D +L E+Y H YPYDWRTK+P++++ ++QWF + + +K
Sbjct: 455 KVVEMLQGDLSQYLLLKEDYSHRYPYDWRTKQPILIRMTEQWFAELKDLK 504
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 99/166 (59%), Gaps = 9/166 (5%)
Query: 1108 LITNQGKYSPDAG-PGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKK 1162
+ GKY+ P L GL +L G ++V+ +++ D+ L E+Y H YPYDWRTK+
Sbjct: 427 FVDEYGKYNSQTPLPHLIGLPVLSVGNEKVVEMLQGDLSQYLLLKEDYSHRYPYDWRTKQ 486
Query: 1163 PVILKASQQWFIDTERIKPEALACL-EGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGV 1221
P++++ ++QWF + + +K A + E + +P S + L+ + R WCISRQR WGV
Sbjct: 487 PILIRMTEQWFAELKDLKNVAKEYVDEKIEMIPSSGRNRLKSFVESRDEWCISRQRTWGV 546
Query: 1222 PIPVFYDGDT---IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
PIPVFY + + +I+H +L+++HG D W+ + +QLL+
Sbjct: 547 PIPVFYKENNPSEYLATSESIEHVISLVEKHGTDCWFEMSEDQLLS 592
>gi|121709383|ref|XP_001272405.1| isoleucyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
gi|119400554|gb|EAW10979.1| isoleucyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
Length = 1003
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 239/654 (36%), Positives = 337/654 (51%), Gaps = 55/654 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L +P L L DL A+IWTTTPW+LPAN
Sbjct: 201 GTALAEAELEYKDDHVSTAALVKFPLVSLPPTLAQDPLVQVKDLSAVIWTTTPWTLPANA 260
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA + +LEY+ V S ++VA+ +E L+ + D+ V+ G L D T P+
Sbjct: 261 VIAVHESLEYAIVQSDTHGQLLVAQSRLEYLENLLKEDLTVIIPSILGSQLADQTTYRPL 320
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K E ++ A FV++ G+GLVHCAP HG DD+ + IP + +QG+++
Sbjct: 321 FKSVEAEPQPIIAADFVTADSGSGLVHCAPGHGMDDYEACVPRGIPAFAPVDDQGRFTDK 380
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++LGDG VL ++ + +L Y+H YPYDWR+K P+I++A++QW
Sbjct: 381 AMPKDPARLSGKSVLGDGNAAVLEYIDSEGFLLAQHQYEHKYPYDWRSKLPIIIRATEQW 440
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DG 699
F D I+ A+ LE+V FVP S K+ L + + R WCISRQR WGVPIP Y G
Sbjct: 441 FADVADIRGRAVRALEDVKFVPASGKQRLENFVKNRSEWCISRQRAWGVPIPALYHRGTG 500
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLS------VEQLLNTSDVNSNVTKSNDILDIWF 753
D ++ + ++ H ++I++ G D WW+ + L + + D +D+WF
Sbjct: 501 DAVLTKD-SVSHIMSVIEQRGIDAWWTDDQSDPAWIPPALQ-GESGPGYRRGTDTMDVWF 558
Query: 754 DSGISWSHV----LKDKPAHVYMEGMDQINGWFMSSLLTSVA--------LKHTAPFRNV 801
DSG SW+ + PA VY+EG DQ GWF S LLT ++ APFR +
Sbjct: 559 DSGTSWAEIDIPPRDGHPADVYLEGTDQHRGWFQSGLLTYISHQLASGETTAPRAPFRTL 618
Query: 802 FLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY 861
HGF +DE+G KMSKS+GNVI I G LP + G Q + P Y
Sbjct: 619 ITHGFTLDEEGRKMSKSIGNVIHPQPIMDGT-LLPPLKPRKGK-----GKKQQENQGPVY 672
Query: 862 ---GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSEST--- 915
G D LR W AA + V +GK +L + + K R + + LLG L + S
Sbjct: 673 DALGPDALRMW-AAGSDYTRDVVMGKQVLQTVNTSLHKFRVTFKLLLGALSDFQPSDQLP 731
Query: 916 -GSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
G + + VD L L E +F++ +A + + E SAFY +KDRLY
Sbjct: 732 YGQLQQ-VDRMALMHLSEMVLACRKACNDFEFYKAVNAMNRWANLEFSAFYMEAIKDRLY 790
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
N +R TL +I+ L +API P L EE + H P T S C
Sbjct: 791 TYGENSISRRGAQTTLFHIYQYLQEVLAPITPLLIEETWEHAPE---TIRSHCE 841
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 187/412 (45%), Positives = 252/412 (61%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQR F+LHDGPPYANG H+GHA+NKILKDI R L QGKRV YVPGW
Sbjct: 42 ELYAWQRRERPADRPFVLHDGPPYANGELHVGHALNKILKDIICRVQLAQGKRVRYVPGW 101
Query: 66 DCHGLPIELKAITSKDKL------LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ + +L + IRK A+ A +T+ Q F S+GV+ADWE
Sbjct: 102 DCHGLPIELKALVQQKELGETGGSIGAAAIRKAARKLAGKTVKEQMKGFRSFGVMADWEG 161
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+ + T DKE+ K QL F + ++ IYR KPVYWSPS+ TALAE+ELEYK DHVS +
Sbjct: 162 H-WKTMDKEFEKRQLGVFREMVEKGLIYRRFKPVYWSPSTGTALAEAELEYKDDHVSTAA 220
Query: 180 YLKIKLNQVPAHL----LEGATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGAN 234
+K L +P L L DL A+IWTTTPW+LPAN IA + +LEY+ V S
Sbjct: 221 LVKFPLVSLPPTLAQDPLVQVKDLSAVIWTTTPWTLPANAVIAVHESLEYAIVQSDTHGQ 280
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
++VA+ +E L+ + D+ V+ G L D T P+ K E ++ A FV++
Sbjct: 281 LLVAQSRLEYLENLLKEDLTVIIPSILGSQLADQTTYRPLFKSVEAEPQPIIAADFVTAD 340
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKD 347
G+GLVHCAP HG DD+ + IP + +QG+++ A P L G ++LGDG
Sbjct: 341 SGSGLVHCAPGHGMDDYEACVPRGIPAFAPVDDQGRFTDKAMPKDPARLSGKSVLGDGNA 400
Query: 348 QVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VL ++ + +L Y+H YPYDWR+K P+I++A++QWF D I+ A+
Sbjct: 401 AVLEYIDSEGFLLAQHQYEHKYPYDWRSKLPIIIRATEQWFADVADIRGRAV 452
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ +QG+++ A P L G ++LG+G VL ++ + +L Y+H YPYDWR+K
Sbjct: 371 VDDQGRFTDKAMPKDPARLSGKSVLGDGNAAVLEYIDSEGFLLAQHQYEHKYPYDWRSKL 430
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ A+ LE V FVP S K+ L + + R WCISRQR WGVP
Sbjct: 431 PIIIRATEQWFADVADIRGRAVRALEDVKFVPASGKQRLENFVKNRSEWCISRQRAWGVP 490
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y GD ++ + ++ H ++I++ G D WW+
Sbjct: 491 IPALYHRGTGDAVLTKD-SVSHIMSVIEQRGIDAWWT 526
>gi|346323774|gb|EGX93372.1| isoleucyl-tRNA synthetase, putative [Cordyceps militaris CM01]
Length = 935
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/695 (35%), Positives = 348/695 (50%), Gaps = 57/695 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQ---VPAHLLEGATDLHALIWTTTPWSLPANQF 473
GTALAE+ELEYK DH+S S Y++ + + L L+A IWTTTPW+LPAN+
Sbjct: 175 GTALAEAELEYKDDHLSTSAYIRFPITSDYTTISELRNFDGPLYAAIWTTTPWTLPANKA 234
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPI-N 531
I + L Y+V V G ++VA +E ++ +VV D PG L + Y + +
Sbjct: 235 IGVHNDLLYAVLRVNGYGLLVASSRIEAVR-ELVPGAEVVADAIPGSKLAGLQYRNKLRG 293
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
K + A FVS+ GTGLVH AP HGQDD+ + L I I N G+++ +A P
Sbjct: 294 KSAPAHPIFHADFVSADSGTGLVHLAPGHGQDDYEICLEHGIEAFAPIDNDGRFTAEAYP 353
Query: 592 G-----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
+IL G VL LV DV+ T+ QH YPYDWR+KKPV+++A+ QWF D
Sbjct: 354 DDPEVLTSAPSILDGGSSSVLDLVAEDVIATQEIQHKYPYDWRSKKPVVIRATAQWFADV 413
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVN 705
IK +AL+ L+ V FVP+S + L I R WCISRQR WGVPIP YD + ++N
Sbjct: 414 GSIKDDALSALKNVKFVPDSGRARLESFIKGRSEWCISRQRSWGVPIPALYDRNGEAVMN 473
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
I H ++ E D W+S + + S + + D +D+WFDSG SW+ +
Sbjct: 474 AETIDHIINVMQERTSDAWFSDNPDDPAWIPSSLQGEFHRGTDTMDVWFDSGTSWAEI-- 531
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVALKHT---------APFRNVFLHGFVVDEKGAKM 815
+K VY+EG DQ GWF SSLL+ VA + APFR + HGF +D +G KM
Sbjct: 532 EKQVDVYLEGSDQHRGWFQSSLLSYVAAQKADGKPAGSIVAPFRTLITHGFTLDAQGKKM 591
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GN IS ++ G PA K + + A G D LR W A
Sbjct: 592 SKSLGNTISPEEVMDGRLLPPAKRKG-----------KNTGQPDALGPDALRLW-AGSCD 639
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQN 935
+PIG IL + + + R+ L+ LLG LH S +++ + +L +
Sbjct: 640 FTTDIPIGPTILQPVHNALVRYRTILKMLLGSLHESSRR-APLTKLDHIALL----QLST 694
Query: 936 TMDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
TM+ + Y ++ + +L ++ +LSAFY +KDRLYC G +
Sbjct: 695 TMEQVWEAYNSHEFHKGVGLLNRWLSTDLSAFYLEALKDRLYCGDGGG--------AIEP 746
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGE 1052
I LLR +AP+ P L EE +++ PS S H L S I ++ + CD
Sbjct: 747 IMVGLLRMLAPVTPVLVEEAWANRPSWMVEDDSMVHPAKQLYKSPVIDRKRVTCDEAKLR 806
Query: 1053 ARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
+ L T+H L LA+EV S L
Sbjct: 807 EDIPKLSTVHEAIKAGLEPA-----RLAKEVGSSL 836
Score = 328 bits (842), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 177/403 (43%), Positives = 242/403 (60%), Gaps = 13/403 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y+WQ + FILHDGPPYANG H GH++NKILKD+ +R + G+RV Y PGW
Sbjct: 21 EFYTWQSSRPSEDEPFILHDGPPYANGPLHTGHSINKILKDMIIRVQVQNGRRVLYRPGW 80
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE+KA+ T+ K L+P+ +RK+A+ A +T+ Q F S+ V+++W+ N + T
Sbjct: 81 DCHGLPIEMKALGTAGTKGLTPVQVRKQARKLATKTVTEQMKGFRSFAVMSEWD-NKWTT 139
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D+ + QL F + + IYR KPVYWSPSS TALAE+ELEYK DH+S S Y++
Sbjct: 140 MDRAFEIRQLRVFQKMVRHGLIYRKNKPVYWSPSSGTALAEAELEYKDDHLSTSAYIRFP 199
Query: 185 LNQ---VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + L L+A IWTTTPW+LPAN+ I + L Y+V V G ++VA
Sbjct: 200 ITSDYTTISELRNFDGPLYAAIWTTTPWTLPANKAIGVHNDLLYAVLRVNGYGLLVASSR 259
Query: 242 VESLKWTFQTDIEVVCD-FPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLVHC 299
+E+++ EVV D PG L + Y + + K + A FVS+ GTGLVH
Sbjct: 260 IEAVR-ELVPGAEVVADAIPGSKLAGLQYRNKLRGKSAPAHPIFHADFVSADSGTGLVHL 318
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLVE 354
AP HGQDD+ + L I I N G+++ +A P +IL G VL LV
Sbjct: 319 APGHGQDDYEICLEHGIEAFAPIDNDGRFTAEAYPDDPEVLTSAPSILDGGSSSVLDLVA 378
Query: 355 PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
DV+ T+ QH YPYDWR+KKPV+++A+ QWF D IK +AL
Sbjct: 379 EDVIATQEIQHKYPYDWRSKKPVVIRATAQWFADVGSIKDDAL 421
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 1109 ITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
I N G+++ +A P +IL G VL LV DV+ T+ QH YPYDWR+KKP
Sbjct: 341 IDNDGRFTAEAYPDDPEVLTSAPSILDGGSSSVLDLVAEDVIATQEIQHKYPYDWRSKKP 400
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+++A+ QWF D IK +AL+ L+ V FVP+S + L I R WCISRQR WGVPI
Sbjct: 401 VVIRATAQWFADVGSIKDDALSALKNVKFVPDSGRARLESFIKGRSEWCISRQRSWGVPI 460
Query: 1224 PVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWS 1256
P YD + ++N I H ++ E D W+S
Sbjct: 461 PALYDRNGEAVMNAETIDHIINVMQERTSDAWFS 494
>gi|430812569|emb|CCJ30028.1| unnamed protein product [Pneumocystis jirovecii]
Length = 891
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/626 (36%), Positives = 347/626 (55%), Gaps = 55/626 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAESEL YK ++IS ++Y K L N + ++ALIWTTTPW+LPAN+
Sbjct: 134 TALAESELVYKDNYISSAVYAKFPLVDLGNLSTMINAKNYKQIYALIWTTTPWTLPANRA 193
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
I + +EY + + + ++IVA +++L + + +F G+ L TY +P++K
Sbjct: 194 IFIHEDMEYVIVDTAQHGSLIVAHNRIDHLPKSLNIS-QISLNFFGKMLLKTTYYNPLDK 252
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ L A +V+S GTGLVH AP HG DD+ + + I + + + + G ++ D G
Sbjct: 253 NDQILPFYHAAYVTSESGTGLVHAAPGHGIDDYKVCMQHNIDIFSPVDDYGCFTKDVLNG 312
Query: 593 -LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
LE L +LG+G +V+ L+ ++ +ENY H YP DWRTK+PVIL+A+ QWFID ERI
Sbjct: 313 ELESLFVLGEGNKKVIELLNTREMLVHSENYVHRYPCDWRTKEPVILRATAQWFIDLERI 372
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTIIVNE 706
K + L+ V +PES + L I R WCISRQR WGVPIPV Y+ G+ +++ E
Sbjct: 373 KYHCIKALQNVKMIPESGRARLVSFIQSRSEWCISRQRAWGVPIPVLYNLETGEPLLIVE 432
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQL-----LNTSDVNSNVTKSNDILDIWFDSGISWSH 761
NI+H I ++G D WW S + SDV K + +D+WFDSG+SW+
Sbjct: 433 -NIQHIIGTIKKYGMDAWWENSDSDIWIAPKYRKSDV--KYKKGRETMDVWFDSGVSWNV 489
Query: 762 VLKDK---------PAHVYMEGMDQINGWFMSSLLTSVALKHT---APFRNVFLHGFVVD 809
+ + P + +EG DQ GWF S L T ++ +H AP++ V HG ++D
Sbjct: 490 ISNESHGILMSNNPPIDLVIEGSDQHRGWFQSLLFTFISFQHNSNIAPYKIVLTHGHILD 549
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
+ KMSKS+GNV++ DI G K + +K PAYG+DVLR W
Sbjct: 550 KYNQKMSKSIGNVMNPKDIIFGGKDI--------------------EKDPAYGIDVLRLW 589
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS--ESTGSISRYVDVYML 927
V + + I +L + + +KIR++LR+LLG L++ S E + +D Y L
Sbjct: 590 VTGSDFTN-DINISSTVLKNVAEMQRKIRATLRFLLGNLYDWSGNELEYKDLKKIDQYAL 648
Query: 928 KRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGL 987
+L EF + LY +F + + + N+ N+LS+FYF+++KDRLY D ++R+
Sbjct: 649 LQLYEFNFKVRELYDKFLFVQVVHTIANYTNNQLSSFYFSIIKDRLYADHRTSKSRIGSQ 708
Query: 988 HTLHNIFHVLLRTVAPIMPHLAEEVY 1013
L +IF + ++PI+P LA E +
Sbjct: 709 TVLFHIFLNYVSIISPIIPLLALEAW 734
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 224/368 (60%), Gaps = 13/368 (3%)
Query: 37 GHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSKDKLLS---PLDIRKKA 93
GHA NKILKD+ LR N++ G+RV Y PGWDCHGLPIE K I D S P R++A
Sbjct: 8 GHAFNKILKDVILRINIMNGQRVLYTPGWDCHGLPIETKIIEKHDWERSYEFPEKTRQEA 67
Query: 94 KNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPV 153
+ + E I QK F+ GV+ DW+ + Y T D Y QL F N+ ++ IYR KPV
Sbjct: 68 RKYVSEIIKCQKKGFKDLGVIGDWDKS-YQTMDLSYSIFQLEVFKNMVEKGLIYRSCKPV 126
Query: 154 YWSPSSRTALAESELEYKPDHVSKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPW 209
YWSPSS+TALAESEL YK +++S ++Y K L N + ++ALIWTTTPW
Sbjct: 127 YWSPSSKTALAESELVYKDNYISSAVYAKFPLVDLGNLSTMINAKNYKQIYALIWTTTPW 186
Query: 210 SLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDIT 268
+LPAN+ I + +EY + + + ++IVA ++ L + ++ +F G+ L T
Sbjct: 187 TLPANRAIFIHEDMEYVIVDTAQHGSLIVAHNRIDHLPKSLNIS-QISLNFFGKMLLKTT 245
Query: 269 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 328
Y +P++K + L A +V+S GTGLVH AP HG DD+ + + I + + + + G +
Sbjct: 246 YYNPLDKNDQILPFYHAAYVTSESGTGLVHAAPGHGIDDYKVCMQHNIDIFSPVDDYGCF 305
Query: 329 SPDAGPG-LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 385
+ D G LE L +LG+G +V+ L+ ++ +ENY H YP DWRTK+PVIL+A+ QW
Sbjct: 306 TKDVLNGELESLFVLGEGNKKVIELLNTREMLVHSENYVHRYPCDWRTKEPVILRATAQW 365
Query: 386 FIDTERIK 393
FID ERIK
Sbjct: 366 FIDLERIK 373
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 96/153 (62%), Gaps = 7/153 (4%)
Query: 1109 ITNQGKYSPDAGPG-LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 1165
+ + G ++ D G LE L +LGEG +V+ L+ ++ +ENY H YP DWRTK+PVI
Sbjct: 299 VDDYGCFTKDVLNGELESLFVLGEGNKKVIELLNTREMLVHSENYVHRYPCDWRTKEPVI 358
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
L+A+ QWFID ERIK + L+ V +PES + L I R WCISRQR WGVPIPV
Sbjct: 359 LRATAQWFIDLERIKYHCIKALQNVKMIPESGRARLVSFIQSRSEWCISRQRAWGVPIPV 418
Query: 1226 FYD---GDTIIVNEANIKHFCTLIDEHGPDFWW 1255
Y+ G+ +++ E NI+H I ++G D WW
Sbjct: 419 LYNLETGEPLLIVE-NIQHIIGTIKKYGMDAWW 450
>gi|119488654|ref|XP_001262777.1| isoleucyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
gi|119410935|gb|EAW20880.1| isoleucyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
Length = 1010
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 335/641 (52%), Gaps = 49/641 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L VP L + DL A+IWTTTPW+LPAN
Sbjct: 201 GTALAEAELEYKDDHVSTAALVKFPLASVPPQLAQDPLVQLKDLSAVIWTTTPWTLPANA 260
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA + +L+Y V S +++A+ E L+ + D+ V+ G L + T P+
Sbjct: 261 VIAVHESLDYMIVQSDTHGQLLIAQSRFEYLEHMLKEDLTVIIPSIRGSELAEQTMYRPL 320
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K + + ++ A FV++ G+GLVHCAP HG DD+ + IP + + G+++
Sbjct: 321 FKSTDAKPQPIIAADFVTADSGSGLVHCAPGHGMDDYEACVPRGIPAFAPVDDHGRFTDK 380
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++LG+G VL +E +L Y+H YPYDWR+K P+I++A++QW
Sbjct: 381 AMPSDPARLSGKSVLGEGTAAVLEYIESQGYLLAKHQYEHKYPYDWRSKLPIIIRATEQW 440
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---G 699
F D I+ A+ LE+V FVP S K+ L + + R WCISRQR WGVPIP Y+ G
Sbjct: 441 FADVADIRNSAVKALEDVKFVPSSGKQRLENFVKNRSEWCISRQRAWGVPIPALYNRATG 500
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-----LLNTSDVNSNVTKSNDILDIWFD 754
D ++ ++ + H ++I+E G D WW+ + + S + D +D+WFD
Sbjct: 501 DAVLTRDS-VSHIMSVIEERGIDAWWTDDMNDPAWIPPTLREEPGSGYKRGTDTMDVWFD 559
Query: 755 SGISWSHV----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT--------APFRNVF 802
SG SW+ + PA VY+EG DQ GWF S LLT ++ + APF+N+
Sbjct: 560 SGTSWTEIDTPPRDGYPADVYLEGTDQHRGWFQSGLLTYISHQLASGQTATPRAPFKNLV 619
Query: 803 LHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY- 861
HGF +DE+G KMSKS+GNVI I G LP + G Q K P Y
Sbjct: 620 THGFTLDEEGRKMSKSIGNVIHPQSIMDGT-LLPPLKPRKGKG------KQQENKEPVYD 672
Query: 862 --GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN---HSESTG 916
G D LR W AA + V IGK +L + + K R + + LLG L + +
Sbjct: 673 ALGPDALRMW-AASSDYTRDVVIGKQVLQTVNTSLHKFRVTFKLLLGALSDFRPQDQLPY 731
Query: 917 SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
S + VD L L E T F++ +A + + + SAFY +KDRLY
Sbjct: 732 SQLQQVDRMALLHLSEMVLTCQKACENFEFYKAVNAMNRWANLQFSAFYMEAIKDRLYTY 791
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ +R + TL +I++ L +API P L EE + H P
Sbjct: 792 GESSTSRRAAQTTLFHIYNYLQEILAPITPLLVEETWEHTP 832
Score = 328 bits (840), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/412 (43%), Positives = 247/412 (59%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQR F+LHDGPPYANG H+GHA+NKILKDI R L +GKRV YVPGW
Sbjct: 42 ELYAWQRRERPADRPFVLHDGPPYANGDLHVGHALNKILKDIICRVQLAKGKRVRYVPGW 101
Query: 66 DCHGLPIELKAITSKDKL------LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ + +L + IR+ A+ A T+ Q F S+GV+ADW+
Sbjct: 102 DCHGLPIELKALELQKELGNTGGSIGAAAIRRAARKLAGRTVKEQMKGFRSFGVMADWDG 161
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+ + T DKE+ K QL F + + IYR KPVYWSPS+ TALAE+ELEYK DHVS +
Sbjct: 162 H-WKTMDKEFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAEAELEYKDDHVSTAA 220
Query: 180 YLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGAN 234
+K L VP L + DL A+IWTTTPW+LPAN IA + +L+Y V S
Sbjct: 221 LVKFPLASVPPQLAQDPLVQLKDLSAVIWTTTPWTLPANAVIAVHESLDYMIVQSDTHGQ 280
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
+++A+ E L+ + D+ V+ G L + T P+ K + + ++ A FV++
Sbjct: 281 LLIAQSRFEYLEHMLKEDLTVIIPSIRGSELAEQTMYRPLFKSTDAKPQPIIAADFVTAD 340
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKD 347
G+GLVHCAP HG DD+ + IP + + G+++ A P L G ++LG+G
Sbjct: 341 SGSGLVHCAPGHGMDDYEACVPRGIPAFAPVDDHGRFTDKAMPSDPARLSGKSVLGEGTA 400
Query: 348 QVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VL +E +L Y+H YPYDWR+K P+I++A++QWF D I+ A+
Sbjct: 401 AVLEYIESQGYLLAKHQYEHKYPYDWRSKLPIIIRATEQWFADVADIRNSAV 452
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 95/157 (60%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + G+++ A P L G ++LGEG VL +E +L Y+H YPYDWR+K
Sbjct: 371 VDDHGRFTDKAMPSDPARLSGKSVLGEGTAAVLEYIESQGYLLAKHQYEHKYPYDWRSKL 430
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ A+ LE V FVP S K+ L + + R WCISRQR WGVP
Sbjct: 431 PIIIRATEQWFADVADIRNSAVKALEDVKFVPSSGKQRLENFVKNRSEWCISRQRAWGVP 490
Query: 1223 IPVFYD---GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y+ GD ++ ++ + H ++I+E G D WW+
Sbjct: 491 IPALYNRATGDAVLTRDS-VSHIMSVIEERGIDAWWT 526
>gi|323454274|gb|EGB10144.1| hypothetical protein AURANDRAFT_10097, partial [Aureococcus
anophagefferens]
Length = 1008
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/659 (36%), Positives = 344/659 (52%), Gaps = 66/659 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ--VPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+ELEY H S S+Y + + + + G D +WTTTPW+LPAN +A
Sbjct: 200 TALAEAELEYPDGHTSPSVYAALDVLEPSAGLAAVAGGADAKLAVWTTTPWTLPANLAVA 259
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ- 534
N L+Y+V ++VA LV+ L F ++ V G L TY P+
Sbjct: 260 VNGDLDYAVVDSPKGALVVAVDLVDALAAKFACELTVRGSLKGAALAGTTYARPVANGAL 319
Query: 535 --RDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R ++ G +++S GTGLVH AP HG DD+ L +P + + GK++ DAG
Sbjct: 320 GARPAAVVVGGDYITSEGGTGLVHTAPGHGMDDYQTGLKHDLPPFSPVDAAGKFTADAGD 379
Query: 592 GLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
GLEGL +LG G +++ +E ++L E Y+H YPYDWRTKKPV+++A+ QWF
Sbjct: 380 GLEGLPVLGAGGEEIAARLEAAGNLLLAEPYEHRYPYDWRTKKPVLMRATDQWFASVSSF 439
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGDTIIVNE 706
+ +AL ++ V + P + + QR WCISRQR WGVP+PVFY G+ ++ E
Sbjct: 440 RQDALDAIDAVKWTPPVGRNRIAAMTEQRGDWCISRQRSWGVPLPVFYAKATGEPLVTPE 499
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL---NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
++H L+ E G D W+ L V LL D + K D +D+WFDSG SW+ V+
Sbjct: 500 -TLEHVEALVAEKGSDAWFELDVADLLPPGELRDAADDYVKGTDTMDVWFDSGTSWAGVV 558
Query: 764 KDK---------PAHVYMEGMDQINGWFMSSLLTSVALK-------HTAPFRNVFLHGFV 807
+ + PA +Y+EG DQ GWF SSLLTSVA + AP++ V HGFV
Sbjct: 559 EQRAELGKGGGAPADLYLEGSDQHRGWFQSSLLTSVACRGAAGGGNKGAPYKAVLTHGFV 618
Query: 808 VDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLR 867
+DEKG KMSKS+GNV+ + +G K AK P YG DVLR
Sbjct: 619 LDEKGFKMSKSLGNVVDPRVVIEGGKN--------------------AKVDPPYGADVLR 658
Query: 868 WWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNH-SESTGSISRY----- 921
WVA+ V +GKN L + +K+R++LRY+ G ++ + T + + Y
Sbjct: 659 LWVAS-VDYTADVRLGKNALKQVFEQYRKLRNTLRYMAGNVNGAPTRGTDAFAAYDARDA 717
Query: 922 --------VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
+D ++L RL + Y +Q++RA + F VNELSA Y + KDR+
Sbjct: 718 RTYASLPDLDKWLLGRLGALERECFDAYENYQFSRAVGAISAFAVNELSALYLDVAKDRM 777
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVY 1032
Y R++ + TL VL R +AP++PHLAEE++ LP G S V+
Sbjct: 778 YVSPAKAGRRVTCMATLVACLDVLPRLLAPLLPHLAEELFQALPYAAGDAYSAERGSVF 836
Score = 320 bits (819), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 237/399 (59%), Gaps = 23/399 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK---AI 77
F LHDGPPYANG HIGHA+NK+LKD R L+G +V YVPGWDCHGLPIELK AI
Sbjct: 47 FTLHDGPPYANGDLHIGHALNKVLKDFINRYRSLRGDKVRYVPGWDCHGLPIELKVLQAI 106
Query: 78 TSKDKL-----------LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFD 126
+++K L+PL++R++A FA ET+ Q+ F +GV ADW+ Y T
Sbjct: 107 NAENKKIKKKTGATPPPLTPLELRRRAAGFAEETVAAQRDSFRRYGVWADWDAP-YLTLQ 165
Query: 127 KEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN 186
Y QL F +++Q +IYR LKPV++SPSSRTALAE+ELEY H S S+Y + +
Sbjct: 166 PAYEAAQLRVFATMFEQGHIYRGLKPVWYSPSSRTALAEAELEYPDGHTSPSVYAALDVL 225
Query: 187 Q--VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ + G D +WTTTPW+LPAN +A N L+Y+V ++VA LV++
Sbjct: 226 EPSAGLAAVAGGADAKLAVWTTTPWTLPANLAVAVNGDLDYAVVDSPKGALVVAVDLVDA 285
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINK---EQRDLKLLPAG-FVSSSKGTGLVHCA 300
L F ++ V G L TY P+ R ++ G +++S GTGLVH A
Sbjct: 286 LAAKFACELTVRGSLKGAALAGTTYARPVANGALGARPAAVVVGGDYITSEGGTGLVHTA 345
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVL 358
P HG DD+ L +P + + GK++ DAG GLEGL +LG G +++ +E ++L
Sbjct: 346 PGHGMDDYQTGLKHDLPPFSPVDAAGKFTADAGDGLEGLPVLGAGGEEIAARLEAAGNLL 405
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E Y+H YPYDWRTKKPV+++A+ QWF + +AL
Sbjct: 406 LAEPYEHRYPYDWRTKKPVLMRATDQWFASVSSFRQDAL 444
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 6/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ GK++ DAG GLEGL +LG G +++ +E ++L E Y+H YPYDWRTKKPV++
Sbjct: 367 VDAAGKFTADAGDGLEGLPVLGAGGEEIAARLEAAGNLLLAEPYEHRYPYDWRTKKPVLM 426
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + +AL ++ V + P + + QR WCISRQR WGVP+PVF
Sbjct: 427 RATDQWFASVSSFRQDALDAIDAVKWTPPVGRNRIAAMTEQRGDWCISRQRSWGVPLPVF 486
Query: 1227 Y---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y G+ ++ E ++H L+ E G D W+ L V LL
Sbjct: 487 YAKATGEPLVTPE-TLEHVEALVAEKGSDAWFELDVADLL 525
>gi|37523220|ref|NP_926597.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
gi|81708786|sp|Q7NF75.1|SYI_GLOVI RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|35214223|dbj|BAC91592.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
Length = 983
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/671 (34%), Positives = 338/671 (50%), Gaps = 85/671 (12%)
Query: 418 TALAESELEY------KPDHISKSIYLKIKLNQVPA---------HLLEGATDLH----- 457
TALAE+ELEY P H S+S+Y+K L + A LL + H
Sbjct: 197 TALAEAELEYPTKDDGSPAHTSRSVYVKFPLISIAAPETATVMAAELLPRLSAFHDREEE 256
Query: 458 ----------------ALIWTTTPWSLPANQFIAFNPALEYS-VASVKGANVIVAKCLVE 500
IWTTTPW+LP N +A N L+Y+ VAS + +IVA LVE
Sbjct: 257 LIDALLGERDDLPEIAVAIWTTTPWTLPGNLAVALNGELDYALVASDEHGLLIVAAELVE 316
Query: 501 NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 560
L T T + + F G+ L+ HP+ + R ++ V++ GTG VH AP H
Sbjct: 317 RLAGTLATRFETIATFRGRELEGSLLAHPLFR--RTSPIVLGDHVTTESGTGAVHTAPGH 374
Query: 561 GQDDFLLALAEKIPVLNLITNQGKYSPDAG-------PGLEGLNILGDGKDQVLHLVEPD 613
G +DF LA + VL+ + + G+++ +A P G +L DG V+ +
Sbjct: 375 GSEDFELAQRYNLGVLSPVDDYGRFTREADSDRRENLPVFAGKAVLSDGNQAVIEALSAA 434
Query: 614 --VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTL 671
+L E Y H YPYDWRTKKP I +A+ QWF +P+AL+ + + ++P S + +
Sbjct: 435 GALLKEEAYVHKYPYDWRTKKPTIFRATTQWFASVSDFRPQALSAIAQTEWIPASGENRI 494
Query: 672 RDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSV 729
+A R WCISRQR WG+PIP FY + +++ + +++ + HG D WW
Sbjct: 495 TAMVAGRNDWCISRQRAWGLPIPAFYCENCANVLLTQESVEAVQAAVRVHGSDIWWQKEA 554
Query: 730 EQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQIN 779
+LL + K DI+D+WFDSG SW+ VL + PA VY+EG DQ
Sbjct: 555 SELLPPGIACAHCGGTAFRKEKDIMDVWFDSGSSWAGVLGRRPELHYPADVYLEGSDQHR 614
Query: 780 GWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYE 839
GWF SSLLT VA + TAP++ V HGF +DE G KMSKS+GNV+ + G
Sbjct: 615 GWFQSSLLTCVATEGTAPYKTVITHGFTLDEHGRKMSKSLGNVVDPKLVIDGGAN----- 669
Query: 840 KSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRS 899
K+ PAYG DVLR WVA+ + +G ++L + +KIR+
Sbjct: 670 ---------------QKQHPAYGADVLRLWVASVDYTSDQL-VGPSVLAQIAEVYRKIRN 713
Query: 900 SLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLN 955
+ RYLLG L++ ++ VD Y+L RL + + +Q++R + + N
Sbjct: 714 TARYLLGSLNDFVPERDLVAFDSLGEVDQYLLHRLSVVHLEVTQAFESYQFSRFFQTIQN 773
Query: 956 FVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
F V +LS FY + KDRLY + R S L+ + L R +AP++PHLAE+++ H
Sbjct: 774 FCVADLSNFYLDISKDRLYISAEVSLRRRSCQTVLYRVLESLTRLIAPVLPHLAEDIWQH 833
Query: 1016 LPSRQGTFSSF 1026
LP + S F
Sbjct: 834 LPYPRSDASVF 844
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/427 (42%), Positives = 239/427 (55%), Gaps = 53/427 (12%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG H+GHA+NKILKDI R LLQG+RV YVPGWDCHGLPIELK +
Sbjct: 54 FILHDGPPYANGELHVGHALNKILKDIINRYQLLQGRRVRYVPGWDCHGLPIELKVLQDL 113
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
++ L+PLD+R +A++FA T+ +Q A ++ +GV DW+H Y T EY QL
Sbjct: 114 SQAERSQLTPLDVRTRARDFAQRTVQSQCASYKRFGVWGDWDHP-YLTLQPEYEAAQLGV 172
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEY------KPDHVSKSIYLKIKLNQV-- 188
F + + YIYR LKPV+WSPSS+TALAE+ELEY P H S+S+Y+K L +
Sbjct: 173 FGKMALKGYIYRGLKPVHWSPSSQTALAEAELEYPTKDDGSPAHTSRSVYVKFPLISIAA 232
Query: 189 -------PAHLLEGATDLH---------------------ALIWTTTPWSLPANQFIAFN 220
A LL + H IWTTTPW+LP N +A N
Sbjct: 233 PETATVMAAELLPRLSAFHDREEELIDALLGERDDLPEIAVAIWTTTPWTLPGNLAVALN 292
Query: 221 PALEYS-VASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRD 279
L+Y+ VAS + +IVA LVE L T T E + F G+ L+ HP+ + R
Sbjct: 293 GELDYALVASDEHGLLIVAAELVERLAGTLATRFETIATFRGRELEGSLLAHPLFR--RT 350
Query: 280 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG------ 333
++ V++ GTG VH AP HG +DF LA + VL+ + + G+++ +A
Sbjct: 351 SPIVLGDHVTTESGTGAVHTAPGHGSEDFELAQRYNLGVLSPVDDYGRFTREADSDRREN 410
Query: 334 -PGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 390
P G +L DG V+ + +L E Y H YPYDWRTKKP I +A+ QWF
Sbjct: 411 LPVFAGKAVLSDGNQAVIEALSAAGALLKEEAYVHKYPYDWRTKKPTIFRATTQWFASVS 470
Query: 391 RIKPEAL 397
+P+AL
Sbjct: 471 DFRPQAL 477
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 34/253 (13%)
Query: 1034 QYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGT 1093
+ +G++A R + G L + H L R +PI+ + H+ + GT
Sbjct: 317 RLAGTLATRFETIATFRGRELEGSL-----LAHPLFRRTSPIV------LGDHVTTESGT 365
Query: 1094 FSSFC-------HFKVYHHLNL-----ITNQGKYSPDAG-------PGLEGLNILGEGKD 1134
+ F++ NL + + G+++ +A P G +L +G
Sbjct: 366 GAVHTAPGHGSEDFELAQRYNLGVLSPVDDYGRFTREADSDRRENLPVFAGKAVLSDGNQ 425
Query: 1135 QVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNF 1192
V+ + +L E Y H YPYDWRTKKP I +A+ QWF +P+AL+ + +
Sbjct: 426 AVIEALSAAGALLKEEAYVHKYPYDWRTKKPTIFRATTQWFASVSDFRPQALSAIAQTEW 485
Query: 1193 VPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHG 1250
+P S + + +A R WCISRQR WG+PIP FY + +++ + +++ + HG
Sbjct: 486 IPASGENRITAMVAGRNDWCISRQRAWGLPIPAFYCENCANVLLTQESVEAVQAAVRVHG 545
Query: 1251 PDFWWSLPVEQLL 1263
D WW +LL
Sbjct: 546 SDIWWQKEASELL 558
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 981 EARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQ-GTFSSFCHFKVYLQYSGSI 1039
E L +L + LL ++ + + + S+ SR T +FC + Y I
Sbjct: 728 ERDLVAFDSLGEVDQYLLHRLSVVHLEVTQAFESYQFSRFFQTIQNFCVADLSNFYL-DI 786
Query: 1040 AKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
+K LY + R S L+ + L R +AP++PHLAE+++ HLP + S F
Sbjct: 787 SKDRLYISAEVSLRRRSCQTVLYRVLESLTRLIAPVLPHLAEDIWQHLPYPRSDASVF 844
>gi|70982524|ref|XP_746790.1| isoleucyl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|66844414|gb|EAL84752.1| isoleucyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
gi|159122969|gb|EDP48089.1| isoleucyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
Length = 1009
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 339/641 (52%), Gaps = 50/641 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + ++ L VP L + DL A+IWTTTPW+LPAN
Sbjct: 201 GTALAEAELEYKDDHVSTAALVRFPLVSVPPQLAQDPLVQLKDLSAVIWTTTPWTLPANA 260
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA + +L+Y V S +++A+ +E L+ + D+ V+ G L D T P+
Sbjct: 261 VIAVHGSLDYMIVQSDTHGQLLIAQSRLEYLEHMLKEDLTVIIPSIRGSELADQTKYRPL 320
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K + ++ A FV++ G+GLVHCAP HG DD+ + IP + + G+++
Sbjct: 321 FKSADAEPQPIIAADFVTADSGSGLVHCAPGHGMDDYEACVPRGIPAFAPVDDHGRFTDK 380
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++LG+G VL +E +L Y+H YPYDWR+K P+I++A++QW
Sbjct: 381 AMPSDPTRLSGKSVLGEGTVAVLEYIESQGYLLAKHEYEHKYPYDWRSKLPIIIRATEQW 440
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---G 699
F D I+ A+ LE+V FVP S K+ L + + R WCISRQR WGVPIP Y+ G
Sbjct: 441 FADVADIRDSAVKALEDVRFVPSSGKQRLENFVKNRSEWCISRQRAWGVPIPALYNRATG 500
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-----LLNTSDVNSNVTKSNDILDIWFD 754
D ++ ++ + H ++IDE G D WW+ + + S + D +D+WFD
Sbjct: 501 DAVLTRDS-VSHIMSVIDERGIDAWWTDDMNDPAWIPPTLREESASGYRRGTDTMDVWFD 559
Query: 755 SGISWSHV----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT--------APFRNVF 802
SG SW+ + PA VY+EG DQ GWF S LLT ++ + APF+N+
Sbjct: 560 SGTSWTEIDTPPRDGCPADVYLEGTDQHRGWFQSGLLTYISHQLASGQTATPRAPFKNLV 619
Query: 803 LHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL--PA 860
HGF +DE+G KMSKS+GNVI I G LP + G Q K+L A
Sbjct: 620 THGFTLDEEGRKMSKSIGNVIHPQSIMDGT-LLPPLKPRKGKG------KQQNKELVYDA 672
Query: 861 YGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN---HSESTG 916
G D LR WVA+ ++D V IGK +L + + K R + + LLG L + +
Sbjct: 673 LGPDALRMWVASSDYTRD--VVIGKQVLQTVNTSLHKFRVTFKLLLGALSDFRPQDQLPY 730
Query: 917 SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
S + VD L L E T F++ +A + + + SAFY +KDRLY
Sbjct: 731 SQLQQVDRMALLHLSEMVLTCQKACENFEFYKAVNAMNRWANLQFSAFYMEAIKDRLYTY 790
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ +R + TL +I++ L +API P L EE + H P
Sbjct: 791 GESSTSRRAAQTTLFHIYNYLQEILAPITPLLVEETWEHTP 831
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/412 (43%), Positives = 247/412 (59%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQR F+LHDGPPYANG HIGHA+NKILKDI R L +GKRV YVPGW
Sbjct: 42 ELYAWQRRERPADRPFVLHDGPPYANGDLHIGHALNKILKDIICRVQLAKGKRVRYVPGW 101
Query: 66 DCHGLPIELKAITSKDKL------LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ + +L + IR+ A+ A T+ Q F S+GV+ADW+
Sbjct: 102 DCHGLPIELKALDLQKELGNTGGSIGAAAIRRAARKLAGRTVKEQMKGFRSFGVMADWDG 161
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+ + T DKE+ K QL F + + IYR KPVYWSPS+ TALAE+ELEYK DHVS +
Sbjct: 162 H-WKTMDKEFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAEAELEYKDDHVSTAA 220
Query: 180 YLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGAN 234
++ L VP L + DL A+IWTTTPW+LPAN IA + +L+Y V S
Sbjct: 221 LVRFPLVSVPPQLAQDPLVQLKDLSAVIWTTTPWTLPANAVIAVHGSLDYMIVQSDTHGQ 280
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
+++A+ +E L+ + D+ V+ G L D T P+ K + ++ A FV++
Sbjct: 281 LLIAQSRLEYLEHMLKEDLTVIIPSIRGSELADQTKYRPLFKSADAEPQPIIAADFVTAD 340
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKD 347
G+GLVHCAP HG DD+ + IP + + G+++ A P L G ++LG+G
Sbjct: 341 SGSGLVHCAPGHGMDDYEACVPRGIPAFAPVDDHGRFTDKAMPSDPTRLSGKSVLGEGTV 400
Query: 348 QVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
VL +E +L Y+H YPYDWR+K P+I++A++QWF D I+ A+
Sbjct: 401 AVLEYIESQGYLLAKHEYEHKYPYDWRSKLPIIIRATEQWFADVADIRDSAV 452
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + G+++ A P L G ++LGEG VL +E +L Y+H YPYDWR+K
Sbjct: 371 VDDHGRFTDKAMPSDPTRLSGKSVLGEGTVAVLEYIESQGYLLAKHEYEHKYPYDWRSKL 430
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ A+ LE V FVP S K+ L + + R WCISRQR WGVP
Sbjct: 431 PIIIRATEQWFADVADIRDSAVKALEDVRFVPSSGKQRLENFVKNRSEWCISRQRAWGVP 490
Query: 1223 IPVFYD---GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y+ GD ++ ++ + H ++IDE G D WW+
Sbjct: 491 IPALYNRATGDAVLTRDS-VSHIMSVIDERGIDAWWT 526
>gi|116182640|ref|XP_001221169.1| hypothetical protein CHGG_01948 [Chaetomium globosum CBS 148.51]
gi|88186245|gb|EAQ93713.1| hypothetical protein CHGG_01948 [Chaetomium globosum CBS 148.51]
Length = 947
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/631 (37%), Positives = 340/631 (53%), Gaps = 55/631 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEG-ATDLHALIWTTTPWSLPAN 471
GTALAE+ELEY H+SK+ Y++ + +P LEG L A+IWTTTPW+LPAN
Sbjct: 189 GTALAEAELEYNDAHVSKAAYIRFPVVGGYEDLPG--LEGFGGRLFAVIWTTTPWTLPAN 246
Query: 472 QFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD--IDVVCDFPGQYLQDITYIHP 529
+ IA + L Y + V +VA+ +E + F ++V G L + Y++
Sbjct: 247 RAIAVHEDLAYHIVKVGADAFLVAENCLERIAKLFGEGAVFEIVGTVKGSQLTQLRYLNV 306
Query: 530 I-NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
+ K + FV+ G+GLVHCAP HG DD+L L+ I V + N G ++ +
Sbjct: 307 LRGKSAEPQPFMHGSFVTDGSGSGLVHCAPGHGFDDYLACLSLGISVSAPVDNDGLFTEE 366
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
A P L+G+++L G D VL+++ DVL NYQH YPYDWRTKKP+I++A+ QWF
Sbjct: 367 AFPDHPHRLKGISVLDGGSDAVLNILGDDVLDVHNYQHKYPYDWRTKKPIIIRATAQWFA 426
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD-GDTII 703
D IK +AL +V FVPE+ K L I R WCISRQR WGVPIP Y+ +
Sbjct: 427 DVGTIKDDALGATGQVQFVPENGKNRLEAFIKGRSEWCISRQRAWGVPIPALYEPTGNAV 486
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNSNVTKSNDILDIWFDSGISWS 760
++E I H ++I E G D WW+ + E + + ++ D +D+WFDSG SW+
Sbjct: 487 MSEEVIDHIISVIQERGTDAWWTDAPEDPAWIPESLRGKGEYSRGRDTMDVWFDSGTSWT 546
Query: 761 HVLKDKPAHVYMEGMDQINGWFMSSLLTSVA--LKHTA----------PFRNVFLHGFVV 808
+ DK A +Y+EG DQ GWF SSLLT VA H+A PF+ + HGF +
Sbjct: 547 --MMDKQADLYLEGSDQHRGWFQSSLLTRVAAMADHSAKSTTNTLGLSPFKTLITHGFTL 604
Query: 809 DEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRW 868
D++G KMSKS+GN+ISA + G+ LP + +V + A A G D LR
Sbjct: 605 DKEGKKMSKSLGNIISADQVMDGS-LLPPLKPRKSDV-------RPAPVKDALGPDALRL 656
Query: 869 WVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYM 926
WV AS D T + +G+ +L + + K R +++ L G +H S T ++ +D
Sbjct: 657 WV---ASSDYTRDIVLGEPVLTTIHQALLKYRITIKMLTGSMHP-SACTAPLT-TLDQIA 711
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L +L + + Y ++ +A L ++ N+LSAFY +KDRLYC G
Sbjct: 712 LLQLGDVMAEVGRHYDAHEFNKAFNALNRWLTNDLSAFYLEALKDRLYCADGGG------ 765
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
L +F LLR +API P L EE + H P
Sbjct: 766 --VLEPLFFGLLRMLAPITPVLVEEAWEHRP 794
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/405 (44%), Positives = 243/405 (60%), Gaps = 16/405 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+ Y WQ EF+LHDGPPYANG+ H GHA+NKILKDI LR + QG+RV Y+PGW
Sbjct: 35 DFYKWQLANRPADDEFVLHDGPPYANGSLHAGHALNKILKDIILRVKVQQGRRVSYIPGW 94
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIELKA+ + K +S IRK A+ A +T+ Q F ++ V+ADW+ + T
Sbjct: 95 DCHGLPIELKAVDAAAGKRMSAGAIRKAARKLAAKTVVDQMKSFRTYAVMADWDAR-WTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D Y QL F + ++ +YR KPVYWSPSS TALAE+ELEY HVSK+ Y++
Sbjct: 154 MDTAYEIRQLRLFRQMARRGLVYRKFKPVYWSPSSGTALAEAELEYNDAHVSKAAYIRFP 213
Query: 185 L----NQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
+ +P LEG L A+IWTTTPW+LPAN+ IA + L Y + V +VA+
Sbjct: 214 VVGGYEDLPG--LEGFGGRLFAVIWTTTPWTLPANRAIAVHEDLAYHIVKVGADAFLVAE 271
Query: 240 CLVESLKWTFQTD--IEVVCDFPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGL 296
+E + F E+V G L + Y++ + K + FV+ G+GL
Sbjct: 272 NCLERIAKLFGEGAVFEIVGTVKGSQLTQLRYLNVLRGKSAEPQPFMHGSFVTDGSGSGL 331
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVLHL 352
VHCAP HG DD+L L+ I V + N G ++ +A P L+G+++L G D VL++
Sbjct: 332 VHCAPGHGFDDYLACLSLGISVSAPVDNDGLFTEEAFPDHPHRLKGISVLDGGSDAVLNI 391
Query: 353 VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ DVL NYQH YPYDWRTKKP+I++A+ QWF D IK +AL
Sbjct: 392 LGDDVLDVHNYQHKYPYDWRTKKPIIIRATAQWFADVGTIKDDAL 436
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 94/153 (61%), Gaps = 5/153 (3%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ N G ++ +A P L+G+++L G D VL+++ DVL NYQH YPYDWRTKKP+
Sbjct: 357 VDNDGLFTEEAFPDHPHRLKGISVLDGGSDAVLNILGDDVLDVHNYQHKYPYDWRTKKPI 416
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D IK +AL V FVPE+ K L I R WCISRQR WGVPIP
Sbjct: 417 IIRATAQWFADVGTIKDDALGATGQVQFVPENGKNRLEAFIKGRSEWCISRQRAWGVPIP 476
Query: 1225 VFYD-GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
Y+ +++E I H ++I E G D WW+
Sbjct: 477 ALYEPTGNAVMSEEVIDHIISVIQERGTDAWWT 509
>gi|169785575|ref|XP_001827248.1| isoleucyl-tRNA synthetase [Aspergillus oryzae RIB40]
gi|83775996|dbj|BAE66115.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866160|gb|EIT75432.1| Isoleucyl-tRNA synthetase [Aspergillus oryzae 3.042]
Length = 1006
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/651 (36%), Positives = 338/651 (51%), Gaps = 70/651 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L +P+HL + DL A+IWTTTPW+LPAN
Sbjct: 201 GTALAEAELEYKDDHVSTAALVKFPLLSIPSHLAQNPLLQVKDLTAVIWTTTPWTLPANA 260
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA +P LEY+ V S +++VA+ ++ L+ + D+ V+ G L D T P+
Sbjct: 261 VIAVHPDLEYTIVQSDTHGHLLVAQSRLQYLEHILKEDLSVIIPSVLGSELADRTTYRPL 320
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K + ++ A FV++ G+GLVHCAP HG +D+ L+ I + + G+++
Sbjct: 321 FKGADAEPQPIIAADFVTADSGSGLVHCAPGHGMEDYEACLSRGITAFAPVDDHGRFTDK 380
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++L +G +L +E +L Y+H YPYDWR+K+P+I++A++QW
Sbjct: 381 AMPSDPTRLSGKSVLDEGNATILEYLESQGHLLSKHRYEHKYPYDWRSKRPIIIRATEQW 440
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DG 699
F D I+ A+ LE++ FVP S ++ L + + R WCISRQR WGVPIP Y G
Sbjct: 441 FADVGDIRESAVKALEDIRFVPASGRQRLENFVKNRSEWCISRQRAWGVPIPALYHRVTG 500
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--------------NVTKS 745
+ ++ + ++ H ++IDE G D WW T D N +
Sbjct: 501 EAVLTKD-SVSHIMSVIDERGIDAWW---------TDDANDPAWIPASLQEASGPGYRRG 550
Query: 746 NDILDIWFDSGISWSHV---LKDK-PAHVYMEGMDQINGWFMSSLLTSVA-------LKH 794
D +D+WFDSG SW+ + +D PA VY EG DQ GWF S LLT A
Sbjct: 551 TDTMDVWFDSGTSWAEIDEPYRDGYPADVYSEGTDQHRGWFQSGLLTFTAHQLAAGQTAT 610
Query: 795 TAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQG 854
APFRN+ HGF +DE+G KMSKS+GNV+ I G LP + G Q
Sbjct: 611 RAPFRNLITHGFTLDEEGRKMSKSIGNVLLPQTIMDGT-LLPPLKPRKGKK------KQT 663
Query: 855 AKKLPAY---GVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLH 909
+ P Y G D LR WV AS D T V IGK +L + + K R + + LLG L
Sbjct: 664 ENQGPVYDALGPDALRMWV---ASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALS 720
Query: 910 N---HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYF 966
+ ++ + + D LK L E + F++ +A L + E SAFY
Sbjct: 721 DFRLDNQVPYNQLQQADRIALKHLSEMILSCQKACENFEFYKAVNALNRWANLEFSAFYM 780
Query: 967 TLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+KDRLY N +R + TL +I+ L +API P L EE + H P
Sbjct: 781 EAIKDRLYTYGENSASRRAAQTTLFHIYRHLQEALAPITPMLVEETWEHTP 831
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 181/412 (43%), Positives = 250/412 (60%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQR F+LHDGPPYANG HIGHA+NKILKD+ R L GKRV YVPGW
Sbjct: 42 ELYAWQRRERPADKPFVLHDGPPYANGELHIGHALNKILKDLICRVQLGLGKRVRYVPGW 101
Query: 66 DCHGLPIELKAITSKDKL------LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ ++ L +S IRK+A+ A T+ Q F S+ V+ DWE
Sbjct: 102 DCHGLPIELKALEAQKGLKDAGGSVSAAVIRKEARALARRTVKEQMKGFRSFAVMGDWE- 160
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N + T DKE+ K QL F + + IYR KPVYWSPS+ TALAE+ELEYK DHVS +
Sbjct: 161 NHWKTMDKEFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAEAELEYKDDHVSTAA 220
Query: 180 YLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGAN 234
+K L +P+HL + DL A+IWTTTPW+LPAN IA +P LEY+ V S +
Sbjct: 221 LVKFPLLSIPSHLAQNPLLQVKDLTAVIWTTTPWTLPANAVIAVHPDLEYTIVQSDTHGH 280
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
++VA+ ++ L+ + D+ V+ G L D T P+ K + ++ A FV++
Sbjct: 281 LLVAQSRLQYLEHILKEDLSVIIPSVLGSELADRTTYRPLFKGADAEPQPIIAADFVTAD 340
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKD 347
G+GLVHCAP HG +D+ L+ I + + G+++ A P L G ++L +G
Sbjct: 341 SGSGLVHCAPGHGMEDYEACLSRGITAFAPVDDHGRFTDKAMPSDPTRLSGKSVLDEGNA 400
Query: 348 QVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E +L Y+H YPYDWR+K+P+I++A++QWF D I+ A+
Sbjct: 401 TILEYLESQGHLLSKHRYEHKYPYDWRSKRPIIIRATEQWFADVGDIRESAV 452
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + G+++ A P L G ++L EG +L +E +L Y+H YPYDWR+K+
Sbjct: 371 VDDHGRFTDKAMPSDPTRLSGKSVLDEGNATILEYLESQGHLLSKHRYEHKYPYDWRSKR 430
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ A+ LE + FVP S ++ L + + R WCISRQR WGVP
Sbjct: 431 PIIIRATEQWFADVGDIRESAVKALEDIRFVPASGRQRLENFVKNRSEWCISRQRAWGVP 490
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ ++ + ++ H ++IDE G D WW+
Sbjct: 491 IPALYHRVTGEAVLTKD-SVSHIMSVIDERGIDAWWT 526
>gi|238506599|ref|XP_002384501.1| isoleucyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
gi|220689214|gb|EED45565.1| isoleucyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
Length = 1006
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/651 (36%), Positives = 338/651 (51%), Gaps = 70/651 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L +P+HL + DL A+IWTTTPW+LPAN
Sbjct: 201 GTALAEAELEYKDDHVSTAALVKFPLLSIPSHLAQNPLLQVKDLTAVIWTTTPWTLPANA 260
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPI 530
IA +P LEY+ V S +++VA+ ++ L+ + D+ V+ G L D T P+
Sbjct: 261 VIAVHPDLEYTIVQSDTHGHLLVAQSRLQYLEHILKEDLSVIIPSVLGSELADRTTYRPL 320
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
K + ++ A FV++ G+GLVHCAP HG +D+ L+ I + + G+++
Sbjct: 321 FKGADAEPQPIIAADFVTADSGSGLVHCAPGHGMEDYEACLSRGITAFAPVDDHGRFTDK 380
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQW 642
A P L G ++L +G +L +E +L Y+H YPYDWR+K+P+I++A++QW
Sbjct: 381 AMPSDPTRLSGKSVLDEGNATILEYLESQGHLLSKHRYEHKYPYDWRSKRPIIIRATEQW 440
Query: 643 FIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DG 699
F D I+ A+ LE++ FVP S ++ L + + R WCISRQR WGVPIP Y G
Sbjct: 441 FADVGDIRESAVKALEDIRFVPASGRQRLENFVKNRSEWCISRQRAWGVPIPALYHRVTG 500
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS--------------NVTKS 745
+ ++ + ++ H ++IDE G D WW T D N +
Sbjct: 501 EAVLTKD-SVSHIMSVIDERGIDAWW---------TDDANDPAWIPASLQEASGPGYRRG 550
Query: 746 NDILDIWFDSGISWSHV---LKDK-PAHVYMEGMDQINGWFMSSLLTSVA-------LKH 794
D +D+WFDSG SW+ + +D PA VY EG DQ GWF S LLT A
Sbjct: 551 TDTMDVWFDSGTSWAEIDEPYRDGYPADVYSEGTDQHRGWFQSGLLTFTAHQLAAGQTAT 610
Query: 795 TAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQG 854
APFRN+ HGF +DE+G KMSKS+GNV+ I G LP + G Q
Sbjct: 611 RAPFRNLITHGFTLDEEGRKMSKSIGNVLLPQTIMDGT-LLPPLKPRKGKK------KQT 663
Query: 855 AKKLPAY---GVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLH 909
+ P Y G D LR WV AS D T V IGK +L + + K R + + LLG L
Sbjct: 664 ENQGPVYDALGPDALRMWV---ASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALS 720
Query: 910 N---HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYF 966
+ ++ + + D LK L E + F++ +A L + E SAFY
Sbjct: 721 DFRLDNQVPYNQLQQADRIALKHLSEMILSCQKACENFEFYKAVNALNRWANLEFSAFYM 780
Query: 967 TLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+KDRLY N +R + TL +I+ L +API P L EE + H P
Sbjct: 781 EAIKDRLYTYGENSASRRAAQTTLFHIYRHLQEALAPITPMLVEETWEHTP 831
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 181/412 (43%), Positives = 250/412 (60%), Gaps = 21/412 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY+WQR F+LHDGPPYANG HIGHA+NKILKD+ R L GKRV YVPGW
Sbjct: 42 ELYAWQRRERPADKPFVLHDGPPYANGELHIGHALNKILKDLICRVQLGLGKRVRYVPGW 101
Query: 66 DCHGLPIELKAITSKDKL------LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELKA+ ++ L +S IRK+A+ A T+ Q F S+ V+ DWE
Sbjct: 102 DCHGLPIELKALEAQKGLQDAGGSVSAAVIRKEARALARRTVKEQMKGFRSFAVMGDWE- 160
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N + T DKE+ K QL F + + IYR KPVYWSPS+ TALAE+ELEYK DHVS +
Sbjct: 161 NHWKTMDKEFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAEAELEYKDDHVSTAA 220
Query: 180 YLKIKLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGAN 234
+K L +P+HL + DL A+IWTTTPW+LPAN IA +P LEY+ V S +
Sbjct: 221 LVKFPLLSIPSHLAQNPLLQVKDLTAVIWTTTPWTLPANAVIAVHPDLEYTIVQSDTHGH 280
Query: 235 VIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSS 291
++VA+ ++ L+ + D+ V+ G L D T P+ K + ++ A FV++
Sbjct: 281 LLVAQSRLQYLEHILKEDLSVIIPSVLGSELADRTTYRPLFKGADAEPQPIIAADFVTAD 340
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKD 347
G+GLVHCAP HG +D+ L+ I + + G+++ A P L G ++L +G
Sbjct: 341 SGSGLVHCAPGHGMEDYEACLSRGITAFAPVDDHGRFTDKAMPSDPTRLSGKSVLDEGNA 400
Query: 348 QVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E +L Y+H YPYDWR+K+P+I++A++QWF D I+ A+
Sbjct: 401 TILEYLESQGHLLSKHRYEHKYPYDWRSKRPIIIRATEQWFADVGDIRESAV 452
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ + G+++ A P L G ++L EG +L +E +L Y+H YPYDWR+K+
Sbjct: 371 VDDHGRFTDKAMPSDPTRLSGKSVLDEGNATILEYLESQGHLLSKHRYEHKYPYDWRSKR 430
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I++A++QWF D I+ A+ LE + FVP S ++ L + + R WCISRQR WGVP
Sbjct: 431 PIIIRATEQWFADVGDIRESAVKALEDIRFVPASGRQRLENFVKNRSEWCISRQRAWGVP 490
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ ++ + ++ H ++IDE G D WW+
Sbjct: 491 IPALYHRVTGEAVLTKD-SVSHIMSVIDERGIDAWWT 526
>gi|26335861|dbj|BAC31631.1| unnamed protein product [Mus musculus]
Length = 560
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/418 (47%), Positives = 275/418 (65%), Gaps = 14/418 (3%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFS+LYS QRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G +VH
Sbjct: 90 KCGFSQLYSCQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMRGSKVH 148
Query: 61 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+VPGWDCHGLPIE K ++ + LS ++IR+KA++FA I QK+ F WGV+ADW
Sbjct: 149 FVPGWDCHGLPIETKVLSELGVDAQSLSAMEIREKARSFAQAAIEKQKSAFVRWGVMADW 208
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+NCY+TFD +Y QL FY +Y++ +YR KPVYWSPSSRTALAE+ELEY P+HVS+
Sbjct: 209 -NNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEAELEYNPEHVSR 267
Query: 178 SIYLKIKLNQVPAH---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV--ASVKG 232
SIY++ L + P L + ++ + L+WTT PW++PANQ I + P +Y+V S G
Sbjct: 268 SIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAICYMPEAKYAVVKCSASG 327
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
I+A+ + + +T +VV F G L+ T HP+ ++ LLPA V+ +K
Sbjct: 328 HLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVS-PLLPATHVTMAK 386
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTGLVH APAHG +D+ +A +P+ L+ G ++ AGP L+ +L +G D V+ +
Sbjct: 387 GTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKM 446
Query: 353 VEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVGNILG 407
++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK A KTV I G
Sbjct: 447 LQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIPG 504
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/287 (43%), Positives = 182/287 (63%), Gaps = 8/287 (2%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P+H+S+SIY++ L + P L + ++ + L+WTT PW++PANQ I
Sbjct: 251 TALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSPVSVLVWTTQPWTIPANQAI 310
Query: 475 AFNPALEYSV--ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y+V S G I+A+ + + +T DVV F G L+ T HP+
Sbjct: 311 CYMPEAKYAVVKCSASGHLYILAEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTP 370
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A +P+ L+ G ++ AGP
Sbjct: 371 DKVS-PLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPE 429
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L+ +L +G D V+ +++ +VL EN HSYP DWRTK PV+++AS+QWF++ IK
Sbjct: 430 LQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIK 489
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY 697
A L+ V F+P +A ++ D + +RPYWCISRQRVWGVPIPVF+
Sbjct: 490 AAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPVFH 536
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G ++ AGP L+ +L EG D V+ +++ +VL EN HSYP DWRTK PV+
Sbjct: 415 LVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTPVL 474
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ IK A L+ V F+P +A S+ D + +RPYWCISRQRVWGVPIPV
Sbjct: 475 IRASKQWFVNITDIKAAAKESLKTVKFIPGAALNSMTDMLDRRPYWCISRQRVWGVPIPV 534
Query: 1226 FY 1227
F+
Sbjct: 535 FH 536
>gi|296424632|ref|XP_002841851.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638101|emb|CAZ86042.1| unnamed protein product [Tuber melanosporum]
Length = 956
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/641 (36%), Positives = 343/641 (53%), Gaps = 72/641 (11%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD---LHALIWTTTPWSLPANQF 473
GTALAE+ELEY H+S++ ++ + + L D + A +WTTTPW++PAN+
Sbjct: 179 GTALAEAELEYNEKHVSRAAFVAFPIRPTASPGLGTRLDGISVRAAVWTTTPWTIPANKA 238
Query: 474 IAFNPALEYSVASVKG-ANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPIN 531
IA N +EY V + ++VA V L V+ D GQ L Y+HP+
Sbjct: 239 IAINAEIEYCVVDTENHGKLLVASGRVGELGKGINEQPKVIIDGILGQNLVGAQYLHPLL 298
Query: 532 KEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+E L+ +LP FV++ GTGLVHCAP HG DD+LL I + + N G+++ DA
Sbjct: 299 REDAQLQPILPGDFVTADSGTGLVHCAPGHGMDDYLLCRKHDIEPFSPVDNDGRFTEDAL 358
Query: 591 PG--LEGLNILGDGKDQVLH-LVEPDVLWT--ENYQHSYPYDWRTKKPVILKASQQWFID 645
PG LEG+ +L G ++L L+E L + H YPYDWRTK+PVI++A+ QWF D
Sbjct: 359 PGYGLEGMEVLFGGTKKILQILMESKALLALQPRFTHKYPYDWRTKRPVIVRATAQWFAD 418
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
+ IK + L+ V FVP S + L + R WCISRQR WGVPIPV YD DT +
Sbjct: 419 VDVIKDVCVDSLKNVVFVPSSGRSRLTSYVNSRSEWCISRQRAWGVPIPVLYDIDTNEPL 478
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSD----VNSNVTKSNDILDIWFDSGISW 759
+ +++H +++E G D WW V + + + + +D+WFDSG SW
Sbjct: 479 LTGESVEHIIGILEEKGTDAWWGSGVPEEAWVPEPIRMTGKRYARGKETMDVWFDSGTSW 538
Query: 760 SHVLKD-------KP-AHVYMEGMDQINGWFMSSLLTSVAL-----KHTAPFRNVFLHGF 806
+ +L+ KP A +Y+EG DQ GWF SSLLTSVA PF V HGF
Sbjct: 539 A-ILRSRIGQREGKPLADLYLEGSDQHRGWFQSSLLTSVATTTGLSAAKTPFAMVVTHGF 597
Query: 807 VVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVL 866
+DEKG KMSKS+GN ++ D+ Q KS+G G+D L
Sbjct: 598 CLDEKGKKMSKSLGNTMAPVDVIQ------PKGKSIG------------------GIDAL 633
Query: 867 RWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV- 924
R WVA+ +KD V IG IL+ ++++K+R +LR+LLG N + G Y D+
Sbjct: 634 RLWVASCDYTKD--VSIGSTILDGVNENLRKLRVTLRFLLG---NLEDWDGKEVDYFDLT 688
Query: 925 ----YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSING 980
Y L +L + + Y + R ++++++ +LSAFY + KD +Y D +
Sbjct: 689 KTDKYALAQLYQVNRAIAETYKNMHFNRVIQIIMSYTNTDLSAFYLDVTKDSMYSDPKDS 748
Query: 981 EARLSGLHTLHNIFHVL---LRTVAPIMPHLAEEVYSHLPS 1018
+ R G+ T+ I+H+L L + PI+P L +EV+SH S
Sbjct: 749 QRR-RGIQTV--IYHILRNYLSILTPIVPLLTQEVWSHATS 786
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 184/404 (45%), Positives = 248/404 (61%), Gaps = 17/404 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY WQR L + F+LHDGPPYANGT H+GHA+NKILKDI R +L G+ + Y+PGW
Sbjct: 21 ELYEWQRANLPKQNLFVLHDGPPYANGTLHLGHALNKILKDIVGRFQVLSGRHLSYIPGW 80
Query: 66 DCHGLPIELKAITS-----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
DCHGLPIELKA+ S K K + +IR A+ A +TI Q AEF SWGV+ DW+ N
Sbjct: 81 DCHGLPIELKALQSHTESLKGKAMDAAEIRSLARELAEKTITEQMAEFRSWGVMGDWD-N 139
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
+ T DK+Y +QL F + K+ +YR KPV+WSPSS TALAE+ELEY HVS++ +
Sbjct: 140 HWRTMDKDYEISQLRVFKEMLKRGLLYRRFKPVFWSPSSGTALAEAELEYNEKHVSRAAF 199
Query: 181 LKIKLNQVPAHLLEGATD---LHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-ANVI 236
+ + + L D + A +WTTTPW++PAN+ IA N +EY V + ++
Sbjct: 200 VAFPIRPTASPGLGTRLDGISVRAAVWTTTPWTIPANKAIAINAEIEYCVVDTENHGKLL 259
Query: 237 VAKCLVESLKWTFQTDIEVVCD-FPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGT 294
VA V L +V+ D GQ L Y+HP+ +E L+ +LP FV++ GT
Sbjct: 260 VASGRVGELGKGINEQPKVIIDGILGQNLVGAQYLHPLLREDAQLQPILPGDFVTADSGT 319
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP--GLEGLNILGDGKDQVLH- 351
GLVHCAP HG DD+LL I + + N G+++ DA P GLEG+ +L G ++L
Sbjct: 320 GLVHCAPGHGMDDYLLCRKHDIEPFSPVDNDGRFTEDALPGYGLEGMEVLFGGTKKILQI 379
Query: 352 LVEPDVLWT--ENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 393
L+E L + H YPYDWRTK+PVI++A+ QWF D + IK
Sbjct: 380 LMESKALLALQPRFTHKYPYDWRTKRPVIVRATAQWFADVDVIK 423
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 7/160 (4%)
Query: 1109 ITNQGKYSPDAGPG--LEGLNILGEGKDQVLH-LVEPDVLWT--ENYQHSYPYDWRTKKP 1163
+ N G+++ DA PG LEG+ +L G ++L L+E L + H YPYDWRTK+P
Sbjct: 347 VDNDGRFTEDALPGYGLEGMEVLFGGTKKILQILMESKALLALQPRFTHKYPYDWRTKRP 406
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI++A+ QWF D + IK + L+ V FVP S + L + R WCISRQR WGVPI
Sbjct: 407 VIVRATAQWFADVDVIKDVCVDSLKNVVFVPSSGRSRLTSYVNSRSEWCISRQRAWGVPI 466
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQ 1261
PV YD DT ++ +++H +++E G D WW V +
Sbjct: 467 PVLYDIDTNEPLLTGESVEHIIGILEEKGTDAWWGSGVPE 506
>gi|302507938|ref|XP_003015930.1| hypothetical protein ARB_06242 [Arthroderma benhamiae CBS 112371]
gi|291179498|gb|EFE35285.1| hypothetical protein ARB_06242 [Arthroderma benhamiae CBS 112371]
Length = 1012
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 234/644 (36%), Positives = 342/644 (53%), Gaps = 54/644 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DHIS + +K L+ +P+ +LE D+ A+IWTTTPW+LPAN
Sbjct: 203 GTALAEAELEYKEDHISTAALVKFVLDNLPSQILEHPLLAGNDISAVIWTTTPWTLPANA 262
Query: 473 FIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITY-IHP 529
+A NP EY++ S + ++VA+ ++ L+ + D VV G L + TY H
Sbjct: 263 ALAVNPDFEYTIVDSTRHGKLLVAQSRLQYLQELLEDDFTVVIPAIMGSELLNSTYRSHF 322
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
E +++ A FV++ G+G+VHCAP HG +D+ LA IP + +G+++ A
Sbjct: 323 KGPESEKQRIIAAEFVTADAGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSA 382
Query: 590 GPG----LEGLNILGDGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWF 643
P L G +LGDG V+ HL E +L +Y+H YPYDWR+K PVI++A++QWF
Sbjct: 383 MPTKPDLLTGKEVLGDGNHAVIKHLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWF 442
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGD 700
D I+ EA+ L+ V F+P S K L + R WCISRQR WGVPIP Y G+
Sbjct: 443 ADVGDIRGEAIQALQSVQFIPPSGKSRLETFVRNRSEWCISRQRAWGVPIPALYHRTTGE 502
Query: 701 TIIVNEANIKHFCTLIDEHGPDFWWSLSV--EQLLNTSDVNSN---VTKSNDILDIWFDS 755
I+ E+ + H +I+E G D WW+ + L S +S+ + D +D+WFDS
Sbjct: 503 AILTKES-VSHIMKMIEERGIDAWWTDDEFDQAWLPASLRDSSSPQYKRGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALK--------HTAPFRNVFL 803
G SW+ + D PA VY+EG DQ GWF SSLLT ++ + APF+ +
Sbjct: 562 GTSWAQLKDDSPESPPADVYLEGSDQHRGWFQSSLLTYISHQLAEGGKSSFKAPFKTLIT 621
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY-- 861
HGF +D+ G KMSKS+GN I +I G P K + + +P Y
Sbjct: 622 HGFTLDQYGRKMSKSIGNTIQPDEIMGGTLLPPLKPKKIKGKGPKPN-----PDVPVYDA 676
Query: 862 -GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS-------E 913
G D LR W AA + V IG+ +L + + K R + + LLG L + E
Sbjct: 677 LGPDALRLW-AAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYE 735
Query: 914 STGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
S +I + V + + Q +D + ++ +A + + E SAFY +KDRL
Sbjct: 736 SLHAIDKIALVQLHNLVKSSQEAVDKM----EFFKAVTAMNKWANLEFSAFYIEAIKDRL 791
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
Y DS +G +R + TL +I+ + + PI+P L EE + H P
Sbjct: 792 YADSESGMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP 835
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/413 (44%), Positives = 252/413 (61%), Gaps = 22/413 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LYSWQ+ F LHDGPPYANG HIGHA+NKILKDI R L +GKRVHYVPGW
Sbjct: 42 DLYSWQQRNRPATATFTLHDGPPYANGDLHIGHALNKILKDIICRVQLAKGKRVHYVPGW 101
Query: 66 DCHGLPIELKAITSKDKLL--------SPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ + +L IR A+ A +T++ Q F +W ++ DW
Sbjct: 102 DCHGLPIELKALQGQKELGDLRSAGRDGAAQIRSAARQLAEKTVSQQMEGFRNWAIMGDW 161
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E N Y T +K++ + QL F + ++ IYR KPVYWSPSS TALAE+ELEYK DH+S
Sbjct: 162 E-NAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSGTALAEAELEYKEDHIST 220
Query: 178 SIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKG 232
+ +K L+ +P+ +LE D+ A+IWTTTPW+LPAN +A NP EY++ S +
Sbjct: 221 AALVKFVLDNLPSQILEHPLLAGNDISAVIWTTTPWTLPANAALAVNPDFEYTIVDSTRH 280
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITY-IHPINKEQRDLKLLPAGFVSS 290
++VA+ ++ L+ + D VV G L + TY H E +++ A FV++
Sbjct: 281 GKLLVAQSRLQYLQELLEDDFTVVIPAIMGSELLNSTYRSHFKGPESEKQRIIAAEFVTA 340
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGK 346
G+G+VHCAP HG +D+ LA IP + +G+++ A P L G +LGDG
Sbjct: 341 DAGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGN 400
Query: 347 DQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ HL E +L +Y+H YPYDWR+K PVI++A++QWF D I+ EA+
Sbjct: 401 HAVIKHLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAI 453
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKK 1162
+ +G+++ A P L G +LG+G V+ HL E +L +Y+H YPYDWR+K
Sbjct: 372 VDGEGRFTQSAMPTKPDLLTGKEVLGDGNHAVIKHLSETGILIHKHDYKHKYPYDWRSKL 431
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ EA+ L+ V F+P S K L + R WCISRQR WGVP
Sbjct: 432 PVIIRATEQWFADVGDIRGEAIQALQSVQFIPPSGKSRLETFVRNRSEWCISRQRAWGVP 491
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ I+ E+ + H +I+E G D WW+
Sbjct: 492 IPALYHRTTGEAILTKES-VSHIMKMIEERGIDAWWT 527
>gi|406607562|emb|CCH41033.1| isoleucine-trna synthetase [Wickerhamomyces ciferrii]
Length = 974
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 347/641 (54%), Gaps = 71/641 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE-----GATDLHALIWTTTPWSLPANQ 472
TALAE ELEY H S + YL L + L + G ++HALIWT+TPW++ +N+
Sbjct: 214 TALAEGELEYNDQHRSVAAYLNFPLLETTPELQKIIDENGLQNVHALIWTSTPWTIASNK 273
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVEN---LKWTFQ-TDIDVVCDFPGQYLQDITYI 527
I+ N LEY+ V + +I+A L N +K + TDI FPG L + Y+
Sbjct: 274 AISINENLEYTFVQTDDSKTLIIADSLSSNILGMKLGMKPTDIK----FPGSILSNSKYL 329
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
HPI+ E ++ V S GTGLVH AP HG +D+ L I + + GKY+
Sbjct: 330 HPISNETN--PIIHGDHVIDSAGTGLVHTAPGHGNEDYFACLKHGIEAFSPVDQFGKYTN 387
Query: 588 DAGPGLE---GLNILGDGKDQVLHLV-EPDVLWT--ENYQHSYPYDWRTKKPVILKASQQ 641
+ G E G +LG+G + +L + D++++ ++Y HSYPYDWR+KKP+I++A+ Q
Sbjct: 388 ELPKGFETLIGKRVLGEGGKLIWNLFYDKDMVFSKQDDYIHSYPYDWRSKKPIIIRATPQ 447
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---D 698
WF + +IK +A L++V FVPE+ K L I R WCISRQR WGVPIP Y +
Sbjct: 448 WFANVGKIKDDAKDSLDDVKFVPENGKNRLSAFINNRNEWCISRQRSWGVPIPALYSKSN 507
Query: 699 GDTIIVNEANIKHFCTLIDEHGPDFWW--SLSVEQLLNTS--DVNSNVTKSNDILDIWFD 754
+ +++++ I H IDE G D W+ +V + L S D K D +D+WFD
Sbjct: 508 ENVVLLDDVTITHIINKIDELGTDAWFEEESNVSRWLPDSMKDKGDEYYKGKDTMDVWFD 567
Query: 755 SGISWSHVL---------KDKPAHVYMEGMDQINGWFMSSLLTSVALKHT----APFRNV 801
SG SW+ + +D A VY+EG DQ GWF SSLLT +A + AP++ +
Sbjct: 568 SGSSWTEIQDFLQKNGIERDTLADVYLEGSDQHRGWFQSSLLTKIATSDSSRPNAPYKQI 627
Query: 802 FLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY 861
HGF +DEKG KMSKS+GN IS HD+ +G GN KLPA
Sbjct: 628 VTHGFTLDEKGQKMSKSIGNTISPHDVIKG-----------GN------------KLPAS 664
Query: 862 GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS-- 919
GVD LR WV A + V +G IL +++IR++ ++LG L + E + S++
Sbjct: 665 GVDGLRLWV-AQSDYTGDVLVGPTILKHVGVQLKRIRNAFTFMLGNLKDF-EKSDSVNYK 722
Query: 920 --RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDS 977
+ +D Y L +L + + ++ Y + + R ++ + + + EL+A YF ++KDRLY D
Sbjct: 723 DLKKIDKYALSKLYDLEKEVNQHYKDLNFNRVTQTIYHHMKTELNAKYFDIIKDRLYADD 782
Query: 978 INGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
NG +R S + I L ++P+ P L ++V+ + P+
Sbjct: 783 PNGISRRSAQTVISQILQTYLSILSPLSPVLTQQVWDYSPN 823
Score = 295 bits (756), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 171/413 (41%), Positives = 248/413 (60%), Gaps = 35/413 (8%)
Query: 12 REALNGKPE----FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
++ LN KP FILHDGPPYANG HIGHA+NKILKD R NL+QGK+++Y PGWDC
Sbjct: 54 KDQLNKKPVDKDVFILHDGPPYANGDIHIGHAMNKILKDFINRYNLIQGKQIYYKPGWDC 113
Query: 68 HGLPIELKAI------TSKD--KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
HGLPIELKA+ T KD LS ++RK A++ A +TI++Q F+ + +L D++H
Sbjct: 114 HGLPIELKALETIAKKTKKDPSMTLSVQEVRKIARDHATKTISSQLESFKEFAILTDFQH 173
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N Y T + + NQL F + +++ I R KPV+W + TALAE ELEY H S +
Sbjct: 174 N-YKTLNHNFEINQLKIFQKMLEKNLITRQKKPVFWGCETHTALAEGELEYNDQHRSVAA 232
Query: 180 YLKIKLNQVPAHLLE-----GATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGA 233
YL L + L + G ++HALIWT+TPW++ +N+ I+ N LEY+ V +
Sbjct: 233 YLNFPLLETTPELQKIIDENGLQNVHALIWTSTPWTIASNKAISINENLEYTFVQTDDSK 292
Query: 234 NVIVAKCL---VESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 289
+I+A L + +K + TDI+ FPG L + Y+HPI+ E ++ V
Sbjct: 293 TLIIADSLSSNILGMKLGMKPTDIK----FPGSILSNSKYLHPISNETN--PIIHGDHVI 346
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE---GLNILGDGK 346
S GTGLVH AP HG +D+ L I + + GKY+ + G E G +LG+G
Sbjct: 347 DSAGTGLVHTAPGHGNEDYFACLKHGIEAFSPVDQFGKYTNELPKGFETLIGKRVLGEGG 406
Query: 347 DQVLHLV-EPDVLWT--ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+ +L + D++++ ++Y HSYPYDWR+KKP+I++A+ QWF + +IK +A
Sbjct: 407 KLIWNLFYDKDMVFSKQDDYIHSYPYDWRSKKPIIIRATPQWFANVGKIKDDA 459
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 26/234 (11%)
Query: 1033 LQYSGSIAKRILYCDSINGEAR--LSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1090
+++ GSI Y I+ E + G H + + L+ T AP H E+ ++ L
Sbjct: 316 IKFPGSILSNSKYLHPISNETNPIIHGDHVIDSAGTGLVHT-AP--GHGNEDYFACLKHG 372
Query: 1091 QGTFSSFCHFKVYHHLNLITNQGKYSPDAGPGLE---GLNILGEGKDQVLHLV-EPDVLW 1146
FS F GKY+ + G E G +LGEG + +L + D+++
Sbjct: 373 IEAFSPVDQF------------GKYTNELPKGFETLIGKRVLGEGGKLIWNLFYDKDMVF 420
Query: 1147 T--ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQ 1204
+ ++Y HSYPYDWR+KKP+I++A+ QWF + +IK +A L+ V FVPE+ K L
Sbjct: 421 SKQDDYIHSYPYDWRSKKPIIIRATPQWFANVGKIKDDAKDSLDDVKFVPENGKNRLSAF 480
Query: 1205 IAQRPYWCISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWW 1255
I R WCISRQR WGVPIP Y + + +++++ I H IDE G D W+
Sbjct: 481 INNRNEWCISRQRSWGVPIPALYSKSNENVVLLDDVTITHIINKIDELGTDAWF 534
>gi|327298613|ref|XP_003234000.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326464178|gb|EGD89631.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 1012
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 232/643 (36%), Positives = 343/643 (53%), Gaps = 52/643 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DHIS + +K L+ +P+ +LE +D+ A+IWTTTPW+LPAN
Sbjct: 203 GTALAEAELEYKEDHISTAALVKFVLDNLPSQILEHPLLAGSDISAVIWTTTPWTLPANA 262
Query: 473 FIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITY-IHP 529
+A NP EY++ S + ++VA+ ++ L+ + D VV G L + TY H
Sbjct: 263 ALAVNPDFEYTIVDSTRHGKLLVAQSRLQYLQELLEDDFTVVIPAIMGSELLNSTYRSHF 322
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
E +++ A FV++ G+G+VHCAP HG +D+ LA IP + +G+++ A
Sbjct: 323 KGPESEKQRIIAADFVTADAGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSA 382
Query: 590 GPG----LEGLNILGDGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWF 643
P L G +LGDG V+ +L E +L +Y+H YPYDWR+K PVI++A++QWF
Sbjct: 383 MPTKPDLLTGKEVLGDGNHAVIKYLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWF 442
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
D I+ EA+ L+ V F+P S K L + R WCISRQR WGVPIP Y T
Sbjct: 443 ADVGDIRGEAIQALQSVQFIPPSGKSRLETFVRNRSEWCISRQRAWGVPIPALYHRTTGE 502
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSV--EQLLNTSDVNSN---VTKSNDILDIWFDSG 756
I+++ ++ H +I+E G D WW+ + L S +S+ + D +D+WFDSG
Sbjct: 503 AILSKESVSHIMKMIEERGIDAWWTDDEFDQAWLPASLRDSSPPQYKRGTDTMDVWFDSG 562
Query: 757 ISWSHVLKD----KPAHVYMEGMDQINGWFMSSLLTSVALK--------HTAPFRNVFLH 804
SW+ + D PA VY+EG DQ GWF SSLLT ++ + APF+ + H
Sbjct: 563 TSWAQLKDDSPENSPADVYLEGSDQHRGWFQSSLLTYISHQLAEGSKSSFKAPFKTLITH 622
Query: 805 GFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY--- 861
GF +D+ G KMSKS+GN I +I G P K + + +P Y
Sbjct: 623 GFTLDQYGRKMSKSIGNTIQPDEIMGGTLLPPLKPKKIKGKGPKPN-----PDVPVYDAL 677
Query: 862 GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS-------ES 914
G D LR W AA + V IG+ +L + + K R + + LLG L + ES
Sbjct: 678 GPDALRLW-AAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYES 736
Query: 915 TGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
+I + V + + Q +D + ++ +A + + E SAFY +KDRLY
Sbjct: 737 LHAIDKIALVQLHNLVKSSQEAVDKM----EFFKAVTAMNKWANLEFSAFYIEAIKDRLY 792
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
DS +G +R + TL +I+ + + PI+P L EE + H P
Sbjct: 793 ADSESGMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP 835
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 181/413 (43%), Positives = 253/413 (61%), Gaps = 22/413 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LYSWQ+ F LHDGPPYANG HIGHA+NKILKDI R L +GKRVHYVPGW
Sbjct: 42 DLYSWQQRNRPATATFTLHDGPPYANGELHIGHALNKILKDIICRVQLARGKRVHYVPGW 101
Query: 66 DCHGLPIELKAITSKDKLL--------SPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ + +L IR A+ A +T++ Q F +W ++ DW
Sbjct: 102 DCHGLPIELKALQGQKELGDLRSAGRDGAAQIRSAARQLAEKTVSQQMEGFRNWAIMGDW 161
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E N Y T +K++ + QL F + ++ IYR KPVYWSPSS TALAE+ELEYK DH+S
Sbjct: 162 E-NAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSGTALAEAELEYKEDHIST 220
Query: 178 SIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKG 232
+ +K L+ +P+ +LE +D+ A+IWTTTPW+LPAN +A NP EY++ S +
Sbjct: 221 AALVKFVLDNLPSQILEHPLLAGSDISAVIWTTTPWTLPANAALAVNPDFEYTIVDSTRH 280
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITY-IHPINKEQRDLKLLPAGFVSS 290
++VA+ ++ L+ + D VV G L + TY H E +++ A FV++
Sbjct: 281 GKLLVAQSRLQYLQELLEDDFTVVIPAIMGSELLNSTYRSHFKGPESEKQRIIAADFVTA 340
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGK 346
G+G+VHCAP HG +D+ LA IP + +G+++ A P L G +LGDG
Sbjct: 341 DAGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGN 400
Query: 347 DQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ +L E +L +Y+H YPYDWR+K PVI++A++QWF D I+ EA+
Sbjct: 401 HAVIKYLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAI 453
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKK 1162
+ +G+++ A P L G +LG+G V+ +L E +L +Y+H YPYDWR+K
Sbjct: 372 VDGEGRFTQSAMPTKPDLLTGKEVLGDGNHAVIKYLSETGILIHKHDYKHKYPYDWRSKL 431
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ EA+ L+ V F+P S K L + R WCISRQR WGVP
Sbjct: 432 PVIIRATEQWFADVGDIRGEAIQALQSVQFIPPSGKSRLETFVRNRSEWCISRQRAWGVP 491
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y T I+++ ++ H +I+E G D WW+
Sbjct: 492 IPALYHRTTGEAILSKESVSHIMKMIEERGIDAWWT 527
>gi|358054156|dbj|GAA99692.1| hypothetical protein E5Q_06395 [Mixia osmundae IAM 14324]
Length = 1014
Score = 378 bits (971), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/637 (35%), Positives = 338/637 (53%), Gaps = 62/637 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--------LEGATDLHALIWTTTPWSLP 469
TALAE+E+EYK DH S ++Y + ++ L ++ + L+WTTTPW+LP
Sbjct: 255 TALAEAEIEYKDDHRSTAVYARFHIDTASPALQRVLDQLPVDQSARAAVLVWTTTPWTLP 314
Query: 470 ANQFIAFNPALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVV--CDFPGQYLQDIT 525
AN +A NP + Y +A + AN +VA+ + L ++D+ + C G L T
Sbjct: 315 ANLAVAVNPDMLYVLAHDRVANETYVVAQSRLVALSEALKSDLQAIPQCMLKGSDLIGTT 374
Query: 526 YIHPINK-EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIP----VLNLIT 580
Y H + ++PA V++ GTGLVH APAHG +D L A +NL+
Sbjct: 375 YRHHLMPPSASSYPIIPASHVTADSGTGLVHTAPAHGVEDDLAYSAYHATGNGQEVNLVD 434
Query: 581 NQGKYS--------PDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRT 630
G+YS D L G +L G D V+ L++ D ++ + H YPYDWRT
Sbjct: 435 GFGRYSEALRSRIGADWAERLVGKPVLTTGNDMVIQLLQSDGTIVSASTHVHRYPYDWRT 494
Query: 631 KKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWG 690
KKP+I +A++QWFID E ++ A LE V+FVP + L+ +A R WCISRQR WG
Sbjct: 495 KKPIITRATRQWFIDLEPLQQSAFDSLERVHFVPPGGRARLQRYVAGRKGWCISRQRPWG 554
Query: 691 VPIPVF--YDGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDI 748
VPI DG T++ E I H ++ E G D WW VE L N + D
Sbjct: 555 VPILALEAADGTTMMTTE-TIDHAINVLREKGTDHWWHGPVEDFLPPVMQNQGFIQGRDT 613
Query: 749 LDIWFDSGISWSHV----LKDKP---AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNV 801
+D+W DSG++WS + L+ + + + +EG DQ GWF SSLLTS+A + AP+ V
Sbjct: 614 VDVWLDSGVTWSFLESLALRSRSEPVSDLVLEGGDQHRGWFQSSLLTSIATRQQAPYGCV 673
Query: 802 FLHGFVVDEKGAKMSKSVGNVISAHDITQGAK--KLPAYEKSVGNVISAHDITQGAKKLP 859
HGFV+DE G KMSKS+GNVIS +D+ G + K P ++
Sbjct: 674 VTHGFVLDETGRKMSKSLGNVISPNDVINGGRSAKGPVWQP------------------- 714
Query: 860 AYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS 919
+GVDVLR W+A+ ++ + IG+NI+ ++ +++R+S R++LG L +H
Sbjct: 715 -FGVDVLRLWIASVDFRE-DMQIGQNIIQLIAENYRRLRNSARFMLGNLGSHPPIAFDDV 772
Query: 920 R--YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDS 977
+ +D Y+L L E ++ Y +F + RA L F LS+FYF +VKD LYCD
Sbjct: 773 QLDLLDRYVLNELVEVDESIRLAYDDFAFNRAISTLTQFTTKTLSSFYFDIVKDSLYCDG 832
Query: 978 INGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
++ RL+ ++ L + +API+P L EE+ S
Sbjct: 833 LSDHRRLATVYVLQQVLRSYCAWLAPILPLLVEEIAS 869
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 249/425 (58%), Gaps = 36/425 (8%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY WQ + + +P F+LHDGPPYANG HIGHA+NKILKDI LR +L G RV+YV GWD
Sbjct: 96 LYRWQDQQTD-RPLFVLHDGPPYANGPLHIGHALNKILKDIVLRYKVLTGYRVNYVTGWD 154
Query: 67 CHGLPIEL---KAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
CHGLP+EL KAI +++D+ L +R +A+ A E + Q+++F+ +G++ DW +
Sbjct: 155 CHGLPLELAAHKAIGPPESNEDRQTFALRVRAQARKAAHEGVALQRSQFQQFGLMVDW-N 213
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+ Y T D +Y QL F +++ + IY+ KPV +SPSS+TALAE+E+EYK DH S ++
Sbjct: 214 DRYLTLDHDYEIRQLEIFRDMFAKGMIYQAFKPVPYSPSSQTALAEAEIEYKDDHRSTAV 273
Query: 180 YLKIKLNQVPAHL--------LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK 231
Y + ++ L ++ + L+WTTTPW+LPAN +A NP + Y +A +
Sbjct: 274 YARFHIDTASPALQRVLDQLPVDQSARAAVLVWTTTPWTLPANLAVAVNPDMLYVLAHDR 333
Query: 232 GAN--VIVAKCLVESLKWTFQTDIEVV--CDFPGQYLQDITYIHPIN-KEQRDLKLLPAG 286
AN +VA+ + +L ++D++ + C G L TY H + ++PA
Sbjct: 334 VANETYVVAQSRLVALSEALKSDLQAIPQCMLKGSDLIGTTYRHHLMPPSASSYPIIPAS 393
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIP----VLNLITNQGKYS--------PDAGP 334
V++ GTGLVH APAHG +D L A +NL+ G+YS D
Sbjct: 394 HVTADSGTGLVHTAPAHGVEDDLAYSAYHATGNGQEVNLVDGFGRYSEALRSRIGADWAE 453
Query: 335 GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 392
L G +L G D V+ L++ D ++ + H YPYDWRTKKP+I +A++QWFID E +
Sbjct: 454 RLVGKPVLTTGNDMVIQLLQSDGTIVSASTHVHRYPYDWRTKKPIITRATRQWFIDLEPL 513
Query: 393 KPEAL 397
+ A
Sbjct: 514 QQSAF 518
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 94/172 (54%), Gaps = 13/172 (7%)
Query: 1104 HHLNLITNQGKYS--------PDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHS 1153
+NL+ G+YS D L G +L G D V+ L++ D ++ + H
Sbjct: 428 QEVNLVDGFGRYSEALRSRIGADWAERLVGKPVLTTGNDMVIQLLQSDGTIVSASTHVHR 487
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YPYDWRTKKP+I +A++QWFID E ++ A LE V+FVP + L+ +A R WCI
Sbjct: 488 YPYDWRTKKPIITRATRQWFIDLEPLQQSAFDSLERVHFVPPGGRARLQRYVAGRKGWCI 547
Query: 1214 SRQRVWGVPIPVF--YDGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQR WGVPI DG T++ E I H ++ E G D WW PVE L
Sbjct: 548 SRQRPWGVPILALEAADGTTMMTTE-TIDHAINVLREKGTDHWWHGPVEDFL 598
>gi|227544867|ref|ZP_03974916.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
gi|338204195|ref|YP_004650340.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
gi|227185141|gb|EEI65212.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
gi|336449435|gb|AEI58050.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
Length = 950
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/622 (36%), Positives = 334/622 (53%), Gaps = 63/622 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ L D + ++WTTTPW++PA++ +A N
Sbjct: 210 SALAEAEVEYH-DVVAKTAFFVEQIKDGKGRL---DNDTYLVVWTTTPWTVPASEAVAVN 265
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
P +YSV VK AN +VA L+E L D +VV GQ L+ +T HP
Sbjct: 266 PKFDYSV--VKPANDDRKFVVATDLLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPY-- 321
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RDL + A +V++ GTGLVH AP +G DD+ +P+ I +QG + + G G
Sbjct: 322 LDRDLLVGLADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEG 381
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ D D L +E + +L E QHSYP+DWRTK+P+I +A+ QWF+ E+++
Sbjct: 382 FEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMR 440
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
L LE+V + PE K LR+ I R W ISRQRVWGVP+PVFY D T I+ E I
Sbjct: 441 QNILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPVFYAEDGTPIMEEETI 500
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L ++G + W+ + LL N N TK DI+D+WFDSG S VL
Sbjct: 501 NHVAELFAKYGSNVWFEREAKDLLPEGYTNEHSPNGKFTKETDIMDVWFDSGSSHQGVLA 560
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSV AP++ + GF +D++G KMSKS
Sbjct: 561 ERDYLTYPADLYLEGSDQYRGWFNSSLITSVVCSGHAPYKEIVSQGFTLDKRGNKMSKSQ 620
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDP 878
GNVI + + Q G +++R WV +A S D
Sbjct: 621 GNVIDPNKVVQ-----------------------------QMGAEIIRLWVMSADTSADV 651
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V +G + +K+R++ R+LL + + ++S + VD YML +L F
Sbjct: 652 RVSMG--TFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVKLNHFL 709
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
TM + + + A + L+NFV N+LSAFY + KD LY ++ N E R S ++I
Sbjct: 710 KTMREDFDNYDFLDAYKALINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTVFYDIL 769
Query: 995 HVLLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH EEV+S++
Sbjct: 770 LTLVKLLTPILPHTTEEVWSYM 791
Score = 285 bits (730), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 232/396 (58%), Gaps = 20/396 (5%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HGL
Sbjct: 59 RQKLNEGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGL 118
Query: 71 PIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE + S K +S + R + +AL+ ++ Q+ +F+ GV +W+H Y T DKE
Sbjct: 119 PIEHQLTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDH-PYLTLDKE 177
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++
Sbjct: 178 FEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFVEQIKDG 236
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVES 244
L D + ++WTTTPW++PA++ +A NP +YSV VK AN +VA L+E
Sbjct: 237 KGRL---DNDTYLVVWTTTPWTVPASEAVAVNPKFDYSV--VKPANDDRKFVVATDLLEK 291
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L D EVV GQ L+ +T HP RDL + A +V++ GTGLVH AP +
Sbjct: 292 LAEKLGWEDYEVVDHLMGQELEGMTTQHPY--LDRDLLVGLADYVTADAGTGLVHTAPGY 349
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
G DD+ +P+ I +QG + + G G EG+ D D L +E + +L E
Sbjct: 350 GDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQE 408
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QHSYP+DWRTK+P+I +A+ QWF+ E+++ L
Sbjct: 409 PLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNIL 444
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I +QG + + G G EG+ + D L +E + +L E QHSYP+DWRTK+P+I
Sbjct: 368 INDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIF 426
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ E+++ L LE V + PE K LR+ I R W ISRQRVWGVP+PVF
Sbjct: 427 RATDQWFVSIEKMRQNILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPVF 486
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L ++G + W+ + LL
Sbjct: 487 YAEDGTPIMEEETINHVAELFAKYGSNVWFEREAKDLL 524
Score = 44.7 bits (104), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
+IAK +LY ++ N E R S ++I L++ + PI+PH EEV+S++
Sbjct: 742 NIAKDVLYIEAENSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM 791
>gi|423332887|ref|ZP_17310669.1| isoleucyl-tRNA synthase [Lactobacillus reuteri ATCC 53608]
gi|337728005|emb|CCC03094.1| isoleucyl-tRNA synthase [Lactobacillus reuteri ATCC 53608]
Length = 931
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/622 (36%), Positives = 334/622 (53%), Gaps = 63/622 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ L D + ++WTTTPW++PA++ +A N
Sbjct: 191 SALAEAEVEYH-DVVAKTAFFVEQIKDGKGRL---DNDTYLVVWTTTPWTVPASEAVAVN 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
P +YSV VK AN +VA L+E L D +VV GQ + +T HP
Sbjct: 247 PKFDYSV--VKPANDDRKFVVATDLLEKLAEKLGWEDYEVVDHLMGQEFEGMTTQHPY-- 302
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RDL + A +V++ GTGLVH AP +G DD+ +P+ I +QG + + G G
Sbjct: 303 LDRDLLVGLADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEG 362
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ D D L +E + +L E QHSYP+DWRTK+P+I +A+ QWF+ E+++
Sbjct: 363 FEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMR 421
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
L LE+V + PE K LR+ I R W ISRQRVWGVP+P+FY D T I+ E I
Sbjct: 422 QNILNALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIMEEETI 481
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L ++G + W+ + LL N N TK DI+D+WFDSG S VL
Sbjct: 482 NHVAELFAKYGSNVWFEREAKDLLPEGYTNEHSPNGKFTKETDIMDVWFDSGSSHQGVLA 541
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSV AP++ + GF +D++G KMSKS
Sbjct: 542 ERDYLTYPADLYLEGSDQYRGWFNSSLITSVVCSGHAPYKEIVSQGFTLDKRGNKMSKSQ 601
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDP 878
GNVI + + Q G +++R WV +A S D
Sbjct: 602 GNVIDPNKVVQ-----------------------------QMGAEIIRLWVMSADTSADV 632
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V +G + +K+R++ R+LL + + ++S + VD YML +L F
Sbjct: 633 RVSMG--TFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYGKLQSVDKYMLVKLNHFL 690
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
TM + + + A +VL+NFV N+LSAFY + KD LY ++ N E R S ++I
Sbjct: 691 KTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTVFYDIL 750
Query: 995 HVLLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH EEV+S+L
Sbjct: 751 LTLVKLLTPILPHTTEEVWSYL 772
Score = 284 bits (726), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 231/396 (58%), Gaps = 20/396 (5%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HGL
Sbjct: 40 RQKLNEGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGL 99
Query: 71 PIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE + S K +S + R + +AL+ ++ Q+ +F+ GV +W+H Y T DKE
Sbjct: 100 PIEHQLTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDH-PYLTLDKE 158
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++
Sbjct: 159 FEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFVEQIKDG 217
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVES 244
L D + ++WTTTPW++PA++ +A NP +YSV VK AN +VA L+E
Sbjct: 218 KGRL---DNDTYLVVWTTTPWTVPASEAVAVNPKFDYSV--VKPANDDRKFVVATDLLEK 272
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L D EVV GQ + +T HP RDL + A +V++ GTGLVH AP +
Sbjct: 273 LAEKLGWEDYEVVDHLMGQEFEGMTTQHPY--LDRDLLVGLADYVTADAGTGLVHTAPGY 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
G DD+ +P+ I +QG + + G G EG+ D D L +E + +L E
Sbjct: 331 GDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQE 389
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QHSYP+DWRTK+P+I +A+ QWF+ E+++ L
Sbjct: 390 PLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNIL 425
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I +QG + + G G EG+ + D L +E + +L E QHSYP+DWRTK+P+I
Sbjct: 349 INDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ E+++ L LE V + PE K LR+ I R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIEKMRQNILNALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L ++G + W+ + LL
Sbjct: 468 YAEDGTPIMEEETINHVAELFAKYGSNVWFEREAKDLL 505
>gi|408400101|gb|EKJ79188.1| hypothetical protein FPSE_00663 [Fusarium pseudograminearum CS3096]
Length = 948
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/630 (37%), Positives = 327/630 (51%), Gaps = 47/630 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKI----KLNQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH+SK+ Y++ L+ +P L L+A IWTTTPW+LPAN+
Sbjct: 190 TALAEAELEYRDDHVSKAAYIRFPIVSDLSSIP-ELANFDGKLYAAIWTTTPWTLPANRA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPIN- 531
IA + + YSV V +VA VE ++ D VV D PG L+ + Y + +
Sbjct: 249 IAIHNEIYYSVIQVGSDGYLVASDRVEAMR-EMLPDFQVVVDSIPGSSLKGLEYQNRLRG 307
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
K ++ A FV++ GTGLVH AP HGQDD+ I I + G ++ +A P
Sbjct: 308 KSAPSQSIIEADFVTADSGTGLVHIAPGHGQDDYEACSKLGIEAFAPIDDGGHFTKEAYP 367
Query: 592 G-----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
+IL G VL LV DVL T +H YPYDWRTK+PV+ +A+ QWF D
Sbjct: 368 DDPEKLTSAPSILDGGSQAVLDLVNDDVLGTHKLRHKYPYDWRTKRPVVTRATAQWFADV 427
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD-GDTIIVN 705
IK +ALA L++V FVPE + L I R WCISRQR WGVPIP YD ++
Sbjct: 428 GSIKEDALAALKDVRFVPEGGRVRLESFIKGRSEWCISRQRSWGVPIPALYDESGNAVMT 487
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
I+H +++ E W+S + S++ + D +D+WFDSG SW+
Sbjct: 488 VKTIEHIISVMQERTSSAWFSDGPDDPAWIPSNLQGKYRRGTDTMDVWFDSGSSWTET-- 545
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVAL--------KHTAPFRNVFLHGFVVDEKGAKMS 816
+ A VY+EG DQ GWF SSLLT VA K +APF+ + HGF +D +G KMS
Sbjct: 546 ESRADVYLEGSDQHRGWFQSSLLTYVATQKSRETTDKISAPFKTLVTHGFTLDGQGKKMS 605
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN+I + G+ P K QG + G D +R W AA A
Sbjct: 606 KSLGNMIVPSQVMDGSLLGPVKTKG-----------QGGPQSNGLGADAVRLW-AASADF 653
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNT 936
V IG+ IL Q + K R+ ++ LLG L+ E+ S +D L +L + +
Sbjct: 654 TTDVLIGQTILQPVQTSLIKYRTIIKMLLGSLNQ--EARQSPLTKLDQIALVQLSDTMSQ 711
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +F++ RA ++ +V +LSAFY +KDRLYC G L IF
Sbjct: 712 VMESYNDFEFYRAVSMINRWVAADLSAFYLEGLKDRLYCGDGGG--------VLEPIFIG 763
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
LR +API P L EE +SH P+ SS
Sbjct: 764 FLRMLAPITPMLVEEAWSHRPTWMAEDSSL 793
Score = 332 bits (852), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 181/406 (44%), Positives = 245/406 (60%), Gaps = 15/406 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ E + F LHDGPPYANG H+GHA+NK+LKD+T+R + QG++V Y PGW
Sbjct: 35 DLYVWQGENRPEEKSFTLHDGPPYANGNLHVGHAMNKVLKDMTVRVKVQQGQKVTYRPGW 94
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE+KA+ +S K L+P+ IR A+ A +T+ Q F++ V++DWE + T
Sbjct: 95 DCHGLPIEMKALGSSATKGLTPVQIRDTARRLASKTVKDQMKGFQALAVMSDWEKR-WTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI- 183
D+E+ QL F NL ++ IYR KPVYWS SSRTALAE+ELEY+ DHVSK+ Y++
Sbjct: 154 MDREFEIRQLRVFQNLVRRGLIYRKHKPVYWSASSRTALAEAELEYRDDHVSKAAYIRFP 213
Query: 184 ---KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
L+ +P L L+A IWTTTPW+LPAN+ IA + + YSV V +VA
Sbjct: 214 IVSDLSSIP-ELANFDGKLYAAIWTTTPWTLPANRAIAIHNEIYYSVIQVGSDGYLVASD 272
Query: 241 LVESLKWTFQTDIEVVCD-FPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLVH 298
VE+++ D +VV D PG L+ + Y + + K ++ A FV++ GTGLVH
Sbjct: 273 RVEAMR-EMLPDFQVVVDSIPGSSLKGLEYQNRLRGKSAPSQSIIEADFVTADSGTGLVH 331
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLV 353
AP HGQDD+ I I + G ++ +A P +IL G VL LV
Sbjct: 332 IAPGHGQDDYEACSKLGIEAFAPIDDGGHFTKEAYPDDPEKLTSAPSILDGGSQAVLDLV 391
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
DVL T +H YPYDWRTK+PV+ +A+ QWF D IK +AL
Sbjct: 392 NDDVLGTHKLRHKYPYDWRTKRPVVTRATAQWFADVGSIKEDALAA 437
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 1127 NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALAC 1186
+IL G VL LV DVL T +H YPYDWRTK+PV+ +A+ QWF D IK +ALA
Sbjct: 378 SILDGGSQAVLDLVNDDVLGTHKLRHKYPYDWRTKRPVVTRATAQWFADVGSIKEDALAA 437
Query: 1187 LEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD-GDTIIVNEANIKHFCTL 1245
L+ V FVPE + L I R WCISRQR WGVPIP YD ++ I+H ++
Sbjct: 438 LKDVRFVPEGGRVRLESFIKGRSEWCISRQRSWGVPIPALYDESGNAVMTVKTIEHIISV 497
Query: 1246 IDEHGPDFWWS 1256
+ E W+S
Sbjct: 498 MQERTSSAWFS 508
>gi|194468388|ref|ZP_03074374.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
gi|194453241|gb|EDX42139.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
Length = 950
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/622 (36%), Positives = 336/622 (54%), Gaps = 63/622 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ L D + ++WTTTPW++PA++ +A N
Sbjct: 210 SALAEAEVEYH-DVVAKTAFFVEQIKDGKGRL---DNDTYLVVWTTTPWTVPASEAVAVN 265
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
P +YSV VK AN +VA L+E L D +VV GQ L+ +T HP
Sbjct: 266 PKFDYSV--VKPANDDRKFVVATDLLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPY-- 321
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RDL + A +V++ GTGLVH AP +G +D+ +P+ I +QG + + G G
Sbjct: 322 LDRDLLVGLADYVTADAGTGLVHTAPGYGDEDYNFGKKYDLPIFAPINDQGVLTKENGDG 381
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ D D L +E + +L E QHSYP+DWRTK+P+I +A+ QWF+ E+++
Sbjct: 382 FEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMR 440
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
L LE+V + PE K LR+ I R W ISRQRVWGVP+P+FY D T I+ E I
Sbjct: 441 QNILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIMEEETI 500
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L ++G + W+ + LL N N TK DI+D+WFDSG S VL
Sbjct: 501 NHVAELFAKYGSNVWFEREAKDLLPEGYTNEHSPNGKFTKETDIMDVWFDSGSSHQGVLA 560
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA++Y+EG DQ GWF SSL+TSV AP++ + GF +D++G KMSKS
Sbjct: 561 ERDYLTYPANLYLEGSDQYRGWFNSSLITSVVCSGHAPYKEIVSQGFTLDKRGNKMSKSQ 620
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDP 878
GNVI + + Q G +++R WV +A S D
Sbjct: 621 GNVIDPNKVVQ-----------------------------QMGAEIIRLWVMSADTSADV 651
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V +G + +K+R++ R+LL + + ++S + VD YML +L F
Sbjct: 652 RVSMG--TFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVKLNHFL 709
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
TM + + + A +VL+NFV N+LSAFY + KD LY ++ N E R S ++I
Sbjct: 710 KTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTVFYDIL 769
Query: 995 HVLLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH EEV+S++
Sbjct: 770 LTLVKLLTPILPHTTEEVWSYM 791
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 232/396 (58%), Gaps = 20/396 (5%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HGL
Sbjct: 59 RQKLNEGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGL 118
Query: 71 PIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE + S K +S + R + +AL+ ++ Q+ +F+ GV +W+H Y T DKE
Sbjct: 119 PIEHQLTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDH-PYLTLDKE 177
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++
Sbjct: 178 FEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFVEQIKDG 236
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVES 244
L D + ++WTTTPW++PA++ +A NP +YSV VK AN +VA L+E
Sbjct: 237 KGRL---DNDTYLVVWTTTPWTVPASEAVAVNPKFDYSV--VKPANDDRKFVVATDLLEK 291
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L D EVV GQ L+ +T HP RDL + A +V++ GTGLVH AP +
Sbjct: 292 LAEKLGWEDYEVVDHLMGQELEGMTTQHPY--LDRDLLVGLADYVTADAGTGLVHTAPGY 349
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
G +D+ +P+ I +QG + + G G EG+ D D L +E + +L E
Sbjct: 350 GDEDYNFGKKYDLPIFAPINDQGVLTKENGDGFEGV-FYQDADDVSLQKLEENNALLLQE 408
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QHSYP+DWRTK+P+I +A+ QWF+ E+++ L
Sbjct: 409 PLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNIL 444
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I +QG + + G G EG+ + D L +E + +L E QHSYP+DWRTK+P+I
Sbjct: 368 INDQGVLTKENGDGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIF 426
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ E+++ L LE V + PE K LR+ I R W ISRQRVWGVP+P+F
Sbjct: 427 RATDQWFVSIEKMRQNILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIF 486
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L ++G + W+ + LL
Sbjct: 487 YAEDGTPIMEEETINHVAELFAKYGSNVWFEREAKDLL 524
Score = 44.7 bits (104), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
+IAK +LY ++ N E R S ++I L++ + PI+PH EEV+S++
Sbjct: 742 NIAKDVLYIEAENSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM 791
>gi|302666831|ref|XP_003025011.1| hypothetical protein TRV_00816 [Trichophyton verrucosum HKI 0517]
gi|291189091|gb|EFE44400.1| hypothetical protein TRV_00816 [Trichophyton verrucosum HKI 0517]
Length = 1012
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/644 (36%), Positives = 341/644 (52%), Gaps = 54/644 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DHIS + +K L+ +P+ +LE D+ A+IWT TPW+LPAN
Sbjct: 203 GTALAEAELEYKEDHISTAALVKFVLDNLPSQILEHPLLAGNDISAVIWTMTPWTLPANA 262
Query: 473 FIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITY-IHP 529
+A NP EY++ S + ++VA+ ++ L+ + D V+ G L + TY H
Sbjct: 263 ALAVNPDFEYTIVDSTRHGKLLVAQSRLQYLQELLEEDFTVIIPAIMGSELLNSTYRSHF 322
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
E +++ A FV++ G+G+VHCAP HG +D+ LA IP + +G+++ A
Sbjct: 323 KGPESEKQRIIAAEFVTADAGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSA 382
Query: 590 GPG----LEGLNILGDGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWF 643
P L G +LGDG V+ HL E +L +Y+H YPYDWR+K PVI++A++QWF
Sbjct: 383 MPTKPDLLTGKEVLGDGNHAVIKHLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWF 442
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGD 700
D I+ EA+ L+ V F+P S K L + R WCISRQR WGVPIP Y G+
Sbjct: 443 ADVGDIRGEAIQALQSVQFIPPSGKSRLETFVRNRSEWCISRQRAWGVPIPALYHRTTGE 502
Query: 701 TIIVNEANIKHFCTLIDEHGPDFWWSLSV--EQLLNTSDVNSN---VTKSNDILDIWFDS 755
I+ E+ + H +I+E G D WW+ + L S +S+ + D +D+WFDS
Sbjct: 503 AILTKES-VSHIMKMIEERGIDAWWTDDEFDQAWLPASLRDSSSPQYKRGTDTMDVWFDS 561
Query: 756 GISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALK--------HTAPFRNVFL 803
G SW+ + D PA VY+EG DQ GWF SSLLT ++ + APF+ +
Sbjct: 562 GTSWAQLKDDSPENPPADVYLEGSDQHRGWFQSSLLTYISHQLAEGGKSSFKAPFKTLIT 621
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY-- 861
HGF +D+ G KMSKS+GN I +I G P K + + +P Y
Sbjct: 622 HGFTLDQYGRKMSKSIGNTIQPDEIMGGTLLPPLKPKKIKGKGPKPN-----PDVPVYDA 676
Query: 862 -GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS-------E 913
G D LR W AA + V IG+ +L + + K R + + LLG L + E
Sbjct: 677 LGPDALRLW-AAGSDYTKDVIIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYE 735
Query: 914 STGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
S +I + V + + Q +D + ++ +A + + E SAFY +KDRL
Sbjct: 736 SLHAIDKIALVQLHNLVKSSQEAVDKM----EFFKAVTAMNKWANLEFSAFYIEAIKDRL 791
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
Y DS +G +R + TL +I+ + + PI+P L EE + H P
Sbjct: 792 YADSESGMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP 835
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/413 (43%), Positives = 251/413 (60%), Gaps = 22/413 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LYSWQ+ F LHDGPPYANG HIGHA+NKILKDI R L +GKRVHYVPGW
Sbjct: 42 DLYSWQQRNRPATATFTLHDGPPYANGDLHIGHALNKILKDIICRVQLAKGKRVHYVPGW 101
Query: 66 DCHGLPIELKAITSKDKLL--------SPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ + +L IR A+ A +T++ Q F +W ++ DW
Sbjct: 102 DCHGLPIELKALQGQKELGDLRSAGRDGAAQIRSAARQLAEKTVSQQMEGFRNWAIMGDW 161
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E N Y T +K++ + QL F + ++ IYR KPVYWSPSS TALAE+ELEYK DH+S
Sbjct: 162 E-NAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSGTALAEAELEYKEDHIST 220
Query: 178 SIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKG 232
+ +K L+ +P+ +LE D+ A+IWT TPW+LPAN +A NP EY++ S +
Sbjct: 221 AALVKFVLDNLPSQILEHPLLAGNDISAVIWTMTPWTLPANAALAVNPDFEYTIVDSTRH 280
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITY-IHPINKEQRDLKLLPAGFVSS 290
++VA+ ++ L+ + D V+ G L + TY H E +++ A FV++
Sbjct: 281 GKLLVAQSRLQYLQELLEEDFTVIIPAIMGSELLNSTYRSHFKGPESEKQRIIAAEFVTA 340
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGK 346
G+G+VHCAP HG +D+ LA IP + +G+++ A P L G +LGDG
Sbjct: 341 DAGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGN 400
Query: 347 DQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ HL E +L +Y+H YPYDWR+K PVI++A++QWF D I+ EA+
Sbjct: 401 HAVIKHLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAI 453
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKK 1162
+ +G+++ A P L G +LG+G V+ HL E +L +Y+H YPYDWR+K
Sbjct: 372 VDGEGRFTQSAMPTKPDLLTGKEVLGDGNHAVIKHLSETGILIHKHDYKHKYPYDWRSKL 431
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ EA+ L+ V F+P S K L + R WCISRQR WGVP
Sbjct: 432 PVIIRATEQWFADVGDIRGEAIQALQSVQFIPPSGKSRLETFVRNRSEWCISRQRAWGVP 491
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ I+ E+ + H +I+E G D WW+
Sbjct: 492 IPALYHRTTGEAILTKES-VSHIMKMIEERGIDAWWT 527
>gi|184153233|ref|YP_001841574.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
gi|254782415|sp|B2G6L2.1|SYI_LACRJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|183224577|dbj|BAG25094.1| isoleucyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
Length = 931
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/620 (35%), Positives = 333/620 (53%), Gaps = 59/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ L D + ++WTTTPW++PA++ +A N
Sbjct: 191 SALAEAEVEYH-DVVAKTAFFVEQIKDGKGRL---DNDTYLVVWTTTPWTVPASEAVAVN 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +YSV + + +VA L+E L D +VV GQ L+ +T HP
Sbjct: 247 PKFDYSVVNPANDDRKFVVATDLLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPY--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
RDL + A +V++ GTGLVH AP +G DD+ +P+ I +QG + + G G E
Sbjct: 305 RDLLVGLADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFE 364
Query: 595 GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D D L +E + +L E QHSYP+DWRTK+P+I +A+ QWF+ E+++
Sbjct: 365 GV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQN 423
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L LE+V + PE K LR+ I R W ISRQRVWGVP+P+FY D T I+ E I H
Sbjct: 424 ILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIMEEETINH 483
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++G + W+ + LL N N TK DI+D+WFDSG S VL ++
Sbjct: 484 VAELFAKYGSNVWFEREAKDLLPEGYTNEHSPNGKFTKETDIMDVWFDSGSSHQGVLAER 543
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSV AP++ + GF +D++G KMSKS GN
Sbjct: 544 DYLTYPADLYLEGSDQYRGWFNSSLITSVVCSGHAPYKEIVSQGFTLDKRGNKMSKSQGN 603
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDPTV 880
VI + + Q G +++R WV +A S D V
Sbjct: 604 VIDPNKVVQ-----------------------------QMGAEIIRLWVMSADTSADVRV 634
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+G + +K+R++ R+LL + + ++S + VD YML +L F T
Sbjct: 635 SMG--TFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVKLNHFLKT 692
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
M + + + A +VL+NFV N+LSAFY + KD LY ++ N E R S ++I
Sbjct: 693 MREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTVFYDILLT 752
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH EEV+S++
Sbjct: 753 LVKLLTPILPHTTEEVWSYM 772
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 230/394 (58%), Gaps = 16/394 (4%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HGL
Sbjct: 40 RQKLNEGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGL 99
Query: 71 PIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE + S K +S + R + +AL+ ++ Q+ +F+ GV +W+H Y T DKE
Sbjct: 100 PIEHQLTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDH-PYLTLDKE 158
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++
Sbjct: 159 FEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFVEQIKDG 217
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESLK 246
L D + ++WTTTPW++PA++ +A NP +YSV + + +VA L+E L
Sbjct: 218 KGRL---DNDTYLVVWTTTPWTVPASEAVAVNPKFDYSVVNPANDDRKFVVATDLLEKLA 274
Query: 247 WTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
D EVV GQ L+ +T HP RDL + A +V++ GTGLVH AP +G
Sbjct: 275 EKLGWEDYEVVDHLMGQELEGMTTQHPY--LDRDLLVGLADYVTADAGTGLVHTAPGYGD 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD+ +P+ I +QG + + G G EG+ D D L +E + +L E
Sbjct: 333 DDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPL 391
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QHSYP+DWRTK+P+I +A+ QWF+ E+++ L
Sbjct: 392 QHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNIL 425
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I +QG + + G G EG+ + D L +E + +L E QHSYP+DWRTK+P+I
Sbjct: 349 INDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ E+++ L LE V + PE K LR+ I R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIEKMRQNILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L ++G + W+ + LL
Sbjct: 468 YAEDGTPIMEEETINHVAELFAKYGSNVWFEREAKDLL 505
Score = 44.7 bits (104), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
+IAK +LY ++ N E R S ++I L++ + PI+PH EEV+S++
Sbjct: 723 NIAKDVLYIEAENSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM 772
>gi|403383412|ref|ZP_10925469.1| isoleucyl-tRNA synthetase 1 [Kurthia sp. JC30]
Length = 926
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/630 (35%), Positives = 334/630 (53%), Gaps = 83/630 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ K+ L D +IWTTTPW+LPAN I+ N
Sbjct: 192 SALAEAEIEYK-DIKSPSIYVAFKVADGKGVL---NNDEEIVIWTTTPWTLPANLGISVN 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y V V +VAK L+ E + W D+ + + G L++IT HP+
Sbjct: 248 PEFQYVVVKVADRKFVVAKELLNTVAEKIGWE---DVQIDREVGGAELENITAKHPLF-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG--- 590
R ++ V+ GTG VH AP HG+DD+ + + +L+++ N+G + AG
Sbjct: 303 DRTSLVMLGDHVTLEAGTGCVHTAPGHGEDDYQVGKRYGLEILSVVDNRGILTDAAGEFA 362
Query: 591 ---------PGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQ 641
P E L LG +L ++HSYP+DWRTKKPVI +A+ Q
Sbjct: 363 GQFYDKANKPICEKLEELGA------------LLSLTFFEHSYPHDWRTKKPVIFRATPQ 410
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DG 699
WF ++ +PE L + + NF PE + L + I R WCISRQR WGVPIPVFY +G
Sbjct: 411 WFASIDKFRPELLQAIRDTNFTPEWGETRLFNMIRDRGDWCISRQRAWGVPIPVFYAENG 470
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFD 754
+ II E I H L EHG + W+ + ++LL + N TK NDI+D+WFD
Sbjct: 471 EEIITEE-TIAHVQDLFREHGSNIWFQKTAKELLPEGFTHPGSPNGEFTKENDIMDVWFD 529
Query: 755 SGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
SG S VL ++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + HGFV+D
Sbjct: 530 SGSSHQGVLAERGMNYPADLYLEGSDQYRGWFNSSLITSVAMSGHAPYKGLLSHGFVLDG 589
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
G KMSKS+GN+I+ AK + YG D+LR WV
Sbjct: 590 DGRKMSKSLGNIIAP-----------------------------AKIMQQYGADILRMWV 620
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
A+ V I ++L + +K+R++L+++ G LH+ + T + R VD YM
Sbjct: 621 AS-VDYTADVRISMDMLKQVSEMYRKVRNTLKFVHGNLHDFNVETDYVQYEDLREVDQYM 679
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L + T+ Y ++++A + + NF+ ELS+FY + KD +Y ++ N AR +
Sbjct: 680 YMELQKLIKTVRAAYDKYEFATVYKAVNNFIATELSSFYLDIAKDVVYVEAPNSHARRAM 739
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1016
+H+ L++ +API+PH A+E+Y ++
Sbjct: 740 QSVMHDTLDALVKLLAPIIPHTADEMYGYM 769
Score = 279 bits (713), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 228/404 (56%), Gaps = 42/404 (10%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E +P FILHDGPPYANG H+GHA+NK+LKD+ R + G V YVPGWD HGLPI
Sbjct: 43 ERTKDRPAFILHDGPPYANGDIHMGHALNKVLKDMINRHRSMTGYHVPYVPGWDTHGLPI 102
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T+K K +S + R+ K +ALE ++ Q+ +F+ GV DWE N Y T +
Sbjct: 103 E-QALTNKGHDRKKMSIAEFRELCKEYALEQVSNQREQFKRIGVRGDWE-NPYITLRPAF 160
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+ K+
Sbjct: 161 EARQIGVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYK-DIKSPSIYVAFKVADGK 219
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV----ESL 245
L D +IWTTTPW+LPAN I+ NP +Y V V +VAK L+ E +
Sbjct: 220 GVL---NNDEEIVIWTTTPWTLPANLGISVNPEFQYVVVKVADRKFVVAKELLNTVAEKI 276
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W D+++ + G L++IT HP+ R ++ V+ GTG VH AP HG+
Sbjct: 277 GW---EDVQIDREVGGAELENITAKHPLF--DRTSLVMLGDHVTLEAGTGCVHTAPGHGE 331
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAG------------PGLEGLNILGDGKDQVLHLV 353
DD+ + + +L+++ N+G + AG P E L LG
Sbjct: 332 DDYQVGKRYGLEILSVVDNRGILTDAAGEFAGQFYDKANKPICEKLEELG---------- 381
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L ++HSYP+DWRTKKPVI +A+ QWF ++ +PE L
Sbjct: 382 --ALLSLTFFEHSYPHDWRTKKPVIFRATPQWFASIDKFRPELL 423
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
++HSYP+DWRTKKPVI +A+ QWF ++ +PE L + NF PE + L + I R
Sbjct: 389 FEHSYPHDWRTKKPVIFRATPQWFASIDKFRPELLQAIRDTNFTPEWGETRLFNMIRDRG 448
Query: 1210 YWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WCISRQR WGVPIPVFY +G+ II E I H L EHG + W+ ++LL
Sbjct: 449 DWCISRQRAWGVPIPVFYAENGEEIITEE-TIAHVQDLFREHGSNIWFQKTAKELL 503
Score = 43.9 bits (102), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 1039 IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
IAK ++Y ++ N AR + +H+ L++ +API+PH A+E+Y ++
Sbjct: 721 IAKDVVYVEAPNSHARRAMQSVMHDTLDALVKLLAPIIPHTADEMYGYM 769
>gi|19703419|ref|NP_602981.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296328739|ref|ZP_06871253.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|81485032|sp|Q8RH47.1|SYI_FUSNN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|19713491|gb|AAL94280.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296154074|gb|EFG94878.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 933
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 344/622 (55%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH+S SIY++++ N+ + D++ LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFNEDVYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ LA K+PV++ I ++G + +AG +GL
Sbjct: 313 GLIILGDHVTADAGTGAVHTAPGHGQDDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W S E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICDLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLHRPCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGKKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPEDV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L + +
Sbjct: 643 RISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ LP+
Sbjct: 763 LTKMVAPILSFTAEEIWESLPA 784
Score = 310 bits (795), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 234/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI L+ +G R YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIILKYKTFRGFRSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
K + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVGKAREMSALEIRKLCEKYAKKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y YI++ LKPVYWSP++ TALAE+E+EY DHVS SIY++++ N+ +
Sbjct: 172 FGEIYVNGYIFKGLKPVYWSPATETALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D++ LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDVYVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKDIGIENFEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++ LA K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLIILGDHVTADAGTGAVHTAPGHGQDDYVVGLAYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + HL E +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICDLVREHGSNIWVEKSPEELI 514
>gi|148543832|ref|YP_001271202.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
gi|148530866|gb|ABQ82865.1| Isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
Length = 960
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/620 (35%), Positives = 333/620 (53%), Gaps = 59/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ L D + ++WTTTPW++PA++ +A N
Sbjct: 220 SALAEAEVEYH-DVVAKTAFFVEQIKDGKGRL---DNDTYLVVWTTTPWTVPASEAVAVN 275
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +YSV + + +VA L+E L D +VV GQ L+ +T HP
Sbjct: 276 PKFDYSVVNPANDDRKFVVATDLLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPY--LD 333
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
RDL + A +V++ GTGLVH AP +G DD+ +P+ I +QG + + G G E
Sbjct: 334 RDLLVGLADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFE 393
Query: 595 GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D D L +E + +L E QHSYP+DWRTK+P+I +A+ QWF+ E+++
Sbjct: 394 GV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQN 452
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L LE+V + PE K LR+ I R W ISRQRVWGVP+P+FY D T I+ E I H
Sbjct: 453 ILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIMEEETINH 512
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++G + W+ + LL N N TK DI+D+WFDSG S VL ++
Sbjct: 513 VAELFAKYGSNVWFEREAKDLLPEGYTNEHSPNGKFTKETDIMDVWFDSGSSHQGVLAER 572
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSV AP++ + GF +D++G KMSKS GN
Sbjct: 573 DYLTYPADLYLEGSDQYRGWFNSSLITSVVCSGHAPYKEIVSQGFTLDKRGNKMSKSQGN 632
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDPTV 880
VI + + Q G +++R WV +A S D V
Sbjct: 633 VIDPNKVVQ-----------------------------QMGAEIIRLWVMSADTSADVRV 663
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+G + +K+R++ R+LL + + ++S + VD YML +L F T
Sbjct: 664 SMG--TFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVKLNHFLKT 721
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
M + + + A +VL+NFV N+LSAFY + KD LY ++ N E R S ++I
Sbjct: 722 MREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTVFYDILLT 781
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH EEV+S++
Sbjct: 782 LVKLLTPILPHTTEEVWSYM 801
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 230/394 (58%), Gaps = 16/394 (4%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HGL
Sbjct: 69 RQKLNEGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGL 128
Query: 71 PIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE + S K +S + R + +AL+ ++ Q+ +F+ GV +W+H Y T DKE
Sbjct: 129 PIEHQLTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDH-PYLTLDKE 187
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++
Sbjct: 188 FEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFVEQIKDG 246
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESLK 246
L D + ++WTTTPW++PA++ +A NP +YSV + + +VA L+E L
Sbjct: 247 KGRL---DNDTYLVVWTTTPWTVPASEAVAVNPKFDYSVVNPANDDRKFVVATDLLEKLA 303
Query: 247 WTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
D EVV GQ L+ +T HP RDL + A +V++ GTGLVH AP +G
Sbjct: 304 EKLGWEDYEVVDHLMGQELEGMTTQHPY--LDRDLLVGLADYVTADAGTGLVHTAPGYGD 361
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD+ +P+ I +QG + + G G EG+ D D L +E + +L E
Sbjct: 362 DDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPL 420
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QHSYP+DWRTK+P+I +A+ QWF+ E+++ L
Sbjct: 421 QHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNIL 454
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I +QG + + G G EG+ + D L +E + +L E QHSYP+DWRTK+P+I
Sbjct: 378 INDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIF 436
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ E+++ L LE V + PE K LR+ I R W ISRQRVWGVP+P+F
Sbjct: 437 RATDQWFVSIEKMRQNILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIF 496
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L ++G + W+ + LL
Sbjct: 497 YAEDGTPIMEEETINHVAELFAKYGSNVWFEREAKDLL 534
Score = 44.7 bits (104), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
+IAK +LY ++ N E R S ++I L++ + PI+PH EEV+S++
Sbjct: 752 NIAKDVLYIEAENSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM 801
>gi|227364736|ref|ZP_03848785.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
gi|325682637|ref|ZP_08162154.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
gi|227070195|gb|EEI08569.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
gi|324978476|gb|EGC15426.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
Length = 950
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/620 (35%), Positives = 333/620 (53%), Gaps = 59/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ L D + ++WTTTPW++PA++ +A N
Sbjct: 210 SALAEAEVEYH-DVVAKTAFFVEQIKDGKGRL---DNDTYLVVWTTTPWTVPASEAVAVN 265
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +YSV + + +VA L+E L D +VV GQ L+ +T HP
Sbjct: 266 PKFDYSVVNPANDDRKFVVATDLLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPY--LD 323
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
RDL + A +V++ GTGLVH AP +G DD+ +P+ I +QG + + G G E
Sbjct: 324 RDLLVGLADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFE 383
Query: 595 GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D D L +E + +L E QHSYP+DWRTK+P+I +A+ QWF+ E+++
Sbjct: 384 GV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQN 442
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L LE+V + PE K LR+ I R W ISRQRVWGVP+P+FY D T I+ E I H
Sbjct: 443 ILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIMEEETINH 502
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++G + W+ + LL N N TK DI+D+WFDSG S VL ++
Sbjct: 503 VAELFAKYGSNVWFEREAKDLLPEGYTNEHSPNGKFTKETDIMDVWFDSGSSHQGVLAER 562
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSV AP++ + GF +D++G KMSKS GN
Sbjct: 563 DYLTYPADLYLEGSDQYRGWFNSSLITSVVCSGHAPYKEIVSQGFTLDKRGNKMSKSQGN 622
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDPTV 880
VI + + Q G +++R WV +A S D V
Sbjct: 623 VIDPNKVVQ-----------------------------QMGAEIIRLWVMSADTSADVRV 653
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+G + +K+R++ R+LL + + ++S + VD YML +L F T
Sbjct: 654 SMG--TFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEKLQSVDKYMLVKLNHFLKT 711
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
M + + + A +VL+NFV N+LSAFY + KD LY ++ N E R S ++I
Sbjct: 712 MREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAENSEVRRSMQTVFYDILLT 771
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH EEV+S++
Sbjct: 772 LVKLLTPILPHTTEEVWSYM 791
Score = 283 bits (725), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 230/394 (58%), Gaps = 16/394 (4%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HGL
Sbjct: 59 RQKLNEGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGL 118
Query: 71 PIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE + S K +S + R + +AL+ ++ Q+ +F+ GV +W+H Y T DKE
Sbjct: 119 PIEHQLTKSGYDRKKMSLTEFRDLCREYALKQVDKQRTDFKRLGVSGEWDH-PYLTLDKE 177
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++
Sbjct: 178 FEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFVEQIKDG 236
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESLK 246
L D + ++WTTTPW++PA++ +A NP +YSV + + +VA L+E L
Sbjct: 237 KGRL---DNDTYLVVWTTTPWTVPASEAVAVNPKFDYSVVNPANDDRKFVVATDLLEKLA 293
Query: 247 WTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
D EVV GQ L+ +T HP RDL + A +V++ GTGLVH AP +G
Sbjct: 294 EKLGWEDYEVVDHLMGQELEGMTTQHPY--LDRDLLVGLADYVTADAGTGLVHTAPGYGD 351
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD+ +P+ I +QG + + G G EG+ D D L +E + +L E
Sbjct: 352 DDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPL 410
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QHSYP+DWRTK+P+I +A+ QWF+ E+++ L
Sbjct: 411 QHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNIL 444
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I +QG + + G G EG+ + D L +E + +L E QHSYP+DWRTK+P+I
Sbjct: 368 INDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQPIIF 426
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ E+++ L LE V + PE K LR+ I R W ISRQRVWGVP+P+F
Sbjct: 427 RATDQWFVSIEKMRQNILDALEDVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIF 486
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L ++G + W+ + LL
Sbjct: 487 YAEDGTPIMEEETINHVAELFAKYGSNVWFEREAKDLL 524
Score = 44.7 bits (104), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
+IAK +LY ++ N E R S ++I L++ + PI+PH EEV+S++
Sbjct: 742 NIAKDVLYIEAENSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM 791
>gi|345571411|gb|EGX54225.1| hypothetical protein AOL_s00004g258 [Arthrobotrys oligospora ATCC
24927]
Length = 1016
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/643 (36%), Positives = 349/643 (54%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H SK+ +K L + ++L + A IWTTTPWS+P N I
Sbjct: 216 TALAEAELEYNEAHNSKAATVKFPLANLGSYLSSLPNVDKTISAAIWTTTPWSIPGNLAI 275
Query: 475 AFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPINK 532
NP L+Y V S K ++ + VE+L+ +++V+ D PG+ L D+TY HP+
Sbjct: 276 LINPDLKYVVVNSSKHGQLLAGEERVEHLQKLMDEELEVIVKDIPGKALLDVTYNHPLFP 335
Query: 533 EQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+L A +V+S GTGLVHCAP HG +D+L I + + + G Y+ DA P
Sbjct: 336 STASPHPVLAADYVTSDTGTGLVHCAPGHGMEDYLTCQKHNIQPFSPVDDSGNYTSDALP 395
Query: 592 --GLEGLNILGDGKDQVLHLV-EPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDT 646
L GL +L G+D+++ L+ + +VL + H YPYDWRTK P+I +A+ QWF
Sbjct: 396 TYDLTGLPVLSAGQDKIISLLSDHNVLLGCQPKFLHKYPYDWRTKLPIIQRATPQWFAGV 455
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTII 703
E IK A++ +E++ FVPE+ + L ++ R WCISRQR WGVPIP Y+ GD ++
Sbjct: 456 EMIKESAISEIEKIQFVPEAGQHRLHAYVSGRDEWCISRQRTWGVPIPALYEVESGDALL 515
Query: 704 VNEANIKHFCTLIDEHGPDFWWS-LSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHV 762
E+ ++H ++I++ G D WWS E+ + + + + +D+WFDSG SW+ +
Sbjct: 516 TEES-VEHIISVIEKKGTDAWWSDPDSEEWVAPQYRDKKYKRGTETMDVWFDSGTSWT-L 573
Query: 763 LKDKPAH--------VYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+++K +Y+EG DQ GWF SSLLT VA AP+ V HGFV+DEKG K
Sbjct: 574 IREKLGEREGRALVDIYLEGSDQHRGWFQSSLLTCVASTGKAPYEKVVTHGFVLDEKGKK 633
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVIS-------------------AHDITQGA 855
MSKS+GN+IS +I G +Y + G + + +Q A
Sbjct: 634 MSKSLGNIISPQEIIDG-----SYWQRAGQMAKVAQKPEKAKKQKAEKKPKVVAESSQPA 688
Query: 856 KKLPAYGVDVLRWWVA-AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLH--NHS 912
KK + +D LR WVA + D T IG+ +L +Q+ ++K R + R+LLG L +
Sbjct: 689 KKEQSPDIDTLRLWVAMTDFTADGT--IGEKVLRFAQEALRKYRMTGRFLLGNLGDWDGK 746
Query: 913 ESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
E + +D Y L RL E + Y F +++ F LSAFY ++KDR
Sbjct: 747 EVPYNELLKIDQYALYRLAELNQSSKAEYDTFAFSKIFHSTNVFNKVFLSAFYLNILKDR 806
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
LY D +G +R S TL I L ++PI+P L EE++SH
Sbjct: 807 LYVD--DGISRASAQTTLFYILKHYLNILSPIVPLLTEEIWSH 847
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 247/421 (58%), Gaps = 30/421 (7%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ E L F+ HDGPP+ANG H GHA+NKILKDI +R N+ GKRV Y+PGW
Sbjct: 44 DLYKWQWENLPSDKTFVFHDGPPFANGALHTGHAMNKILKDIIVRYNIKLGKRVSYIPGW 103
Query: 66 DCHGLPIELKAITS------------------KDKLLSPLDIRKKAKNFALETINTQKAE 107
DCHGLPIELKA+ + K+K L +IR A+ A ET+ TQKA
Sbjct: 104 DCHGLPIELKALQNIRGTTENVSMMSPAEAIEKNKDLHATEIRGLARKLAAETVETQKAG 163
Query: 108 FESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESE 167
F SWGV+ DWE N Y T D EY QL F + K+ IYR KPVYWSPSSRTALAE+E
Sbjct: 164 FRSWGVIGDWE-NAYRTMDLEYEVRQLRVFKEMTKKGLIYRHFKPVYWSPSSRTALAEAE 222
Query: 168 LEYKPDHVSKSIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFIAFNPALE 224
LEY H SK+ +K L + ++L + A IWTTTPWS+P N I NP L+
Sbjct: 223 LEYNEAHNSKAATVKFPLANLGSYLSSLPNVDKTISAAIWTTTPWSIPGNLAILINPDLK 282
Query: 225 YSVA-SVKGANVIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINKEQRDLK- 281
Y V S K ++ + VE L+ ++EV+ D PG+ L D+TY HP+
Sbjct: 283 YVVVNSSKHGQLLAGEERVEHLQKLMDEELEVIVKDIPGKALLDVTYNHPLFPSTASPHP 342
Query: 282 LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP--GLEGL 339
+L A +V+S GTGLVHCAP HG +D+L I + + + G Y+ DA P L GL
Sbjct: 343 VLAADYVTSDTGTGLVHCAPGHGMEDYLTCQKHNIQPFSPVDDSGNYTSDALPTYDLTGL 402
Query: 340 NILGDGKDQVLHLV-EPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
+L G+D+++ L+ + +VL + H YPYDWRTK P+I +A+ QWF E IK A
Sbjct: 403 PVLSAGQDKIISLLSDHNVLLGCQPKFLHKYPYDWRTKLPIIQRATPQWFAGVEMIKESA 462
Query: 397 L 397
+
Sbjct: 463 I 463
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 98/158 (62%), Gaps = 9/158 (5%)
Query: 1109 ITNQGKYSPDAGP--GLEGLNILGEGKDQVLHLV-EPDVLW--TENYQHSYPYDWRTKKP 1163
+ + G Y+ DA P L GL +L G+D+++ L+ + +VL + H YPYDWRTK P
Sbjct: 383 VDDSGNYTSDALPTYDLTGLPVLSAGQDKIISLLSDHNVLLGCQPKFLHKYPYDWRTKLP 442
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+I +A+ QWF E IK A++ +E + FVPE+ + L ++ R WCISRQR WGVPI
Sbjct: 443 IIQRATPQWFAGVEMIKESAISEIEKIQFVPEAGQHRLHAYVSGRDEWCISRQRTWGVPI 502
Query: 1224 PVFYD---GDTIIVNEANIKHFCTLIDEHGPDFWWSLP 1258
P Y+ GD ++ E+ ++H ++I++ G D WWS P
Sbjct: 503 PALYEVESGDALLTEES-VEHIISVIEKKGTDAWWSDP 539
>gi|268567019|ref|XP_002639870.1| C. briggsae CBR-IRS-2 protein [Caenorhabditis briggsae]
Length = 947
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/636 (35%), Positives = 335/636 (52%), Gaps = 61/636 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-------LHALIWTTTPWSLPA 470
TALAESELEY H S S+Y + K+ + + +D +AL+WTTTPW+LP
Sbjct: 209 TALAESELEYNEKHQSTSVYFRFKMINFSSSDVTWTSDSSSKLSQFYALVWTTTPWTLPL 268
Query: 471 NQFIAFNPALEYSVASVK-------GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQD 523
N I +P ++Y++ + + I+A LV+ + + + VV + L
Sbjct: 269 NNAICISPTVKYAIIQFENDVNNPTSSYYIIASNLVKEFETSTEKKCRVVGTVDSENLIG 328
Query: 524 ITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 583
Y + E L + A VS + GTGLVH A AHG D+ +AL +K V + + ++G
Sbjct: 329 KRYRSCWHNELA-LPIYEATHVSDTAGTGLVHTAFAHGLQDYDVALTKKERVQSFVDSRG 387
Query: 584 KYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
Y+ G L+G ++LGDG+++ L L+ D++ T Y HSYPYDWRTKKPVI+++S+QWF
Sbjct: 388 CYTRHFGHSLDGKSVLGDGQNEALRLLNHDIVHTSQYVHSYPYDWRTKKPVIIRSSEQWF 447
Query: 644 IDTERIKPEALACLEEVNFVPESA--KKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--G 699
ID + I A A L+++ + + +L+ + R WCISRQR WG PIP D G
Sbjct: 448 IDVDEIGQRAAAMLDDILVTAGDSDLRGSLKQLVKTRKSWCISRQRAWGTPIPGLVDEKG 507
Query: 700 DTIIVNEANIKHFCTLIDEHGP-DFWWSLSVEQLLNTSDVN----------SNVTKSNDI 748
++ + I+ LI E G D WW + + +L+ DV S +TK+ DI
Sbjct: 508 NSYTSRKL-IEWIAQLIRERGSTDVWWEIDTQYILDNEDVRESLNIPTDVLSKLTKNMDI 566
Query: 749 LDIWFDSGISWSHVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFL 803
+D+W DSG++W D A + +EG+DQ GWF S LLTS+A ++ P++ + +
Sbjct: 567 MDVWLDSGLAWYAAKLDDDERNHIADIVLEGVDQFRGWFQSLLLTSIAAQNKLPYKRIMV 626
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGV 863
HGF +DEK KMSKS+GNV+ D T +T G+ K A G
Sbjct: 627 HGFCIDEKNNKMSKSIGNVV---DPTM--------------------LTDGSLKQKAIGA 663
Query: 864 DVLRWWVAAHASKDP-TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN-HSESTGSISRY 921
D LR+WVA S++ IG I+ + +R+ R+++G H S +
Sbjct: 664 DGLRFWVAQSGSENAGESKIGPIIIEDVDKKIIALRNGFRFMIGGCQGFHGNQIESSLKS 723
Query: 922 VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGE 981
+D+ ML+ F T Y EF++ + L F+ SA Y V+DRLYCD I E
Sbjct: 724 LDLDMLQNCDNFVKTSIGNYEEFKFRTVANDLTQFMQRNFSANYVKYVRDRLYCDRIGSE 783
Query: 982 ARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ LS TLH + H L T++P++PHL+ EV HLP
Sbjct: 784 SHLSAQFTLHRLAHNLAHTISPLLPHLSAEVLHHLP 819
Score = 323 bits (827), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/410 (43%), Positives = 238/410 (58%), Gaps = 18/410 (4%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
G ++LY WQ E G F L DGPPYANG H GHA+NKILKD ++S + G RV +
Sbjct: 50 GLNDLYVWQSENRKGAEVFELLDGPPYANGEAHTGHAINKILKDFVVKSRIGLGYRVRFR 109
Query: 63 PGWDCHGLPIELKAITSKD--KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
PGWDCHGLPIELK + K SPL+IR A+ A E I Q F WGV ADW+H
Sbjct: 110 PGWDCHGLPIELKIGKQQGTTKQRSPLEIRNAARVIADEAIGKQMNAFRRWGVTADWKHP 169
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T E+V QL F L +Q +YR KPVYWSPSS TALAESELEY H S S+Y
Sbjct: 170 -YVTKSPEFVAAQLDVFARLVEQKLVYRSFKPVYWSPSSNTALAESELEYNEKHQSTSVY 228
Query: 181 LKIKLNQVPAHLLEGATD-------LHALIWTTTPWSLPANQFIAFNPALEYSVASVK-- 231
+ K+ + + +D +AL+WTTTPW+LP N I +P ++Y++ +
Sbjct: 229 FRFKMINFSSSDVTWTSDSSSKLSQFYALVWTTTPWTLPLNNAICISPTVKYAIIQFEND 288
Query: 232 -----GANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG 286
+ I+A LV+ + + + VV + L Y + E L + A
Sbjct: 289 VNNPTSSYYIIASNLVKEFETSTEKKCRVVGTVDSENLIGKRYRSCWHNELA-LPIYEAT 347
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGK 346
VS + GTGLVH A AHG D+ +AL +K V + + ++G Y+ G L+G ++LGDG+
Sbjct: 348 HVSDTAGTGLVHTAFAHGLQDYDVALTKKERVQSFVDSRGCYTRHFGHSLDGKSVLGDGQ 407
Query: 347 DQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++ L L+ D++ T Y HSYPYDWRTKKPVI+++S+QWFID + I A
Sbjct: 408 NEALRLLNHDIVHTSQYVHSYPYDWRTKKPVIIRSSEQWFIDVDEIGQRA 457
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 101/171 (59%), Gaps = 6/171 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+ + ++G Y+ G L+G ++LG+G+++ L L+ D++ T Y HSYPYDWRTKKPVI+
Sbjct: 381 SFVDSRGCYTRHFGHSLDGKSVLGDGQNEALRLLNHDIVHTSQYVHSYPYDWRTKKPVII 440
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESA--KKSLRDQIAQRPYWCISRQRVWGVPIP 1224
++S+QWFID + I A A L+ + + + SL+ + R WCISRQR WG PIP
Sbjct: 441 RSSEQWFIDVDEIGQRAAAMLDDILVTAGDSDLRGSLKQLVKTRKSWCISRQRAWGTPIP 500
Query: 1225 VFYD--GDTIIVNEANIKHFCTLIDEHGP-DFWWSLPVEQLLNTSDVNSNV 1272
D G++ + I+ LI E G D WW + + +L+ DV ++
Sbjct: 501 GLVDEKGNSYTSRKL-IEWIAQLIRERGSTDVWWEIDTQYILDNEDVRESL 550
>gi|46107614|ref|XP_380866.1| hypothetical protein FG00690.1 [Gibberella zeae PH-1]
Length = 997
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 238/630 (37%), Positives = 331/630 (52%), Gaps = 47/630 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFI 474
TALAE+ELEY+ +H+SK+ Y++ + + + E A L+A IWTTTPW+LPAN+ I
Sbjct: 190 TALAEAELEYRDEHVSKAAYIRFPIVSDLSSISELANFNGKLYAAIWTTTPWTLPANRAI 249
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPI-NK 532
A + + YSV V +VA VE ++ D VV D PG L+ + Y + + K
Sbjct: 250 AIHNEIYYSVIQVGSDGYLVASDRVEAMR-EMLPDFQVVVDSIPGSSLKGLEYQNRLRGK 308
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ A FV++ GTGLVH AP HGQDD+ I I + G ++ +A P
Sbjct: 309 SAPSQSIIEADFVTADSGTGLVHIAPGHGQDDYEACSKLGIEAFAPIDDGGHFTEEAYPD 368
Query: 593 -----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
+IL G VL LV DVL T +H YPYDWRTK+PV+ +A+ QWF D
Sbjct: 369 DPEKLTSAPSILDGGSQAVLDLVNDDVLGTHKLRHKYPYDWRTKRPVVTRATAQWFADVG 428
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVN 705
IK +ALA L++V FVPE + L I R WCISRQR WGVPIP YD G+ ++
Sbjct: 429 SIKEDALAALKDVRFVPEGGRVRLESFIKGRSEWCISRQRSWGVPIPALYDESGNAVMTV 488
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
E I+H +++ E W+S S + S++ + D +D+WFDSG SW+
Sbjct: 489 E-TIEHIISVMQERTSSAWFSDSPDDPAWIPSNLQGKYRRGTDTMDVWFDSGSSWTET-- 545
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVAL--------KHTAPFRNVFLHGFVVDEKGAKMS 816
+ A VY+EG DQ GWF SSLLT VA K +APF+ + HGF +D +G KMS
Sbjct: 546 EGRADVYLEGSDQHRGWFQSSLLTYVATQKSRETTDKISAPFKTLVTHGFTLDGQGKKMS 605
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN+I + G+ P K +G + G D +R W AA A
Sbjct: 606 KSLGNMIVPSQVMDGSLLGPVKTKG-----------KGGPQSNGLGADAVRLW-AASADF 653
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNT 936
V IG+ IL Q + K R+ ++ LLG L+ E+ S +D L +L + +
Sbjct: 654 TTDVLIGQTILQPVQTSLIKYRTIIKMLLGSLNQ--EARQSPLTKLDQIALVQLSDTMSQ 711
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +F++ RA ++ +V +LSAFY +KDRLYC G L IF
Sbjct: 712 VMESYNDFEFYRAVSMINRWVAADLSAFYLEGLKDRLYCGDGGG--------VLEPIFIG 763
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
LR +API P L EE +SH P+ SS
Sbjct: 764 FLRMLAPITPMLVEEAWSHRPTWMAEDSSL 793
Score = 330 bits (846), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/405 (44%), Positives = 246/405 (60%), Gaps = 13/405 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ E + F LHDGPPYANG H+GHA+NK+LKD+T+R + QG++V Y PGW
Sbjct: 35 DLYVWQGENRPEEKSFTLHDGPPYANGNLHVGHAMNKVLKDMTVRVKVQQGQKVTYRPGW 94
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE+KA+ +S K L+P+ IR A+ A +T+ Q F++ V++DWE N + T
Sbjct: 95 DCHGLPIEMKALGSSATKGLTPVQIRDTARRLASKTVKDQMKGFQALAVMSDWE-NRWTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D+++ QL F NL ++ IYR KPVYWS SSRTALAE+ELEY+ +HVSK+ Y++
Sbjct: 154 MDRDFEIRQLRVFQNLVRRGLIYRKHKPVYWSASSRTALAEAELEYRDEHVSKAAYIRFP 213
Query: 185 LNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + + E A L+A IWTTTPW+LPAN+ IA + + YSV V +VA
Sbjct: 214 IVSDLSSISELANFNGKLYAAIWTTTPWTLPANRAIAIHNEIYYSVIQVGSDGYLVASDR 273
Query: 242 VESLKWTFQTDIEVVCD-FPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLVHC 299
VE+++ D +VV D PG L+ + Y + + K ++ A FV++ GTGLVH
Sbjct: 274 VEAMR-EMLPDFQVVVDSIPGSSLKGLEYQNRLRGKSAPSQSIIEADFVTADSGTGLVHI 332
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLVE 354
AP HGQDD+ I I + G ++ +A P +IL G VL LV
Sbjct: 333 APGHGQDDYEACSKLGIEAFAPIDDGGHFTEEAYPDDPEKLTSAPSILDGGSQAVLDLVN 392
Query: 355 PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
DVL T +H YPYDWRTK+PV+ +A+ QWF D IK +AL
Sbjct: 393 DDVLGTHKLRHKYPYDWRTKRPVVTRATAQWFADVGSIKEDALAA 437
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Query: 1127 NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALAC 1186
+IL G VL LV DVL T +H YPYDWRTK+PV+ +A+ QWF D IK +ALA
Sbjct: 378 SILDGGSQAVLDLVNDDVLGTHKLRHKYPYDWRTKRPVVTRATAQWFADVGSIKEDALAA 437
Query: 1187 LEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCT 1244
L+ V FVPE + L I R WCISRQR WGVPIP YD G+ ++ E I+H +
Sbjct: 438 LKDVRFVPEGGRVRLESFIKGRSEWCISRQRSWGVPIPALYDESGNAVMTVE-TIEHIIS 496
Query: 1245 LIDEHGPDFWWS 1256
++ E W+S
Sbjct: 497 VMQERTSSAWFS 508
>gi|392957453|ref|ZP_10322976.1| isoleucyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
gi|391876416|gb|EIT85013.1| isoleucyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
Length = 918
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 228/641 (35%), Positives = 338/641 (52%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + + L E D+ +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYH-DKRSASIYVAFPVKEGKGVLQE---DVSIVIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y V + G ++VA+ LVE L + D+ VV GQ L+ I HP+ +RD
Sbjct: 248 PDLDYVVVNADGRKLLVAEALVETLTKELEWKDVSVVAQMKGQELEHIVASHPLY--ERD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 306 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFLVGKRYGLDVLCPVDDRGVMTKEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKPVI +A+ QWF + ++ + L
Sbjct: 365 FYDEANKPITEQLTEAGALLKLSFITHSYPHDWRTKKPVIFRATAQWFASIKGMRDDILQ 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ +V ++P + L + + R WCISRQR WGVPIPVFY DG+ I+ E I H
Sbjct: 425 AIADVKWIPHWGETRLFNMMKDREDWCISRQRAWGVPIPVFYGEDGEAIMTEE-TINHVV 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL ++ N +K DI+D+WFDSG S VL+++
Sbjct: 484 QLFREHGSNIWFEREAKDLLPEGFTSSHSPNGRFSKETDIMDVWFDSGSSHWSVLEERED 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL TSVA+ AP++ V HGFV+D +G KMSKSVGNV+
Sbjct: 544 LTRPADLYLEGSDQYRGWFNSSLSTSVAITGKAPYKTVLSHGFVLDGEGRKMSKSVGNVM 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
K + G D+LR WV++ V +
Sbjct: 604 DP-----------------------------IKVMNQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTMDT 939
+IL + +KIR++LR+LLG LH + S+S +D YM+ +L + + + T
Sbjct: 634 DDILKQVAEVYRKIRNTLRFLLGNLHGFDPAKHSVSYENLGELDQYMIVKLNKLIDRVKT 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+Q+ + F +LS+FY + KD LY + + R + L+ + +
Sbjct: 694 AYDEYQFLSVYTAIHTFCTIDLSSFYMDIAKDTLYIQAEDDPKRRNIQTVLYQALVAITK 753
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
VAPI+ H ++EV+ H+P + + V + Y G A
Sbjct: 754 LVAPILAHTSDEVWQHIPGVEEESVQLSNLPVAVSYDGEEA 794
Score = 303 bits (775), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/387 (43%), Positives = 231/387 (59%), Gaps = 13/387 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
G+P FILHDGPPYANG H+GHA NKILKD+ +R + G YVPGWD HGLPIE
Sbjct: 45 KGRPTFILHDGPPYANGDIHVGHAENKILKDMIVRYKSMAGFHAPYVPGWDTHGLPIETA 104
Query: 76 AITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKN 132
S K K +S + RK+ + +AL ++ Q+ +F+ GV DWE N Y T DK +
Sbjct: 105 LTKSGKVKRKEMSVAEFRKRCEEYALTQVDRQRTQFKRLGVRGDWE-NPYITLDKSFEAR 163
Query: 133 QLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL 192
Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EY D S SIY+ + + L
Sbjct: 164 QIEVFGEMVKKGYIYKGLKPVYWSPSSESALAEAEIEYH-DKRSASIYVAFPVKEGKGVL 222
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQ-T 251
E D+ +IWTTTPW++PAN I+ +P L+Y V + G ++VA+ LVE+L +
Sbjct: 223 QE---DVSIVIWTTTPWTIPANLGISVHPDLDYVVVNADGRKLLVAEALVETLTKELEWK 279
Query: 252 DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 311
D+ VV GQ L+ I HP+ +RD ++ V++ GTG VH AP HG+DDFL+
Sbjct: 280 DVSVVAQMKGQELEHIVASHPLY--ERDSLVMLGDHVTTDAGTGCVHTAPGHGEDDFLVG 337
Query: 312 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYD 370
+ VL + ++G + +A PG EGL K L E L ++ HSYP+D
Sbjct: 338 KRYGLDVLCPVDDRGVMTKEA-PGFEGLFYDEANKPITEQLTEAGALLKLSFITHSYPHD 396
Query: 371 WRTKKPVILKASQQWFIDTERIKPEAL 397
WRTKKPVI +A+ QWF + ++ + L
Sbjct: 397 WRTKKPVIFRATAQWFASIKGMRDDIL 423
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 348 VDDRGVMTKEA-PGFEGLFYDEANKPITEQLTEAGALLKLSFITHSYPHDWRTKKPVIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + ++ + L + V ++P + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKGMRDDILQAIADVKWIPHWGETRLFNMMKDREDWCISRQRAWGVPIPVFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
DG+ I+ E I H L EHG + W+ + LL
Sbjct: 467 GEDGEAIMTEE-TINHVVQLFREHGSNIWFEREAKDLL 503
>gi|421526558|ref|ZP_15973165.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum ChDC F128]
gi|402257115|gb|EJU07590.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum ChDC F128]
Length = 933
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 342/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAFVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK LVE+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLVESAFKDIGIENAELLKEFKGKELEYTTYQHPFL--ERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ L+ K+PV++ I ++G + +AG +GL
Sbjct: 313 GLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLSYKLPVVSPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++E+NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDEINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W S E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICDLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLHRPCDLYLEGSDQHRGWFHTSLLTSVASTEDSPYKSVLTHGFVNDGEGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPEDV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L + +
Sbjct: 643 RISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAVDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ LP+
Sbjct: 763 LTKMVAPILSFTAEEIWESLPA 784
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 237/381 (62%), Gaps = 11/381 (2%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
NG+ FILHDGPPYANG HIGHA+NKILKDI ++ +G R YVPGWD HGLPIEL+
Sbjct: 49 NGET-FILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGYRSPYVPGWDTHGLPIELQ 107
Query: 76 AIT----SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ K + +S L+IRK + +A + + QK +F GVL DW+ N Y T D +
Sbjct: 108 VVKEVGLGKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
QL F +Y++ YI++ LKPVYWSP++ TALAE+E+EY DH S SIY++++ N+
Sbjct: 167 KQLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEIEYY-DHTSPSIYVRMQANKDLLD 225
Query: 192 LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQ 250
+ D LIWTTTPW+LPAN I N +Y + + N+I+AK LVES K
Sbjct: 226 KIGFNEDAFVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLVESAFKDIGI 285
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
+ E++ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++
Sbjct: 286 ENAELLKEFKGKELEYTTYQHPFL--ERTGLVILGDHVTADAGTGAVHTAPGHGQDDYVV 343
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPY 369
L+ K+PV++ I ++G + +AG +GL K + HL E +L + HSYP+
Sbjct: 344 GLSYKLPVVSPIDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEISHSYPH 403
Query: 370 DWRTKKPVILKASQQWFIDTE 390
DWR+K PVI +A++QWFI E
Sbjct: 404 DWRSKTPVIFRATEQWFIRME 424
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKVIDEINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICDLVREHGSNIWVEKSPEELI 514
>gi|343428996|emb|CBQ72570.1| probable ISM1-isoleucine--tRNA ligase, mitochondrial [Sporisorium
reilianum SRZ2]
Length = 1089
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/673 (34%), Positives = 351/673 (52%), Gaps = 102/673 (15%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-------ATDLHALIWTTTPWSLPA 470
TALAESELEY+ DH+SK++Y+ KL + LL A DLHA+IWTTTPWSLP+
Sbjct: 274 TALAESELEYREDHLSKAVYVAFKLT-AGSKLLRKLGENTAVAQDLHAIIWTTTPWSLPS 332
Query: 471 NQFIAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQT--------------DIDVV 513
N I NP L+YS+ G+ IV VE L+ + ++ +
Sbjct: 333 NMAINVNPDLDYSIVRRSGSEGHFYIVGNDRVEALESLPSSLSDEQGAESTQKLGPLEEI 392
Query: 514 CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLL----A 568
G L D Y P++ + +L A +V++ GTGLVH APAHG +D+ +
Sbjct: 393 VRIRGTDLSDSVYRSPLSAPNSSARPILMADYVTALSGTGLVHSAPAHGAEDYQIWKQQG 452
Query: 569 LAEKIPVLNLITNQGKYSPDA------------------GPGLEGLNILGDGKDQVLHLV 610
++ + + + ++G+YS D G L G +LG+G +V+ ++
Sbjct: 453 RLQRDGIYSPVNDEGRYSSDILQLDQSSADDGSSNEQGLGHRLVGKEVLGEGAQEVMAIL 512
Query: 611 EPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAK 668
+ ++ + +H YPYDWR+K+PVI++A+ QWF + + IK +A+ L++V FVP +++
Sbjct: 513 KERGALVSAQTLRHKYPYDWRSKQPVIVRATAQWFANLDDIKQQAIQALDDVTFVPANSR 572
Query: 669 KTLRDQIAQRPYWCISRQRVWGVPIPVFYDG--DTIIVNEANIKHFCTLIDEHGPDFWWS 726
L I R WCISRQRVWGVPIPV YD D ++ NI+H +++++ G D+WW
Sbjct: 573 ARLESFILGRSEWCISRQRVWGVPIPVLYDAATDEPLMTVENIEHIASVLEKQGTDYWWK 632
Query: 727 LSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSHVLKDK---------------PAH 769
E + T K D +D+WFDSG SW+ LKD+ A
Sbjct: 633 ADAEVFVAPQYREEGRTWRKGEDTVDVWFDSGTSWA-TLKDQLALESNADPSSRQNGIAD 691
Query: 770 VYMEGMDQINGWFMSSLLTSVAL-----KHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
VY+EG DQ GWF SSL+T+VA K AP++ V HG+V+D + KMSKS+GNV+S
Sbjct: 692 VYLEGSDQHRGWFQSSLITAVATTPEGQKPVAPYKTVVTHGYVLDNESRKMSKSLGNVVS 751
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPTVPIG 883
I QG K GA + PAYG+DVLR WVA + + DP PIG
Sbjct: 752 PLSIIQGGK--------------------GADE-PAYGIDVLRLWVARSDFTTDP--PIG 788
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSEST---GSISRYVDVYMLKRLCEFQNTMDTL 940
I++ + + ++K+R++ R++L + + S R +D ++++ L + +
Sbjct: 789 NVIIHKTAETLRKLRNTARFMLANVPASGQVATLDKSKMRLLDRFVMQELYQLERACAAS 848
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y + +A+ R L F LS Y + KD LY D ++ E R + + I +
Sbjct: 849 YEAYDFAQVVRRLTEFTNGTLSNLYLDVGKDSLYLDLLDNERRRMMVAVIDQILRTMTGI 908
Query: 1001 VAPIMPHLAEEVY 1013
+API+P L EEV+
Sbjct: 909 MAPIVPFLCEEVF 921
Score = 336 bits (862), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 185/450 (41%), Positives = 263/450 (58%), Gaps = 57/450 (12%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
CG ELY WQR + EF+ HDGPPYANG H GHA+NKILKDIT R +L+GKRVHY
Sbjct: 112 CG--ELYQWQRARSDASGEFVFHDGPPYANGNLHCGHALNKILKDITNRYQVLRGKRVHY 169
Query: 62 VPGWDCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+PGWDCHGLPIE KA+ S + L P +IRK+A + A++ I TQK+EF +G++ADW
Sbjct: 170 MPGWDCHGLPIEAKALASMSADQRHALDPREIRKRAHDEAVKAIETQKSEFSQFGIMADW 229
Query: 118 EHNC-YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVS 176
++ Y T D Y QL F + ++ IYR +PVYWSPS+RTALAESELEY+ DH+S
Sbjct: 230 SNDATYRTLDPGYEARQLRVFGEMVRKGLIYRQYRPVYWSPSNRTALAESELEYREDHLS 289
Query: 177 KSIYLKIKLNQVPAHLLEG-------ATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS 229
K++Y+ KL + LL A DLHA+IWTTTPWSLP+N I NP L+YS+
Sbjct: 290 KAVYVAFKLT-AGSKLLRKLGENTAVAQDLHAIIWTTTPWSLPSNMAINVNPDLDYSIVR 348
Query: 230 VKGAN---VIVAKCLVESLKWTFQT--------------DIEVVCDFPGQYLQDITYIHP 272
G+ IV VE+L+ + +E + G L D Y P
Sbjct: 349 RSGSEGHFYIVGNDRVEALESLPSSLSDEQGAESTQKLGPLEEIVRIRGTDLSDSVYRSP 408
Query: 273 INKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLL----ALAEKIPVLNLITNQGK 327
++ + +L A +V++ GTGLVH APAHG +D+ + ++ + + + ++G+
Sbjct: 409 LSAPNSSARPILMADYVTALSGTGLVHSAPAHGAEDYQIWKQQGRLQRDGIYSPVNDEGR 468
Query: 328 YSPDA------------------GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSY 367
YS D G L G +LG+G +V+ +++ ++ + +H Y
Sbjct: 469 YSSDILQLDQSSADDGSSNEQGLGHRLVGKEVLGEGAQEVMAILKERGALVSAQTLRHKY 528
Query: 368 PYDWRTKKPVILKASQQWFIDTERIKPEAL 397
PYDWR+K+PVI++A+ QWF + + IK +A+
Sbjct: 529 PYDWRSKQPVIVRATAQWFANLDDIKQQAI 558
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 22/174 (12%)
Query: 1109 ITNQGKYSPDA------------------GPGLEGLNILGEGKDQVLHLVEPD--VLWTE 1148
+ ++G+YS D G L G +LGEG +V+ +++ ++ +
Sbjct: 463 VNDEGRYSSDILQLDQSSADDGSSNEQGLGHRLVGKEVLGEGAQEVMAILKERGALVSAQ 522
Query: 1149 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQR 1208
+H YPYDWR+K+PVI++A+ QWF + + IK +A+ L+ V FVP +++ L I R
Sbjct: 523 TLRHKYPYDWRSKQPVIVRATAQWFANLDDIKQQAIQALDDVTFVPANSRARLESFILGR 582
Query: 1209 PYWCISRQRVWGVPIPVFYDG--DTIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
WCISRQRVWGVPIPV YD D ++ NI+H +++++ G D+WW E
Sbjct: 583 SEWCISRQRVWGVPIPVLYDAATDEPLMTVENIEHIASVLEKQGTDYWWKADAE 636
>gi|256846630|ref|ZP_05552086.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|294784339|ref|ZP_06749630.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
gi|256717850|gb|EEU31407.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|294487911|gb|EFG35266.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
Length = 933
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/624 (34%), Positives = 345/624 (55%), Gaps = 58/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH+S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ L KI V++ I ++G + +AG +GL
Sbjct: 313 GLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKISVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L T+ HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 FYSDANKAIIKHLTETGHILKTQEISHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLL--------NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
C L+ E+G + W S E+L+ N D+ + K +I+D+WFDSG S VL
Sbjct: 493 ICDLVRENGSNIWVEKSPEELIGEELLVKYNLKDLK--LRKETNIMDVWFDSGSSHRGVL 550
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS
Sbjct: 551 EVWKGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKS 610
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN +S D+ + YG D+LR W + +D
Sbjct: 611 LGNTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD- 640
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQ 934
V I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L +
Sbjct: 641 DVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLK 700
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
++ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 701 RSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKEDSVARRAAQTVMYEVL 760
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ LP+
Sbjct: 761 MTLTKMVAPILSFTAEEIWESLPA 784
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/381 (44%), Positives = 237/381 (62%), Gaps = 11/381 (2%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
NG+ FILHDGPPYANG HIGHA+NKILKDI L+ +G R YVPGWD HGLPIEL+
Sbjct: 49 NGET-FILHDGPPYANGNTHIGHALNKILKDIILKYKTFRGFRSPYVPGWDTHGLPIELQ 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ +K + +S L+IR+ + +A + + QK +F GVL DW+ N Y T D +
Sbjct: 108 VVKEVGVAKAREMSALEIRQLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
QL F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DHVS SIY++++ N+
Sbjct: 167 KQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHVSPSIYVRMQANKDLLD 225
Query: 192 LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQ 250
+ D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K
Sbjct: 226 KIGFNEDAYVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKDIGI 285
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
+ E++ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++
Sbjct: 286 ENFELIKEFKGKDLEYTTYKHPF--LERTGLVILGDHVTADAGTGAVHTAPGHGQDDYVV 343
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPY 369
L KI V++ I ++G + +AG +GL K + HL E +L T+ HSYP+
Sbjct: 344 GLNYKISVISPIDHRGCLTEEAGDLFKGLFYSDANKAIIKHLTETGHILKTQEISHSYPH 403
Query: 370 DWRTKKPVILKASQQWFIDTE 390
DWR+K PVI +A++QWFI E
Sbjct: 404 DWRSKTPVIFRATEQWFIRME 424
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + HL E +L T+ HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLFYSDANKAIIKHLTETGHILKTQEISHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ E+G + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICDLVRENGSNIWVEKSPEELI 514
>gi|410458069|ref|ZP_11311833.1| isoleucyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
gi|409931894|gb|EKN68868.1| isoleucyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
Length = 921
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/619 (36%), Positives = 328/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ ++ L A D +IWTTTPW++PAN I +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFQVKDGNGVL---AGDEKIIIWTTTPWTIPANLGICVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV V G ++A L+E++ T + ++ VV G L+++ HP +RD
Sbjct: 248 PELEYSVVEVDGEKYVLASALLESVSKTIEWENVKVVKTVKGAELENVVARHPFY--ERD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VLN + ++G ++ A PG EGL
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLDVLNPVDDKGYFTSQA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 365 FYDDANKVVSEKLQEVGALLKLTFITHSYPHDWRTKKPVIFRATAQWFASIKDFREQLLQ 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++EV +VP + L + I R WCISRQR WGVPIPVFY DG+ II +E I H
Sbjct: 425 AIKEVKWVPAWGETRLFNMIKDREDWCISRQRAWGVPIPVFYGEDGEPIITDE-TIAHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N TK DI+D+WFDSG S VL ++
Sbjct: 484 NLFREHGSNVWFEREAKDLLPEGFTSPHSPNGKFTKETDIMDVWFDSGSSHQAVLVEREE 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T VA+ AP++ + HGF +D +G KMSKS+GN I
Sbjct: 544 LQRPADLYLEGSDQYRGWFNSSLSTGVAVTGKAPYKGILSHGFALDGEGRKMSKSLGNTI 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ K + G D+LR WVA+ V +
Sbjct: 604 IPN-----------------------------KVMDQLGADILRLWVAS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG L + + +S R VDVY+L +L + + + T
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLLGNLSDFDPAVDKVSLNDLREVDVYILVKLNKVIDKVLT 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF ELS+FY + KD +Y ++ N + R S L+ L +
Sbjct: 694 SYENYDFAGIYHAVNNFCTIELSSFYLDVAKDVIYIEAANSKNRRSIQTVLYETLLALTK 753
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH AEEV+ ++P
Sbjct: 754 LVTPILPHTAEEVWEYIPG 772
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 232/396 (58%), Gaps = 13/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y ++ G+P F+LHDGPPYANG H+GHA+NKILKD+ +R + G YVPGWD
Sbjct: 36 IYKMVQKRTEGRPLFVLHDGPPYANGDIHMGHALNKILKDMIVRFKSMSGYHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +K K +S + RK + +A E ++ Q+ +F+ GV DWE N Y
Sbjct: 96 THGLPIETALTKNKKVDRKKMSVAEFRKLCEEYAYEQVDCQREQFKRLGVRGDWE-NPYI 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T K Y Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 155 TLTKGYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSASIYVAF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
++ L A D +IWTTTPW++PAN I +P LEYSV V G ++A L+E
Sbjct: 214 QVKDGNGVL---AGDEKIIIWTTTPWTIPANLGICVHPELEYSVVEVDGEKYVLASALLE 270
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ T + +++VV G L+++ HP +RD ++ V++ GTG VH AP
Sbjct: 271 SVSKTIEWENVKVVKTVKGAELENVVARHPFY--ERDSLVMLGEHVTTDAGTGCVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VLN + ++G ++ A PG EGL K L E L
Sbjct: 329 HGEDDFLVGKKYGLDVLNPVDDKGYFTSQA-PGFEGLFYDDANKVVSEKLQEVGALLKLT 387
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 388 FITHSYPHDWRTKKPVIFRATAQWFASIKDFREQLL 423
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
LN + ++G ++ A PG EGL K L E L + HSYP+DWRTKKPV
Sbjct: 345 LNPVDDKGYFTSQA-PGFEGLFYDDANKVVSEKLQEVGALLKLTFITHSYPHDWRTKKPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF + + + L ++ V +VP + L + I R WCISRQR WGVPIP
Sbjct: 404 IFRATAQWFASIKDFREQLLQAIKEVKWVPAWGETRLFNMIKDREDWCISRQRAWGVPIP 463
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY DG+ II +E I H L EHG + W+ + LL
Sbjct: 464 VFYGEDGEPIITDE-TIAHVSNLFREHGSNVWFEREAKDLL 503
Score = 43.5 bits (101), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 1024 SSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV 1083
++FC ++ Y +AK ++Y ++ N + R S L+ L + V PI+PH AEEV
Sbjct: 708 NNFCTIELSSFYL-DVAKDVIYIEAANSKNRRSIQTVLYETLLALTKLVTPILPHTAEEV 766
Query: 1084 YSHLPS 1089
+ ++P
Sbjct: 767 WEYIPG 772
>gi|326476748|gb|EGE00758.1| isoleucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
gi|326484807|gb|EGE08817.1| isoleucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 1012
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 343/648 (52%), Gaps = 49/648 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQF 473
TALAE+ELEYK DHIS + +K L+ +P+ +LE D+ A+IWTTTPW+LPAN
Sbjct: 204 TALAEAELEYKEDHISTAALVKFVLDNLPSQVLEHPLLAGNDISAVIWTTTPWTLPANAA 263
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITY-IHPI 530
+A NP EY++ S + ++VA+ ++ L+ + D VV G L + TY H
Sbjct: 264 LAVNPDFEYTIVDSTRHGKLLVAQSRLQYLQELLEDDFTVVIPAIMGSELLNSTYRSHFK 323
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
E +++ A FV++ G+G+VHCAP HG +D+ + LA IP + +G+++ A
Sbjct: 324 GPESEKQRVIAADFVTADAGSGIVHCAPGHGMEDYEVCLALGIPAYAPVDGEGRFTQSAM 383
Query: 591 PG----LEGLNILGDGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI 644
P L G +LGDG V+ +L E +L ++ Y+H YPYDWR+K PVI++A++QWF
Sbjct: 384 PTKPDLLTGKAVLGDGNHAVIKYLSEKGILIHKHAYKHKYPYDWRSKLPVIIRATEQWFA 443
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGDT 701
D I+ EA+ L+ V F+P + K L + R WCISRQR WGVPIP Y G+
Sbjct: 444 DVGDIRGEAIQALQSVQFIPPTGKSRLETFVRNRSEWCISRQRAWGVPIPALYHRTTGEA 503
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSV--EQLLNTSDVNSN---VTKSNDILDIWFDSG 756
I+ E+ + H +I+E G D WW+ + L S +S+ + D +D+WFDSG
Sbjct: 504 ILTKES-VSHIIKMIEERGIDAWWTDDEFDQAWLPASLRDSSSPQYKRGTDTMDVWFDSG 562
Query: 757 ISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALK--------HTAPFRNVFLH 804
SW+ + D PA VY+EG DQ GWF SSLLT ++ + APF+ + H
Sbjct: 563 TSWAQLKDDSHENPPADVYLEGSDQHRGWFQSSLLTYISHQLAEGGKSSFKAPFKTLITH 622
Query: 805 GFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY--- 861
GF +D+ G KMSKS+GN I +I G P K + + +P Y
Sbjct: 623 GFTLDQYGRKMSKSIGNTIQPDEIMGGTLLPPLKPKKIKGKGPKPN-----PDIPVYDAL 677
Query: 862 GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN---HSESTGSI 918
G D LR W AA + V IG+ +L + + K R + + LLG L + +E
Sbjct: 678 GPDALRLW-AAGSDYTKDVIIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYES 736
Query: 919 SRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSI 978
+D L +L T + ++ +A + + E SAFY +KDRLY DS
Sbjct: 737 LHAIDKISLVQLHNLVKTSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSE 796
Query: 979 NGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+G +R + TL +I+ + + PI+P L EE + H P G+ F
Sbjct: 797 SGISRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP---GSIKGF 841
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/413 (44%), Positives = 257/413 (62%), Gaps = 22/413 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LYSWQ+ F LHDGPPYANG HIGHA+NKILKDI R L +GKRVHYVPGW
Sbjct: 42 DLYSWQQRNRPATATFTLHDGPPYANGDLHIGHALNKILKDIICRVQLAKGKRVHYVPGW 101
Query: 66 DCHGLPIELKAITSKDKL----LSPLD----IRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ + +L L+ D IR A+ A +T++ Q F +W ++ DW
Sbjct: 102 DCHGLPIELKALQGQKELGDLRLAGRDGAAQIRSAARQLAEKTVSQQMEGFRNWAIMGDW 161
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+ N Y T +K++ + QL F + ++ IYR KPVYWSPSS TALAE+ELEYK DH+S
Sbjct: 162 D-NAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSSTALAEAELEYKEDHIST 220
Query: 178 SIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKG 232
+ +K L+ +P+ +LE D+ A+IWTTTPW+LPAN +A NP EY++ S +
Sbjct: 221 AALVKFVLDNLPSQVLEHPLLAGNDISAVIWTTTPWTLPANAALAVNPDFEYTIVDSTRH 280
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVC-DFPGQYLQDITY-IHPINKEQRDLKLLPAGFVSS 290
++VA+ ++ L+ + D VV G L + TY H E +++ A FV++
Sbjct: 281 GKLLVAQSRLQYLQELLEDDFTVVIPAIMGSELLNSTYRSHFKGPESEKQRVIAADFVTA 340
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGK 346
G+G+VHCAP HG +D+ + LA IP + +G+++ A P L G +LGDG
Sbjct: 341 DAGSGIVHCAPGHGMEDYEVCLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKAVLGDGN 400
Query: 347 DQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ +L E +L ++ Y+H YPYDWR+K PVI++A++QWF D I+ EA+
Sbjct: 401 HAVIKYLSEKGILIHKHAYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAI 453
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKK 1162
+ +G+++ A P L G +LG+G V+ +L E +L ++ Y+H YPYDWR+K
Sbjct: 372 VDGEGRFTQSAMPTKPDLLTGKAVLGDGNHAVIKYLSEKGILIHKHAYKHKYPYDWRSKL 431
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ EA+ L+ V F+P + K L + R WCISRQR WGVP
Sbjct: 432 PVIIRATEQWFADVGDIRGEAIQALQSVQFIPPTGKSRLETFVRNRSEWCISRQRAWGVP 491
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ I+ E+ + H +I+E G D WW+
Sbjct: 492 IPALYHRTTGEAILTKES-VSHIIKMIEERGIDAWWT 527
>gi|15673845|ref|NP_268020.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|81537525|sp|Q9CEH8.1|SYI_LACLA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|12724895|gb|AAK05961.1|AE006416_6 isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
Length = 932
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/644 (35%), Positives = 342/644 (53%), Gaps = 66/644 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K L E D+ +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAH 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV +V G ++A + + E L+W + +V+ G L+ + HP
Sbjct: 247 PDYDYSVVAVNGRKFVIASEMLEAVAEKLEWE---NPEVLQTIKGSELEYMVAKHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ A +V+ GTGLVH AP HG+DD+ + K+PVL+ I N+G Y+ D PGL
Sbjct: 302 DRETLIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLH--LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EGL L D ++V+ L E D L E + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGL--LYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E V++V K L + + R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVERVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPLPIFYGENGEPIITPETT 478
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
+H L E G W+ + LL + + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 -EHVAKLFAEFGSKVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDSGSSWNGVL 537
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
++ PA +Y+EG DQ GWF SS+ TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 538 NERDYLSFPADLYLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFVLDGKGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+T+ +G D+LR WVA+ +
Sbjct: 598 IGNTIVPKDVTK-----------------------------KFGADILRLWVAS-IDTES 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + +IL+ + +KIR++LR+L+ + + +I R VD YML + E
Sbjct: 628 DVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVKFNELV 687
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ T Y + + + ++NF+ N+LS+FY KD +Y ++ N R S ++ I
Sbjct: 688 KQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYVIL 747
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L++ + PI+PH AEE +++L F+ + GS
Sbjct: 748 KDLVKILVPILPHTAEETWTYLEHEPENFAYLAEMPEAAEIPGS 791
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/397 (42%), Positives = 242/397 (60%), Gaps = 16/397 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY ++E GKP F+LHDGPPYANG H+GH++NKI KDI +R + G R YVPGWD
Sbjct: 36 LYEKRQELNEGKPSFMLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K K + LD ++ + +A++ ++ Q+++F+S GVLADW+ Y T
Sbjct: 96 THGLPIEQQLAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDR-PYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++ K
Sbjct: 155 LLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVAFK 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
L E D+ +IWTTTPW++P+N I +P +YSV +V G ++A ++E+
Sbjct: 214 AKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPDYDYSVVAVNGRKFVIASEMLEA 270
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+ + + EV+ G L+ + HP R+ ++ A +V+ GTGLVH AP H
Sbjct: 271 VAEKLEWENPEVLQTIKGSELEYMVAKHPFY--DRETLIMNADYVTLDSGTGLVHVAPGH 328
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLWT- 360
G+DD+ + K+PVL+ I N+G Y+ D PGLEGL L D ++V+ L E D L
Sbjct: 329 GEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGLEGL--LYDEGNKVVSKWLEEKDALLKL 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 386 EFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNIL 422
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKP 1163
L+ I N+G Y+ D PGLEGL + EG V L E D L E + HSYP+DWRTKKP
Sbjct: 344 LSPIDNRGYYT-DEAPGLEGL-LYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L +E V++V K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRQNILDEVERVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E +H L E G W+ + LL
Sbjct: 462 PIFYGENGEPIITPETT-EHVAKLFAEFGSKVWFEREAKDLL 502
>gi|310790083|gb|EFQ25616.1| isoleucyl-tRNA synthetase [Glomerella graminicola M1.001]
Length = 947
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/624 (35%), Positives = 332/624 (53%), Gaps = 47/624 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT-DLHALIWTTTPWSLPANQFIAF 476
TALAE+ELEY +H+S + Y++ + P+ L G + L+A+IWTTTPW+LPAN+ IA
Sbjct: 189 TALAEAELEYNENHVSTAAYVRYPITGGPS--LSGVSGQLYAIIWTTTPWTLPANKAIAV 246
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQTDID--VVCDFPGQYLQDITYIHPINKEQ 534
+ L+Y+V S KGA+ + A +E +K F + VV G L+ + Y + + Q
Sbjct: 247 HEDLDYAVVSAKGASYLTAVSRLEAVKALFPEEEPQVVVSSIKGSELKGLKYHNRLQGVQ 306
Query: 535 RDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG- 592
+ ++ A FVS+ GTGLVH AP HG +D+ I I ++G ++ +A P
Sbjct: 307 SAPQPVIHADFVSADSGTGLVHIAPGHGFEDYEACAQLGIDAFAPIDDEGNFTREAFPDA 366
Query: 593 ----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
E +IL G VL L++ DVL Y+H YPYDWRTK+PV+++++ QWF D +
Sbjct: 367 PEKLTEASSILKGGSKAVLALIQDDVLSAAKYKHKYPYDWRTKQPVVMRSTAQWFADVDS 426
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
IK +A+ L++V FVP S + L + R WCISRQR WGVPIP Y DGD ++ E
Sbjct: 427 IKDDAVDALKDVKFVPASGRNRLESFVVGRSEWCISRQRAWGVPIPALYNADGDAVVTEE 486
Query: 707 ANIKHFCTLIDEHGPDFWWSLSV-EQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
++ H ++I + G D W+S + E + + D +D+WFDSG SW+ +
Sbjct: 487 -SVSHIISVIQQRGIDAWFSDAPDEPAWVAPSLKGQFRRGTDTMDVWFDSGSSWTE--SN 543
Query: 766 KPAHVYMEGMDQINGWFMSSLLTSVALKHT-----------APFRNVFLHGFVVDEKGAK 814
A VY+EG DQ GWF SSLL+ VA + +PF + HGF +D+ G K
Sbjct: 544 GQADVYLEGSDQHRGWFQSSLLSYVAAQRAESDGATRVQPKSPFNTLITHGFTLDQAGKK 603
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS+GN I+ I G P + V A + A G D LR WVA+
Sbjct: 604 MSKSIGNTITPAQIMDGTLLPPIKVRGKAKVAGAGPTYE------ALGPDALRLWVASSE 657
Query: 875 -SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEF 933
+KD V +G+ +L S + K R+ ++ L G +H + + + + +D L +L +
Sbjct: 658 YTKD--VAVGQAVLKSVHTILVKYRTIIKMLTGSMHESARTAPTTA--LDHIALMQLKDV 713
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + ++ +A L +V N+LSAFY +KDRLYC G L I
Sbjct: 714 TEEVHQAFAAHEFYKAFNALNRWVANDLSAFYLEAMKDRLYCGDGGG--------VLEPI 765
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLP 1017
F LR ++P+ P L EE + H P
Sbjct: 766 FLGFLRMLSPMTPLLVEEAWDHRP 789
Score = 323 bits (827), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 245/402 (60%), Gaps = 14/402 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+ Y WQ +P F LHDGPPYANG H+GHA+NKILKD+ R + QG RV Y PGW
Sbjct: 35 DFYQWQLSN-ESRPAFSLHDGPPYANGGLHVGHALNKILKDMINRVKVQQGYRVRYRPGW 93
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE+KA+ S K L+ +IRK A+ A T+ Q F S+GV+ DW+ + T
Sbjct: 94 DCHGLPIEMKAVGASGGKGLTATEIRKAARQLASATVLEQMDGFRSYGVMGDWDAR-WTT 152
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D ++ QL F + ++ IYR KPVYWSPSSRTALAE+ELEY +HVS + Y++
Sbjct: 153 MDPDFEIRQLRLFQQMVRRGLIYRKSKPVYWSPSSRTALAEAELEYNENHVSTAAYVRYP 212
Query: 185 LNQVPAHLLEGAT-DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ P+ L G + L+A+IWTTTPW+LPAN+ IA + L+Y+V S KGA+ + A +E
Sbjct: 213 ITGGPS--LSGVSGQLYAIIWTTTPWTLPANKAIAVHEDLDYAVVSAKGASYLTAVSRLE 270
Query: 244 SLKWTFQTDIE--VVCDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCA 300
++K F + VV G L+ + Y + + Q + ++ A FVS+ GTGLVH A
Sbjct: 271 AVKALFPEEEPQVVVSSIKGSELKGLKYHNRLQGVQSAPQPVIHADFVSADSGTGLVHIA 330
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLVEP 355
P HG +D+ I I ++G ++ +A P E +IL G VL L++
Sbjct: 331 PGHGFEDYEACAQLGIDAFAPIDDEGNFTREAFPDAPEKLTEASSILKGGSKAVLALIQD 390
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
DVL Y+H YPYDWRTK+PV+++++ QWF D + IK +A+
Sbjct: 391 DVLSAAKYKHKYPYDWRTKQPVVMRSTAQWFADVDSIKDDAV 432
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Query: 1109 ITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
I ++G ++ +A P E +IL G VL L++ DVL Y+H YPYDWRTK+P
Sbjct: 352 IDDEGNFTREAFPDAPEKLTEASSILKGGSKAVLALIQDDVLSAAKYKHKYPYDWRTKQP 411
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+++++ QWF D + IK +A+ L+ V FVP S + L + R WCISRQR WGVPI
Sbjct: 412 VVMRSTAQWFADVDSIKDDAVDALKDVKFVPASGRNRLESFVVGRSEWCISRQRAWGVPI 471
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
P Y DGD ++ E ++ H ++I + G D W+S
Sbjct: 472 PALYNADGDAVVTEE-SVSHIISVIQQRGIDAWFS 505
>gi|296818499|ref|XP_002849586.1| isoleucyl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238840039|gb|EEQ29701.1| isoleucyl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 1517
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/643 (36%), Positives = 341/643 (53%), Gaps = 52/643 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DH+S + +K L +PA + E + +D+ A+IWTTTPW+LPAN
Sbjct: 709 GTALAEAELEYKEDHVSTAALVKFALENLPARIRENSLLSNSDISAVIWTTTPWTLPANA 768
Query: 473 FIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYI-HP 529
+A +P LEY++ S ++VA+ ++ L+ ++ V+ G L D TY H
Sbjct: 769 ALAVSPTLEYTIVDSAHHGKLLVAQSRLQYLQELLDDNLKVIVPAILGSELLDSTYRPHF 828
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
E +++ A FV++ G+G+VHCAP HG +D+ LA IP + +G+++
Sbjct: 829 KGPEAESQRIIAADFVTADAGSGIVHCAPGHGMEDYETCLALGIPAYAPVDGEGRFTQAT 888
Query: 590 GPG----LEGLNILGDGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWF 643
P L G +LGDG V+ +L E +L ++ Y+H YPYDWR+K PVI++A++QWF
Sbjct: 889 MPTQPDLLTGKAVLGDGNIAVIKYLSEKGILMHKHAYKHKYPYDWRSKLPVIIRATEQWF 948
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGD 700
D I+ EA+ L+ V F+P S K L + R WCISRQR WGVPIP Y G+
Sbjct: 949 ADVGDIRGEAIQALQSVQFIPPSGKSRLETFVKNRSEWCISRQRAWGVPIPALYHRTTGE 1008
Query: 701 TIIVNEANIKHFCTLIDEHGPDFWWSLSV-------EQLLNTSDVNSNVTKSNDILDIWF 753
I+ E+ + H +I+E G D WW+ L N+S + + D +D+WF
Sbjct: 1009 AILTKES-VSHIMKIIEERGIDAWWTDDEFDQAWFPPSLRNSS--SPQYKRGTDTMDVWF 1065
Query: 754 DSGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHT--------APFRNV 801
DSG SW+ + D PA VY+EG DQ GWF SSLLT ++ + + APF+ +
Sbjct: 1066 DSGTSWAQLKDDSPDKAPADVYLEGSDQHRGWFQSSLLTYISHQLSQGGNSGFKAPFKTL 1125
Query: 802 FLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY 861
HGF +D+ G KMSKS+GN I +I G P K V ++ ++P Y
Sbjct: 1126 ITHGFTLDQHGRKMSKSIGNTIQPDEIMGGTLLSPLKPKKVKGKGPKPNL-----EVPIY 1180
Query: 862 ---GVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN---HSES 914
G D LR W A +KD V IG+ +L + + K R + + LLG L +E
Sbjct: 1181 DALGPDALRLWAAGSDYTKD--VVIGQQVLKAVNISLHKFRVTFKLLLGALQGFDPKNEV 1238
Query: 915 TGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
+D L +L T + ++ +A + + E SAFY +KDRLY
Sbjct: 1239 PYESLYAIDKIALLQLHNLVKTSQEAIDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLY 1298
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
DS NG +R + TL +I+ + + PI+P L EE + H P
Sbjct: 1299 ADSENGISRRAAQTTLFHIYTHIQTLLGPIVPLLVEETWEHTP 1341
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 178/413 (43%), Positives = 251/413 (60%), Gaps = 22/413 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LYSWQ+ F LHDGPPYANG HIGHA+NKILKDI R L +GKRV YVPGW
Sbjct: 548 DLYSWQQRNRPATASFTLHDGPPYANGELHIGHALNKILKDIICRVQLAKGKRVQYVPGW 607
Query: 66 DCHGLPIELKAITSKDKLL--------SPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ + +L IR A+ A +T++ Q F W ++ DW
Sbjct: 608 DCHGLPIELKALQGQKELGDLRSAGRDGAAQIRSAARQLAEKTVSQQMEGFRKWAIMGDW 667
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+ N Y T +K++ + QL F + ++ IYR KPVYWSPSS TALAE+ELEYK DHVS
Sbjct: 668 D-NAYTTMNKDFERRQLGVFLEMVEKGLIYRRYKPVYWSPSSGTALAEAELEYKEDHVST 726
Query: 178 SIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKG 232
+ +K L +PA + E + +D+ A+IWTTTPW+LPAN +A +P LEY++ S
Sbjct: 727 AALVKFALENLPARIRENSLLSNSDISAVIWTTTPWTLPANAALAVSPTLEYTIVDSAHH 786
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCD-FPGQYLQDITYI-HPINKEQRDLKLLPAGFVSS 290
++VA+ ++ L+ +++V+ G L D TY H E +++ A FV++
Sbjct: 787 GKLLVAQSRLQYLQELLDDNLKVIVPAILGSELLDSTYRPHFKGPEAESQRIIAADFVTA 846
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGK 346
G+G+VHCAP HG +D+ LA IP + +G+++ P L G +LGDG
Sbjct: 847 DAGSGIVHCAPGHGMEDYETCLALGIPAYAPVDGEGRFTQATMPTQPDLLTGKAVLGDGN 906
Query: 347 DQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ +L E +L ++ Y+H YPYDWR+K PVI++A++QWF D I+ EA+
Sbjct: 907 IAVIKYLSEKGILMHKHAYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAI 959
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKK 1162
+ +G+++ P L G +LG+G V+ +L E +L ++ Y+H YPYDWR+K
Sbjct: 878 VDGEGRFTQATMPTQPDLLTGKAVLGDGNIAVIKYLSEKGILMHKHAYKHKYPYDWRSKL 937
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ EA+ L+ V F+P S K L + R WCISRQR WGVP
Sbjct: 938 PVIIRATEQWFADVGDIRGEAIQALQSVQFIPPSGKSRLETFVKNRSEWCISRQRAWGVP 997
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ I+ E+ + H +I+E G D WW+
Sbjct: 998 IPALYHRTTGEAILTKES-VSHIMKIIEERGIDAWWT 1033
>gi|340754220|ref|ZP_08690982.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|422316126|ref|ZP_16397527.1| isoleucyl-tRNA synthetase [Fusobacterium periodonticum D10]
gi|229423745|gb|EEO38792.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|404591495|gb|EKA93629.1| isoleucyl-tRNA synthetase [Fusobacterium periodonticum D10]
Length = 933
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/622 (34%), Positives = 343/622 (55%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH+S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLAESAFKNIGIENAELLKEFKGKDLEYTTYQHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ L K+PV++ I ++G + +AG +GL
Sbjct: 313 GLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++E+NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W + E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKTPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLHRPCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGKKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N ++ D+ + YG D+LR W + +D V
Sbjct: 613 NTVAPSDV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L + +
Sbjct: 643 RISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ I
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEILMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ +LP+
Sbjct: 763 LTKMVAPILSFTAEEIWENLPA 784
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 240/381 (62%), Gaps = 11/381 (2%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
NG+ FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+
Sbjct: 49 NGES-FILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGFKSPYVPGWDTHGLPIELQ 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ +K + +SPL+IRK+ + +A + + QK +F GVL DW+H Y T D +
Sbjct: 108 VVKEVGVAKAREMSPLEIRKRCEEYARKWVGIQKEQFIRLGVLGDWDH-PYLTLDPRFEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
QL F +Y++ YI++ LKPVYWSP++ TALAE+E+EY DHVS SIY++++ N+
Sbjct: 167 KQLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEIEYY-DHVSPSIYVRMQANKDLLD 225
Query: 192 LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQ 250
+ D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K
Sbjct: 226 KIGFNEDAYVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKNIGI 285
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
+ E++ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++
Sbjct: 286 ENAELLKEFKGKDLEYTTYQHPF--LERTGLVILGDHVTADAGTGAVHTAPGHGQDDYVV 343
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPY 369
L K+PV++ I ++G + +AG +GL K + HL E +L + HSYP+
Sbjct: 344 GLNYKLPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEINHSYPH 403
Query: 370 DWRTKKPVILKASQQWFIDTE 390
DWR+K PVI +A++QWFI E
Sbjct: 404 DWRSKTPVIFRATEQWFIRME 424
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKTPEELI 514
>gi|347522215|ref|YP_004779786.1| isoleucyl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
gi|385833600|ref|YP_005871375.1| isoleucyl-tRNA synthetase [Lactococcus garvieae Lg2]
gi|343180783|dbj|BAK59122.1| isoleucyl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
gi|343182753|dbj|BAK61091.1| isoleucyl-tRNA synthetase [Lactococcus garvieae Lg2]
Length = 928
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/643 (34%), Positives = 339/643 (52%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K V L E D+ +IWTTTPW+LPAN I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDVKGRLPE---DVEFVIWTTTPWTLPANMGIFVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P EYSV V ++A ++ E L+W T V+ G + +T HP
Sbjct: 247 PDYEYSVVEVGSRKFVIASEMLSKVAETLEWENPT---VLQTLKGSDMDMMTAHHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ +V+ GTGLVH AP HG+DD+ + K+ VL+ + N+G Y+ D PGL
Sbjct: 302 DRESLIMNGDYVTLDSGTGLVHSAPGHGEDDYFFSRKYKLEVLSPVDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ +G V +E +L + + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGI-FYDEGNKIVSKWLEEKGALLKLDFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRE 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
L+ +E+V+++ K L + + R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 420 NILSEIEQVDWIIPWGKTRLYNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITPETT- 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L EHG W ++LL + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 EHVAQLFAEHGSKVWVEREAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSWNGVLN 538
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SS+ TSVA+ +P++ V GFV+D KG KMSKS+
Sbjct: 539 ERDYLSYPADLYLEGSDQYRGWFNSSITTSVAVNGVSPYKAVLSQGFVLDGKGRKMSKSI 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I D+T KL G D+LR WVA+ +
Sbjct: 599 GNTILPSDVT--------------------------GKL---GADILRLWVAS-VDTEAD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + ILN + +KIR+++R+L+ + ++T ++S R VD YML +
Sbjct: 629 VRVSMEILNQVSEVYRKIRNTMRFLIANTTDFDKNTNAVSYENLRSVDKYMLAKFNTLVK 688
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y + + + ++NF+ N+LSAFY KD +Y ++ N R S ++ +
Sbjct: 689 AVREAYDSYNFMSVYKQVVNFLTNDLSAFYLDFAKDVVYIEAANAADRRSMQTVMYTMLA 748
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L + + PI+PH AEE++S+L + F+ ++GS
Sbjct: 749 DLTKLLVPILPHTAEEIWSYLEAETEEFAYLAEMPEVKDFTGS 791
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/395 (42%), Positives = 235/395 (59%), Gaps = 21/395 (5%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ALN GKP F+LHDGPPYANG H+GHA+NKI KDI +R + G R YVPGWD HGL
Sbjct: 40 RQALNEGKPSFMLHDGPPYANGNIHVGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGL 99
Query: 71 PIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE L K + LD ++ + +AL+ ++ Q+++F+S GVLADWE Y T E
Sbjct: 100 PIEQQLSKAGMNRKEMDMLDYLEECRKYALKQVDMQRSDFKSLGVLADWER-PYMTLLPE 158
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
Y Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++ K V
Sbjct: 159 YEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVAFKAKDV 217
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV----ES 244
L E D+ +IWTTTPW+LPAN I +P EYSV V ++A ++ E+
Sbjct: 218 KGRLPE---DVEFVIWTTTPWTLPANMGIFVHPDYEYSVVEVGSRKFVIASEMLSKVAET 274
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
L+W T V+ G + +T HP R+ ++ +V+ GTGLVH AP HG
Sbjct: 275 LEWENPT---VLQTLKGSDMDMMTAHHPFY--DRESLIMNGDYVTLDSGTGLVHSAPGHG 329
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTEN 362
+DD+ + K+ VL+ + N+G Y+ D PGLEG+ +G V +E +L +
Sbjct: 330 EDDYFFSRKYKLEVLSPVDNRGYYT-DEAPGLEGI-FYDEGNKIVSKWLEEKGALLKLDF 387
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 388 FTHSYPHDWRTKKPVIFRATPQWFASIDDFRENIL 422
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + N+G Y+ D PGLEG+ EG V +E +L + + HSYP+DWRTKKP
Sbjct: 344 LSPVDNRGYYT-DEAPGLEGI-FYDEGNKIVSKWLEEKGALLKLDFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L+ +E V+++ K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRENILSEIEQVDWIIPWGKTRLYNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E +H L EHG W ++LL
Sbjct: 462 PIFYAENGEAIITPETT-EHVAQLFAEHGSKVWVEREAKELL 502
>gi|315041789|ref|XP_003170271.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311345305|gb|EFR04508.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 1012
Score = 372 bits (954), Expect = e-99, Method: Compositional matrix adjust.
Identities = 235/649 (36%), Positives = 345/649 (53%), Gaps = 52/649 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQ 472
GTALAE+ELEYK DHIS + +K L+ +PA + E + D+ A+IWTTTPW+LPAN
Sbjct: 203 GTALAEAELEYKEDHISTAALVKFVLDDLPAQVWENSLLVGNDISAVIWTTTPWTLPANA 262
Query: 473 FIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDF-PGQYLQDITYIH-- 528
+A NP EY++ S + ++VA+ ++ L+ + VV G L + TY
Sbjct: 263 ALAVNPDFEYTIVYSARHGKLLVAQSRLQYLEELLEDHFTVVVPVVMGSELLNSTYRSLF 322
Query: 529 --PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
P +++QR ++ A FV++ G+G+VHCAP HG +D+ LA IP + +G+Y+
Sbjct: 323 KGPESEKQR---IIAADFVTADAGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRYT 379
Query: 587 PDAGPG----LEGLNILGDGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQ 640
A P L G +LGDG V+ +L E +L ++ Y+H YPYDWR+K PVI++A++
Sbjct: 380 RFAMPSQPDLLTGKAVLGDGNHAVIKYLSENGILIHKHAYKHKYPYDWRSKLPVIIRATE 439
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--- 697
QWF D I+ EA+ L+ V F+P S K L + R WCISRQR WGVPIP Y
Sbjct: 440 QWFADVGDIRGEAIQALQSVQFIPPSGKSRLETFVRNRSEWCISRQRAWGVPIPALYHRT 499
Query: 698 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSV--EQLLNTSDVNSN---VTKSNDILDIW 752
G+ ++ E+ + H +I+E G D WW+ ++ L+ S +S+ + D +D+W
Sbjct: 500 TGEAVLTKES-VSHIMKVIEERGIDAWWTDDEFDQEWLHPSLRDSSSPQYKRGTDTMDVW 558
Query: 753 FDSGISWSHVLKD----KPAHVYMEGMDQINGWFMSSLLTSVALK--------HTAPFRN 800
FDSG SW+ + D PA VY+EG DQ GWF SSLLT ++ + APF+
Sbjct: 559 FDSGTSWAQLKDDSPENSPADVYLEGSDQHRGWFQSSLLTYISHQLAQGGKSSFKAPFKT 618
Query: 801 VFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPA 860
+ HGF +D+ G KMSKS+GN I H+I G P K V + +P
Sbjct: 619 LITHGFTLDQHGRKMSKSIGNTIQPHEIMGGTLLPPLKPKKVKGKGPKPKL-----DVPV 673
Query: 861 Y---GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN---HSES 914
Y G D LR W AA + V IG+ +L + + K R + + LLG L + +E
Sbjct: 674 YDALGPDALRLW-AAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPKNEV 732
Query: 915 TGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLY 974
D L +L T + ++ +A + + E SAFY +KDRLY
Sbjct: 733 PYESLHATDKIALVQLHNLVKTSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLY 792
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
DS +G +R + TL +I+ + + PI+P L EE + H P F
Sbjct: 793 ADSGSGISRRAAQTTLFHIYTHVQGLLGPIVPLLIEETWEHTPGNIKGF 841
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/416 (43%), Positives = 255/416 (61%), Gaps = 28/416 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LYSWQ+ F LHDGPPYANG HIGHA+NKILKDI R L +GKRVHYVPGW
Sbjct: 42 DLYSWQQRNRPATATFTLHDGPPYANGDLHIGHALNKILKDIICRVQLAKGKRVHYVPGW 101
Query: 66 DCHGLPIELKAITSKDKLL--------SPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ + +L IR A+ A +T++ Q F +W ++ DW
Sbjct: 102 DCHGLPIELKALQGQKELGDLRSAGRDGAAQIRSAARQLAEKTVSQQMEGFRNWAIMGDW 161
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
+ N Y T +K++ + QL F + ++ IYR KPVYWSPSS TALAE+ELEYK DH+S
Sbjct: 162 D-NAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSGTALAEAELEYKEDHIST 220
Query: 178 SIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKG 232
+ +K L+ +PA + E + D+ A+IWTTTPW+LPAN +A NP EY++ S +
Sbjct: 221 AALVKFVLDDLPAQVWENSLLVGNDISAVIWTTTPWTLPANAALAVNPDFEYTIVYSARH 280
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCD-FPGQYLQDITYIH----PINKEQRDLKLLPAGF 287
++VA+ ++ L+ + VV G L + TY P +++QR ++ A F
Sbjct: 281 GKLLVAQSRLQYLEELLEDHFTVVVPVVMGSELLNSTYRSLFKGPESEKQR---IIAADF 337
Query: 288 VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILG 343
V++ G+G+VHCAP HG +D+ LA IP + +G+Y+ A P L G +LG
Sbjct: 338 VTADAGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRYTRFAMPSQPDLLTGKAVLG 397
Query: 344 DGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
DG V+ +L E +L ++ Y+H YPYDWR+K PVI++A++QWF D I+ EA+
Sbjct: 398 DGNHAVIKYLSENGILIHKHAYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAI 453
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVL-HLVEPDVLWTEN-YQHSYPYDWRTKK 1162
+ +G+Y+ A P L G +LG+G V+ +L E +L ++ Y+H YPYDWR+K
Sbjct: 372 VDGEGRYTRFAMPSQPDLLTGKAVLGDGNHAVIKYLSENGILIHKHAYKHKYPYDWRSKL 431
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ EA+ L+ V F+P S K L + R WCISRQR WGVP
Sbjct: 432 PVIIRATEQWFADVGDIRGEAIQALQSVQFIPPSGKSRLETFVRNRSEWCISRQRAWGVP 491
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ ++ E+ + H +I+E G D WW+
Sbjct: 492 IPALYHRTTGEAVLTKES-VSHIMKVIEERGIDAWWT 527
>gi|385831347|ref|YP_005869160.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
gi|418039117|ref|ZP_12677426.1| Isoleucine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
I-1631]
gi|326407355|gb|ADZ64426.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
gi|354692477|gb|EHE92300.1| Isoleucine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
I-1631]
gi|374673972|dbj|BAL51863.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis IO-1]
Length = 932
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 226/644 (35%), Positives = 341/644 (52%), Gaps = 66/644 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K L E D+ +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAH 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV +V G ++A + + E L+W + +V+ G L+ + HP
Sbjct: 247 PDYDYSVVAVNGRKFVIASEMLEAVAEKLEWE---NPEVLQTIKGSELEYMVAKHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ A +V+ GTGLVH AP HG+DD+ + K+PVL+ I N+G Y+ D PGL
Sbjct: 302 DRETLIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLH--LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EGL D ++V+ L E D L E + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGL--FYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E V++V K L + + R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVERVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPLPIFYGENGEPIITPETT 478
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
+H L E G W+ + LL + + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 -EHVAKLFAEFGSKVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDSGSSWNGVL 537
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
++ PA +Y+EG DQ GWF SS+ TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 538 NERDYLSFPADLYLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFVLDGKGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+T+ +G D+LR WVA+ +
Sbjct: 598 IGNTIVPKDVTK-----------------------------KFGADILRLWVAS-IDTES 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + +IL+ + +KIR++LR+L+ + + +I R VD YML + E
Sbjct: 628 DVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVKFNELV 687
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ T Y + + + ++NF+ N+LS+FY KD +Y ++ N R S ++ I
Sbjct: 688 KQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYVIL 747
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L++ + PI+PH AEE +++L F+ + GS
Sbjct: 748 KDLVKILVPILPHTAEETWTYLEHEPENFAYLAEMPEAAEIPGS 791
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 241/397 (60%), Gaps = 16/397 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY ++E GKP F+LHDGPPYANG H+GH++NKI KDI +R + G R YVPGWD
Sbjct: 36 LYEKRQELNEGKPSFMLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K K + LD ++ + +A++ ++ Q+++F+S GVLADW+ Y T
Sbjct: 96 THGLPIEQQLAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDR-PYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++ K
Sbjct: 155 LLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVAFK 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
L E D+ +IWTTTPW++P+N I +P +YSV +V G ++A ++E+
Sbjct: 214 AKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPDYDYSVVAVNGRKFVIASEMLEA 270
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+ + + EV+ G L+ + HP R+ ++ A +V+ GTGLVH AP H
Sbjct: 271 VAEKLEWENPEVLQTIKGSELEYMVAKHPFY--DRETLIMNADYVTLDSGTGLVHVAPGH 328
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLWT- 360
G+DD+ + K+PVL+ I N+G Y+ D PGLEGL D ++V+ L E D L
Sbjct: 329 GEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGLEGL--FYDEGNKVVSKWLEEKDALLKL 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 386 EFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNIL 422
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKP 1163
L+ I N+G Y+ D PGLEGL EG V L E D L E + HSYP+DWRTKKP
Sbjct: 344 LSPIDNRGYYT-DEAPGLEGL-FYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L +E V++V K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRQNILDEVERVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E +H L E G W+ + LL
Sbjct: 462 PIFYGENGEPIITPETT-EHVAKLFAEFGSKVWFEREAKDLL 502
>gi|406664684|ref|ZP_11072459.1| Isoleucine--tRNA ligase [Bacillus isronensis B3W22]
gi|405387532|gb|EKB46956.1| Isoleucine--tRNA ligase [Bacillus isronensis B3W22]
Length = 921
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 326/619 (52%), Gaps = 61/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
+ALAE+E+EYK D S SIY+ + VPA D +IWTTTPW++PAN
Sbjct: 192 SALAEAEIEYK-DVESYSIYVAFGIKDSKGVVPA-------DAKFVIWTTTPWTIPANLG 243
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
I+ NP Y V G+ IVAK L+E L TF D+ +V + G+ L I HPI K
Sbjct: 244 ISVNPEFTYVVVETNGSKYIVAKDLLEKLSATFGWEDVQIVQEVQGEQLDMIVAEHPIYK 303
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RD ++ V++ GTG VH AP HG+DD+ + + +L+ + N G Y+ +A PG
Sbjct: 304 --RDSLVMVGDHVTADAGTGCVHTAPGHGEDDYQIGKRYGLDILSPVDNGGCYTNEA-PG 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EGL + L E + L + HSYP+DWRTKKPVI +A+ QWF E +
Sbjct: 361 FEGLFYEKANPVVIEKLKEENALLHVSKFTHSYPHDWRTKKPVIYRATPQWFASVEMFRD 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
E L ++ F P + L + I R W ISRQR WGVPIP+FY D T I+ I
Sbjct: 421 ELLDAVKATEFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIPIFYAEDETPIITPETIA 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ + LL + N TK NDI+D+WFDSG S VL +
Sbjct: 481 HISKLFREHGSNIWFQREAKDLLPEGFTHEGSPNGKFTKENDIMDVWFDSGSSHQGVLVE 540
Query: 766 K----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + HGFV+D +G KMSKS+GN
Sbjct: 541 RGLKYPADLYLEGSDQHRGWFNSSLITSVAINGHAPYKGLLTHGFVLDGEGRKMSKSLGN 600
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I K + YG D++R WVA+ V
Sbjct: 601 TIDP-----------------------------IKVMNQYGADIIRMWVAS-VDYTGDVR 630
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I ++L + +K+R++LR+L G + + +E+T ++ R +D YM RL + T+
Sbjct: 631 ISMDMLKQVSETYRKVRNTLRFLHGNVTDFNETTDRVAYEELREMDQYMYMRLQDVVKTI 690
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y + ++ + NFV ELS+FY + KD +Y + + + R + +++ L
Sbjct: 691 REAYDRYDFSTVYTTVNNFVAIELSSFYLDIAKDVVYIEGTDNKDRRAMQTVMYDTLMAL 750
Query: 998 LRTVAPIMPHLAEEVYSHL 1016
++ + PI+PH EE++S++
Sbjct: 751 VKLLTPIIPHTTEELWSYI 769
Score = 292 bits (747), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 229/394 (58%), Gaps = 22/394 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E +P ++LHDGPPYANG HIGHA+NK++KD+ R + G V Y+PGWD HGLPI
Sbjct: 43 ERTKDRPHYLLHDGPPYANGDIHIGHALNKVIKDMINRQKSMSGFHVPYIPGWDTHGLPI 102
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T+K K +S + R+ + +A E I QK++F GV DW N Y T E+
Sbjct: 103 E-QALTNKGVKRKEMSVAEFRELCEKYAYEQIENQKSQFRRLGVRGDWA-NPYITLKPEF 160
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ-- 187
Q+ F + ++ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+ +
Sbjct: 161 EARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEYK-DVESYSIYVAFGIKDSK 219
Query: 188 --VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL 245
VPA D +IWTTTPW++PAN I+ NP Y V G+ IVAK L+E L
Sbjct: 220 GVVPA-------DAKFVIWTTTPWTIPANLGISVNPEFTYVVVETNGSKYIVAKDLLEKL 272
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
TF D+++V + G+ L I HPI K RD ++ V++ GTG VH AP HG
Sbjct: 273 SATFGWEDVQIVQEVQGEQLDMIVAEHPIYK--RDSLVMVGDHVTADAGTGCVHTAPGHG 330
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-TENY 363
+DD+ + + +L+ + N G Y+ +A PG EGL + L E + L +
Sbjct: 331 EDDYQIGKRYGLDILSPVDNGGCYTNEA-PGFEGLFYEKANPVVIEKLKEENALLHVSKF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E + E L
Sbjct: 390 THSYPHDWRTKKPVIYRATPQWFASVEMFRDELL 423
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPV 1164
L+ + N G Y+ +A PG EGL + L E + L + HSYP+DWRTKKPV
Sbjct: 345 LSPVDNGGCYTNEA-PGFEGLFYEKANPVVIEKLKEENALLHVSKFTHSYPHDWRTKKPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF E + E L ++ F P + L + I R W ISRQR WGVPIP
Sbjct: 404 IYRATPQWFASVEMFRDELLDAVKATEFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIP 463
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL-----NTSDVNSNVTKSN 1276
+FY D T I+ I H L EHG + W+ + LL + N TK N
Sbjct: 464 IFYAEDETPIITPETIAHISKLFREHGSNIWFQREAKDLLPEGFTHEGSPNGKFTKEN 521
>gi|254302496|ref|ZP_04969854.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148322688|gb|EDK87938.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 933
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 342/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH+S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLAESAFKDIGIENAELIKEFKGKDLEYTTYKHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ L K+PV++ I ++G + +AG +GL
Sbjct: 313 GLVILGNHVTADAGTGAVHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W S E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLHRPCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPEDV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L + +
Sbjct: 643 RISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSIARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ +P+
Sbjct: 763 LTKMVAPILSFTAEEIWESIPA 784
Score = 306 bits (784), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 234/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGFKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+K + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVAKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DHVS SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKDIGIENAEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++ L K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLVILGNHVTADAGTGAVHTAPGHGQDDYVVGLNYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + HL E +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKSPEELI 514
>gi|297530697|ref|YP_003671972.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|297253949|gb|ADI27395.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
Length = 924
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 228/626 (36%), Positives = 334/626 (53%), Gaps = 56/626 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +LEG D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKDGKG-VLEG--DERIVIWTTTPWTIPANLAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y V V G +VA L E++ D VV G+ L+ + HP +RD
Sbjct: 247 PDLDYHVVDVSGKRYVVAAALAESVAKEIGWDAWSVVKTVKGKELEYVVAKHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ +PVL + +G Y + PG EG+
Sbjct: 305 SLVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFEGM 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 364 FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRATTQWFASIDKIRSELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E ++PE + + + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 424 AIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TIEHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + S N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDSGSSHQAVLVERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 543 LMRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V I
Sbjct: 603 -----------VPA------------------KVMEQFGADILRLWVAS-VDYQADVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R++LG L + + ++ VD YML +L + +
Sbjct: 633 DHILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPIGELGEVDRYMLAKLNKLIAKVKK 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + +F ELSAFY + KD LY ++ + AR + L+ L +
Sbjct: 693 AYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADSRARRAVQTVLYETVVALAK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSS 1025
+API+PH A+EV+ H+P+R+ S
Sbjct: 753 LIAPILPHTADEVWEHIPNRRENVES 778
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 227/396 (57%), Gaps = 12/396 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKILKDI +R + G YVPGW
Sbjct: 35 DIYRKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMNGYCAPYVPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L K +S + RK+ + +A E I+ Q+ +F+ GV DW+ N Y
Sbjct: 95 DTHGLPIETALAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGDWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ +LEG D +IWTTTPW++PAN IA +P L+Y V V G +VA L E
Sbjct: 213 PVKDGKG-VLEG--DERIVIWTTTPWTIPANLAIAVHPDLDYHVVDVSGKRYVVAAALAE 269
Query: 244 SLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ D VV G+ L+ + HP +RD ++ V++ GTG VH AP
Sbjct: 270 SVAKEIGWDAWSVVKTVKGKELEYVVAKHPFY--ERDSLVVCGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ +PVL + +G Y + PG EG+ K L E L
Sbjct: 328 HGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFEGMFYEDANKAITQKLEEVGALLKLG 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 387 FITHSYPHDWRTKQPTIFRATTQWFASIDKIRSELL 422
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 1110 TNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKA 1168
++ Y + PG EG+ K L E L + HSYP+DWRTK+P I +A
Sbjct: 347 VDERGYMTEEAPGFEGMFYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRA 406
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY- 1227
+ QWF ++I+ E L ++ ++PE + + + + R WCISRQR WGVPIPVFY
Sbjct: 407 TTQWFASIDKIRSELLQAIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYG 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 467 ENGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 502
Score = 48.1 bits (113), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 1026 FCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1085
FC ++ Y +AK ILY ++ + AR + L+ L + +API+PH A+EV+
Sbjct: 709 FCTVELSAFYL-DMAKDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWE 767
Query: 1086 HLPSRQGTFSS 1096
H+P+R+ S
Sbjct: 768 HIPNRRENVES 778
>gi|295657888|ref|XP_002789508.1| isoleucyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283263|gb|EEH38829.1| isoleucyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1024
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 241/659 (36%), Positives = 343/659 (52%), Gaps = 65/659 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGAT-DLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH S + +K L +P+ L L G T ++ A++WTTTPW+LPAN
Sbjct: 214 TALAEAELEYREDHKSIAALVKFPLTSMPSKLRDMLPGDTSEVFAVVWTTTPWTLPANAA 273
Query: 474 IAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFP--GQYLQDITYIH 528
IA NP LEYSV VK N +++ +E L+ Q V P G L+ T
Sbjct: 274 IAVNPTLEYSV--VKSENHGYLLIGSLRLEYLQTLLQEVEIAVVGSPLLGYELESETTYR 331
Query: 529 PINKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
P+ K++ K ++ A FV++ G+GLVHCAP HG +D+ + LA I + ++G ++
Sbjct: 332 PLFKDESVSKPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLAHGITAYAPVNDEGLFTD 391
Query: 588 DAGPG----LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQ 641
+A P L G +LG+G VL VE +L Y+H YPYDWRTK PVI++A++Q
Sbjct: 392 EAIPSNPSLLSGKPVLGEGNKDVLKYVESKGQLLAKHIYEHKYPYDWRTKLPVIVRATEQ 451
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
WF D I+ +AL L++V F+PE+ + L + R WCISRQR WGVPIP Y +T
Sbjct: 452 WFADVGDIRHDALRALKDVQFIPETGRSRLESFVKNRSEWCISRQRAWGVPIPALYHRET 511
Query: 702 --IIVNEANIKHFCTLIDEHGPDFWWSLS------VEQLLNTSDVNSNVTKSNDILDIWF 753
I+ E ++ H +IDE G D WW+ + L S + + D +D+WF
Sbjct: 512 GEAILTEKSVSHIMKVIDERGIDSWWTDDENDPAWIPSSLRGSS-GAGYKRGTDTMDVWF 570
Query: 754 DSGISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT---------APFR 799
DSG SW+ V A VY+EG DQ GWF SSLLT +A APF+
Sbjct: 571 DSGSSWTQVKTPASADGYAADVYLEGTDQHRGWFQSSLLTYIAQNIALGKPSSLVRAPFK 630
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+ HGF +D+ KMSKS+GNVI + I G P + QG K+ P
Sbjct: 631 TLITHGFTLDKNSRKMSKSIGNVIHPNQIIDGTLLPPLKLQKY----------QGRKEEP 680
Query: 860 ------AYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS 912
A G D LR WVA+ +KD + IG+ +L + + K R + R LLG L +
Sbjct: 681 KVPLYDALGPDSLRLWVASSDYTKD--IIIGEPVLKAVNTSLHKYRMTFRLLLGSLQDFD 738
Query: 913 ESTG---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLV 969
+ +D L +L NT Y F++ +A + + E SAFY +
Sbjct: 739 PKSAIPYESLHVIDKIALLQLRNLVNTCQDAYLNFEFYKAVTAINKWANLEFSAFYIESL 798
Query: 970 KDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
KDRLY DS+N +R + TL +I++ + P++P L EE + H P + + F H
Sbjct: 799 KDRLYADSVNSLSRRAAQTTLCHIYYHFQVILGPVVPLLVEESWEHTP--EAIKAEFAH 855
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/426 (43%), Positives = 249/426 (58%), Gaps = 37/426 (8%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQR + F+LHDGPPYANG H+GHA+NKILKDI R L GKR+ YV GW
Sbjct: 42 DLYTWQRRLRPIENRFVLHDGPPYANGDLHVGHALNKILKDIVCRVQLAAGKRIDYVSGW 101
Query: 66 DCHGLPIELKAIT------------------SKDKLLSPLDIRKKAKNFALETINTQKAE 107
DCHGLPIELKA+ + ++ L IR A+ A T+ Q
Sbjct: 102 DCHGLPIELKALELQAQRDAGKLQSSGNEKGNANENLGAAAIRNAARQLAERTVVEQMKG 161
Query: 108 FESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESE 167
F W V+ADW +N + T DK + QL F + ++ I R KPVYWSPSSRTALAE+E
Sbjct: 162 FRQWAVMADW-NNSWKTMDKNFEYKQLDVFLKMVEKGLINRRFKPVYWSPSSRTALAEAE 220
Query: 168 LEYKPDHVSKSIYLKIKLNQVPAHL---LEGAT-DLHALIWTTTPWSLPANQFIAFNPAL 223
LEY+ DH S + +K L +P+ L L G T ++ A++WTTTPW+LPAN IA NP L
Sbjct: 221 LEYREDHKSIAALVKFPLTSMPSKLRDMLPGDTSEVFAVVWTTTPWTLPANAAIAVNPTL 280
Query: 224 EYSVASVKGAN---VIVAKCLVESLKWTFQ-TDIEVVCD-FPGQYLQDITYIHPINKEQR 278
EYSV VK N +++ +E L+ Q +I VV G L+ T P+ K++
Sbjct: 281 EYSV--VKSENHGYLLIGSLRLEYLQTLLQEVEIAVVGSPLLGYELESETTYRPLFKDES 338
Query: 279 DLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-- 335
K ++ A FV++ G+GLVHCAP HG +D+ + LA I + ++G ++ +A P
Sbjct: 339 VSKPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLAHGITAYAPVNDEGLFTDEAIPSNP 398
Query: 336 --LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
L G +LG+G VL VE +L Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 399 SLLSGKPVLGEGNKDVLKYVESKGQLLAKHIYEHKYPYDWRTKLPVIVRATEQWFADVGD 458
Query: 392 IKPEAL 397
I+ +AL
Sbjct: 459 IRHDAL 464
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 93/156 (59%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKK 1162
+ ++G ++ +A P L G +LGEG VL VE +L Y+H YPYDWRTK
Sbjct: 383 VNDEGLFTDEAIPSNPSLLSGKPVLGEGNKDVLKYVESKGQLLAKHIYEHKYPYDWRTKL 442
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ +AL L+ V F+PE+ + L + R WCISRQR WGVP
Sbjct: 443 PVIVRATEQWFADVGDIRHDALRALKDVQFIPETGRSRLESFVKNRSEWCISRQRAWGVP 502
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y +T I+ E ++ H +IDE G D WW+
Sbjct: 503 IPALYHRETGEAILTEKSVSHIMKVIDERGIDSWWT 538
>gi|393201810|ref|YP_006463652.1| isoleucyl-tRNA synthetase [Solibacillus silvestris StLB046]
gi|327441141|dbj|BAK17506.1| isoleucyl-tRNA synthetase [Solibacillus silvestris StLB046]
Length = 921
Score = 371 bits (952), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 326/619 (52%), Gaps = 61/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
+ALAE+E+EYK D S SIY+ + VPA D +IWTTTPW++PAN
Sbjct: 192 SALAEAEIEYK-DVESYSIYVAFGIKDSKGVVPA-------DAKFVIWTTTPWTIPANLG 243
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
I+ NP Y V G+ IVAK L+E L TF D+ +V + G+ L I HPI K
Sbjct: 244 ISVNPEFTYVVVETNGSKYIVAKDLLEKLSATFGWEDVQIVQEVQGEQLDMIVAEHPIYK 303
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RD ++ V++ GTG VH AP HG+DD+ + + +L+ + N G Y+ +A PG
Sbjct: 304 --RDSLVMVGDHVTAEAGTGCVHTAPGHGEDDYQIGKRYGLDILSPVDNGGCYTNEA-PG 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EGL + L E + L + HSYP+DWRTKKPVI +A+ QWF E +
Sbjct: 361 FEGLFYEKANPVVIEKLKEENALLHVSKFTHSYPHDWRTKKPVIYRATPQWFASVEMFRN 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
E L ++ F P + L + I R W ISRQR WGVPIP+FY D T I+ I
Sbjct: 421 ELLDAVKATEFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIPIFYAEDETPIITPETIA 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ + LL + N TK NDI+D+WFDSG S VL +
Sbjct: 481 HISKLFREHGSNIWFQREAKDLLPEGFTHEGSPNGKFTKENDIMDVWFDSGSSHQGVLVE 540
Query: 766 K----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + HGFV+D +G KMSKS+GN
Sbjct: 541 RGLKYPADLYLEGSDQHRGWFNSSLITSVAINGHAPYKGLLTHGFVLDGEGRKMSKSLGN 600
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I K + YG D++R WVA+ V
Sbjct: 601 TIDP-----------------------------IKVMNQYGADIIRMWVAS-VDYTGDVR 630
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I ++L + +K+R++LR+L G + + +E+T ++ R +D YM RL + T+
Sbjct: 631 ISMDMLKQVSETYRKVRNTLRFLHGNVTDFNETTDRVAYEELREMDQYMYMRLQDVVKTI 690
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y + ++ + NFV ELS+FY + KD +Y + + + R + +++ L
Sbjct: 691 REAYDRYDFSTVYTTVNNFVAIELSSFYLDIAKDVVYIEGTDNKDRRAMQTVMYDTLMAL 750
Query: 998 LRTVAPIMPHLAEEVYSHL 1016
++ + PI+PH EE++S++
Sbjct: 751 VKLLTPIIPHTTEELWSYI 769
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 229/394 (58%), Gaps = 22/394 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E +P ++LHDGPPYANG HIGHA+NK++KD+ R + G V Y+PGWD HGLPI
Sbjct: 43 ERTKDRPHYLLHDGPPYANGDIHIGHALNKVIKDMINRQKSMSGFHVPYIPGWDTHGLPI 102
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T+K K +S + R+ + +A E I QK++F GV DW N Y T E+
Sbjct: 103 E-QALTNKGVKRKEMSVAEFRELCEKYAYEQIENQKSQFRRLGVRGDWA-NPYITLKPEF 160
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ-- 187
Q+ F + ++ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+ +
Sbjct: 161 EARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEYK-DVESYSIYVAFGIKDSK 219
Query: 188 --VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL 245
VPA D +IWTTTPW++PAN I+ NP Y V G+ IVAK L+E L
Sbjct: 220 GVVPA-------DAKFVIWTTTPWTIPANLGISVNPEFTYVVVETNGSKYIVAKDLLEKL 272
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
TF D+++V + G+ L I HPI K RD ++ V++ GTG VH AP HG
Sbjct: 273 SATFGWEDVQIVQEVQGEQLDMIVAEHPIYK--RDSLVMVGDHVTAEAGTGCVHTAPGHG 330
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-TENY 363
+DD+ + + +L+ + N G Y+ +A PG EGL + L E + L +
Sbjct: 331 EDDYQIGKRYGLDILSPVDNGGCYTNEA-PGFEGLFYEKANPVVIEKLKEENALLHVSKF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E + E L
Sbjct: 390 THSYPHDWRTKKPVIYRATPQWFASVEMFRNELL 423
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPV 1164
L+ + N G Y+ +A PG EGL + L E + L + HSYP+DWRTKKPV
Sbjct: 345 LSPVDNGGCYTNEA-PGFEGLFYEKANPVVIEKLKEENALLHVSKFTHSYPHDWRTKKPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF E + E L ++ F P + L + I R W ISRQR WGVPIP
Sbjct: 404 IYRATPQWFASVEMFRNELLDAVKATEFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIP 463
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL-----NTSDVNSNVTKSN 1276
+FY D T I+ I H L EHG + W+ + LL + N TK N
Sbjct: 464 IFYAEDETPIITPETIAHISKLFREHGSNIWFQREAKDLLPEGFTHEGSPNGKFTKEN 521
>gi|302678049|ref|XP_003028707.1| hypothetical protein SCHCODRAFT_78695 [Schizophyllum commune H4-8]
gi|300102396|gb|EFI93804.1| hypothetical protein SCHCODRAFT_78695 [Schizophyllum commune H4-8]
Length = 986
Score = 371 bits (952), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 335/640 (52%), Gaps = 58/640 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPA-HLLEGATDLHALIWTTTPWSLPANQFIAF 476
+ALAE+ELEY PDH S S+Y+ +L +P+ H L GA L+WTTTPW+L AN I+
Sbjct: 225 SALAEAELEYAPDHSSHSVYVSFELGDLPSDHALAGAK---LLVWTTTPWTLTANMAISV 281
Query: 477 NPALEYSVAS--VKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
NP + Y+V G ++VA+ ++ L T +D+V PG L ++Y
Sbjct: 282 NPEVVYAVVKHVETGDLLVVAEERIKALSNVVGT-LDLVHTLPGSDLLGLSYKPLFPGST 340
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL--ALAEKIPVLNLITNQGKYSPDAG-P 591
+++PA +V++ GTGLVHCAPAHG +D+ + + GK++ + P
Sbjct: 341 HTTEIIPASYVTTDTGTGLVHCAPAHGAEDYATWNTTGRGGELTCHVDADGKFNEETPHP 400
Query: 592 GLEGLNILGDGKDQVLHLV-EPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERI 649
L G +LGDG + ++ L+ E L + + QH YPYDW+TKKPVI+ A+ QWF + E I
Sbjct: 401 NLIGKEVLGDGSEAMVELLRERGQLVKDQWIQHRYPYDWKTKKPVIVTATSQWFANLEDI 460
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY------DGDTII 703
K +++ L +V+F P ++ L I R WCISRQRVWGVPIP Y + +
Sbjct: 461 KGKSIEALTDVSFTPAQSRNRLEAFIRSRSEWCISRQRVWGVPIPSLYLTPPASPTEQTV 520
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISWSH 761
++ A++ H ++D G + WWS VE + + T K D +D+WFDSG SWS
Sbjct: 521 LDSASLSHILAVLDAKGTEHWWSGPVEDFIPPHLAHEPGTWRKGTDTMDVWFDSGTSWSM 580
Query: 762 VL-------KDKPAHVYMEGMDQINGWFMSSLLTSVAL----KHTAPFRNVFLHGFVVDE 810
+ + A V +EG DQ GWF S LLT +A K AP++ + HG V+D+
Sbjct: 581 LAGLEGQEGRKHLADVCLEGSDQHRGWFQSQLLTRIATSEDGKCAAPYKTLITHGMVLDQ 640
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
G KMSKS+GN+IS I G K K PAYG D LR W
Sbjct: 641 HGKKMSKSLGNIISPLSIVLGGKD--------------------KKAEPAYGADTLRLW- 679
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
AA + IG +L+ + + +++IR+S+R++LG + G +D Y+
Sbjct: 680 AATVEYWHDMSIGPVVLSQTAETMRRIRNSVRFILGNIGPADRRAGPPMAPEFTLLDRYV 739
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L L + + + Y F + R L NF LS+ YF + KD LY D+++ R +
Sbjct: 740 LHELQQLEQVALSQYASFNFPRVVHALNNFANVTLSSLYFDVTKDCLYADAVDSVERRTV 799
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L I + AP++PHLAEEV+SHL G SSF
Sbjct: 800 TAVLEQILRTMTSVYAPMLPHLAEEVHSHL--NPGNTSSF 837
Score = 315 bits (808), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 178/408 (43%), Positives = 249/408 (61%), Gaps = 18/408 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY Q E G P ++LHDGPPYANG H+GHA+NKILKDI R ++ QG+RVHYVPGWD
Sbjct: 67 LYREQWENAPG-PLYVLHDGPPYANGHLHMGHALNKILKDIICRYHVAQGRRVHYVPGWD 125
Query: 67 CHGLPIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW--EHNC 121
CHGLPIE KA I + L+P ++R+ A+ A I QKAEF +GV+ADW E +
Sbjct: 126 CHGLPIENKALQEIKKDARSLAPHEVRRAARKTAFREIAQQKAEFRQFGVMADWMNEDST 185
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D +Y QL F + + IYR +PVY+SPSSR+ALAE+ELEY PDH S S+Y+
Sbjct: 186 YRTLDHKYEMRQLHIFKQMVDKGLIYRKYRPVYYSPSSRSALAEAELEYAPDHSSHSVYV 245
Query: 182 KIKLNQVPA-HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS--VKGANVIVA 238
+L +P+ H L GA L+WTTTPW+L AN I+ NP + Y+V G ++VA
Sbjct: 246 SFELGDLPSDHALAGAK---LLVWTTTPWTLTANMAISVNPEVVYAVVKHVETGDLLVVA 302
Query: 239 KCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
+ +++L T +++V PG L ++Y +++PA +V++ GTGLVH
Sbjct: 303 EERIKALSNVVGT-LDLVHTLPGSDLLGLSYKPLFPGSTHTTEIIPASYVTTDTGTGLVH 361
Query: 299 CAPAHGQDDFLL--ALAEKIPVLNLITNQGKYSPDAG-PGLEGLNILGDGKDQVLHLV-E 354
CAPAHG +D+ + + GK++ + P L G +LGDG + ++ L+ E
Sbjct: 362 CAPAHGAEDYATWNTTGRGGELTCHVDADGKFNEETPHPNLIGKEVLGDGSEAMVELLRE 421
Query: 355 PDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKT 401
L + + QH YPYDW+TKKPVI+ A+ QWF + E IK +++ T
Sbjct: 422 RGQLVKDQWIQHRYPYDWKTKKPVIVTATSQWFANLEDIKGKSIEALT 469
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 9/164 (5%)
Query: 1109 ITNQGKYSPDAG-PGLEGLNILGEGKDQVLHLV-EPDVLWTENY-QHSYPYDWRTKKPVI 1165
+ GK++ + P L G +LG+G + ++ L+ E L + + QH YPYDW+TKKPVI
Sbjct: 387 VDADGKFNEETPHPNLIGKEVLGDGSEAMVELLRERGQLVKDQWIQHRYPYDWKTKKPVI 446
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
+ A+ QWF + E IK +++ L V+F P ++ L I R WCISRQRVWGVPIP
Sbjct: 447 VTATSQWFANLEDIKGKSIEALTDVSFTPAQSRNRLEAFIRSRSEWCISRQRVWGVPIPS 506
Query: 1226 FY------DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y + +++ A++ H ++D G + WWS PVE +
Sbjct: 507 LYLTPPASPTEQTVLDSASLSHILAVLDAKGTEHWWSGPVEDFI 550
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 1039 IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
+ K LY D+++ R + L I + AP++PHLAEEV+SHL G SSF
Sbjct: 781 VTKDCLYADAVDSVERRTVTAVLEQILRTMTSVYAPMLPHLAEEVHSHL--NPGNTSSF 837
>gi|406705693|ref|YP_006756046.1| isoleucine--tRNA ligase [alpha proteobacterium HIMB5]
gi|406651469|gb|AFS46869.1| isoleucine--tRNA ligase [alpha proteobacterium HIMB5]
Length = 911
Score = 371 bits (952), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 342/621 (55%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EY+ DH S +IY K V + ++ D +IWTTTPW++PAN+ +AFN
Sbjct: 194 TALADAEVEYQ-DHKSDTIYTAFK---VKSSKIKELVDSDIIIWTTTPWTIPANKALAFN 249
Query: 478 PALEYSVASV------KGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPI 530
AL+Y + + KG +++AK L E++ K +++ F G+ + HP
Sbjct: 250 QALDYVLIEILDENDFKGKKIVIAKDLQESVVKECSLEKFNLIKTFSGKEFEGTVCFHPF 309
Query: 531 NKE--QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
+ D+ +L A FV++ +GTG+VHCAP+HG DDF L L I + + GKY+ +
Sbjct: 310 FEMGYDYDIPMLEARFVTTDQGTGIVHCAPSHGPDDFNLCLNNGIKAIETVDGDGKYTSN 369
Query: 589 AGPGLEGLNILGDGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
EGL+I + L +L HSYP+ WR+K P++ +A+ QWFI E
Sbjct: 370 VKE-FEGLHIFKSNSIVIEKLKNYKRLLSNGELVHSYPHSWRSKAPLVHRATPQWFISME 428
Query: 648 --RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
+++ +AL ++E F P+ K+ L+ I RP WC+SRQRVWGVP+P+F T I+
Sbjct: 429 SHKLRDKALKAIDETEFFPKKGKERLKSMIETRPDWCVSRQRVWGVPLPIFVHKKTKEIL 488
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
V++ I++ ++ ++ G D W+S ++ L S+ K +DI+++WFDSG + S VL
Sbjct: 489 VDDEVIENIASIYEKEGSDCWFSDDPQRFLGNKFKASDYEKLSDIVEVWFDSGSTHSFVL 548
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ + PA +Y+EG DQ GWF SSLL S + APF ++ HGFVVD KG KMSKS
Sbjct: 549 EKRDDLKWPASMYLEGSDQHRGWFHSSLLESCGTRGRAPFESILSHGFVVDGKGLKMSKS 608
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI+ DI L YG D+LR WVA+ ++
Sbjct: 609 LGNVIAPEDI-----------------------------LKKYGADILRIWVAS-SNYAE 638
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG----SISRY--VDVYMLKRLCE 932
+ I IL+ D +KIR++ RYLLG +++ +++ ++ YML +L +
Sbjct: 639 DLRIDYTILDQHADSYRKIRNTFRYLLGNINDDFNEVDLDKLNLNELPELERYMLNKLYK 698
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + ++ + + LLNF +LSAFYF + KD LYC++ + E R S + TL+
Sbjct: 699 LDKKFNGYFLKYDFHNLYKELLNFCTVDLSAFYFDIRKDTLYCETRDSEIRKSCIKTLNI 758
Query: 993 IFHVLLRTVAPIMPHLAEEVY 1013
I L+R API+ EE++
Sbjct: 759 ILDNLIRWFAPILSFTTEEIF 779
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 229/409 (55%), Gaps = 24/409 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY+ R+A GK +FILHDGPPYANG H+G A+NKILKDI ++ + + GK YVPGWD
Sbjct: 35 LYNELRKASKGKEKFILHDGPPYANGNIHMGTALNKILKDIIVKFHQMDGKDSIYVPGWD 94
Query: 67 CHGLPIELK------AITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
CHGLPIE K + ++ RK+ + FA + I+ K +F+ GV+ DWE N
Sbjct: 95 CHGLPIEWKIEEQYKKNKKNKNDVPIVEFRKECREFAEKWIDIHKGQFKRLGVIGDWE-N 153
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T + + K+ +YR KPV WS +TALA++E+EY+ DH S +IY
Sbjct: 154 YYSTMSFSAEAQIVRELGKFLKEGSLYRGFKPVLWSTVEKTALADAEVEYQ-DHKSDTIY 212
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV------KGAN 234
K V + ++ D +IWTTTPW++PAN+ +AFN AL+Y + + KG
Sbjct: 213 TAFK---VKSSKIKELVDSDIIIWTTTPWTIPANKALAFNQALDYVLIEILDENDFKGKK 269
Query: 235 VIVAKCLVES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINKE--QRDLKLLPAGFVSSS 291
+++AK L ES +K ++ F G+ + HP + D+ +L A FV++
Sbjct: 270 IVIAKDLQESVVKECSLEKFNLIKTFSGKEFEGTVCFHPFFEMGYDYDIPMLEARFVTTD 329
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH 351
+GTG+VHCAP+HG DDF L L I + + GKY+ + EGL+I +
Sbjct: 330 QGTGIVHCAPSHGPDDFNLCLNNGIKAIETVDGDGKYTSNVKE-FEGLHIFKSNSIVIEK 388
Query: 352 LVE-PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEAL 397
L +L HSYP+ WR+K P++ +A+ QWFI E +++ +AL
Sbjct: 389 LKNYKRLLSNGELVHSYPHSWRSKAPLVHRATPQWFISMESHKLRDKAL 437
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPV 1164
+ + GKY+ + EGL+I + L +L HSYP+ WR+K P+
Sbjct: 357 IETVDGDGKYTSNVKE-FEGLHIFKSNSIVIEKLKNYKRLLSNGELVHSYPHSWRSKAPL 415
Query: 1165 ILKASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+ +A+ QWFI E +++ +AL ++ F P+ K+ L+ I RP WC+SRQRVWGVP
Sbjct: 416 VHRATPQWFISMESHKLRDKALKAIDETEFFPKKGKERLKSMIETRPDWCVSRQRVWGVP 475
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+P+F T I+V++ I++ ++ ++ G D W+S ++ L
Sbjct: 476 LPIFVHKKTKEILVDDEVIENIASIYEKEGSDCWFSDDPQRFL 518
>gi|409386153|ref|ZP_11238618.1| Isoleucyl-tRNA synthetase [Lactococcus raffinolactis 4877]
gi|399206563|emb|CCK19533.1| Isoleucyl-tRNA synthetase [Lactococcus raffinolactis 4877]
Length = 932
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 334/629 (53%), Gaps = 64/629 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SIY+ K L EG + +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIYVAFKATDTKGLLPEG---VEFVIWTTTPWTIPSNLGIFAH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y + +V ++A L+ E L+W D V+ G L + HP
Sbjct: 247 PDYDYVLVAVNDRQFVIASELLNTVAEKLEWA---DYKVLQTIKGSELDGMVVKHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD ++ A +V+ GTGLVH AP HG+DD+ + K+ VL+ I ++G Y+ D PGL
Sbjct: 302 DRDTLVMNAEYVTLDSGTGLVHVAPGHGEDDYFFSRKYKLGVLSPIDDRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EGL +G +V +E + +L E + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 361 EGL-FYDEGNKKVTEWLEENNALLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDKFRE 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
L+ +E V+++ K L + I R W ISRQR WGVP+P+FY DG II +E
Sbjct: 420 NILSEVENVDWIVPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIITSETT- 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L EHG WW + LL + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 EHIAQLFAEHGSIIWWERDAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVLN 538
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF SS+ TSVA+ AP++ V GFV D KG K SKS+
Sbjct: 539 QREELTYPADLYLEGSDQYRGWFNSSITTSVAVNGIAPYKAVLSQGFVQDAKGRKFSKSL 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ D+T+ YG D+LR WVA+
Sbjct: 599 GNGIAPKDVTK-----------------------------QYGADILRLWVAS-VDNTSD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + +++ + + +KIR++LR+L+ + ++ +++ + D Y+L RL +
Sbjct: 629 VRVSMDLIGQTSEAYRKIRNTLRFLIANTSDFDKTKDAVAFEDLKGSDKYLLVRLNQVIQ 688
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ Y + + R + NF+ N+LSAFY KD +Y ++ N R ++++
Sbjct: 689 SVREAYDRYNFMEVYRTIFNFLTNDLSAFYLDFAKDIVYIETANSTERRRMQTVMYDVLV 748
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFS 1024
L + + PI+PH AEE++++L + ++
Sbjct: 749 KLTKLLVPIVPHTAEEIWTYLEQEEEAYA 777
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 235/401 (58%), Gaps = 20/401 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ LY+++ + GKP F+LHDGPPYANG H+GHA+NKI KDI +R + G R YVPG
Sbjct: 34 ANLYAYRLKENEGKPSFVLHDGPPYANGDIHVGHAMNKISKDIIIRYKNMAGFRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + + +++AL ++ Q+ F+S GVL DWE N Y
Sbjct: 94 WDTHGLPIEQVLTKKGIKRKELDRAEYLRMCRDYALTQVDLQRKGFKSLGVLGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + + YIY+ KP+YWSPSS ++LAE+E+EY+ D S SIY+
Sbjct: 153 VTLQPEFEAAQIRVFGQMSENGYIYKGAKPIYWSPSSESSLAEAEIEYQ-DVRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K L EG + +IWTTTPW++P+N I +P +Y + +V ++A L+
Sbjct: 212 FKATDTKGLLPEG---VEFVIWTTTPWTIPSNLGIFAHPDYDYVLVAVNDRQFVIASELL 268
Query: 243 ----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E L+W D +V+ G L + HP RD ++ A +V+ GTGLVH
Sbjct: 269 NTVAEKLEW---ADYKVLQTIKGSELDGMVVKHPFY--DRDTLVMNAEYVTLDSGTGLVH 323
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-- 356
AP HG+DD+ + K+ VL+ I ++G Y+ D PGLEGL +G +V +E +
Sbjct: 324 VAPGHGEDDYFFSRKYKLGVLSPIDDRGYYT-DEAPGLEGL-FYDEGNKKVTEWLEENNA 381
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 382 LLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDKFRENIL 422
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 94/162 (58%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ I ++G Y+ D PGLEGL EG +V +E + +L E + HSYP+DWRTKKP
Sbjct: 344 LSPIDDRGYYT-DEAPGLEGL-FYDEGNKKVTEWLEENNALLKLEFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF ++ + L+ +E V+++ K L + I R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDKFRENILSEVENVDWIVPWGKTRLYNMIRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY DG II +E +H L EHG WW + LL
Sbjct: 462 PIFYAEDGTAIITSETT-EHIAQLFAEHGSIIWWERDAKDLL 502
>gi|322694852|gb|EFY86671.1| putative isoleucine--tRNA ligase [Metarhizium acridum CQMa 102]
Length = 954
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 228/625 (36%), Positives = 331/625 (52%), Gaps = 48/625 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKI----KLNQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH+S + Y+++ L+ +PA L ++A IWTTTPW+LPAN+
Sbjct: 190 TALAEAELEYREDHVSHAAYVRLPIVSDLSSIPA-LAGFDGPIYAAIWTTTPWTLPANKA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKW---TFQTDIDVVCDFPGQYLQDITYIHPI 530
IA + L YS+ V ++V V+ ++ F+ D +C G + + Y + +
Sbjct: 249 IAVHDKLLYSLLRVGDYGLLVGSSRVDAMRELLPPFEVVDDSIC---GSEIAGLRYRNAL 305
Query: 531 -NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K + ++ A FVS+ GTGLVH AP HGQDD+ I IT++G ++ +A
Sbjct: 306 RGKLAAEQPIVHADFVSADSGTGLVHMAPGHGQDDYEACARLGIEAFAPITDEGFFTQEA 365
Query: 590 GPGLEGL-----NILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
P L +IL G VL L++ DVL T + QH YPYDWRTK+PV+L+A+ QWF
Sbjct: 366 YPDRPQLLTGARSILEGGGKAVLELIKDDVLATHDIQHKYPYDWRTKQPVVLRATAQWFA 425
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD-GDTII 703
D RIK +L L V FVPES + L + R WCISRQR WGVPIP YD +
Sbjct: 426 DVGRIKEGSLKALSNVRFVPESGRSRLESFVKGRSEWCISRQRSWGVPIPALYDEAGNAV 485
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFDSGISWSHV 762
++E I+H +++ + W+S ++ +++ + D +D+WFDSG SW+ V
Sbjct: 486 MDEETIEHIISVMQQRTSQAWFSDPIDDPAWVPANLQGRHWRGTDTMDVWFDSGTSWTEV 545
Query: 763 LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT---------APFRNVFLHGFVVDEKGA 813
+P VY+EG DQ GWF SSLLT VA + PFR + HGF +D +G
Sbjct: 546 --GQPVDVYLEGSDQHRGWFQSSLLTYVASQKADGVSDADIQPPFRTLITHGFTLDAQGK 603
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GN + ++ G P KS G ++ A + A G D LR W AA
Sbjct: 604 KMSKSLGNTVVPEEVIDGRLLPPLKGKSKGG-------SKDAPRFDALGADALRLW-AAS 655
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEF 933
+ IG +IL + + K R+ ++ +LG LH S S +D + +L +
Sbjct: 656 CDFTSDILIGPSILQPIHNALIKYRTIVKMVLGSLHESSRSAPLTK--LDQMAIAQLSDT 713
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ +++ +A+ ++ +V +LSAFY +KDRLYC G L I
Sbjct: 714 MAQVWEAVNNYEFHKATGLINRWVATDLSAFYLEALKDRLYCGDGGG--------ALEPI 765
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPS 1018
F LR +API P L EE +SH PS
Sbjct: 766 FIGFLRMLAPITPVLVEEAWSHRPS 790
Score = 328 bits (842), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 189/415 (45%), Positives = 256/415 (61%), Gaps = 23/415 (5%)
Query: 6 ELYSWQREALNGKPE---FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
+LY WQ N +P+ F+LHDGPPYANG HIGHA+NKILKD+ +RS + GKRV Y
Sbjct: 35 DLYQWQ---TNNRPQNDPFVLHDGPPYANGPLHIGHALNKILKDMIVRSQVQNGKRVVYR 91
Query: 63 PGWDCHGLPIELKAITSKDK-LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
PGWDCHGLPIE+KA+ S LSP+ +R+ A+ A +TI Q F+S+GV+ADWE N
Sbjct: 92 PGWDCHGLPIEMKALGSNTAGGLSPVKVRESARKLASKTITEQAKGFQSFGVMADWE-NR 150
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
+ T D+EY QL F + + IYR KPVYWS SSRTALAE+ELEY+ DHVS + Y+
Sbjct: 151 WTTMDREYEIRQLRVFQKMVRHGLIYRKHKPVYWSVSSRTALAEAELEYREDHVSHAAYV 210
Query: 182 KI----KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 237
++ L+ +PA L ++A IWTTTPW+LPAN+ IA + L YS+ V ++V
Sbjct: 211 RLPIVSDLSSIPA-LAGFDGPIYAAIWTTTPWTLPANKAIAVHDKLLYSLLRVGDYGLLV 269
Query: 238 AKCLVESLKWTFQTDIEVVCD-FPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTG 295
V++++ EVV D G + + Y + + K + ++ A FVS+ GTG
Sbjct: 270 GSSRVDAMR-ELLPPFEVVDDSICGSEIAGLRYRNALRGKLAAEQPIVHADFVSADSGTG 328
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL-----NILGDGKDQVL 350
LVH AP HGQDD+ I IT++G ++ +A P L +IL G VL
Sbjct: 329 LVHMAPGHGQDDYEACARLGIEAFAPITDEGFFTQEAYPDRPQLLTGARSILEGGGKAVL 388
Query: 351 HLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
L++ DVL T + QH YPYDWRTK+PV+L+A+ QWF D RIK +L K + N+
Sbjct: 389 ELIKDDVLATHDIQHKYPYDWRTKQPVVLRATAQWFADVGRIKEGSL--KALSNV 441
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 95/158 (60%), Gaps = 6/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGL-----NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
IT++G ++ +A P L +IL G VL L++ DVL T + QH YPYDWRTK+P
Sbjct: 355 ITDEGFFTQEAYPDRPQLLTGARSILEGGGKAVLELIKDDVLATHDIQHKYPYDWRTKQP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+L+A+ QWF D RIK +L L V FVPES + L + R WCISRQR WGVPI
Sbjct: 415 VVLRATAQWFADVGRIKEGSLKALSNVRFVPESGRSRLESFVKGRSEWCISRQRSWGVPI 474
Query: 1224 PVFYD-GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
P YD +++E I+H +++ + W+S P++
Sbjct: 475 PALYDEAGNAVMDEETIEHIISVMQQRTSQAWFSDPID 512
>gi|261419333|ref|YP_003253015.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|319766149|ref|YP_004131650.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|261375790|gb|ACX78533.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|317111015|gb|ADU93507.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
Length = 924
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 228/626 (36%), Positives = 334/626 (53%), Gaps = 56/626 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +LEG D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKDGKG-VLEG--DERIVIWTTTPWTIPANLAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y V V G +VA L E++ D VV G+ L+ + HP +RD
Sbjct: 247 PDLDYHVVDVSGKRYVVAAALAESVAKEIGWDAWSVVKTVKGKELEYVVAKHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ +PVL + +G Y + PG EG+
Sbjct: 305 SLVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFEGM 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 364 FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E ++PE + + + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 424 AIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TIEHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + S N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDSGSSHQAVLVERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 543 LMRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V I
Sbjct: 603 -----------VPA------------------KVMEQFGADILRLWVAS-VDYQADVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R++LG L + + ++ VD YML +L + +
Sbjct: 633 DHILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPIGELGEVDRYMLAKLNKLIAKVKK 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + +F ELSAFY + KD LY ++ + AR + L+ L +
Sbjct: 693 AYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADSRARRAVQTVLYETVVALAK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSS 1025
+API+PH A+EV+ H+P+R+ S
Sbjct: 753 LIAPILPHTADEVWEHIPNRRENVES 778
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 227/396 (57%), Gaps = 12/396 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKILKDI +R + G YVPGW
Sbjct: 35 DIYRKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMNGYCAPYVPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L K +S + RK+ + +A E I+ Q+ +F+ GV DW+ N Y
Sbjct: 95 DTHGLPIETALAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGDWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ +LEG D +IWTTTPW++PAN IA +P L+Y V V G +VA L E
Sbjct: 213 PVKDGKG-VLEG--DERIVIWTTTPWTIPANLAIAVHPDLDYHVVDVSGKRYVVAAALAE 269
Query: 244 SLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ D VV G+ L+ + HP +RD ++ V++ GTG VH AP
Sbjct: 270 SVAKEIGWDAWSVVKTVKGKELEYVVAKHPFY--ERDSLVVCGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ +PVL + +G Y + PG EG+ K L E L
Sbjct: 328 HGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFEGMFYEDANKAITQKLEEVGALLKLG 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 387 FITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELL 422
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 1110 TNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKA 1168
++ Y + PG EG+ K L E L + HSYP+DWRTK+P I +A
Sbjct: 347 VDERGYMTEEAPGFEGMFYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRA 406
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY- 1227
+ QWF ++I+ E L ++ ++PE + + + + R WCISRQR WGVPIPVFY
Sbjct: 407 TTQWFASIDKIRNELLQAIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYG 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 467 ENGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 502
Score = 48.1 bits (113), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 1026 FCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1085
FC ++ Y +AK ILY ++ + AR + L+ L + +API+PH A+EV+
Sbjct: 709 FCTVELSAFYL-DMAKDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWE 767
Query: 1086 HLPSRQGTFSS 1096
H+P+R+ S
Sbjct: 768 HIPNRRENVES 778
>gi|367018116|ref|XP_003658343.1| hypothetical protein MYCTH_2293982 [Myceliophthora thermophila ATCC
42464]
gi|347005610|gb|AEO53098.1| hypothetical protein MYCTH_2293982 [Myceliophthora thermophila ATCC
42464]
Length = 975
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 229/645 (35%), Positives = 338/645 (52%), Gaps = 70/645 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL----NQVPA-HLLEGATDLHALIWTTTPWSLPAN 471
GTALAE+ELEY H+SK+ Y++ + +P LEG L+A+IWTTTPW+LPAN
Sbjct: 189 GTALAEAELEYNEAHVSKAAYVRFPVVGGHEGLPGLDRLEGR--LYAVIWTTTPWTLPAN 246
Query: 472 QFIAFNPALEYSVASVKGANVIVAKCLVENLKWTF--QTDIDVVCDFPGQYLQDITYIHP 529
+ IA + L Y + +VA+ +E + +++V+ G L + Y++
Sbjct: 247 RAIAVHDELTYHLVRAGQDAFLVAENCLERVAKVLPGAPEVEVLATVKGCELTRLRYVNV 306
Query: 530 INKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
+ + + + FV+ G+GLVHCAP HG DD+L L IPV + G+++ +
Sbjct: 307 LRGRSAEPQPFMHGDFVTDGSGSGLVHCAPGHGFDDYLACLPRGIPVSAPVDGDGRFTDE 366
Query: 589 AGPG----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
A P L G+++L G VL ++ DVL +Y+H YPYDWRTK+P+I++A+ QWF
Sbjct: 367 AFPDQPDRLRGISVLDGGSSAVLEILGDDVLDVHDYRHKYPYDWRTKQPIIIRATAQWFA 426
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTI 702
D IK ALA + +V FVP++AK L + R WCISRQR WGVPIP Y DG+ +
Sbjct: 427 DVGTIKDAALAAIGKVRFVPDNAKNRLEAFVKGRSEWCISRQRAWGVPIPALYEPDGNAV 486
Query: 703 IVNEANIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNSNVTKSNDILDIWFDSGISW 759
+ +E I H ++I E G D WW+ + + + ++ D +D+WFDSG SW
Sbjct: 487 MTDEV-IDHIISVIQERGTDAWWTDAPDDPAWIPEALRGRGQYSRGRDTMDVWFDSGTSW 545
Query: 760 SHVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT------------------------ 795
+ ++ DK A +Y+EG DQ GWF SSLLT VA
Sbjct: 546 T-MMGDKQADLYLEGSDQHRGWFQSSLLTRVAAAADADHDGGSDGGRRTTGSTTTDTLGL 604
Query: 796 APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSV-GNVISAHDITQG 854
+PF+ + HGF +D+ G KMSKS+GN+ISA + G+ P K GN D
Sbjct: 605 SPFKTLITHGFTLDKDGKKMSKSLGNIISADQVMDGSLLPPLKPKKKSGNAGPVKD---- 660
Query: 855 AKKLPAYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS 912
A G D LR WV AS D T + +G+ +L + + K R++++ L G +H +
Sbjct: 661 -----ALGPDALRLWV---ASSDYTRDIVLGEPVLKTIHQALLKYRTTIKMLTGSMHRSA 712
Query: 913 ESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
+ + VD L +L + + + Y ++ +A L ++ N+LSAFY +KDR
Sbjct: 713 RTAPLTA--VDEIALLQLGDVMDEVGRHYDAHEFNKAFGALNRWLANDLSAFYLEALKDR 770
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
LYC G L IF LR +AP+ P L EE + H P
Sbjct: 771 LYCADGGG--------VLEPIFVGFLRMLAPVAPLLVEEAWEHRP 807
Score = 331 bits (849), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/407 (43%), Positives = 244/407 (59%), Gaps = 16/407 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ EF+LHDGPPYANG+ H GHA+NKILKD+ LR + QG+RV YVPGW
Sbjct: 35 DLYKWQAANRPADDEFVLHDGPPYANGSLHAGHALNKILKDMILRVKIQQGRRVSYVPGW 94
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIELKA+ + K +SP IRK A+ A +T+ Q F ++GV+ADW+ + T
Sbjct: 95 DCHGLPIELKAVDVAAGKSMSPGAIRKAARKLAAKTVTEQMKAFRTYGVMADWDAR-WTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D Y QL F + ++ +YR KPVYWSPSS TALAE+ELEY HVSK+ Y++
Sbjct: 154 MDMAYEVRQLRLFQRMARRGLVYRRYKPVYWSPSSGTALAEAELEYNEAHVSKAAYVRFP 213
Query: 185 L----NQVPA-HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
+ +P LEG L+A+IWTTTPW+LPAN+ IA + L Y + +VA+
Sbjct: 214 VVGGHEGLPGLDRLEGR--LYAVIWTTTPWTLPANRAIAVHDELTYHLVRAGQDAFLVAE 271
Query: 240 CLVESLKWTF--QTDIEVVCDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGL 296
+E + ++EV+ G L + Y++ + + + + FV+ G+GL
Sbjct: 272 NCLERVAKVLPGAPEVEVLATVKGCELTRLRYVNVLRGRSAEPQPFMHGDFVTDGSGSGL 331
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVLHL 352
VHCAP HG DD+L L IPV + G+++ +A P L G+++L G VL +
Sbjct: 332 VHCAPGHGFDDYLACLPRGIPVSAPVDGDGRFTDEAFPDQPDRLRGISVLDGGSSAVLEI 391
Query: 353 VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ DVL +Y+H YPYDWRTK+P+I++A+ QWF D IK AL
Sbjct: 392 LGDDVLDVHDYRHKYPYDWRTKQPIIIRATAQWFADVGTIKDAALAA 438
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 95/154 (61%), Gaps = 7/154 (4%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ G+++ +A P L G+++L G VL ++ DVL +Y+H YPYDWRTK+P+
Sbjct: 357 VDGDGRFTDEAFPDQPDRLRGISVLDGGSSAVLEILGDDVLDVHDYRHKYPYDWRTKQPI 416
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D IK ALA + V FVP++AK L + R WCISRQR WGVPIP
Sbjct: 417 IIRATAQWFADVGTIKDAALAAIGKVRFVPDNAKNRLEAFVKGRSEWCISRQRAWGVPIP 476
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
Y DG+ ++ +E I H ++I E G D WW+
Sbjct: 477 ALYEPDGNAVMTDEV-IDHIISVIQERGTDAWWT 509
>gi|388853980|emb|CCF52324.1| probable ISM1-isoleucine-tRNA ligase, mitochondrial [Ustilago hordei]
Length = 1096
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 233/679 (34%), Positives = 349/679 (51%), Gaps = 108/679 (15%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD------LHALIWTTTPWSLPAN 471
TALAESELEY+ DH+SK++Y+ K+ P L + D L+ +IWTTTPWSLP+N
Sbjct: 276 TALAESELEYREDHLSKAVYVAFKMIAGPELLQKLGQDADFDHRLNLIIWTTTPWSLPSN 335
Query: 472 QFIAFNPALEYSV---ASVKGANVIVAKCLVENLKW-------------------TFQTD 509
+ NP LEYS+ A +G +V +E L+ TF
Sbjct: 336 MAVNVNPGLEYSIVRRAGREGPYYVVGTDRIEALQVLPSSIVVGERDAEGDGKGPTFGP- 394
Query: 510 IDVVCDFPGQYLQDITYIHPIN-KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL- 567
++ V G L D TY P++ + + +L A +V++ GTGLVH APAHG +D+ +
Sbjct: 395 LEEVARVRGSDLTDSTYRTPLSASDSKPRPILMADYVTAVSGTGLVHSAPAHGAEDYQIW 454
Query: 568 ---ALAEKIPVLNLITNQGKYSPDA------------------GPGLEGLNILGDGKDQV 606
+ + + + ++G+YS D G L G ++ +G +V
Sbjct: 455 KQQGHIHRDGIFSPVNDEGRYSSDILQLDAASSAGSSEDDTKLGQRLLGKEVISEGAKEV 514
Query: 607 LHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVP 664
+++ ++ + +H YPYDWR+K+PVI++A+ QWF + +RIK +A+ L++V FVP
Sbjct: 515 TAILQERGALISAQTLRHKYPYDWRSKQPVIVRATAQWFANLDRIKEQAIEALQDVTFVP 574
Query: 665 ESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPD 722
+++ L I R WCISRQRVWGVPIPV YD D ++ NI+H L++ HG D
Sbjct: 575 INSRSRLESFIMGRSEWCISRQRVWGVPIPVLYDTVTDEPLMTVENIEHIAALLERHGTD 634
Query: 723 FWWSLSVEQLLNTSDVNSNVT--KSNDILDIWFDSGISW-------------SHVLKDKP 767
+WW E+ + N + K D +D+WFDSG SW + VL P
Sbjct: 635 YWWKADAEEFVAPQYRNEERSWRKGEDTIDVWFDSGTSWATLRNQIAVDNAGTQVLSSSP 694
Query: 768 ---AHVYMEGMDQINGWFMSSLLTSVAL-----KHTAPFRNVFLHGFVVDEKGAKMSKSV 819
A VY+EG DQ GWF SSL+T+VA K AP++ V HG+V+D + KMSKS+
Sbjct: 695 TSVADVYLEGSDQHRGWFQSSLITAVATTPEGQKPVAPYKTVVTHGYVLDNESRKMSKSL 754
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDP 878
GNVIS I QG K GA + PAYGVDVLR WVA + + DP
Sbjct: 755 GNVISPLSIIQGGK--------------------GADQ-PAYGVDVLRLWVARSDYTTDP 793
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
PIG I++ + + ++K+R++ R++L L S+ + + +D ++++ L + +
Sbjct: 794 --PIGNVIISKTAETLRKLRNTARFMLANL-PASDKVAKLDKAKMNLLDRFVMQELYQLE 850
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
Y + +A+ R L F LS Y + KD LY D E R + + I
Sbjct: 851 RACAAAYEVYDFAQVVRRLTEFTNATLSNLYLDVGKDSLYLDESANERRQMIVAVVDQIL 910
Query: 995 HVLLRTVAPIMPHLAEEVY 1013
+ +API P L EE++
Sbjct: 911 RTMTGIMAPITPFLCEEIF 929
Score = 329 bits (844), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 182/454 (40%), Positives = 263/454 (57%), Gaps = 61/454 (13%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
CG ELY WQR + +F+ HDGPPYANG H GHA+NKILKDIT R +L+GKRVHY
Sbjct: 114 CG--ELYRWQRSRTSTSGDFVFHDGPPYANGNLHCGHALNKILKDITNRYQVLRGKRVHY 171
Query: 62 VPGWDCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
+PGWDCHGLPIE KA+ + K L DIR++A+N A++ I TQK+EF +G++ADW
Sbjct: 172 MPGWDCHGLPIEAKALANVKPDKRHKLVAHDIRERARNEAIKAIETQKSEFGQFGIMADW 231
Query: 118 EHNC-YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVS 176
++ Y T D Y QL F + ++ IYR +PVYWSPS+RTALAESELEY+ DH+S
Sbjct: 232 SNDATYRTLDPAYEARQLRVFGEMVRKGLIYRQYRPVYWSPSNRTALAESELEYREDHLS 291
Query: 177 KSIYLKIKLNQVPAHLLEGATD------LHALIWTTTPWSLPANQFIAFNPALEYSV--- 227
K++Y+ K+ P L + D L+ +IWTTTPWSLP+N + NP LEYS+
Sbjct: 292 KAVYVAFKMIAGPELLQKLGQDADFDHRLNLIIWTTTPWSLPSNMAVNVNPGLEYSIVRR 351
Query: 228 ASVKGANVIVAKCLVESLKW-------------------TFQTDIEVVCDFPGQYLQDIT 268
A +G +V +E+L+ TF +E V G L D T
Sbjct: 352 AGREGPYYVVGTDRIEALQVLPSSIVVGERDAEGDGKGPTFGP-LEEVARVRGSDLTDST 410
Query: 269 YIHPIN-KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL----ALAEKIPVLNLIT 323
Y P++ + + +L A +V++ GTGLVH APAHG +D+ + + + + +
Sbjct: 411 YRTPLSASDSKPRPILMADYVTAVSGTGLVHSAPAHGAEDYQIWKQQGHIHRDGIFSPVN 470
Query: 324 NQGKYSPDA------------------GPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
++G+YS D G L G ++ +G +V +++ ++ +
Sbjct: 471 DEGRYSSDILQLDAASSAGSSEDDTKLGQRLLGKEVISEGAKEVTAILQERGALISAQTL 530
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+H YPYDWR+K+PVI++A+ QWF + +RIK +A+
Sbjct: 531 RHKYPYDWRSKQPVIVRATAQWFANLDRIKEQAI 564
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 1090 RQGTFSSFCHFKVYH----HLNLITNQGKYSPDA--GPGLEGLNILGEGKDQVLHLVEPD 1143
R G FS Y L+ ++ G D G L G ++ EG +V +++
Sbjct: 462 RDGIFSPVNDEGRYSSDILQLDAASSAGSSEDDTKLGQRLLGKEVISEGAKEVTAILQER 521
Query: 1144 --VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSL 1201
++ + +H YPYDWR+K+PVI++A+ QWF + +RIK +A+ L+ V FVP +++ L
Sbjct: 522 GALISAQTLRHKYPYDWRSKQPVIVRATAQWFANLDRIKEQAIEALQDVTFVPINSRSRL 581
Query: 1202 RDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPV 1259
I R WCISRQRVWGVPIPV YD D ++ NI+H L++ HG D+WW
Sbjct: 582 ESFIMGRSEWCISRQRVWGVPIPVLYDTVTDEPLMTVENIEHIAALLERHGTDYWWKADA 641
Query: 1260 EQLL 1263
E+ +
Sbjct: 642 EEFV 645
>gi|240276584|gb|EER40095.1| isoleucyl-tRNA synthetase [Ajellomyces capsulatus H143]
gi|325095370|gb|EGC48680.1| isoleucyl-tRNA synthetase [Ajellomyces capsulatus H88]
Length = 1020
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 331/640 (51%), Gaps = 46/640 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQF 473
TALAE+ELEYK DH S + +K L +P+ L + T++ A+IWTTTPW+LPAN
Sbjct: 206 TALAEAELEYKEDHKSTAGLVKFPLVSMPSKLRDMLPSNTTEISAVIWTTTPWTLPANAA 265
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFP---GQYLQDITYIHP 529
IA +P LEYSV S K ++V E ++ Q + V P + + + TY+
Sbjct: 266 IAVSPTLEYSVVKSEKHGYLVVGSSRREYVQTLLQGEEVTVMGSPMLGCELVSESTYLPL 325
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
++ A FV++ G+GLVHCAP HG +D+ + A I + + G ++ A
Sbjct: 326 FKDGSVPQPVIAADFVTADSGSGLVHCAPGHGMEDYEVCQAHGIASHTPVDDAGLFTDAA 385
Query: 590 GP----GLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
P L G ++LGDG +VL VE +L Y+H YPYDWR+K PVI++A++QWF
Sbjct: 386 MPLNPSMLSGKSVLGDGNREVLRYVESKGQLLAKHTYEHKYPYDWRSKLPVIVRATEQWF 445
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
D I+ AL LE+V F+P K L I R WCISRQR WGVPIP Y +T
Sbjct: 446 ADVSDIRYYALQALEDVQFIPSMGKSRLESFIKSRSEWCISRQRAWGVPIPALYHRETGE 505
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWS------LSVEQLLNTSDVNSNVTKSNDILDIWFDS 755
I+ + ++ H +IDE G D WW+ + + + + + + D +D+WFDS
Sbjct: 506 AILTKESVSHILKVIDERGIDAWWTDDENDPIWIAASIRETSSGAAYKRGTDTMDVWFDS 565
Query: 756 GISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK---------HTAPFRNV 801
G SW+ V ++ A VY+EG DQ GWF SSLLT VA APF+ +
Sbjct: 566 GSSWTQVKTPASVEGYAADVYLEGTDQHRGWFQSSLLTYVAYNLGLGEKTGISRAPFKTL 625
Query: 802 FLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY 861
HGF +D+ KMSKS+GNVIS I G P K + + A A
Sbjct: 626 ITHGFTLDKDSRKMSKSIGNVISPDQILDGTLLPPLKLKR----MKGQEKKPTAPVFDAL 681
Query: 862 GVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---S 917
G D LR WVA+ +KD + I + +L + ++ K R + + LLG L + S
Sbjct: 682 GTDALRLWVASSDYTKD--IVISQPVLKTVHTNLHKYRVTFKLLLGSLQDFDPSCTVPHE 739
Query: 918 ISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDS 977
R +D L +L + N Y F++ RA + + + SAFY +KDRLY D
Sbjct: 740 SLRIIDKIALLQLRKLINICQDAYSSFEFYRAITAINKWANLDFSAFYIESLKDRLYADC 799
Query: 978 INGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
N +R + TL +I++ +AP++P+L EE + H P
Sbjct: 800 PNSLSRRAAQTTLCHIYYHFQNLLAPLVPNLVEESWEHTP 839
Score = 320 bits (820), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 180/417 (43%), Positives = 243/417 (58%), Gaps = 27/417 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LYSWQ+ + F+LHDGPPYANG H+GHA+NKILKDI R L GKRVHYVPGW
Sbjct: 42 DLYSWQQRHRPNENRFVLHDGPPYANGDLHVGHALNKILKDIICRMQLAAGKRVHYVPGW 101
Query: 66 DCHGLPIELKAITSKDKLLSPLDIRKKAK-----------NFALETINTQKAEFESWGVL 114
DCHGLPIELKA+ ++ K L L+ + A +T+ Q F W V+
Sbjct: 102 DCHGLPIELKALQTQ-KGLGRLEAGRNGNGGAAAIRRAARQLAEKTVLEQMKGFHKWAVM 160
Query: 115 ADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDH 174
ADWE N + T DK + K QL F + ++ I+R KPVYWSPSSRTALAE+ELEYK DH
Sbjct: 161 ADWE-NAWKTMDKSFEKRQLDVFLKMVEKGLIHRRFKPVYWSPSSRTALAEAELEYKEDH 219
Query: 175 VSKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-S 229
S + +K L +P+ L + T++ A+IWTTTPW+LPAN IA +P LEYSV S
Sbjct: 220 KSTAGLVKFPLVSMPSKLRDMLPSNTTEISAVIWTTTPWTLPANAAIAVSPTLEYSVVKS 279
Query: 230 VKGANVIVAKCLVESLKWTFQTDIEVVCDFP---GQYLQDITYIHPINKEQRDLKLLPAG 286
K ++V E ++ Q + V P + + + TY+ ++ A
Sbjct: 280 EKHGYLVVGSSRREYVQTLLQGEEVTVMGSPMLGCELVSESTYLPLFKDGSVPQPVIAAD 339
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP----GLEGLNIL 342
FV++ G+GLVHCAP HG +D+ + A I + + G ++ A P L G ++L
Sbjct: 340 FVTADSGSGLVHCAPGHGMEDYEVCQAHGIASHTPVDDAGLFTDAAMPLNPSMLSGKSVL 399
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
GDG +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+ AL
Sbjct: 400 GDGNREVLRYVESKGQLLAKHTYEHKYPYDWRSKLPVIVRATEQWFADVSDIRYYAL 456
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 83/138 (60%), Gaps = 4/138 (2%)
Query: 1123 LEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
L G ++LG+G +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+
Sbjct: 393 LSGKSVLGDGNREVLRYVESKGQLLAKHTYEHKYPYDWRSKLPVIVRATEQWFADVSDIR 452
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 1238
AL LE V F+P K L I R WCISRQR WGVPIP Y +T I+ + +
Sbjct: 453 YYALQALEDVQFIPSMGKSRLESFIKSRSEWCISRQRAWGVPIPALYHRETGEAILTKES 512
Query: 1239 IKHFCTLIDEHGPDFWWS 1256
+ H +IDE G D WW+
Sbjct: 513 VSHILKVIDERGIDAWWT 530
>gi|378725587|gb|EHY52046.1| isoleucyl-tRNA synthetase [Exophiala dermatitidis NIH/UT8656]
Length = 1036
Score = 370 bits (950), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 240/663 (36%), Positives = 353/663 (53%), Gaps = 79/663 (11%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL---NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
GTALAE+ELEY+ DH+S + +K L + +PAH +HALIWTTTPW+LPANQ
Sbjct: 213 GTALAEAELEYRDDHVSNAALVKFPLLEHDILPAH----EEPIHALIWTTTPWTLPANQA 268
Query: 474 IAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITY--IHP 529
IA + +L+YS V S +IVA + L+ T I ++ + P L TY +
Sbjct: 269 IAIHSSLQYSLVKSATHGLLIVAYARIPYLEETIGEQIQMLVEAIPTDKLLQSTYSGMSE 328
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL----LALAEKIPVLNLITNQGKY 585
+ ++ A FVS+ GTGLVHCAP HG +D+ L ++ V + N G++
Sbjct: 329 FGPGAANRPIIHADFVSAQSGTGLVHCAPGHGMEDYEALQPLIQTSRVAVRAPVDNLGRF 388
Query: 586 SPDAGPGLEGLNILG------DGKDQVLHLVEPDVLWTEN--YQHSYPYDWRTKKPVILK 637
D L NIL +G VL L++ L Y+H YP DWRTK+PV+++
Sbjct: 389 --DNTASLTDPNILAGKYAFKEGNQAVLDLLQRHGLLVHRHEYRHKYPIDWRTKEPVMIR 446
Query: 638 ASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY 697
A+ QWF D RI+ + L LE V+F+PE+ + LR + R WCISRQR WGVPIP Y
Sbjct: 447 ATAQWFADISRIRNDTLHALEAVHFLPETGRSRLRSFVENRSEWCISRQRAWGVPIPAIY 506
Query: 698 DGDT--IIVNEANIKHFCTLIDEHGPDFWWSLS-------VEQLLNTSDVNSNVTKSNDI 748
DT ++ ++ H +I++ G D WWS + + +L+++ +S + D
Sbjct: 507 HKDTGEAVLTSESVGHIIKVIEQRGIDAWWSDAHDDPAWILPELVSSG--SSEYVRGMDT 564
Query: 749 LDIWFDSGISWSHVLKD-----KP-------AHVYMEGMDQINGWFMSSLLTSVALKHT- 795
+D+WFDSG SW+ +LKD +P A VY+EG DQ GWF SSLLT+VA + T
Sbjct: 565 MDVWFDSGTSWTFMLKDVNGSIQPRTQSAPLADVYVEGSDQHRGWFQSSLLTNVAYQKTL 624
Query: 796 -------------APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSV 842
APFR + HGF +DE G KMSKS+GN I+ I G + A K+
Sbjct: 625 QQNATASDPVSCHAPFRVLATHGFTLDEHGKKMSKSLGNTIAPDQIITG---IEAASKTS 681
Query: 843 GNVISAHDITQGAKKLPAYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSL 901
T+G ++ G D LR WVA+ +KD V I + +++S + + K R ++
Sbjct: 682 SATAKTPPKTKGKREHHPLGPDALRMWVASSEWTKD--VVISEVVISSVHNALDKYRLTM 739
Query: 902 RYLLGVLHNHS-------ESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLL 954
+ LLG+L + E+ + + V + L ++C+ ++ Y + ++ +A+ +
Sbjct: 740 KMLLGMLGDFDPRMLVPYENMSCLDQ-VAMLHLYKVCQ---SVRKAYSDLEFHKAASAMN 795
Query: 955 NFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
+VV +LS+FYF VKD +YCD RLS LH+IF + PI P L EE +
Sbjct: 796 KWVVADLSSFYFEAVKDIIYCDKQESPRRLSAQTALHHIFSQFQHMLGPIAPLLVEESWE 855
Query: 1015 HLP 1017
H P
Sbjct: 856 HSP 858
Score = 317 bits (812), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/447 (41%), Positives = 253/447 (56%), Gaps = 44/447 (9%)
Query: 6 ELYSWQRE------------ALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNL 53
+LY+WQR+ N F+LHDGPPYANG H+GHA+NKI+KDI RS L
Sbjct: 42 DLYAWQRQHRPANATNTPDSTNNSNSTFVLHDGPPYANGELHVGHALNKIIKDIICRSRL 101
Query: 54 LQGKRVHYVPGWDCHGLPIELKAITSK------DKLLSPLDIRKKAKNFALETINTQKAE 107
+GKR+ YVPGWDCHGLPIELKA+ + + P+ IRK A+ FA +T+ Q A
Sbjct: 102 AEGKRIDYVPGWDCHGLPIELKALEQHGWERGLGQGVDPVAIRKAARKFAYKTVEKQMAG 161
Query: 108 FESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESE 167
F SW V+ADW+ N + T DK + QL F ++ + IYR KPVYWSPSS TALAE+E
Sbjct: 162 FRSWAVMADWQ-NHWKTMDKSFELRQLAVFQSMAQHGLIYRKNKPVYWSPSSGTALAEAE 220
Query: 168 LEYKPDHVSKSIYLKIKL---NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALE 224
LEY+ DHVS + +K L + +PAH +HALIWTTTPW+LPANQ IA + +L+
Sbjct: 221 LEYRDDHVSNAALVKFPLLEHDILPAH----EEPIHALIWTTTPWTLPANQAIAIHSSLQ 276
Query: 225 YS-VASVKGANVIVAKCLVESLKWTFQTDIEVVCD-FPGQYLQDITY--IHPINKEQRDL 280
YS V S +IVA + L+ T I+++ + P L TY + +
Sbjct: 277 YSLVKSATHGLLIVAYARIPYLEETIGEQIQMLVEAIPTDKLLQSTYSGMSEFGPGAANR 336
Query: 281 KLLPAGFVSSSKGTGLVHCAPAHGQDDFL----LALAEKIPVLNLITNQGKYSPDAGPGL 336
++ A FVS+ GTGLVHCAP HG +D+ L ++ V + N G++ D L
Sbjct: 337 PIIHADFVSAQSGTGLVHCAPGHGMEDYEALQPLIQTSRVAVRAPVDNLGRF--DNTASL 394
Query: 337 EGLNILG------DGKDQVLHLVEPDVLWTEN--YQHSYPYDWRTKKPVILKASQQWFID 388
NIL +G VL L++ L Y+H YP DWRTK+PV+++A+ QWF D
Sbjct: 395 TDPNILAGKYAFKEGNQAVLDLLQRHGLLVHRHEYRHKYPIDWRTKEPVMIRATAQWFAD 454
Query: 389 TERIKPEALVCKTVGNILGRVGITHDR 415
RI+ + L + L G + R
Sbjct: 455 ISRIRNDTLHALEAVHFLPETGRSRLR 481
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 12/158 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILG------EGKDQVLHLVEPDVLWTEN--YQHSYPYDWRT 1160
+ N G++ D L NIL EG VL L++ L Y+H YP DWRT
Sbjct: 382 VDNLGRF--DNTASLTDPNILAGKYAFKEGNQAVLDLLQRHGLLVHRHEYRHKYPIDWRT 439
Query: 1161 KKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWG 1220
K+PV+++A+ QWF D RI+ + L LE V+F+PE+ + LR + R WCISRQR WG
Sbjct: 440 KEPVMIRATAQWFADISRIRNDTLHALEAVHFLPETGRSRLRSFVENRSEWCISRQRAWG 499
Query: 1221 VPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
VPIP Y DT ++ ++ H +I++ G D WWS
Sbjct: 500 VPIPAIYHKDTGEAVLTSESVGHIIKVIEQRGIDAWWS 537
Score = 41.6 bits (96), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%)
Query: 1041 KRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
K I+YCD RLS LH+IF + PI P L EE + H P
Sbjct: 811 KDIIYCDKQESPRRLSAQTALHHIFSQFQHMLGPIAPLLVEESWEHSP 858
>gi|420143358|ref|ZP_14650859.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactococcus
garvieae IPLA 31405]
gi|391856877|gb|EIT67413.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactococcus
garvieae IPLA 31405]
Length = 928
Score = 370 bits (950), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 224/643 (34%), Positives = 339/643 (52%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K V L E D+ +IWTTTPW+LPAN I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDVKGRLPE---DVEFVIWTTTPWTLPANMGIFVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P EYSV V ++A ++ E L+W T V+ G + +T HP
Sbjct: 247 PDYEYSVVKVGSRKFVIASEMLSKVAEILEWENPT---VLQTLKGSDMDMMTAHHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ +V+ GTGLVH AP HG+DD+ + K+ VL+ + N+G Y+ D PGL
Sbjct: 302 DRESLIMNGDYVTLDSGTGLVHSAPGHGEDDYFFSRKYKLEVLSPVDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ +G V +E +L + + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGV-FYDEGNKIVSKWLEEKGALLKLDFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRE 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
L+ +E+V+++ K L + + R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 420 NILSEIEQVDWIIPWGKTRLYNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITPETT- 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L EHG W ++LL + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 EHVAQLFAEHGSKVWVEREAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSWNGVLN 538
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SS+ TSVA+ +P++ V GFV+D KG KMSKS+
Sbjct: 539 ERDYLSYPADLYLEGSDQYRGWFNSSITTSVAVNGVSPYKAVLSQGFVLDGKGRKMSKSI 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I D+T KL G D+LR WVA+ +
Sbjct: 599 GNTILPSDVT--------------------------GKL---GADILRLWVAS-VDTEAD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + ILN + +KIR+++R+L+ + ++T ++S R VD YML +
Sbjct: 629 VRVSMEILNQVSEVYRKIRNTMRFLIANTTDFDKNTNAVSYENLRSVDKYMLVKFNTLVK 688
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y + + + ++NF+ N+LSAFY KD +Y ++ N R S ++ +
Sbjct: 689 AVREAYDSYNFMSVYKQVINFLTNDLSAFYLDFAKDVVYIEAANAADRRSMQTVMYTMLA 748
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L + + PI+PH AEE++S+L + F+ ++GS
Sbjct: 749 DLTKLLVPILPHTAEEIWSYLEAETEEFAYLAEMPEVKDFTGS 791
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/395 (42%), Positives = 234/395 (59%), Gaps = 21/395 (5%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ALN GKP F+LHDGPPYANG H+GHA+NKI KDI +R + G R YVPGWD HGL
Sbjct: 40 RQALNEGKPSFMLHDGPPYANGNIHVGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGL 99
Query: 71 PIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE L K + LD ++ + +AL+ ++ Q+++F+S GVLADWE Y T E
Sbjct: 100 PIEQQLSKAGMNRKEMDMLDYLEECRKYALKQVDMQRSDFKSLGVLADWER-PYMTLLPE 158
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
Y Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++ K V
Sbjct: 159 YEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVAFKAKDV 217
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV----ES 244
L E D+ +IWTTTPW+LPAN I +P EYSV V ++A ++ E
Sbjct: 218 KGRLPE---DVEFVIWTTTPWTLPANMGIFVHPDYEYSVVKVGSRKFVIASEMLSKVAEI 274
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
L+W T V+ G + +T HP R+ ++ +V+ GTGLVH AP HG
Sbjct: 275 LEWENPT---VLQTLKGSDMDMMTAHHPFY--DRESLIMNGDYVTLDSGTGLVHSAPGHG 329
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTEN 362
+DD+ + K+ VL+ + N+G Y+ D PGLEG+ +G V +E +L +
Sbjct: 330 EDDYFFSRKYKLEVLSPVDNRGYYT-DEAPGLEGV-FYDEGNKIVSKWLEEKGALLKLDF 387
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 388 FTHSYPHDWRTKKPVIFRATPQWFASIDDFRENIL 422
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + N+G Y+ D PGLEG+ EG V +E +L + + HSYP+DWRTKKP
Sbjct: 344 LSPVDNRGYYT-DEAPGLEGV-FYDEGNKIVSKWLEEKGALLKLDFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L+ +E V+++ K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRENILSEIEQVDWIIPWGKTRLYNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E +H L EHG W ++LL
Sbjct: 462 PIFYAENGEAIITPETT-EHVAQLFAEHGSKVWVEREAKELL 502
>gi|293376235|ref|ZP_06622478.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
gi|292645127|gb|EFF63194.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
Length = 911
Score = 370 bits (950), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 227/618 (36%), Positives = 331/618 (53%), Gaps = 55/618 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY D S SIY+ K+ L A D +IWTTTPW++PAN I N
Sbjct: 192 TALAEAEIEYH-DKKSPSIYVAFKVQDGKGIL---AGDEEFVIWTTTPWTIPANLGICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
LEY +V IVAK LVE+L + +++ + G + +T HP+ R+
Sbjct: 248 ADLEYVTVAVNDRKFIVAKELVESLSKELNWETYEILATYKGSDFEYMTAKHPLF--DRE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L+ V+ GTGLVH AP HG+DDF + VL + +G + DA EG+
Sbjct: 306 SLLILGDHVTLDAGTGLVHTAPGHGEDDFNAGRKYNLEVLCPVDYRGYMTKDAFE-FEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A++QWF E +K + +
Sbjct: 365 YYEDANKAVGQKLEEKGALLGLKFITHSYPHDWRTKKPIIFRATEQWFASIEALKGQMME 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++EVN++P + L + I R WCISRQRVWGVPIPVFY DG+ I+ +E+ I H
Sbjct: 425 QIKEVNWLPAWGEVRLGNMIKDRADWCISRQRVWGVPIPVFYAEDGEAIL-DESVINHVA 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L E G + W+ L E+LL + N K DI+D+WFDSG S VL ++
Sbjct: 484 NLFREKGSNIWFELEAEELLPAGFTHPGSPNGKFRKETDIMDVWFDSGSSHHSVLVERGL 543
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSL T VA+ AP++ V HGFV+D +G KMSKS+GNVI
Sbjct: 544 PYPADLYLEGSDQYRGWFNSSLSTGVAMTGRAPYKTVVSHGFVLDGQGRKMSKSIGNVID 603
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
K + YG D++R WVA+ V I +
Sbjct: 604 P-----------------------------LKLIKIYGADIVRLWVAS-VDYQADVRISE 633
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTL 940
+++ + +K+R++ R+LLG L + + T ++ VD +M+ RL E + +
Sbjct: 634 DLIKQVAESYRKMRNTFRFLLGNLFDFNPETDLVAYEDLNEVDQFMMIRLNELTKELKSA 693
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y E+++ + + N++ N+LSAFY KD LY + + +AR S L++ + + R
Sbjct: 694 YEEYRFDDVFKTVNNYISNDLSAFYLDFTKDILYIEKADSQARRSIQTVLYHHVYDMCRL 753
Query: 1001 VAPIMPHLAEEVYSHLPS 1018
+AP++PH A+EVYS++P
Sbjct: 754 LAPVIPHTADEVYSYIPG 771
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 222/400 (55%), Gaps = 17/400 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY E K F+LHDGPPYANG H+GHA+NKILKD +R + G Y+PG
Sbjct: 34 EKLYEKVLEKNQDKTPFVLHDGPPYANGNIHMGHALNKILKDFVVRFKNMDGYYAPYIPG 93
Query: 65 WDCHGLPIEL-----KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
WD HGLPIE K + K+K ++ + R+ K +ALE + QK +F+ GVL DW+
Sbjct: 94 WDTHGLPIEQALTNNKKVNRKEKTVA--EFRELCKEYALEQVEGQKTQFKRLGVLGDWD- 150
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N Y T KEY Q+ F + K+ IY+ LKP+YWSPSS TALAE+E+EY D S SI
Sbjct: 151 NPYITLQKEYEAQQILVFGKMVKEGLIYKGLKPIYWSPSSETALAEAEIEYH-DKKSPSI 209
Query: 180 YLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
Y+ K+ L A D +IWTTTPW++PAN I N LEY +V IVAK
Sbjct: 210 YVAFKVQDGKGIL---AGDEEFVIWTTTPWTIPANLGICVNADLEYVTVAVNDRKFIVAK 266
Query: 240 CLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
LVESL + E++ + G + +T HP+ R+ L+ V+ GTGLVH
Sbjct: 267 ELVESLSKELNWETYEILATYKGSDFEYMTAKHPLF--DRESLLILGDHVTLDAGTGLVH 324
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DDF + VL + +G + DA EG+ K L E L
Sbjct: 325 TAPGHGEDDFNAGRKYNLEVLCPVDYRGYMTKDAFE-FEGMYYEDANKAVGQKLEEKGAL 383
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A++QWF E +K + +
Sbjct: 384 LGLKFITHSYPHDWRTKKPIIFRATEQWFASIEALKGQMM 423
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKP+I +A++QWF E +K + + ++ VN++P + L + I R W
Sbjct: 391 HSYPHDWRTKKPIIFRATEQWFASIEALKGQMMEQIKEVNWLPAWGEVRLGNMIKDRADW 450
Query: 1212 CISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
CISRQRVWGVPIPVFY DG+ I+ +E+ I H L E G + W+ L E+LL
Sbjct: 451 CISRQRVWGVPIPVFYAEDGEAIL-DESVINHVANLFREKGSNIWFELEAEELL 503
>gi|320585805|gb|EFW98484.1| isoleucyl-tRNA synthetase [Grosmannia clavigera kw1407]
Length = 979
Score = 370 bits (950), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 218/639 (34%), Positives = 339/639 (53%), Gaps = 49/639 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEG--ATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H+S + +++ + L L G L A+IWTTTPW+LPAN+
Sbjct: 189 TALAEAELEYSDRHLSTAAFVQFPIVGGVGRLDCLAGLRPGPLSAVIWTTTPWTLPANEA 248
Query: 474 IAFNPALEYSVASVKGAN------VIVAKCLVENLKWTFQTDIDVVCD-----FPGQYLQ 522
IA + L+Y+V ++ + ++VA+ +E + D++ D PG L
Sbjct: 249 IAVHRDLDYAVVRIRTDSSDAPEYLLVAEACLETFSSMCCREPDMLSDVVARAIPGSDLL 308
Query: 523 DITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y++ + + + ++ A FV++ G+GLVH AP HG +D+ + ++ +PV +
Sbjct: 309 GLQYVNSLRGRSAQPQPIIHASFVTAGSGSGLVHIAPGHGFEDYEVGMSHGLPVPAPVDG 368
Query: 582 QGKYS----PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 637
+G+++ PD L GL++ G+G VL L+ VL T YQH YPYDWRTKKP+I++
Sbjct: 369 EGRFTDAAFPDEPARLTGLSVQGEGGTAVLALLGSAVLATHRYQHKYPYDWRTKKPIIVR 428
Query: 638 ASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY 697
A+ QWF D IK A+A L+ V FVPE+ + L + R WCISRQR WGVPIP
Sbjct: 429 ATAQWFADVAEIKAAAVASLQTVQFVPEAGRSRLESFVQGRSEWCISRQRAWGVPIPALL 488
Query: 698 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ--LLNTSDVNSNVT--KSNDILDIW 752
D ++++ EA ++H ++ + G D WWS ++ + ++S VT +S D +D+W
Sbjct: 489 GDDGSVVLTEATVEHIVDVVRKRGTDAWWSDPADEPAWIPAELLHSGVTYRRSTDTMDVW 548
Query: 753 FDSGISWSHVLKDKPAHVYMEGMDQINGWFMSSLLTSVAL----------KHTAPFRNVF 802
FDSG SW+ A VY+EG DQ GWF SSLLT VA + APF+ +
Sbjct: 549 FDSGSSWTQANDGAQADVYLEGTDQHRGWFQSSLLTRVAALGDSDLQPDDQSLAPFKTLV 608
Query: 803 LHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY- 861
HGF++D G KMSKS+GN++ ++ G P + + + T GA P Y
Sbjct: 609 THGFLLDGDGKKMSKSLGNIVLPAEVMDGTLLPPLKPRKGRSKKTEKTETTGAPGAPVYD 668
Query: 862 --GVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS 919
G D LR WVA V + + +L + + + R+ ++ LLG +H + +
Sbjct: 669 ALGPDALRLWVATSDYTGDVV-LSQAVLQAVHTTLTRYRTMIKMLLGSMHESARIAPLTT 727
Query: 920 RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSIN 979
+D + +L + + + F++ + + ++ N+LSAFY KDRLYC
Sbjct: 728 --LDHMAVLQLRDAMADVAAAFARFEFYKGMAGINRWLANDLSAFYLEAAKDRLYCADGG 785
Query: 980 GEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
G L IF L+R +AP++P L EE + H P+
Sbjct: 786 G--------VLEPIFLGLMRMLAPVVPMLVEEAWDHAPA 816
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/413 (42%), Positives = 250/413 (60%), Gaps = 21/413 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ F++HDGPPYANGT H+GHA+NKILKD++LR L QG+RV YVPGW
Sbjct: 35 DLYRWQEAHRPAHRPFVVHDGPPYANGTLHVGHALNKILKDMSLRVQLQQGRRVRYVPGW 94
Query: 66 DCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTF 125
DCHGLPIELKA+ + SP+ IRK A++ A T+ Q EF +GV+ADW+ + T
Sbjct: 95 DCHGLPIELKALAAFPASPSPVAIRKAARDLAARTVLEQMREFRRFGVMADWDGR-WRTM 153
Query: 126 DKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL 185
D Y QL F L + IYR KPVYWSPSSRTALAE+ELEY H+S + +++ +
Sbjct: 154 DAAYEVRQLRLFQQLVHKGLIYRRYKPVYWSPSSRTALAEAELEYSDRHLSTAAFVQFPI 213
Query: 186 NQVPAHL--LEG--ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN------V 235
L L G L A+IWTTTPW+LPAN+ IA + L+Y+V ++ + +
Sbjct: 214 VGGVGRLDCLAGLRPGPLSAVIWTTTPWTLPANEAIAVHRDLDYAVVRIRTDSSDAPEYL 273
Query: 236 IVAKCLVESLKWTFQTDIEVVCD-----FPGQYLQDITYIHPI-NKEQRDLKLLPAGFVS 289
+VA+ +E+ + +++ D PG L + Y++ + + + ++ A FV+
Sbjct: 274 LVAEACLETFSSMCCREPDMLSDVVARAIPGSDLLGLQYVNSLRGRSAQPQPIIHASFVT 333
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS----PDAGPGLEGLNILGDG 345
+ G+GLVH AP HG +D+ + ++ +PV + +G+++ PD L GL++ G+G
Sbjct: 334 AGSGSGLVHIAPGHGFEDYEVGMSHGLPVPAPVDGEGRFTDAAFPDEPARLTGLSVQGEG 393
Query: 346 KDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
VL L+ VL T YQH YPYDWRTKKP+I++A+ QWF D IK A+
Sbjct: 394 GTAVLALLGSAVLATHRYQHKYPYDWRTKKPIIVRATAQWFADVAEIKAAAVA 446
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 97/158 (61%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYS----PDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
+ +G+++ PD L GL++ GEG VL L+ VL T YQH YPYDWRTKKP+
Sbjct: 366 VDGEGRFTDAAFPDEPARLTGLSVQGEGGTAVLALLGSAVLATHRYQHKYPYDWRTKKPI 425
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I++A+ QWF D IK A+A L+ V FVPE+ + L + R WCISRQR WGVPIP
Sbjct: 426 IVRATAQWFADVAEIKAAAVASLQTVQFVPEAGRSRLESFVQGRSEWCISRQRAWGVPIP 485
Query: 1225 VFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQ 1261
D ++++ EA ++H ++ + G D WWS P ++
Sbjct: 486 ALLGDDGSVVLTEATVEHIVDVVRKRGTDAWWSDPADE 523
>gi|325845145|ref|ZP_08168454.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
gi|325488810|gb|EGC91210.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
Length = 911
Score = 369 bits (948), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 227/618 (36%), Positives = 331/618 (53%), Gaps = 55/618 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY D S SIY+ K+ L A D +IWTTTPW++PAN I N
Sbjct: 192 TALAEAEIEYH-DKKSPSIYVAFKVQDGKGIL---AGDEEFVIWTTTPWTIPANLGICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
LEY +V IVAK LVE+L + +++ + G + +T HP+ R+
Sbjct: 248 ADLEYVTVAVNDRKFIVAKELVESLSKEVNWETYEILATYKGSDFEYMTAKHPLF--DRE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L+ V+ GTGLVH AP HG+DDF + VL + +G + DA EG+
Sbjct: 306 SLLILGDHVTLDAGTGLVHTAPGHGEDDFNAGRKYNLEVLCPVDYRGYMTKDAFE-FEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A++QWF E +K + +
Sbjct: 365 YYEDANKAVGQKLEEKGALLGLKFITHSYPHDWRTKKPIIFRATEQWFASIEALKGQMME 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++EVN++P + L + I R WCISRQRVWGVPIPVFY DG+ I+ +E+ I H
Sbjct: 425 QIKEVNWLPAWGEVRLGNMIKDRADWCISRQRVWGVPIPVFYAEDGEAIL-DESVINHVA 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L E G + W+ L E+LL + N K DI+D+WFDSG S VL ++
Sbjct: 484 NLFREKGSNIWFELEAEELLPAGFTHPGSPNGKFRKETDIMDVWFDSGSSHHSVLVERGL 543
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSL T VA+ AP++ V HGFV+D +G KMSKS+GNVI
Sbjct: 544 PYPADLYLEGSDQYRGWFNSSLSTGVAMTGRAPYKTVVSHGFVLDGQGRKMSKSIGNVID 603
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
K + YG D++R WVA+ V I +
Sbjct: 604 P-----------------------------LKLIKIYGADIVRLWVAS-VDYQADVRISE 633
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTL 940
+++ + +K+R++ R+LLG L + + T ++ VD +M+ RL E + +
Sbjct: 634 DLIKQVAESYRKMRNTFRFLLGNLFDFNPETDLVAYEDLNEVDQFMMIRLNELTKELKSA 693
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y E+++ + + N++ N+LSAFY KD LY + + +AR S L++ + + R
Sbjct: 694 YEEYRFDDVFKTVNNYISNDLSAFYLDFTKDILYIEKADSQARRSIQTILYHHVYDMCRL 753
Query: 1001 VAPIMPHLAEEVYSHLPS 1018
+AP++PH A+EVYS++P
Sbjct: 754 LAPVIPHTADEVYSYIPG 771
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 222/400 (55%), Gaps = 17/400 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY E K F+LHDGPPYANG H+GHA+NKILKD +R + G Y+PG
Sbjct: 34 EKLYEKVLEKNQDKTPFVLHDGPPYANGNIHMGHALNKILKDFVVRFKNMDGYYAPYIPG 93
Query: 65 WDCHGLPIEL-----KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
WD HGLPIE K + K+K ++ + R+ K +ALE + QK +F+ GVL DW+
Sbjct: 94 WDTHGLPIEQALTNNKKVNRKEKTVA--EFRELCKEYALEQVEGQKTQFKRLGVLGDWD- 150
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N Y T KEY Q+ F + K+ IY+ LKP+YWSPSS TALAE+E+EY D S SI
Sbjct: 151 NPYITLQKEYEAQQILVFGKMVKEGLIYKGLKPIYWSPSSETALAEAEIEYH-DKKSPSI 209
Query: 180 YLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
Y+ K+ L A D +IWTTTPW++PAN I N LEY +V IVAK
Sbjct: 210 YVAFKVQDGKGIL---AGDEEFVIWTTTPWTIPANLGICVNADLEYVTVAVNDRKFIVAK 266
Query: 240 CLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
LVESL + E++ + G + +T HP+ R+ L+ V+ GTGLVH
Sbjct: 267 ELVESLSKEVNWETYEILATYKGSDFEYMTAKHPLF--DRESLLILGDHVTLDAGTGLVH 324
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DDF + VL + +G + DA EG+ K L E L
Sbjct: 325 TAPGHGEDDFNAGRKYNLEVLCPVDYRGYMTKDAFE-FEGMYYEDANKAVGQKLEEKGAL 383
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A++QWF E +K + +
Sbjct: 384 LGLKFITHSYPHDWRTKKPIIFRATEQWFASIEALKGQMM 423
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKP+I +A++QWF E +K + + ++ VN++P + L + I R W
Sbjct: 391 HSYPHDWRTKKPIIFRATEQWFASIEALKGQMMEQIKEVNWLPAWGEVRLGNMIKDRADW 450
Query: 1212 CISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
CISRQRVWGVPIPVFY DG+ I+ +E+ I H L E G + W+ L E+LL
Sbjct: 451 CISRQRVWGVPIPVFYAEDGEAIL-DESVINHVANLFREKGSNIWFELEAEELL 503
>gi|421765862|ref|ZP_16202642.1| Isoleucyl-tRNA synthetase [Lactococcus garvieae DCC43]
gi|407625632|gb|EKF52327.1| Isoleucyl-tRNA synthetase [Lactococcus garvieae DCC43]
Length = 928
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 224/634 (35%), Positives = 335/634 (52%), Gaps = 64/634 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K V L E D +IWTTTPW+LPAN I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDVKGVLPE---DAEFVIWTTTPWTLPANMGIFVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P EYSV V +VA ++ E L+W T + V G + +T HP
Sbjct: 247 PDYEYSVVEVGERKFVVASEMLSKVAETLEWENPTVLQTV---KGSEMDMMTAQHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ +V+ GTGLVH AP HG+DD+ + K+ VL+ + N+G Y+ D PGL
Sbjct: 302 DRESLVMNGDYVTLDSGTGLVHSAPGHGEDDYFFSRKYKLEVLSPVDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ +G V +E +L + + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGI-FYDEGNKVVSKWLEEKGALLKLDFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRE 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
L +E+V+++ K L + + R W ISRQR WGVP+P+FY +G+ II E I
Sbjct: 420 NILREIEQVDWIIPWGKTRLYNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TI 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L EHG W + LL + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 EHVANLFAEHGSKVWVEREAKDLLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSWNGVLN 538
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SS+ TSVA+ +P++ V GFV+D KG KMSKS+
Sbjct: 539 ERDYLSYPADLYLEGSDQYRGWFNSSITTSVAVNGISPYKAVLSQGFVLDGKGRKMSKSI 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I D+T KL G D+LR WVA+ +
Sbjct: 599 GNTILPSDVT---GKL--------------------------GADILRLWVAS-VDTEAD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + ILN + +KIR+++R+L+ + ++ ++S R VD YML + E
Sbjct: 629 VRVSMEILNQVSEVYRKIRNTMRFLIANTSDFDKNRDTVSYEKLRSVDKYMLVKFNELVK 688
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ Y + + + ++NF+ N+LSAFY KD +Y ++ N R S ++ +
Sbjct: 689 SVREAYDSYNFMSVYKQIINFLTNDLSAFYLDFAKDVVYIEAANSADRRSMQTVMYTMLA 748
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
L + + PI+PH AEE++S+L + + F+
Sbjct: 749 GLTKLLVPIIPHTAEEIWSYLEAEEEKFAYLAEM 782
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/401 (41%), Positives = 237/401 (59%), Gaps = 20/401 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP F+LHDGPPYANG H+GHA+NKI KDI +R + G R YVPG
Sbjct: 34 AKLYEARQELNEGKPSFMLHDGPPYANGNIHVGHALNKISKDIIVRYKSMSGFRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K + LD ++ + +AL+ ++ Q+++F+S GVLADW+ Y
Sbjct: 94 WDTHGLPIEQQLSKAGMNRKEMDMLDYLEECRKYALKQVDMQRSDFKSLGVLADWDR-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++
Sbjct: 153 MTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K V L E D +IWTTTPW+LPAN I +P EYSV V +VA ++
Sbjct: 212 FKAKDVKGVLPE---DAEFVIWTTTPWTLPANMGIFVHPDYEYSVVEVGERKFVVASEML 268
Query: 243 ----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L+W T ++ V G + +T HP R+ ++ +V+ GTGLVH
Sbjct: 269 SKVAETLEWENPTVLQTV---KGSEMDMMTAQHPFY--DRESLVMNGDYVTLDSGTGLVH 323
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-- 356
AP HG+DD+ + K+ VL+ + N+G Y+ D PGLEG+ +G V +E
Sbjct: 324 SAPGHGEDDYFFSRKYKLEVLSPVDNRGYYT-DEAPGLEGI-FYDEGNKVVSKWLEEKGA 381
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L + + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 382 LLKLDFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRENIL 422
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + N+G Y+ D PGLEG+ EG V +E +L + + HSYP+DWRTKKP
Sbjct: 344 LSPVDNRGYYT-DEAPGLEGI-FYDEGNKVVSKWLEEKGALLKLDFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L +E V+++ K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRENILREIEQVDWIIPWGKTRLYNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E I+H L EHG W + LL
Sbjct: 462 PIFYAENGEAIITPE-TIEHVANLFAEHGSKVWVEREAKDLL 502
>gi|422939826|ref|ZP_16967197.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339890810|gb|EGQ79880.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 933
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 213/622 (34%), Positives = 340/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ANFDYGLYKTEKGNLILAKDLAESAFKDIGIKNFELIKEFKGKDLEYTTYKHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++ LA K+PV++ I ++G + +AG +GL
Sbjct: 313 GLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + +L + +L + HSYP+DWR+K PVI +A++QWFI E ++
Sbjct: 373 VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W S E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNT 936
I NIL + ++IR++ RY+LG ++ + T I +D + L +L + +
Sbjct: 643 RISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKILYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKESVARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ AEE++ LP+
Sbjct: 763 LTKMIAPILSFTAEEIWESLPA 784
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 233/376 (61%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG H GHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHTGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SK + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVSKAREMSALEIRKLCEKYAKKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DH S SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNANFDYGLYKTEKGNLILAKDLAESAFKDIGIKNFEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQ+D+++ LA K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + +L + +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + +L + +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLRERTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKSPEELI 514
>gi|384045142|ref|YP_005493159.1| Isoleucyl-tRNA synthetase 1 [Bacillus megaterium WSH-002]
gi|345442833|gb|AEN87850.1| Isoleucyl-tRNA synthetase 1 [Bacillus megaterium WSH-002]
Length = 921
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 327/618 (52%), Gaps = 54/618 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + L + D +IWTTTPW++PANQ IA N
Sbjct: 192 SALAEAEIEYY-DKRSASIYVAFNVKDGKGVLEQ---DEKFIIWTTTPWTMPANQGIAVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+YSV GA +VA L+E + + D + G L+ + HPI K RD
Sbjct: 248 PELQYSVVEADGAKYVVATELIETVAKEIEWADYKTLRTVKGSELERVVAEHPIYK--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 306 SLVVLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDSKGHMTNEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLLK 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCT 714
+E+ +VP + L + + R WCISRQR WGVPIPVFY + D I+ + I+H
Sbjct: 425 AVEKTEWVPTWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYAENDEPIITDETIEHVSN 484
Query: 715 LIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
L EHG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 485 LFREHGSNVWFEREAKDLLPEGFTHEGSPNGRFTKETDIMDVWFDSGSSHQAVLEEREDL 544
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSL TSVA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 545 QRPADLYLEGSDQYRGWFNSSLSTSVAVTGEAPYKGVLSHGFALDGEGRKMSKSLGNVV- 603
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+P K + G D+LR WVA+ V +
Sbjct: 604 ----------IPE------------------KVMKQLGADILRLWVAS-VDYQADVRVSD 634
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTL 940
NIL + +KIR++ R+LLG L + + +T +++ R VD YML +L + + +
Sbjct: 635 NILKQVAEVYRKIRNTFRFLLGNLADFNPTTDAVAVEDLREVDRYMLVKLNKLIDKVKKS 694
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y ++++ + NF ++S+FY KD LY ++ N R S L+ L +
Sbjct: 695 YDSYEFSSIYHAVHNFCTIDMSSFYLDFAKDVLYIEAENNVERRSIQTVLYETLLSLTKL 754
Query: 1001 VAPIMPHLAEEVYSHLPS 1018
V+PI+ H A+EV+ H+P+
Sbjct: 755 VSPILSHTADEVWVHIPN 772
Score = 287 bits (735), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 228/396 (57%), Gaps = 13/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y ++ G+P F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGWD
Sbjct: 36 IYEKVQKRTEGRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +K K ++ + RK + +A E +N Q+ +F+ GV DW+ N Y
Sbjct: 96 THGLPIETALTKNKKVNRKEMTVAEFRKLCEQYAWEQVNGQREQFKRLGVRGDWD-NPYV 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T +Y Q+ F ++ K+ YIY+ LKPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 155 TLQPQYEAQQIKVFGDMAKKGYIYKGLKPVYWSPSSESALAEAEIEYY-DKRSASIYVAF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L + D +IWTTTPW++PANQ IA NP L+YSV GA +VA L+E
Sbjct: 214 NVKDGKGVLEQ---DEKFIIWTTTPWTMPANQGIAVNPELQYSVVEADGAKYVVATELIE 270
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ + D + + G L+ + HPI K RD ++ V++ GTG VH AP
Sbjct: 271 TVAKEIEWADYKTLRTVKGSELERVVAEHPIYK--RDSLVVLGDHVTTDAGTGCVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L +
Sbjct: 329 HGEDDFIVGQKYGLEVLCPVDSKGHMTNEA-PGFEGLFYDKANKPITDKLEEEGALLKLS 387
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 388 FITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLL 423
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L ++ HSYP+DWRTKKP I +
Sbjct: 348 VDSKGHMTNEA-PGFEGLFYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L +E +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKDFREDLLKAVEKTEWVPTWGETRLYNMVRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ D I+ + I+H L EHG + W+ + LL
Sbjct: 467 AENDEPIITDETIEHVSNLFREHGSNVWFEREAKDLL 503
>gi|152991025|ref|YP_001356747.1| isoleucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
gi|166229752|sp|A6Q4I1.1|SYI_NITSB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|151422886|dbj|BAF70390.1| isoleucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
Length = 918
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 339/627 (54%), Gaps = 67/627 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY+ D +S SIY+ KL++ + + +IWTTTPW+LPAN IA N
Sbjct: 193 TALAEAEVEYE-DKVSPSIYVAFKLDKEAVQKI--GKEASIIIWTTTPWTLPANTGIALN 249
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P +EY + S +VA L++ LK DV + L+++ I+P+N R
Sbjct: 250 PDIEYVLTS---DGYVVAADLLDELKEKGIVKGDVEKSISPKDLENLHAINPLN--GRRS 304
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA------GP 591
+++ V++ GTG VH AP HG+DD+ + L + VL + + G+Y
Sbjct: 305 RIVLGEHVTTESGTGAVHTAPGHGEDDYRVGLKYDLEVLMPVDDAGRYDETIVREKLLPE 364
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER--- 648
G+N+ + D++ L+ +L E+ +HSYP+ WRT KP+I +A++QWFI ++
Sbjct: 365 EFVGMNVF-EANDKICELLGDALLKKEDIKHSYPHCWRTHKPIIFRATKQWFIAVDKAPK 423
Query: 649 -----IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
++ AL +E+ F PE + L+ I RP WCISRQR WGVPI F + T
Sbjct: 424 DLQKTLRQIALEEVEKTTFYPEWGRNRLKSMIENRPDWCISRQRDWGVPIAFFRNKKTGE 483
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL---NTSDVNSNVTKSNDILDIWFDSGIS 758
+I +E + + + + G D W+SLSVE+LL + D N ++ K DILD+WFDSG +
Sbjct: 484 VIYDEKVLNYIAMIFERMGTDAWYSLSVEELLYPGSGYDPN-DLEKVMDILDVWFDSGST 542
Query: 759 WSHVLKDK-------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
W VLK + PA +Y+EG DQ GWF SSLL S A++ APF+ + HGF VDEK
Sbjct: 543 WYAVLKSRRYDAGNYPADLYLEGSDQHRGWFQSSLLVSGAIEKRAPFKAILTHGFTVDEK 602
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA 871
G KMSKS GNV++ D+ AKK YGV++LR WVA
Sbjct: 603 GEKMSKSKGNVVAPMDV---AKK--------------------------YGVEILRLWVA 633
Query: 872 AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLC 931
+ + I NIL + +K+R++ R++L + N E+ S +D ++L +
Sbjct: 634 M-SDYQSDLKISDNILKQIAEQYRKLRNTFRFMLANI-NDLETIQSDFGVLDRWILAKAK 691
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
++ + +Q+A+ L NF+VNE S Y + KDRLYCD++N R + +
Sbjct: 692 SVFEEVEKQFKNYQFAKGFSALNNFIVNEFSGIYLDVCKDRLYCDALNDSHRRASQSAMA 751
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
I +L +AP++ + A+E+ H PS
Sbjct: 752 LIAKSMLGLIAPVLTYTADEIVEHAPS 778
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 247/438 (56%), Gaps = 25/438 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +++ GK F LHDGPPYANG HIGHA+NKILKDI ++ N +GK V + PGW
Sbjct: 35 DVYEKMKKSREGKELFTLHDGPPYANGHIHIGHALNKILKDIIVKFNYFEGKAVRFTPGW 94
Query: 66 DCHGLPIEL----KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
DCHGLPIE K T+K + L IR+ + A + + QK EF++ GV+ADWE
Sbjct: 95 DCHGLPIEQQVEKKLGTAKKEQLPKTKIRELCREHAAKFVGIQKEEFKNLGVIADWE-KP 153
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D + + + K+ + KPVYWS +++TALAE+E+EY+ D VS SIY+
Sbjct: 154 YLTMDYAFEADIYRALCEIAKEGLLVERSKPVYWSWAAKTALAEAEVEYE-DKVSPSIYV 212
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
KL++ + + +IWTTTPW+LPAN IA NP +EY + S +VA L
Sbjct: 213 AFKLDKEAVQKI--GKEASIIIWTTTPWTLPANTGIALNPDIEYVLTS---DGYVVAADL 267
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
++ LK +V + L+++ I+P+N R +++ V++ GTG VH AP
Sbjct: 268 LDELKEKGIVKGDVEKSISPKDLENLHAINPLN--GRRSRIVLGEHVTTESGTGAVHTAP 325
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDA------GPGLEGLNILGDGKDQVLHLVEP 355
HG+DD+ + L + VL + + G+Y G+N+ + D++ L+
Sbjct: 326 GHGEDDYRVGLKYDLEVLMPVDDAGRYDETIVREKLLPEEFVGMNVF-EANDKICELLGD 384
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI-LGRVGITHD 414
+L E+ +HSYP+ WRT KP+I +A++QWFI ++ P+ L KT+ I L V T
Sbjct: 385 ALLKKEDIKHSYPHCWRTHKPIIFRATKQWFIAVDK-APKDLQ-KTLRQIALEEVEKTTF 442
Query: 415 RP--GTALAESELEYKPD 430
P G +S +E +PD
Sbjct: 443 YPEWGRNRLKSMIENRPD 460
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 11/149 (7%)
Query: 1125 GLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER------ 1178
G+N+ E D++ L+ +L E+ +HSYP+ WRT KP+I +A++QWFI ++
Sbjct: 368 GMNVF-EANDKICELLGDALLKKEDIKHSYPHCWRTHKPIIFRATKQWFIAVDKAPKDLQ 426
Query: 1179 --IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 1234
++ AL +E F PE + L+ I RP WCISRQR WGVPI F + T +I
Sbjct: 427 KTLRQIALEEVEKTTFYPEWGRNRLKSMIENRPDWCISRQRDWGVPIAFFRNKKTGEVIY 486
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E + + + + G D W+SL VE+LL
Sbjct: 487 DEKVLNYIAMIFERMGTDAWYSLSVEELL 515
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 982 ARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQ--GTFSSFCHFKVYLQYSG-- 1037
A ++ L T+ + F VL R + + EEV + Q FS+ +F V ++SG
Sbjct: 667 ANINDLETIQSDFGVLDRWILAKAKSVFEEVEKQFKNYQFAKGFSALNNFIVN-EFSGIY 725
Query: 1038 -SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1089
+ K LYCD++N R + + I +L +AP++ + A+E+ H PS
Sbjct: 726 LDVCKDRLYCDALNDSHRRASQSAMALIAKSMLGLIAPVLTYTADEIVEHAPS 778
>gi|239826541|ref|YP_002949165.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
gi|259511504|sp|C5D8P2.1|SYI_GEOSW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|239806834|gb|ACS23899.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
Length = 923
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 232/621 (37%), Positives = 332/621 (53%), Gaps = 56/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +L+G D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKDGKG-VLDG--DEKIVIWTTTPWTIPANLAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y V GA +VA L+E++ D + VV G+ L+ + HP RD
Sbjct: 247 PDLDYQVVETNGAKYVVAAALLESVAKEIGWDEVTVVKTIKGKDLEYVVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G Y PG EGL
Sbjct: 305 SLVICGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLDVLCPVDERG-YMTSEAPGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP I +A+ QWF ++I+ E L
Sbjct: 364 FYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKKPTIFRATTQWFASIDKIRGELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E ++PE + + + I R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 424 AIKETKWIPEWGEIRIHNMIRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TIEHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + S N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKEIDIMDVWFDSGSSHQAVLVERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKAVLSHGFVLDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WVA+ V I
Sbjct: 603 -----------VPA------------------KVMEQLGADILRLWVAS-VDYQADVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R++LG L + + T ++ R VD YM+ +L +
Sbjct: 633 DSILKQVAEVYRKIRNTFRFMLGNLFDFNPETDAVPVNELREVDRYMIVKLNHLIENVKH 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LSAFY KD LY ++ N AR S L+ L +
Sbjct: 693 AYETYDFASIYHDVNNFCTVDLSAFYLDFAKDILYIEAPNDRARRSIQTVLYETVVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQ 1020
VAPI+PH AEEV+ H+P+R+
Sbjct: 753 LVAPILPHTAEEVWEHIPNRK 773
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 229/397 (57%), Gaps = 14/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKILKDI +R + G YVPGW
Sbjct: 35 DIYRKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE A+T K K +S + RK + +A E IN Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIE-TALTKKGVDRKSMSVAEFRKLCEQYAYEQINNQREQFKRLGVRGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 153 ITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ +L+G D +IWTTTPW++PAN IA +P L+Y V GA +VA L+
Sbjct: 212 FPVKDGKG-VLDG--DEKIVIWTTTPWTIPANLAIAVHPDLDYQVVETNGAKYVVAAALL 268
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES+ D + VV G+ L+ + HP RD ++ V++ GTG VH AP
Sbjct: 269 ESVAKEIGWDEVTVVKTIKGKDLEYVVAKHPFY--DRDSLVICGEHVTTDAGTGCVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++ + VL + +G Y PG EGL K L E L
Sbjct: 327 GHGEDDFIVGQKYGLDVLCPVDERG-YMTSEAPGFEGLFYDEANKAITQKLEEVGALLKL 385
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKP I +A+ QWF ++I+ E L
Sbjct: 386 SFITHSYPHDWRTKKPTIFRATTQWFASIDKIRGELL 422
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Query: 1111 NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKAS 1169
++ Y PG EGL K L E L ++ HSYP+DWRTKKP I +A+
Sbjct: 348 DERGYMTSEAPGFEGLFYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKKPTIFRAT 407
Query: 1170 QQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-- 1227
QWF ++I+ E L ++ ++PE + + + I R WCISRQR WGVPIPVFY
Sbjct: 408 TQWFASIDKIRGELLQAIKETKWIPEWGEIRIHNMIRDRGDWCISRQRAWGVPIPVFYGE 467
Query: 1228 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 468 NGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 502
>gi|419840444|ref|ZP_14363834.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386907833|gb|EIJ72534.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 931
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 216/625 (34%), Positives = 335/625 (53%), Gaps = 60/625 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFI 474
TALAE+E+EY DH S SIY+K+K N A LLE + + + +IWTTTPW+LPAN I
Sbjct: 193 TALAEAEIEYH-DHTSPSIYVKMKAN---ADLLEKISFPEEAYVVIWTTTPWTLPANVAI 248
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKE 533
+ NP EY V + N+I+ K L E + +++ +F G L+ +Y HP
Sbjct: 249 SLNPEFEYGVYKTEKGNLILGKELAETAFAEMGIEAPELLKEFKGSVLEMTSYQHPFL-- 306
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HGQ+D+++ +P+++ I +G + +AGP
Sbjct: 307 DRTGYIILGTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLF 366
Query: 594 EGLNILGDGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIK 650
GL K + HL E +L + HSYP+DWR+K PVI +A++QWF+ E ++
Sbjct: 367 AGLFYEKANKTIIEHLTEIGLLLKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLR 426
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
+AL L+EV F+P + + + RP WCISRQR+WGVPIPVFY +T I N+
Sbjct: 427 EKALKALDEVEFIPAWGRNRIGSMLETRPDWCISRQRIWGVPIPVFYKEETGEEIFNQDI 486
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHV 762
+ H +++ G D W + E+L+ ++ ++ K +I+D+WFDSG S V
Sbjct: 487 LNHVIAFVEKEGSDAWLLHTPEELIGEENLKKYHLEGVSLRKETNIMDVWFDSGSSHRAV 546
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
L+ PA +Y+EG DQ GWF +SLLTSV + TAPF+ + HGFV D KG KMSK
Sbjct: 547 LETWEGLHWPADLYLEGSDQHRGWFQTSLLTSVGSRGTAPFKKILTHGFVNDGKGEKMSK 606
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S GNV++ I + YG D+LR W A+ ++
Sbjct: 607 SKGNVVAPEKI-----------------------------IKQYGADILRLWCASVDYRE 637
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
V I NI+ + +++R++ RY+LG + ++ +D + L +L
Sbjct: 638 -DVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPKKDAVPYQDLLEIDKWALHKLEML 696
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ ++ Y ++++ + + F ++SAFY ++KDRLY + + AR S + I
Sbjct: 697 KKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIKDRLYTEKEDSLARRSAQTVMIEI 756
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPS 1018
L++ +API+ AEE++ HLP
Sbjct: 757 LMTLVKMIAPILSFTAEEIWEHLPE 781
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/383 (43%), Positives = 232/383 (60%), Gaps = 15/383 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
GK FILHDGPPYANG HIGHA+NKILKDI ++ LQG + Y+PGWD HGLPIELK
Sbjct: 46 KGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELK 105
Query: 76 AIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKN 132
+ SK K ++ L+IRK K +AL ++ Q+ EF GV+ WE + Y T ++
Sbjct: 106 VMEKLGSKAKDMTALEIRKLCKEYALRWVDIQREEFIRMGVIGKWE-DPYLTLKPQFEAK 164
Query: 133 QLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL 192
QL F LY YI++ LKP+YWSP + TALAE+E+EY DH S SIY+K+K N A L
Sbjct: 165 QLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEIEYH-DHTSPSIYVKMKAN---ADL 220
Query: 193 LEGAT---DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTF 249
LE + + + +IWTTTPW+LPAN I+ NP EY V + N+I+ K L E+
Sbjct: 221 LEKISFPEEAYVVIWTTTPWTLPANVAISLNPEFEYGVYKTEKGNLILGKELAETAFAEM 280
Query: 250 QTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF 308
+ E++ +F G L+ +Y HP R ++ V++ GTG VH AP HGQ+D+
Sbjct: 281 GIEAPELLKEFKGSVLEMTSYQHPFL--DRTGYIILGTHVTADAGTGCVHTAPGHGQEDY 338
Query: 309 LLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-TENYQHSY 367
++ +P+++ I +G + +AGP GL K + HL E +L + HSY
Sbjct: 339 VVGCRYNMPIVSPINYKGYLTEEAGPLFAGLFYEKANKTIIEHLTEIGLLLKMKEITHSY 398
Query: 368 PYDWRTKKPVILKASQQWFIDTE 390
P+DWR+K PVI +A++QWF+ E
Sbjct: 399 PHDWRSKTPVIFRATEQWFVKAE 421
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 5/166 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILK 1167
I +G + +AGP GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 352 INYKGYLTEEAGPLFAGLFYEKANKTIIEHLTEIGLLLKMKEITHSYPHDWRSKTPVIFR 411
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF+ E ++ +AL L+ V F+P + + + RP WCISRQR+WGVPIPV
Sbjct: 412 ATEQWFVKAEGSDLREKALKALDEVEFIPAWGRNRIGSMLETRPDWCISRQRIWGVPIPV 471
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVN 1269
FY +T I N+ + H +++ G D W E+L+ ++
Sbjct: 472 FYKEETGEEIFNQDILNHVIAFVEKEGSDAWLLHTPEELIGEENLK 517
>gi|431902425|gb|ELK08925.1| Isoleucyl-tRNA synthetase, mitochondrial [Pteropus alecto]
Length = 634
Score = 369 bits (947), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 192/412 (46%), Positives = 266/412 (64%), Gaps = 19/412 (4%)
Query: 1 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++G ++H
Sbjct: 87 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYYMMRGSKIH 145
Query: 61 YVPGWDCHGLPIELKAIT---SKDKLLSPLDIRKK------AKNFALETINTQKAEFESW 111
+VPGWDCHGLPIE+KA++ K + LS ++IR+K A A I Q++ F W
Sbjct: 146 FVPGWDCHGLPIEIKALSELGGKTQNLSAVEIREKEFTKFVAHGHAKAAIEKQRSAFIRW 205
Query: 112 GVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYK 171
G++ADW +N Y+TFD Y QL FY ++ + IYR KPV+WSPSSRTALAE+ELEY
Sbjct: 206 GIMADW-NNSYYTFDGRYEAKQLRIFYQMFDKGLIYRSYKPVFWSPSSRTALAEAELEYN 264
Query: 172 PDHVSKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA 228
P HVS+SIY+K L + A L+EG++ + LIWTT PW++PANQ + + P +Y++
Sbjct: 265 PKHVSRSIYVKFPLLKPSPKLASLIEGSSPVSFLIWTTQPWTIPANQAVCYMPDAKYALV 324
Query: 229 SVKGAN--VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG 286
+ I+A V + T +T EV+ F G L++ T HP+ ++ LLPA
Sbjct: 325 KCSTSEDLYILAADKVTPVASTLKTAFEVISTFSGADLENGTCTHPLTPDKAS-PLLPAN 383
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGK 346
V+ +KGTGLVH APAHG +D+ +A + L+ G + AGP LE +L +G
Sbjct: 384 HVTMAKGTGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFKAAAGPELENKAVLEEGT 443
Query: 347 DQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++ +K A
Sbjct: 444 DAVIKMLQAAKNLLKEEELLHSYPYDWRTKKPVVIRASKQWFVNIADLKATA 495
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/365 (42%), Positives = 224/365 (61%), Gaps = 19/365 (5%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP---AHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY P H+S+SIY+K L + A L+EG++ + LIWTT PW++PANQ +
Sbjct: 254 TALAEAELEYNPKHVSRSIYVKFPLLKPSPKLASLIEGSSPVSFLIWTTQPWTIPANQAV 313
Query: 475 AFNPALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ P +Y++ + I+A V + T +T +V+ F G L++ T HP+
Sbjct: 314 CYMPDAKYALVKCSTSEDLYILAADKVTPVASTLKTAFEVISTFSGADLENGTCTHPLTP 373
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
++ LLPA V+ +KGTGLVH APAHG +D+ +A + L+ G + AGP
Sbjct: 374 DKAS-PLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFKAAAGPE 432
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
LE +L +G D V+ +++ ++L E HSYPYDWRTKKPV+++AS+QWF++ +K
Sbjct: 433 LENKAVLEEGTDAVIKMLQAAKNLLKEEELLHSYPYDWRTKKPVVIRASKQWFVNIADLK 492
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
A L++V F+P SA+ + + + +RPYWCISRQR WGVPIPVF+ D ++N
Sbjct: 493 ATAKELLKKVKFIPGSAQNAMVEMMDRRPYWCISRQRAWGVPIPVFHHKTKDEFLINSQT 552
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV--------TKSNDILDIWFDSGISWS 760
++H L+++HG D WW+L EQLL +V S V DILDIWFDSG SWS
Sbjct: 553 VEHIIKLVEQHGSDVWWTLPPEQLL-PEEVLSQVGGPDALEYVPGQDILDIWFDSGTSWS 611
Query: 761 HVLKD 765
+VL D
Sbjct: 612 YVLPD 616
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 106/160 (66%), Gaps = 4/160 (2%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVI 1165
L+ G + AGP LE +L EG D V+ +++ ++L E HSYPYDWRTKKPV+
Sbjct: 418 LVDEDGVFKAAAGPELENKAVLEEGTDAVIKMLQAAKNLLKEEELLHSYPYDWRTKKPVV 477
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
++AS+QWF++ +K A L+ V F+P SA+ ++ + + +RPYWCISRQR WGVPIPV
Sbjct: 478 IRASKQWFVNIADLKATAKELLKKVKFIPGSAQNAMVEMMDRRPYWCISRQRAWGVPIPV 537
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ D ++N ++H L+++HG D WW+LP EQLL
Sbjct: 538 FHHKTKDEFLINSQTVEHIIKLVEQHGSDVWWTLPPEQLL 577
>gi|336420097|ref|ZP_08600339.1| isoleucine--tRNA ligase [Fusobacterium sp. 11_3_2]
gi|336162059|gb|EGN65048.1| isoleucine--tRNA ligase [Fusobacterium sp. 11_3_2]
Length = 933
Score = 369 bits (946), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 341/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ANFDYGLYKTEKGNLILAKDLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPFL--ERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++ LA K+PV++ I ++G + +AG +GL
Sbjct: 313 GLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + +L + +L + HSYP+DWR+K PVI +A++QWFI E ++
Sbjct: 373 VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W S E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NIL + ++IR++ RY+LG ++ + T + +D + L +L + +
Sbjct: 643 RISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ AEE++ LP+
Sbjct: 763 LTKMIAPILSFTAEEIWESLPA 784
Score = 303 bits (775), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 234/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SK + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVSKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DH S SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNANFDYGLYKTEKGNLILAKDLAESAFKDIGIENFEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQ+D+++ LA K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + +L + +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + +L + +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLRERTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKSPEELI 514
>gi|294783857|ref|ZP_06749179.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
gi|294479669|gb|EFG27448.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
Length = 933
Score = 369 bits (946), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 213/622 (34%), Positives = 340/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAFVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLAESAFKDIGIENAELLKEFKGKDLEYATYQHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ L K+PV++ I ++G + +AG +GL
Sbjct: 313 GLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++E+NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W + E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKTPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLHRPCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGKKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N ++ D+ + YG D+LR W + +D V
Sbjct: 613 NTVAPSDV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L +
Sbjct: 643 RISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRN 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ I
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEILMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ +LP+
Sbjct: 763 LTKMVAPILSFTAEEIWENLPA 784
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 236/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT-- 78
FILHDGPPYANG HIGHA+NKILKDI ++ +G R YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGFRSPYVPGWDTHGLPIELQVVKEV 112
Query: 79 --SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+K + +SPL+IRK+ + +A + + QK +F GVL +W+ N Y T D ++ QL
Sbjct: 113 GLAKAREMSPLEIRKRCEEYARKWVGIQKEQFIRLGVLGNWD-NPYLTLDPKFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y++ YI++ LKPVYWSP++ TALAE+E+EY DH S SIY++++ N+ +
Sbjct: 172 FGEIYEKGYIFKGLKPVYWSPATETALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAFVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKDIGIENAEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++ L K
Sbjct: 291 LKEFKGKDLEYATYQHPF--LERTGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + HL E +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKTPEELI 514
>gi|340755474|ref|ZP_08692158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
gi|421499743|ref|ZP_15946777.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313687301|gb|EFS24136.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
gi|402269374|gb|EJU18708.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 931
Score = 369 bits (946), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 216/625 (34%), Positives = 335/625 (53%), Gaps = 60/625 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFI 474
TALAE+E+EY DH S SIY+K+K N A LLE + + + +IWTTTPW+LPAN I
Sbjct: 193 TALAEAEIEYH-DHTSPSIYVKMKAN---ADLLEKISFPEEAYVVIWTTTPWTLPANVAI 248
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKE 533
+ NP EY V + N+I+ K L E + +++ +F G L+ +Y HP
Sbjct: 249 SLNPEFEYGVYKTEKGNLILGKELAETAFAEMGIEAPELLKEFKGSVLEMTSYQHPFL-- 306
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HGQ+D+++ +P+++ I +G + +AGP
Sbjct: 307 DRTGYIILGTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLF 366
Query: 594 EGLNILGDGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIK 650
GL K + HL E +L + HSYP+DWR+K PVI +A++QWF+ E ++
Sbjct: 367 AGLFYEKANKAIIEHLTEIGLLLKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLR 426
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
+AL L+EV F+P + + + RP WCISRQR+WGVPIPVFY +T I N+
Sbjct: 427 EKALKALDEVEFIPAWGRNRIGSMLETRPDWCISRQRIWGVPIPVFYKEETGEEIFNQDI 486
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHV 762
+ H +++ G D W + E+L+ ++ ++ K +I+D+WFDSG S V
Sbjct: 487 LNHVIAFVEKEGSDAWLLHTPEELIGEENLKKYHLEGVSLRKETNIMDVWFDSGSSHRAV 546
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
L+ PA +Y+EG DQ GWF +SLLTSV + TAPF+ + HGFV D KG KMSK
Sbjct: 547 LETWEGLHWPADLYLEGSDQHRGWFQTSLLTSVGSRGTAPFKKILTHGFVNDGKGEKMSK 606
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S GNV++ I + YG D+LR W A+ ++
Sbjct: 607 SKGNVVAPEKI-----------------------------IKQYGADILRLWCASVDYRE 637
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
V I NI+ + +++R++ RY+LG + ++ +D + L +L
Sbjct: 638 -DVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPKKDAVPYQDLLEIDKWALHKLEML 696
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ ++ Y ++++ + + F ++SAFY ++KDRLY + + AR S + I
Sbjct: 697 KKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIKDRLYTEKEDSLARRSAQTVMIEI 756
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPS 1018
L++ +API+ AEE++ HLP
Sbjct: 757 LMTLVKMIAPILSFTAEEIWEHLPE 781
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/383 (43%), Positives = 232/383 (60%), Gaps = 15/383 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
GK FILHDGPPYANG HIGHA+NKILKDI ++ LQG + Y+PGWD HGLPIELK
Sbjct: 46 KGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELK 105
Query: 76 AIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKN 132
+ SK K ++ L+IRK K +AL ++ Q+ EF GV+ WE + Y T ++
Sbjct: 106 VMEKLGSKAKDMTALEIRKLCKEYALRWVDIQREEFIRMGVIGKWE-DPYLTLKPQFEAK 164
Query: 133 QLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL 192
QL F LY YI++ LKP+YWSP + TALAE+E+EY DH S SIY+K+K N A L
Sbjct: 165 QLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEIEYH-DHTSPSIYVKMKAN---ADL 220
Query: 193 LEGAT---DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTF 249
LE + + + +IWTTTPW+LPAN I+ NP EY V + N+I+ K L E+
Sbjct: 221 LEKISFPEEAYVVIWTTTPWTLPANVAISLNPEFEYGVYKTEKGNLILGKELAETAFAEM 280
Query: 250 QTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF 308
+ E++ +F G L+ +Y HP R ++ V++ GTG VH AP HGQ+D+
Sbjct: 281 GIEAPELLKEFKGSVLEMTSYQHPFL--DRTGYIILGTHVTADAGTGCVHTAPGHGQEDY 338
Query: 309 LLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-TENYQHSY 367
++ +P+++ I +G + +AGP GL K + HL E +L + HSY
Sbjct: 339 VVGCRYNMPIVSPINYKGYLTEEAGPLFAGLFYEKANKAIIEHLTEIGLLLKMKEITHSY 398
Query: 368 PYDWRTKKPVILKASQQWFIDTE 390
P+DWR+K PVI +A++QWF+ E
Sbjct: 399 PHDWRSKTPVIFRATEQWFVKAE 421
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 5/166 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILK 1167
I +G + +AGP GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 352 INYKGYLTEEAGPLFAGLFYEKANKAIIEHLTEIGLLLKMKEITHSYPHDWRSKTPVIFR 411
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF+ E ++ +AL L+ V F+P + + + RP WCISRQR+WGVPIPV
Sbjct: 412 ATEQWFVKAEGSDLREKALKALDEVEFIPAWGRNRIGSMLETRPDWCISRQRIWGVPIPV 471
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVN 1269
FY +T I N+ + H +++ G D W E+L+ ++
Sbjct: 472 FYKEETGEEIFNQDILNHVIAFVEKEGSDAWLLHTPEELIGEENLK 517
>gi|421145637|ref|ZP_15605492.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395487961|gb|EJG08861.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 933
Score = 369 bits (946), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 213/624 (34%), Positives = 344/624 (55%), Gaps = 58/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH+S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHVSPSIYVRMQTNKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ L K+PV++ I ++G + +AG +GL
Sbjct: 313 GLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + +L + +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIIEYLTKTGHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLL--------NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
C L+ E+G + W S E+L+ N D+ + K +I+D+WFDSG S VL
Sbjct: 493 ICDLVRENGSNIWVEKSPEELIGEELLVKYNLKDLK--LRKETNIMDVWFDSGSSHRGVL 550
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS
Sbjct: 551 EVWKGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKS 610
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN +S D+ + YG D+LR W + +D
Sbjct: 611 LGNTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD- 640
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQ 934
V I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L +
Sbjct: 641 DVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLK 700
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 701 RNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVL 760
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ LP+
Sbjct: 761 MTLTKMVAPILSFTAEEIWESLPA 784
Score = 303 bits (776), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 234/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGYKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+K + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVAKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DHVS SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHVSPSIYVRMQTNKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKDIGIENFEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++ L K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + +L + +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEINHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + +L + +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEINHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ E+G + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICDLVRENGSNIWVEKSPEELI 514
>gi|289765591|ref|ZP_06524969.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
gi|289717146|gb|EFD81158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
Length = 933
Score = 369 bits (946), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 341/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ANFDYGLYKTEKGNLILAKDLAESAFKDIGIGNFELIKEFKGKDLEYTTYKHPFL--ERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++ LA K+PV++ I ++G + +AG +GL
Sbjct: 313 GLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + +L + +L + HSYP+DWR+K PVI +A++QWFI E ++
Sbjct: 373 VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W S E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NIL + ++IR++ RY+LG ++ + T + +D + L +L + +
Sbjct: 643 RISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ AEE++ LP+
Sbjct: 763 LTKMIAPILSFTAEEIWESLPA 784
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 234/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SK + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVSKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DH S SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNANFDYGLYKTEKGNLILAKDLAESAFKDIGIGNFEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQ+D+++ LA K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + +L + +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + +L + +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLRERTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKSPEELI 514
>gi|453088551|gb|EMF16591.1| isoleucyl-tRNA synthetase [Mycosphaerella populorum SO2202]
Length = 1090
Score = 369 bits (946), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 346/649 (53%), Gaps = 55/649 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQF 473
TALAE+ELEY +H + + ++ + + ++P+ LL + L ALIWTTTPW+LPAN+
Sbjct: 255 TALAEAELEYDDNHKTTAAFILMPIVRLPSILLRDKDIQPSKLSALIWTTTPWTLPANKA 314
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC--DFPGQYLQDITYIHPIN 531
IA N +EY + + K +VAK +E+L+ D VV F G L D
Sbjct: 315 IAVNGDIEYCLVNTKSDQFLVAKDRLEHLQSFLPDDQFVVTPKSFSGSELADGQATCFNI 374
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI-PVLNLITNQGKYSPDAG 590
++ +L A FV+++ GTGLVH AP HG DD++L I P + + G ++ D
Sbjct: 375 FTGQESPILQADFVTATSGTGLVHIAPGHGMDDYVLCQQNGIGPAFAPVNDGGMFTSDVW 434
Query: 591 PG--------LEGLNILGDGKDQVLHLV---------EPDVLWTE------NYQHSYPYD 627
P L G G + VL+++ + DVL ++ ++ H P D
Sbjct: 435 PTAKDSDLDLLHGQFAPTKGTNAVLNIMRGCSKYLPADRDVLSSDLVLAAHSFAHKNPID 494
Query: 628 WRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQR 687
WRTK+PVI +A+ QWF D IK ALA L++VNF+PES K LR + R WCISRQR
Sbjct: 495 WRTKQPVITRATAQWFADASAIKDRALAALDDVNFIPESGKSRLRSFVEGRSQWCISRQR 554
Query: 688 VWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQ--LLNTSDVNSNVT 743
VWGVPIP Y DT + + +I H + +++ G D W+S + + L++S
Sbjct: 555 VWGVPIPALYHADTGEACITDESIAHIISTLEQRGSDAWFSDAKDDPAWLHSSLEPGKWH 614
Query: 744 KSNDILDIWFDSGISWSHVLKDKP----AHVYMEGMDQINGWFMSSLLTSVAL-----KH 794
+ D +D+WFDSG SW+ + + + VY EG DQ GWF SSLLT+VA+ K
Sbjct: 615 RGRDTMDVWFDSGSSWTSLSAREAGMPLSDVYSEGTDQHRGWFQSSLLTAVAMQDPHAKP 674
Query: 795 TAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQG 854
APF+ + HGF +D G KMSKS+GNV+S I GA L ++ N
Sbjct: 675 VAPFKMLATHGFTLDGDGKKMSKSLGNVVSPEGIISGA--LVQTQRGTKNGKRQQQEPPP 732
Query: 855 AKKLPAYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSE 913
+ + G DVLR WVA+ ++D V I + ++ S Q +QK R + ++LLGVLH++S
Sbjct: 733 NSQKTSLGPDVLRLWVASSDFTRD--VSISQTVIQSVQQALQKYRVTFKFLLGVLHDYSL 790
Query: 914 STGSISRYV-----DVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTL 968
T + + D ML RL E ++ Y E+++ F+ N+LSAFY L
Sbjct: 791 LTPNKGPKLQLDLPDRVMLYRLQETNKSVKRAYSEYRFYVGINESNKFINNDLSAFYLEL 850
Query: 969 VKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
KDRLY S E+R L +I ++R + P+ PHL EEV + LP
Sbjct: 851 AKDRLYAGST--ESRQRTQMILLHILQNMIRWLGPVTPHLIEEVEAFLP 897
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/477 (38%), Positives = 257/477 (53%), Gaps = 68/477 (14%)
Query: 6 ELYSWQRE-------------ALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSN 52
+LY+WQRE + EF+LHDGPPYANG H+GHA+NKILKD+ LR+
Sbjct: 64 DLYAWQREHRPKTATIKDASGSRQVDNEFVLHDGPPYANGAVHVGHALNKILKDLMLRTE 123
Query: 53 LLQGKRVHYVPGWDCHGLPIELKAI----TSKDKL--------------------LSPLD 88
L +G+RVHY PGWDCHGLPIELKA+ +SKD++ ++ D
Sbjct: 124 LARGRRVHYRPGWDCHGLPIELKALQQPRSSKDRVKPSRDAPKKEAQAAAEAANQMTASD 183
Query: 89 IRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYR 148
IR+ A A ETI +QK F+SWGV+ DW+ Y T K++ QL F + ++ I R
Sbjct: 184 IRQAASKLATETIESQKKSFKSWGVMGDWDAP-YTTMSKDFEIRQLEVFREMVRKGLISR 242
Query: 149 DLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA----TDLHALIW 204
+PV+WSPSSRTALAE+ELEY +H + + ++ + + ++P+ LL + L ALIW
Sbjct: 243 HHRPVHWSPSSRTALAEAELEYDDNHKTTAAFILMPIVRLPSILLRDKDIQPSKLSALIW 302
Query: 205 TTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEVVC--DFPGQ 262
TTTPW+LPAN+ IA N +EY + + K +VAK +E L+ D VV F G
Sbjct: 303 TTTPWTLPANKAIAVNGDIEYCLVNTKSDQFLVAKDRLEHLQSFLPDDQFVVTPKSFSGS 362
Query: 263 YLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI-PVLNL 321
L D ++ +L A FV+++ GTGLVH AP HG DD++L I P
Sbjct: 363 ELADGQATCFNIFTGQESPILQADFVTATSGTGLVHIAPGHGMDDYVLCQQNGIGPAFAP 422
Query: 322 ITNQGKYSPDAGPG--------LEGLNILGDGKDQVLHLV---------EPDVLWTE--- 361
+ + G ++ D P L G G + VL+++ + DVL ++
Sbjct: 423 VNDGGMFTSDVWPTAKDSDLDLLHGQFAPTKGTNAVLNIMRGCSKYLPADRDVLSSDLVL 482
Query: 362 ---NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDR 415
++ H P DWRTK+PVI +A+ QWF D IK AL N + G + R
Sbjct: 483 AAHSFAHKNPIDWRTKQPVITRATAQWFADASAIKDRALAALDDVNFIPESGKSRLR 539
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 1144 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRD 1203
VL ++ H P DWRTK+PVI +A+ QWF D IK ALA L+ VNF+PES K LR
Sbjct: 481 VLAAHSFAHKNPIDWRTKQPVITRATAQWFADASAIKDRALAALDDVNFIPESGKSRLRS 540
Query: 1204 QIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
+ R WCISRQRVWGVPIP Y DT + + +I H + +++ G D W+S
Sbjct: 541 FVEGRSQWCISRQRVWGVPIPALYHADTGEACITDESIAHIISTLEQRGSDAWFS 595
>gi|224372735|ref|YP_002607107.1| isoleucyl-tRNA synthetase [Nautilia profundicola AmH]
gi|254782422|sp|B9L8Z9.1|SYI_NAUPA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|223589145|gb|ACM92881.1| isoleucyl-tRNA synthetase [Nautilia profundicola AmH]
Length = 911
Score = 369 bits (946), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 223/633 (35%), Positives = 353/633 (55%), Gaps = 72/633 (11%)
Query: 413 HDRPGTALAESELEYKPDHISKSIYLKIKL-NQVPAHLLEGATDLHALIWTTTPWSLPAN 471
HD+ TALAE+E+EY+ D SIY+ L N+ + L G + +IWTTTPW+LPAN
Sbjct: 190 HDK--TALAEAEVEYE-DKEDYSIYVAFPLSNEAKSKL--GIDNASIVIWTTTPWTLPAN 244
Query: 472 QFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
IA NP +Y V S G IVAK L ENLK ++V +F L+++ I+P+N
Sbjct: 245 MGIALNPEEKY-VLSEDGK--IVAKELYENLKEAEVVSGEIVKEFDASELENLKAINPLN 301
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIP-VLNLITNQGKYS---- 586
R+ ++ V+ GTG VH AP HG++D+ + L +L + ++GKYS
Sbjct: 302 --GRESVIILGEHVTMDGGTGCVHTAPGHGEEDYRVWLKYGFSEILQPVDDEGKYSNLIV 359
Query: 587 -----PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQ 641
P+ +G++I + ++L L+ +++ + HSYP+ WR PVI +A++Q
Sbjct: 360 TEKLLPEE---FKGMHIF-EANPKILDLLGDNLVKVSKFTHSYPHCWRCHNPVIFRATKQ 415
Query: 642 WFIDTER------IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPV 695
+FI ++ ++ AL+ +E+V F P++ K L +A RP WCISRQR WGVPI
Sbjct: 416 FFIAMDKEVNGDTLRHRALSEIEKVEFTPKTGKNRLSTMVANRPDWCISRQRDWGVPIAF 475
Query: 696 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDI 751
F + DT +I+++ I++ + G D W+ LS+E+LL S ++ S + K NDILD+
Sbjct: 476 FRNKDTGELIIDDEIIENVYEIFKVKGADAWYDLSIEELLPESKKEMASKLEKVNDILDV 535
Query: 752 WFDSGISWSHVLKDKP-------AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLH 804
WFDSG +W VLK+ P A++Y+EG DQ GWF SSLL S +++ AP++++ H
Sbjct: 536 WFDSGSTWFAVLKNGPYDAGEYPANMYLEGSDQHRGWFQSSLLVSTSIEERAPYKSILTH 595
Query: 805 GFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVD 864
GF VDEKG KMSKS GNV++ ++++ +G +
Sbjct: 596 GFTVDEKGEKMSKSKGNVVAPQEVSK-----------------------------KFGTE 626
Query: 865 VLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV 924
+LR WVA + + I IL + +KIR+++R+LL +++ E + +D
Sbjct: 627 ILRLWVAT-SDYSGDIKISDGILKQVAEQYRKIRNTIRFLLANVNDLEEIKLTNPSMIDR 685
Query: 925 YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARL 984
++L R E + + L+G++ +++A +L NF+V ELSA Y + KDRLYC+ +N E R
Sbjct: 686 WILARSKEVFDEVVALFGKYDFSKAFNILNNFIVTELSAIYMDVCKDRLYCEPLNSEKRR 745
Query: 985 SGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ T+ I L+ +AP++ + +E H P
Sbjct: 746 NSQSTMAVIVKELISLLAPVLTYTMDEAVEHAP 778
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 225/404 (55%), Gaps = 29/404 (7%)
Query: 4 FSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
FSE +Y ++ G +F LHDGPPYANG HIGHA+NKILKD+ ++ QG V Y
Sbjct: 32 FSEHVYERMKQNRVGNDKFNLHDGPPYANGHIHIGHALNKILKDMIVKYYYFQGFDVRYT 91
Query: 63 PGWDCHGLPIEL----KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIE K K + L +R+ + A + I QK EF++ GV+ DW+
Sbjct: 92 PGWDCHGLPIEQQVEKKIGREKKESLPKSKVRELCRQHAAKFIEIQKEEFQNLGVIGDWD 151
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T D E+ N + K+ + KPV+W +TALAE+E+EY+ D S
Sbjct: 152 -NPYKTMDFEFEANIYKALAEIAKKGLLVERSKPVFWCMHDKTALAEAEVEYE-DKEDYS 209
Query: 179 IYLKIKL-NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 237
IY+ L N+ + L G + +IWTTTPW+LPAN IA NP +Y V S G IV
Sbjct: 210 IYVAFPLSNEAKSKL--GIDNASIVIWTTTPWTLPANMGIALNPEEKY-VLSEDGK--IV 264
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
AK L E+LK E+V +F L+++ I+P+N R+ ++ V+ GTG V
Sbjct: 265 AKELYENLKEAEVVSGEIVKEFDASELENLKAINPLN--GRESVIILGEHVTMDGGTGCV 322
Query: 298 HCAPAHGQDDFLLALAEKIP-VLNLITNQGKYS---------PDAGPGLEGLNILGDGKD 347
H AP HG++D+ + L +L + ++GKYS P+ +G++I +
Sbjct: 323 HTAPGHGEEDYRVWLKYGFSEILQPVDDEGKYSNLIVTEKLLPEE---FKGMHIF-EANP 378
Query: 348 QVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
++L L+ +++ + HSYP+ WR PVI +A++Q+FI ++
Sbjct: 379 KILDLLGDNLVKVSKFTHSYPHCWRCHNPVIFRATKQFFIAMDK 422
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 23/193 (11%)
Query: 1106 LNLITNQGKYS---------PDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPY 1156
L + ++GKYS P+ +G++I E ++L L+ +++ + HSYP+
Sbjct: 345 LQPVDDEGKYSNLIVTEKLLPEE---FKGMHIF-EANPKILDLLGDNLVKVSKFTHSYPH 400
Query: 1157 DWRTKKPVILKASQQWFIDTER------IKPEALACLEGVNFVPESAKKSLRDQIAQRPY 1210
WR PVI +A++Q+FI ++ ++ AL+ +E V F P++ K L +A RP
Sbjct: 401 CWRCHNPVIFRATKQFFIAMDKEVNGDTLRHRALSEIEKVEFTPKTGKNRLSTMVANRPD 460
Query: 1211 WCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS-- 1266
WCISRQR WGVPI F + DT +I+++ I++ + G D W+ L +E+LL S
Sbjct: 461 WCISRQRDWGVPIAFFRNKDTGELIIDDEIIENVYEIFKVKGADAWYDLSIEELLPESKK 520
Query: 1267 DVNSNVTKSNQGL 1279
++ S + K N L
Sbjct: 521 EMASKLEKVNDIL 533
>gi|448237304|ref|YP_007401362.1| isoleucyl-tRNA synthetase [Geobacillus sp. GHH01]
gi|445206146|gb|AGE21611.1| isoleucyl-tRNA synthetase [Geobacillus sp. GHH01]
Length = 924
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 227/627 (36%), Positives = 333/627 (53%), Gaps = 56/627 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +LEG D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKNGKG-VLEG--DERIVIWTTTPWTIPANLAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y V V G +VA L E++ D VV G+ L+ + HP +RD
Sbjct: 247 PDLDYHVVDVSGKRYVVAAALAESVAKEIGWDAWSVVKTVKGKELEYVVARHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ +PVL + +G Y + PG G+
Sbjct: 305 SLVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFAGM 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 364 FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E ++PE + + + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 424 AIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TIEHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + S N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDSGSSHQAVLVERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 543 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V I
Sbjct: 603 -----------VPA------------------KVMEQFGADILRLWVAS-VDYQADVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R++LG L + + ++ VD YML +L + +
Sbjct: 633 DHILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPIGELGEVDRYMLAKLNKLIAKVKK 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + +F ELSAFY + KD LY ++ + AR + L+ L +
Sbjct: 693 AYDRYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADSRARRAVQTVLYETVVALAK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+API+PH A+EV+ H+P+R+ S
Sbjct: 753 LIAPILPHTADEVWEHIPNRRENVESI 779
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 226/396 (57%), Gaps = 12/396 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKILKDI +R + G YVPGW
Sbjct: 35 DIYRKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L K +S + RK+ + +A E I+ Q+ +F+ GV DW+ N Y
Sbjct: 95 DTHGLPIETALAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGDWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ +LEG D +IWTTTPW++PAN IA +P L+Y V V G +VA L E
Sbjct: 213 PVKNGKG-VLEG--DERIVIWTTTPWTIPANLAIAVHPDLDYHVVDVSGKRYVVAAALAE 269
Query: 244 SLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ D VV G+ L+ + HP +RD ++ V++ GTG VH AP
Sbjct: 270 SVAKEIGWDAWSVVKTVKGKELEYVVARHPFY--ERDSLVVCGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ +PVL + +G Y + PG G+ K L E L
Sbjct: 328 HGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFAGMFYEDANKAITQKLEEVGALLKLG 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 387 FITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELL 422
Score = 109 bits (273), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Query: 1110 TNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKA 1168
++ Y + PG G+ K L E L + HSYP+DWRTK+P I +A
Sbjct: 347 VDERGYMTEEAPGFAGMFYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRA 406
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY- 1227
+ QWF ++I+ E L ++ ++PE + + + + R WCISRQR WGVPIPVFY
Sbjct: 407 TTQWFASIDKIRNELLQAIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYG 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 467 ENGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 502
Score = 48.1 bits (113), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1026 FCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1085
FC ++ Y +AK ILY ++ + AR + L+ L + +API+PH A+EV+
Sbjct: 709 FCTVELSAFYL-DMAKDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWE 767
Query: 1086 HLPSRQGTFSSF 1097
H+P+R+ S
Sbjct: 768 HIPNRRENVESI 779
>gi|294501005|ref|YP_003564705.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
gi|294350942|gb|ADE71271.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
Length = 921
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 327/618 (52%), Gaps = 54/618 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + L + D +IWTTTPW++PANQ IA N
Sbjct: 192 SALAEAEIEYY-DKRSASIYVAFNVKDGKGVLEQ---DEKFIIWTTTPWTMPANQGIAVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+YSV GA +VA L+E + + D + G L+ + HPI K RD
Sbjct: 248 PELQYSVVEADGAKYVVATELIETVAKEIEWADYKTLRTVKGSELERVVAEHPIYK--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 306 SLVVLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDSKGHMTNEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLLK 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCT 714
+E+ +VP + L + + R WCISRQR WGVPIPVFY + D I+ + I+H
Sbjct: 425 AVEKTKWVPTWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYAENDEPIITDETIEHVSN 484
Query: 715 LIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
L EHG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 485 LFREHGSNVWFEREAKDLLPEGFTHEGSPNGRFTKETDIMDVWFDSGSSHQAVLEEREDL 544
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSL TSVA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 545 QRPADLYLEGSDQYRGWFNSSLSTSVAVTGEAPYKGVLSHGFALDGEGRKMSKSLGNVV- 603
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+P K + G D+LR WVA+ V +
Sbjct: 604 ----------IPE------------------KVMKQLGADILRLWVAS-VDYQADVRVSD 634
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTL 940
NIL + +KIR++ R+LLG L + + +T +++ R VD YML +L + + +
Sbjct: 635 NILKQVAEVYRKIRNTFRFLLGNLADFNPTTDAVAVEDLREVDRYMLVKLNKLIDKVKKS 694
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y ++++ + NF ++S+FY KD LY ++ N R S L+ L +
Sbjct: 695 YDSYEFSSIYHAVHNFCTIDMSSFYLDFAKDVLYIEAENNVERRSIQTVLYETLLSLTKL 754
Query: 1001 VAPIMPHLAEEVYSHLPS 1018
V+PI+ H A+EV+ H+P+
Sbjct: 755 VSPILSHTADEVWVHIPN 772
Score = 286 bits (733), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 228/396 (57%), Gaps = 13/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y ++ G+P F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGWD
Sbjct: 36 IYEKVQKRTEGRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +K K ++ + RK + +A E +N Q+ +F+ GV DW+ N Y
Sbjct: 96 THGLPIETALTKNKKVNRKEMTVAEFRKLCEQYAWEQVNGQREQFKRLGVRGDWD-NPYV 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T +Y Q+ F ++ K+ YIY+ LKPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 155 TLQPQYEAQQIKVFGDMAKKGYIYKGLKPVYWSPSSESALAEAEIEYY-DKRSASIYVAF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L + D +IWTTTPW++PANQ IA NP L+YSV GA +VA L+E
Sbjct: 214 NVKDGKGVLEQ---DEKFIIWTTTPWTMPANQGIAVNPELQYSVVEADGAKYVVATELIE 270
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ + D + + G L+ + HPI K RD ++ V++ GTG VH AP
Sbjct: 271 TVAKEIEWADYKTLRTVKGSELERVVAEHPIYK--RDSLVVLGDHVTTDAGTGCVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L +
Sbjct: 329 HGEDDFIVGQKYGLEVLCPVDSKGHMTNEA-PGFEGLFYDKANKPITDKLEEEGALLKLS 387
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 388 FITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLL 423
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L ++ HSYP+DWRTKKP I +
Sbjct: 348 VDSKGHMTNEA-PGFEGLFYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L +E +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKDFREDLLKAVEKTKWVPTWGETRLYNMVRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ D I+ + I+H L EHG + W+ + LL
Sbjct: 467 AENDEPIITDETIEHVSNLFREHGSNVWFEREAKDLL 503
>gi|358468101|ref|ZP_09177738.1| isoleucine--tRNA ligase [Fusobacterium sp. oral taxon 370 str. F0437]
gi|357065527|gb|EHI75719.1| isoleucine--tRNA ligase [Fusobacterium sp. oral taxon 370 str. F0437]
Length = 933
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 340/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAFVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKELAESAFKDIGIENAELLKEFKGKELEYTTYQHPFL--ERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++ L K+PV++ I ++G + +AG +GL
Sbjct: 313 GLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLNYKLPVVSPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K V HL E +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIVKHLTETGHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++E+NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W + E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 LCDLVREHGSNIWVEKTPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLHRPCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGKKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPSDV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L +
Sbjct: 643 RISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRN 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ AEE++ +LP+
Sbjct: 763 LTKMIAPILSFTAEEIWENLPA 784
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 237/381 (62%), Gaps = 11/381 (2%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
NG+ FILHDGPPYANG HIGHA+NKILKDI ++ +G R YVPGWD HGLPIEL+
Sbjct: 49 NGES-FILHDGPPYANGNTHIGHALNKILKDIIIKYKTFRGFRSPYVPGWDTHGLPIELQ 107
Query: 76 AIT----SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ +K + +SPL+IRK+ + +A + + QK +F GVL DW+ N Y T D +
Sbjct: 108 VVKEVGIAKAREMSPLEIRKRCEEYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
QL F +Y++ YI++ LKPVYWSP + TALAE+E+EY DH S SIY++++ N+
Sbjct: 167 KQLELFGEIYEKGYIFKGLKPVYWSPVTETALAEAEIEYY-DHTSPSIYVRMQANKDLLD 225
Query: 192 LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQ 250
+ D LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K
Sbjct: 226 KIGFNEDAFVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKELAESAFKDIGI 285
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
+ E++ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQ+D+++
Sbjct: 286 ENAELLKEFKGKELEYTTYQHPF--LERTGLIILGDHVTADAGTGAVHTAPGHGQEDYVV 343
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPY 369
L K+PV++ I ++G + +AG +GL K V HL E +L + HSYP+
Sbjct: 344 GLNYKLPVVSPIDHRGCLTEEAGDLFKGLVYSEANKAIVKHLTETGHILKMQEITHSYPH 403
Query: 370 DWRTKKPVILKASQQWFIDTE 390
DWR+K PVI +A++QWFI E
Sbjct: 404 DWRSKTPVIFRATEQWFIRME 424
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K V HL E +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIVKHLTETGHILKMQEITHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRLCDLVREHGSNIWVEKTPEELI 514
>gi|375008105|ref|YP_004981738.1| isoleucyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359286954|gb|AEV18638.1| Isoleucyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 924
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 227/626 (36%), Positives = 332/626 (53%), Gaps = 56/626 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +LEG D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKDGKG-VLEG--DERIVIWTTTPWTIPANLAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y V G +VA LVE++ D VV G L+ + HP +RD
Sbjct: 247 PELDYHVVETNGQKYVVAAALVESVANEVGWDAWSVVKTVKGNELEYVVARHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ +PVL + +G Y + PG G+
Sbjct: 305 SLVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFAGM 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 364 FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRATTQWFASIDKIRSELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E ++PE + + + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 424 AIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TIEHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + S N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDSGSSHQAVLVERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 543 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V I
Sbjct: 603 -----------VPA------------------KVMEQFGADILRLWVAS-VDYQADVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R++LG L + + ++ VD YML +L + +
Sbjct: 633 DHILKQVSEVYRKIRNTFRFMLGNLFDFDPNENAVPIGELGEVDRYMLAKLNKLIAKVKK 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + +F ELSAFY + KD LY ++ + AR + L+ L +
Sbjct: 693 AYDRYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADSRARRAVQTVLYETVVALAK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSS 1025
+API+PH A+EV+ H+P+R+ S
Sbjct: 753 LIAPILPHTADEVWEHIPNRRENVES 778
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 224/396 (56%), Gaps = 12/396 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKILKDI +R + G YVPGW
Sbjct: 35 DIYRKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMNGYCAPYVPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L K +S + RK + +A E I+ Q+ +F+ GV DW+ N Y
Sbjct: 95 DTHGLPIETALAKQGVDRKSMSVAEFRKLCEQYAYEQIDNQRRQFKRLGVRGDWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ +LEG D +IWTTTPW++PAN IA +P L+Y V G +VA LVE
Sbjct: 213 PVKDGKG-VLEG--DERIVIWTTTPWTIPANLAIAVHPELDYHVVETNGQKYVVAAALVE 269
Query: 244 SLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ D VV G L+ + HP +RD ++ V++ GTG VH AP
Sbjct: 270 SVANEVGWDAWSVVKTVKGNELEYVVARHPFY--ERDSLVVCGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ +PVL + +G Y + PG G+ K L E L
Sbjct: 328 HGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFAGMFYEDANKAITQKLEEVGALLKLG 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 387 FITHSYPHDWRTKQPTIFRATTQWFASIDKIRSELL 422
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Query: 1110 TNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKA 1168
++ Y + PG G+ K L E L + HSYP+DWRTK+P I +A
Sbjct: 347 VDERGYMTEEAPGFAGMFYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRA 406
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY- 1227
+ QWF ++I+ E L ++ ++PE + + + + R WCISRQR WGVPIPVFY
Sbjct: 407 TTQWFASIDKIRSELLQAIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYG 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 467 ENGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 502
Score = 48.5 bits (114), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 1026 FCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1085
FC ++ Y +AK ILY ++ + AR + L+ L + +API+PH A+EV+
Sbjct: 709 FCTVELSAFYL-DMAKDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWE 767
Query: 1086 HLPSRQGTFSS 1096
H+P+R+ S
Sbjct: 768 HIPNRRENVES 778
>gi|56419671|ref|YP_146989.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|81819763|sp|Q5L0V9.1|SYI_GEOKA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|56379513|dbj|BAD75421.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
Length = 924
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 227/626 (36%), Positives = 333/626 (53%), Gaps = 56/626 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +LEG D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKNGKG-VLEG--DERIVIWTTTPWTIPANLAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y V V G +VA L E++ D VV G+ L+ + HP +RD
Sbjct: 247 PDLDYHVVDVSGKRYVVAAALAESVAKEIGWDAWSVVKTVKGKELEYVVARHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ +PVL + +G Y + PG G+
Sbjct: 305 SLVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFAGM 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 364 FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E ++PE + + + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 424 AIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TIEHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + S N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDSGSSHQAVLVERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 543 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V I
Sbjct: 603 -----------VPA------------------KVMEQFGADILRLWVAS-VDYQADVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R++LG L + + ++ VD YML +L + +
Sbjct: 633 DHILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPIGELGEVDRYMLAKLNKLIAKVKK 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + +F ELSAFY + KD LY ++ + AR + L+ L +
Sbjct: 693 AYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADSRARRAVQTVLYETVVALAK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSS 1025
+API+PH A+EV+ H+P+R+ S
Sbjct: 753 LIAPILPHTADEVWEHIPNRRENVES 778
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 226/396 (57%), Gaps = 12/396 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKILKDI +R + G YVPGW
Sbjct: 35 DIYRKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L K +S + RK+ + +A E I+ Q+ +F+ GV DW+ N Y
Sbjct: 95 DTHGLPIETALAKQGVDRKSMSVAEFRKRCEQYAYEQIDNQRRQFKRLGVRGDWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ +LEG D +IWTTTPW++PAN IA +P L+Y V V G +VA L E
Sbjct: 213 PVKNGKG-VLEG--DERIVIWTTTPWTIPANLAIAVHPDLDYHVVDVSGKRYVVAAALAE 269
Query: 244 SLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ D VV G+ L+ + HP +RD ++ V++ GTG VH AP
Sbjct: 270 SVAKEIGWDAWSVVKTVKGKELEYVVARHPFY--ERDSLVVCGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ +PVL + +G Y + PG G+ K L E L
Sbjct: 328 HGEDDFLVGQKYGLPVLCPVDERG-YMTEEAPGFAGMFYEDANKAITQKLEEVGALLKLG 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTK+P I +A+ QWF ++I+ E L
Sbjct: 387 FITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELL 422
Score = 109 bits (273), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Query: 1110 TNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKA 1168
++ Y + PG G+ K L E L + HSYP+DWRTK+P I +A
Sbjct: 347 VDERGYMTEEAPGFAGMFYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIFRA 406
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY- 1227
+ QWF ++I+ E L ++ ++PE + + + + R WCISRQR WGVPIPVFY
Sbjct: 407 TTQWFASIDKIRNELLQAIKETKWIPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYG 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 467 ENGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 502
Score = 48.1 bits (113), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 1026 FCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1085
FC ++ Y +AK ILY ++ + AR + L+ L + +API+PH A+EV+
Sbjct: 709 FCTVELSAFYL-DMAKDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWE 767
Query: 1086 HLPSRQGTFSS 1096
H+P+R+ S
Sbjct: 768 HIPNRRENVES 778
>gi|423137732|ref|ZP_17125375.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
gi|371959201|gb|EHO76893.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 933
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/622 (33%), Positives = 341/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ANFDYGLYKTEKGNLILAKDLAESAFKDIGIKNFELIKEFKGKDLEYTTYKHPFL--ERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++ LA K+PV++ I ++G + +AG +GL
Sbjct: 313 GLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + +L + +L + HSYP+DWR+K PVI +A++QWFI E ++
Sbjct: 373 VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W + E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKTPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NIL + ++IR++ RY+LG ++ + T + +D + L +L + +
Sbjct: 643 RISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ AEE++ LP+
Sbjct: 763 LTKMIAPILSFTAEEIWESLPA 784
Score = 303 bits (776), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 234/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SK + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVSKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DH S SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNANFDYGLYKTEKGNLILAKDLAESAFKDIGIKNFEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQ+D+++ LA K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + +L + +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + +L + +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLRERTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKTPEELI 514
>gi|229140544|ref|ZP_04269099.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|228643105|gb|EEK99381.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
Length = 913
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 325/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V G I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYAIVKVNGEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL ++ N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHSGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V G I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNGEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 414
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 339 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 397
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 398 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 457
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 458 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|260495297|ref|ZP_05815424.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
gi|260197075|gb|EEW94595.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
Length = 933
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/622 (33%), Positives = 341/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ANFDYGLYKTEKGNLILAKDLAESAFKDIGIKNFELIKEFKGKDLEYTTYKHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++ LA K+PV++ I ++G + +AG +GL
Sbjct: 313 GLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + +L + +L + HSYP+DWR+K PVI +A++QWFI E ++
Sbjct: 373 VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W + E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKTPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NIL + ++IR++ RY+LG ++ + T + +D + L +L + +
Sbjct: 643 RISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ AEE++ LP+
Sbjct: 763 LTKMIAPILSFTAEEIWESLPA 784
Score = 303 bits (775), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 234/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SK + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVSKAREMSALEIRKLCEKYAKKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DH S SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNANFDYGLYKTEKGNLILAKDLAESAFKDIGIKNFEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQ+D+++ LA K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + +L + +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + +L + +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLRERTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKTPEELI 514
>gi|403667695|ref|ZP_10932995.1| isoleucyl-tRNA synthetase 1 [Kurthia sp. JC8E]
Length = 926
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 222/619 (35%), Positives = 332/619 (53%), Gaps = 61/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SI++ K+ L D +IWTTTPW++PAN I+ N
Sbjct: 192 SALAEAEIEYK-DIKSPSIFVAFKVEDGKGVL---NNDEELVIWTTTPWTMPANLGISVN 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P Y VA V +VAK L+ E W D+ + + G L++IT HP+
Sbjct: 248 PEFTYVVAKVADRKFVVAKELLNTVAEKNGWE---DVQIDREINGASLENITAKHPLF-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V+ GTG VH AP HG+DD+ + + +L+++ N+G + AG
Sbjct: 303 DRTSLVMLGDHVTLEAGTGCVHTAPGHGEDDYQVGKRYGLEILSVVDNRGILTEAAGE-F 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ K L E L + + +HSYP+DWRTKKPVI +A+ QWF E+ +P
Sbjct: 362 AGMFYDKANKPICEKLEEVGALLSLTFFEHSYPHDWRTKKPVIFRATPQWFASIEKFRPA 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L + + NF PE + L + I R WCISRQR WGVPIPVFY +G++II E I
Sbjct: 422 LLQAIRDTNFTPEWGETRLFNMIRDRGDWCISRQRAWGVPIPVFYAENGESIITEET-IA 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L E+G + W+ + ++LL + N TK NDI+D+WFDSG S VL +
Sbjct: 481 HVQDLFRENGSNIWFQKTAKELLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSHQGVLAE 540
Query: 766 K----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+ PA +Y+EG DQ GWF SSL+TSVA AP++ + HGFV+D G KMSKS+GN
Sbjct: 541 RGMNYPADLYLEGSDQYRGWFNSSLITSVATNGHAPYKGLLSHGFVLDGDGRKMSKSLGN 600
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
+I+ AK + YG D+LR WVA+ V
Sbjct: 601 IIAP-----------------------------AKIMQQYGADILRMWVAS-VDYTADVR 630
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I ++L + +K+R++L+++ G L + + T + R VD YM +L + T+
Sbjct: 631 ISMDMLKQVSEMYRKVRNTLKFVHGNLADFNYETDYVKYEDLREVDQYMYMQLQKLVQTV 690
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
T Y +++A + + NF+ ELS+FY + KD +Y ++ N AR + L + + L
Sbjct: 691 RTAYDNYEFATVYKAINNFIATELSSFYLDIAKDVVYVEAPNNHARRAMQSVLFDTLNAL 750
Query: 998 LRTVAPIMPHLAEEVYSHL 1016
++ +API+PH A+E++ ++
Sbjct: 751 VKLLAPIIPHTADEIFGYM 769
Score = 279 bits (714), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 230/393 (58%), Gaps = 20/393 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E + F+LHDGPPYANG H+GHA+NK+LKD+ R + G V YVPGWD HGLPI
Sbjct: 43 ERTKDRTPFVLHDGPPYANGDIHMGHALNKVLKDMINRHRSMTGYYVPYVPGWDTHGLPI 102
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T+K K +S D R+ K +AL+ +N Q+ +F+ G+ ADWE N Y T + E+
Sbjct: 103 E-QALTNKGHDRKKMSIADFRELCKEYALDQVNNQREQFKRIGIRADWE-NPYITLNPEF 160
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F ++ K+ YI++ LKPVYWSPSS +ALAE+E+EYK D S SI++ K+
Sbjct: 161 EARQIGVFGDMAKKGYIFKGLKPVYWSPSSESALAEAEIEYK-DIKSPSIFVAFKVEDGK 219
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK--- 246
L D +IWTTTPW++PAN I+ NP Y VA V +VAK L+ ++
Sbjct: 220 GVL---NNDEELVIWTTTPWTMPANLGISVNPEFTYVVAKVADRKFVVAKELLNTVAEKN 276
Query: 247 -WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W D+++ + G L++IT HP+ R ++ V+ GTG VH AP HG+
Sbjct: 277 GW---EDVQIDREINGASLENITAKHPLF--DRTSLVMLGDHVTLEAGTGCVHTAPGHGE 331
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQ 364
DD+ + + +L+++ N+G + AG G+ K L E L + ++
Sbjct: 332 DDYQVGKRYGLEILSVVDNRGILTEAAGE-FAGMFYDKANKPICEKLEEVGALLSLTFFE 390
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E+ +P L
Sbjct: 391 HSYPHDWRTKKPVIFRATPQWFASIEKFRPALL 423
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
++HSYP+DWRTKKPVI +A+ QWF E+ +P L + NF PE + L + I R
Sbjct: 389 FEHSYPHDWRTKKPVIFRATPQWFASIEKFRPALLQAIRDTNFTPEWGETRLFNMIRDRG 448
Query: 1210 YWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WCISRQR WGVPIPVFY +G++II E I H L E+G + W+ ++LL
Sbjct: 449 DWCISRQRAWGVPIPVFYAENGESIITEET-IAHVQDLFRENGSNIWFQKTAKELL 503
>gi|206976763|ref|ZP_03237667.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217961316|ref|YP_002339884.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
gi|222097341|ref|YP_002531398.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
gi|375285821|ref|YP_005106260.1| isoleucyl-tRNA synthetase [Bacillus cereus NC7401]
gi|423353599|ref|ZP_17331226.1| isoleucyl-tRNA synthetase [Bacillus cereus IS075]
gi|423374307|ref|ZP_17351645.1| isoleucyl-tRNA synthetase [Bacillus cereus AND1407]
gi|423567208|ref|ZP_17543455.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A12]
gi|254782366|sp|B7HLM9.1|SYI_BACC7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|254782367|sp|B9IVX2.1|SYI_BACCQ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|206745073|gb|EDZ56476.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217068263|gb|ACJ82513.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
gi|221241399|gb|ACM14109.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus cereus
Q1]
gi|358354348|dbj|BAL19520.1| isoleucyl-tRNA synthetase [Bacillus cereus NC7401]
gi|401089412|gb|EJP97583.1| isoleucyl-tRNA synthetase [Bacillus cereus IS075]
gi|401094219|gb|EJQ02301.1| isoleucyl-tRNA synthetase [Bacillus cereus AND1407]
gi|401214296|gb|EJR21026.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A12]
Length = 921
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 325/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V G I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNGEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL ++ N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHSGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V G I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNGEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|15615108|ref|NP_243411.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
gi|81786425|sp|Q9K9V0.1|SYI_BACHD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|10175165|dbj|BAB06264.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
Length = 921
Score = 368 bits (944), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 227/619 (36%), Positives = 331/619 (53%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + L + D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYH-DKRSPSIYVAFPVKDGKNVLQQ---DEKIVIWTTTPWTIPANLGIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +VKG +VA LVE L+ + + +++ G L+ + HPI RD
Sbjct: 247 PELEYSVVAVKGEKYVVASGLVETLESALEWENPEILRTIKGVDLEYVVAEHPIYG--RD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG++D+++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVVLGDHVTLDAGTGCVHTAPGHGEEDYIVGQKYGLDVLCPVDDKGYMTAEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSY +DWRTKKPVI +A+ QWF E + E L
Sbjct: 364 FYDEANKPITQKLDECGALLKLTFITHSYAHDWRTKKPVIYRATAQWFASIENFRDELLR 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++EV +VPE + L + + R WCISRQRVWGVPIP+FY +G+ II +E I H
Sbjct: 424 AIQEVKWVPEWGETRLYNMVRDRGDWCISRQRVWGVPIPIFYGENGEPIITDE-TINHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK---- 764
L +HG + W+ + LL + S N T+ DI+D+WFDSG S VL
Sbjct: 483 ELFRKHGSNVWFEWETKDLLPEGFTHESSPNGQFTREMDIMDVWFDSGSSHQGVLVEREE 542
Query: 765 -DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
D+PA +Y+EG DQ GWF SSL TSVA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 543 LDRPADLYLEGSDQYRGWFNSSLSTSVAITGKAPYKGVLSHGFTLDGEGKKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+D+ + G D+LR WVA+ V +
Sbjct: 603 IPNDV-----------------------------MKQLGADILRLWVAS-VDYQADVRVS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG LH+ +T ++ +D YML +L + N +
Sbjct: 633 DKILKQVSEVYRKIRNTYRFLLGNLHDFHPATHRVAIDQLNGLDRYMLAKLNDVINRVKK 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+Q++ L NF ELS+FY + KD LY + R + ++++ L +
Sbjct: 693 AYDEYQFSTVYHELHNFCTIELSSFYMDIAKDTLYVKHADHPDRRATQTVMYDVLVALAK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
++PI+PH A+EV+ H+P
Sbjct: 753 LLSPIIPHTADEVWKHIPG 771
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 227/396 (57%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y + G+P F+LHDGPPYANG H+GHA+NK+LKD+ +R + G YVPGWD
Sbjct: 36 IYEKVQARTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDMIVRYKSMAGFHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T K +S + RK + FA + I+ Q+ +F GV DW N Y
Sbjct: 96 THGLPIE-QALTKSGVDRKSMSVAEFRKLCEEFARKQIDRQREQFMRLGVRGDW-WNPYV 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T DK + Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 154 TLDKGFEAQQVKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYH-DKRSPSIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L + D +IWTTTPW++PAN IA +P LEYSV +VKG +VA LVE
Sbjct: 213 PVKDGKNVLQQ---DEKIVIWTTTPWTIPANLGIAVHPELEYSVVAVKGEKYVVASGLVE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+L+ + + E++ G L+ + HPI RD ++ V+ GTG VH AP
Sbjct: 270 TLESALEWENPEILRTIKGVDLEYVVAEHPIYG--RDSLVVLGDHVTLDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG++D+++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEEDYIVGQKYGLDVLCPVDDKGYMTAEA-PGFEGLFYDEANKPITQKLDECGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSY +DWRTKKPVI +A+ QWF E + E L
Sbjct: 387 FITHSYAHDWRTKKPVIYRATAQWFASIENFRDELL 422
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSY +DWRTKKPVI +
Sbjct: 347 VDDKGYMTAEA-PGFEGLFYDEANKPITQKLDECGALLKLTFITHSYAHDWRTKKPVIYR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L ++ V +VPE + L + + R WCISRQRVWGVPIP+FY
Sbjct: 406 ATAQWFASIENFRDELLRAIQEVKWVPEWGETRLYNMVRDRGDWCISRQRVWGVPIPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L +HG + W+ + LL
Sbjct: 466 GENGEPIITDE-TINHVSELFRKHGSNVWFEWETKDLL 502
>gi|171694870|ref|XP_001912359.1| hypothetical protein [Podospora anserina S mat+]
gi|170947677|emb|CAP59839.1| unnamed protein product [Podospora anserina S mat+]
Length = 982
Score = 368 bits (944), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 339/652 (51%), Gaps = 63/652 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLN---QVPAHLLEGA---TDLHALIWTTTPWSLPA 470
TALAE+ELEY H+SKS ++++ + Q LEG L+A+IWTTTPW+LPA
Sbjct: 190 ATALAEAELEYNEAHVSKSAWVRLPIVSGWQEVISGLEGVDKDAKLYAVIWTTTPWTLPA 249
Query: 471 NQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHP 529
NQ IA + YS+ + + E +I +V+ G L + Y++P
Sbjct: 250 NQAIAVRDDMTYSIVRFADYEGLHLVSIPEGSAGGDLPEISEVLGKVQGSELTRLRYLNP 309
Query: 530 INKEQRDLKLLP---AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
+ + L+ P A FV GTG+VHCAP HG DD+L A IP ++ + N+G+++
Sbjct: 310 LLDDLTALEGRPIIHAPFVRGDSGTGMVHCAPGHGFDDYLACEALGIPAVSHVDNEGRFT 369
Query: 587 PDAGPG----LEGLNILGDGKDQVLHLVEPD---VLWTENYQHSYPYDWRTKKPVILKAS 639
A P L G+ +L G D VL L+ + +L + Y+H YPYDWRTKKP+I++A+
Sbjct: 370 DKAYPRNPDLLGGIPVLEGGSDAVLDLLGNENGYILKVKYYKHKYPYDWRTKKPIIIRAT 429
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG 699
QWF D IK +ALA LEEV FVPE+ K L + R WCISRQR WGVPIP YD
Sbjct: 430 AQWFADVGSIKEQALAALEEVRFVPETGKNRLEAFVKGRSEWCISRQRSWGVPIPALYDA 489
Query: 700 D-TIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL----NTSDVNSNVTKSNDILDIWFD 754
+ +V + +I H ++I E D WW + D + + D +D+WFD
Sbjct: 490 NGNAVVTDESIDHIISVIRERKIDAWWFDDAHDPAWLPESLRDRAAEFRRGQDTMDVWFD 549
Query: 755 SGISWSHVLKDKPAHVYMEGMDQINGWFMSSLLTSVALK---------------HTAPFR 799
SG SW+ DK A VY+EG DQ GWF SSLLT VA +PF+
Sbjct: 550 SGSSWTQT--DKQADVYLEGSDQHRGWFQSSLLTRVAAMVAQDAPGGSSTTNTLGLSPFK 607
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+ HGF +D+ G KMSKS+GN+ISA+++ G+ + + + ++
Sbjct: 608 TLITHGFTLDKDGKKMSKSLGNIISANEVMDGSLLFEPPQ-------AGQPQGRKNREPE 660
Query: 860 AYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG- 916
A G D LR W+ AS D T + +GK +L + + K R+ ++ G + + +
Sbjct: 661 ALGPDALRLWI---ASSDYTGDIILGKPVLRTVHQVLLKYRTIIKMFTGSMQPDARTAPL 717
Query: 917 SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
+++ ++ + LK + + Y +++ +A L +VVN++SAFY +KDRLYC
Sbjct: 718 TVADHIALIQLK---DVMQEVGKYYDNYEFNKAQAALSRWVVNDVSAFYLETLKDRLYCG 774
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
G L IF+ LLR +AP+ P L EE + + P +S H
Sbjct: 775 DSGG--------VLEPIFNGLLRMLAPVTPVLVEEAWEYRPQWMKDDASLVH 818
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/413 (43%), Positives = 243/413 (58%), Gaps = 20/413 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+ Y WQ EF+LHDGPPYANG H GHA+NKILKD+ R + QG+RV YVPGW
Sbjct: 35 DFYEWQAANRPADNEFLLHDGPPYANGELHAGHALNKILKDMINRVKVQQGRRVKYVPGW 94
Query: 66 DCHGLPIELKAITSKD--KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
DCHGLPIE+K + + + K +SP IRK A+ A T+ Q F+S+ V+ADWE N +
Sbjct: 95 DCHGLPIEMKVVEAAEGGKKMSPGGIRKAARKLASSTVKAQMNSFKSYAVMADWE-NRWT 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T D E+ QL F + ++ IYR KPVYWSPSS TALAE+ELEY HVSKS ++++
Sbjct: 154 TMDTEFEIRQLRLFQKMAQRGLIYRKHKPVYWSPSSATALAEAELEYNEAHVSKSAWVRL 213
Query: 184 KLN---QVPAHLLEGA---TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 237
+ Q LEG L+A+IWTTTPW+LPANQ IA + YS+ +
Sbjct: 214 PIVSGWQEVISGLEGVDKDAKLYAVIWTTTPWTLPANQAIAVRDDMTYSIVRFADYEGLH 273
Query: 238 AKCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLP---AGFVSSSKG 293
+ E +I EV+ G L + Y++P+ + L+ P A FV G
Sbjct: 274 LVSIPEGSAGGDLPEISEVLGKVQGSELTRLRYLNPLLDDLTALEGRPIIHAPFVRGDSG 333
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQV 349
TG+VHCAP HG DD+L A IP ++ + N+G+++ A P L G+ +L G D V
Sbjct: 334 TGMVHCAPGHGFDDYLACEALGIPAVSHVDNEGRFTDKAYPRNPDLLGGIPVLEGGSDAV 393
Query: 350 LHLVEPD---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
L L+ + +L + Y+H YPYDWRTKKP+I++A+ QWF D IK +AL
Sbjct: 394 LDLLGNENGYILKVKYYKHKYPYDWRTKKPIIIRATAQWFADVGSIKEQALAA 446
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD---VLWTENYQHSYPYDWRTK 1161
+ N+G+++ A P L G+ +L G D VL L+ + +L + Y+H YPYDWRTK
Sbjct: 362 VDNEGRFTDKAYPRNPDLLGGIPVLEGGSDAVLDLLGNENGYILKVKYYKHKYPYDWRTK 421
Query: 1162 KPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGV 1221
KP+I++A+ QWF D IK +ALA LE V FVPE+ K L + R WCISRQR WGV
Sbjct: 422 KPIIIRATAQWFADVGSIKEQALAALEEVRFVPETGKNRLEAFVKGRSEWCISRQRSWGV 481
Query: 1222 PIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWW 1255
PIP YD + +V + +I H ++I E D WW
Sbjct: 482 PIPALYDANGNAVVTDESIDHIISVIRERKIDAWW 516
>gi|322712116|gb|EFZ03689.1| isoleucine-tRNA ligase [Metarhizium anisopliae ARSEF 23]
Length = 954
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 227/623 (36%), Positives = 326/623 (52%), Gaps = 44/623 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKI----KLNQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH+S Y++ L+ +PA L ++A IWTTTPW+LPAN+
Sbjct: 190 TALAEAELEYREDHVSHVAYVRFPIVSDLSSIPA-LAGFDGPIYAAIWTTTPWTLPANKA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPI-N 531
IA + L YS+ V ++V + ++ ++V D G + + Y + +
Sbjct: 249 IAVHDELLYSLLRVGDYGLLVGSSRADAMR-ELLPPFEIVADSIYGSEIAGLRYRNALRG 307
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
K + ++ A FVS+ GTGLVH AP HGQDD+ I IT++G ++ +A P
Sbjct: 308 KSAAEQPIVHADFVSADSGTGLVHMAPGHGQDDYEACARLGIEAFAPITDEGFFTQEAYP 367
Query: 592 GLEGL-----NILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
L +IL G VL L++ DVL T + QH YPYDWRTK+PV+++A+ QWF D
Sbjct: 368 DQPDLLTGAPSILEGGGKAVLELIKEDVLATHDIQHKYPYDWRTKQPVVVRATAQWFTDV 427
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD-GDTIIVN 705
RIK +L L V FVPES + L + R WCISRQR WGVPIP YD +++
Sbjct: 428 GRIKEGSLKALSNVRFVPESGRSRLESFVKGRSEWCISRQRSWGVPIPALYDEAGNAVMD 487
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
E I+H +++ + W+S V+ +++ + D +D+WFDSG SW +
Sbjct: 488 EETIEHIISVMQQRTSQAWFSDPVDDPAWVPANLQGRYRRGTDTMDVWFDSGTSWMEI-- 545
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVALKHT---------APFRNVFLHGFVVDEKGAKM 815
+P VY+EG DQ GWF SSLLT VA + PFR + HGF +D +G KM
Sbjct: 546 GQPVDVYLEGSDQHRGWFQSSLLTYVASQKADGVSDADIQPPFRTLITHGFTLDAQGKKM 605
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GN I ++ G P +S G ++ A + A G D LR W AA
Sbjct: 606 SKSLGNTIIPEEVIDGRLLPPLKGQSKGG-------SKEAPRFDALGADALRLW-AASCD 657
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQN 935
+ IG +IL + + K R+ L+ +LG LH S S VD + +L +
Sbjct: 658 FTSDILIGPSILQPIHNALIKYRTILKMVLGSLHESSRSAPLTK--VDQMAIAQLSDTMA 715
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ +++ +A+ ++ +V +LSAFY +KDRLYC G L IF
Sbjct: 716 QVWEAVNNYEFHKATGLINRWVATDLSAFYLEALKDRLYCGDGGG--------ALEPIFI 767
Query: 996 VLLRTVAPIMPHLAEEVYSHLPS 1018
LR +API P L EE +SH PS
Sbjct: 768 GFLRMLAPITPVLVEEAWSHRPS 790
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/412 (44%), Positives = 249/412 (60%), Gaps = 17/412 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ +F+LHDGPPYANG HIGHA+NKILKD+ +RS + GKRV Y P W
Sbjct: 35 DLYQWQTNNRPQNDQFVLHDGPPYANGPLHIGHALNKILKDMIVRSQVQNGKRVVYRPSW 94
Query: 66 DCHGLPIELKAITSKDK-LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE+KA+ S LSP+ +R+ A+ A +TI Q F+S+GV+ADWE N + T
Sbjct: 95 DCHGLPIEMKALGSNTAGGLSPVKVRESARKLASKTITEQMKGFQSFGVMADWE-NKWTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI- 183
D+EY QL F + + IYR KPVYWS SSRTALAE+ELEY+ DHVS Y++
Sbjct: 154 MDREYEIRQLRVFQKMVRHGLIYRKHKPVYWSVSSRTALAEAELEYREDHVSHVAYVRFP 213
Query: 184 ---KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
L+ +PA L ++A IWTTTPW+LPAN+ IA + L YS+ V ++V
Sbjct: 214 IVSDLSSIPA-LAGFDGPIYAAIWTTTPWTLPANKAIAVHDELLYSLLRVGDYGLLVGSS 272
Query: 241 LVESLKWTFQTDIEVVCD-FPGQYLQDITYIHPI-NKEQRDLKLLPAGFVSSSKGTGLVH 298
++++ E+V D G + + Y + + K + ++ A FVS+ GTGLVH
Sbjct: 273 RADAMR-ELLPPFEIVADSIYGSEIAGLRYRNALRGKSAAEQPIVHADFVSADSGTGLVH 331
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL-----NILGDGKDQVLHLV 353
AP HGQDD+ I IT++G ++ +A P L +IL G VL L+
Sbjct: 332 MAPGHGQDDYEACARLGIEAFAPITDEGFFTQEAYPDQPDLLTGAPSILEGGGKAVLELI 391
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+ DVL T + QH YPYDWRTK+PV+++A+ QWF D RIK +L K + N+
Sbjct: 392 KEDVLATHDIQHKYPYDWRTKQPVVVRATAQWFTDVGRIKEGSL--KALSNV 441
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 95/158 (60%), Gaps = 6/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGL-----NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
IT++G ++ +A P L +IL G VL L++ DVL T + QH YPYDWRTK+P
Sbjct: 355 ITDEGFFTQEAYPDQPDLLTGAPSILEGGGKAVLELIKEDVLATHDIQHKYPYDWRTKQP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+++A+ QWF D RIK +L L V FVPES + L + R WCISRQR WGVPI
Sbjct: 415 VVVRATAQWFTDVGRIKEGSLKALSNVRFVPESGRSRLESFVKGRSEWCISRQRSWGVPI 474
Query: 1224 PVFYD-GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
P YD +++E I+H +++ + W+S PV+
Sbjct: 475 PALYDEAGNAVMDEETIEHIISVMQQRTSQAWFSDPVD 512
>gi|336401824|ref|ZP_08582581.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 21_1A]
gi|336160422|gb|EGN63470.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 21_1A]
Length = 933
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/625 (33%), Positives = 342/625 (54%), Gaps = 60/625 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQT----DIDVVCDFPGQYLQDITYIHPINKE 533
+Y + + N+I+AK L E+ F+ + +++ +F G+ L+ TY HP
Sbjct: 255 ANFDYGLYKTEKGNLILAKDLAES---AFEDIGIGNFELIKEFKGKDLEYTTYKHPFL-- 309
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+R ++ V++ GTG VH AP HGQ+D+++ LA K+PV++ I ++G + +AG
Sbjct: 310 ERTGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLF 369
Query: 594 EGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIK 650
+GL K + +L + +L + HSYP+DWR+K PVI +A++QWFI E ++
Sbjct: 370 KGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLR 429
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++
Sbjct: 430 ERTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEI 489
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDV------NSNVTKSNDILDIWFDSGISWSHV 762
+ C L+ EHG + W S E+L+ + + K +I+D+WFDSG S V
Sbjct: 490 LDRICGLVREHGSNIWVEKSPEELIGEELLVKYNLKGLKLRKETNIMDVWFDSGSSHRGV 549
Query: 763 LK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
L+ +PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSK
Sbjct: 550 LEVWEGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSK 609
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GN +S D+ + YG D+LR W + +D
Sbjct: 610 SLGNTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD 640
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
V I NIL + ++IR++ RY+LG ++ + T + +D + L +L
Sbjct: 641 -DVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYKDMLEIDKWALNKLEVL 699
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ ++ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 700 KRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEV 759
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ AEE++ LP+
Sbjct: 760 LMTLTKMIAPILSFTAEEIWESLPA 784
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/379 (43%), Positives = 235/379 (62%), Gaps = 16/379 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SK + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVSKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DH S SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHTSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQT----D 252
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES F+ +
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNANFDYGLYKTEKGNLILAKDLAES---AFEDIGIGN 287
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
E++ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQ+D+++ L
Sbjct: 288 FELIKEFKGKDLEYTTYKHPF--LERTGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGL 345
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDW 371
A K+PV++ I ++G + +AG +GL K + +L + +L + HSYP+DW
Sbjct: 346 AYKLPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDW 405
Query: 372 RTKKPVILKASQQWFIDTE 390
R+K PVI +A++QWFI E
Sbjct: 406 RSKTPVIFRATEQWFIRME 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + +L + +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLRERTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ EHG + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIWVEKSPEELI 514
>gi|342320418|gb|EGU12358.1| Hypothetical Protein RTG_01380 [Rhodotorula glutinis ATCC 204091]
Length = 1081
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 240/697 (34%), Positives = 355/697 (50%), Gaps = 105/697 (15%)
Query: 400 KTVGNILGR-VGITHDRPG-------TALAESELEYKPDHISKSIYLKIKLNQVPAHL-- 449
+ V +++GR + +TH RP TALAE+ELEY+ DH S+S+Y+ + V L
Sbjct: 212 RVVRDMVGRGLIVTHHRPTLYSPSSRTALAEAELEYREDHTSRSVYVAFPVEDVGDKLER 271
Query: 450 -LEGA---------TDLHALIWTTTPWSLPANQFIAFNPALEYSVA---SVKGANVIVAK 496
LE A L +WTTT W++P+N IA +P LEYS+ S + IVA
Sbjct: 272 ELEKADVSLSEEEKRGLGLAVWTTTAWTVPSNVAIAVSPTLEYSLVRNPSSPSSLFIVAT 331
Query: 497 CLVENLKWTFQTD--IDVVCDFPGQYLQDITYIHPINKEQRDLK---LLPAGFVSSSKGT 551
++ L + + + FPG L TYI P++ + ++PA +V+S+ GT
Sbjct: 332 ERLDALSELIGSSEALQTIATFPGSSLLSTTYIDPLSSASHTAQPRPIIPADYVTSTTGT 391
Query: 552 GLVHCAPAHGQDDF------------------LLALAEKIPVLNLITNQGKYSPDAGPGL 593
GLVH APAHG +D+ L + L+ + D L
Sbjct: 392 GLVHTAPAHGIEDWEAWRSYHASTNPSSPAPDTLCAVDADGRLDRTLEEMGIEKDVVERL 451
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G ++L DG +V+ L+E ++ QH +PYDWRTKKPVI +AS QWF + + IK
Sbjct: 452 VGKDVLKDGAGEVIRLLEERGRLIKEVEVQHKFPYDWRTKKPVIFRASSQWFANLDPIKQ 511
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY----DG---DTIIV 704
A++ L VNF P +TL ++ R WCISRQR WGVPIPV Y DG + ++
Sbjct: 512 SAISALSHVNFFPSRGSRTLEMYVSGRSEWCISRQRAWGVPIPVVYSRAKDGSGKEEPLL 571
Query: 705 NEANIKHFCTLIDEH-GPDFWWSLSVE-----QLLNTSDVNSNV-TKSNDILDIWFDSGI 757
+N+ H +++ + G D+WW+ + E Q+L S V K D +D+WFDSG
Sbjct: 572 TPSNVDHIVEVLERNGGTDYWWTGAAEEFVEPQMLEQSRREGRVWRKGTDTMDVWFDSGC 631
Query: 758 SWSHVLKDK-------------PAHVYMEGMDQINGWFMSSLLTSVA-----LKHTAPFR 799
SW+ + ++ A VY EG DQ GWF SSLLT VA ++ +AP+
Sbjct: 632 SWTLLREEGVQPASADGKEHAHAADVYFEGSDQHRGWFQSSLLTKVASTPDGVEPSAPYN 691
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
++ HG V+DE G KMSKS+GNV+S + +G + A P
Sbjct: 692 DLVTHGMVLDEHGRKMSKSLGNVMSPKVVIEGG--------------------EAADLDP 731
Query: 860 AYGVDVLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI 918
AYG D+LR WVA+ +S+D V IG+NIL + D +KIR++ R+LLG L + ++
Sbjct: 732 AYGTDLLRVWVASVDSSRD--VLIGRNILAQTFDGFRKIRNTARFLLGNLADQPREDFAL 789
Query: 919 SR--YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
+ ++ Y+L L + T + +++ +A + L F LS+FYF + KD LY D
Sbjct: 790 EQLSLIERYILHELYQLDKTARQAFSAYEFNKAYQALSAFSNTTLSSFYFEITKDTLYAD 849
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
S R L L +F + +API P L EE++
Sbjct: 850 SSTSLFRRKTLFVLQKVFDTYVSVLAPIAPLLGEEIH 886
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/435 (39%), Positives = 239/435 (54%), Gaps = 45/435 (10%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY WQ + + +P F+LHDGPPYANG H GHA+NKI KD+ RS L+QG RVHY PG+
Sbjct: 82 ELYEWQAKQKD-RPLFVLHDGPPYANGHLHCGHALNKITKDLINRSKLIQGYRVHYTPGF 140
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLP+ELKA++S L+P IR A+ A + I QK EF S+ V+ DWE Y
Sbjct: 141 DTHGLPLELKALSSLSTPHSCLTPSQIRSAARAEAEKGIEIQKEEFRSFAVMGDWERP-Y 199
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D E+ + QL ++ + I +P +SPSSRTALAE+ELEY+ DH S+S+Y+
Sbjct: 200 RTMDWEFERRQLRVVRDMVGRGLIVTHHRPTLYSPSSRTALAEAELEYREDHTSRSVYVA 259
Query: 183 IKLNQVPAHL---LEGA---------TDLHALIWTTTPWSLPANQFIAFNPALEYSVA-- 228
+ V L LE A L +WTTT W++P+N IA +P LEYS+
Sbjct: 260 FPVEDVGDKLERELEKADVSLSEEEKRGLGLAVWTTTAWTVPSNVAIAVSPTLEYSLVRN 319
Query: 229 -SVKGANVIVAKCLVESLKWTFQTD--IEVVCDFPGQYLQDITYIHPINKEQRDLK---L 282
S + IVA +++L + ++ + FPG L TYI P++ + +
Sbjct: 320 PSSPSSLFIVATERLDALSELIGSSEALQTIATFPGSSLLSTTYIDPLSSASHTAQPRPI 379
Query: 283 LPAGFVSSSKGTGLVHCAPAHGQDDF------------------LLALAEKIPVLNLITN 324
+PA +V+S+ GTGLVH APAHG +D+ L + L+
Sbjct: 380 IPADYVTSTTGTGLVHTAPAHGIEDWEAWRSYHASTNPSSPAPDTLCAVDADGRLDRTLE 439
Query: 325 QGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKAS 382
+ D L G ++L DG +V+ L+E ++ QH +PYDWRTKKPVI +AS
Sbjct: 440 EMGIEKDVVERLVGKDVLKDGAGEVIRLLEERGRLIKEVEVQHKFPYDWRTKKPVIFRAS 499
Query: 383 QQWFIDTERIKPEAL 397
QWF + + IK A+
Sbjct: 500 SQWFANLDPIKQSAI 514
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 1096 SFCHFKVYHHLNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHS 1153
+ C L+ + D L G ++L +G +V+ L+E ++ QH
Sbjct: 424 TLCAVDADGRLDRTLEEMGIEKDVVERLVGKDVLKDGAGEVIRLLEERGRLIKEVEVQHK 483
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
+PYDWRTKKPVI +AS QWF + + IK A++ L VNF P ++L ++ R WCI
Sbjct: 484 FPYDWRTKKPVIFRASSQWFANLDPIKQSAISALSHVNFFPSRGSRTLEMYVSGRSEWCI 543
Query: 1214 SRQRVWGVPIPVFY----DG---DTIIVNEANIKHFCTLIDEH-GPDFWWSLPVEQLLN 1264
SRQR WGVPIPV Y DG + ++ +N+ H +++ + G D+WW+ E+ +
Sbjct: 544 SRQRAWGVPIPVVYSRAKDGSGKEEPLLTPSNVDHIVEVLERNGGTDYWWTGAAEEFVE 602
>gi|385837521|ref|YP_005875151.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
gi|358748749|gb|AEU39728.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
Length = 901
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 224/643 (34%), Positives = 338/643 (52%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K L E D+ +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAH 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV +V ++A + + E L+W + +V+ G L+ + HP
Sbjct: 247 PDYDYSVVAVNNRKFVIASEMLEAVAEKLEWE---NPEVLQTLKGSDLEYMVAKHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ A +V+ GTGLVH AP HG+DD+ + K+PVL+ I N+G Y+ D PGL
Sbjct: 302 DRETLIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ DG V + L E D L E + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQ 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
L +E+V++V K L + + R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 420 NILDEVEKVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPLPIFYGENGEPIITPETT- 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L E G W+ + LL + + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 EHVAKLFAEFGSKVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDSGSSWNGVLN 538
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SS+ TSVA+ AP++ V GFV+D KG KMSKS+
Sbjct: 539 ERDYLSFPADLYLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFVLDGKGRKMSKSI 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I D+T+ +G D+LR WVA+ +
Sbjct: 599 GNTIVPKDVTK-----------------------------KFGADILRLWVAS-IDTESD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + +IL+ + +KIR++LR+L+ + + I R VD YML + E
Sbjct: 629 VRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDGIDFAELRPVDKYMLVKFNELVK 688
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y + + + ++NF+ N+LS+FY KD +Y ++ N R S ++ I
Sbjct: 689 QIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYVILK 748
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L++ + PI+PH AEE +++L F+ + GS
Sbjct: 749 DLVKVLVPILPHTAEETWTYLEHEPENFAYLAEMPEAAEIPGS 791
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 239/396 (60%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY ++E GKP FILHDGPPYANG H+GH++NKI KDI +R + G R YVPGWD
Sbjct: 36 LYEKRQELNEGKPSFILHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K K + LD ++ + +A++ ++ Q+++F+S GVLADW+ Y T
Sbjct: 96 THGLPIEQQLAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDR-PYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++ K
Sbjct: 155 LLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVAFK 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
L E D+ +IWTTTPW++P+N I +P +YSV +V ++A ++E+
Sbjct: 214 AKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPDYDYSVVAVNNRKFVIASEMLEA 270
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+ + + EV+ G L+ + HP R+ ++ A +V+ GTGLVH AP H
Sbjct: 271 VAEKLEWENPEVLQTLKGSDLEYMVAKHPFY--DRETLIMNADYVTLDSGTGLVHVAPGH 328
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-E 361
G+DD+ + K+PVL+ I N+G Y+ D PGLEG+ DG V + L E D L E
Sbjct: 329 GEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLE 386
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 387 FFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNIL 422
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKP 1163
L+ I N+G Y+ D PGLEG+ +G V + L E D L E + HSYP+DWRTKKP
Sbjct: 344 LSPIDNRGYYT-DEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L +E V++V K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRQNILDEVEKVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E +H L E G W+ + LL
Sbjct: 462 PIFYGENGEPIITPETT-EHVAKLFAEFGSKVWFEREAKDLL 502
>gi|423604477|ref|ZP_17580370.1| isoleucyl-tRNA synthetase [Bacillus cereus VD102]
gi|401245097|gb|EJR51455.1| isoleucyl-tRNA synthetase [Bacillus cereus VD102]
Length = 921
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 228/619 (36%), Positives = 327/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V G I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNGEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNH--SESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + SE+T +I+ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 284 bits (726), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V G I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNGEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|125624825|ref|YP_001033308.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|389855202|ref|YP_006357446.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
gi|124493633|emb|CAL98620.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|300071624|gb|ADJ61024.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 932
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 224/644 (34%), Positives = 339/644 (52%), Gaps = 66/644 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K L E D+ +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAH 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV + G ++A + + E L+W + +V+ G L+ + HP
Sbjct: 247 PDYDYSVVADNGRKFVIASEMLEAVAEKLEWE---NPEVLQTIKGSELEYMVAKHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ A +V+ GTGLVH AP HG+DD+ + K+PVL+ I N+G Y+ D PGL
Sbjct: 302 DRETLIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLH--LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EGL D ++V+ L E D L E + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGL--FYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + + R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPLPIFYGENGEPIITPETT 478
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
+H L E G W+ + LL + + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 -EHVAKLFAEFGSKVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDSGSSWNGVL 537
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
++ PA +Y+EG DQ GWF SS+ TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 538 NERDYLSFPADLYLEGSDQYRGWFNSSITTSVAVNGIAPYKAVLSQGFVLDGKGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+T+ +G D+LR WVA+ +
Sbjct: 598 IGNTIVPKDVTK-----------------------------KFGADILRLWVAS-IDTES 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + +IL+ + +KIR++LR+L+ + + I R VD YML + E
Sbjct: 628 DVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDGIDFAELRPVDKYMLVKFNELV 687
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y + + + ++NF+ N+LS+FY KD +Y ++ N R S ++ I
Sbjct: 688 KQIRKAYDNYSFMSVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYVIL 747
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L++ + PI+PH AEE +++L F+ + GS
Sbjct: 748 KDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEMPEAAEIPGS 791
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 240/397 (60%), Gaps = 16/397 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY ++E GKP F+LHDGPPYANG H+GH++NKI KDI +R + G R YVPGWD
Sbjct: 36 LYEKRQELNEGKPSFMLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K K + LD ++ + +A++ ++ Q+++F+S GVLADW+ Y T
Sbjct: 96 THGLPIEQQLAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDR-PYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++ K
Sbjct: 155 LLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVAFK 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
L E D+ +IWTTTPW++P+N I +P +YSV + G ++A ++E+
Sbjct: 214 AKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPDYDYSVVADNGRKFVIASEMLEA 270
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+ + + EV+ G L+ + HP R+ ++ A +V+ GTGLVH AP H
Sbjct: 271 VAEKLEWENPEVLQTIKGSELEYMVAKHPFY--DRETLIMNADYVTLDSGTGLVHVAPGH 328
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDVLWT- 360
G+DD+ + K+PVL+ I N+G Y+ D PGLEGL D ++V+ L E D L
Sbjct: 329 GEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGLEGL--FYDEGNKVVSKWLEEKDALLKL 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 386 EFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNIL 422
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKP 1163
L+ I N+G Y+ D PGLEGL EG V L E D L E + HSYP+DWRTKKP
Sbjct: 344 LSPIDNRGYYT-DEAPGLEGL-FYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L +E V++V K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRQNILDEVEKVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E +H L E G W+ + LL
Sbjct: 462 PIFYGENGEPIITPETT-EHVAKLFAEFGSKVWFEREAKDLL 502
>gi|302842510|ref|XP_002952798.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f. nagariensis]
gi|300261838|gb|EFJ46048.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f. nagariensis]
Length = 1034
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 228/634 (35%), Positives = 325/634 (51%), Gaps = 85/634 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP-------AHLLEGATDLHALIWTTTPWSLPA 470
TALAE+ELEY H S ++Y+ + L V L+GA IWTTTPW++PA
Sbjct: 269 TALAEAELEYPEGHRSTAVYVAMPLVAVGEKAGEEMKQALQGA---GFAIWTTTPWTIPA 325
Query: 471 NQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
N +A N L+Y V+ A+ LV L ++ V+ G L+ +Y HP+
Sbjct: 326 NLAVAVNDQLDYC--------VVEAQELVGRLAEKTGVELKVLATAKGSELEGCSYRHPL 377
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
L ++ ++++ GT PV + G ++ +AG
Sbjct: 378 YDRTSPL-VIGGDYITTETGT----------------------PV----DDAGNFTTEAG 410
Query: 591 PGLEGLNILGDG-KDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P GLN+ G+G K V L E VL E Y+H YPYDWRTKKP I +A+ QWF E
Sbjct: 411 P-FAGLNVQGEGNKAVVAALREAGVLLKDELYEHKYPYDWRTKKPTIFRATSQWFASVEG 469
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNE 706
+ AL + V ++P + + R WCISRQR WGVPIPVFYD +T ++
Sbjct: 470 FRGAALEAIRGVQWIPAAGLNRITGMTEGRSDWCISRQRKWGVPIPVFYDTETDEPLLTS 529
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLLNTS--DVNSNVTKSNDILDIWFDSGISWSHVLK 764
I+H L+ ++G D WW+LSV +LL S + + + D +D+WFDSG SW+ VL+
Sbjct: 530 ETIEHITGLVSQYGSDCWWTLSVSELLPPSLRHLAPRLRRGEDTMDVWFDSGSSWAGVLQ 589
Query: 765 DK--------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
PA +Y+EG DQ GWF SSLLTSVA AP++ V HGFV+DEKG KMS
Sbjct: 590 ADAVWAGLSYPADLYLEGSDQHRGWFQSSLLTSVAANGIAPYKQVLTHGFVLDEKGQKMS 649
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GNV+ + +G K + K+ PAYG DVLR WVA+
Sbjct: 650 KSLGNVVDPRVVIEGGKDV--------------------KQQPAYGADVLRLWVAS-VDY 688
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCE 932
V IG +IL D +K+R +LR+LLG L ++ ++ +D YML R+ +
Sbjct: 689 TSDVAIGSSILRQMADMYRKVRGTLRFLLGNLADYDPQVHAVPYEQLPSLDRYMLFRVSQ 748
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
N + Y +Q+ + + L FV+ +LS FY KDRLY + AR + L
Sbjct: 749 LMNEVSAAYDSYQFFKVFQSLQRFVIVDLSNFYLDTAKDRLYIRRDSDPARRACQTVLDA 808
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ L+ +AP++PHLAE+ + +LP + S F
Sbjct: 809 LLRSLMAALAPLVPHLAEDAWLNLPYARPAASVF 842
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 216/395 (54%), Gaps = 53/395 (13%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
N + LHDGPPYANG HIGHA+NKILKD R LLQG+R +VPGWD HGLPIELK
Sbjct: 121 NTGESYTLHDGPPYANGDLHIGHALNKILKDFINRYQLLQGRRAKFVPGWDTHGLPIELK 180
Query: 76 AITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ S + K L L++R KA+ FAL TI+ Q+ +F+ +GV DW + Y T + Y
Sbjct: 181 VLQSLKEKERKELGVLELRAKAREFALRTIDAQRTQFKRYGVWGDWS-SPYVTLEPSYEA 239
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP-- 189
QL F ++ +IYR LKPV+WSPSSRTALAE+ELEY H S ++Y+ + L V
Sbjct: 240 AQLRVFGKMFLNGHIYRGLKPVHWSPSSRTALAEAELEYPEGHRSTAVYVAMPLVAVGEK 299
Query: 190 -----AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
L+GA IWTTTPW++PAN +A N L+Y V+ A+ LV
Sbjct: 300 AGEEMKQALQGA---GFAIWTTTPWTIPANLAVAVNDQLDYC--------VVEAQELVGR 348
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
L +++V+ G L+ +Y HP+ L ++ ++++ GT
Sbjct: 349 LAEKTGVELKVLATAKGSELEGCSYRHPLYDRTSPL-VIGGDYITTETGT---------- 397
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDG-KDQVLHLVEPDVLWT-EN 362
PV + G ++ +AGP GLN+ G+G K V L E VL E
Sbjct: 398 ------------PV----DDAGNFTTEAGP-FAGLNVQGEGNKAVVAALREAGVLLKDEL 440
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y+H YPYDWRTKKP I +A+ QWF E + AL
Sbjct: 441 YEHKYPYDWRTKKPTIFRATSQWFASVEGFRGAAL 475
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEG-KDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVIL 1166
+ + G ++ +AGP GLN+ GEG K V L E VL E Y+H YPYDWRTKKP I
Sbjct: 399 VDDAGNFTTEAGP-FAGLNVQGEGNKAVVAALREAGVLLKDELYEHKYPYDWRTKKPTIF 457
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF E + AL + GV ++P + + R WCISRQR WGVPIPVF
Sbjct: 458 RATSQWFASVEGFRGAALEAIRGVQWIPAAGLNRITGMTEGRSDWCISRQRKWGVPIPVF 517
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
YD +T ++ I+H L+ ++G D WW+L V +LL S
Sbjct: 518 YDTETDEPLLTSETIEHITGLVSQYGSDCWWTLSVSELLPPS 559
>gi|229198007|ref|ZP_04324721.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
gi|228585486|gb|EEK43590.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
Length = 921
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 324/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V G I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNGEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERND 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 284 bits (726), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V G I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNGEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|342876819|gb|EGU78375.1| hypothetical protein FOXB_11126 [Fusarium oxysporum Fo5176]
Length = 941
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 230/622 (36%), Positives = 332/622 (53%), Gaps = 51/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+EL++ DH+S + Y++ + + +P L + +L+A IWTTTPW+LPAN+
Sbjct: 190 TALAEAELQFVEDHVSTAAYIRFPIISDWSSIP-ELADFKGNLYATIWTTTPWTLPANRA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC-DFPGQYLQDITYIHPINK 532
IA + ++YS+ V +VA V N+K F D VV PG L+ + Y + +
Sbjct: 249 IAIHDQIKYSILQVGDDGYLVASSCVGNMK-RFLGDFQVVAHSIPGSSLKGLEYKNKLRG 307
Query: 533 EQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ + ++ A FV+SS GTGLVH AP HG+DD+ + I I + G ++ +A P
Sbjct: 308 QSAPPQPIITADFVTSSSGTGLVHIAPGHGRDDYEVCSKIGIEAFAPIDDGGFFTEEAYP 367
Query: 592 G-----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
+ +++ G VL LV DVL + +HS+PYDWRTK+PV+ +A+ QWF D
Sbjct: 368 DDPEKLTKASSVMDGGSHAVLELVGDDVLGSHKQRHSFPYDWRTKRPVVTRATAQWFADV 427
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIV 704
IK +AL L++V FVP + L I +R WCISRQR WGVPIP YD G+ ++
Sbjct: 428 GSIKDDALEALKDVRFVPRGGRNRLEAFITRRSEWCISRQRSWGVPIPALYDENGNAVMT 487
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSV-EQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
E I H ++++E W+S E ++ + D +D+WFDSG SW+
Sbjct: 488 TE-TIDHIISVMEERSSSAWFSDDPDEPAWIPPNMEGKYRRGTDTMDVWFDSGSSWTET- 545
Query: 764 KDKPAHVYMEGMDQINGWFMSSLLTSVAL--------KHTAPFRNVFLHGFVVDEKGAKM 815
+ PA VY+EG DQ GWF SSLLT VA K +APF+ + HGF +D KG KM
Sbjct: 546 -EGPADVYLEGSDQHRGWFQSSLLTYVATQTSKETTGKASAPFKTLITHGFTLDGKGKKM 604
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS GN+I +++ +G L + S GN + KL G D +R W AA A
Sbjct: 605 SKSEGNMIVPNEVIKG---LLSQAYSRGNRL----------KLDPLGPDAIRLW-AASAD 650
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQN 935
V IG NIL + K R+ ++ LLG + + E+ S +D L +L + +
Sbjct: 651 FTSDVLIGPNILRPVNASLIKYRTIIKMLLGSI--YPEARQSPLTKLDQMALVQLSDTMS 708
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +F++ RA + +V +LSAFY +KDRLYC G L I
Sbjct: 709 EVMQSYNDFEFYRAVSTINRWVATDLSAFYLEALKDRLYCGDGGG--------VLEPILI 760
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
LR +API P L EE +S P
Sbjct: 761 GFLRMLAPITPMLVEEAWSFRP 782
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 252/404 (62%), Gaps = 15/404 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQ + +G+ F LHDGPPYANG H+GHA+NKILKD+ +R + QG+RV Y PGW
Sbjct: 35 DLYAWQAQNRSGEKPFTLHDGPPYANGELHVGHAMNKILKDMIVRVKVQQGRRVTYRPGW 94
Query: 66 DCHGLPIELKAITS-KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE+KA+ S K L+P+++R A+ A +T+ Q F + V++DWE + T
Sbjct: 95 DCHGLPIEMKALGSHTTKGLTPVEVRDTARKLASKTVVDQMKGFRALAVMSDWEKK-WTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D+EY QL F N+ ++ IYR KPVYWSPSSRTALAE+EL++ DHVS + Y++
Sbjct: 154 MDREYEIRQLRVFQNMVRRGLIYRKHKPVYWSPSSRTALAEAELQFVEDHVSTAAYIRFP 213
Query: 185 L----NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ + +P L + +L+A IWTTTPW+LPAN+ IA + ++YS+ V +VA
Sbjct: 214 IISDWSSIP-ELADFKGNLYATIWTTTPWTLPANRAIAIHDQIKYSILQVGDDGYLVASS 272
Query: 241 LVESLKWTFQTDIEVVC-DFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVH 298
V ++K F D +VV PG L+ + Y + + + + ++ A FV+SS GTGLVH
Sbjct: 273 CVGNMK-RFLGDFQVVAHSIPGSSLKGLEYKNKLRGQSAPPQPIITADFVTSSSGTGLVH 331
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLV 353
AP HG+DD+ + I I + G ++ +A P + +++ G VL LV
Sbjct: 332 IAPGHGRDDYEVCSKIGIEAFAPIDDGGFFTEEAYPDDPEKLTKASSVMDGGSHAVLELV 391
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
DVL + +HS+PYDWRTK+PV+ +A+ QWF D IK +AL
Sbjct: 392 GDDVLGSHKQRHSFPYDWRTKRPVVTRATAQWFADVGSIKDDAL 435
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Query: 1127 NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALAC 1186
+++ G VL LV DVL + +HS+PYDWRTK+PV+ +A+ QWF D IK +AL
Sbjct: 378 SVMDGGSHAVLELVGDDVLGSHKQRHSFPYDWRTKRPVVTRATAQWFADVGSIKDDALEA 437
Query: 1187 LEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCT 1244
L+ V FVP + L I +R WCISRQR WGVPIP YD G+ ++ E I H +
Sbjct: 438 LKDVRFVPRGGRNRLEAFITRRSEWCISRQRSWGVPIPALYDENGNAVMTTE-TIDHIIS 496
Query: 1245 LIDEHGPDFWWS 1256
+++E W+S
Sbjct: 497 VMEERSSSAWFS 508
>gi|116512741|ref|YP_811648.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
gi|116108395|gb|ABJ73535.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
Length = 932
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 224/643 (34%), Positives = 338/643 (52%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K L E D+ +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAH 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV +V ++A + + E L+W + +V+ G L+ + HP
Sbjct: 247 PDYDYSVVAVNNRKFVIASEMLEAVAEKLEWE---NPEVLQTLKGSDLEYMVAKHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ A +V+ GTGLVH AP HG+DD+ + K+PVL+ I N+G Y+ D PGL
Sbjct: 302 DRETLIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ DG V + L E D L E + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQ 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
L +E+V++V K L + + R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 420 NILDEVEKVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPLPIFYGENGEPIITPETT- 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L E G W+ + LL + + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 EHVAKLFAEFGSKVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDSGSSWNGVLN 538
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SS+ TSVA+ AP++ V GFV+D KG KMSKS+
Sbjct: 539 ERDYLSFPADLYLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFVLDGKGRKMSKSI 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I D+T+ +G D+LR WVA+ +
Sbjct: 599 GNTIVPKDVTK-----------------------------KFGADILRLWVAS-IDTESD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + +IL+ + +KIR++LR+L+ + + I R VD YML + E
Sbjct: 629 VRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDGIDFAELRPVDKYMLVKFNELVK 688
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y + + + ++NF+ N+LS+FY KD +Y ++ N R S ++ I
Sbjct: 689 QIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYVILK 748
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L++ + PI+PH AEE +++L F+ + GS
Sbjct: 749 DLVKVLVPILPHTAEETWTYLEHEPENFAYLAEMPEAAEIPGS 791
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 239/396 (60%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY ++E GKP FILHDGPPYANG H+GH++NKI KDI +R + G R YVPGWD
Sbjct: 36 LYEKRQELNEGKPSFILHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K K + LD ++ + +A++ ++ Q+++F+S GVLADW+ Y T
Sbjct: 96 THGLPIEQQLAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDR-PYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++ K
Sbjct: 155 LLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVAFK 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
L E D+ +IWTTTPW++P+N I +P +YSV +V ++A ++E+
Sbjct: 214 AKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPDYDYSVVAVNNRKFVIASEMLEA 270
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+ + + EV+ G L+ + HP R+ ++ A +V+ GTGLVH AP H
Sbjct: 271 VAEKLEWENPEVLQTLKGSDLEYMVAKHPFY--DRETLIMNADYVTLDSGTGLVHVAPGH 328
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-E 361
G+DD+ + K+PVL+ I N+G Y+ D PGLEG+ DG V + L E D L E
Sbjct: 329 GEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLE 386
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 387 FFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNIL 422
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKP 1163
L+ I N+G Y+ D PGLEG+ +G V + L E D L E + HSYP+DWRTKKP
Sbjct: 344 LSPIDNRGYYT-DEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L +E V++V K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRQNILDEVEKVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E +H L E G W+ + LL
Sbjct: 462 PIFYGENGEPIITPETT-EHVAKLFAEFGSKVWFEREAKDLL 502
>gi|423478034|ref|ZP_17454749.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
gi|402428196|gb|EJV60293.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
Length = 921
Score = 366 bits (940), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 228/641 (35%), Positives = 331/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA++Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPANLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEERRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + +Q G+ A
Sbjct: 753 LVTPILPHTADEVWPYIPGVTEESVQLTNMPEAVQLDGAEA 793
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|423401262|ref|ZP_17378435.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|401654252|gb|EJS71795.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
Length = 921
Score = 366 bits (939), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 228/641 (35%), Positives = 331/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVDDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA++Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPANLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEERRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + +Q G+ A
Sbjct: 753 LVTPILPHTADEVWPYIPGVTEESVQLTNMPEAVQLDGAEA 793
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVKVDDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|34763705|ref|ZP_00144628.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886533|gb|EAA23774.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 933
Score = 366 bits (939), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 212/624 (33%), Positives = 344/624 (55%), Gaps = 58/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH+S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++AL K+PV++ I ++G + +AG +GL
Sbjct: 313 GLVILGDHVTADAGTGAVHTAPGHGQEDYVVALNYKLPVISPIDHRGYLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + +L + +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIIEYLTKTGYILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLL--------NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
C L+ E+G + W S E+L+ N D+ + K +I+D+WFDSG S VL
Sbjct: 493 ICDLVRENGSNIWVEKSPEELIGEELLVKYNLKDLK--LRKETNIMDVWFDSGSSHRGVL 550
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +PA +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS
Sbjct: 551 EVWKGLRRPADLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKS 610
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN +S D+ + YG D+LR W + +D
Sbjct: 611 LGNTVSPADV-----------------------------IKVYGADILRLWCGSVDYRD- 640
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQ 934
V I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L +
Sbjct: 641 DVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLK 700
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 701 RNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEVL 760
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ L +
Sbjct: 761 MTLTKMVAPILSFTAEEIWESLSA 784
Score = 303 bits (776), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/381 (43%), Positives = 238/381 (62%), Gaps = 11/381 (2%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
NG+ FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+
Sbjct: 49 NGET-FILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQ 107
Query: 76 AI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
+ SK + +S L+IR+ + +A + + QK +F GVL DW+ N Y T D +
Sbjct: 108 VVKEVGVSKAREMSALEIRQLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEA 166
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
QL F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DHVS SIY++++ N+
Sbjct: 167 KQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHVSPSIYVRMQANKDLLD 225
Query: 192 LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQ 250
+ D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K
Sbjct: 226 KIGFNEDAYVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKDIGI 285
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
+ E++ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQ+D+++
Sbjct: 286 ENFELIKEFKGKDLEYTTYKHPF--LERTGLVILGDHVTADAGTGAVHTAPGHGQEDYVV 343
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPY 369
AL K+PV++ I ++G + +AG +GL K + +L + +L + HSYP+
Sbjct: 344 ALNYKLPVISPIDHRGYLTEEAGDLFKGLVYSEANKAIIEYLTKTGYILKMQEINHSYPH 403
Query: 370 DWRTKKPVILKASQQWFIDTE 390
DWR+K PVI +A++QWFI E
Sbjct: 404 DWRSKTPVIFRATEQWFIRME 424
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + +L + +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGYLTEEAGDLFKGLVYSEANKAIIEYLTKTGYILKMQEINHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY+ +T I ++ + C L+ E+G + W E+L+
Sbjct: 475 FYNDETNEEIFHKEILDRICDLVRENGSNIWVEKSPEELI 514
>gi|47570310|ref|ZP_00240957.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
gi|47553019|gb|EAL11423.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
Length = 921
Score = 366 bits (939), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 324/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVTKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL ++ N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHSGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVTKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|228987040|ref|ZP_04147165.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157474|ref|ZP_04285551.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228625924|gb|EEK82674.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228772634|gb|EEM21075.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 913
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 324/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL ++ N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHSGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 282 bits (722), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 414
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 339 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 397
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 398 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 457
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 458 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|319649644|ref|ZP_08003800.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
gi|317398806|gb|EFV79488.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
Length = 923
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 227/619 (36%), Positives = 331/619 (53%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ K+ L + D H +IWTTTPW++PAN I+ +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFKVKDGKNVLDQ---DTHIVIWTTTPWTIPANLGISIH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L YSV +VA+ L+ ++ F+ D VV G L+++ HP+ RD
Sbjct: 247 PDLTYSVVEANSKKFMVAEDLLASVAKEFEWEDYKVVQSVKGTDLENVVAEHPLYG--RD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF + + + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFHVGMKYGLDVLCPVDDKGNMTSEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 364 FYDAANKPITEKLEEAGALLKLTFITHSYPHDWRTKKPVIFRATAQWFASIKDFRNELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E N+ P + L + + R WCISRQRVWGVPIPVFY +G+ II +E I+H
Sbjct: 424 AVKETNWYPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEEIITDET-IEHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFREHGSNIWFEREAKELLPEGFTHPGSPNGQFTKETDIMDVWFDSGSSHQAVLLERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDGEGRKMSKSIGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WVA+ V +
Sbjct: 603 -----------VPA------------------KVMNQLGADILRLWVAS-VDYQADVRVS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG L + + +T S+S R VD +ML +L + +
Sbjct: 633 DAILKQVAEVYRKIRNTFRFLLGNLDDFNPATDSVSFENLREVDQFMLVKLNKLIKNVRE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +++A + NF +LSAFY KD LY ++ + R + L+ L +
Sbjct: 693 SYDRYEFASIYHAVNNFCTLDLSAFYLDFAKDVLYIEAKDNAERRAIQTVLYESLIALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
VAPI+ H ++EV+S +P+
Sbjct: 753 LVAPILSHTSDEVWSFIPN 771
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 170/396 (42%), Positives = 233/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG HIGHA+NKILKD +RS + G YVPGWD
Sbjct: 36 IYEKVQERTKGRPMFVLHDGPPYANGDIHIGHALNKILKDFIVRSKSMTGYNAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K +S + RK + +A E I++Q+ +F+ GV DWE N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMSIAEFRKLCEEYAYEQIDSQRGQFKRLGVRGDWE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYK-DKRSPSIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
K+ L + D H +IWTTTPW++PAN I+ +P L YSV +VA+ L+
Sbjct: 213 KVKDGKNVLDQ---DTHIVIWTTTPWTIPANLGISIHPDLTYSVVEANSKKFMVAEDLLA 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ F+ D +VV G L+++ HP+ RD ++ V++ GTG VH AP
Sbjct: 270 SVAKEFEWEDYKVVQSVKGTDLENVVAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF + + + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFHVGMKYGLDVLCPVDDKGNMTSEA-PGFEGLFYDAANKPITEKLEEAGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 387 FITHSYPHDWRTKKPVIFRATAQWFASIKDFRNELL 422
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 VDDKGNMTSEA-PGFEGLFYDAANKPITEKLEEAGALLKLTFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + E L ++ N+ P + L + + R WCISRQRVWGVPIPVFY
Sbjct: 406 ATAQWFASIKDFRNELLEAVKETNWYPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L EHG + W+ ++LL
Sbjct: 466 AENGEEIITDET-IEHVSNLFREHGSNIWFEREAKELL 502
>gi|423457920|ref|ZP_17434717.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|401148304|gb|EJQ55797.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
Length = 921
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 228/641 (35%), Positives = 330/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + +Q G+ A
Sbjct: 753 LVTPILPHTADEVWPYIPGVTEESVQLTNMPEAVQLDGAEA 793
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|229031527|ref|ZP_04187527.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
gi|228729816|gb|EEL80796.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
Length = 921
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 324/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNNEKYIIASELFETVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYVPG 771
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVKVNNEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|229174562|ref|ZP_04302092.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
gi|228608867|gb|EEK66159.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
Length = 921
Score = 365 bits (937), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 228/641 (35%), Positives = 330/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETQWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + +Q G+ A
Sbjct: 753 LVTPILPHTADEVWPYIPGVTEESVQLTNMPEAVQLDGAEA 793
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETQWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|423406680|ref|ZP_17383829.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-3]
gi|401659970|gb|EJS77453.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-3]
Length = 921
Score = 365 bits (937), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNNEKYIIASELFETVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNNEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|433545423|ref|ZP_20501777.1| isoleucyl-tRNA synthetase, partial [Brevibacillus agri BAB-2500]
gi|432183246|gb|ELK40793.1| isoleucyl-tRNA synthetase, partial [Brevibacillus agri BAB-2500]
Length = 837
Score = 365 bits (937), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 325/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EYK D S SIY+ ++ L T+ +IWTTTPW++PAN I+ +
Sbjct: 192 TALADAEIEYK-DKRSPSIYVSFRVVDGKGKL---DTETGVVIWTTTPWTIPANLAISLH 247
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P LEYSV G +VA L+E + W +++V+ F GQ L+ + HPI
Sbjct: 248 PELEYSVVKADGRKFLVANGLIEAASKEIGWE---NVEVLASFKGQELEGVVTKHPIY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R L+ V+ GTG VH AP HG+DDF + + VL + ++GK + +A PG
Sbjct: 303 DRPSPLILGEHVTLDAGTGCVHTAPGHGEDDFAVGQKYNLGVLCPVDHEGKMTSEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L N+ HSYP+DWRTKKPVI +A++QWF + + +
Sbjct: 362 EGLFYEDANKAVTEKLKENGALLKLNFFTHSYPHDWRTKKPVIYRATEQWFASIDGFREQ 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++ V ++P + L + IA R WCISRQRVWGVPIP+FY + I+N+ I
Sbjct: 422 MLEAIKNVKWIPHWGETRLANMIADRGDWCISRQRVWGVPIPIFYCKSCNEPIINDTTIN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-----NVTKSNDILDIWFDSGISWSHVLKD 765
H L + G W++ +L+ S + K DI+D+WFDSG S VL++
Sbjct: 482 HIAELFRKEGSAVWFAREANELIPQGLACSKCDCKDFRKETDIMDVWFDSGSSHQAVLRE 541
Query: 766 K----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+ PA +Y+EG DQ GWF SSL T VA+ TAP++ V HGF +D +G KMSKS+GN
Sbjct: 542 RGLAWPADMYLEGSDQYRGWFNSSLSTGVAVYGTAPYKAVLSHGFALDGEGRKMSKSLGN 601
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
V+ + + G D+LR WVA+ V
Sbjct: 602 VVVPQQV-----------------------------IDKLGADILRLWVAS-VDYQADVR 631
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I ILN + +KIR++ R+LLG L + ++ +D Y+L + +
Sbjct: 632 ISDAILNQIAEVYRKIRNTFRFLLGNLDGFDPAKDRVAYEQLGELDRYVLAKAAKVVKRS 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+Q+ + NF V +LSAFY + KDRLY ++ + R + +++ L
Sbjct: 692 RKAYDEYQFHTVFHAVHNFCVIDLSAFYLDICKDRLYVEAPDSVKRRAAQTVMYDCLLSL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPS 1018
++ VAPI+PH A+EV+S +P
Sbjct: 752 VKLVAPILPHTADEVWSFIPG 772
Score = 290 bits (741), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 225/386 (58%), Gaps = 13/386 (3%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G+P F+LHDGPPYANG HIGHA+NKILKD +R + G Y+PGWD HGLPIE
Sbjct: 46 GRPSFVLHDGPPYANGDIHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQAI 105
Query: 77 ITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+ ++ + + D RK+ + +A I+ Q+ +F+ GV DWE N Y T EY NQ
Sbjct: 106 VNAQGLDRRNIEVNDFRKRCEEYAWSYIDKQRDQFKRLGVRGDWE-NPYVTLLPEYEANQ 164
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
+ F + K+ YIY+ L+ VYWSPSS TALA++E+EYK D S SIY+ ++ L
Sbjct: 165 IRVFGEMAKKGYIYKGLRCVYWSPSSETALADAEIEYK-DKRSPSIYVSFRVVDGKGKL- 222
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL-KWTFQTD 252
T+ +IWTTTPW++PAN I+ +P LEYSV G +VA L+E+ K +
Sbjct: 223 --DTETGVVIWTTTPWTIPANLAISLHPELEYSVVKADGRKFLVANGLIEAASKEIGWEN 280
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
+EV+ F GQ L+ + HPI R L+ V+ GTG VH AP HG+DDF +
Sbjct: 281 VEVLASFKGQELEGVVTKHPIY--DRPSPLILGEHVTLDAGTGCVHTAPGHGEDDFAVGQ 338
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDW 371
+ VL + ++GK + +A PG EGL K L E L N + HSYP+DW
Sbjct: 339 KYNLGVLCPVDHEGKMTSEA-PGFEGLFYEDANKAVTEKLKENGALLKLNFFTHSYPHDW 397
Query: 372 RTKKPVILKASQQWFIDTERIKPEAL 397
RTKKPVI +A++QWF + + + L
Sbjct: 398 RTKKPVIYRATEQWFASIDGFREQML 423
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHS 1153
F V NL + ++GK + +A PG EGL K L E L N+ HS
Sbjct: 334 FAVGQKYNLGVLCPVDHEGKMTSEA-PGFEGLFYEDANKAVTEKLKENGALLKLNFFTHS 392
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YP+DWRTKKPVI +A++QWF + + + L ++ V ++P + L + IA R WCI
Sbjct: 393 YPHDWRTKKPVIYRATEQWFASIDGFREQMLEAIKNVKWIPHWGETRLANMIADRGDWCI 452
Query: 1214 SRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQRVWGVPIP+FY + I+N+ I H L + G W++ +L+
Sbjct: 453 SRQRVWGVPIPIFYCKSCNEPIINDTTINHIAELFRKEGSAVWFAREANELI 504
>gi|422339724|ref|ZP_16420681.1| isoleucine tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355370567|gb|EHG17947.1| isoleucine tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 933
Score = 365 bits (937), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 342/622 (54%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH+S SIY++++ N+ + D + LIWTTTPW+LPAN I N
Sbjct: 196 TALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLN 254
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
+Y + + N+I+AK L E+ K + +++ +F G+ L+ TY HP +R
Sbjct: 255 ENFDYGLYKTEKGNLILAKDLAESAFKDIGIENAELIKEFKGKDLEYTTYKHPF--LERT 312
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ L K+PV++ I ++G + +AG +GL
Sbjct: 313 GLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL 372
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L + HSYP+DWR+K PVI +A++QWFI E ++ +
Sbjct: 373 VYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKT 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L ++++NF+P K + + RP WCISRQRVWGVPIP+FY+ +T I ++ +
Sbjct: 433 LKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDR 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVLK- 764
C L+ EHG + W S E+L+ + + K +I+D+WFDSG S VL+
Sbjct: 493 ICGLVREHGSNIWVEKSPEELIGEELLEKYNLKGLKLRKETNIMDVWFDSGSSHRGVLEV 552
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P +Y+EG DQ GWF +SLLTSVA +P+++V HGFV D +G KMSKS+G
Sbjct: 553 WEGLHRPCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVNDGEGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N +S D+ + YG D+LR W + +D V
Sbjct: 613 NTVSPEDV-----------------------------IKVYGADILRLWCGSVDYRD-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + ++IR++ RY+LG ++ + T ++ +D + L +L + +
Sbjct: 643 RISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRS 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR + ++ +
Sbjct: 703 VTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEKKDSIARRAAQTVMYEVLMT 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + VAPI+ AEE++ +P+
Sbjct: 763 LTKMVAPILSFTAEEIWESIPA 784
Score = 306 bits (783), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 234/376 (62%), Gaps = 10/376 (2%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 77
FILHDGPPYANG HIGHA+NKILKDI ++ +G + YVPGWD HGLPIEL+ +
Sbjct: 53 FILHDGPPYANGNTHIGHALNKILKDIIVKYKTFRGFKSPYVPGWDTHGLPIELQVVKEV 112
Query: 78 -TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+K + +S L+IRK + +A + + QK +F GVL DW+ N Y T D + QL
Sbjct: 113 GVAKAREMSALEIRKLCEKYARKWVGIQKEQFIRLGVLGDWD-NPYLTLDPRFEAKQLEL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F +Y+ YI++ LKPVYWSP++ TALAE+E+EY DHVS SIY++++ N+ +
Sbjct: 172 FGEIYENGYIFKGLKPVYWSPATETALAEAEIEYY-DHVSPSIYVRMQANKDLLDKIGFN 230
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES-LKWTFQTDIEV 255
D + LIWTTTPW+LPAN I N +Y + + N+I+AK L ES K + E+
Sbjct: 231 EDAYVLIWTTTPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKDIGIENAEL 290
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++ L K
Sbjct: 291 IKEFKGKDLEYTTYKHPF--LERTGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYK 348
Query: 316 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTK 374
+PV++ I ++G + +AG +GL K + HL E +L + HSYP+DWR+K
Sbjct: 349 LPVISPIDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSK 408
Query: 375 KPVILKASQQWFIDTE 390
PVI +A++QWFI E
Sbjct: 409 TPVIFRATEQWFIRME 424
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I ++G + +AG +GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 355 IDHRGCLTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKTPVIFR 414
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFI E ++ + L ++ +NF+P K + + RP WCISRQRVWGVPIP+
Sbjct: 415 ATEQWFIRMEGGDLREKTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWGVPIPI 474
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFW 1254
FY+ +T I ++ + C L+ EHG + W
Sbjct: 475 FYNDETNEEIFHKEILDRICGLVREHGSNIW 505
>gi|399052166|ref|ZP_10741731.1| isoleucyl-tRNA synthetase [Brevibacillus sp. CF112]
gi|398050032|gb|EJL42422.1| isoleucyl-tRNA synthetase [Brevibacillus sp. CF112]
Length = 928
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 325/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EYK D S SIY+ ++ L T+ +IWTTTPW++PAN I+ +
Sbjct: 192 TALADAEIEYK-DKRSPSIYVSFQVVDGKGKL---DTETGVVIWTTTPWTIPANLAISLH 247
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P LEYSV G +VA L+E + W +++V+ F GQ L+ + HPI
Sbjct: 248 PELEYSVVKADGRKFLVANGLIEAASKEIGWE---NVEVLASFKGQELEGVVTKHPIY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R L+ V+ GTG VH AP HG+DDF + + VL + ++GK + +A PG
Sbjct: 303 DRPSPLILGEHVTLDAGTGCVHTAPGHGEDDFAVGQKYNLGVLCPVDHEGKMTSEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L N+ HSYP+DWRTKKPVI +A++QWF + + +
Sbjct: 362 EGLFYEDANKAVTEKLKENGALLKLNFFTHSYPHDWRTKKPVIYRATEQWFASIDGFREQ 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++ V ++P + L + IA R WCISRQRVWGVPIP+FY + I+N+ I
Sbjct: 422 MLEAIKNVKWIPHWGETRLANMIADRGDWCISRQRVWGVPIPIFYCKSCNEPIINDTTIN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDVNS-----NVTKSNDILDIWFDSGISWSHVLKD 765
H L + G W++ +L+ S + K DI+D+WFDSG S VL++
Sbjct: 482 HIAELFRKEGSAVWFAREANELIPQGLACSKCDCKDFRKETDIMDVWFDSGSSHQAVLRE 541
Query: 766 K----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+ PA +Y+EG DQ GWF SSL T VA+ TAP++ V HGF +D +G KMSKS+GN
Sbjct: 542 RGLAWPADMYLEGSDQYRGWFNSSLSTGVAVYGTAPYKAVLSHGFALDGEGRKMSKSLGN 601
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
V+ + + G D+LR WVA+ V
Sbjct: 602 VVVPQQV-----------------------------IDKLGADILRLWVAS-VDYQADVR 631
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I ILN + +KIR++ R+LLG L + ++ +D Y+L + +
Sbjct: 632 ISDAILNQIAEVYRKIRNTFRFLLGNLDGFDPAKDRVAYEQLGELDRYVLAKAAKVVKRS 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+Q+ + NF V +LSAFY + KDRLY ++ + R + +++ L
Sbjct: 692 RKAYDEYQFHTVFHAVHNFCVIDLSAFYLDICKDRLYVEAPDSVKRRAAQTVMYDCLLSL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPS 1018
++ VAPI+PH A+EV+S +P
Sbjct: 752 VKLVAPILPHTADEVWSFIPG 772
Score = 290 bits (741), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 164/387 (42%), Positives = 225/387 (58%), Gaps = 13/387 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
G+P F+LHDGPPYANG HIGHA+NKILKD +R + G Y+PGWD HGLPIE
Sbjct: 45 EGRPSFVLHDGPPYANGDIHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQA 104
Query: 76 AITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKN 132
+ ++ + + D RK+ + +A I+ Q+ +F+ GV DWE N Y T EY N
Sbjct: 105 IVNAQGLDRRNIEVNDFRKRCEEYAWSYIDKQRDQFKRLGVRGDWE-NPYVTLLPEYEAN 163
Query: 133 QLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL 192
Q+ F + K+ YIY+ L+ VYWSPSS TALA++E+EYK D S SIY+ ++ L
Sbjct: 164 QIRVFGEMAKKGYIYKGLRCVYWSPSSETALADAEIEYK-DKRSPSIYVSFQVVDGKGKL 222
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL-KWTFQT 251
T+ +IWTTTPW++PAN I+ +P LEYSV G +VA L+E+ K
Sbjct: 223 ---DTETGVVIWTTTPWTIPANLAISLHPELEYSVVKADGRKFLVANGLIEAASKEIGWE 279
Query: 252 DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 311
++EV+ F GQ L+ + HPI R L+ V+ GTG VH AP HG+DDF +
Sbjct: 280 NVEVLASFKGQELEGVVTKHPIY--DRPSPLILGEHVTLDAGTGCVHTAPGHGEDDFAVG 337
Query: 312 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYD 370
+ VL + ++GK + +A PG EGL K L E L N + HSYP+D
Sbjct: 338 QKYNLGVLCPVDHEGKMTSEA-PGFEGLFYEDANKAVTEKLKENGALLKLNFFTHSYPHD 396
Query: 371 WRTKKPVILKASQQWFIDTERIKPEAL 397
WRTKKPVI +A++QWF + + + L
Sbjct: 397 WRTKKPVIYRATEQWFASIDGFREQML 423
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHS 1153
F V NL + ++GK + +A PG EGL K L E L N+ HS
Sbjct: 334 FAVGQKYNLGVLCPVDHEGKMTSEA-PGFEGLFYEDANKAVTEKLKENGALLKLNFFTHS 392
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YP+DWRTKKPVI +A++QWF + + + L ++ V ++P + L + IA R WCI
Sbjct: 393 YPHDWRTKKPVIYRATEQWFASIDGFREQMLEAIKNVKWIPHWGETRLANMIADRGDWCI 452
Query: 1214 SRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQRVWGVPIP+FY + I+N+ I H L + G W++ +L+
Sbjct: 453 SRQRVWGVPIPIFYCKSCNEPIINDTTINHIAELFRKEGSAVWFAREANELI 504
>gi|414074888|ref|YP_007000105.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
UC509.9]
gi|413974808|gb|AFW92272.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 932
Score = 364 bits (935), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 337/643 (52%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SI++ K L E D+ +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYQ-DVRSASIFVAFKAKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAH 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV +V ++A + + E L+W + +V+ G L+ + HP
Sbjct: 247 PDYDYSVVAVNNRKFVIASEMLEAVAEKLEWE---NPEVLQTLKGSDLEYMVAKHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ A +V+ GTGLVH AP HG+DD+ + K+PVL+ I N+G Y+ D PGL
Sbjct: 302 DRETLIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGL 360
Query: 594 EGLNILGDGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ DG V + L E D L E + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 361 EGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQ 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
L +E+V++V K L + + R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 420 NILDEVEKVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPLPIFYGENGEPIITPETT- 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L G W+ + LL + + N TK DI+D+WFDSG SW+ VL
Sbjct: 479 EHVAKLFAAFGSKVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDSGSSWNGVLN 538
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SS+ TSVA+ AP++ V GFV+D KG KMSKS+
Sbjct: 539 ERDYLSFPADLYLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFVLDGKGRKMSKSI 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I D+T+ +G D+LR WVA+ +
Sbjct: 599 GNTIVPKDVTK-----------------------------KFGADILRLWVAS-IDTESD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + +IL+ + +KIR++LR+L+ + + I R VD YML + E
Sbjct: 629 VRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDGIDFAELRPVDKYMLVKFNELVK 688
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y + + + ++NF+ N+LS+FY KD +Y ++ N R S ++ I
Sbjct: 689 QIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYVILK 748
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L++ + PI+PH AEE +++L F+ + GS
Sbjct: 749 DLVKVLVPILPHTAEETWTYLEHEPENFAYLAEMPEAAEIPGS 791
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 239/396 (60%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY ++E GKP FILHDGPPYANG H+GH++NKI KDI +R + G R YVPGWD
Sbjct: 36 LYEKRQELNEGKPSFILHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K K + LD ++ + +A++ ++ Q+++F+S GVLADW+ Y T
Sbjct: 96 THGLPIEQQLAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDR-PYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S SI++ K
Sbjct: 155 LLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIEYQ-DVRSASIFVAFK 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
L E D+ +IWTTTPW++P+N I +P +YSV +V ++A ++E+
Sbjct: 214 AKDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPDYDYSVVAVNNRKFVIASEMLEA 270
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+ + + EV+ G L+ + HP R+ ++ A +V+ GTGLVH AP H
Sbjct: 271 VAEKLEWENPEVLQTLKGSDLEYMVAKHPFY--DRETLIMNADYVTLDSGTGLVHVAPGH 328
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWT-E 361
G+DD+ + K+PVL+ I N+G Y+ D PGLEG+ DG V + L E D L E
Sbjct: 329 GEDDYFASRKYKLPVLSPIDNRGYYT-DEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLE 386
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 387 FFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNIL 422
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLH-LVEPDVLWT-ENYQHSYPYDWRTKKP 1163
L+ I N+G Y+ D PGLEG+ +G V + L E D L E + HSYP+DWRTKKP
Sbjct: 344 LSPIDNRGYYT-DEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF + + L +E V++V K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDDFRQNILDEVEKVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPL 461
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ II E +H L G W+ + LL
Sbjct: 462 PIFYGENGEPIITPETT-EHVAKLFAAFGSKVWFEREAKDLL 502
>gi|226289429|gb|EEH44937.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
Length = 1002
Score = 364 bits (935), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 236/648 (36%), Positives = 336/648 (51%), Gaps = 63/648 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGAT-DLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH S + +K L +P+ L L G T ++ A+IWTTTPW+LPAN
Sbjct: 189 TALAEAELEYREDHKSIAALVKFPLTSIPSKLRDMLPGDTPEISAVIWTTTPWTLPANAA 248
Query: 474 IAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFP--GQYLQDITYIH 528
IA +P LEYSV VK N +++ +E L+ Q V P G L
Sbjct: 249 IAVSPTLEYSV--VKSENHGYLLIGSLRLEYLQTLLQEGEIAVVGSPLLGYELGSHATYR 306
Query: 529 PINKEQR-DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
P+ K++ ++ A FV++ G+GLVHCAP HG +D+ + LA I + ++G ++
Sbjct: 307 PLFKDESVSQPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLAHGITAHAPVNDEGLFTD 366
Query: 588 DAGPG----LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQ 641
+A P L G +LG+G VL VE +L Y+H YPYDWRTK PVI++A++Q
Sbjct: 367 EAIPSNPSLLSGKPVLGEGYKDVLKYVENKGQLLAKHIYEHKYPYDWRTKLPVIVRATEQ 426
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
WF D I+ +AL L++V F+P + + L + R WCISRQR WGVPIP Y +T
Sbjct: 427 WFADVGDIRHDALRALKDVQFIPATGRSRLESFVKNRSEWCISRQRAWGVPIPALYHRET 486
Query: 702 --IIVNEANIKHFCTLIDEHGPDFWWSLS------VEQLLNTSDVNSNVTKSNDILDIWF 753
I+ E ++ H +IDE G D WW+ + L S + + D +D+WF
Sbjct: 487 GEAILTEKSVSHIMKVIDERGIDSWWTDDENDPAWIPSSLRGSS-GAGYKRGTDTMDVWF 545
Query: 754 DSGISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT---------APFR 799
DSG SW+ V + A VY+EG DQ GWF SSLLT +A APF+
Sbjct: 546 DSGSSWTQVKTPASAEGYAADVYLEGTDQHRGWFQSSLLTYIAQNIALGKPSSLLRAPFK 605
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+ HGF +D+ KMSKS+GNVI + I G P K + QG K+ P
Sbjct: 606 TLITHGFTLDKNSRKMSKSIGNVIHPNQIIDGTLLPPLKLKKI----------QGRKEKP 655
Query: 860 ------AYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS 912
A G D LR WVA+ +KD + IG+ +L + + K R + R LLG L +
Sbjct: 656 KGPIYDALGPDSLRLWVASSDYTKD--IIIGEPVLKAVNTSLHKYRMTFRLLLGSLQDFD 713
Query: 913 ESTG---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLV 969
+ +D L +L N Y F++ +A + + E SAFY +
Sbjct: 714 PKSAIPYESLHIIDKIALLQLRNLVNKCQDAYLNFEFYKAVTAINKWANLEFSAFYIESL 773
Query: 970 KDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
KDRLY DS+N +R + TL +I++ + P++P L EE + H P
Sbjct: 774 KDRLYADSVNSLSRRAAQTTLCHIYYHFQGILGPVVPLLVEESWEHTP 821
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/426 (42%), Positives = 245/426 (57%), Gaps = 37/426 (8%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQR + F+LHDGPPYANG H+GHA+NKILKDI R L GKR+ YV GW
Sbjct: 17 DLYTWQRRQRPIENRFVLHDGPPYANGDLHVGHALNKILKDIVCRVQLAAGKRIDYVSGW 76
Query: 66 DCHGLPIELKAIT------------------SKDKLLSPLDIRKKAKNFALETINTQKAE 107
DCHGLPIELKA+ + + L IR A+ A +T+ Q
Sbjct: 77 DCHGLPIELKALELQAQRDAGKVQSSGNEKGNANGNLGAATIRNAARQLAEKTVVEQMKG 136
Query: 108 FESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESE 167
F W V+ADW +N + T DK + K QL F + ++ I R KPVYWSPSSRTALAE+E
Sbjct: 137 FRQWAVMADW-NNSWKTMDKNFEKQQLDVFLKMVEKGLINRRFKPVYWSPSSRTALAEAE 195
Query: 168 LEYKPDHVSKSIYLKIKLNQVPAHL---LEGAT-DLHALIWTTTPWSLPANQFIAFNPAL 223
LEY+ DH S + +K L +P+ L L G T ++ A+IWTTTPW+LPAN IA +P L
Sbjct: 196 LEYREDHKSIAALVKFPLTSIPSKLRDMLPGDTPEISAVIWTTTPWTLPANAAIAVSPTL 255
Query: 224 EYSVASVKGAN---VIVAKCLVESLKWTFQTDIEVVCDFP--GQYLQDITYIHPINKEQR 278
EYSV VK N +++ +E L+ Q V P G L P+ K++
Sbjct: 256 EYSV--VKSENHGYLLIGSLRLEYLQTLLQEGEIAVVGSPLLGYELGSHATYRPLFKDES 313
Query: 279 -DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-- 335
++ A FV++ G+GLVHCAP HG +D+ + LA I + ++G ++ +A P
Sbjct: 314 VSQPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLAHGITAHAPVNDEGLFTDEAIPSNP 373
Query: 336 --LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
L G +LG+G VL VE +L Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 374 SLLSGKPVLGEGYKDVLKYVENKGQLLAKHIYEHKYPYDWRTKLPVIVRATEQWFADVGD 433
Query: 392 IKPEAL 397
I+ +AL
Sbjct: 434 IRHDAL 439
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKK 1162
+ ++G ++ +A P L G +LGEG VL VE +L Y+H YPYDWRTK
Sbjct: 358 VNDEGLFTDEAIPSNPSLLSGKPVLGEGYKDVLKYVENKGQLLAKHIYEHKYPYDWRTKL 417
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ +AL L+ V F+P + + L + R WCISRQR WGVP
Sbjct: 418 PVIVRATEQWFADVGDIRHDALRALKDVQFIPATGRSRLESFVKNRSEWCISRQRAWGVP 477
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y +T I+ E ++ H +IDE G D WW+
Sbjct: 478 IPALYHRETGEAILTEKSVSHIMKVIDERGIDSWWT 513
>gi|30263897|ref|NP_846274.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47529327|ref|YP_020676.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49186745|ref|YP_029997.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|65321224|ref|ZP_00394183.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|165872280|ref|ZP_02216917.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167641124|ref|ZP_02399379.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170708818|ref|ZP_02899254.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177654920|ref|ZP_02936637.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190565901|ref|ZP_03018820.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|227813195|ref|YP_002813204.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|229604270|ref|YP_002868131.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0248]
gi|254735935|ref|ZP_05193641.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254751007|ref|ZP_05203046.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|254757935|ref|ZP_05209962.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|421507437|ref|ZP_15954357.1| isoleucyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|81583658|sp|Q81WE4.1|SYI1_BACAN RecName: Full=Isoleucine--tRNA ligase 1; AltName: Full=Isoleucyl-tRNA
synthetase 1; Short=IleRS 1
gi|254782360|sp|C3P665.1|SYI_BACAA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|254782361|sp|C3L730.1|SYI_BACAC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|30258541|gb|AAP27760.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47504475|gb|AAT33151.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49180672|gb|AAT56048.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|164711956|gb|EDR17496.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167510904|gb|EDR86295.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170126303|gb|EDS95194.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|172080431|gb|EDT65518.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190562820|gb|EDV16786.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|227002605|gb|ACP12348.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
gi|229268678|gb|ACQ50315.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
gi|401822571|gb|EJT21721.1| isoleucyl-tRNA ligase [Bacillus anthracis str. UR-1]
Length = 921
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFSVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYETVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 SVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|386737718|ref|YP_006210899.1| Isoleucyl-tRNA synthetase 1 [Bacillus anthracis str. H9401]
gi|384387570|gb|AFH85231.1| Isoleucyl-tRNA synthetase 1 [Bacillus anthracis str. H9401]
Length = 913
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFSVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYETVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 205 SVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 414
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 339 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 397
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 398 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 457
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 458 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|317059145|ref|ZP_07923630.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|313684821|gb|EFS21656.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
Length = 931
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 210/622 (33%), Positives = 332/622 (53%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY+++K N + + + +IWTTTPW+LPAN I+ N
Sbjct: 193 TALAEAEIEYH-DHTSPSIYVRMKANSDLLEKISLTEEAYVVIWTTTPWTLPANVAISLN 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P +Y V + N+I+ K L E + ++V +F G L+ +Y HP R
Sbjct: 252 PDFDYGVYKTEKGNLILGKDLAETAFAEMGIENPELVKEFKGSTLEMTSYQHPFL--DRT 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++ +P+++ I +G + +AGP GL
Sbjct: 310 GYIILGTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGL 369
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L + HSYP+DWR+K PVI +A++QWF+ E ++ +A
Sbjct: 370 FYEKANKAIIDHLTETGFLLKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLREKA 429
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L L++V F+P + + + RP WCISRQRVWGVPIPVFY+ +T I N+ + H
Sbjct: 430 LRALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFYNEETGEEIFNQDILNH 489
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVLKD 765
+ +++ G D W + E+L+ ++ ++ K +I+D+WFDSG S VL+
Sbjct: 490 VISFVEKEGSDAWLLHTSEELIGEENLKKYHLEGISLRKETNIMDVWFDSGSSHRAVLET 549
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
PA +Y+EG DQ GWF +SLLTSV + APF+ + HGFV D KG KMSKS G
Sbjct: 550 WEGLRWPADLYLEGSDQHRGWFQTSLLTSVGSRGVAPFKKILTHGFVNDGKGEKMSKSKG 609
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV++ I + YG D+LR W A+ ++ V
Sbjct: 610 NVVAPEKI-----------------------------IKQYGADILRLWCASVDYRE-DV 639
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + +++R++ RY+LG + ++ +D + L +L + +
Sbjct: 640 KISDNIVKQMAETYRRVRNTARYILGNSYGFDPKKDAVPYQDLLEIDKWALHKLEMLKKS 699
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR S + I
Sbjct: 700 VGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIKDRLYTEKEDSIARRSAQTVMIEILMT 759
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L++ +API+ AEE++ HLP
Sbjct: 760 LVKMIAPILSFTAEEIWEHLPE 781
Score = 303 bits (776), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 232/386 (60%), Gaps = 9/386 (2%)
Query: 10 WQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+++ GK FILHDGPPYANG HIGHA+NKILKDI ++ LQG + Y+PGWD HG
Sbjct: 40 YEKGLAKGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHG 99
Query: 70 LPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFD 126
LPIELK + SK K ++ L+IR+ K +AL+ ++ Q+ EF GV+ WE + Y T
Sbjct: 100 LPIELKVMEKLGSKAKDMTALEIRQLCKEYALKWVDIQREEFIRMGVIGKWE-DPYLTLK 158
Query: 127 KEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN 186
++ QL F LY YI++ LKP+YWSP + TALAE+E+EY DH S SIY+++K N
Sbjct: 159 PQFEAKQLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEIEYH-DHTSPSIYVRMKAN 217
Query: 187 QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
+ + + +IWTTTPW+LPAN I+ NP +Y V + N+I+ K L E+
Sbjct: 218 SDLLEKISLTEEAYVVIWTTTPWTLPANVAISLNPDFDYGVYKTEKGNLILGKDLAETAF 277
Query: 247 WTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
+ E+V +F G L+ +Y HP R ++ V++ GTG VH AP HGQ
Sbjct: 278 AEMGIENPELVKEFKGSTLEMTSYQHPFL--DRTGYIILGTHVTADAGTGCVHTAPGHGQ 335
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQ 364
+D+++ +P+++ I +G + +AGP GL K + HL E +L +
Sbjct: 336 EDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGLFYEKANKAIIDHLTETGFLLKMKEIT 395
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTE 390
HSYP+DWR+K PVI +A++QWF+ E
Sbjct: 396 HSYPHDWRSKTPVIFRATEQWFVKAE 421
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 5/165 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I +G + +AGP GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 352 INYKGYLTEEAGPLFAGLFYEKANKAIIDHLTETGFLLKMKEITHSYPHDWRSKTPVIFR 411
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF+ E ++ +AL L+ V F+P + + + RP WCISRQRVWGVPIPV
Sbjct: 412 ATEQWFVKAEGSDLREKALRALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPV 471
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
FY+ +T I N+ + H + +++ G D W E+L+ ++
Sbjct: 472 FYNEETGEEIFNQDILNHVISFVEKEGSDAWLLHTSEELIGEENL 516
>gi|52141594|ref|YP_085236.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
gi|81824207|sp|Q636D1.1|SYI1_BACCZ RecName: Full=Isoleucine--tRNA ligase 1; AltName: Full=Isoleucyl-tRNA
synthetase 1; Short=IleRS 1
gi|51975063|gb|AAU16613.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus cereus
E33L]
Length = 921
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHQGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|423558542|ref|ZP_17534844.1| isoleucyl-tRNA synthetase [Bacillus cereus MC67]
gi|401191810|gb|EJQ98832.1| isoleucyl-tRNA synthetase [Bacillus cereus MC67]
Length = 921
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 227/641 (35%), Positives = 333/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ +V I+A L E ++ T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVNVNDEKYIIASELFETVEKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I +
Sbjct: 424 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISNVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + S +++ R VD YML +L E +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVAAAELREVDRYMLVKLNELITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N + R + L+++ L +
Sbjct: 693 AYEAYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + + ++ G+ A
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEVVEVDGAEA 793
Score = 282 bits (722), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 232/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ +V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVNVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVEKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L +E +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I + L EHG + W+ + LL
Sbjct: 475 DE-TISNVADLFREHGSNVWFEREAKDLL 502
>gi|229168636|ref|ZP_04296358.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
gi|423592108|ref|ZP_17568139.1| isoleucyl-tRNA synthetase [Bacillus cereus VD048]
gi|228614792|gb|EEK71895.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
gi|401232241|gb|EJR38743.1| isoleucyl-tRNA synthetase [Bacillus cereus VD048]
Length = 921
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 228/643 (35%), Positives = 331/643 (51%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L N + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDNFNPSENTVAVAELREVDRYMLVKLNDLITKVKD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + + R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
V PI+PH A+EV+ ++P + + + GS A R
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEATEVEGSEALR 795
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|167636430|ref|ZP_02394729.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170688822|ref|ZP_02880025.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|254683395|ref|ZP_05147255.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254739817|ref|ZP_05197510.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
gi|421639651|ref|ZP_16080242.1| isoleucyl-tRNA ligase [Bacillus anthracis str. BF1]
gi|167528172|gb|EDR90959.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170667177|gb|EDT17937.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|403393316|gb|EJY90561.1| isoleucyl-tRNA ligase [Bacillus anthracis str. BF1]
Length = 921
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFSVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYETVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 SVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|254721429|ref|ZP_05183218.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
Length = 921
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFSVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYETVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 SVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|443692507|gb|ELT94100.1| hypothetical protein CAPTEDRAFT_214074 [Capitella teleta]
Length = 571
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 270/447 (60%), Gaps = 22/447 (4%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
G ELY WQR + K F+LHDGPPYANG PH+GH +NK+LKDIT++ +L G +VHY+
Sbjct: 5 GLDELYEWQRNEIRSK-NFVLHDGPPYANGKPHVGHVLNKVLKDITVKYKILTGHKVHYI 63
Query: 63 PGWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
PGWDCHG+PIE KA+ + L+PLDIR A+ FA + I QK F+SW + DW+
Sbjct: 64 PGWDCHGVPIEQKALADLRVDNTKLTPLDIRNTARKFATKVIKDQKTAFQSWAITGDWK- 122
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
Y TFD Y QL F+ +YK+ IY+D PV+W TALAE+ELEY HVS S+
Sbjct: 123 KPYVTFDGHYEAKQLKVFFEMYKKGMIYQDFMPVHW-----TALAEAELEYNEKHVSTSL 177
Query: 180 YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGANV 235
Y+K L ++P L L + ALIWTTTPW+LP+NQ I + ++Y V + K
Sbjct: 178 YVKFPLQRLPDALWNALGKDDEPFALIWTTTPWTLPSNQAICYGEGIKYCFVHNPKTMEA 237
Query: 236 -IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGT 294
+++ E LK + D+ ++C G L Y HP+ + KLLPA V+ +KGT
Sbjct: 238 YLISVDFFEQLKSLLRVDLTILCTMDGSELSGTVYRHPLLSKSVQ-KLLPARHVTVAKGT 296
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
GLVH APAHG +DF +A+ IP+ L+ +GK++ DAG L G +L +G V+ L+
Sbjct: 297 GLVHTAPAHGTEDFQVAVNHDIPIKCLVDEEGKFTADAGSSLAGKFVLDEGSQTVMSLMH 356
Query: 355 PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHD 414
+L E + HSYPYDWRTK+PVIL+AS+QWF++T + A+V N + +V + D
Sbjct: 357 EQILHREEFTHSYPYDWRTKQPVILRASKQWFVNTSDNQEAAIVRLDDCNFIIKVCVVQD 416
Query: 415 RPGTALAESELEYKPDHISKSIYLKIK 441
A E++ P + + S+ +K
Sbjct: 417 ------ALKEVDVLPSYYANSMQTMLK 437
Score = 320 bits (819), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/414 (41%), Positives = 248/414 (59%), Gaps = 33/414 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY H+S S+Y+K L ++P L L + ALIWTTTPW+LP+NQ I
Sbjct: 159 TALAEAELEYNEKHVSTSLYVKFPLQRLPDALWNALGKDDEPFALIWTTTPWTLPSNQAI 218
Query: 475 AFNPALEYS-VASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+ ++Y V + K +++ E LK + D+ ++C G L Y HP+
Sbjct: 219 CYGEGIKYCFVHNPKTMEAYLISVDFFEQLKSLLRVDLTILCTMDGSELSGTVYRHPLLS 278
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ KLLPA V+ +KGTGLVH APAHG +DF +A+ IP+ L+ +GK++ DAG
Sbjct: 279 KSVQ-KLLPARHVTVAKGTGLVHTAPAHGTEDFQVAVNHDIPIKCLVDEEGKFTADAGSS 337
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
L G +L +G V+ L+ +L E + HSYPYDWRTK+PVIL+AS+QWF++T +
Sbjct: 338 LAGKFVLDEGSQTVMSLMHEQILHREEFTHSYPYDWRTKQPVILRASKQWFVNTSDNQEA 397
Query: 653 ALACLEEVNFV----------------PESAKKTLRDQIAQRPYWCISRQRVWGVPIPVF 696
A+ L++ NF+ P +++ + R YWCISRQR WGVPIP F
Sbjct: 398 AIVRLDDCNFIIKVCVVQDALKEVDVLPSYYANSMQTMLKSRSYWCISRQRSWGVPIPFF 457
Query: 697 YDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNT-------SDVNSNVTKSND 747
Y+ +T ++ EA I+H +L+++HG + WWS S +LL D ++ TK D
Sbjct: 458 YNAETGKPLLAEAWIQHISSLVEQHGSNCWWSKSDAELLPKHIIEQCGGDPSAAYTKETD 517
Query: 748 ILDIWFDSGISWSHVLK--DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFR 799
+LDIWFDSG SW+ VL+ D A VY+EG+DQ+ GWF SSL+TS+ + AP++
Sbjct: 518 VLDIWFDSGASWASVLQDCDGVADVYLEGLDQLGGWFQSSLITSLVCRGHAPYK 571
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 103/174 (59%), Gaps = 18/174 (10%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILK 1167
L+ +GK++ DAG L G +L EG V+ L+ +L E + HSYPYDWRTK+PVIL+
Sbjct: 323 LVDEEGKFTADAGSSLAGKFVLDEGSQTVMSLMHEQILHREEFTHSYPYDWRTKQPVILR 382
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFV----------------PESAKKSLRDQIAQRPYW 1211
AS+QWF++T + A+ L+ NF+ P S++ + R YW
Sbjct: 383 ASKQWFVNTSDNQEAAIVRLDDCNFIIKVCVVQDALKEVDVLPSYYANSMQTMLKSRSYW 442
Query: 1212 CISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
CISRQR WGVPIP FY+ +T ++ EA I+H +L+++HG + WWS +LL
Sbjct: 443 CISRQRSWGVPIPFFYNAETGKPLLAEAWIQHISSLVEQHGSNCWWSKSDAELL 496
>gi|423574498|ref|ZP_17550617.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus MSX-D12]
gi|401212023|gb|EJR18769.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus MSX-D12]
Length = 921
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 227/619 (36%), Positives = 326/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNH--SESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + SE+T +I+ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|229092941|ref|ZP_04224074.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228690445|gb|EEL44229.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
Length = 913
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHQGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 414
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 339 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 397
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 398 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 457
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 458 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|404329201|ref|ZP_10969649.1| isoleucyl-tRNA ligase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 927
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 221/624 (35%), Positives = 320/624 (51%), Gaps = 66/624 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQF 473
+ALAE+E+EYK D S SI+ V H+ +G D +IWTTTPW++PAN
Sbjct: 191 SALAEAEIEYK-DVKSYSIF-------VSFHVTDGKGVLNNDEEVVIWTTTPWTMPANLA 242
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
I NP +YSV G +VA LV+ L T + + F G+ L+ + HP
Sbjct: 243 ICVNPKFDYSVVETGGRKFVVATELVDKLTKTLNWENPKTLRTFNGKALEGVVCRHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RD ++ V+ GTG VH AP G+DDF + + +L + ++GK + D PG
Sbjct: 302 -NRDSLMILGDHVTLDAGTGCVHTAPGFGEDDFNVGKKYGLDILCPVDDKGKMT-DEAPG 359
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ D + V+ +E +L + HSYP+DWRTKKPVI +A++QWF + +
Sbjct: 360 FEGM-FYSDANEPVIQKLEEVHALLKKGTFTHSYPHDWRTKKPVIWRATKQWFASIKAFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
PE L + EV ++P + + I R WCISRQR WGVPIPVFY DG+ I+ +E
Sbjct: 419 PEILKAIHEVKWIPSWGDVRMTNMIKDREDWCISRQRAWGVPIPVFYGEDGEPIVTDE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I H L ++G + W+ + LL + N K DI+D+WFDSG + VL
Sbjct: 478 IHHVAELFRKYGSNIWFQREAKDLLPEGFTSKHSPNGKFRKETDIMDVWFDSGTTHQGVL 537
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+P A +Y+EG DQ GWF SSL T VA+ AP+R V HGF +D KG KMSKS
Sbjct: 538 TTRPGLRRPADMYLEGSDQYRGWFNSSLATCVAVTGHAPYRQVLSHGFTLDGKGLKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
VGNVI K + +G D++R WVA+
Sbjct: 598 VGNVIDP-----------------------------MKVMKQFGADIIRLWVAS-VDYQA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
+ +IL + +KIR+++R++LG LH+ +E ++ +D YML RL E
Sbjct: 628 DARVSNDILAQVAEVYRKIRNTVRFMLGNLHDFNEKDNAVPVEKLPELDKYMLLRLNELI 687
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
T Y E+Q+ + L N+ +LSAFY +VKD LY + R S L
Sbjct: 688 KTCRDGYEEYQFQTVYKALQNYCTTDLSAFYMDIVKDALYVQPKDSLVRRSAQTVLFRTV 747
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPS 1018
+ + ++P++PH AEE++ ++P
Sbjct: 748 VAMTKLLSPVIPHTAEEIWQYIPG 771
Score = 287 bits (734), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 228/400 (57%), Gaps = 22/400 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY + GKP+FILHDGPPYANG HIGHA NK+LKD+ R + G + YVPGWD
Sbjct: 36 LYEQSVKRNEGKPQFILHDGPPYANGNIHIGHAENKVLKDMINRYKSMTGFQTPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K +S D+R+K K +AL + QK +F+ GV DW+H Y T
Sbjct: 96 THGLPIEQQLAKQGIDRKKMSIADLREKCKEYALGQVARQKVQFKRLGVRGDWDHP-YLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+KE+ Q+ F + ++ YIY+D K VYWSPSS +ALAE+E+EYK D S SI+
Sbjct: 155 LNKEFEAEQIEVFGTMARKGYIYKDKKTVYWSPSSESALAEAEIEYK-DVKSYSIF---- 209
Query: 185 LNQVPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
V H+ +G D +IWTTTPW++PAN I NP +YSV G +VA
Sbjct: 210 ---VSFHVTDGKGVLNNDEEVVIWTTTPWTMPANLAICVNPKFDYSVVETGGRKFVVATE 266
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
LV+ L T + + + F G+ L+ + HP RD ++ V+ GTG VH
Sbjct: 267 LVDKLTKTLNWENPKTLRTFNGKALEGVVCRHPFY--NRDSLMILGDHVTLDAGTGCVHT 324
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP G+DDF + + +L + ++GK + D PG EG+ D + V+ +E +
Sbjct: 325 APGFGEDDFNVGKKYGLDILCPVDDKGKMT-DEAPGFEGM-FYSDANEPVIQKLEEVHAL 382
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + HSYP+DWRTKKPVI +A++QWF + +PE L
Sbjct: 383 LKKGTFTHSYPHDWRTKKPVIWRATKQWFASIKAFRPEIL 422
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ ++GK + D PG EG+ + + V+ +E +L + HSYP+DWRTKKPVI
Sbjct: 347 VDDKGKMT-DEAPGFEGM-FYSDANEPVIQKLEEVHALLKKGTFTHSYPHDWRTKKPVIW 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + +PE L + V ++P + + I R WCISRQR WGVPIPVF
Sbjct: 405 RATKQWFASIKAFRPEILKAIHEVKWIPSWGDVRMTNMIKDREDWCISRQRAWGVPIPVF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y DG+ I+ +E I H L ++G + W+ + LL
Sbjct: 465 YGEDGEPIVTDE-TIHHVAELFRKYGSNIWFQREAKDLL 502
>gi|229019098|ref|ZP_04175933.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
gi|229025342|ref|ZP_04181760.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
gi|423418196|ref|ZP_17395285.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|228735927|gb|EEL86504.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228742198|gb|EEL92363.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
gi|401106469|gb|EJQ14430.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
Length = 921
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 333/643 (51%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L N SE+T +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + + R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
V PI+PH A+EV+ ++P + + + GS A R
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEATEVEGSEALR 795
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|42782988|ref|NP_980235.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|81409428|sp|Q732H4.1|SYI1_BACC1 RecName: Full=Isoleucine--tRNA ligase 1; AltName: Full=Isoleucyl-tRNA
synthetase 1; Short=IleRS 1
gi|42738915|gb|AAS42843.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
Length = 921
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|398813826|ref|ZP_10572517.1| isoleucyl-tRNA synthetase [Brevibacillus sp. BC25]
gi|398037879|gb|EJL31056.1| isoleucyl-tRNA synthetase [Brevibacillus sp. BC25]
Length = 925
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 329/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EYK D S SIY+ ++ L T+ +IWTTTPW+LPAN I+ +
Sbjct: 192 TALADAEIEYK-DKRSPSIYVSFQVADGKGKL---DTETGVVIWTTTPWTLPANLAISLH 247
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P LEY+V V G +VA L+E + W ++++ F GQ L+ + HP
Sbjct: 248 PELEYNVVKVDGRKFLVANGLIEAASKEIGWE---GVEILATFKGQDLEGVETQHPFY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R L+ V+ GTG VH AP HG+DDF + + VL + ++GK + +A PG
Sbjct: 303 DRKSPLILGEHVTLDAGTGCVHTAPGHGEDDFNVGQKYNLGVLCPVDHEGKMTNEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L ++ HSYP+DWRTKKPVI +A++QWF + + +
Sbjct: 362 EGLFYEDANKVITEKLKENGALLKLSFFTHSYPHDWRTKKPVIYRATEQWFASIDGFRAQ 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++ V ++P + L + IA R WCISRQRVWGVPIP+FY + I+N+ I
Sbjct: 422 MLEAIKNVKWIPHWGETRLANMIADRGDWCISRQRVWGVPIPIFYCKSCNEPIINDTTIN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQL----LNTSDVNSN-VTKSNDILDIWFDSGISWSHVLKD 765
H L + G W+S +L L+ + + N K DI+D+WFDSG S VL++
Sbjct: 482 HVADLFRKEGSKVWFSREANELVPEGLSCTKCDCNDFRKETDIMDVWFDSGSSHQAVLRE 541
Query: 766 K----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+ PA +Y+EG DQ GWF SSL T VA+ TAP+++V HGF +D +G KMSKS+GN
Sbjct: 542 RGIAWPADMYLEGSDQYRGWFNSSLSTGVAVYGTAPYKSVLSHGFALDGEGRKMSKSLGN 601
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+LR WVA+ V
Sbjct: 602 VIVPQQV-----------------------------IDKMGADILRLWVAS-VDYQADVR 631
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I ILN + +KIR++ R+LLG L + +T ++ +D Y+L + +
Sbjct: 632 ISDAILNQIAEVYRKIRNTFRFLLGNLDGFNPATDRVAYEELGELDRYVLAKAAKVAKRT 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+Q+ + NF V +LSAFY + KDRLY ++ + R + +++ L
Sbjct: 692 RKAYDEYQFHTVFHAVHNFCVIDLSAFYLDICKDRLYVEAPDSLKRRAAQTVMYDCLLSL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPS 1018
++ VAP++PH A+EV++ +P
Sbjct: 752 VKLVAPLLPHTADEVWAFIPG 772
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 223/385 (57%), Gaps = 13/385 (3%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI 77
+P F+LHDGPPYANG HIGHA+NKILKD +R + G Y+PGWD HGLPIE I
Sbjct: 47 RPSFVLHDGPPYANGDIHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQAII 106
Query: 78 TSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQL 134
++ + + D R++ + +A I+ Q+ +F+ GV DWE N Y T EY NQ+
Sbjct: 107 NAQGLDRRSIEVNDFRQRCEEYAWSYIDKQRDQFKRLGVRGDWE-NPYVTLLPEYEANQI 165
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
F + K+ YIY+ L+ VYWSPSS TALA++E+EYK D S SIY+ ++ L
Sbjct: 166 RVFGEMAKKGYIYKGLRCVYWSPSSETALADAEIEYK-DKRSPSIYVSFQVADGKGKL-- 222
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL-KWTFQTDI 253
T+ +IWTTTPW+LPAN I+ +P LEY+V V G +VA L+E+ K +
Sbjct: 223 -DTETGVVIWTTTPWTLPANLAISLHPELEYNVVKVDGRKFLVANGLIEAASKEIGWEGV 281
Query: 254 EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 313
E++ F GQ L+ + HP R L+ V+ GTG VH AP HG+DDF +
Sbjct: 282 EILATFKGQDLEGVETQHPFY--DRKSPLILGEHVTLDAGTGCVHTAPGHGEDDFNVGQK 339
Query: 314 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWR 372
+ VL + ++GK + +A PG EGL K L E L + + HSYP+DWR
Sbjct: 340 YNLGVLCPVDHEGKMTNEA-PGFEGLFYEDANKVITEKLKENGALLKLSFFTHSYPHDWR 398
Query: 373 TKKPVILKASQQWFIDTERIKPEAL 397
TKKPVI +A++QWF + + + L
Sbjct: 399 TKKPVIYRATEQWFASIDGFRAQML 423
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHS 1153
F V NL + ++GK + +A PG EGL K L E L ++ HS
Sbjct: 334 FNVGQKYNLGVLCPVDHEGKMTNEA-PGFEGLFYEDANKVITEKLKENGALLKLSFFTHS 392
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YP+DWRTKKPVI +A++QWF + + + L ++ V ++P + L + IA R WCI
Sbjct: 393 YPHDWRTKKPVIYRATEQWFASIDGFRAQMLEAIKNVKWIPHWGETRLANMIADRGDWCI 452
Query: 1214 SRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQRVWGVPIP+FY + I+N+ I H L + G W+S +L+
Sbjct: 453 SRQRVWGVPIPIFYCKSCNEPIINDTTINHVADLFRKEGSKVWFSREANELV 504
>gi|347727138|gb|AEP19927.1| isoleucyl-tRNA synthetase [Bacillus aquimaris]
Length = 923
Score = 363 bits (933), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 227/625 (36%), Positives = 330/625 (52%), Gaps = 62/625 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L EG +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYQ-DKRSPSIYVGFDITDGKGVLAEGT---QMIIWTTTPWTIPANLGIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
L Y V S K +VA+ L+E NL+W D V G+ L+ + HP+ +
Sbjct: 247 KDLSYVVVSEKEKQYVVAEDLLEEVAKNLEWE---DYSVSKKVKGEELEHLVAKHPLY-D 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
++ L +L V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG
Sbjct: 303 RKSLVIL-GDHVTTDSGTGCVHTAPGHGEDDFLVGKKYGLDVLCPVDDKGVMTAEA-PGF 360
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L + HSYP+DWRTKKPVI +A+ QWF ++ + E
Sbjct: 361 EGLFYDKANKPITEKLQEVGALLKLTFITHSYPHDWRTKKPVIFRATAQWFASIDKFRKE 420
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L + E ++P + L + + R WCISRQR WGVPIPVFY +G+ II +E I+
Sbjct: 421 LLEAVNETKWIPSWGETRLFNMVRDRGDWCISRQRAWGVPIPVFYAENGEEIITDET-IE 479
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ + LL + S N + TK DI+D+WFDSG S VL++
Sbjct: 480 HVSNLFREHGSNIWFEKEAKDLLPEGFTHESSPNGHFTKEQDIMDVWFDSGSSHQAVLEE 539
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL TSVA+ AP++ V HGF +D G KMSKS+G
Sbjct: 540 RDDLQRPADLYLEGSDQYRGWFNSSLTTSVAVTGKAPYKGVLSHGFALDGDGRKMSKSLG 599
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV+ + + G D+LR WVA+ V
Sbjct: 600 NVMVPEKV-----------------------------MKQLGADILRLWVAS-VDYQSDV 629
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ IL + +KIR++ R+LLG L + + S+ R VD +ML +L +
Sbjct: 630 RVSDPILKQVAEVYRKIRNTYRFLLGNLADFDPKSNSVPYDQLREVDQFMLVKLNDLVKN 689
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ + Y ++++A + NF +LS+FY KD LY +S N E R + L+
Sbjct: 690 VKSSYDKYEFASIYHAVNNFCTLDLSSFYLDFAKDVLYIESENNEERRAMQTVLYECLVA 749
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQG 1021
L + ++PI+ H A+EV+S+LP +G
Sbjct: 750 LTKLMSPILSHTADEVWSYLPGVEG 774
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E +G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYKKVQERTSGRPLFVLHDGPPYANGNIHMGHALNKVLKDFIVRYKSMNGFHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK + +A E ++ Q+ +F+ GV DW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTIAEFRKLCEEYAYEQVDNQRTQFKQLGVRGDWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F ++ K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGDMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKRSPSIYVGF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L EG +IWTTTPW++PAN IA + L Y V S K +VA+ L+E
Sbjct: 213 DITDGKGVLAEGT---QMIIWTTTPWTIPANLGIAVHKDLSYVVVSEKEKQYVVAEDLLE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ + D V G+ L+ + HP+ +++ L +L V++ GTG VH AP
Sbjct: 270 EVAKNLEWEDYSVSKKVKGEELEHLVAKHPLY-DRKSLVIL-GDHVTTDSGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFLVGKKYGLDVLCPVDDKGVMTAEA-PGFEGLFYDKANKPITEKLQEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF ++ + E L
Sbjct: 387 FITHSYPHDWRTKKPVIFRATAQWFASIDKFRKELL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 VDDKGVMTAEA-PGFEGLFYDKANKPITEKLQEVGALLKLTFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++ + E L + ++P + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIDKFRKELLEAVNETKWIPSWGETRLFNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L EHG + W+ + LL
Sbjct: 466 AENGEEIITDET-IEHVSNLFREHGSNIWFEKEAKDLL 502
Score = 43.9 bits (102), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 1024 SSFCHFKV---YLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLA 1080
++FC + YL + AK +LY +S N E R + L+ L + ++PI+ H A
Sbjct: 707 NNFCTLDLSSFYLDF----AKDVLYIESENNEERRAMQTVLYECLVALTKLMSPILSHTA 762
Query: 1081 EEVYSHLPSRQG 1092
+EV+S+LP +G
Sbjct: 763 DEVWSYLPGVEG 774
>gi|229186136|ref|ZP_04313305.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|228597312|gb|EEK54963.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
Length = 921
Score = 363 bits (933), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 324/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF+++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVSKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF+++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVSKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|196035856|ref|ZP_03103258.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
gi|218905025|ref|YP_002452859.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
gi|228928944|ref|ZP_04091976.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228947615|ref|ZP_04109905.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229123409|ref|ZP_04252613.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|254782362|sp|B7JJY2.1|SYI_BACC0 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|195991505|gb|EDX55471.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
gi|218537446|gb|ACK89844.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
gi|228660185|gb|EEL15821.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|228812135|gb|EEM58466.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228830751|gb|EEM76356.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 921
Score = 363 bits (933), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|423395804|ref|ZP_17373005.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-1]
gi|401653546|gb|EJS71090.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-1]
Length = 921
Score = 363 bits (933), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 322/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNNEKYIIASELFETVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPGENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFNAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNNEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|384181710|ref|YP_005567472.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324327794|gb|ADY23054.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 921
Score = 363 bits (933), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 227/619 (36%), Positives = 326/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERND 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNH--SESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + SE+T +I+ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|228935211|ref|ZP_04098037.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824376|gb|EEM70182.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 913
Score = 363 bits (933), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHLGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 414
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 339 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 397
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 398 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 457
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 458 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|228916533|ref|ZP_04080099.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228843112|gb|EEM88194.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 913
Score = 363 bits (933), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 414
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 339 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 397
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 398 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 457
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 458 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|423389795|ref|ZP_17367021.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
gi|401641886|gb|EJS59603.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
Length = 921
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 333/643 (51%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L N SE+T +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + + R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
V PI+PH A+EV+ ++P + + + GS A R
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEATEVEGSEALR 795
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ G+ ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGIRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|260583475|ref|ZP_05851223.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
gi|260158101|gb|EEW93169.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
Length = 929
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 227/642 (35%), Positives = 339/642 (52%), Gaps = 58/642 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ K+ L E D +IWTTTPW+LPAN I +
Sbjct: 192 SSLAEAEIEYK-DVESASIYVAFKVKDGKGLLGE---DTSFVIWTTTPWTLPANLGIFVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y+ +VAK LVE+L T +++++ +FPG L+ +T HP +R+
Sbjct: 248 PDYVYAQVKTSAGTFVVAKDLVESLTATLGWENVEILQEFPGSALEYMTAWHPFY--ERE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ +V+ GTGLVH AP HG+DDF + + VL+ + +QG Y+ D PG EG+
Sbjct: 306 SLVMNGDYVTLDAGTGLVHTAPGHGEDDFYYSRKYNLAVLSPVDSQGCYT-DEAPGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L +Y HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 365 FYADANKVITDLLTEKGALLNLSYFVHSYPHDWRTKKPVIFRATPQWFASIDAFRQEILD 424
Query: 656 CLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E +V + S + + + + R W ISRQRVWGVP+PVFY +G+ II E +H
Sbjct: 425 VIENDVKWYHPSGQVRIYNMVRDRGDWVISRQRVWGVPLPVFYAENGEPIITPETT-EHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
+ ++HG D W+ + LL + N TK DI+D+WFDSG S + VL +
Sbjct: 484 AQIFEKHGSDVWFEWDAKDLLPEGFTHPDSPNGIFTKELDIMDVWFDSGSSHAGVLGTRE 543
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SSL TSVA+ H AP+++V GFV+D +G KMSKS+GNV
Sbjct: 544 ELSFPADMYLEGSDQYRGWFNSSLTTSVAIHHQAPYKSVLSQGFVMDGEGKKMSKSLGNV 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
IS AK++ G D++R WV++ + V I
Sbjct: 604 ISP-----------------------------AKEMKTKGADIIRLWVSS-VDYESDVRI 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
+ILN + +KIR+++R++L + +++ R VD YML R + +++
Sbjct: 634 SDDILNQVSEVYRKIRNTMRFMLANTTDFDPKAHAVAFEDLRTVDQYMLVRFNQLVDSIR 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +Q++ + ++NF +LS FY KD +Y D NG R + L++I L
Sbjct: 694 KAYDNYQFSTVYQGVINFCTVDLSQFYLDFAKDVVYIDQENGFERRAMQTVLYDILVKLT 753
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
+ ++PI+ H EEV+ +L + + F Y G A
Sbjct: 754 KLLSPILVHTTEEVWKYLKEEEA-YVQLAEFPEVTHYEGEEA 794
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 231/399 (57%), Gaps = 15/399 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ LY+ ++ GKP F+LHDGPPYANG H+GHA+NKI KD +RS + G R +VPG
Sbjct: 34 ANLYAQRQLKNEGKPSFVLHDGPPYANGDVHMGHALNKISKDFIVRSKSMSGFRAPFVPG 93
Query: 65 WDCHGLPIELKAITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WD HGLPIE +A+ + + K +S + RK +A I+ Q+ F+ GV W+ N
Sbjct: 94 WDTHGLPIE-QALANAEGVDRKKMSVAEFRKLCAEYAWRQIDNQRTVFKRLGVTGTWD-N 151
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T E+ Q+ F + + YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY
Sbjct: 152 PYVTLKPEFEAEQIRVFGKMAENGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVESASIY 210
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ K+ L E D +IWTTTPW+LPAN I +P Y+ +VAK
Sbjct: 211 VAFKVKDGKGLLGE---DTSFVIWTTTPWTLPANLGIFVHPDYVYAQVKTSAGTFVVAKD 267
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
LVESL T ++E++ +FPG L+ +T HP +R+ ++ +V+ GTGLVH
Sbjct: 268 LVESLTATLGWENVEILQEFPGSALEYMTAWHPFY--ERESLVMNGDYVTLDAGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DDF + + VL+ + +QG Y+ D PG EG+ K L E L
Sbjct: 326 APGHGEDDFYYSRKYNLAVLSPVDSQGCYT-DEAPGFEGMFYADANKVITDLLTEKGALL 384
Query: 360 TENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 385 NLSYFVHSYPHDWRTKKPVIFRATPQWFASIDAFRQEIL 423
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
L+ + +QG Y+ D PG EG+ K L E L +Y HSYP+DWRTKKPV
Sbjct: 345 LSPVDSQGCYT-DEAPGFEGMFYADANKVITDLLTEKGALLNLSYFVHSYPHDWRTKKPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A+ QWF + + E L +E V + S + + + + R W ISRQRVWGVP+
Sbjct: 404 IFRATPQWFASIDAFRQEILDVIENDVKWYHPSGQVRIYNMVRDRGDWVISRQRVWGVPL 463
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY +G+ II E +H + ++HG D W+ + LL
Sbjct: 464 PVFYAENGEPIITPETT-EHVAQIFEKHGSDVWFEWDAKDLL 504
>gi|373857243|ref|ZP_09599985.1| isoleucyl-tRNA synthetase [Bacillus sp. 1NLA3E]
gi|372452893|gb|EHP26362.1| isoleucyl-tRNA synthetase [Bacillus sp. 1NLA3E]
Length = 921
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 229/624 (36%), Positives = 331/624 (53%), Gaps = 62/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L D +IWTTTPW++PAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKRSASIYVAFNVKDGKGVL---DADTKIVIWTTTPWTIPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L Y V KG +VA+ L+E + W T VV G L++I +HP+
Sbjct: 247 PDLTYVVVEEKGLKYLVAEALLEAVTTEIGWENPT---VVKKVKGNELENIIALHPLYG- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ V++ GTG VH AP HG+DDFL+ + VLN + ++G + +A PG
Sbjct: 303 -RESLVMLGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLDVLNPVDDKGHMTHEA-PGF 360
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L ++ HSYP+DWRTKKPVI +A+ QWF + + E
Sbjct: 361 EGLFYEKANKPITEKLEEAGALLKLSFITHSYPHDWRTKKPVIFRATAQWFASIKDFRSE 420
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++E +VPE + L + + R WCISRQR WGVPIPVFY +G+ II +E I
Sbjct: 421 LLEAVKETKWVPEWGETRLFNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIN 479
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L E+G + W+ + LL + N TK DI+D+WFDSG S VL++
Sbjct: 480 HISALFRENGSNIWFEREAKDLLPEGFTHPGSPNGVFTKETDIMDVWFDSGSSHQAVLEE 539
Query: 766 -----KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+PA +Y+EG DQ GWF SSL T VA+ AP++ V HGF +D +G KMSKS+G
Sbjct: 540 REDLQRPADLYLEGSDQYRGWFNSSLSTGVAVTGKAPYKGVLSHGFALDGEGRKMSKSIG 599
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV+ +P AK + G D+LR WVA+ V
Sbjct: 600 NVV-----------IP------------------AKVMDQLGADILRLWVAS-VDYQADV 629
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ IL + +KIR++ R+LLG L + + T ++ R VD +ML +L + T
Sbjct: 630 RVSDAILKQVAEVYRKIRNTFRFLLGNLADFNPETDAVPFEKLREVDQFMLVKLNKVIKT 689
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +++A + NF +LS+FY KD LY ++ N R S LH
Sbjct: 690 VRHSYENYEFATIYHAVNNFCTLDLSSFYLDFAKDVLYIEANNNLERRSIQTVLHESLLT 749
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQ 1020
L++ VAPI+ H A+EV++++PS +
Sbjct: 750 LVKLVAPILSHTADEVWAYIPSEK 773
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 234/400 (58%), Gaps = 20/400 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y + G+P FILHDGPPYANG H+GHA+NK+LKD +R + G YVPGW
Sbjct: 35 DIYGKVQARTKGRPMFILHDGPPYANGDIHMGHALNKVLKDFIVRYKSMSGFNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T+K K ++ + RK + +A E IN Q+++F+ GV ADWE N Y
Sbjct: 95 DTHGLPIE-QALTNKGVKRKEMTVAEFRKLCEKYAYEQINNQRSQFKRLGVRADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 153 ITLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L D +IWTTTPW++PAN I+ +P L Y V KG +VA+ L+
Sbjct: 212 FNVKDGKGVL---DADTKIVIWTTTPWTIPANLGISVHPDLTYVVVEEKGLKYLVAEALL 268
Query: 243 ES----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+ + W T VV G L++I +HP+ R+ ++ V++ GTG VH
Sbjct: 269 EAVTTEIGWENPT---VVKKVKGNELENIIALHPLYG--RESLVMLGEHVTTDAGTGCVH 323
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DDFL+ + VLN + ++G + +A PG EGL K L E L
Sbjct: 324 TAPGHGEDDFLVGQKYGLDVLNPVDDKGHMTHEA-PGFEGLFYEKANKPITEKLEEAGAL 382
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 383 LKLSFITHSYPHDWRTKKPVIFRATAQWFASIKDFRSELL 422
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
LN + ++G + +A PG EGL K L E L ++ HSYP+DWRTKKPV
Sbjct: 344 LNPVDDKGHMTHEA-PGFEGLFYEKANKPITEKLEEAGALLKLSFITHSYPHDWRTKKPV 402
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF + + E L ++ +VPE + L + + R WCISRQR WGVPIP
Sbjct: 403 IFRATAQWFASIKDFRSELLEAVKETKWVPEWGETRLFNMVRDRGDWCISRQRAWGVPIP 462
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY +G+ II +E I H L E+G + W+ + LL
Sbjct: 463 VFYAENGEPIITDE-TINHISALFRENGSNIWFEREAKDLL 502
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 1024 SSFCHFKV---YLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLA 1080
++FC + YL + AK +LY ++ N R S LH L++ VAPI+ H A
Sbjct: 707 NNFCTLDLSSFYLDF----AKDVLYIEANNNLERRSIQTVLHESLLTLVKLVAPILSHTA 762
Query: 1081 EEVYSHLPSRQ 1091
+EV++++PS +
Sbjct: 763 DEVWAYIPSEK 773
>gi|423385397|ref|ZP_17362653.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG1X1-2]
gi|423528245|ref|ZP_17504690.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus HuB1-1]
gi|401635453|gb|EJS53208.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG1X1-2]
gi|402451908|gb|EJV83727.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus HuB1-1]
Length = 921
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKFIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKFIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|295706354|ref|YP_003599429.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
gi|294804013|gb|ADF41079.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
Length = 921
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 221/618 (35%), Positives = 326/618 (52%), Gaps = 54/618 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + L + D +IWTTTPW++PANQ IA N
Sbjct: 192 SALAEAEIEYY-DKRSASIYVAFNVKDGKGVLEQ---DEKFIIWTTTPWTMPANQGIAVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+YSV A +VA L+E + + D + G L+ + HPI K RD
Sbjct: 248 PELQYSVVEADEAKYVVATELIETVAKEIEWADYKTLRTVKGSELERVVAEHPIYK--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 306 SLVVLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDSKGHMTNEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLLK 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCT 714
+E+ +VP + L + + R WCISRQR WGVPIPVFY + + I+ + I+H
Sbjct: 425 AVEKTKWVPTWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYAENEEPIITDETIEHVSN 484
Query: 715 LIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
L EHG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 485 LFREHGSNVWFEREAKDLLPEGFTHEGSPNGRFTKETDIMDVWFDSGSSHQAVLEEREDL 544
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSL TSVA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 545 HRPADLYLEGSDQYRGWFNSSLSTSVAVTGEAPYKGVLSHGFALDGEGRKMSKSLGNVV- 603
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+P K + G D+LR WVA+ V +
Sbjct: 604 ----------IPE------------------KVMKQLGADILRLWVAS-VDYQADVRVSD 634
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTL 940
NIL + +KIR++ R+LLG L + + +T +++ R VD YML +L + + +
Sbjct: 635 NILKQVAEVYRKIRNTFRFLLGNLADFNPTTDAVAVEDLREVDRYMLVKLNKLIDKVKKS 694
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y ++++ + NF ++S+FY KD LY ++ N R S L+ L +
Sbjct: 695 YDSYEFSSIYHAVHNFCTIDMSSFYLDFAKDVLYIEAENNVERRSIQTVLYETLLSLTKL 754
Query: 1001 VAPIMPHLAEEVYSHLPS 1018
V+PI+ H A+EV+ H+P+
Sbjct: 755 VSPILSHTADEVWVHIPN 772
Score = 283 bits (725), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 227/396 (57%), Gaps = 13/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y ++ G+P F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGWD
Sbjct: 36 IYEKVQKRTEGRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +K K ++ + RK + +A E +N Q+ +F+ GV DW+ N Y
Sbjct: 96 THGLPIETALTKNKKVNRKEMTVAEFRKLCEQYAWEQVNGQREQFKRLGVRGDWD-NPYV 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T +Y Q+ F ++ K+ YIY+ LKPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 155 TLQPQYEAQQIKVFGDMAKKGYIYKGLKPVYWSPSSESALAEAEIEYY-DKRSASIYVAF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L + D +IWTTTPW++PANQ IA NP L+YSV A +VA L+E
Sbjct: 214 NVKDGKGVLEQ---DEKFIIWTTTPWTMPANQGIAVNPELQYSVVEADEAKYVVATELIE 270
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ + D + + G L+ + HPI K RD ++ V++ GTG VH AP
Sbjct: 271 TVAKEIEWADYKTLRTVKGSELERVVAEHPIYK--RDSLVVLGDHVTTDAGTGCVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L +
Sbjct: 329 HGEDDFIVGQKYGLEVLCPVDSKGHMTNEA-PGFEGLFYDKANKPITDKLEEEGALLKLS 387
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 388 FITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLL 423
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L ++ HSYP+DWRTKKP I +
Sbjct: 348 VDSKGHMTNEA-PGFEGLFYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L +E +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKDFREDLLKAVEKTKWVPTWGETRLYNMVRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ + I+ + I+H L EHG + W+ + LL
Sbjct: 467 AENEEPIITDETIEHVSNLFREHGSNVWFEREAKDLL 503
>gi|402555981|ref|YP_006597252.1| isoleucyl-tRNA ligase [Bacillus cereus FRI-35]
gi|401797191|gb|AFQ11050.1| isoleucyl-tRNA ligase [Bacillus cereus FRI-35]
Length = 921
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVVLGDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVVLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|49481690|ref|YP_037957.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196038708|ref|ZP_03106016.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|423550356|ref|ZP_17526683.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus ISP3191]
gi|81395073|sp|Q6HER9.1|SYI1_BACHK RecName: Full=Isoleucine--tRNA ligase 1; AltName: Full=Isoleucyl-tRNA
synthetase 1; Short=IleRS 1
gi|49333246|gb|AAT63892.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|196030431|gb|EDX69030.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|401189972|gb|EJQ97022.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus ISP3191]
Length = 921
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|163941635|ref|YP_001646519.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|229013080|ref|ZP_04170245.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|423489072|ref|ZP_17465754.1| isoleucyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|423494797|ref|ZP_17471441.1| isoleucyl-tRNA synthetase [Bacillus cereus CER057]
gi|423498411|ref|ZP_17475028.1| isoleucyl-tRNA synthetase [Bacillus cereus CER074]
gi|423598793|ref|ZP_17574793.1| isoleucyl-tRNA synthetase [Bacillus cereus VD078]
gi|423661265|ref|ZP_17636434.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM022]
gi|423669470|ref|ZP_17644499.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM034]
gi|423674351|ref|ZP_17649290.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM062]
gi|254782368|sp|A9VTD5.1|SYI_BACWK RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|163863832|gb|ABY44891.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|228748334|gb|EEL98194.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|401150890|gb|EJQ58342.1| isoleucyl-tRNA synthetase [Bacillus cereus CER057]
gi|401160460|gb|EJQ67838.1| isoleucyl-tRNA synthetase [Bacillus cereus CER074]
gi|401237063|gb|EJR43520.1| isoleucyl-tRNA synthetase [Bacillus cereus VD078]
gi|401298597|gb|EJS04197.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM034]
gi|401301306|gb|EJS06895.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM022]
gi|401309902|gb|EJS15235.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM062]
gi|402432320|gb|EJV64379.1| isoleucyl-tRNA synthetase [Bacillus cereus BtB2-4]
Length = 921
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 333/643 (51%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L N SE+T +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + + R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
V PI+PH A+EV+ ++P + + + GS A R
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEATEVEGSEALR 795
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|228922648|ref|ZP_04085948.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423582105|ref|ZP_17558216.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD014]
gi|228837077|gb|EEM82418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401212984|gb|EJR19725.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD014]
Length = 921
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 324/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|407922356|gb|EKG15457.1| Aminoacyl-tRNA synthetase class Ia [Macrophomina phaseolina MS6]
Length = 869
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 231/666 (34%), Positives = 351/666 (52%), Gaps = 71/666 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD---LHALIWTTTPWSLPANQF 473
GTALAE+ELEY H S + Y+ + ++P+ L G D L ALIWTTTPW+LPAN+
Sbjct: 46 GTALAEAELEYDDGHRSTAAYVSFSITKLPSSLA-GRVDISKLGALIWTTTPWTLPANRA 104
Query: 474 IAFNPALEYSVASV--------KGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDI 524
IA + LEY V + + + +V K ++ L+ T +T+ ++ D PG L
Sbjct: 105 IAVHSELEYCVVEMLRPTATGDRASQFLVGKDRLDALQQTLKTEFQILVDRIPGSELSGH 164
Query: 525 T-YIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
T Y++P+ +Q + +L A FVS++ G+GLVH AP HG DD+ L IP + ++
Sbjct: 165 TEYVNPLEPDQAASQPILHADFVSATSGSGLVHIAPGHGMDDYNLCRTAGIPAFAPVDDK 224
Query: 583 GKYSPDAGPG----LEGLNILGDGKDQVLHLVEP----DVLWTENYQHSYPYDWRTKKPV 634
G ++ +A PG + GL++ G+G +L +++ ++ ++ H YP DWRTK+PV
Sbjct: 225 GCFTKEALPGQAYRIAGLSVQGEGSQAILDILKTMPRDPLVAVQDITHKYPIDWRTKQPV 284
Query: 635 ILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIP 694
I++A++QWF D E IK AL L++V F+P++ + L + R WC+SRQR WGVPIP
Sbjct: 285 IIRATEQWFADVEGIKDGALQALDDVEFLPKTGRARLESFVRGRSQWCVSRQRAWGVPIP 344
Query: 695 VFYD-----GDTIIVNEANIKHFCTLIDEHGPDFWWS-LSVEQLLNTSDVNSNVTKSNDI 748
Y+ G + +I+H ++++ G D WW+ E + + D
Sbjct: 345 ALYEKTESGGLKAHMTGDSIEHIMKVVEQRGIDAWWTDAEDEPAWIPEGLQGTFVRGRDT 404
Query: 749 LDIWFDSGISWSHVLKDKP----AHVYMEGMDQINGWFMSSLLTSVA------------- 791
+D+WFDSG +W+ +L +P A V++EG DQ GWF SSLLT +A
Sbjct: 405 MDVWFDSGTAWT-LLDRRPGQPVADVFLEGTDQHRGWFQSSLLTHIAHQSSKAGSIDRSS 463
Query: 792 -LKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGA------KKLPAYEKSVGN 844
K APF+ + HGF +D+ G KMSKS+GN IS I G+ K + S N
Sbjct: 464 KPKMLAPFKVLITHGFTLDQDGRKMSKSLGNTISPSQIMDGSLLPPLKLKKKQKKPSNAN 523
Query: 845 VISAHDITQGAKKLPAYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRY 903
+ T G + A G D LR WVA+ +KD V IG+ +L S + K R + ++
Sbjct: 524 ANANAAATPGKETYDAMGPDALRLWVASSDYTKD--VIIGQPVLASVTQSLHKYRVTFKW 581
Query: 904 LLGVLHNHSES----------TGSISRY--VDVYMLKRLCEFQNTMDTLYGEFQYARASR 951
LLGVL + S T R+ +D +L + + Y +++ R +
Sbjct: 582 LLGVLSDFDRSASAPAPAQARTTVPGRWTLIDAIARHQLARTAHAVHAAYASYEFYRGTA 641
Query: 952 VLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEE 1011
L + +LSAF+F +KDR+Y + E R S L +IF LL +AP+ P L EE
Sbjct: 642 ALSKYTTIDLSAFFFETLKDRVYAGTP--EDRRSAQRVLCDIFDELLDMLAPVCPLLVEE 699
Query: 1012 VYSHLP 1017
V++ P
Sbjct: 700 VWALTP 705
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 182/306 (59%), Gaps = 24/306 (7%)
Query: 114 LADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPD 173
+ADW+ Y T +K + QL F + ++ IYR KPVYWSPSS TALAE+ELEY
Sbjct: 1 MADWD-RAYLTMEKGFEMRQLSIFKAMVEKGLIYRQFKPVYWSPSSGTALAEAELEYDDG 59
Query: 174 HVSKSIYLKIKLNQVPAHLLEGATD---LHALIWTTTPWSLPANQFIAFNPALEYSVASV 230
H S + Y+ + ++P+ L G D L ALIWTTTPW+LPAN+ IA + LEY V +
Sbjct: 60 HRSTAAYVSFSITKLPSS-LAGRVDISKLGALIWTTTPWTLPANRAIAVHSELEYCVVEM 118
Query: 231 --------KGANVIVAKCLVESLKWTFQTDIEVVCD-FPGQYLQDIT-YIHPINKEQRDL 280
+ + +V K +++L+ T +T+ +++ D PG L T Y++P+ +Q
Sbjct: 119 LRPTATGDRASQFLVGKDRLDALQQTLKTEFQILVDRIPGSELSGHTEYVNPLEPDQAAS 178
Query: 281 K-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG---- 335
+ +L A FVS++ G+GLVH AP HG DD+ L IP + ++G ++ +A PG
Sbjct: 179 QPILHADFVSATSGSGLVHIAPGHGMDDYNLCRTAGIPAFAPVDDKGCFTKEALPGQAYR 238
Query: 336 LEGLNILGDGKDQVLHLVEP----DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
+ GL++ G+G +L +++ ++ ++ H YP DWRTK+PVI++A++QWF D E
Sbjct: 239 IAGLSVQGEGSQAILDILKTMPRDPLVAVQDITHKYPIDWRTKQPVIIRATEQWFADVEG 298
Query: 392 IKPEAL 397
IK AL
Sbjct: 299 IKDGAL 304
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 13/161 (8%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEP----DVLWTENYQHSYPYDWRT 1160
+ ++G ++ +A PG + GL++ GEG +L +++ ++ ++ H YP DWRT
Sbjct: 221 VDDKGCFTKEALPGQAYRIAGLSVQGEGSQAILDILKTMPRDPLVAVQDITHKYPIDWRT 280
Query: 1161 KKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWG 1220
K+PVI++A++QWF D E IK AL L+ V F+P++ + L + R WC+SRQR WG
Sbjct: 281 KQPVIIRATEQWFADVEGIKDGALQALDDVEFLPKTGRARLESFVRGRSQWCVSRQRAWG 340
Query: 1221 VPIPVFYD-----GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
VPIP Y+ G + +I+H ++++ G D WW+
Sbjct: 341 VPIPALYEKTESGGLKAHMTGDSIEHIMKVVEQRGIDAWWT 381
>gi|402219199|gb|EJT99273.1| mitochondrial isoleucyl-tRNA synthetase [Dacryopinax sp. DJM-731 SS1]
Length = 1024
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 228/642 (35%), Positives = 333/642 (51%), Gaps = 75/642 (11%)
Query: 417 GTALAESELEYKPDHISKSIYLK--IKLNQVPAHLLEG-----ATDLHALIWTTTPWSLP 469
GTALAE EL Y H SKS+Y+K IK + L +G DL+ L+WTTTPW+LP
Sbjct: 235 GTALAEGELVYDDSHKSKSVYVKFPIKREDMSPELRKGFDSTLLEDLNFLVWTTTPWTLP 294
Query: 470 ANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
+N +A N ++Y +A + N+I+A VE L T + G + Y H
Sbjct: 295 SNMAVAINEEIDYVIARGE-HNIIIAADAVEPLPDKMGTSL-------GSDILGTKYHHY 346
Query: 530 INK-EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL----ALAEKIPVLNLITNQGK 584
K + + A +V + GTG+VHCAP HG DD+ L E P+++ + +G+
Sbjct: 347 YQKPDAPPNPVFSARWVKADSGTGVVHCAPGHGADDYFTMTSAGLLEDHPLVSPVDGKGE 406
Query: 585 YSPDA---------GPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 633
Y+ D G L G ++ G ++VL + + + +H YPYDW+TK P
Sbjct: 407 YTEDILGHVPHSRLGGSLIGRSVQDKGNEEVLRQLREAGRSIHVKQIKHKYPYDWKTKTP 466
Query: 634 VILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPI 693
VI +A+ QWF +K +AL LE V F PE+ + L I +R WCISRQR WGVPI
Sbjct: 467 VITRATSQWFASIADVKEKALKVLENVKFHPEAGRARLESFIRERSEWCISRQRNWGVPI 526
Query: 694 PVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDI 751
P +D D ++ ++ H ++++HG D+WW VE + N+ K D +D+
Sbjct: 527 PALHDIATDEAYLSAESLDHIIPVLEKHGIDYWWEGPVEDFIPPHLQGKNLRKGTDTMDV 586
Query: 752 WFDSGISWS-----HVLKD----KPAHVYMEGMDQINGWFMSSLLTSVAL----KHTAPF 798
WFDSG SWS H K + + V +EG DQ GWF S LLT + + TAP+
Sbjct: 587 WFDSGSSWSLLGNLHGEKQEGGPRISDVCLEGSDQHRGWFQSLLLTRIIAAAEGEETAPY 646
Query: 799 RNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKL 858
+ V HGFV+DE G KMSKS GNVIS + G T+ KL
Sbjct: 647 KTVITHGFVLDEHGRKMSKSDGNVISPLAVING--------------------TEQKSKL 686
Query: 859 PAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLH-------NH 911
P YG DVLR W A+ D + IG+NIL S + +K+R+S R++LGVL +
Sbjct: 687 PVYGADVLRLWTASADYTD-DMAIGQNILKQSAESYRKLRNSARFMLGVLAIPNKGPVDQ 745
Query: 912 SESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
+ST ++ +++ RL + + T Y +Q+ R L +F LSA YF+ KD
Sbjct: 746 LQSTKPGMGLIERWIMDRLYQTERTCREAYERYQFHRVVHALTDFSTISLSAQYFSFRKD 805
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
+YCD+ + + R + + + N+ HV +API+P +AEE++
Sbjct: 806 AIYCDAQD-QTRAAIVTVMKNLLHVYKGLLAPILPLVAEEIH 846
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/417 (41%), Positives = 234/417 (56%), Gaps = 32/417 (7%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ LY Q E K FILHDGPPYANG HIGHAVNKILKDI R LLQGKRVHY G
Sbjct: 79 AALYRQQWEERKDKEFFILHDGPPYANGHLHIGHAVNKILKDIINRFQLLQGKRVHYSAG 138
Query: 65 WDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN-CYH 123
WDCHGLPIE KA+ D SP IR+ ++++A ++N Q+ EFE +LAD+ Y
Sbjct: 139 WDCHGLPIENKALVGLDPSASPTKIRQVSRHYASVSVNIQRREFEQMKILADFSDPWTYR 198
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK- 182
T+DKEY QL F + K+ I R +P++WSP+S TALAE EL Y H SKS+Y+K
Sbjct: 199 TYDKEYEIRQLRVFQQMVKKGLIVRRYRPIWWSPASGTALAEGELVYDDSHKSKSVYVKF 258
Query: 183 -IKLNQVPAHLLEG-----ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVI 236
IK + L +G DL+ L+WTTTPW+LP+N +A N ++Y +A + N+I
Sbjct: 259 PIKREDMSPELRKGFDSTLLEDLNFLVWTTTPWTLPSNMAVAINEEIDYVIARGE-HNII 317
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINK-EQRDLKLLPAGFVSSSKGTG 295
+A VE L T + G + Y H K + + A +V + GTG
Sbjct: 318 IAADAVEPLPDKMGTSL-------GSDILGTKYHHYYQKPDAPPNPVFSARWVKADSGTG 370
Query: 296 LVHCAPAHGQDDFLL----ALAEKIPVLNLITNQGKYSPDA---------GPGLEGLNIL 342
+VHCAP HG DD+ L E P+++ + +G+Y+ D G L G ++
Sbjct: 371 VVHCAPGHGADDYFTMTSAGLLEDHPLVSPVDGKGEYTEDILGHVPHSRLGGSLIGRSVQ 430
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
G ++VL + + + +H YPYDW+TK PVI +A+ QWF +K +AL
Sbjct: 431 DKGNEEVLRQLREAGRSIHVKQIKHKYPYDWKTKTPVITRATSQWFASIADVKEKAL 487
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 13/184 (7%)
Query: 1109 ITNQGKYSPDA---------GPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYD 1157
+ +G+Y+ D G L G ++ +G ++VL + + + +H YPYD
Sbjct: 401 VDGKGEYTEDILGHVPHSRLGGSLIGRSVQDKGNEEVLRQLREAGRSIHVKQIKHKYPYD 460
Query: 1158 WRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQR 1217
W+TK PVI +A+ QWF +K +AL LE V F PE+ + L I +R WCISRQR
Sbjct: 461 WKTKTPVITRATSQWFASIADVKEKALKVLENVKFHPEAGRARLESFIRERSEWCISRQR 520
Query: 1218 VWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKS 1275
WGVPIP +D D ++ ++ H ++++HG D+WW PVE + N+ K
Sbjct: 521 NWGVPIPALHDIATDEAYLSAESLDHIIPVLEKHGIDYWWEGPVEDFIPPHLQGKNLRKG 580
Query: 1276 NQGL 1279
+
Sbjct: 581 TDTM 584
>gi|118479116|ref|YP_896267.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|118418341|gb|ABK86760.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
Length = 923
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 193 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 249 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 307 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 365
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 366 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 425
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 426 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 485 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 545 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 605 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 635 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 695 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 754
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 755 LVTPILPHTADEVWPYIPG 773
Score = 281 bits (718), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 38 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 97
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 98 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 155
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 156 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 214
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 215 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 271
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 272 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 329
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 330 HGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 388
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 389 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 424
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 349 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 408 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 468 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 504
>gi|229071395|ref|ZP_04204617.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
gi|228711686|gb|EEL63639.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
Length = 913
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 414
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 347 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 406
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 407 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 466
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 467 DE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|402564761|ref|YP_006607485.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-771]
gi|423359068|ref|ZP_17336571.1| isoleucyl-tRNA synthetase [Bacillus cereus VD022]
gi|423561699|ref|ZP_17537975.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|401084940|gb|EJP93186.1| isoleucyl-tRNA synthetase [Bacillus cereus VD022]
gi|401201956|gb|EJR08821.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|401793413|gb|AFQ19452.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-771]
Length = 921
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|218899049|ref|YP_002447460.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
gi|254782363|sp|B7IUQ5.1|SYI_BACC2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|218542524|gb|ACK94918.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
Length = 921
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|315917619|ref|ZP_07913859.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|313691494|gb|EFS28329.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
Length = 931
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 209/622 (33%), Positives = 333/622 (53%), Gaps = 54/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY+++K N + + + + +IWTTTPW+LPAN I+ N
Sbjct: 193 TALAEAEIEYH-DHTSPSIYVRMKANSDLLEKISLSEEAYVVIWTTTPWTLPANVAISLN 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P +Y V + N+I+ K L + + ++V +F G L+ +Y HP R
Sbjct: 252 PDFDYGVYKTEKGNLILGKDLADTAFAEMGIENPELVKEFKGSTLEMTSYQHPFL--DRT 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQ+D+++ +P+++ I +G + +AGP GL
Sbjct: 310 GYIILGTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGL 369
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K + HL E +L + HSYP+DWR+K PVI +A++QWF+ E ++ +A
Sbjct: 370 FYEKANKAIIDHLTETGFLLKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLREKA 429
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L L++V F+P + + + RP WCISRQRVWGVPIPVFY+ +T I N+ + H
Sbjct: 430 LRALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFYNEETGEEIFNQDILNH 489
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVLKD 765
+ +++ G D W + E+L+ ++ ++ K +I+D+WFDSG S VL+
Sbjct: 490 VISFVEKEGSDAWLLHTSEELIGEENLKKYHLEGISLRKETNIMDVWFDSGSSHRAVLET 549
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
PA +Y+EG DQ GWF +SLLTSV + APF+ + HGFV D KG KMSKS G
Sbjct: 550 WEGLRWPADLYLEGSDQHRGWFQTSLLTSVGSRGVAPFKKILTHGFVNDGKGEKMSKSKG 609
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV++ I + YG D+LR W A+ ++ V
Sbjct: 610 NVVAPEKI-----------------------------IKQYGADILRLWCASVDYRE-DV 639
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I NI+ + +++R++ RY+LG + ++ +D + L +L + +
Sbjct: 640 KISDNIVKQMAETYRRVRNTARYILGNSYGFDPKKDAVPYQDLLEIDKWALHKLEMLKKS 699
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ + + F ++SAFY ++KDRLY + + AR S + I
Sbjct: 700 VGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIKDRLYTEKEDSIARRSAQTVMIEILMT 759
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L++ +API+ AEE++ HLP
Sbjct: 760 LVKMIAPILSFTAEEIWEHLPE 781
Score = 302 bits (774), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 160/386 (41%), Positives = 233/386 (60%), Gaps = 9/386 (2%)
Query: 10 WQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+++ GK FILHDGPPYANG HIGHA+NKILKDI ++ LQG + Y+PGWD HG
Sbjct: 40 YEKGLAKGKESFILHDGPPYANGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHG 99
Query: 70 LPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFD 126
LPIELK + SK K ++ L+IR+ K +AL+ ++ Q+ EF GV+ WE + Y T
Sbjct: 100 LPIELKVMEKLGSKAKDMTALEIRQLCKEYALKWVDIQREEFIRMGVIGKWE-DPYLTLK 158
Query: 127 KEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN 186
++ QL F LY YI++ LKP+YWSP + TALAE+E+EY DH S SIY+++K N
Sbjct: 159 PQFEAKQLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEIEYH-DHTSPSIYVRMKAN 217
Query: 187 QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
+ + + + +IWTTTPW+LPAN I+ NP +Y V + N+I+ K L ++
Sbjct: 218 SDLLEKISLSEEAYVVIWTTTPWTLPANVAISLNPDFDYGVYKTEKGNLILGKDLADTAF 277
Query: 247 WTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
+ E+V +F G L+ +Y HP R ++ V++ GTG VH AP HGQ
Sbjct: 278 AEMGIENPELVKEFKGSTLEMTSYQHPFL--DRTGYIILGTHVTADAGTGCVHTAPGHGQ 335
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQ 364
+D+++ +P+++ I +G + +AGP GL K + HL E +L +
Sbjct: 336 EDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGLFYEKANKAIIDHLTETGFLLKMKEIT 395
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTE 390
HSYP+DWR+K PVI +A++QWF+ E
Sbjct: 396 HSYPHDWRSKTPVIFRATEQWFVKAE 421
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 5/165 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I +G + +AGP GL K + HL E +L + HSYP+DWR+K PVI +
Sbjct: 352 INYKGYLTEEAGPLFAGLFYEKANKAIIDHLTETGFLLKMKEITHSYPHDWRSKTPVIFR 411
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF+ E ++ +AL L+ V F+P + + + RP WCISRQRVWGVPIPV
Sbjct: 412 ATEQWFVKAEGSDLREKALRALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPV 471
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
FY+ +T I N+ + H + +++ G D W E+L+ ++
Sbjct: 472 FYNEETGEEIFNQDILNHVISFVEKEGSDAWLLHTSEELIGEENL 516
>gi|228960113|ref|ZP_04121777.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228799629|gb|EEM46582.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 913
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 414
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 347 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 406
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 407 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 466
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 467 DE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|196045913|ref|ZP_03113142.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225865877|ref|YP_002751255.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|376267792|ref|YP_005120504.1| isoleucyl-tRNA synthetase [Bacillus cereus F837/76]
gi|254782364|sp|C1EPQ9.1|SYI_BACC3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|196023353|gb|EDX62031.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225789418|gb|ACO29635.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
gi|364513592|gb|AEW56991.1| Isoleucyl-tRNA synthetase [Bacillus cereus F837/76]
Length = 921
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|423656756|ref|ZP_17632055.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD200]
gi|401290497|gb|EJR96191.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD200]
Length = 921
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKKVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKKVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|30021984|ref|NP_833615.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|206971359|ref|ZP_03232310.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
gi|218232297|ref|YP_002368695.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
gi|228940984|ref|ZP_04103542.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228973915|ref|ZP_04134490.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980504|ref|ZP_04140814.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|229047580|ref|ZP_04193170.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
gi|229111365|ref|ZP_04240918.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|229129173|ref|ZP_04258146.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|229146467|ref|ZP_04274838.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|229152093|ref|ZP_04280288.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
gi|296504390|ref|YP_003666090.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|384187956|ref|YP_005573852.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676271|ref|YP_006928642.1| isoleucine--tRNA ligase IleS [Bacillus thuringiensis Bt407]
gi|423412301|ref|ZP_17389421.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG3O-2]
gi|423431914|ref|ZP_17408918.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG4O-1]
gi|423585695|ref|ZP_17561782.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD045]
gi|423628990|ref|ZP_17604739.1| isoleucyl-tRNA synthetase [Bacillus cereus VD154]
gi|423641026|ref|ZP_17616644.1| isoleucyl-tRNA synthetase [Bacillus cereus VD166]
gi|423649757|ref|ZP_17625327.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD169]
gi|452200337|ref|YP_007480418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|81433828|sp|Q819R4.1|SYI1_BACCR RecName: Full=Isoleucine--tRNA ligase 1; AltName: Full=Isoleucyl-tRNA
synthetase 1; Short=IleRS 1
gi|254782365|sp|B7H6N1.1|SYI_BACC4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|29897540|gb|AAP10816.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|206734131|gb|EDZ51302.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
gi|218160254|gb|ACK60246.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
gi|228631442|gb|EEK88076.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
gi|228637100|gb|EEK93559.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|228654410|gb|EEL10275.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|228672141|gb|EEL27432.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|228723827|gb|EEL75182.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
gi|228779324|gb|EEM27581.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228785781|gb|EEM33785.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818663|gb|EEM64730.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|296325442|gb|ADH08370.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|326941665|gb|AEA17561.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401104369|gb|EJQ12346.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG3O-2]
gi|401116670|gb|EJQ24508.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG4O-1]
gi|401233041|gb|EJR39537.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD045]
gi|401268535|gb|EJR74583.1| isoleucyl-tRNA synthetase [Bacillus cereus VD154]
gi|401280087|gb|EJR86009.1| isoleucyl-tRNA synthetase [Bacillus cereus VD166]
gi|401283037|gb|EJR88934.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD169]
gi|409175400|gb|AFV19705.1| isoleucine--tRNA ligase IleS [Bacillus thuringiensis Bt407]
gi|452105730|gb|AGG02670.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 921
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|423452801|ref|ZP_17429654.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG5X1-1]
gi|401139360|gb|EJQ46922.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG5X1-1]
Length = 921
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 226/641 (35%), Positives = 332/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ +V I+A L E ++ T + + +VV G L+ I HP RD
Sbjct: 247 PELEYAIVNVNDEKYIIASELFETVEKTLEWENAEVVKTVKGSELEYIVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I +
Sbjct: 424 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISNVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + ++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPGKNKVAAAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N + R + L+++ L +
Sbjct: 693 AYEAYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + + ++ G+ A
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEVVEVDGAEA 793
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 233/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ +V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVNVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+++ T + + EVV G L+ I HP RD ++ V++ GTG VH AP
Sbjct: 270 TVEKTLEWENAEVVKTVKGSELEYIVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L +E +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I + L EHG + W+ + LL
Sbjct: 475 DE-TISNVADLFREHGSNVWFEREAKDLL 502
>gi|433446183|ref|ZP_20410242.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432000479|gb|ELK21373.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 918
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 228/618 (36%), Positives = 332/618 (53%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +L+G D +IWTTTPW++PAN IA +
Sbjct: 192 SALAEAEIEYK-DKRSPSIYVAFPVKDGKG-VLDG--DEKIVIWTTTPWTIPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+YSV G +VA L+++++ + + V+ G L+ + HP RD
Sbjct: 248 PELQYSVVEADGGKYVVASELLQSVQKEIGWEHVTVLKTVKGSELEYVVAKHPFY--DRD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G Y + PG G+
Sbjct: 306 SLVICGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLGVLCPVDERG-YMTEEAPGFAGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTK+P I +A+ QWF ++I+ + L
Sbjct: 365 FYDDANKAITEKLQEVGALLKLSFITHSYPHDWRTKQPTIFRATAQWFASIDKIREQLLK 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + + + I R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AVEETKWVPAWGEIRIHNMIRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 NLFRQYGSNVWFEREAKDLLPEGFTHPGSPNGRFTKETDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 544 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WVA+ V I
Sbjct: 604 -----------VPA------------------KVMEQLGADILRLWVAS-VDYQADVRIS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
NIL + +KIR++ R++LG L N +E T +I R VD YML +L + +
Sbjct: 634 DNILKQVAEVYRKIRNTFRFMLGNLFDFNPAEHTVAIEQLREVDRYMLIKLNRLIDKVKQ 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +++A + NF +LSAFYF KD LY ++ N R S L+ L +
Sbjct: 694 AYETYEFATIYHEINNFCTVDLSAFYFDFSKDVLYIEAANNHERRSIQTVLYETLVALTK 753
Query: 1000 TVAPIMPHLAEEVYSHLP 1017
VAPI+PH A+EV+S++P
Sbjct: 754 LVAPILPHTADEVWSYIP 771
Score = 273 bits (699), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 226/400 (56%), Gaps = 19/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRKVQERTKDRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYCAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A E I+ Q+ +F+ GV DW+ N Y
Sbjct: 95 DTHGLPIETALTKNKGVNRKEMSVAEFRKLCEQYAYEQIDRQREQFKRLGVRGDWD-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 ITLTPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ +L+G D +IWTTTPW++PAN IA +P L+YSV G +VA L+
Sbjct: 213 FPVKDGKG-VLDG--DEKIVIWTTTPWTIPANLGIAVHPELQYSVVEADGGKYVVASELL 269
Query: 243 ESLK----WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
+S++ W T ++ V G L+ + HP RD ++ V++ GTG VH
Sbjct: 270 QSVQKEIGWEHVTVLKTV---KGSELEYVVAKHPFY--DRDSLVICGEHVTTDAGTGCVH 324
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DDF++ + VL + +G Y + PG G+ K L E L
Sbjct: 325 TAPGHGEDDFIVGQKYGLGVLCPVDERG-YMTEEAPGFAGMFYDDANKAITEKLQEVGAL 383
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTK+P I +A+ QWF ++I+ + L
Sbjct: 384 LKLSFITHSYPHDWRTKQPTIFRATAQWFASIDKIREQLL 423
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 1111 NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKAS 1169
++ Y + PG G+ K L E L ++ HSYP+DWRTK+P I +A+
Sbjct: 349 DERGYMTEEAPGFAGMFYDDANKAITEKLQEVGALLKLSFITHSYPHDWRTKQPTIFRAT 408
Query: 1170 QQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-- 1227
QWF ++I+ + L +E +VP + + + I R WCISRQR WGVPIPVFY
Sbjct: 409 AQWFASIDKIREQLLKAVEETKWVPAWGEIRIHNMIRDRGDWCISRQRAWGVPIPVFYAE 468
Query: 1228 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 469 NGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 503
>gi|228909722|ref|ZP_04073545.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
gi|228850011|gb|EEM94842.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
Length = 913
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYIPG 763
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMAGFSAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 414
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 347 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 406
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 407 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 466
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 467 DE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|225680312|gb|EEH18596.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
Length = 1027
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 235/648 (36%), Positives = 335/648 (51%), Gaps = 63/648 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGAT-DLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH S + +K L +P+ L L G T ++ A+IWTTTPW+LPAN
Sbjct: 214 TALAEAELEYREDHKSIAALVKFPLTSIPSKLRDMLPGDTPEISAVIWTTTPWTLPANAA 273
Query: 474 IAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFP--GQYLQDITYIH 528
IA +P LEYSV VK N +++ +E L+ Q V P G L
Sbjct: 274 IAVSPTLEYSV--VKSENHGYLLIGSLRLEYLQTLLQEGEIAVVGSPLLGYELGSQATYR 331
Query: 529 PINKEQR-DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
P+ K++ ++ A FV++ G+GLVHCAP HG +D+ + LA I + ++G ++
Sbjct: 332 PLFKDESVSQPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLAHGIAAHAPVNDEGLFTD 391
Query: 588 DAGPG----LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQ 641
+A P L G +LG+G VL VE +L Y+H YPYDWRTK PVI++A++Q
Sbjct: 392 EAIPSNPSLLSGKPVLGEGYKDVLKYVENKGQLLAKHIYEHKYPYDWRTKLPVIVRATKQ 451
Query: 642 WFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
WF D I+ +AL L++V F+P + + L + R WCISRQR WGVPIP Y +T
Sbjct: 452 WFADVGDIRHDALRALKDVQFIPATGRSRLESFVKNRSEWCISRQRAWGVPIPALYHRET 511
Query: 702 --IIVNEANIKHFCTLIDEHGPDFWWSLS------VEQLLNTSDVNSNVTKSNDILDIWF 753
I+ E ++ H +IDE G D WW+ + L S + + D +D+WF
Sbjct: 512 GEAILTEKSVSHIMKVIDERGIDSWWTDDENDPAWIPSSLRGSS-GAGYKRGTDTMDVWF 570
Query: 754 DSGISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT---------APFR 799
DSG SW+ V + A VY+EG DQ GWF SSLLT +A APF+
Sbjct: 571 DSGSSWTQVKTPASAEGYAADVYLEGTDQHRGWFQSSLLTYIAQNIALGKPSSLLRAPFK 630
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+ HGF +D+ KMSKS+GNVI + I G P K + QG K+ P
Sbjct: 631 TLITHGFTLDKNSRKMSKSIGNVIHPNQIIDGTLLPPLKLKKI----------QGRKEKP 680
Query: 860 ------AYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS 912
G D LR WVA+ +KD + IG+ +L + + K R + R LLG L +
Sbjct: 681 KGPIYDTLGPDSLRLWVASSDYTKD--IIIGEPVLKAVNTSLHKYRMTFRLLLGSLQDFD 738
Query: 913 ESTG---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLV 969
+ +D L +L N Y F++ +A + + E SAFY +
Sbjct: 739 PKSAIPYESLHIIDKIALLQLRNLVNKCQDAYLNFEFYKAVTAINKWANLEFSAFYIESL 798
Query: 970 KDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
KDRLY DS+N +R + TL +I++ + P++P L EE + H P
Sbjct: 799 KDRLYADSVNSLSRRAAQTTLCHIYYHFQGILGPVVPLLVEESWEHTP 846
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/426 (42%), Positives = 245/426 (57%), Gaps = 37/426 (8%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQR + F+LHDGPPYANG H+GHA+NKILKDI R L GKR+ YV GW
Sbjct: 42 DLYTWQRRQRPIENRFVLHDGPPYANGDLHVGHALNKILKDIVCRVQLAAGKRIDYVSGW 101
Query: 66 DCHGLPIELKAIT------------------SKDKLLSPLDIRKKAKNFALETINTQKAE 107
DCHGLPIELKA+ + + L IR A+ A +T+ Q
Sbjct: 102 DCHGLPIELKALELQAQRDTGKVQSSGNEKGNANGNLGAATIRNAARQLAEKTVVEQMKG 161
Query: 108 FESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESE 167
F W V+ADW +N + T DK + K QL F + ++ I R KPVYWSPSSRTALAE+E
Sbjct: 162 FRQWAVMADW-NNSWKTMDKNFEKQQLDVFLKMVEKGLINRRFKPVYWSPSSRTALAEAE 220
Query: 168 LEYKPDHVSKSIYLKIKLNQVPAHL---LEGAT-DLHALIWTTTPWSLPANQFIAFNPAL 223
LEY+ DH S + +K L +P+ L L G T ++ A+IWTTTPW+LPAN IA +P L
Sbjct: 221 LEYREDHKSIAALVKFPLTSIPSKLRDMLPGDTPEISAVIWTTTPWTLPANAAIAVSPTL 280
Query: 224 EYSVASVKGAN---VIVAKCLVESLKWTFQTDIEVVCDFP--GQYLQDITYIHPINKEQR 278
EYSV VK N +++ +E L+ Q V P G L P+ K++
Sbjct: 281 EYSV--VKSENHGYLLIGSLRLEYLQTLLQEGEIAVVGSPLLGYELGSQATYRPLFKDES 338
Query: 279 -DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-- 335
++ A FV++ G+GLVHCAP HG +D+ + LA I + ++G ++ +A P
Sbjct: 339 VSQPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLAHGIAAHAPVNDEGLFTDEAIPSNP 398
Query: 336 --LEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
L G +LG+G VL VE +L Y+H YPYDWRTK PVI++A++QWF D
Sbjct: 399 SLLSGKPVLGEGYKDVLKYVENKGQLLAKHIYEHKYPYDWRTKLPVIVRATKQWFADVGD 458
Query: 392 IKPEAL 397
I+ +AL
Sbjct: 459 IRHDAL 464
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKK 1162
+ ++G ++ +A P L G +LGEG VL VE +L Y+H YPYDWRTK
Sbjct: 383 VNDEGLFTDEAIPSNPSLLSGKPVLGEGYKDVLKYVENKGQLLAKHIYEHKYPYDWRTKL 442
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ +AL L+ V F+P + + L + R WCISRQR WGVP
Sbjct: 443 PVIVRATKQWFADVGDIRHDALRALKDVQFIPATGRSRLESFVKNRSEWCISRQRAWGVP 502
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y +T I+ E ++ H +IDE G D WW+
Sbjct: 503 IPALYHRETGEAILTEKSVSHIMKVIDERGIDSWWT 538
>gi|409073819|gb|EKM74301.1| hypothetical protein AGABI1DRAFT_80972 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1029
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 243/689 (35%), Positives = 346/689 (50%), Gaps = 94/689 (13%)
Query: 403 GNILGRVGITHDRPGT--ALAESELEYKPDHISKSIYLKIKL--NQVPAHLLE------G 452
G I R H P + ALAE+EL YK DH+S S+++ L N L+ G
Sbjct: 212 GLICRRYRPVHFSPSSRSALAEAELIYKDDHVSHSVFVNFDLDKNNTKNEKLQALFASVG 271
Query: 453 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDID 511
+ L+WTTTPW+L AN IA +P LEY V S VIV+K +E L +
Sbjct: 272 NEPVKVLVWTTTPWTLTANMGIAVHPDLEYVVTRSAANEVVIVSKERLEALAEILGEGTE 331
Query: 512 VVCDFPGQYLQDITYIHPINKE---QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF--- 565
VV + G L Y HPI Q K++PA V+S GTGLVHCAPAHG +D+
Sbjct: 332 VVAELTGSDLVGAVY-HPIFSSLTAQASFKVVPASHVTSDSGTGLVHCAPAHGAEDYHAF 390
Query: 566 --LLALAEKIPVLNLITNQGKYSPD--------AGPGLEGLNILGDGKDQVLHLVEP--D 613
L L+ ++ + +GK+S D A +EG +LGDG ++++++
Sbjct: 391 HSLDLLSNPDDMICHVDGEGKFSHDVANVLGFEAAKDVEGKEVLGDGSKAIVNILKRLNR 450
Query: 614 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRD 673
++ + +H YPYDW+T KP+I+ A+ QWF + + IK AL L V+F P ++ L
Sbjct: 451 LVKIKRIKHRYPYDWKTDKPIIVTATSQWFANLDEIKDNALEALHRVSFYPPQSRNRLES 510
Query: 674 QIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ 731
I R WCISRQRVWGVPIP + DT ++ ++H ++++E G +WW+ VE
Sbjct: 511 FIRARSEWCISRQRVWGVPIPSLHHIPTDTAYLDNMTLEHILSVLEEKGVAYWWTGPVEA 570
Query: 732 LLNTSDVNSNVT----------KSNDILDIWFDSGISWSHVL-------KDKPAHVYMEG 774
+ S + S T K D +D+WFDSG SWS + ++ A V +EG
Sbjct: 571 FIPLSLLTSTATNQDEARKMWKKGTDTMDVWFDSGTSWSMLQNLDGEKHREFLADVCLEG 630
Query: 775 MDQINGWFMSSLLTSVA------LKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDI 828
DQ GWF S LLT V ++P+R++ HG V+DE G KMSKS+GN++S I
Sbjct: 631 SDQHRGWFQSQLLTKVGSHSDTLTTPSSPYRDLITHGMVLDESGKKMSKSLGNIVSPMTI 690
Query: 829 TQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTVPIGKNIL 887
G K KK PAYG DVLR WVA +D + IG IL
Sbjct: 691 IHGGKD--------------------KKKDPAYGADVLRLWVATVEYWRD--MAIGPKIL 728
Query: 888 NSSQDDVQKIRSSLRYLLGVLHNHS----------ESTGSISRYVDVYMLKRLCEFQNTM 937
+ + + ++KIR+S R+LLG + + + E G RYV + L Q T
Sbjct: 729 SQAAETMRKIRNSTRFLLGNISDGAALTDFDRVPREQLGLAERYV----MHELYTLQQTA 784
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y + + + L +F LS+ YF + KD LY +S N R + + L I +
Sbjct: 785 FEGYATYNFPKVMSALGHFANITLSSLYFDITKDCLYANSTNSFERRAVVTVLEQISETM 844
Query: 998 LRTVAPIMPHLAEEVYS--HLPSRQGTFS 1024
API+PHLAEEV++ H S+ F+
Sbjct: 845 TAVYAPILPHLAEEVHAIRHPESKSSFFA 873
Score = 323 bits (827), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 186/424 (43%), Positives = 253/424 (59%), Gaps = 33/424 (7%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ E GKP F+LHDGPPYANG H+GHA+NKILKDI +RS L+ GKRV+Y+PGW
Sbjct: 69 DLYRWQWEQRRGKPSFVLHDGPPYANGDLHMGHALNKILKDIIVRSQLMLGKRVNYLPGW 128
Query: 66 DCHGLPIELKAIT--SKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN-- 120
DCHGLPIE KA+ KD + + P IR+ A AL I++QK++F S+GV+ADW N
Sbjct: 129 DCHGLPIENKALQELGKDSRSVDPTTIREAANTTALREISSQKSQFWSFGVMADWGSNEA 188
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T D Y QL F + ++ I R +PV++SPSSR+ALAE+EL YK DHVS S++
Sbjct: 189 TYRTLDHNYEMRQLRIFRKMVEKGLICRRYRPVHFSPSSRSALAEAELIYKDDHVSHSVF 248
Query: 181 LKIKL--NQVPAHLLE------GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVK 231
+ L N L+ G + L+WTTTPW+L AN IA +P LEY V S
Sbjct: 249 VNFDLDKNNTKNEKLQALFASVGNEPVKVLVWTTTPWTLTANMGIAVHPDLEYVVTRSAA 308
Query: 232 GANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE---QRDLKLLPAGFV 288
VIV+K +E+L EVV + G L Y HPI Q K++PA V
Sbjct: 309 NEVVIVSKERLEALAEILGEGTEVVAELTGSDLVGAVY-HPIFSSLTAQASFKVVPASHV 367
Query: 289 SSSKGTGLVHCAPAHGQDDF-----LLALAEKIPVLNLITNQGKYSPD--------AGPG 335
+S GTGLVHCAPAHG +D+ L L+ ++ + +GK+S D A
Sbjct: 368 TSDSGTGLVHCAPAHGAEDYHAFHSLDLLSNPDDMICHVDGEGKFSHDVANVLGFEAAKD 427
Query: 336 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 393
+EG +LGDG ++++++ ++ + +H YPYDW+T KP+I+ A+ QWF + + IK
Sbjct: 428 VEGKEVLGDGSKAIVNILKRLNRLVKIKRIKHRYPYDWKTDKPIIVTATSQWFANLDEIK 487
Query: 394 PEAL 397
AL
Sbjct: 488 DNAL 491
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 42/261 (16%)
Query: 1053 ARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV------YSHLPSRQGTFSSFC-------H 1099
A L+G + ++H PI L + SH+ S GT C
Sbjct: 334 AELTGSDLVGAVYH-------PIFSSLTAQASFKVVPASHVTSDSGTGLVHCAPAHGAED 386
Query: 1100 FKVYHHLNLITN----------QGKYSPD--------AGPGLEGLNILGEGKDQVLHLVE 1141
+ +H L+L++N +GK+S D A +EG +LG+G ++++++
Sbjct: 387 YHAFHSLDLLSNPDDMICHVDGEGKFSHDVANVLGFEAAKDVEGKEVLGDGSKAIVNILK 446
Query: 1142 P--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKK 1199
++ + +H YPYDW+T KP+I+ A+ QWF + + IK AL L V+F P ++
Sbjct: 447 RLNRLVKIKRIKHRYPYDWKTDKPIIVTATSQWFANLDEIKDNALEALHRVSFYPPQSRN 506
Query: 1200 SLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSL 1257
L I R WCISRQRVWGVPIP + DT ++ ++H ++++E G +WW+
Sbjct: 507 RLESFIRARSEWCISRQRVWGVPIPSLHHIPTDTAYLDNMTLEHILSVLEEKGVAYWWTG 566
Query: 1258 PVEQLLNTSDVNSNVTKSNQG 1278
PVE + S + S T ++
Sbjct: 567 PVEAFIPLSLLTSTATNQDEA 587
>gi|228954172|ref|ZP_04116200.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229081148|ref|ZP_04213658.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
gi|423426030|ref|ZP_17403061.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
gi|423437348|ref|ZP_17414329.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
gi|423503428|ref|ZP_17480020.1| isoleucyl-tRNA synthetase [Bacillus cereus HD73]
gi|449090837|ref|YP_007423278.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|228702192|gb|EEL54668.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
gi|228805492|gb|EEM52083.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|401110777|gb|EJQ18676.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
gi|401120503|gb|EJQ28299.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
gi|402459649|gb|EJV91386.1| isoleucyl-tRNA synthetase [Bacillus cereus HD73]
gi|449024594|gb|AGE79757.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 921
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|229162831|ref|ZP_04290788.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
gi|228620713|gb|EEK77582.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
Length = 913
Score = 363 bits (931), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 183 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 238
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 239 PELEYSIVKVNDEKYIIASELFETVVKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 296
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 297 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 355
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 356 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 415
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 416 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 474
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 475 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 534
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 535 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 594
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 595 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 624
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 625 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 684
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 685 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTK 744
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 745 LVTPILPHTADEVWPYVPG 763
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 28 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 87
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 88 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 145
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 146 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 204
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 205 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 261
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 262 TVVKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 319
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 320 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 378
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 414
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 347 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 406
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 407 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 466
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 467 DE-TINHVADLFREHGSNVWFEREAKDLL 494
>gi|257125155|ref|YP_003163269.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257049094|gb|ACV38278.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 930
Score = 363 bits (931), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 213/622 (34%), Positives = 328/622 (52%), Gaps = 58/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EYK D S SIY+K + Q L G + LIWTTTPW+LPAN + +
Sbjct: 200 TALAEAEIEYK-DVESHSIYVKFEGTQDLLDKL-GVEEASILIWTTTPWTLPANLGVFLH 257
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P +Y + + N++VAK L E + T +++ +F G L+ Y HP R+
Sbjct: 258 PEFDYGLYKTEKGNIVVAKELAETVFKTLGISYELLKEFKGTELEKTHYRHPFL--DREG 315
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ +V+ GTG VH AP HG DD+ + ++ VL+ + ++G + +AG EG+
Sbjct: 316 LVMLGDYVTVDAGTGAVHSAPGHGADDYNYSRKYELGVLSPVDDRGHMTKEAGK-YEGMF 374
Query: 598 ILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 654
V L E +L + HSYP+DWR+KKPVI +A++QWFI D I+ A+
Sbjct: 375 YAKASNVIVQDLTESGHLLHHSKFVHSYPHDWRSKKPVIFRATEQWFISVDESDIRENAI 434
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHF 712
L++V FVP K + + RP W ISRQRVWGVPIP+FY+ D +I +
Sbjct: 435 KALDDVEFVPSWGKNRIGSMLETRPDWTISRQRVWGVPIPLFYNRATDEVIYEPEIMDRV 494
Query: 713 CTLIDEHGPDFWWSLSVEQLL--------NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
++ + G D WW ++++ N DV+ + K I+D+WFDSG+S VL
Sbjct: 495 IEMVKKEGTDIWWKYEAKEIIGDELLEKYNLKDVD--IRKERSIMDVWFDSGVSHRSVLV 552
Query: 765 DK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSLLTS+A AP++ + HGF +D +G KMSKS+G
Sbjct: 553 PRNLPRPADLYLEGSDQHRGWFQSSLLTSIASTKDAPYKRILTHGFTMDGQGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N I DIT+ YG D+LR WV++ ++ V
Sbjct: 613 NTILPKDITE-----------------------------KYGADILRLWVSSVDYRE-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNT 936
I +NIL D ++IR++ R+L+G L++ + + +D + + +L E +
Sbjct: 643 RISENILQQMSDAYRRIRNTARFLMGNLNDFDYANDKVDYNDMFEIDKWAMHKLEELKAK 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y ++++ + + F E+S+FY +VKDRLYC+ R S L + V
Sbjct: 703 TTEFYDKYEFYSLFQEITYFCSMEMSSFYLDIVKDRLYCEGTTSIERRSTQTVLTEVLKV 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L+R +AP++ A+E++ +P
Sbjct: 763 LVRIIAPVLSFTADEIWERIPE 784
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 244/425 (57%), Gaps = 15/425 (3%)
Query: 10 WQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+++ G P F+LHDGPPYANG HIGHA+NKILKDI L+ L+G Y+PGWD HG
Sbjct: 47 YEKSLNEGAPFFVLHDGPPYANGDIHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHG 106
Query: 70 LPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFD 126
LPIE ++ + K K ++PL IR++ K +AL+ + QK F+ G+L +W+ N Y T
Sbjct: 107 LPIEWKIMEELGEKAKNMTPLQIRQECKKYALKWVEKQKEGFKRLGILGNWD-NPYITLR 165
Query: 127 KEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN 186
EY QL F +Y+ Y+Y+ LKPVYWSP++ TALAE+E+EYK D S SIY+K +
Sbjct: 166 PEYEAEQLKVFKEIYENGYVYKGLKPVYWSPTTETALAEAEIEYK-DVESHSIYVKFEGT 224
Query: 187 QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
Q L G + LIWTTTPW+LPAN + +P +Y + + N++VAK L E++
Sbjct: 225 QDLLDKL-GVEEASILIWTTTPWTLPANLGVFLHPEFDYGLYKTEKGNIVVAKELAETVF 283
Query: 247 WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
T E++ +F G L+ Y HP R+ ++ +V+ GTG VH AP HG D
Sbjct: 284 KTLGISYELLKEFKGTELEKTHYRHPFL--DREGLVMLGDYVTVDAGTGAVHSAPGHGAD 341
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQH 365
D+ + ++ VL+ + ++G + +AG EG+ V L E +L + H
Sbjct: 342 DYNYSRKYELGVLSPVDDRGHMTKEAGK-YEGMFYAKASNVIVQDLTESGHLLHHSKFVH 400
Query: 366 SYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRPGTALAESEL 425
SYP+DWR+KKPVI +A++QWFI + K + ++ +R G S L
Sbjct: 401 SYPHDWRSKKPVIFRATEQWFISVDESDIRENAIKALDDVEFVPSWGKNRIG-----SML 455
Query: 426 EYKPD 430
E +PD
Sbjct: 456 ETRPD 460
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 6/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPV 1164
L+ + ++G + +AG EG+ V L E +L + HSYP+DWR+KKPV
Sbjct: 354 LSPVDDRGHMTKEAGK-YEGMFYAKASNVIVQDLTESGHLLHHSKFVHSYPHDWRSKKPV 412
Query: 1165 ILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
I +A++QWFI D I+ A+ L+ V FVP K + + RP W ISRQRVWGVP
Sbjct: 413 IFRATEQWFISVDESDIRENAIKALDDVEFVPSWGKNRIGSMLETRPDWTISRQRVWGVP 472
Query: 1223 IPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IP+FY+ D +I + ++ + G D WW ++++
Sbjct: 473 IPLFYNRATDEVIYEPEIMDRVIEMVKKEGTDIWWKYEAKEII 515
>gi|229192065|ref|ZP_04319034.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|228591391|gb|EEK49241.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
Length = 921
Score = 363 bits (931), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--NRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMSGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--NRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|229104459|ref|ZP_04235126.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
gi|228678901|gb|EEL33111.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
Length = 921
Score = 362 bits (930), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP +RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN+I
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNII 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYVPG 771
Score = 283 bits (725), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP +RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--ERDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|394993880|ref|ZP_10386619.1| isoleucyl-tRNA synthetase [Bacillus sp. 916]
gi|393805204|gb|EJD66584.1| isoleucyl-tRNA synthetase [Bacillus sp. 916]
Length = 921
Score = 362 bits (930), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 334/618 (54%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ K+ L G + +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFKVKDGKGVLENGES---FIIWTTTPWTMPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWT--FQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P LEY+V V +VA L+EN+ F+ + +VV + G+ L+ IT HP+ R
Sbjct: 248 PDLEYNVIKVGDKRYVVAAELIENVAEACGFE-NPEVVASYKGRELEYITAEHPLYG--R 304
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ V++ GTG VH AP HG+DDF++ + VL + +G + D PG EG
Sbjct: 305 DSLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEG 363
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 364 MFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ II +E I+H
Sbjct: 424 DAIKQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIITDET-IEHV 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD-- 765
L +HG + W+ + LL + N TK DI+D+WFDSG S VL++
Sbjct: 483 SELFKQHGSNVWFEREAKDLLPEGFTHPGSPNGIFTKEQDIMDVWFDSGSSHQAVLEERD 542
Query: 766 ---KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D G KMSKS+GN
Sbjct: 543 DLVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDANGRKMSKSLGNT 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I D T+ AK+L G ++LR WV++ + P+
Sbjct: 603 I---DPTKIAKQL--------------------------GAEILRLWVSS-VNYQADHPV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
++IL + +K+R++ R+L G L + + S ++ R VD YML +L + + +
Sbjct: 633 SEDILKQVAEVYRKVRNTFRFLHGNLFDFNPSVNAVDVKDLREVDQYMLIKLNKLIDKVK 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y E+++A + NF ELS+FY KD +Y + + R S + L+
Sbjct: 693 KAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALV 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ API+PH A+E++SHL
Sbjct: 753 KLTAPILPHTADEMWSHL 770
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 228/398 (57%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S D RK +++A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVADFRKLCEDYAWQQIERQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L G + +IWTTTPW++PAN I+ +P LEY+V V +VA L+
Sbjct: 213 FKVKDGKGVLENGES---FIIWTTTPWTMPANLGISVHPDLEYNVIKVGDKRYVVAAELI 269
Query: 243 ESLKWT--FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
E++ F+ + EVV + G+ L+ IT HP+ RD ++ V++ GTG VH A
Sbjct: 270 ENVAEACGFE-NPEVVASYKGRELEYITAEHPLYG--RDSLVMLGDHVTTDAGTGCVHTA 326
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDF++ + VL + +G + D PG EG+ K L E L
Sbjct: 327 PGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEGMFYDKANKPITEKLEENGALLK 385
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 386 LEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
D PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF
Sbjct: 356 DEAPGFEGMFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASI 415
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + + L ++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ II
Sbjct: 416 KDFRSDLLDAIKQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIIT 475
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L +HG + W+ + LL
Sbjct: 476 DET-IEHVSELFKQHGSNVWFEREAKDLL 503
>gi|401884471|gb|EJT48630.1| isoleucyl-tRNA synthetase [Trichosporon asahii var. asahii CBS 2479]
gi|406694070|gb|EKC97406.1| isoleucyl-tRNA synthetase [Trichosporon asahii var. asahii CBS 8904]
Length = 895
Score = 362 bits (930), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 242/683 (35%), Positives = 344/683 (50%), Gaps = 87/683 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKI---------KLNQVPAHLLEGATD--LHALIWTTTPW 466
TALAE+ELEY D S S+Y+ +L Q A E A D LH IWTTTPW
Sbjct: 176 TALAEAELEYA-DLKSTSVYVAFPVEDGDASPRLEQALAKGRETAPDAKLHLAIWTTTPW 234
Query: 467 SLPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITY 526
SLP N + V + KG ++VA+ +E LK ++ +V G L Y
Sbjct: 235 SLPGNMYAV--------VLNEKGQLLVVAEERIEELKKHLG-ELTIVDRLTGADLVGTNY 285
Query: 527 ---IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNL---IT 580
HP + E + A +V++ GTGLVH APAHG DD+ LA + + L I
Sbjct: 286 THVFHPASAEGPRPTVFSAPYVTADSGTGLVHSAPAHGHDDYDAFLAAGLSLEELRCPID 345
Query: 581 NQGKYSPD----AGPGLE---GLNILGDGKDQVLHLVE-----PDVLWTENYQHSYPYDW 628
+ GK++ + AGP E G ++G +VE +L TE H YP DW
Sbjct: 346 DDGKFTTELLGWAGPDAESLVGQVVVGKKSRGSRAMVEFIAGRGALLATEKITHRYPCDW 405
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
RTK+P++++A+ QWF D E +K +A A +E + FVP + L + R WCISRQR
Sbjct: 406 RTKEPIMVRATPQWFADVESLKGDAEAAIENIGFVPPIGRNRLSAMVQSRSEWCISRQRS 465
Query: 689 WGVPIPVFYDGDTI-IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSND 747
WGVPI + + ++ E ++ H +++ E G D+WW+ VE + S ++K D
Sbjct: 466 WGVPILALFTAEGAPVLTEESLAHIISVLSEKGVDYWWAGPVEDFVPPSMKGQQLSKGFD 525
Query: 748 ILDIWFDSGISWSHVLKDKP--------AHVYMEGMDQINGWFMSSLLTSVA-----LKH 794
LD+WFDSG SWS +LKD A VY+EG DQ GWF SS+LT +A K
Sbjct: 526 TLDVWFDSGTSWS-LLKDAKLRDPSEPLADVYLEGSDQHRGWFQSSILTRLADLQGEGKP 584
Query: 795 TAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQG 854
AP+R + HGF DE G KMSKS+GN IS DI +G +QG
Sbjct: 585 AAPYRTLITHGFTTDEAGNKMSKSLGNGISPMDIVKG--------------------SQG 624
Query: 855 AKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSES 914
P YG D LR W AA IG N ++ + + ++K+RS+LR+++G + N
Sbjct: 625 K---PTYGSDTLRVW-AAGVDYTRDCSIGPNSISMASELLRKLRSALRFMVGNVANTETK 680
Query: 915 TGSIS------RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTL 968
+ +D Y+L L + + T Y E+ + + + F + LS+ YF +
Sbjct: 681 ETPLPLDQVTLSPMDEYVLAELEQLERTAREAYDEYTFNKVLQAASTFASSTLSSLYFDV 740
Query: 969 VKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF-- 1026
VKD LYCD+ + R + + T+ ++ +VL++ VAPI PHLAEEV+ L F S
Sbjct: 741 VKDTLYCDAPSSPQRQAIIATMQHVLNVLVKVVAPITPHLAEEVWEALGRTGSVFMSHWE 800
Query: 1027 -CHFKVYLQYSGSIAKRILYCDS 1048
+ QYSG K +L S
Sbjct: 801 SGSAERSPQYSGEAMKPLLALRS 823
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 189/383 (49%), Gaps = 80/383 (20%)
Query: 43 ILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETIN 102
ILKD+ R N+++G++VHYVPGWDCHGLPIE KA+ +
Sbjct: 99 ILKDMINRYNVIRGRKVHYVPGWDCHGLPIEHKALAA----------------------- 135
Query: 103 TQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTA 162
G+ AD H F+ QL F + K+ +I +P Y+SPSSRTA
Sbjct: 136 --------LGLTAD------HGFEI----RQLRLFQQMVKKGFITHRHRPTYYSPSSRTA 177
Query: 163 LAESELEYKPDHVSKSIYLKI---------KLNQVPAHLLEGATD--LHALIWTTTPWSL 211
LAE+ELEY D S S+Y+ +L Q A E A D LH IWTTTPWSL
Sbjct: 178 LAEAELEYA-DLKSTSVYVAFPVEDGDASPRLEQALAKGRETAPDAKLHLAIWTTTPWSL 236
Query: 212 PANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITY-- 269
P N + V + KG ++VA+ +E LK ++ +V G L Y
Sbjct: 237 PGNMYAV--------VLNEKGQLLVVAEERIEELKKHLG-ELTIVDRLTGADLVGTNYTH 287
Query: 270 -IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNL---ITNQ 325
HP + E + A +V++ GTGLVH APAHG DD+ LA + + L I +
Sbjct: 288 VFHPASAEGPRPTVFSAPYVTADSGTGLVHSAPAHGHDDYDAFLAAGLSLEELRCPIDDD 347
Query: 326 GKYSPD----AGPGLE---GLNILGDGKDQVLHLVE-----PDVLWTENYQHSYPYDWRT 373
GK++ + AGP E G ++G +VE +L TE H YP DWRT
Sbjct: 348 GKFTTELLGWAGPDAESLVGQVVVGKKSRGSRAMVEFIAGRGALLATEKITHRYPCDWRT 407
Query: 374 KKPVILKASQQWFIDTERIKPEA 396
K+P++++A+ QWF D E +K +A
Sbjct: 408 KEPIMVRATPQWFADVESLKGDA 430
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 13/179 (7%)
Query: 1109 ITNQGKYSPD----AGPGLE---GLNILGEGKDQVLHLVE-----PDVLWTENYQHSYPY 1156
I + GK++ + AGP E G ++G+ +VE +L TE H YP
Sbjct: 344 IDDDGKFTTELLGWAGPDAESLVGQVVVGKKSRGSRAMVEFIAGRGALLATEKITHRYPC 403
Query: 1157 DWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQ 1216
DWRTK+P++++A+ QWF D E +K +A A +E + FVP + L + R WCISRQ
Sbjct: 404 DWRTKEPIMVRATPQWFADVESLKGDAEAAIENIGFVPPIGRNRLSAMVQSRSEWCISRQ 463
Query: 1217 RVWGVPIPVFYDGDTI-IVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
R WGVPI + + ++ E ++ H +++ E G D+WW+ PVE + S ++K
Sbjct: 464 RSWGVPILALFTAEGAPVLTEESLAHIISVLSEKGVDYWWAGPVEDFVPPSMKGQQLSK 522
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 1022 TFSSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAE 1081
TF+S +Y + K LYCD+ + R + + T+ ++ +VL++ VAPI PHLAE
Sbjct: 727 TFASSTLSSLYFD----VVKDTLYCDAPSSPQRQAIIATMQHVLNVLVKVVAPITPHLAE 782
Query: 1082 EVYSHLPSRQGTFSS 1096
EV+ L F S
Sbjct: 783 EVWEALGRTGSVFMS 797
>gi|212639638|ref|YP_002316158.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|212561118|gb|ACJ34173.1| Isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 918
Score = 362 bits (930), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 228/618 (36%), Positives = 331/618 (53%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +L+G D +IWTTTPW++PAN IA +
Sbjct: 192 SALAEAEIEYK-DKRSPSIYVAFPVKDGKG-VLDG--DEKIVIWTTTPWTIPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+YSV G +VA L+++++ + + V+ G L+ + HP RD
Sbjct: 248 PQLQYSVVEADGGKYVVASELLQSVQKEIGWEHVTVLKTVKGSELEYVVAKHPFY--DRD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G Y + PG G+
Sbjct: 306 SLVICGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLGVLCPVDERG-YMTEEAPGFSGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTK+P I +A+ QWF ++I+ + L
Sbjct: 365 FYDDANKAITEKLQEVGALLKLSFITHSYPHDWRTKQPTIFRATAQWFASIDKIREQLLK 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + + + I R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AVEETKWVPAWGEIRIHNMIRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 NLFRQYGSNVWFEREAKDLLPEGFTHPGSPNGRFTKETDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 544 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WVA+ V I
Sbjct: 604 -----------VPA------------------KVMEQLGADILRLWVAS-VDYQADVRIS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
NIL + +KIR++ R++LG L N +E T +I R VD YML +L +
Sbjct: 634 DNILKQVAEVYRKIRNTFRFMLGNLFDFNPAEHTVAIEQLREVDRYMLIKLNRLIEKVKQ 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +++A + NF +LSAFYF KD LY ++ N R S L+ L +
Sbjct: 694 AYETYEFATIYHEVNNFCTVDLSAFYFDFSKDVLYIEAANNHERRSIQTVLYETLVALTK 753
Query: 1000 TVAPIMPHLAEEVYSHLP 1017
VAPI+PH A+EV+S++P
Sbjct: 754 LVAPILPHTADEVWSYIP 771
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 226/400 (56%), Gaps = 19/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRKVQERTKDRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYCAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A E I+ Q+ +F+ GV DW+ N Y
Sbjct: 95 DTHGLPIETALTKNKGVNRKEMSVAEFRKLCEQYAYEQIDRQREQFKRLGVRGDWD-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 ITLTPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ +L+G D +IWTTTPW++PAN IA +P L+YSV G +VA L+
Sbjct: 213 FPVKDGKG-VLDG--DEKIVIWTTTPWTIPANLGIAVHPQLQYSVVEADGGKYVVASELL 269
Query: 243 ESLK----WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
+S++ W T ++ V G L+ + HP RD ++ V++ GTG VH
Sbjct: 270 QSVQKEIGWEHVTVLKTV---KGSELEYVVAKHPFY--DRDSLVICGEHVTTDAGTGCVH 324
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DDF++ + VL + +G Y + PG G+ K L E L
Sbjct: 325 TAPGHGEDDFIVGQKYGLGVLCPVDERG-YMTEEAPGFSGMFYDDANKAITEKLQEVGAL 383
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTK+P I +A+ QWF ++I+ + L
Sbjct: 384 LKLSFITHSYPHDWRTKQPTIFRATAQWFASIDKIREQLL 423
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 1111 NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKAS 1169
++ Y + PG G+ K L E L ++ HSYP+DWRTK+P I +A+
Sbjct: 349 DERGYMTEEAPGFSGMFYDDANKAITEKLQEVGALLKLSFITHSYPHDWRTKQPTIFRAT 408
Query: 1170 QQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-- 1227
QWF ++I+ + L +E +VP + + + I R WCISRQR WGVPIPVFY
Sbjct: 409 AQWFASIDKIREQLLKAVEETKWVPAWGEIRIHNMIRDRGDWCISRQRAWGVPIPVFYAE 468
Query: 1228 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 469 NGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 503
>gi|229086460|ref|ZP_04218632.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
gi|228696777|gb|EEL49590.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
Length = 921
Score = 362 bits (930), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 326/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L + + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVEVNDEKYIIASELFDTVSKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFLVGKQYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L E+G + W+ + LL + S N K DI+D+WFDSG S VL++
Sbjct: 483 NLFRENGSNVWFEREAKDLLPEGFTHPSSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY ++ N R + L+++ L +
Sbjct: 693 SYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEAENNHDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E +N Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L +
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVEVNDEKYIIASELFD 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVSKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFLVGKQYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L +E +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L E+G + W+ + LL
Sbjct: 475 DE-TISHVANLFRENGSNVWFEREAKDLL 502
>gi|423518587|ref|ZP_17495068.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|401160795|gb|EJQ68170.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-4]
Length = 921
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 332/643 (51%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L N SE+T +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + + R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
V PI+PH A+EV+ ++P + + + GS A R
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEATEVEGSEALR 795
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|375362187|ref|YP_005130226.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451347087|ref|YP_007445718.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens IT-45]
gi|371568181|emb|CCF05031.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449850845|gb|AGF27837.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens IT-45]
Length = 921
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 333/618 (53%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ K+ L G + +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFKVKDGKGVLENGES---FIIWTTTPWTMPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWT--FQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P LEY+V V +VA L+EN+ F+ + +VV + G+ L+ IT HP+ R
Sbjct: 248 PDLEYNVIKVGDKRYVVAAELIENVAEACGFE-NPEVVASYKGRELEYITAEHPLYG--R 304
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ V++ GTG VH AP HG+DDF++ + VL + +G + D PG EG
Sbjct: 305 DSLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEG 363
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 364 MFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ II +E I+H
Sbjct: 424 DAIKQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIITDET-IEHV 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD-- 765
L +HG + W+ + LL + N TK DI+D+WFDSG S VL++
Sbjct: 483 SELFKQHGSNVWFEREAKDLLPEGFTHPGSPNGIFTKEQDIMDVWFDSGSSHQAVLEERD 542
Query: 766 ---KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D G KMSKS+GN
Sbjct: 543 DLVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDANGRKMSKSLGNT 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I D T+ AK+L G ++LR WV++ + P+
Sbjct: 603 I---DPTKIAKQL--------------------------GAEILRLWVSS-VNYQADHPV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
++IL + +K+R++ R+L G L + S ++ R VD YML +L + + +
Sbjct: 633 SEDILKQVAEVYRKVRNTFRFLHGNLFDFDPSINAVDVKDLREVDQYMLIKLNKLIDKVK 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y E+++A + NF ELS+FY KD +Y + + R S + L+
Sbjct: 693 KAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALV 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ API+PH A+E++SHL
Sbjct: 753 KLTAPILPHTADEMWSHL 770
Score = 283 bits (723), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 228/398 (57%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S D RK +++A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVADFRKLCEDYAWQQIERQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L G + +IWTTTPW++PAN I+ +P LEY+V V +VA L+
Sbjct: 213 FKVKDGKGVLENGES---FIIWTTTPWTMPANLGISVHPDLEYNVIKVGDKRYVVAAELI 269
Query: 243 ESLKWT--FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
E++ F+ + EVV + G+ L+ IT HP+ RD ++ V++ GTG VH A
Sbjct: 270 ENVAEACGFE-NPEVVASYKGRELEYITAEHPLYG--RDSLVMLGDHVTTDAGTGCVHTA 326
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDF++ + VL + +G + D PG EG+ K L E L
Sbjct: 327 PGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEGMFYDKANKPITEKLEENGALLK 385
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 386 LEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
D PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF
Sbjct: 356 DEAPGFEGMFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASI 415
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + + L ++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ II
Sbjct: 416 KDFRSDLLDAIKQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIIT 475
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L +HG + W+ + LL
Sbjct: 476 DET-IEHVSELFKQHGSNVWFEREAKDLL 503
>gi|385264667|ref|ZP_10042754.1| isoleucyl-tRNA synthetase [Bacillus sp. 5B6]
gi|385149163|gb|EIF13100.1| isoleucyl-tRNA synthetase [Bacillus sp. 5B6]
Length = 923
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 334/618 (54%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ K+ L G + +IWTTTPW++PAN I+ +
Sbjct: 194 SALAEAEIEYQ-DKRSASIYVAFKVKDGKGVLENGES---FIIWTTTPWTMPANLGISVH 249
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWT--FQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P LEY+V V +VA L+EN+ F+ + +VV + G+ L+ IT HP+ R
Sbjct: 250 PDLEYNVIKVGDKRYVVAAELIENVAEACGFE-NPEVVASYKGRELEYITAEHPLYG--R 306
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ V++ GTG VH AP HG+DDF++ + VL + +G + D PG EG
Sbjct: 307 DSLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEG 365
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 366 MFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 425
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ +I +E I+H
Sbjct: 426 DAIKQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPVITDET-IEHV 484
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD-- 765
L +HG + W+ + LL + N TK DI+D+WFDSG S VL++
Sbjct: 485 SELFKQHGSNVWFEREAKDLLPEGFTHPGSPNGIFTKEQDIMDVWFDSGSSHQAVLEERD 544
Query: 766 ---KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D G KMSKS+GN
Sbjct: 545 DLVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDANGRKMSKSLGNT 604
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I D T+ AK+L G ++LR WV++ + P+
Sbjct: 605 I---DPTKIAKQL--------------------------GAEILRLWVSS-VNYQADHPV 634
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
++IL + +K+R++ R+L G L + + S ++ R VD YML +L + + +
Sbjct: 635 SEDILKQVAEVYRKVRNTFRFLHGNLFDFNPSVNAVDVKNLREVDQYMLIKLNKLIDKVK 694
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y E+++A + NF ELS+FY KD +Y + + R S + L+
Sbjct: 695 KAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALV 754
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ API+PH A+E++SHL
Sbjct: 755 KLTAPILPHTADEMWSHL 772
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 228/398 (57%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 37 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 96
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S D RK +++A + I Q+ +F+ GV DWE N Y
Sbjct: 97 DTHGLPIETALTKNKKVNRKEMSVADFRKLCEDYAWQQIERQREQFKRLGVRGDWE-NPY 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 156 VTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 214
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L G + +IWTTTPW++PAN I+ +P LEY+V V +VA L+
Sbjct: 215 FKVKDGKGVLENGES---FIIWTTTPWTMPANLGISVHPDLEYNVIKVGDKRYVVAAELI 271
Query: 243 ESLKWT--FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
E++ F+ + EVV + G+ L+ IT HP+ RD ++ V++ GTG VH A
Sbjct: 272 ENVAEACGFE-NPEVVASYKGRELEYITAEHPLYG--RDSLVMLGDHVTTDAGTGCVHTA 328
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDF++ + VL + +G + D PG EG+ K L E L
Sbjct: 329 PGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEGMFYDKANKPITEKLEENGALLK 387
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 388 LEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 425
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
D PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF
Sbjct: 358 DEAPGFEGMFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASI 417
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + + L ++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ +I
Sbjct: 418 KDFRSDLLDAIKQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPVIT 477
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L +HG + W+ + LL
Sbjct: 478 DET-IEHVSELFKQHGSNVWFEREAKDLL 505
>gi|228966849|ref|ZP_04127893.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228792948|gb|EEM40506.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 805
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|301055386|ref|YP_003793597.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
gi|300377555|gb|ADK06459.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
Length = 921
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFEPVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 279 bits (714), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 229/396 (57%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 PVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTEEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|260891264|ref|ZP_05902527.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
gi|260859291|gb|EEX73791.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
Length = 930
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 329/622 (52%), Gaps = 58/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EYK D S SIY+K + Q L G + LIWTTTPW+LPAN + +
Sbjct: 200 TALAEAEIEYK-DVESHSIYVKFEGTQDLLDKL-GVEEASILIWTTTPWTLPANLGVFLH 257
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P +Y + + N+++AK L E + T +++ +F G L+ Y HP R+
Sbjct: 258 PEFDYGLYKTEKGNLVLAKELAETVFNTLGISYELLKEFKGTELEKTHYRHPFL--DREG 315
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ +V++ GTG VH AP HG DD+ + ++ VL+ + ++G + +AG EG+
Sbjct: 316 LVMLGDYVTADAGTGAVHSAPGHGADDYNYSRKYELGVLSPVDDRGHMTKEAGK-YEGMF 374
Query: 598 ILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 654
V L E +L + HSYP+DWR+KKPVI +A++QWFI D I+ A+
Sbjct: 375 YAKASNVIVQDLTESGHLLHHSKFVHSYPHDWRSKKPVIFRATEQWFISVDESDIRENAI 434
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHF 712
L++V FVP K + + RP W ISRQRVWGVPIP+FY+ D +I +
Sbjct: 435 KALDDVEFVPSWGKNRIGSMLETRPDWTISRQRVWGVPIPLFYNRATDEVIYEPEIMDRV 494
Query: 713 CTLIDEHGPDFWWSLSVEQLL--------NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
++ + G D WW ++++ N DV+ + K I+D+WFDSG+S VL
Sbjct: 495 IEMVKKEGTDIWWKYEAKEIIGDELLEKYNLKDVD--IRKERSIMDVWFDSGVSHRSVLV 552
Query: 765 DK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSLLTS+A AP++ + HGF +D +G KMSKS+G
Sbjct: 553 PRNLPRPADLYLEGSDQHRGWFQSSLLTSIASTKDAPYKRILTHGFTMDGQGRKMSKSLG 612
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N I DIT+ YG D+LR WV++ ++ V
Sbjct: 613 NTILPKDITE-----------------------------KYGADILRLWVSSVDYRE-DV 642
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNT 936
I +NIL D ++IR++ R+L+G L++ + + +D + + +L E +
Sbjct: 643 RISENILQQMSDAYRRIRNTARFLMGNLNDFDYANDKVDYNDMFEIDKWAMHKLEELKAK 702
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y ++++ + + F E+S+FY +VKDRLYC+ R S L + V
Sbjct: 703 TTEFYDKYEFYSLFQEITYFCSMEMSSFYLDIVKDRLYCEGTTSIERRSTQTVLTEVLKV 762
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L+R +AP++ A+E++ +P
Sbjct: 763 LVRIIAPVLSFTADEIWERIPE 784
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 242/418 (57%), Gaps = 15/418 (3%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE--- 73
G P F+LHDGPPYANG HIGHA+NKILKDI L+ L+G Y+PGWD HGLPIE
Sbjct: 54 GAPFFVLHDGPPYANGDIHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHGLPIEWKI 113
Query: 74 LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
++ + K K ++PL IR++ K +AL+ + QK F+ G+L +W+ N Y T EY Q
Sbjct: 114 MEELGEKAKNMTPLQIRQECKKYALKWVEKQKEGFKRLGILGNWD-NPYITLMPEYEAEQ 172
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
L F +Y+ Y+Y+ LKPVYWSP++ TALAE+E+EYK D S SIY+K + Q L
Sbjct: 173 LKVFKEIYENGYVYKGLKPVYWSPTTETALAEAEIEYK-DVESHSIYVKFEGTQDLLDKL 231
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDI 253
G + LIWTTTPW+LPAN + +P +Y + + N+++AK L E++ T
Sbjct: 232 -GVEEASILIWTTTPWTLPANLGVFLHPEFDYGLYKTEKGNLVLAKELAETVFNTLGISY 290
Query: 254 EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 313
E++ +F G L+ Y HP R+ ++ +V++ GTG VH AP HG DD+ +
Sbjct: 291 ELLKEFKGTELEKTHYRHPFL--DREGLVMLGDYVTADAGTGAVHSAPGHGADDYNYSRK 348
Query: 314 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWR 372
++ VL+ + ++G + +AG EG+ V L E +L + HSYP+DWR
Sbjct: 349 YELGVLSPVDDRGHMTKEAGK-YEGMFYAKASNVIVQDLTESGHLLHHSKFVHSYPHDWR 407
Query: 373 TKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRPGTALAESELEYKPD 430
+KKPVI +A++QWFI + K + ++ +R G S LE +PD
Sbjct: 408 SKKPVIFRATEQWFISVDESDIRENAIKALDDVEFVPSWGKNRIG-----SMLETRPD 460
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 6/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPV 1164
L+ + ++G + +AG EG+ V L E +L + HSYP+DWR+KKPV
Sbjct: 354 LSPVDDRGHMTKEAGK-YEGMFYAKASNVIVQDLTESGHLLHHSKFVHSYPHDWRSKKPV 412
Query: 1165 ILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
I +A++QWFI D I+ A+ L+ V FVP K + + RP W ISRQRVWGVP
Sbjct: 413 IFRATEQWFISVDESDIRENAIKALDDVEFVPSWGKNRIGSMLETRPDWTISRQRVWGVP 472
Query: 1223 IPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IP+FY+ D +I + ++ + G D WW ++++
Sbjct: 473 IPLFYNRATDEVIYEPEIMDRVIEMVKKEGTDIWWKYEAKEII 515
>gi|421731788|ref|ZP_16170911.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|407074001|gb|EKE46991.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
M27]
Length = 921
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 333/618 (53%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ K+ L G + +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFKVKDGKGVLENGES---FIIWTTTPWTMPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWT--FQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P LEY+V V +VA L+EN+ F+ + +VV + G+ L+ IT HP+ R
Sbjct: 248 PDLEYNVIKVGDKRYVVAAELIENVAEACGFE-NPEVVASYKGRELEYITAEHPLYG--R 304
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ V++ GTG VH AP HG+DDF++ + VL + +G + D PG EG
Sbjct: 305 DSLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEG 363
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 364 MFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ II +E I+H
Sbjct: 424 DAIKQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIITDET-IEHV 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD-- 765
L +HG + W+ + LL + N TK DI+D+WFDSG S VL++
Sbjct: 483 SELFKQHGSNAWFEREAKDLLPEGFTHPGSPNGIFTKEQDIMDVWFDSGSSHQAVLEERD 542
Query: 766 ---KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D G KMSKS+GN
Sbjct: 543 DLVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDANGRKMSKSLGNT 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I D T+ AK+L G ++LR WV++ + P+
Sbjct: 603 I---DPTKIAKQL--------------------------GAEILRLWVSS-VNYQADHPV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
++IL + +K+R++ R+L G L + S ++ R VD YML +L + + +
Sbjct: 633 SEDILKQVAEVYRKVRNTFRFLHGNLFDFDPSVNAVDVKDLREVDQYMLIKLNKLIDKVK 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y E+++A + NF ELS+FY KD +Y + + R S + L+
Sbjct: 693 KAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALV 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ API+PH A+E++SHL
Sbjct: 753 KLTAPILPHTADEMWSHL 770
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 228/398 (57%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S D RK +++A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVADFRKLCEDYAWQQIERQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L G + +IWTTTPW++PAN I+ +P LEY+V V +VA L+
Sbjct: 213 FKVKDGKGVLENGES---FIIWTTTPWTMPANLGISVHPDLEYNVIKVGDKRYVVAAELI 269
Query: 243 ESLKWT--FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
E++ F+ + EVV + G+ L+ IT HP+ RD ++ V++ GTG VH A
Sbjct: 270 ENVAEACGFE-NPEVVASYKGRELEYITAEHPLYG--RDSLVMLGDHVTTDAGTGCVHTA 326
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDF++ + VL + +G + D PG EG+ K L E L
Sbjct: 327 PGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEGMFYDKANKPITEKLEENGALLK 385
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 386 LEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
D PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF
Sbjct: 356 DEAPGFEGMFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASI 415
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + + L ++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ II
Sbjct: 416 KDFRSDLLDAIKQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIIT 475
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L +HG + W+ + LL
Sbjct: 476 DET-IEHVSELFKQHGSNAWFEREAKDLL 503
>gi|423511930|ref|ZP_17488461.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-1]
gi|402450191|gb|EJV82025.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-1]
Length = 921
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 332/643 (51%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELECTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L N SE+T +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + + R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
V PI+PH A+EV+ ++P + + + GS A R
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEATEVEGSEALR 795
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELECTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|228998676|ref|ZP_04158263.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|229006178|ref|ZP_04163864.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228755019|gb|EEM04378.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228761144|gb|EEM10103.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
Length = 962
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 325/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + +LEG D +IWTTTPW+LPAN I+ +
Sbjct: 232 SALAEAEIEYN-DKKSASIYVAFPVKD-GKDVLEG--DEKFIIWTTTPWTLPANLGISVH 287
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L + + T + + +VV G L+ HP +RD
Sbjct: 288 PELEYSIVKVNDEKYIIASELFDTVSKTLEWENAEVVKTVKGSELEYTVAKHPFY--ERD 345
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 346 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFLVGKQYGLEVLCPVDDKGVLTSEA-PGFEGL 404
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 405 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 464
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 465 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 523
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L E+G + W+ + LL + S N K DI+D+WFDSG S VL++
Sbjct: 524 DLFRENGSNVWFEREAKDLLPEGFTHPSSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 583
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 584 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 643
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 644 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 673
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + S +++ R VD YML +L + +
Sbjct: 674 DDILKQVAEVYRKIRNTFRFLLGNLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKE 733
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY ++ N R + L+++ L +
Sbjct: 734 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEAANHHDRRAIQTVLYDVLVALTK 793
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 794 LVTPILPHTADEVWPYVPG 812
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 228/396 (57%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 77 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 136
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E +N Q+ +F+ GV ADW+ Y
Sbjct: 137 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWDRP-YI 194
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F + K+ YIY+ KPVYWSP+S +ALAE+E+EY D S SIY+
Sbjct: 195 TLEPAYEAQQIKVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEIEYN-DKKSASIYVAF 253
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ +LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L +
Sbjct: 254 PVKD-GKDVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFD 310
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP +RD ++ V++ GTG VH AP
Sbjct: 311 TVSKTLEWENAEVVKTVKGSELEYTVAKHPFY--ERDSLVMLGEHVTTDAGTGCVHTAPG 368
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 369 HGEDDFLVGKQYGLEVLCPVDDKGVLTSEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 427
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 428 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 463
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 388 VDDKGVLTSEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 446
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L +E +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 447 ATAQWFASIEAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 506
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L E+G + W+ + LL
Sbjct: 507 AENGDPIITDE-TINHVADLFRENGSNVWFEREAKDLL 543
>gi|400601779|gb|EJP69404.1| isoleucyl-tRNA synthetase [Beauveria bassiana ARSEF 2860]
Length = 948
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 238/693 (34%), Positives = 347/693 (50%), Gaps = 54/693 (7%)
Query: 417 GTALAESELEYKPDHISKSIYLK--IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEYK DH+S Y+K I+ + L + L+A IWTTTPW+LPAN+ I
Sbjct: 189 ATALAEAELEYKDDHVSNCAYIKFPIRSHSGITELRDFDVPLYASIWTTTPWTLPANKAI 248
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
+ + Y+V + G ++VA +E ++ +V D PG L + Y + +
Sbjct: 249 GVHNDILYAVLQMNGYGLLVASSRIEAIRKYIPEAEIIVDDIPGSKLVGLEYHNKLRGIT 308
Query: 535 RDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG- 592
+ ++ A FVS+ GTGLVH AP HGQDD+ + LA I I ++G+++ +A P
Sbjct: 309 APWQPIIHADFVSADSGTGLVHLAPGHGQDDYEVCLAHGIEPFAPIDHKGRFTEEAYPDD 368
Query: 593 ----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
+IL G VL LV DV+ T QH YPYDWR+KKPV+++A+ QWF D
Sbjct: 369 PKVLTSAPSILDGGSSSVLELVAEDVIATHEIQHKYPYDWRSKKPVVIRATPQWFADVGS 428
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 707
IK +AL L+ V FVPE+ + L I R WCISRQR WGVPIP YD + I++
Sbjct: 429 IKDDALNALKNVKFVPENGRARLESFIKGRSEWCISRQRSWGVPIPALYDCNHKAIMDAD 488
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSD-VNSNVTKSNDILDIWFDSGISWSHVLKDK 766
I+H ++ E D W+S S + + + + + + +D+WFDSG SW+ + +K
Sbjct: 489 TIEHIINVMQERSSDAWFSDSPDDPVWIPEHLKGKYYRGSCTMDVWFDSGTSWTEI--EK 546
Query: 767 PAHVYMEGMDQINGWFMSSLLTSVALKHT---------APFRNVFLHGFVVDEKGAKMSK 817
V +EG DQ GWF SSLL+ VA + APFR + HGF +D +G KMSK
Sbjct: 547 QVDVCLEGSDQHRGWFQSSLLSYVAAQKADGKPAGSIIAPFRTLITHGFTLDAQGKKMSK 606
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GN +S ++ G P K + A + A G D LR W A
Sbjct: 607 SLGNTLSPEEVMNGTLLPPVKRKG-----------KDAGQPDALGPDALRLW-AGSCDFT 654
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTM 937
+ IG +IL + + + R+ L+ LLG +H +T ++R + ML + TM
Sbjct: 655 TDILIGPSILQPVHNALVRYRTILKMLLGSVHESGRNT-PLTRLDHIAML----QLSTTM 709
Query: 938 DTLYGEF---QYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ ++ + ++ + +L +V +LSAFY +KDRLYC G + I
Sbjct: 710 EQVWAAYNNHEFHKGVGILNRWVATDLSAFYLEALKDRLYCGDGGG--------AIEPIL 761
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGEAR 1054
+LR +AP+ P L EE +++ PS S H L S I L D
Sbjct: 762 VGMLRMLAPVTPVLVEEAWANRPSWMVEDSPMVHPARQLYKSPVIDSGRLKYDEQKLRED 821
Query: 1055 LSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
+ L +H L LA+EV S L
Sbjct: 822 IPKLFAVHEAIKAGLEPA-----RLAKEVGSSL 849
Score = 325 bits (833), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/401 (43%), Positives = 245/401 (61%), Gaps = 10/401 (2%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y+WQ + FIL DGPPYANG H GHA+NKILKD+ +R + G+RV + PGW
Sbjct: 35 EFYNWQSSRPSQDEPFILQDGPPYANGPLHTGHAINKILKDMVVRVQVQNGRRVVFRPGW 94
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE+KA+ T++ K LS +++RK+A+ A +T+ Q F S+GV+++W+ N + T
Sbjct: 95 DCHGLPIEMKALGTTETKGLSSVEVRKQARKLATKTVTEQMKGFRSFGVMSEWD-NKWTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK-- 182
D+ Y QL F + + IYR KPVYWSPSS TALAE+ELEYK DHVS Y+K
Sbjct: 154 MDRAYEIRQLRVFQKMVRHGLIYRKHKPVYWSPSSATALAEAELEYKDDHVSNCAYIKFP 213
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
I+ + L + L+A IWTTTPW+LPAN+ I + + Y+V + G ++VA +
Sbjct: 214 IRSHSGITELRDFDVPLYASIWTTTPWTLPANKAIGVHNDILYAVLQMNGYGLLVASSRI 273
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCAP 301
E+++ +V D PG L + Y + + + ++ A FVS+ GTGLVH AP
Sbjct: 274 EAIRKYIPEAEIIVDDIPGSKLVGLEYHNKLRGITAPWQPIIHADFVSADSGTGLVHLAP 333
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLVEPD 356
HGQDD+ + LA I I ++G+++ +A P +IL G VL LV D
Sbjct: 334 GHGQDDYEVCLAHGIEPFAPIDHKGRFTEEAYPDDPKVLTSAPSILDGGSSSVLELVAED 393
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ T QH YPYDWR+KKPV+++A+ QWF D IK +AL
Sbjct: 394 VIATHEIQHKYPYDWRSKKPVVIRATPQWFADVGSIKDDAL 434
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 1109 ITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
I ++G+++ +A P +IL G VL LV DV+ T QH YPYDWR+KKP
Sbjct: 354 IDHKGRFTEEAYPDDPKVLTSAPSILDGGSSSVLELVAEDVIATHEIQHKYPYDWRSKKP 413
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+++A+ QWF D IK +AL L+ V FVPE+ + L I R WCISRQR WGVPI
Sbjct: 414 VVIRATPQWFADVGSIKDDALNALKNVKFVPENGRARLESFIKGRSEWCISRQRSWGVPI 473
Query: 1224 PVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWS 1256
P YD + I++ I+H ++ E D W+S
Sbjct: 474 PALYDCNHKAIMDADTIEHIINVMQERSSDAWFS 507
>gi|229061501|ref|ZP_04198845.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
gi|228717735|gb|EEL69385.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
Length = 921
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 332/643 (51%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L N SE+T +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + + R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
V PI+PH A+EV+ ++P + + + GS A R
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEATEVEGSEALR 795
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|311029946|ref|ZP_07708036.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
Length = 922
Score = 362 bits (929), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 224/617 (36%), Positives = 323/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ K+ +L+G+ +IWTTTPW++PAN IA +
Sbjct: 192 SALAEAEIEYQ-DKRSPSIYVAFKVEDGKG-VLDGSESF--IIWTTTPWTIPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
L+YSV V G+ I+A L E + T + D VV G L+ + HP+ R
Sbjct: 248 ADLDYSVVEVNGSKFIIAAELFETVSSTLEWEDAKVVKTLKGAELEHVVAKHPLY--DRT 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EGL
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGKKYGLDVLCPVDAKGNMTEEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L N+ HSYP+DWRTKKP I +A+ QWF ++I+ + L
Sbjct: 365 FYDEANKPITEKLQEAGALLKLNFITHSYPHDWRTKKPTIFRATAQWFASIDKIRDQLLE 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +G II +E I H
Sbjct: 425 AVAETKWVPAWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYAENGQEIITDE-TIDHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L EHG + W+ + LL + N K DI+D+WFDSG S VL++
Sbjct: 484 ALFREHGSNIWFEKEAKDLLPEGFTHEGSPNGTFFKEMDIMDVWFDSGSSHQSVLEERDD 543
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL TSVA+ AP++ + HGF +D +G KMSKS+GNV+
Sbjct: 544 LQRPADLYLEGSDQYRGWFNSSLTTSVAVTGKAPYKGILSHGFALDGEGRKMSKSLGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
LP +K + G D+LR WVA+ V +
Sbjct: 604 -----------LP------------------SKVMNQLGADILRLWVAS-VDYQSDVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
NIL + +KIR++ R+LLG L + + ++ R VD YM+ +L +
Sbjct: 634 DNILKQVAEVYRKIRNTFRFLLGNLADFDSTVNAVDVKDLREVDRYMMVKLNNLITKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++++A + NF ELS+FY KD LY + + R + L+ L +
Sbjct: 694 SYEDYEFAGIYHAVHNFCTIELSSFYLDFAKDILYIEGKDQHDRRAIQTVLYETLLALTK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
V PI+PH A+EV+SH+
Sbjct: 754 LVTPILPHTADEVWSHI 770
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 226/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y ++ +P ++LHDGPPYANG H+GHA+NK+LKD +R + G YVPGW
Sbjct: 35 DIYKKVQDRTKDRPMYVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMSGYHAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K +S D RK + +A + ++ Q+ +F GV DW N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMSVADFRKLCEEYAYDQVDRQREQFMRLGVRGDW-FNPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K IY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 ITLKPEYEAQQIKVFGEMAKNGLIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSPSIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ +L+G+ +IWTTTPW++PAN IA + L+YSV V G+ I+A L
Sbjct: 213 FKVEDGKG-VLDGSESF--IIWTTTPWTIPANLGIAVHADLDYSVVEVNGSKFIIAAELF 269
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ T + D +VV G L+ + HP+ R ++ V++ GTG VH AP
Sbjct: 270 ETVSSTLEWEDAKVVKTLKGAELEHVVAKHPLY--DRTSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++ + VL + +G + +A PG EGL K L E L
Sbjct: 328 GHGEDDFIIGKKYGLDVLCPVDAKGNMTEEA-PGFEGLFYDEANKPITEKLQEAGALLKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N+ HSYP+DWRTKKP I +A+ QWF ++I+ + L
Sbjct: 387 NFITHSYPHDWRTKKPTIFRATAQWFASIDKIRDQLL 423
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ +G + +A PG EGL K L E L N+ HSYP+DWRTKKP I +
Sbjct: 348 VDAKGNMTEEA-PGFEGLFYDEANKPITEKLQEAGALLKLNFITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++I+ + L + +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIDKIRDQLLEAVAETKWVPAWGETRLYNMVRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G II +E I H L EHG + W+ + LL
Sbjct: 467 AENGQEIITDE-TIDHVSALFREHGSNIWFEKEAKDLL 503
>gi|407977670|ref|ZP_11158507.1| isoleucyl-tRNA ligase [Bacillus sp. HYC-10]
gi|407415923|gb|EKF37504.1| isoleucyl-tRNA ligase [Bacillus sp. HYC-10]
Length = 921
Score = 362 bits (929), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 226/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ K+ L G +IWTTTPW+LPAN I +
Sbjct: 192 SALAEAEIEYK-DKRSPSIYVSFKVKDGKGVLENGE---QFIIWTTTPWTLPANLGICVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV V +VA L E + T D +VV G+ L I HPI RD
Sbjct: 248 PNLEYSVLQVGTERYVVASELAEQVAKTLGFDDYEVVKTLKGKELDTIVAEHPIYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + + VL + +G + +A PG EGL
Sbjct: 306 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGMKYGLEVLCPVDEKGVMTEEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L L ++ HSYP+DWRTKKP I +A+ QWF + + L
Sbjct: 365 FYEDANKAVTEQLEAKGALKKLDFITHSYPHDWRTKKPTIYRATAQWFASIKDFREALLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + + R WCISRQRVWGVPIPVFY +G+ II +E I+H
Sbjct: 425 NIKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIITDE-TIQHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL++
Sbjct: 484 QLFREHGSNIWFEKEAKELLPEGFTHPGSPNGEFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D++G KMSKS+GN I
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLGNTI 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
D T+ AK+L G ++LR WV++ + P+
Sbjct: 604 ---DPTKVAKQL--------------------------GAEILRLWVSS-VNYQADHPVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+L G L + + ++ R VD Y+L +L + N +
Sbjct: 634 DDILKQVAEVYRKIRNTFRFLHGNLFDFDPAVNAVPVEELREVDQYILIKLNKLINKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +++++ + NF ELS+FY KD +Y + N R S + L++
Sbjct: 694 AYDDYEFSVVYHAIHNFCTIELSSFYLDFAKDVVYIEHANHPDRRSMQTVFYETLMALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LTAPILPHTADELWSHL 770
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 223/398 (56%), Gaps = 14/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y E G+P FILHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYQMVLERTKGRPTFILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K +S + RK + +A + I Q+ +F+ GV ADW+ N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWD-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 VTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYK-DKRSPSIYVS 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L G +IWTTTPW+LPAN I +P LEYSV V +VA L
Sbjct: 213 FKVKDGKGVLENGE---QFIIWTTTPWTLPANLGICVHPNLEYSVLQVGTERYVVASELA 269
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E + T D EVV G+ L I HPI RD ++ V++ GTG VH AP
Sbjct: 270 EQVAKTLGFDDYEVVKTLKGKELDTIVAEHPIYG--RDSLVMLGDHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++ + + VL + +G + +A PG EGL K L L
Sbjct: 328 GHGEDDFIVGMKYGLEVLCPVDEKGVMTEEA-PGFEGLFYEDANKAVTEQLEAKGALKKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
++ HSYP+DWRTKKP I +A+ QWF + + EAL+
Sbjct: 387 DFITHSYPHDWRTKKPTIYRATAQWFASIKDFR-EALL 423
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L L ++ HSYP+DWRTKKP I +A+ QWF
Sbjct: 356 EEAPGFEGLFYEDANKAVTEQLEAKGALKKLDFITHSYPHDWRTKKPTIYRATAQWFASI 415
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + L ++ +VP + L + + R WCISRQRVWGVPIPVFY +G+ II
Sbjct: 416 KDFREALLDNIKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIIT 475
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L EHG + W+ ++LL
Sbjct: 476 DE-TIQHVSQLFREHGSNIWFEKEAKELL 503
>gi|169827027|ref|YP_001697185.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
gi|168991515|gb|ACA39055.1| Isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
Length = 922
Score = 362 bits (929), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 226/626 (36%), Positives = 333/626 (53%), Gaps = 64/626 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
+ALAE+E+EYK D S SIY+ + VPA D +IWTTTPW+LPAN
Sbjct: 192 SALAEAEIEYK-DIKSPSIYVSFAIKDAKGVVPA-------DAKFVIWTTTPWTLPANLG 243
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
I+ NP Y V +V I+AK L+E + + + +V+ + G+ L I HP
Sbjct: 244 ISLNPEFMYVVVAVANKKFIIAKDLLETVATALEWEAYEVIQEVKGEVLDRIVAQHPFY- 302
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RD ++ V++ GTG VH AP HG+DD+ ++ + +L+ + N G Y+ D PG
Sbjct: 303 -DRDSLVMVGEHVTADAGTGCVHTAPGHGEDDYHISKQYGLDILSPLDNSGCYT-DEAPG 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ K L E D L + + HSYP+DWRTKKPVI +A+ QWF E +
Sbjct: 361 FEGVFYNDANKLVTEKLKEVDALESLGFISHSYPHDWRTKKPVIYRATPQWFASVEAFRG 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E L ++ F P + L + I R W ISRQR WGVPIP+FY +G+ II E I
Sbjct: 421 ELLEAVKATAFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIPIFYAENGEPIITPE-TI 479
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + ++LL + N TK NDI+D+WFDSG S VL
Sbjct: 480 SHISALFREHGSNIWFKKTAKELLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSHQGVLV 539
Query: 765 DK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + HGFV+D +G KMSKS+G
Sbjct: 540 ERGMKYPADLYLEGSDQHRGWFNSSLITSVAINGFAPYKGLLTHGFVLDGEGRKMSKSLG 599
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI +P K + YG D+LR WVA+ V
Sbjct: 600 NVI-----------IPQ------------------KVMDQYGADILRLWVAS-VDYTADV 629
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
I ++L + +KIR++ R+L G + + + ++ R +D Y+ RL + T
Sbjct: 630 RISMDMLKQVSEVYRKIRNTFRFLHGNIADFDPTKDRVAYAELREMDQYVYMRLQDVLKT 689
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ T Y + +A V+ NFV ELS+FY + KD +Y + + + R + +++
Sbjct: 690 VRTAYDRYDFAAVYHVVNNFVAVELSSFYLDIAKDVVYIEGSDNKDRRAMQTVIYDTLMT 749
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGT 1022
L++ + PI+PH +E++S+L + QGT
Sbjct: 750 LVKIMTPIIPHTTDEMWSYLHA-QGT 774
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 231/396 (58%), Gaps = 22/396 (5%)
Query: 11 QREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
Q E G+PE++LHDGPPYANG HIGHA+NK+LKD+ R + G V+Y+PGWD HGL
Sbjct: 41 QMERTEGRPEYVLHDGPPYANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGL 100
Query: 71 PIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
PIE +A+T+K K +S R+ + +A E I+ Q+ +F G+ +WE N Y T
Sbjct: 101 PIE-QALTNKGVKRKEMSVAAFRQLCEEYAYEQIDNQRNQFRRLGIRGNWE-NPYITLKP 158
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F + ++ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+ +
Sbjct: 159 EFEARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEYK-DIKSPSIYVSFAIKD 217
Query: 188 ----VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
VPA D +IWTTTPW+LPAN I+ NP Y V +V I+AK L+E
Sbjct: 218 AKGVVPA-------DAKFVIWTTTPWTLPANLGISLNPEFMYVVVAVANKKFIIAKDLLE 270
Query: 244 SLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ + + EV+ + G+ L I HP RD ++ V++ GTG VH AP
Sbjct: 271 TVATALEWEAYEVIQEVKGEVLDRIVAQHPFY--DRDSLVMVGEHVTADAGTGCVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DD+ ++ + +L+ + N G Y+ D PG EG+ K L E D L +
Sbjct: 329 HGEDDYHISKQYGLDILSPLDNSGCYT-DEAPGFEGVFYNDANKLVTEKLKEVDALESLG 387
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF E + E L
Sbjct: 388 FISHSYPHDWRTKKPVIYRATPQWFASVEAFRGELL 423
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
L+ + N G Y+ D PG EG+ K L E D L + + HSYP+DWRTKKPV
Sbjct: 345 LSPLDNSGCYT-DEAPGFEGVFYNDANKLVTEKLKEVDALESLGFISHSYPHDWRTKKPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF E + E L ++ F P + L + I R W ISRQR WGVPIP
Sbjct: 404 IYRATPQWFASVEAFRGELLEAVKATAFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIP 463
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY +G+ II E I H L EHG + W+ ++LL
Sbjct: 464 IFYAENGEPIITPE-TISHISALFREHGSNIWFKKTAKELL 503
>gi|403169532|ref|XP_003328980.2| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168305|gb|EFP84561.2| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1020
Score = 362 bits (928), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 224/649 (34%), Positives = 347/649 (53%), Gaps = 76/649 (11%)
Query: 417 GTALAESELEYKPDHISKSIYLKIK-LNQVPAHLLEGATD-------LHALIWTTTPWSL 468
GTALAE+E+EY+ DH+S+S+Y+ LN PA L+ TD L A +WTTTPW+L
Sbjct: 223 GTALAEAEIEYRDDHLSRSVYVAFDILNPSPA--LQAITDRFVFNAKLKAAVWTTTPWTL 280
Query: 469 PANQFIAFNPALEYSVASVKGANVIVAKCLV---------ENLKWTFQTDIDVVCDFPGQ 519
ANQ +A + + YS+ + ++ A+ L+ +NL ++++VV + G+
Sbjct: 281 IANQAVAISKSARYSLVKLSSGDLSNAEVLIFATDRLPALKNLIADESSEMEVVGELSGE 340
Query: 520 YLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL--------AE 571
L+ TY H N DL + A V+ G+GLVH AP+HG +DF +E
Sbjct: 341 ELELSTYRHDFNSS--DLPIFCANHVTVESGSGLVHTAPSHGLEDFYAYTNFMKTQRPSE 398
Query: 572 KIPVLNLITNQGKYSP----DAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE-NYQHSY 624
+ ++ ++ +QGK++ + L G L DG ++V+ ++E ++ E +H Y
Sbjct: 399 SLSLIEVVDDQGKFNCQDPIEWSRRLHGKAALADGNNEVICMLEEQKRLIGKEVKIRHKY 458
Query: 625 PYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCIS 684
PYDWRTKKP++ K + QWF++ E I+ AL+ ++ V+F P +++ L + R WCIS
Sbjct: 459 PYDWRTKKPILTKITSQWFVELENIRQAALSMIKRVDFHPPTSRTRLESFLKSRSEWCIS 518
Query: 685 RQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV 742
RQR WGVPIPV Y +T ++ +I ++ + G D WW VE +
Sbjct: 519 RQRPWGVPIPVLYSVETGLPLLTYESITWIIDILRDRGTDHWWQGPVEDFIPPG-TPGQF 577
Query: 743 TKSNDILDIWFDSGISWSHVLKDKPAHVYMEGMDQINGWFMSSLLTSVAL-----KHTAP 797
TK D++D+WFDSG+SW A + +EG DQ GWF S +LT +A +
Sbjct: 578 TKGTDVMDVWFDSGVSWL-TSDGATADMILEGSDQHRGWFQSQMLTFIAATQPHQRDDLV 636
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
+++V HGF +D+ G KMSKS GNV+S ++ G + KK
Sbjct: 637 YKSVVTHGFTLDKHGRKMSKSSGNVLSPLELIDGDE---------------------TKK 675
Query: 858 LPAYGVDVLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
P +G+DVLR+W A+ ++D V IG + L+ D V+KIRS+ R+LLG ++ +
Sbjct: 676 QPGFGIDVLRFWTASVDFTRD--VTIGVDQLSRLSDVVRKIRSTARFLLGNVYRDDDVKS 733
Query: 917 S---ISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLV 969
S +SR ++ YML L EFQ ++ Y E + + +++ NF LSAFYF V
Sbjct: 734 SEVGLSRGDFGLIEEYMLHLLYEFQQSVQRAYNELDFKQVVQLITNFTTKTLSAFYFETV 793
Query: 970 KDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
KD LY ++ R L+ + + + +API+PHLAEE+ H S
Sbjct: 794 KDILYSNAQGDPERQRVLNLMSKVLEIYKLAIAPILPHLAEEIAIHQTS 842
Score = 283 bits (723), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 166/429 (38%), Positives = 247/429 (57%), Gaps = 44/429 (10%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
L+ WQ L +P + LHDGPPYANG+ H+GHA+NKILKDI R+ LL G R++Y+PG+D
Sbjct: 66 LWDWQSNQLQ-RPVWTLHDGPPYANGSIHMGHALNKILKDIINRNKLLHGFRINYLPGFD 124
Query: 67 CHGLPIELKAITS------KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
CHGLP+ELKAI + L P+ +R A+ A+E I Q +F+ +L DW
Sbjct: 125 CHGLPLELKAIQRLRTACHDTESLEPVQVRDAARATAMEGIELQTQQFDRLSILTDW-GK 183
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
+ T D +Y QL F + K I R KPV++SPSS TALAE+E+EY+ DH+S+S+Y
Sbjct: 184 AWRTLDHDYEIKQLDLFAQMAKNRLISRHRKPVHFSPSSGTALAEAEIEYRDDHLSRSVY 243
Query: 181 LKIK-LNQVPAHLLEGATD-------LHALIWTTTPWSLPANQFIAFNPALEYSVASVKG 232
+ LN PA L+ TD L A +WTTTPW+L ANQ +A + + YS+ +
Sbjct: 244 VAFDILNPSPA--LQAITDRFVFNAKLKAAVWTTTPWTLIANQAVAISKSARYSLVKLSS 301
Query: 233 ANVIVAKCLV---------ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLL 283
++ A+ L+ ++L +++EVV + G+ L+ TY H N DL +
Sbjct: 302 GDLSNAEVLIFATDRLPALKNLIADESSEMEVVGELSGEELELSTYRHDFNSS--DLPIF 359
Query: 284 PAGFVSSSKGTGLVHCAPAHGQDDFLLAL--------AEKIPVLNLITNQGKYSP----D 331
A V+ G+GLVH AP+HG +DF +E + ++ ++ +QGK++ +
Sbjct: 360 CANHVTVESGSGLVHTAPSHGLEDFYAYTNFMKTQRPSESLSLIEVVDDQGKFNCQDPIE 419
Query: 332 AGPGLEGLNILGDGKDQVLHLVEPD--VLWTE-NYQHSYPYDWRTKKPVILKASQQWFID 388
L G L DG ++V+ ++E ++ E +H YPYDWRTKKP++ K + QWF++
Sbjct: 420 WSRRLHGKAALADGNNEVICMLEEQKRLIGKEVKIRHKYPYDWRTKKPILTKITSQWFVE 479
Query: 389 TERIKPEAL 397
E I+ AL
Sbjct: 480 LENIRQAAL 488
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 96/167 (57%), Gaps = 9/167 (5%)
Query: 1106 LNLITNQGKYSP----DAGPGLEGLNILGEGKDQVLHLVEPD--VLWTE-NYQHSYPYDW 1158
+ ++ +QGK++ + L G L +G ++V+ ++E ++ E +H YPYDW
Sbjct: 403 IEVVDDQGKFNCQDPIEWSRRLHGKAALADGNNEVICMLEEQKRLIGKEVKIRHKYPYDW 462
Query: 1159 RTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRV 1218
RTKKP++ K + QWF++ E I+ AL+ ++ V+F P +++ L + R WCISRQR
Sbjct: 463 RTKKPILTKITSQWFVELENIRQAALSMIKRVDFHPPTSRTRLESFLKSRSEWCISRQRP 522
Query: 1219 WGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WGVPIPV Y +T ++ +I ++ + G D WW PVE +
Sbjct: 523 WGVPIPVLYSVETGLPLLTYESITWIIDILRDRGTDHWWQGPVEDFI 569
>gi|229180171|ref|ZP_04307515.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
gi|228603380|gb|EEK60857.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
Length = 921
Score = 362 bits (928), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +V+ G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVMKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EV+ G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVMKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|423464447|ref|ZP_17441215.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|402420714|gb|EJV52985.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6O-1]
Length = 921
Score = 362 bits (928), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 322/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + +VV G L+ HP +RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWEKAEVVKTVKGSELEYTVAKHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTEAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYVPG 771
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + EVV G L+ HP +RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWEKAEVVKTVKGSELEYTVAKHPFY--ERDSLVMLGDHVTTEAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|435853597|ref|YP_007314916.1| isoleucyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
gi|433670008|gb|AGB40823.1| isoleucyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
Length = 930
Score = 362 bits (928), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 220/630 (34%), Positives = 340/630 (53%), Gaps = 56/630 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG---ATDLHALIWTTTPWSLPANQFI 474
TALAE+E+EY+ D SI++K + + +L G +D + +IWTTTPW++PANQ I
Sbjct: 193 TALAEAEIEYE-DINGPSIFVKFPVKE--GKVLGGEELTSDDYVVIWTTTPWTIPANQAI 249
Query: 475 AFNPALEYSVASVKGANVIVAKCLV-ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+ +P EY +A + ++ AK LV E ++ D + +F G+ L+ + HP
Sbjct: 250 SIHPDFEYVIAETETGRLVAAKELVAEMMEICDIEDYKIAAEFKGEELEGVICNHPFF-- 307
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ L+ V+ +G+G VH AP HG +D+++ + V + ++G ++ +AG
Sbjct: 308 DRESPLILGDHVTLEQGSGCVHTAPGHGHEDYVIGQEYDLDVYAPMDDKGVFTEEAGEDF 367
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G + L E D+L N+ HSYP+ WR K PVI +A++QWF E IK E
Sbjct: 368 VGKHYDKANIKVTELLKEDDLLMNLNFIDHSYPHCWRCKNPVIFRATEQWFASVEDIKDE 427
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
AL ++EV++ PE + L + I R WCISRQRVWGVPIP+FY D ++ E +I
Sbjct: 428 ALDAVKEVDWYPEWGEGRLANMIENRNDWCISRQRVWGVPIPIFYCDDCGEPLITEESIA 487
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL----NTSDVNSN-VTKSNDILDIWFDSGISWSHVLK- 764
L G W+ V+++L + D N TK DI+D+WFDSG S + VL+
Sbjct: 488 AVKELFANEGSGSWYQKDVDEILPEEISCGDCGHNDFTKEYDIMDVWFDSGASHASVLEN 547
Query: 765 ----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
D+PA +Y+EG DQ GWF SSLLTS+A + AP++ V +GF VD+ G KMSKSVG
Sbjct: 548 YDILDRPADLYLEGTDQYRGWFNSSLLTSIAARGEAPYKAVVTNGFTVDKNGKKMSKSVG 607
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV +S H++ + YG D+LR WVA+ K+ V
Sbjct: 608 NV-----------------------VSPHEV------IDQYGADILRLWVASSNFKE-DV 637
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I IL+ + + ++IR++ RY+LG L + + +++ +D + L +L E
Sbjct: 638 RISDKILSENSEVYRRIRNTARYILGNLSDFNPQEDAVASEELTEIDQWALMKLQELLKV 697
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +++ + + NF E+S+FY ++KDRLY + + R SG ++ I
Sbjct: 698 AEDAYESYEFHKVYHAVHNFCTVEMSSFYMDVLKDRLYTLAKDDRVRRSGQTAMYEILIT 757
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
L + VAPI+ H AEE++ +LP + S F
Sbjct: 758 LTKIVAPILVHTAEEIWQNLPEGKEAKSIF 787
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 226/400 (56%), Gaps = 15/400 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y E GK +FILHDGPPYANG HIGHA+NK LKD+ R LQG + YVPGWD
Sbjct: 36 IYKAALEQREGKEQFILHDGPPYANGDIHIGHALNKTLKDVVTRYYHLQGYQSPYVPGWD 95
Query: 67 CHGLPIELKAITSKDK----LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
HGLPIE K + DK LS ++R + K++AL + QK +F+ GV DW+ N Y
Sbjct: 96 THGLPIEHKVTSELDKDEREKLSIPELRDQCKDYALNYVERQKGQFKRLGVWGDWD-NPY 154
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + ++R LKPV+W + TALAE+E+EY+ D SI++K
Sbjct: 155 ITLQPEYEAKQIDVFGKMALDGLLFRGLKPVHWCTNCETALAEAEIEYE-DINGPSIFVK 213
Query: 183 IKLNQVPAHLLEG---ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
+ + +L G +D + +IWTTTPW++PANQ I+ +P EY +A + ++ AK
Sbjct: 214 FPVKE--GKVLGGEELTSDDYVVIWTTTPWTIPANQAISIHPDFEYVIAETETGRLVAAK 271
Query: 240 CLV-ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
LV E ++ D ++ +F G+ L+ + HP R+ L+ V+ +G+G VH
Sbjct: 272 ELVAEMMEICDIEDYKIAAEFKGEELEGVICNHPFF--DRESPLILGDHVTLEQGSGCVH 329
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG +D+++ + V + ++G ++ +AG G + L E D+L
Sbjct: 330 TAPGHGHEDYVIGQEYDLDVYAPMDDKGVFTEEAGEDFVGKHYDKANIKVTELLKEDDLL 389
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N+ HSYP+ WR K PVI +A++QWF E IK EAL
Sbjct: 390 MNLNFIDHSYPHCWRCKNPVIFRATEQWFASVEDIKDEAL 429
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +AG G + L E D+L N+ HSYP+ WR K PVI +
Sbjct: 353 MDDKGVFTEEAGEDFVGKHYDKANIKVTELLKEDDLLMNLNFIDHSYPHCWRCKNPVIFR 412
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF E IK EAL ++ V++ PE + L + I R WCISRQRVWGVPIP+FY
Sbjct: 413 ATEQWFASVEDIKDEALDAVKEVDWYPEWGEGRLANMIENRNDWCISRQRVWGVPIPIFY 472
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D ++ E +I L G W+ V+++L
Sbjct: 473 CDDCGEPLITEESIAAVKELFANEGSGSWYQKDVDEIL 510
>gi|423682086|ref|ZP_17656925.1| isoleucyl-tRNA synthetase [Bacillus licheniformis WX-02]
gi|383438860|gb|EID46635.1| isoleucyl-tRNA synthetase [Bacillus licheniformis WX-02]
Length = 922
Score = 362 bits (928), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + L G +IWTTTPW++PAN IA +
Sbjct: 192 SALAEAEIEYH-DKRSPSIYVAFDVKDGKGVLTNGEK---IVIWTTTPWTIPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV + GA ++A L+E++ K D +VV G+ L+ I +HP+ RD
Sbjct: 248 PELEYSVVATGGARYVMASALIESVAKAIGFEDHEVVQTVKGKDLEHIVAVHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EGL
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGHMTSEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP I +A+ QWF + + E L
Sbjct: 365 FYDQANKPITEQLEEKGALLKLDFITHSYPHDWRTKKPTIFRATAQWFASIKDFRDELLE 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+++ +VPE + L + I R WCISRQR WGVPIPVFY +G+ II +E I H
Sbjct: 425 AVKKTKWVPEWGETRLYNMIRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TINHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ +LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFREHGSNIWFEKEANELLPEGFTHPGSPNGKFTKEQDIMDVWFDSGSSHQAVLEERED 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SS+ T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSISTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSLGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V +
Sbjct: 604 -----------VPA------------------KIMNQFGADILRLWVAS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G + + + +I+ R VD Y+L +L +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNIADFDPAKDAIAVEDLREVDQYILIKLNSLIEKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+ +A + NF ELS+FY KD +Y + + + R S + L++
Sbjct: 694 AYEEYDFAVIYHAVHNFCAIELSSFYMDFAKDVVYIEHADHKDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+API+PH A+E++SH
Sbjct: 754 LIAPILPHTADEMWSHF 770
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/397 (42%), Positives = 229/397 (57%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++YS ++ G+P F+LHDGPPYANG H+GHA+NK+LKD +RS + G YVPGW
Sbjct: 35 DIYSLVQKRTEGRPMFVLHDGPPYANGDIHMGHALNKVLKDFIVRSRSMSGYHAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K ++ + RK + +A + I QKA+F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMTVAEFRKLCEEYAWQQIEGQKAQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 154 VTLKPEFEAQQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYH-DKRSPSIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN IA +P LEYSV + GA ++A L+
Sbjct: 213 FDVKDGKGVLTNGEK---IVIWTTTPWTIPANLGIAVHPELEYSVVATGGARYVMASALI 269
Query: 243 ESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES+ K D EVV G+ L+ I +HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ESVAKAIGFEDHEVVQTVKGKDLEHIVAVHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++ + VL + +G + +A PG EGL K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGHMTSEA-PGFEGLFYDQANKPITEQLEEKGALLKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKP I +A+ QWF + + E L
Sbjct: 387 DFITHSYPHDWRTKKPTIFRATAQWFASIKDFRDELL 423
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ +G + +A PG EGL K L E L ++ HSYP+DWRTKKP I +
Sbjct: 348 VDEKGHMTSEA-PGFEGLFYDQANKPITEQLEEKGALLKLDFITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + E L ++ +VPE + L + I R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKDFRDELLEAVKKTKWVPEWGETRLYNMIRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ +LL
Sbjct: 467 AENGEPIITDE-TINHVSELFREHGSNIWFEKEANELL 503
>gi|340749643|ref|ZP_08686496.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
gi|229421475|gb|EEO36522.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
Length = 933
Score = 362 bits (928), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/623 (34%), Positives = 334/623 (53%), Gaps = 56/623 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EYK + S SIY+K++ N L + +IWTTTPW+LPAN I+ N
Sbjct: 193 TALAEAEIEYK-NVTSPSIYVKMEANADLLERLGLTEETWVVIWTTTPWTLPANMAISLN 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P EY V + N+I+AK L E + + ++V +F G L+ TY HP +R
Sbjct: 252 PNFEYGVYKTEKGNLILAKDLAEKAFAEMEIAEYELVKEFIGSDLERATYKHPF--LERT 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ I V++ I N+G + +AG GL
Sbjct: 310 GMIILGTHVTADAGTGCVHTAPGHGQDDYVVGTRYGIEVISPINNKGVLTEEAGQ-FAGL 368
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
L K+ V HL E +L +N +HSYP+DWR+K PVI +A++QWF+ E ++ A
Sbjct: 369 FYLKANKEIVAHLTETGHLLKLKNIEHSYPHDWRSKTPVIFRATEQWFVKAEGSDLRERA 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L L+ V FVP + + + RP WCISRQRVWGVPIPVFY+ +T I N+ +
Sbjct: 429 LKALDNVEFVPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFYNEETGKEIYNKEILAR 488
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVLKD 765
++ + G W + + E+L+ + + K +I+D+WFDSG+S VL+
Sbjct: 489 IVEIVKKEGTAAWLTHTAEELIGEELLEKYNLKGVTLRKETNIMDVWFDSGVSHRSVLET 548
Query: 766 K------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF +SLLTS+ H AP++ + HGFV D +G KMSKSV
Sbjct: 549 RGELLHRPADMYLEGSDQHRGWFQTSLLTSIGSTHDAPYKKILTHGFVNDGEGKKMSKSV 608
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ D+ + YG D+LR W A+ ++
Sbjct: 609 GNVVVPADV-----------------------------IKVYGADILRLWCASVDYRED- 638
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V I NIL + +++R++ RY+LG ++ + +T ++ +D + L +L +
Sbjct: 639 VKISDNILKQMAEAYRRVRNTARYILGNSNDFNPATDKVAYKDLMEIDKWALNKLEILKR 698
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++++ + + F ++SAFY ++KDRLY + N R S + I
Sbjct: 699 RVTENYEKYEFYNLFQDIHYFAGVDMSAFYLDIIKDRLYTEGTNSLDRKSAQTVMTEILL 758
Query: 996 VLLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ AEE++ LP
Sbjct: 759 TLTKMIAPILSFTAEEIWDTLPE 781
Score = 317 bits (811), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/426 (42%), Positives = 247/426 (57%), Gaps = 15/426 (3%)
Query: 10 WQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+++ G FILHDGPPYANG HIGHA+NKILKDI L+ L+G Y+PGWD HG
Sbjct: 40 YEKGLTKGTKSFILHDGPPYANGDIHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHG 99
Query: 70 LPIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFD 126
LPIELK + K K +SPL+IRK +AL+ + Q+ F+ GVL DWE N Y T
Sbjct: 100 LPIELKVTEKLGEKAKEMSPLEIRKLCTEYALKWVGIQREGFKRLGVLGDWE-NPYLTLK 158
Query: 127 KEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN 186
EY QL F LY+ YI++ LKP+YWSP + TALAE+E+EYK + S SIY+K++ N
Sbjct: 159 PEYEAKQLEVFGELYENGYIFKGLKPIYWSPVTETALAEAEIEYK-NVTSPSIYVKMEAN 217
Query: 187 QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
L + +IWTTTPW+LPAN I+ NP EY V + N+I+AK L E
Sbjct: 218 ADLLERLGLTEETWVVIWTTTPWTLPANMAISLNPNFEYGVYKTEKGNLILAKDLAEKAF 277
Query: 247 WTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
+ + E+V +F G L+ TY HP +R ++ V++ GTG VH AP HGQ
Sbjct: 278 AEMEIAEYELVKEFIGSDLERATYKHPF--LERTGMIILGTHVTADAGTGCVHTAPGHGQ 335
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQ 364
DD+++ I V++ I N+G + +AG GL L K+ V HL E +L +N +
Sbjct: 336 DDYVVGTRYGIEVISPINNKGVLTEEAGQ-FAGLFYLKANKEIVAHLTETGHLLKLKNIE 394
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRPGTALAESE 424
HSYP+DWR+K PVI +A++QWF+ E K + N+ +R G S
Sbjct: 395 HSYPHDWRSKTPVIFRATEQWFVKAEGSDLRERALKALDNVEFVPAWGRNRIG-----SM 449
Query: 425 LEYKPD 430
LE +PD
Sbjct: 450 LETRPD 455
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I N+G + +AG GL L K+ V HL E +L +N +HSYP+DWR+K PVI +
Sbjct: 352 INNKGVLTEEAGQ-FAGLFYLKANKEIVAHLTETGHLLKLKNIEHSYPHDWRSKTPVIFR 410
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF+ E ++ AL L+ V FVP + + + RP WCISRQRVWGVPIPV
Sbjct: 411 ATEQWFVKAEGSDLRERALKALDNVEFVPAWGRNRIGSMLETRPDWCISRQRVWGVPIPV 470
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFW 1254
FY+ +T I N+ + ++ + G W
Sbjct: 471 FYNEETGKEIYNKEILARIVEIVKKEGTAAW 501
>gi|423615841|ref|ZP_17591675.1| isoleucyl-tRNA synthetase [Bacillus cereus VD115]
gi|401260378|gb|EJR66551.1| isoleucyl-tRNA synthetase [Bacillus cereus VD115]
Length = 921
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 322/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTIKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYVPG 771
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTIKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|255322407|ref|ZP_05363553.1| isoleucyl-tRNA synthetase [Campylobacter showae RM3277]
gi|255300780|gb|EET80051.1| isoleucyl-tRNA synthetase [Campylobacter showae RM3277]
Length = 918
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 231/676 (34%), Positives = 349/676 (51%), Gaps = 76/676 (11%)
Query: 389 TERIKPEALVCKTVGNILGR-VGITHDRP-------GTALAESELEYKPDHISKSIYLKI 440
T + K EA + KT+ + R + I +P +ALAE+E+EY+ D SIY+
Sbjct: 157 TMKFKFEAEIYKTLCKVAKRGLLIERSKPVYWSWAARSALAEAEVEYE-DKEDYSIYVAF 215
Query: 441 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 500
KL + A + GA D A+IWTTTPW+LPANQ I+ NP Y + + N+I AK ++
Sbjct: 216 KLGEEAAAKI-GAKDARAVIWTTTPWTLPANQAISLNPNEIYVLTA---ENLIFAKEMLS 271
Query: 501 NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 560
L+ T +++ +F L+++ I+P+N R + V+ GTGLVH AP H
Sbjct: 272 ELEKEGLTKGEILKEFAAAELENLHAINPLN--SRKSLFILGDHVTMDGGTGLVHTAPGH 329
Query: 561 GQDDFLLALAEKIPVLNLITNQGKYS---------PDA-GPGLEGLNILGDGKDQVLHLV 610
G+DD+ ++L I V+ + G Y PD L G++I +++L L+
Sbjct: 330 GEDDYHVSLKYGIEVIMPVDEGGLYDETLKAKKLFPDGVADELIGMHIFK-ANEKILELL 388
Query: 611 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE-------ALACLEEVNFV 663
++L + HSYP+ WRT KPVI +A++QWFI + K E AL LE V F
Sbjct: 389 GSNLLKVSKFVHSYPFCWRTHKPVIYRATKQWFIAMDEPKIEGKTLREVALKELENVKFY 448
Query: 664 PESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGP 721
P S K + I RP WCISRQR WGVPI F DT I ++ + + + ++ G
Sbjct: 449 PASGVKRIGSMIENRPDWCISRQRDWGVPIAFFRHKDTKEPIFDDEILDNVAAIFEQKGA 508
Query: 722 DFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-------PAHVYM 772
D WW ++ LL N N+ K DILD+WFDSG +W+ VLK PA +Y+
Sbjct: 509 DAWWDSEIKDLLPANCKYEPQNLEKVMDILDVWFDSGSTWAAVLKSGDYDAGSYPADMYL 568
Query: 773 EGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGA 832
EG DQ GWF SSLL S A + AP+R+V HGF VDE G KMSKS GNV++ D+ +
Sbjct: 569 EGSDQHRGWFQSSLLLSCAAQGRAPYRSVLTHGFTVDENGQKMSKSKGNVVAPADVAK-- 626
Query: 833 KKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQD 892
YGV++LR WVA + + I +NIL +
Sbjct: 627 ---------------------------TYGVEILRLWVAL-SDYSSDLKISENILKQVSE 658
Query: 893 DVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRV 952
+KIR+++R+LL +++ + S +D ++L R + + + + + +++ +
Sbjct: 659 QYRKIRNTIRFLLANVNDLEDIETSNFNILDRWILSRAKKTFDETEAAFRNYDFSKGFSL 718
Query: 953 LLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV 1012
L+NF+ +LS Y + KDRLYCD+ + + R S + I LL +AP + + +E
Sbjct: 719 LMNFLSADLSGIYLDICKDRLYCDAKDSDTRRSAQSAMALITRALLPLIAPTLTYTVDEA 778
Query: 1013 YSHLPS--RQGTFSSF 1026
+ P + G +F
Sbjct: 779 MDYAPKIIKNGAADAF 794
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 224/399 (56%), Gaps = 28/399 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA---I 77
F LHDGPPYANG HIGHA+NK LKDI +++ G+ V + PGWDCHGLPIE + +
Sbjct: 52 FTLHDGPPYANGNIHIGHALNKTLKDIIAKTHYFFGENVRFTPGWDCHGLPIEQQVEVKL 111
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH---NCYHTFDKEYVKNQL 134
K K LS IR+ + A E I+ QK F+ GV +DW+ F+ E K L
Sbjct: 112 GDKKKSLSKTQIRELCREHAREFIDVQKESFKQLGVASDWDDPYLTMKFKFEAEIYKT-L 170
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
C+ + K+ + KPVYWS ++R+ALAE+E+EY+ D SIY+ KL + A +
Sbjct: 171 CK---VAKRGLLIERSKPVYWSWAARSALAEAEVEYE-DKEDYSIYVAFKLGEEAAAKI- 225
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIE 254
GA D A+IWTTTPW+LPANQ I+ NP Y + + N+I AK ++ L+ T E
Sbjct: 226 GAKDARAVIWTTTPWTLPANQAISLNPNEIYVLTA---ENLIFAKEMLSELEKEGLTKGE 282
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
++ +F L+++ I+P+N R + V+ GTGLVH AP HG+DD+ ++L
Sbjct: 283 ILKEFAAAELENLHAINPLN--SRKSLFILGDHVTMDGGTGLVHTAPGHGEDDYHVSLKY 340
Query: 315 KIPVLNLITNQGKYS---------PDA-GPGLEGLNILGDGKDQVLHLVEPDVLWTENYQ 364
I V+ + G Y PD L G++I +++L L+ ++L +
Sbjct: 341 GIEVIMPVDEGGLYDETLKAKKLFPDGVADELIGMHIFK-ANEKILELLGSNLLKVSKFV 399
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVG 403
HSYP+ WRT KPVI +A++QWFI + K E + V
Sbjct: 400 HSYPFCWRTHKPVIYRATKQWFIAMDEPKIEGKTLREVA 438
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 11/160 (6%)
Query: 1114 KYSPDA-GPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQW 1172
K PD L G++I + +++L L+ ++L + HSYP+ WRT KPVI +A++QW
Sbjct: 362 KLFPDGVADELIGMHIF-KANEKILELLGSNLLKVSKFVHSYPFCWRTHKPVIYRATKQW 420
Query: 1173 FIDTERIKPE-------ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
FI + K E AL LE V F P S K + I RP WCISRQR WGVPI
Sbjct: 421 FIAMDEPKIEGKTLREVALKELENVKFYPASGVKRIGSMIENRPDWCISRQRDWGVPIAF 480
Query: 1226 FYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F DT I ++ + + + ++ G D WW ++ LL
Sbjct: 481 FRHKDTKEPIFDDEILDNVAAIFEQKGADAWWDSEIKDLL 520
>gi|52080145|ref|YP_078936.1| isoleucyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319646076|ref|ZP_08000306.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
gi|404489033|ref|YP_006713139.1| isoleucyl-tRNA ligase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|81825316|sp|Q65JV7.1|SYI_BACLD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|52003356|gb|AAU23298.1| isoleucyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348023|gb|AAU40657.1| isoleucyl-tRNA ligase IleS [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391826|gb|EFV72623.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
Length = 922
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + L G +IWTTTPW++PAN IA +
Sbjct: 192 SALAEAEIEYH-DKRSPSIYVAFDVKDGKGVLTNGEK---IVIWTTTPWTIPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV + GA ++A L+E++ K D +VV G+ L+ I +HP+ RD
Sbjct: 248 PELEYSVVAAGGARYVMASALIESVAKAIGFEDHEVVQTVKGKDLEHIVAVHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EGL
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGHMTSEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP I +A+ QWF + + E L
Sbjct: 365 FYDQANKPITEQLEEKGALLKLDFITHSYPHDWRTKKPTIFRATAQWFASIKDFRDELLE 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+++ +VPE + L + I R WCISRQR WGVPIPVFY +G+ II +E I H
Sbjct: 425 AVKKTKWVPEWGETRLYNMIRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TINHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ +LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFREHGSNIWFEKEANELLPEGFTHPGSPNGKFTKEQDIMDVWFDSGSSHQAVLEERED 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SS+ T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSISTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSLGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V +
Sbjct: 604 -----------VPA------------------KIMNQFGADILRLWVAS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G + + + +I+ R VD Y+L +L +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNIADFDPAKDAIAVEDLREVDQYILIKLNSLIEKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+ +A + NF ELS+FY KD +Y + + + R S + L++
Sbjct: 694 AYEEYDFAVIYHAVHNFCAIELSSFYMDFAKDVVYIEHADHKDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+API+PH A+E++SH
Sbjct: 754 LIAPILPHTADEMWSHF 770
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/397 (42%), Positives = 229/397 (57%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++YS ++ G+P F+LHDGPPYANG H+GHA+NK+LKD +RS + G YVPGW
Sbjct: 35 DIYSLVQKRTEGRPMFVLHDGPPYANGDIHMGHALNKVLKDFIVRSRSMSGYHAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K ++ + RK + +A + I QKA+F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMTVAEFRKLCEEYAWQQIEGQKAQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 154 VTLKPEFEAQQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYH-DKRSPSIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN IA +P LEYSV + GA ++A L+
Sbjct: 213 FDVKDGKGVLTNGEK---IVIWTTTPWTIPANLGIAVHPELEYSVVAAGGARYVMASALI 269
Query: 243 ESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES+ K D EVV G+ L+ I +HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ESVAKAIGFEDHEVVQTVKGKDLEHIVAVHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++ + VL + +G + +A PG EGL K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGHMTSEA-PGFEGLFYDQANKPITEQLEEKGALLKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKP I +A+ QWF + + E L
Sbjct: 387 DFITHSYPHDWRTKKPTIFRATAQWFASIKDFRDELL 423
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ +G + +A PG EGL K L E L ++ HSYP+DWRTKKP I +
Sbjct: 348 VDEKGHMTSEA-PGFEGLFYDQANKPITEQLEEKGALLKLDFITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + E L ++ +VPE + L + I R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKDFRDELLEAVKKTKWVPEWGETRLYNMIRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ +LL
Sbjct: 467 AENGEPIITDE-TINHVSELFREHGSNIWFEKEANELL 503
>gi|229075653|ref|ZP_04208635.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|228707429|gb|EEL59620.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
Length = 921
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 322/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + +VV G L+ HP +RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWEKAEVVKTVKGSELEYTVAKHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYVPG 771
Score = 283 bits (723), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + EVV G L+ HP +RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWEKAEVVKTVKGSELEYTVAKHPFY--ERDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|363749715|ref|XP_003645075.1| hypothetical protein Ecym_2538 [Eremothecium cymbalariae DBVPG#7215]
gi|356888708|gb|AET38258.1| Hypothetical protein Ecym_2538 [Eremothecium cymbalariae DBVPG#7215]
Length = 996
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 334/650 (51%), Gaps = 72/650 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-----ATDL--HALIWTTTPWSLPA 470
TALAE ELEYK DH+S + Y+K L+ L TDL + L+WT+TPW+L +
Sbjct: 217 TALAEGELEYKVDHVSTAAYIKFSLSNESCTALRKQFPSLGTDLPINCLVWTSTPWTLFS 276
Query: 471 NQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
N I +N LEYS+ + +IV L + L W V+ + G L + YI+ +
Sbjct: 277 NMAICYNKGLEYSLIKLSEEILIVESNLWKTLAWGDSEVPVVISEIKGTNLHGLRYINSL 336
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
K+ LL V+ GTGLVH AP HG DD+L+++A + V + + ++G+Y +
Sbjct: 337 MKDGVSRPLLHGDHVTKHTGTGLVHTAPGHGHDDYLVSVAHGLEVYSPVDHKGRYKLNEL 396
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--------------VLWTENYQHSYPYDWRTKKPVIL 636
P IL D + + +++ + +L++ Y+HSYPYDWR+KKPVI+
Sbjct: 397 PPYLR-EILKDSDGRPMKVLDRNTTTTILLLLKRNGMLLYSHEYKHSYPYDWRSKKPVII 455
Query: 637 KASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVF 696
+++ QWF D ++ +L L+ V FVP L I R WCISRQR WGVPIPV
Sbjct: 456 RSTPQWFADLRDVRSLSLKSLDNVTFVPSRGYNRLSSFIRGRTEWCISRQRSWGVPIPVL 515
Query: 697 Y---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSV-EQLLN-----TSDVNSNVTKSND 747
Y + D ++VN+ I H I E G D W+ S E +++ DV + D
Sbjct: 516 YRIDNPDEMLVNDEIISHIIETIAEKGIDSWFMESCPENMIDWLPSKYKDVAHLYFRGKD 575
Query: 748 ILDIWFDSGISWSHV---------LKDKP---AHVYMEGMDQINGWFMSSLLTSVAL--K 793
+D+WFDSG SW+ + LK P ++VY+EG DQ GWF SSLLT VA K
Sbjct: 576 TIDVWFDSGSSWNVISRWYKNTLGLKKLPEPLSNVYLEGSDQHRGWFQSSLLTRVAALGK 635
Query: 794 HTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQ 853
+ PF V HGF +D G KMSKS+GNVI I G K
Sbjct: 636 ESTPFGAVVTHGFTLDGDGMKMSKSLGNVILPSSIILGDKN------------------- 676
Query: 854 GAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSE 913
+ LP+ GVD LR V A A + ++N + ++K R +LR++LG L SE
Sbjct: 677 --RNLPSLGVDGLRLLV-AQADFTSDIVASSTVINHVAESLKKFRLTLRFILGNLQ-ESE 732
Query: 914 STGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLV 969
+ + R VD+Y+L +L + + LY F + + L + N LSAFYF ++
Sbjct: 733 TFNLLPFEKLRPVDLYVLSKLQDLNKSSKDLYDNFNFCKVLTDLQYHMNNNLSAFYFDII 792
Query: 970 KDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
KD LYCDS R TL +IF V +API+P + +E ++HLP +
Sbjct: 793 KDSLYCDSSTALKRQQIQTTLFHIFDVYRAILAPIIPVMVQEAWNHLPKQ 842
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 240/409 (58%), Gaps = 28/409 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
F+LHDGPPYANG H+GHA+NKILKDIT R LL+GK V Y PGWDCHGLPIE+KA+
Sbjct: 75 FVLHDGPPYANGDLHLGHALNKILKDITNRHQLLEGKYVFYKPGWDCHGLPIEIKALQKL 134
Query: 80 KDKL--LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
D + +S +R A +ALET+ TQ +F+ + ++ +W+ + Y T D+ + +QL
Sbjct: 135 SDDVSNISATKVRSVASKYALETVKTQMEQFQKFAIMTNWD-DPYITMDRTFELDQLRVL 193
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG-- 195
N++ + I R KPVYW ++TALAE ELEYK DHVS + Y+K L+ L
Sbjct: 194 QNMFSRGLIRRQRKPVYWGTETQTALAEGELEYKVDHVSTAAYIKFSLSNESCTALRKQF 253
Query: 196 ---ATDL--HALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQ 250
TDL + L+WT+TPW+L +N I +N LEYS+ + +IV L ++L W
Sbjct: 254 PSLGTDLPINCLVWTSTPWTLFSNMAICYNKGLEYSLIKLSEEILIVESNLWKTLAWGDS 313
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
V+ + G L + YI+ + K+ LL V+ GTGLVH AP HG DD+L+
Sbjct: 314 EVPVVISEIKGTNLHGLRYINSLMKDGVSRPLLHGDHVTKHTGTGLVHTAPGHGHDDYLV 373
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-------------- 356
++A + V + + ++G+Y + P IL D + + +++ +
Sbjct: 374 SVAHGLEVYSPVDHKGRYKLNELPPYLR-EILKDSDGRPMKVLDRNTTTTILLLLKRNGM 432
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+L++ Y+HSYPYDWR+KKPVI++++ QWF D ++ +L K++ N+
Sbjct: 433 LLYSHEYKHSYPYDWRSKKPVIIRSTPQWFADLRDVR--SLSLKSLDNV 479
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 1144 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRD 1203
+L++ Y+HSYPYDWR+KKPVI++++ QWF D ++ +L L+ V FVP L
Sbjct: 433 LLYSHEYKHSYPYDWRSKKPVIIRSTPQWFADLRDVRSLSLKSLDNVTFVPSRGYNRLSS 492
Query: 1204 QIAQRPYWCISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWW 1255
I R WCISRQR WGVPIPV Y + D ++VN+ I H I E G D W+
Sbjct: 493 FIRGRTEWCISRQRSWGVPIPVLYRIDNPDEMLVNDEIISHIIETIAEKGIDSWF 547
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 1025 SFCHFKVYLQYSGS---------IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPI 1075
+FC LQY + I K LYCDS R TL +IF V +API
Sbjct: 768 NFCKVLTDLQYHMNNNLSAFYFDIIKDSLYCDSSTALKRQQIQTTLFHIFDVYRAILAPI 827
Query: 1076 MPHLAEEVYSHLPSR 1090
+P + +E ++HLP +
Sbjct: 828 IPVMVQEAWNHLPKQ 842
>gi|229117392|ref|ZP_04246768.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|423378252|ref|ZP_17355536.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|423441373|ref|ZP_17418279.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|423448401|ref|ZP_17425280.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|423533789|ref|ZP_17510207.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|423540955|ref|ZP_17517346.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|423547193|ref|ZP_17523551.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|423623025|ref|ZP_17598803.1| isoleucyl-tRNA synthetase [Bacillus cereus VD148]
gi|228666002|gb|EEL21468.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|401128995|gb|EJQ36678.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|401172143|gb|EJQ79364.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|401178914|gb|EJQ86087.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401259798|gb|EJR65972.1| isoleucyl-tRNA synthetase [Bacillus cereus VD148]
gi|401636518|gb|EJS54272.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|402418034|gb|EJV50334.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|402464008|gb|EJV95708.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB2-9]
Length = 921
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 322/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + +VV G L+ HP +RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWEKAEVVKTVKGSELEYTVAKHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYVPG 771
Score = 283 bits (723), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + EVV G L+ HP +RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWEKAEVVKTVKGSELEYTVAKHPFY--ERDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|254455824|ref|ZP_05069253.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082826|gb|EDZ60252.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
Length = 896
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 345/643 (53%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EY+ DH S +IY + LEG+ +IWTTTPW++PAN+ +A+N
Sbjct: 180 TALADAEVEYQ-DHKSDTIYTSFPVKSSNIKELEGS---EVVIWTTTPWTIPANKALAYN 235
Query: 478 PALEYSV------ASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
+L+Y + + +++A+ L+E+ +K + + F G+ L+D HP
Sbjct: 236 QSLDYVLIQLNDEGDFQNRKIVIAEALLESVIKDCSIENYQEIKKFKGKDLKDTICKHPF 295
Query: 531 NK--EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
+ D+ +L A FV++ +GTG+VHCAP+HG DDF L L I + + GKY+ +
Sbjct: 296 FNLGYEYDIPMLEARFVTTEQGTGIVHCAPSHGPDDFNLCLNNGIKAIETVDGDGKYTSN 355
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTE 647
EG +I + L E L + HSYP+ WR+K P++ +A+ QWFI E
Sbjct: 356 VQL-FEGNHIFKANPIVIEKLKEQKKLLSNGELIHSYPHSWRSKAPLVHRATPQWFISME 414
Query: 648 --RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--II 703
+++ AL L+E F P K+ LR I RP WC+SRQRVWGVP+P+F + T I+
Sbjct: 415 SHKLREIALKALDETTFYPSKGKERLRSMIETRPDWCVSRQRVWGVPLPIFVNKKTKEIL 474
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
V++ + + + G D W+S ++ L + + K +DI+++WFDSG + S VL
Sbjct: 475 VDDEVNETIANIYEIEGSDCWFSDDPQRFLGKKYKSEDYEKLSDIVEVWFDSGSTHSFVL 534
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ + PA +Y+EG DQ GWF SSLL S + APF ++ HGFVVD KG KMSKS
Sbjct: 535 EKREDLKWPASMYLEGSDQHRGWFHSSLLESCGTRGRAPFESILSHGFVVDGKGLKMSKS 594
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI+ DI L YG D+LR WVA+ ++
Sbjct: 595 LGNVIAPEDI-----------------------------LKKYGADILRIWVAS-SNYAE 624
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG----SISRY--VDVYMLKRLCE 932
+ I +IL+ + +KIR++ RYLLG L+++ E ++S ++ +ML ++
Sbjct: 625 DLRIDHSILDQHAESYRKIRNTFRYLLGNLNDNFEKIDLQKINLSELPELEKFMLHKIYV 684
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + + + + LLNF +LSAFYF + KD LYCD I+ + R S + L+
Sbjct: 685 LNSNFKNYFKNYDFHNLYKELLNFCTVDLSAFYFDIRKDTLYCDPIDSKKRQSTIILLNV 744
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQY 1035
I + LLR API+ EE+Y + + + H + +L Y
Sbjct: 745 ILNSLLRWFAPILSFTTEEIYKLIYNNNNSI----HLESFLNY 783
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 241/443 (54%), Gaps = 33/443 (7%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY R + GK +F+LHDGPPYANG H+G A+NKILKDI ++ + + GK YVPGWD
Sbjct: 21 LYDELRNSSKGKEKFVLHDGPPYANGNIHMGTALNKILKDIIVKFHQMDGKDSIYVPGWD 80
Query: 67 CHGLPIELK------AITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
CHGLPIE K + ++ RK+ ++FA + I K++F+ GV+ DWE N
Sbjct: 81 CHGLPIEWKIEEQYKKNKKNKNEVPIVEFRKECRSFAEKWIEVHKSQFKRLGVIGDWE-N 139
Query: 121 CYHT--FDKE-YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
Y T FD E + +L +F K+ +YR KPV WS +TALA++E+EY+ DH S
Sbjct: 140 YYSTMSFDAEAQIVRELGKF---LKEGSLYRGFKPVLWSTVEKTALADAEVEYQ-DHKSD 195
Query: 178 SIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV------ASVK 231
+IY + LEG+ +IWTTTPW++PAN+ +A+N +L+Y + +
Sbjct: 196 TIYTSFPVKSSNIKELEGS---EVVIWTTTPWTIPANKALAYNQSLDYVLIQLNDEGDFQ 252
Query: 232 GANVIVAKCLVES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINK--EQRDLKLLPAGFV 288
+++A+ L+ES +K + + + F G+ L+D HP + D+ +L A FV
Sbjct: 253 NRKIVIAEALLESVIKDCSIENYQEIKKFKGKDLKDTICKHPFFNLGYEYDIPMLEARFV 312
Query: 289 SSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ 348
++ +GTG+VHCAP+HG DDF L L I + + GKY+ + EG +I
Sbjct: 313 TTEQGTGIVHCAPSHGPDDFNLCLNNGIKAIETVDGDGKYTSNVQL-FEGNHIFKANPIV 371
Query: 349 VLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILG 407
+ L E L + HSYP+ WR+K P++ +A+ QWFI E K + K +
Sbjct: 372 IEKLKEQKKLLSNGELIHSYPHSWRSKAPLVHRATPQWFISMESHKLREIALKALDET-- 429
Query: 408 RVGITHDRPGTALAESELEYKPD 430
+ G S +E +PD
Sbjct: 430 ---TFYPSKGKERLRSMIETRPD 449
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
HSYP+ WR+K P++ +A+ QWFI E +++ AL L+ F P K+ LR I RP
Sbjct: 389 HSYPHSWRSKAPLVHRATPQWFISMESHKLREIALKALDETTFYPSKGKERLRSMIETRP 448
Query: 1210 YWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WC+SRQRVWGVP+P+F + T I+V++ + + + G D W+S ++ L
Sbjct: 449 DWCVSRQRVWGVPLPIFVNKKTKEILVDDEVNETIANIYEIEGSDCWFSDDPQRFL 504
>gi|229134705|ref|ZP_04263514.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|228648751|gb|EEL04777.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
Length = 921
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 331/643 (51%), Gaps = 56/643 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL +T N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHTGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLH--NHSESTGSIS--RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L N SE+T ++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVPVAELREVDRYMLVKLNDLITKVKD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + + R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
V PI+PH A+EV+ ++P + + + GS A R
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEATEVEGSEALR 795
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|226313405|ref|YP_002773299.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|254782371|sp|C0ZG86.1|SYI_BREBN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|226096353|dbj|BAH44795.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 925
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 221/621 (35%), Positives = 328/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EYK D S SIY+ ++ L + +IWTTTPW+LPAN I+ +
Sbjct: 192 TALADAEIEYK-DKRSPSIYVSFQVADGKGKL---DIETGVVIWTTTPWTLPANLAISLH 247
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P LEY+V V G +VA L+E + W ++++ F GQ L+ + HP
Sbjct: 248 PELEYNVVKVDGRKFLVANGLIEAASKEIGWE---GVEILATFKGQELEGVETQHPFY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R L+ V+ GTG VH AP HG+DDF + + VL + ++GK + +A PG
Sbjct: 303 DRKSPLILGEHVTLDAGTGCVHTAPGHGEDDFNVGQKYNLGVLCPVDHEGKMTNEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L ++ HSYP+DWRTKKPVI +A++QWF + + +
Sbjct: 362 EGLFYEDANKVITEKLKENGALLKLSFFTHSYPHDWRTKKPVIYRATEQWFASIDGFRTQ 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++ V ++P + L + IA R WCISRQRVWGVPIP+FY + I+N+ I
Sbjct: 422 MLEAIKNVKWIPHWGETRLANMIADRGDWCISRQRVWGVPIPIFYCKACNEPIINDTTIN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQL----LNTSDVNSN-VTKSNDILDIWFDSGISWSHVLKD 765
H L + G W+S +L L+ + + N K DI+D+WFDSG S VL++
Sbjct: 482 HVADLFRKEGSKVWFSREANELVPEGLSCTKCDCNDFRKETDIMDVWFDSGSSHQAVLRE 541
Query: 766 K----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+ PA +Y+EG DQ GWF SSL T VA+ TAP+++V HGF +D +G KMSKS+GN
Sbjct: 542 RGIAWPADMYLEGSDQYRGWFNSSLSTGVAVYGTAPYKSVLSHGFALDGEGRKMSKSLGN 601
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+LR WVA+ V
Sbjct: 602 VIVPQQV-----------------------------IDKMGADILRLWVAS-VDYQADVR 631
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I ILN + +KIR++ R+LLG L + +T ++ +D Y+L + +
Sbjct: 632 ISDAILNQIAEVYRKIRNTFRFLLGNLDGFNPATDRVAYEELGELDRYVLAKAAKVAKRT 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+Q+ + NF V +LSAFY + KDRLY ++ + R + +++ L
Sbjct: 692 RKAYDEYQFHTVFHAVHNFCVIDLSAFYLDICKDRLYVEAPDSLKRRAAQTVMYDCLLSL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPS 1018
++ VAP++PH A+EV++ +P
Sbjct: 752 VKLVAPLLPHTADEVWAFIPG 772
Score = 279 bits (714), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 222/385 (57%), Gaps = 13/385 (3%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI 77
+P F+LHDGPPYANG HIGHA+NKILKD +R + G Y+PGWD HGLPIE I
Sbjct: 47 RPSFVLHDGPPYANGDIHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQAII 106
Query: 78 TSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQL 134
++ + + D R++ + +A I+ Q+ +F+ GV DWE N Y T EY NQ+
Sbjct: 107 NAQGLDRRSIEVNDFRQRCEEYAWSYIDKQRDQFKRLGVRGDWE-NPYVTLLPEYEANQI 165
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
F + K+ YIY+ L+ VYWSPSS TALA++E+EYK D S SIY+ ++ L
Sbjct: 166 RVFGEMAKKGYIYKGLRCVYWSPSSETALADAEIEYK-DKRSPSIYVSFQVADGKGKL-- 222
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL-KWTFQTDI 253
+ +IWTTTPW+LPAN I+ +P LEY+V V G +VA L+E+ K +
Sbjct: 223 -DIETGVVIWTTTPWTLPANLAISLHPELEYNVVKVDGRKFLVANGLIEAASKEIGWEGV 281
Query: 254 EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 313
E++ F GQ L+ + HP R L+ V+ GTG VH AP HG+DDF +
Sbjct: 282 EILATFKGQELEGVETQHPFY--DRKSPLILGEHVTLDAGTGCVHTAPGHGEDDFNVGQK 339
Query: 314 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWR 372
+ VL + ++GK + +A PG EGL K L E L + + HSYP+DWR
Sbjct: 340 YNLGVLCPVDHEGKMTNEA-PGFEGLFYEDANKVITEKLKENGALLKLSFFTHSYPHDWR 398
Query: 373 TKKPVILKASQQWFIDTERIKPEAL 397
TKKPVI +A++QWF + + + L
Sbjct: 399 TKKPVIYRATEQWFASIDGFRTQML 423
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHS 1153
F V NL + ++GK + +A PG EGL K L E L ++ HS
Sbjct: 334 FNVGQKYNLGVLCPVDHEGKMTNEA-PGFEGLFYEDANKVITEKLKENGALLKLSFFTHS 392
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YP+DWRTKKPVI +A++QWF + + + L ++ V ++P + L + IA R WCI
Sbjct: 393 YPHDWRTKKPVIYRATEQWFASIDGFRTQMLEAIKNVKWIPHWGETRLANMIADRGDWCI 452
Query: 1214 SRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQRVWGVPIP+FY + I+N+ I H L + G W+S +L+
Sbjct: 453 SRQRVWGVPIPIFYCKACNEPIINDTTINHVADLFRKEGSKVWFSREANELV 504
>gi|312111749|ref|YP_003990065.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|336236132|ref|YP_004588748.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|423720665|ref|ZP_17694847.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidans TNO-09.020]
gi|311216850|gb|ADP75454.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|335362987|gb|AEH48667.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|383366018|gb|EID43309.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidans TNO-09.020]
Length = 923
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 230/624 (36%), Positives = 329/624 (52%), Gaps = 62/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +L+G D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKDGKG-VLDG--DEKIVIWTTTPWTIPANLAIAVH 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L+Y V GA + + + + W D+ VV G+ L+ + HP
Sbjct: 247 PDLDYQVVETNGAKYVVAAALLASVAKEIGWD---DVTVVKTIKGKDLEYVVAKHPFY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD ++ V++ GTG VH AP HG+DDF++ + VL + +G Y PG
Sbjct: 302 DRDSLVVCGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLDVLCPVDERG-YMTSEAPGF 360
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L ++ HSYP+DWRTKKP I +A+ QWF ++I+ E
Sbjct: 361 EGLFYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKKPTIFRATTQWFASIDKIRGE 420
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++E ++PE + + + I R WCISRQR WGVPIPVFY +G+ II +E I+
Sbjct: 421 LLQAIKETKWIPEWGEIRIHNMIRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TIE 479
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L ++G + W+ + LL + S N TK DI+D+WFDSG S VL +
Sbjct: 480 HVSNLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGIFTKETDIMDVWFDSGSSHQAVLVE 539
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+G
Sbjct: 540 RDDLQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKAVLSHGFVLDGEGRKMSKSLG 599
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV+ +PA K + G D+LR WVA+ V
Sbjct: 600 NVV-----------VPA------------------KVMEQLGADILRLWVAS-VDYQADV 629
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
I +IL + +KIR++ R++LG L + + T ++ R VD YML +L
Sbjct: 630 RISDSILKQVAEVYRKIRNTFRFMLGNLFDFNPETDAVPVNELREVDRYMLVKLNRLIEK 689
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y + +A + NF +LSAFY KD LY ++ N AR S L+
Sbjct: 690 VKQAYETYDFASIYHDVNNFCTVDLSAFYLDFAKDILYIEAPNDRARRSIQTVLYEAVVA 749
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQ 1020
L + VAPI+PH AEEV+ H+P+R+
Sbjct: 750 LTKLVAPILPHTAEEVWEHIPNRK 773
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/400 (41%), Positives = 227/400 (56%), Gaps = 20/400 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKILKDI +R + G YVPGW
Sbjct: 35 DIYRKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYCAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE A+T K K +S + RK + +A E IN Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIET-ALTKKGVDRKSMSVAEFRKLCEQYAYEQINNQREQFKRLGVRGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 153 ITLTREYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
+ +L+G D +IWTTTPW++PAN IA +P L+Y V GA +
Sbjct: 212 FPVKDGKG-VLDG--DEKIVIWTTTPWTIPANLAIAVHPDLDYQVVETNGAKYVVAAALL 268
Query: 239 KCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
+ + + W D+ VV G+ L+ + HP RD ++ V++ GTG VH
Sbjct: 269 ASVAKEIGW---DDVTVVKTIKGKDLEYVVAKHPFY--DRDSLVVCGEHVTTDAGTGCVH 323
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DDF++ + VL + +G Y PG EGL K L E L
Sbjct: 324 TAPGHGEDDFIVGQKYGLDVLCPVDERG-YMTSEAPGFEGLFYDEANKAITQKLEEVGAL 382
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKP I +A+ QWF ++I+ E L
Sbjct: 383 LKLSFITHSYPHDWRTKKPTIFRATTQWFASIDKIRGELL 422
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Query: 1111 NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKAS 1169
++ Y PG EGL K L E L ++ HSYP+DWRTKKP I +A+
Sbjct: 348 DERGYMTSEAPGFEGLFYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKKPTIFRAT 407
Query: 1170 QQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-- 1227
QWF ++I+ E L ++ ++PE + + + I R WCISRQR WGVPIPVFY
Sbjct: 408 TQWFASIDKIRGELLQAIKETKWIPEWGEIRIHNMIRDRGDWCISRQRAWGVPIPVFYGE 467
Query: 1228 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 468 NGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 502
>gi|423470109|ref|ZP_17446853.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6O-2]
gi|402437361|gb|EJV69385.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6O-2]
Length = 921
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 225/641 (35%), Positives = 331/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ +V I+A L E ++ T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVNVNDEKYIIASELFETVEKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I +
Sbjct: 424 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISNVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + ++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPGENKVAAAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N + R + L+++ L +
Sbjct: 693 AYEAYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + + ++ G+ A
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEVVEVDGAEA 793
Score = 283 bits (723), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 232/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ +V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVNVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVEKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L +E +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I + L EHG + W+ + LL
Sbjct: 475 DE-TISNVADLFREHGSNVWFEREAKDLL 502
>gi|423612110|ref|ZP_17587971.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD107]
gi|401247117|gb|EJR53461.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD107]
Length = 921
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 226/641 (35%), Positives = 330/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L + + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFDTVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTSEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I +
Sbjct: 424 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISYVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + S ++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVVAAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 693 AYEAYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHHDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + + ++ G+ A
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEVVEVDGAEA 793
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L +
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFD 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFLVGKKYGLEVLCPVDDKGVLTSEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTSEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L +E +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I + L EHG + W+ + LL
Sbjct: 466 AENGDPIITDE-TISYVADLFREHGSNVWFEREAKDLL 502
>gi|452974554|gb|EME74374.1| isoleucyl-tRNA ligase [Bacillus sonorensis L12]
Length = 920
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 224/617 (36%), Positives = 327/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN IA +
Sbjct: 192 SALAEAEIEYQ-DKRSPSIYVAFDVKDGKGVLTNGEK---IVIWTTTPWTIPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV + G+ ++A LVE++ K + +VV G+ L+ I +HP+ RD
Sbjct: 248 PDLEYSVVAEGGSRYVIASALVESVAKAVGFENPEVVQTVKGKDLEHIVAVHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EGL
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGNMTSEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP I +A+ QWF + + E L
Sbjct: 365 FYDQANKPITEKLEENGALLKLDFITHSYPHDWRTKKPTIFRATAQWFASIKDFRNELLE 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE + L + I R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AVKETKWVPEWGETRLYNMIRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIQHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ +LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 DLFREHGSNIWFEKEANELLPEGFTHPGSPNGKFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SS+ T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSISTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSLGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V +
Sbjct: 604 -----------VPA------------------KIMNQFGADILRLWVAS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G + + + +++ R VD YML +L +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNIADFDPAKDAVAVEDLREVDQYMLIKLNNVIEKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+ +A + NF ELSAFY KD +Y + + + R S + L++
Sbjct: 694 AYEEYDFAVIYHTVHNFCAIELSAFYMDFAKDVVYIEHADHKDRRSMQTVFYETLVALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
VAPI+ H A+E++SH
Sbjct: 754 LVAPILAHTADEMWSHF 770
Score = 293 bits (750), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/397 (42%), Positives = 230/397 (57%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y ++ G+P F+LHDGPPYANG H+GHA+NK+LKD +RS + G YVPGW
Sbjct: 35 DIYRLVQQRTEGRPMFVLHDGPPYANGDIHMGHALNKVLKDFIVRSRSMSGYHAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K ++ + RK + +A + I QKA+F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMTVAEFRKLCEEYAWQQIEGQKAQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEFEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSPSIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN IA +P LEYSV + G+ ++A LV
Sbjct: 213 FDVKDGKGVLTNGE---KIVIWTTTPWTIPANLGIAVHPDLEYSVVAEGGSRYVIASALV 269
Query: 243 ESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES+ K + EVV G+ L+ I +HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ESVAKAVGFENPEVVQTVKGKDLEHIVAVHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++ + VL + +G + +A PG EGL K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGNMTSEA-PGFEGLFYDQANKPITEKLEENGALLKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKP I +A+ QWF + + E L
Sbjct: 387 DFITHSYPHDWRTKKPTIFRATAQWFASIKDFRNELL 423
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ +G + +A PG EGL K L E L ++ HSYP+DWRTKKP I +
Sbjct: 348 VDEKGNMTSEA-PGFEGLFYDQANKPITEKLEENGALLKLDFITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + E L ++ +VPE + L + I R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKDFRNELLEAVKETKWVPEWGETRLYNMIRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L EHG + W+ +LL
Sbjct: 467 AENGEPIITDE-TIQHVSDLFREHGSNIWFEKEANELL 503
>gi|254567794|ref|XP_002491007.1| Mitochondrial isoleucyl-tRNA synthetase, null mutant is deficient in
respiratory growth [Komagataella pastoris GS115]
gi|238030804|emb|CAY68727.1| Mitochondrial isoleucyl-tRNA synthetase, null mutant is deficient in
respiratory growth [Komagataella pastoris GS115]
gi|328352461|emb|CCA38860.1| isoleucyl-tRNA synthetase [Komagataella pastoris CBS 7435]
Length = 1020
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 224/635 (35%), Positives = 336/635 (52%), Gaps = 58/635 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIA 475
TALAE ELEY H S +IYLK ++ L ++ LIWTTTPW++ AN+ ++
Sbjct: 256 ATALAEGELEYNDSHNSTAIYLKFPVDTTDLKELSSLGNKVNLLIWTTTPWTIVANKAVS 315
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
N L+Y++ + +IVA L + + + D G L TYI+ + +
Sbjct: 316 VNSKLDYTILKHQSEYLIVALDLASQVMSSKEGIEDTKIHLSGAQLLKTTYINSLTGGVK 375
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD---AGPG 592
+L V++ GTGLVH AP HG DD+ + L I + + + G+Y+PD +
Sbjct: 376 Q-PILDGDHVTNVAGTGLVHTAPGHGNDDYWVCLKNDIAPYSPVDSFGRYTPDVPESCKD 434
Query: 593 LEGLNILGDGKDQVLH-LVEPDVLWT--ENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
L GL++L +G +V+ L +++ +NY HSYPYDWR+KKP+I++++ QWFI+ ++I
Sbjct: 435 LIGLHVLKEGAPKVVEKLTNLGAIFSIQKNYIHSYPYDWRSKKPIIIRSTPQWFINIDQI 494
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
K L L++V F P+ K L I +R WCISRQR WGVPIPV Y+ DT I+N+
Sbjct: 495 KERTLKTLQDVKFYPDKGFKRLETFIQRRQEWCISRQRSWGVPIPVIYEKDTGKEILNDE 554
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNS-NVTKSNDILDIWFDSGISWSHVL 763
I I+ G D W+ + + L + +S + ND +D+WFDSG SW H++
Sbjct: 555 VIGAITKYIEGAGVDSWFDKNCDMSNFLPESMKADSEKYVRGNDTMDVWFDSGTSW-HLI 613
Query: 764 KDKPAH-------------VYMEGMDQINGWFMSSLLTSVAL-----KHTAPFRNVFLHG 805
+D H VY+EG DQ GWF SSLLT +A+ K +P+R + HG
Sbjct: 614 EDFLKHNGQDINSRNYLADVYLEGSDQHRGWFQSSLLTKMAICKDKEKTISPYRKIITHG 673
Query: 806 FVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDV 865
F +DEKG KMSKS+GN + D+ G K +K +PA GVD
Sbjct: 674 FTLDEKGNKMSKSLGNTLKPQDVINGVK---------------------SKNIPALGVDG 712
Query: 866 LRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYV 922
+R WV A + V IG IL ++++KIR +++++LG L S + +
Sbjct: 713 IRLWV-AQSDYFTDVAIGPTILKHVAENLKKIRFTIKFILGNLEGFSMDKSVPYQDLQLL 771
Query: 923 DVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEA 982
D Y L +L Q Y EF +++ R L + + ELS+ YF LVKDR+Y D+ + +
Sbjct: 772 DQYALSKLYSLQQICKESYSEFNFSKVVRNLNHHMNVELSSVYFDLVKDRVYADAPDSAS 831
Query: 983 RLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
R S L I + ++PI P +A+E ++H P
Sbjct: 832 RRSVQTVLVAILQSYISILSPITPIIAQEAWNHAP 866
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/419 (39%), Positives = 230/419 (54%), Gaps = 44/419 (10%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG HIGHA+NK+LKDI R NL+ GKRV Y PGWDCHGLPIELKA+ +
Sbjct: 83 FILHDGPPYANGELHIGHALNKVLKDIINRFNLIDGKRVFYKPGWDCHGLPIELKALEAL 142
Query: 80 ----------------------------------KDKLLSPLDIRKKAKNFALETINTQK 105
K L+P DIR A++FAL T Q
Sbjct: 143 RKEQNTRVKILKSQLKKTTNEEERDNIEHEIKQVKRSKLTPSDIRTLARSFALATSEAQS 202
Query: 106 AEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAE 165
F+ GV+ D++ N Y T D YV NQL F + I R KPVYWS + TALAE
Sbjct: 203 KSFQELGVMGDFK-NPYKTLDPSYVINQLYIFKQMMDNGLIRRQEKPVYWSCENATALAE 261
Query: 166 SELEYKPDHVSKSIYLKIKLNQVPAHLLEG-ATDLHALIWTTTPWSLPANQFIAFNPALE 224
ELEY H S +IYLK ++ L ++ LIWTTTPW++ AN+ ++ N L+
Sbjct: 262 GELEYNDSHNSTAIYLKFPVDTTDLKELSSLGNKVNLLIWTTTPWTIVANKAVSVNSKLD 321
Query: 225 YSVASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLP 284
Y++ + +IVA L + + + + G L TYI+ + + +L
Sbjct: 322 YTILKHQSEYLIVALDLASQVMSSKEGIEDTKIHLSGAQLLKTTYINSLTGGVKQ-PILD 380
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD---AGPGLEGLNI 341
V++ GTGLVH AP HG DD+ + L I + + + G+Y+PD + L GL++
Sbjct: 381 GDHVTNVAGTGLVHTAPGHGNDDYWVCLKNDIAPYSPVDSFGRYTPDVPESCKDLIGLHV 440
Query: 342 LGDGKDQVLH-LVEPDVLWT--ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L +G +V+ L +++ +NY HSYPYDWR+KKP+I++++ QWFI+ ++IK L
Sbjct: 441 LKEGAPKVVEKLTNLGAIFSIQKNYIHSYPYDWRSKKPIIIRSTPQWFINIDQIKERTL 499
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 8/151 (5%)
Query: 1113 GKYSPD---AGPGLEGLNILGEGKDQVLH-LVEPDVLWT--ENYQHSYPYDWRTKKPVIL 1166
G+Y+PD + L GL++L EG +V+ L +++ +NY HSYPYDWR+KKP+I+
Sbjct: 422 GRYTPDVPESCKDLIGLHVLKEGAPKVVEKLTNLGAIFSIQKNYIHSYPYDWRSKKPIII 481
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+++ QWFI+ ++IK L L+ V F P+ K L I +R WCISRQR WGVPIPV
Sbjct: 482 RSTPQWFINIDQIKERTLKTLQDVKFYPDKGFKRLETFIQRRQEWCISRQRSWGVPIPVI 541
Query: 1227 YDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
Y+ DT I+N+ I I+ G D W+
Sbjct: 542 YEKDTGKEILNDEVIGAITKYIEGAGVDSWF 572
>gi|423367940|ref|ZP_17345372.1| isoleucyl-tRNA synthetase [Bacillus cereus VD142]
gi|401082801|gb|EJP91066.1| isoleucyl-tRNA synthetase [Bacillus cereus VD142]
Length = 921
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 226/641 (35%), Positives = 330/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I +
Sbjct: 424 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISNVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENTVAAAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 693 AYEAYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHHDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + + ++ G+ A
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEVVEVDGAEA 793
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENTEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L +E +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I + L EHG + W+ + LL
Sbjct: 475 DE-TISNVADLFREHGSNVWFEREAKDLL 502
>gi|381183893|ref|ZP_09892585.1| isoleucyl-tRNA synthetase [Listeriaceae bacterium TTU M1-001]
gi|380316214|gb|EIA19641.1| isoleucyl-tRNA synthetase [Listeriaceae bacterium TTU M1-001]
Length = 851
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 222/623 (35%), Positives = 329/623 (52%), Gaps = 56/623 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + +LE T + +IWTTTPW++PAN I N
Sbjct: 123 SALAEAEIEYQ-DKTSASIYVAFDVTDGKG-VLENGTKI--VIWTTTPWTIPANMAITVN 178
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y++ G +VA LV++LK + D +V+ G+ L + HP RD
Sbjct: 179 PELDYAIVKTNGQQYVVANALVDSLKEILEWADAEVIKTVRGKELDRVVAKHPFY--DRD 236
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ ++ GTG VH AP HG+DDF++ ++ VL + ++G ++ D PG EGL
Sbjct: 237 SLVINGEHATADAGTGAVHTAPGHGEDDFIVGQKYELEVLAPLDSRGVFT-DEAPGFEGL 295
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 296 FYDDANKLVTEKLKEVGALLKMDFITHSYPHDWRTKKPVIFRATPQWFASINKFRGELLE 355
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++ V + P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 356 AVQNVTWTPSWGETRLYNMVRDRGDWVISRQRAWGVPLPIFYGENGEPIITDE-TIAHIS 414
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK---- 764
L EHG + W+ + LL + S N TK DI+D+WFDSG S VL
Sbjct: 415 DLFREHGSNVWFEREAKDLLPEGFTHPSSPNGEFTKETDIMDVWFDSGSSHQAVLASRKE 474
Query: 765 -DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN I
Sbjct: 475 LSRPADLYMEGSDQYRGWFNSSLTTAVAMTGEAPYRNVLSHGFALDGEGRKMSKSLGNTI 534
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
LP G VI+ G D++R WV++ V I
Sbjct: 535 -----------LP------GKVIN------------QLGADIVRLWVSS-VDYQADVRIS 564
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR+++R+LLG + + + T +++ R VD +ML +L E +
Sbjct: 565 DDILKQVSEVYRKIRNTMRFLLGNVSDFNPETDTVAFGELREVDQFMLVKLNELVQNVRN 624
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F+++ + NF LS FY KD +Y ++ N + R + + L +
Sbjct: 625 SYEKFEFSTIYHQINNFCTVMLSQFYMDFAKDVVYIEAANSKDRRAMQTVFYAAATSLSK 684
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGT 1022
+API+PH A+EV+ +L + T
Sbjct: 685 LLAPILPHTADEVWLNLNGDETT 707
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 206/363 (56%), Gaps = 14/363 (3%)
Query: 40 VNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSKD---KLLSPLDIRKKAKNF 96
+NK +KDI +R + G R YVPGWD HGLPIE +A+T K K ++ + RK + +
Sbjct: 1 MNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIE-QALTKKGVKRKEMTVAEFRKLCEEY 59
Query: 97 ALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWS 156
A + ++ Q+ F+ GV D++ N Y T EY Q+ F + K+ YIY+ KPVYWS
Sbjct: 60 AYKQVDIQRTGFKRLGVSGDFD-NPYITLKPEYEAEQIKVFGEMAKKGYIYKGKKPVYWS 118
Query: 157 PSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQF 216
PSS +ALAE+E+EY+ D S SIY+ + +LE T + +IWTTTPW++PAN
Sbjct: 119 PSSESALAEAEIEYQ-DKTSASIYVAFDVTDGKG-VLENGTKI--VIWTTTPWTIPANMA 174
Query: 217 IAFNPALEYSVASVKGANVIVAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINK 275
I NP L+Y++ G +VA LV+SLK + D EV+ G+ L + HP
Sbjct: 175 ITVNPELDYAIVKTNGQQYVVANALVDSLKEILEWADAEVIKTVRGKELDRVVAKHPFY- 233
Query: 276 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 335
RD ++ ++ GTG VH AP HG+DDF++ ++ VL + ++G ++ D PG
Sbjct: 234 -DRDSLVINGEHATADAGTGAVHTAPGHGEDDFIVGQKYELEVLAPLDSRGVFT-DEAPG 291
Query: 336 LEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKP 394
EGL K L E L ++ HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 292 FEGLFYDDANKLVTEKLKEVGALLKMDFITHSYPHDWRTKKPVIFRATPQWFASINKFRG 351
Query: 395 EAL 397
E L
Sbjct: 352 ELL 354
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 14/154 (9%)
Query: 1118 DAGPGLEGL------NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQ 1171
D PG EGL ++ E +V L++ D + HSYP+DWRTKKPVI +A+ Q
Sbjct: 287 DEAPGFEGLFYDDANKLVTEKLKEVGALLKMDFI-----THSYPHDWRTKKPVIFRATPQ 341
Query: 1172 WFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DG 1229
WF + + E L ++ V + P + L + + R W ISRQR WGVP+P+FY +G
Sbjct: 342 WFASINKFRGELLEAVQNVTWTPSWGETRLYNMVRDRGDWVISRQRAWGVPLPIFYGENG 401
Query: 1230 DTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II +E I H L EHG + W+ + LL
Sbjct: 402 EPIITDE-TIAHISDLFREHGSNVWFEREAKDLL 434
>gi|228902401|ref|ZP_04066555.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|434376999|ref|YP_006611643.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-789]
gi|228857145|gb|EEN01651.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|401875556|gb|AFQ27723.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-789]
Length = 921
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP R+
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRN 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 280 bits (715), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP R+ ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRNSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|254827094|ref|ZP_05231781.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
gi|258599477|gb|EEW12802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
Length = 921
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ NL K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPNLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTERLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YM+ +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMMIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 225/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+L K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PNLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTERLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTERLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|75763516|ref|ZP_00743228.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74488998|gb|EAO52502.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 803
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 193 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP R+
Sbjct: 249 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRN 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 307 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 365
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 366 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 425
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 426 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 485 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 545 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 605 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 635 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 695 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 754
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 755 LVTPILPHTADEVWPYIPG 773
Score = 279 bits (714), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 38 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 97
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 98 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 155
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 156 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 214
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 215 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 271
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP R+ ++ V++ GTG VH AP
Sbjct: 272 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRNSLVMLGDHVTTDAGTGCVHTAPG 329
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 330 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 388
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 389 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 424
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 357 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 416
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 417 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 476
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 477 DE-TINHVADLFREHGSNVWFEREAKDLL 504
>gi|423635332|ref|ZP_17610985.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD156]
gi|401278083|gb|EJR84019.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD156]
Length = 921
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+W DSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWLDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ + LL
Sbjct: 475 DE-TINHVADLFREHGSNVWFEREAKDLL 502
>gi|365157070|ref|ZP_09353351.1| isoleucyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
gi|363625804|gb|EHL76815.1| isoleucyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
Length = 923
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 329/619 (53%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + L +D +IWTTTPW++PAN I+ +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKDGKGVL---DSDTSIVIWTTTPWTIPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P + Y V V G +VA+ L+E++ + + V G L+ + HP+ RD
Sbjct: 247 PDINYVVVRVNGHKYVVAEALLEDVSSALEWNEPSVEKTLKGTELEYVVAKHPLYG--RD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL+++ ++G + DA PG EGL
Sbjct: 305 SLVMLGEHVTTDSGTGCVHTAPGHGEDDFLVGKKYNLDVLSVVDDKGCMTEDA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 364 FYDDANKAITKKLEEAGALLKLAFITHSYPHDWRTKKPVIFRATAQWFASIDAFREQLLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E N+VPE + L + I R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 424 AVKETNWVPEWGETRLYNMIRDRGDWCISRQRAWGVPIPVFYAENGEAIITDET-IQHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 483 ELFRQYGSNVWFEREAKDLLPEGFTHPGSPNGQFTKETDIMDVWFDSGSSHQAVLQEREE 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 543 LNRPADLYLEGSDQYRGWFNSSLTTAVAVTGKAPYKAVLSHGFALDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + YG D+LR WVA+ V +
Sbjct: 603 -----------VPA------------------KVMNQYGADILRLWVAS-VDFQADVRVS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG L + S+S R VD Y+L +L ++
Sbjct: 633 DAILKQVSEVYRKIRNTFRFLLGNLADFDPKKDSLSYDNLREVDQYILVKLNHLIKSVHD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++Y+ + NF +LS+FY KD LY + +N R + L+ L++
Sbjct: 693 HYEHYEYSAIYHEINNFCTFDLSSFYLDFAKDILYIEPMNFYERRAIQTVLYECLVSLVK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
+API+ H A+EV+ H+P
Sbjct: 753 LIAPILAHTADEVWEHIPG 771
Score = 286 bits (733), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 229/396 (57%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y ++ G+P F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGWD
Sbjct: 36 IYQKVQKRTEGRPLFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K +S + RK + +A E IN Q+ +F+ GV DWE N Y
Sbjct: 96 THGLPIE-QALTNKGVNRKEMSVAEFRKLCEQYAYEQINNQREQFKRLGVRGDWE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L +D +IWTTTPW++PAN I+ +P + Y V V G +VA+ L+E
Sbjct: 213 PVKDGKGVL---DSDTSIVIWTTTPWTIPANLGISVHPDINYVVVRVNGHKYVVAEALLE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ + + V G L+ + HP+ RD ++ V++ GTG VH AP
Sbjct: 270 DVSSALEWNEPSVEKTLKGTELEYVVAKHPLYG--RDSLVMLGEHVTTDSGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL+++ ++G + DA PG EGL K L E L
Sbjct: 328 HGEDDFLVGKKYNLDVLSVVDDKGCMTEDA-PGFEGLFYDDANKAITKKLEEAGALLKLA 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 387 FITHSYPHDWRTKKPVIFRATAQWFASIDAFREQLL 422
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
L+++ ++G + DA PG EGL K L E L + HSYP+DWRTKKPV
Sbjct: 344 LSVVDDKGCMTEDA-PGFEGLFYDDANKAITKKLEEAGALLKLAFITHSYPHDWRTKKPV 402
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF + + + L ++ N+VPE + L + I R WCISRQR WGVPIP
Sbjct: 403 IFRATAQWFASIDAFREQLLEAVKETNWVPEWGETRLYNMIRDRGDWCISRQRAWGVPIP 462
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY +G+ II +E I+H L ++G + W+ + LL
Sbjct: 463 VFYAENGEAIITDE-TIQHVSELFRQYGSNVWFEREAKDLL 502
>gi|228992630|ref|ZP_04152556.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228766962|gb|EEM15599.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 962
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 325/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + +LEG D +IWTTTPW+LPAN I+ +
Sbjct: 232 SALAEAEIEYN-DKKSASIYVAFPVKD-GKDVLEG--DEKFIIWTTTPWTLPANLGISVH 287
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L + + T + + +VV G L+ HP +RD
Sbjct: 288 PELEYSIVKVNDEKYIIASELFDTVSKTLEWENAEVVKTVKGSELEYTVAKHPFY--ERD 345
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EGL
Sbjct: 346 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFLVGKQYGLEVLCPVDDKGVLTSEA-PGFEGL 404
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 405 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 464
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 465 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 523
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L E+G + W+ + LL + S N K DI+D+WFDSG S VL++
Sbjct: 524 DLFRENGSNVWFEREAKGLLPEGFTHPSSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 583
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 584 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 643
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 644 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 673
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + S +++ R VD YML +L + +
Sbjct: 674 DDILKQVAEVYRKIRNTFRFLLGNLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKE 733
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY ++ N R + L+++ L +
Sbjct: 734 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEAENHHDRRAIQTVLYDVLVALTK 793
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 794 LVTPILPHTADEVWPYVPG 812
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 228/396 (57%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 77 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 136
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E +N Q+ +F+ GV ADW+ Y
Sbjct: 137 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWDRP-YI 194
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F + K+ YIY+ KPVYWSP+S +ALAE+E+EY D S SIY+
Sbjct: 195 TLEPAYEAQQIKVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEIEYN-DKKSASIYVAF 253
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ +LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L +
Sbjct: 254 PVKD-GKDVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFD 310
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP +RD ++ V++ GTG VH AP
Sbjct: 311 TVSKTLEWENAEVVKTVKGSELEYTVAKHPFY--ERDSLVMLGEHVTTDAGTGCVHTAPG 368
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EGL K L E L
Sbjct: 369 HGEDDFLVGKQYGLEVLCPVDDKGVLTSEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 427
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 428 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 463
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 388 VDDKGVLTSEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 446
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L +E +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 447 ATAQWFASIEAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 506
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD II +E I H L E+G + W+ + LL
Sbjct: 507 AENGDPIITDE-TINHVADLFRENGSNVWFEREAKGLL 543
>gi|152976256|ref|YP_001375773.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|189082319|sp|A7GRM0.1|SYI_BACCN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|152025008|gb|ABS22778.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 921
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 325/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ ++ +LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYK-DKKSASIYVAFEVKD-GKDVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L + + T + + +VV G L+ HP RD
Sbjct: 247 PKLEYSIVKVNDEKYIIASDLFDTVAKTLEWENPEVVRTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDDKGVLTSEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRSELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + + R WCISRQR WGVPIPVFY + D II +E I H
Sbjct: 424 AVKETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENNDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L EHG + W+ + LL + S N K DI+D+WFDSG S VL++
Sbjct: 483 NLFREHGSNVWFEREAKDLLPEGFTHPSSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + + +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLADFNPAQDAVAKAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY ++ N R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEAANHHDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 283 bits (725), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 229/396 (57%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K + + RK +A E +N Q+ +F+ GV ADW+H Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMPVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWDHP-YI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F + K+ YIY+ KPVYWSP+S +ALAE+E+EYK D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEIEYK-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
++ +LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L +
Sbjct: 213 EVKD-GKDVLEG--DEKFIIWTTTPWTLPANLGISVHPKLEYSIVKVNDEKYIIASDLFD 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENPEVVRTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFIVGQKYGLEVLCPVDDKGVLTSEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRSELL 422
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L + HSYP+DWRTKKP+I +
Sbjct: 347 VDDKGVLTSEA-PGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + E L ++ +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 406 ATAQWFASIEAFRSELLQAVKETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ D II +E I H L EHG + W+ + LL
Sbjct: 466 AENNDPIITDE-TINHVANLFREHGSNVWFEREAKDLL 502
>gi|308173505|ref|YP_003920210.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|384159475|ref|YP_005541548.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
gi|384164089|ref|YP_005545468.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
gi|384168523|ref|YP_005549901.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens XH7]
gi|307606369|emb|CBI42740.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|328553563|gb|AEB24055.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
gi|328911644|gb|AEB63240.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
gi|341827802|gb|AEK89053.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens XH7]
Length = 921
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 222/618 (35%), Positives = 334/618 (54%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ K+ L G + +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFKVKDGKGVLENGES---FIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWT--FQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P LEY+V V +VA L+E++ F+ + +VV + G+ L+ IT HP+ R
Sbjct: 248 PDLEYNVIKVGDKRYVVAAELIESVAQACGFE-NPEVVASYKGRELEYITAEHPLYG--R 304
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ V++ GTG VH AP HG+DDF++ + VL + +G + D PG EG
Sbjct: 305 DSLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEG 363
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 364 MFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ +I +E I+H
Sbjct: 424 DAIQQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPVITDET-IEHV 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD-- 765
L +HG + W+ + LL + N TK DI+D+WFDSG S VL++
Sbjct: 483 SELFKKHGSNVWFEREAKDLLPEGFTHPGSPNGIFTKEQDIMDVWFDSGSSHQAVLEERD 542
Query: 766 ---KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D G KMSKS+GN
Sbjct: 543 DLVRPADLYLEGSDQYRGWFNSSLSTAVAVTGQAPYKGVLSHGFTLDANGRKMSKSLGNT 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I D T+ AK+L G ++LR WV++ + P+
Sbjct: 603 I---DPTKIAKQL--------------------------GAEILRLWVSS-VNYQADHPV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
++IL + +K+R++ R+L G L + S +++ R VD YML +L + + +
Sbjct: 633 SEDILKQVAEVYRKVRNTFRFLHGNLFDFDPSVNAVAVKDLREVDQYMLIKLNKLIDKVK 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y E+++A + NF ELS+FY KD +Y + + R S + L+
Sbjct: 693 KAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALV 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ API+PH A+E++SHL
Sbjct: 753 KLTAPILPHTADEMWSHL 770
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 227/398 (57%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S D RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVADFRKLCEEYAWQQIERQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L G + +IWTTTPW++PAN I+ +P LEY+V V +VA L+
Sbjct: 213 FKVKDGKGVLENGES---FIIWTTTPWTIPANLGISVHPDLEYNVIKVGDKRYVVAAELI 269
Query: 243 ESLKWT--FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
ES+ F+ + EVV + G+ L+ IT HP+ RD ++ V++ GTG VH A
Sbjct: 270 ESVAQACGFE-NPEVVASYKGRELEYITAEHPLYG--RDSLVMLGDHVTTDAGTGCVHTA 326
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDF++ + VL + +G + D PG EG+ K L E L
Sbjct: 327 PGHGEDDFIVGQKYGLEVLCPVDEKGNMT-DEAPGFEGMFYDKANKPITEKLEENGALLK 385
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 386 LEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
D PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF
Sbjct: 356 DEAPGFEGMFYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIFRATAQWFASI 415
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + + L ++ +VPE ++ L + + R WCISRQRVWGVPIPVFY +G+ +I
Sbjct: 416 KDFRSDLLDAIQQTKWVPEWGEQRLYNMVRDRGDWCISRQRVWGVPIPVFYAENGEPVIT 475
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L +HG + W+ + LL
Sbjct: 476 DET-IEHVSELFKKHGSNVWFEREAKDLL 503
>gi|194014535|ref|ZP_03053152.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
gi|194013561|gb|EDW23126.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
Length = 921
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 224/617 (36%), Positives = 329/617 (53%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ K+ L G +IWTTTPW+LPAN I +
Sbjct: 192 SALAEAEIEYK-DKRSPSIYVSFKVKDGKGVLENGE---QFIIWTTTPWTLPANLGICVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV V +VA LVE + T + +VV G+ L ++ HPI RD
Sbjct: 248 PNLEYSVLQVGAERYVVASELVEQVAKTLGFEEYEVVKTLKGKELDNVVAEHPIYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++++ + VL + +G + +A PG EGL
Sbjct: 306 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVSMKYGLDVLCPVDEKGVMTEEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L L ++ HSYP+DWRTKKP I +A+ QWF + + L
Sbjct: 365 FYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTIYRATAQWFASIKDFREALLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + + R WCISRQRVWGVPIPVFY +G+ II +E I+H
Sbjct: 425 NIKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIITDE-TIQHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL++
Sbjct: 484 QLFREHGSNIWFEKEAKELLPEGFTHPGSPNGEFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D++G KMSKS+GN I
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLGNTI 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
D T+ AK+L G ++LR WV++ + P+
Sbjct: 604 ---DPTKVAKQL--------------------------GAEILRLWVSS-VNYQADHPVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+L G L + + ++ R VD Y+L +L + + +
Sbjct: 634 DDILKQVAEVYRKIRNTFRFLHGNLFDFEPAVHAVPVEELREVDQYILIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDDYEFAVVYHAIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLMALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LTAPILPHTADELWSHL 770
Score = 286 bits (732), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 226/398 (56%), Gaps = 14/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y E G+P FILHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYQMVLERTKGRPTFILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K +S + RK + +A + I Q+ +F+ GV ADW+ N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWD-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 VTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYK-DKRSPSIYVS 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L G +IWTTTPW+LPAN I +P LEYSV V +VA LV
Sbjct: 213 FKVKDGKGVLENGE---QFIIWTTTPWTLPANLGICVHPNLEYSVLQVGAERYVVASELV 269
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E + T + EVV G+ L ++ HPI RD ++ V++ GTG VH AP
Sbjct: 270 EQVAKTLGFEEYEVVKTLKGKELDNVVAEHPIYG--RDSLVMLGDHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++++ + VL + +G + +A PG EGL K L L
Sbjct: 328 GHGEDDFIVSMKYGLDVLCPVDEKGVMTEEA-PGFEGLFYEDANKAITEQLEAKGALKKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
++ HSYP+DWRTKKP I +A+ QWF + + EAL+
Sbjct: 387 DFITHSYPHDWRTKKPTIYRATAQWFASIKDFR-EALL 423
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L L ++ HSYP+DWRTKKP I +A+ QWF
Sbjct: 356 EEAPGFEGLFYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTIYRATAQWFASI 415
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + L ++ +VP + L + + R WCISRQRVWGVPIPVFY +G+ II
Sbjct: 416 KDFREALLDNIKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIIT 475
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L EHG + W+ ++LL
Sbjct: 476 DE-TIQHVSQLFREHGSNIWFEKEAKELL 503
>gi|422416550|ref|ZP_16493507.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
gi|313623007|gb|EFR93300.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
Length = 921
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 227/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T S+S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNSVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 224/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+P +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|395242178|ref|ZP_10419177.1| Isoleucyl-tRNA synthetase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480539|emb|CCI85417.1| Isoleucyl-tRNA synthetase [Lactobacillus pasteurii CRBIP 24.76]
Length = 925
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 218/619 (35%), Positives = 329/619 (53%), Gaps = 60/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + +IY+ ++ L + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANTIYVAFQVKDGKGILDD---DTYFIIWTTTPWTIPANEAICVN 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P Y V V +VA L+ E + W + +VV G L+ +T HP+
Sbjct: 247 PKFVYDVVKVGDKKYVVADGLLTTVAEQIGWE---NYEVVKSLKGAELEYMTAKHPLF-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ L+ V+ GTGLVH AP G+DD+ + +P+ + + NQGK++ D P L
Sbjct: 302 DRESLLIEGLHVTLDGGTGLVHTAPGFGEDDYNVGKKYDLPIFSPVDNQGKFT-DEIPEL 360
Query: 594 EGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ + V L E L + HSYP+DWRTKKPVI +A+ QWF + E
Sbjct: 361 AGMFYQDVDELMVKKLEEAKALLKLKKIVHSYPHDWRTKKPVIFRATTQWFASISSFRQE 420
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L +E+ NFVP K L + I R W ISRQR WGVP+P+FY D T I+N I+H
Sbjct: 421 ILDEIEKTNFVPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIINAETIEH 480
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
+ ++ G + W++ + ++LL + N K DILD+WFDSG SW+ V++ +
Sbjct: 481 IAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFKKETDILDVWFDSGSSWAAVMRKR 540
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSVA AP++ + GFV+D+KG KMSKS+GN
Sbjct: 541 DGLQYPASLYLEGSDQYRGWFNSSLITSVANTGKAPYKQILSQGFVLDDKGHKMSKSLGN 600
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VIS D+ KK+ G +++R WV A A V
Sbjct: 601 VISPTDVI---KKM--------------------------GAEIIRLWV-AQADTTSDVA 630
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
+ +ILN + + +KIR++ RY+L + +T ++ R VD YM +L +
Sbjct: 631 VSYDILNQAAESYRKIRNTFRYMLANTSDFEPATNRVAYEDLRSVDQYMEVKLNDLVADC 690
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y +F + + + NF+ N+LSAFY KD LY ++ + +AR S +++ L
Sbjct: 691 LAAYDKFDFNTVFKKVFNFISNDLSAFYLDFAKDVLYIEAADSKARRSMQTVIYDAAVKL 750
Query: 998 LRTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++++L
Sbjct: 751 DKILTPILPHTMEEIWAYL 769
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 219/400 (54%), Gaps = 18/400 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y + + G F LHDGPP+ANG H+GH++NK+ KDI +R ++G YVPG
Sbjct: 34 NDIYQRRLKLNQGHERFDLHDGPPFANGNIHMGHSLNKVSKDIIVRYKGMRGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K + R+ +A E I QKA+F GV+ADW+H Y
Sbjct: 94 WDTHGLPIEQQLAKQGVDRKTMDRAKYRELCHQYAEEQIAKQKADFMRLGVMADWDH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ ++ F +YK+ YIY+ KPVYWS SS + LAE+E+EYK D + +IY+
Sbjct: 153 ITLQPEFEAEEIRVFGEMYKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANTIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
++ L + D + +IWTTTPW++PAN+ I NP Y V V +VA L+
Sbjct: 212 FQVKDGKGILDD---DTYFIIWTTTPWTIPANEAICVNPKFVYDVVKVGDKKYVVADGLL 268
Query: 243 ----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E + W + EVV G L+ +T HP+ R+ L+ V+ GTGLVH
Sbjct: 269 TTVAEQIGW---ENYEVVKSLKGAELEYMTAKHPLF--DRESLLIEGLHVTLDGGTGLVH 323
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP G+DD+ + +P+ + + NQGK++ D P L G+ + V L E L
Sbjct: 324 TAPGFGEDDYNVGKKYDLPIFSPVDNQGKFT-DEIPELAGMFYQDVDELMVKKLEEAKAL 382
Query: 359 WT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + E L
Sbjct: 383 LKLKKIVHSYPHDWRTKKPVIFRATTQWFASISSFRQEIL 422
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ NQGK++ D P L G+ + V L E L + HSYP+DWRTKKPVI +
Sbjct: 347 VDNQGKFT-DEIPELAGMFYQDVDELMVKKLEEAKALLKLKKIVHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + E L +E NFVP K L + I R W ISRQR WGVP+P+FY
Sbjct: 406 ATTQWFASISSFRQEILDEIEKTNFVPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+N I+H + ++ G + W++ ++LL
Sbjct: 466 AEDGTPIINAETIEHIAKIFEKEGSNAWYTHTAKELL 502
>gi|407706354|ref|YP_006829939.1| cytochrome c oxidase subunit III [Bacillus thuringiensis MC28]
gi|407384039|gb|AFU14540.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis MC28]
Length = 921
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +VV G L+ HP +RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFRKHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYVPG 771
Score = 283 bits (725), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 231/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP +RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--ERDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L +HG + W+ + LL
Sbjct: 475 DE-TINHVADLFRKHGSNVWFEREAKDLL 502
>gi|337748288|ref|YP_004642450.1| protein IleS [Paenibacillus mucilaginosus KNP414]
gi|336299477|gb|AEI42580.1| IleS [Paenibacillus mucilaginosus KNP414]
Length = 922
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 329/622 (52%), Gaps = 61/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + L + D +IWTTTPW+LPAN I+ +
Sbjct: 192 SALAEAEIEYK-DKTSSSIYVAFDVADGKGKLPQ---DAAIVIWTTTPWTLPANLGISLH 247
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y G ++A+ L+E + WT D+ V+ G L+ + HP
Sbjct: 248 PDFDYVTVETGGRKFVLAQGLLEAAAKEIGWT---DVKVLATHKGSELELVLCKHPFY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V+ GTG VH AP HG+DDF++ + VL + +QG + +A PG
Sbjct: 303 DRTSLVMTGEHVTLEAGTGCVHTAPGHGEDDFVIGQRYNLGVLCPVDDQGHMTSEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K + L E +L QH YP+DWRTKKPVI +A++QWF ++ + E
Sbjct: 362 EGLFYDKASKAVIEKLQESAHLLHQATIQHQYPHDWRTKKPVIFRATEQWFASIDKFRSE 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++++N+ PE + L + IA+R WCISRQR WGVPIP+FY + +VNEA I+
Sbjct: 422 MLDEIKKINWTPEWGEIRLHNMIAERGDWCISRQRAWGVPIPIFYCRSCNEPLVNEATIE 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKD 765
H + +E G + W+ ++LL + + K DI+D+WFDSG S VL+
Sbjct: 482 HVAKIFEEEGSNAWFVREEKELLPAGTACAKCGHDHFRKETDIMDVWFDSGSSHMAVLEA 541
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GW+ SSL+T VA+K +P++ + HGF +D +G KMSKS+G
Sbjct: 542 REELQWPADLYLEGSDQYRGWYNSSLITGVAVKGQSPYKGILSHGFTLDGEGRKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N + D Q KL G D+LR WV++ V
Sbjct: 602 NTV---DPNQVCNKL--------------------------GADILRLWVSS-TDYQSDV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
I NILN + + +KIR++LR+LLG L + S + +S +D Y + RL
Sbjct: 632 RISDNILNQTSEGYRKIRNTLRFLLGNLSDFSPAADRVSVREMSELDRYAMLRLNRLIER 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +++ + + +F E+SAFY ++KDRLY AR + L+ V
Sbjct: 692 VVAAYENYEFHVVYQAVHHFCAVEMSAFYLDILKDRLYASLPQDPARRAAQTVLYEALTV 751
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
+ + +API+PH ++EV+ ++P
Sbjct: 752 ITKLIAPILPHTSDEVWKYIPG 773
Score = 290 bits (743), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 232/399 (58%), Gaps = 15/399 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y +E+ GKP+FILHDGPPYANG HIGHA+NKILKDI +R +QG YVPG
Sbjct: 34 TDIYLQVQESRKGKPKFILHDGPPYANGDIHIGHALNKILKDIIVRFKTMQGYDAPYVPG 93
Query: 65 WDCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WD HGLPIE +AI + K+ +S + R K +ALE + QK +F+ G+ DW +N
Sbjct: 94 WDTHGLPIE-QAIANGGKVDRKKMSVSEFRDYCKAYALEWVEKQKTQFKRLGIRGDW-NN 151
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T +Y Q+ F + + YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY
Sbjct: 152 PYITLQPKYEAQQIRLFGGMVNKGYIYKGLKPVYWSPSSESALAEAEIEYK-DKTSSSIY 210
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ + L + D +IWTTTPW+LPAN I+ +P +Y G ++A+
Sbjct: 211 VAFDVADGKGKLPQ---DAAIVIWTTTPWTLPANLGISLHPDFDYVTVETGGRKFVLAQG 267
Query: 241 LVE-SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+E + K TD++V+ G L+ + HP R ++ V+ GTG VH
Sbjct: 268 LLEAAAKEIGWTDVKVLATHKGSELELVLCKHPFY--DRTSLVMTGEHVTLEAGTGCVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE-PDVL 358
AP HG+DDF++ + VL + +QG + +A PG EGL K + L E +L
Sbjct: 326 APGHGEDDFVIGQRYNLGVLCPVDDQGHMTSEA-PGFEGLFYDKASKAVIEKLQESAHLL 384
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QH YP+DWRTKKPVI +A++QWF ++ + E L
Sbjct: 385 HQATIQHQYPHDWRTKKPVIFRATEQWFASIDKFRSEML 423
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +QG + +A PG EGL K + L E +L QH YP+DWRTKKPVI +
Sbjct: 348 VDDQGHMTSEA-PGFEGLFYDKASKAVIEKLQESAHLLHQATIQHQYPHDWRTKKPVIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF ++ + E L ++ +N+ PE + L + IA+R WCISRQR WGVPIP+FY
Sbjct: 407 ATEQWFASIDKFRSEMLDEIKKINWTPEWGEIRLHNMIAERGDWCISRQRAWGVPIPIFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ +VNEA I+H + +E G + W+ ++LL
Sbjct: 467 CRSCNEPLVNEATIEHVAKIFEEEGSNAWFVREEKELL 504
>gi|389573336|ref|ZP_10163411.1| isoleucyl-tRNA synthetase [Bacillus sp. M 2-6]
gi|388427033|gb|EIL84843.1| isoleucyl-tRNA synthetase [Bacillus sp. M 2-6]
Length = 921
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 328/617 (53%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ K+ L G +IWTTTPW+LPAN I +
Sbjct: 192 SALAEAEIEYK-DKRSPSIYVSFKVKDGKGVLENGE---QFIIWTTTPWTLPANLGICVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV V ++A LVE + T + +VV G+ L + HPI RD
Sbjct: 248 PNLEYSVLQVGAERYVIASELVEQVAKTLGFEEYEVVKTLKGKELDKVVAAHPIY--DRD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++++ + VL + +G + +A PG EGL
Sbjct: 306 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVSMKYGLDVLCPVDEKGVMTEEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L L ++ HSYP+DWRTKKP I +A+ QWF + + L
Sbjct: 365 FYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTIYRATAQWFASIKDFREALLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + + R WCISRQRVWGVPIPVFY +G+ II +E I+H
Sbjct: 425 NIKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIITDE-TIQHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL++
Sbjct: 484 QLFREHGSNIWFEKEAKELLPEGFTHPGSPNGEFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D++G KMSKS+GN I
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLGNTI 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
D T+ AK+L G ++LR WV++ + P+
Sbjct: 604 ---DPTKVAKQL--------------------------GAEILRLWVSS-VNYQADHPVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+L G L + + ++ R VD Y+L +L + + +
Sbjct: 634 DDILKQVAEVYRKIRNTFRFLHGNLFDFDPAVNAVPVEELREVDQYILIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDDYEFAVVYHAIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLMALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LTAPILPHTADELWSHL 770
Score = 285 bits (730), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/398 (42%), Positives = 225/398 (56%), Gaps = 14/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y E G+P FILHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYQMVLERTKGRPTFILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K +S + RK + +A + I Q+ +F+ GV ADW+ N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWD-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 VTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYK-DKRSPSIYVS 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L G +IWTTTPW+LPAN I +P LEYSV V ++A LV
Sbjct: 213 FKVKDGKGVLENGE---QFIIWTTTPWTLPANLGICVHPNLEYSVLQVGAERYVIASELV 269
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E + T + EVV G+ L + HPI RD ++ V++ GTG VH AP
Sbjct: 270 EQVAKTLGFEEYEVVKTLKGKELDKVVAAHPIY--DRDSLVMLGDHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++++ + VL + +G + +A PG EGL K L L
Sbjct: 328 GHGEDDFIVSMKYGLDVLCPVDEKGVMTEEA-PGFEGLFYEDANKAITEQLEAKGALKKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
++ HSYP+DWRTKKP I +A+ QWF + + EAL+
Sbjct: 387 DFITHSYPHDWRTKKPTIYRATAQWFASIKDFR-EALL 423
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L L ++ HSYP+DWRTKKP I +A+ QWF
Sbjct: 356 EEAPGFEGLFYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTIYRATAQWFASI 415
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + L ++ +VP + L + + R WCISRQRVWGVPIPVFY +G+ II
Sbjct: 416 KDFREALLDNIKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIIT 475
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L EHG + W+ ++LL
Sbjct: 476 DE-TIQHVSQLFREHGSNIWFEKEAKELL 503
>gi|386725928|ref|YP_006192254.1| protein IleS [Paenibacillus mucilaginosus K02]
gi|384093053|gb|AFH64489.1| IleS [Paenibacillus mucilaginosus K02]
Length = 922
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 329/622 (52%), Gaps = 61/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + L + D +IWTTTPW+LPAN I+ +
Sbjct: 192 SALAEAEIEYK-DKTSSSIYVAFDVADGKGKLPQ---DAAIVIWTTTPWTLPANLGISLH 247
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y G ++A+ L+E + WT D+ V+ G L+ + HP
Sbjct: 248 PDFDYVTVETGGRKFVLAQGLLEAAAKEIGWT---DVKVLATHKGSELELVLCKHPFY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V+ GTG VH AP HG+DDF++ + VL + +QG + +A PG
Sbjct: 303 DRTSLVMTGEHVTLEAGTGCVHTAPGHGEDDFVIGQRYNLGVLCPVDDQGHMTSEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K + L E +L QH YP+DWRTKKPVI +A++QWF ++ + E
Sbjct: 362 EGLFYDKASKAVIEKLQESAHLLHQATIQHQYPHDWRTKKPVIFRATEQWFASIDKFRSE 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++++N+ PE + L + IA+R WCISRQR WGVPIP+FY + +VNEA I+
Sbjct: 422 MLDEIKKINWTPEWGEIRLHNMIAERGDWCISRQRAWGVPIPIFYCRSCNEPLVNEATIE 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKD 765
H + +E G + W+ ++LL + + K DI+D+WFDSG S VL+
Sbjct: 482 HVAKIFEEEGSNAWFLREEKELLPAGTACAKCGHDHFRKETDIMDVWFDSGSSHMAVLEA 541
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GW+ SSL+T VA+K +P++ + HGF +D +G KMSKS+G
Sbjct: 542 REELQWPADLYLEGSDQYRGWYNSSLITGVAVKGQSPYKGILSHGFTLDGEGRKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N + D Q KL G D+LR WV++ V
Sbjct: 602 NTV---DPNQVCNKL--------------------------GADILRLWVSS-TDYQSDV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
I NILN + + +KIR++LR+LLG L + S + +S +D Y + RL
Sbjct: 632 RISDNILNQTSEGYRKIRNTLRFLLGNLSDFSPAADRVSVREMSELDRYAMLRLNRLIER 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +++ + + +F E+SAFY ++KDRLY AR + L+ V
Sbjct: 692 VVAAYENYEFHVVYQAVHHFCAVEMSAFYLDILKDRLYASLPQDPARRAAQTVLYEALTV 751
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
+ + +API+PH ++EV+ ++P
Sbjct: 752 ITKLIAPILPHTSDEVWKYIPG 773
Score = 290 bits (741), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 232/399 (58%), Gaps = 15/399 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y +++ GKP+FILHDGPPYANG HIGHA+NKILKDI +R +QG YVPG
Sbjct: 34 TDIYRQVQKSRKGKPKFILHDGPPYANGDIHIGHALNKILKDIIVRFKTMQGYDAPYVPG 93
Query: 65 WDCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WD HGLPIE +AI + K+ +S + R K +ALE + QK +F+ G+ DW +N
Sbjct: 94 WDTHGLPIE-QAIANGGKVDRKKMSVSEFRDYCKAYALEWVEKQKTQFKRLGIRGDW-NN 151
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T +Y Q+ F + + YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY
Sbjct: 152 PYITLQPKYEAQQIRLFGGMVNKGYIYKGLKPVYWSPSSESALAEAEIEYK-DKTSSSIY 210
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ + L + D +IWTTTPW+LPAN I+ +P +Y G ++A+
Sbjct: 211 VAFDVADGKGKLPQ---DAAIVIWTTTPWTLPANLGISLHPDFDYVTVETGGRKFVLAQG 267
Query: 241 LVE-SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+E + K TD++V+ G L+ + HP R ++ V+ GTG VH
Sbjct: 268 LLEAAAKEIGWTDVKVLATHKGSELELVLCKHPFY--DRTSLVMTGEHVTLEAGTGCVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE-PDVL 358
AP HG+DDF++ + VL + +QG + +A PG EGL K + L E +L
Sbjct: 326 APGHGEDDFVIGQRYNLGVLCPVDDQGHMTSEA-PGFEGLFYDKASKAVIEKLQESAHLL 384
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
QH YP+DWRTKKPVI +A++QWF ++ + E L
Sbjct: 385 HQATIQHQYPHDWRTKKPVIFRATEQWFASIDKFRSEML 423
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +QG + +A PG EGL K + L E +L QH YP+DWRTKKPVI +
Sbjct: 348 VDDQGHMTSEA-PGFEGLFYDKASKAVIEKLQESAHLLHQATIQHQYPHDWRTKKPVIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF ++ + E L ++ +N+ PE + L + IA+R WCISRQR WGVPIP+FY
Sbjct: 407 ATEQWFASIDKFRSEMLDEIKKINWTPEWGEIRLHNMIAERGDWCISRQRAWGVPIPIFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ +VNEA I+H + +E G + W+ ++LL
Sbjct: 467 CRSCNEPLVNEATIEHVAKIFEEEGSNAWFLREEKELL 504
>gi|296532262|ref|ZP_06895004.1| isoleucyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
gi|296267413|gb|EFH13296.1| isoleucyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
Length = 956
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 222/638 (34%), Positives = 327/638 (51%), Gaps = 65/638 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S +Y + PA D A+IWTTTPW++PAN+ +A+
Sbjct: 221 TALAEAEVEYH-DHKSAILYTGFPVLSAPASAAGDLVDALAVIWTTTPWTIPANRAMAYG 279
Query: 478 PALEYSVASVK----------GANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITY 526
++Y++ V+ G +IVA+ L+ K V F G L+
Sbjct: 280 AEIDYALVEVEAAEEGALPRPGQRLIVAEALLGAFAKEVGLARFRVARIFKGTELEGAQA 339
Query: 527 IHPINK-------EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLI 579
HP+ Q + LL +V++ GTGLVH APAHG++DFLLA A I V +
Sbjct: 340 AHPLRAWEGAGEGYQFQVPLLAGDYVTTEAGTGLVHIAPAHGEEDFLLARAHGIAVPECV 399
Query: 580 TNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKA 638
+ G Y+ PG GL++ + L E +L + + HSYP+ WR+KKPVI +A
Sbjct: 400 GDDGTYTVQT-PGFVGLHVFKAHEAVWAALTETGLLLGKGFITHSYPHSWRSKKPVIYRA 458
Query: 639 SQQWFI---DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPV 695
+ QWFI D +I+ ++L + E +FVP+ + + +A RP WCISRQR WGVPI V
Sbjct: 459 TPQWFIAMDDANQIRAKSLQAIAETHFVPDMGRNRIGSMVAARPDWCISRQRAWGVPIAV 518
Query: 696 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKS-NDILDIW 752
F + T ++ ++A + C E G D W+ D + + + DI+D+W
Sbjct: 519 FVEKKTGAVLRDQAVLDRVCAAFAEEGADAWYKPGAAARFLGPDRDPDAYEQVMDIVDVW 578
Query: 753 FDSGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVV 808
F+SG + + VL+D+ PA +Y+EG DQ GWF SSLL SV APF+ + HGFV+
Sbjct: 579 FESGSTHAFVLRDRGLPVPADLYLEGSDQHRGWFHSSLLESVGANGHAPFKAILTHGFVL 638
Query: 809 DEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRW 868
DE G KMSKS+GNV + ++T+ YG D+LR
Sbjct: 639 DETGRKMSKSLGNVTAPQEVTK-----------------------------QYGADILRL 669
Query: 869 WVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYVDVY 925
WV + D + IGKNIL + ++IR++LR+LLG L SES + ++ +
Sbjct: 670 WVMNSDTAD-DLRIGKNILAQQAELYRRIRNTLRWLLGSLEGFSESETLPYAELPELERW 728
Query: 926 MLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLS 985
+L RL E M ++ + + F +LSAFYF + KD LYCD+ + R +
Sbjct: 729 VLHRLTELDGRMRKAVADYDWNGVYPEIHAFCATDLSAFYFDIRKDSLYCDAADSPRRRA 788
Query: 986 GLHTLHNIFHVLLRTVAPIMPHLAEEVY-SHLPSRQGT 1022
L + L +AP+MP AEE + + PS G+
Sbjct: 789 ARTVLDALHRCLTTWLAPVMPFTAEEAWLARFPSEDGS 826
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 224/425 (52%), Gaps = 37/425 (8%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
L+ R G+ +F+LHDGPPYANG HIGHA+NK+LKD+ RS + G+ +Y+PGWD
Sbjct: 56 LWDRLRAQSAGREKFVLHDGPPYANGALHIGHALNKVLKDVVNRSAQMSGRDANYIPGWD 115
Query: 67 CHGLPIELKA-----------ITSKDKLLSP-LDIRKKAKNFALETINTQKAEFESWGVL 114
CHGLPIE K +DK P L+ R + + +A ++ Q+ EF+ GV
Sbjct: 116 CHGLPIEWKVEEEYRNPKGKYQGGRDKDAVPVLEFRAECRAYAAHWLDVQREEFKRLGVA 175
Query: 115 ADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDH 174
DW Y T D + +YR L+PV WSP +TALAE+E+EY DH
Sbjct: 176 GDWAGR-YATMDFPSEAAIAGEIGKFLMNGSLYRGLRPVMWSPVEKTALAEAEVEYH-DH 233
Query: 175 VSKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK--- 231
S +Y + PA D A+IWTTTPW++PAN+ +A+ ++Y++ V+
Sbjct: 234 KSAILYTGFPVLSAPASAAGDLVDALAVIWTTTPWTIPANRAMAYGAEIDYALVEVEAAE 293
Query: 232 -------GANVIVAKCLVESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINK-------E 276
G +IVA+ L+ + K V F G L+ HP+
Sbjct: 294 EGALPRPGQRLIVAEALLGAFAKEVGLARFRVARIFKGTELEGAQAAHPLRAWEGAGEGY 353
Query: 277 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 336
Q + LL +V++ GTGLVH APAHG++DFLLA A I V + + G Y+ PG
Sbjct: 354 QFQVPLLAGDYVTTEAGTGLVHIAPAHGEEDFLLARAHGIAVPECVGDDGTYTVQT-PGF 412
Query: 337 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFI---DTERI 392
GL++ + L E +L + + HSYP+ WR+KKPVI +A+ QWFI D +I
Sbjct: 413 VGLHVFKAHEAVWAALTETGLLLGKGFITHSYPHSWRSKKPVIYRATPQWFIAMDDANQI 472
Query: 393 KPEAL 397
+ ++L
Sbjct: 473 RAKSL 477
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 7/153 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ + G Y+ PG GL++ + L E +L + + HSYP+ WR+KKPVI +
Sbjct: 399 VGDDGTYTVQT-PGFVGLHVFKAHEAVWAALTETGLLLGKGFITHSYPHSWRSKKPVIYR 457
Query: 1168 ASQQWFI---DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
A+ QWFI D +I+ ++L + +FVP+ + + +A RP WCISRQR WGVPI
Sbjct: 458 ATPQWFIAMDDANQIRAKSLQAIAETHFVPDMGRNRIGSMVAARPDWCISRQRAWGVPIA 517
Query: 1225 VFYDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
VF + T ++ ++A + C E G D W+
Sbjct: 518 VFVEKKTGAVLRDQAVLDRVCAAFAEEGADAWY 550
>gi|430755974|ref|YP_007209754.1| Isoleucyl-tRNA synthetase IleRS [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430020494|gb|AGA21100.1| Isoleucyl-tRNA synthetase IleRS [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 921
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLEEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LSAPILPHTADELWSHL 770
Score = 278 bits (711), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLEEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLEEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|157692223|ref|YP_001486685.1| isoleucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
gi|157680981|gb|ABV62125.1| isoleucine--tRNA ligase [Bacillus pumilus SAFR-032]
Length = 921
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 224/617 (36%), Positives = 328/617 (53%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ K+ L D +IWTTTPW+LPAN I +
Sbjct: 192 SALAEAEIEYK-DKRSPSIYVSFKVKDGKGVL---ENDEQFIIWTTTPWTLPANLGICVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV V +VA LVE + T + +VV G+ L ++ HPI RD
Sbjct: 248 PNLEYSVLQVGAERYVVASELVEQVAKTLGFEEYEVVKTLKGKELDNVVAEHPIYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++++ + VL + +G + +A PG EGL
Sbjct: 306 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVSMKYGLDVLCPVDEKGVMTEEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L L ++ HSYP+DWRTKKP I +A+ QWF + + L
Sbjct: 365 FYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTIYRATAQWFASIKDFREALLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + + R WCISRQRVWGVPIPVFY +G+ II +E I+H
Sbjct: 425 NIKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIITDE-TIQHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL++
Sbjct: 484 QLFREHGSNIWFEKEAKELLPEGFTHPGSPNGEFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D++G KMSKS+GN I
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLGNTI 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
D T+ AK+L G ++LR WV++ + P+
Sbjct: 604 ---DPTKVAKQL--------------------------GAEILRLWVSS-VNYQADHPVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+L G L + + ++ R VD Y+L +L + +
Sbjct: 634 DDILKQVAEVYRKIRNTFRFLHGNLFDFDPAVNAVPVEELREVDQYILIKLNKLIEKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDDYEFAVVYHAIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLMALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LTAPILPHTADELWSHL 770
Score = 286 bits (731), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 226/398 (56%), Gaps = 14/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y E G+P FILHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYQMVLERTKGRPTFILHDGPPYANGDIHMGHALNKILKDFIVRFKSMNGFHAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K +S + RK + +A + I Q+ +F+ GV ADW+ N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMSTAEFRKLCEEYAWKQIEGQRNQFKRLGVRADWD-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 VTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYK-DKRSPSIYVS 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L D +IWTTTPW+LPAN I +P LEYSV V +VA LV
Sbjct: 213 FKVKDGKGVL---ENDEQFIIWTTTPWTLPANLGICVHPNLEYSVLQVGAERYVVASELV 269
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E + T + EVV G+ L ++ HPI RD ++ V++ GTG VH AP
Sbjct: 270 EQVAKTLGFEEYEVVKTLKGKELDNVVAEHPIYG--RDSLVMLGDHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++++ + VL + +G + +A PG EGL K L L
Sbjct: 328 GHGEDDFIVSMKYGLDVLCPVDEKGVMTEEA-PGFEGLFYEDANKAITEQLEAKGALKKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
++ HSYP+DWRTKKP I +A+ QWF + + EAL+
Sbjct: 387 DFITHSYPHDWRTKKPTIYRATAQWFASIKDFR-EALL 423
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L L ++ HSYP+DWRTKKP I +A+ QWF
Sbjct: 356 EEAPGFEGLFYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTIYRATAQWFASI 415
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + L ++ +VP + L + + R WCISRQRVWGVPIPVFY +G+ II
Sbjct: 416 KDFREALLDNIKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIIT 475
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I+H L EHG + W+ ++LL
Sbjct: 476 DE-TIQHVSQLFREHGSNIWFEKEAKELL 503
>gi|350589263|ref|XP_003130553.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Sus scrofa]
Length = 567
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/430 (43%), Positives = 259/430 (60%), Gaps = 38/430 (8%)
Query: 613 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLR 672
++L E HSYPYDWRTKKPV+++AS+QWF++ +K A L++V F+PESA +
Sbjct: 7 NLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDVKTTAKDLLKKVKFIPESALNAMV 66
Query: 673 DQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVE 730
D + +RPYWCISRQRVWGVPIPVF+ D ++N ++H L++EHG D WW+L E
Sbjct: 67 DMMDRRPYWCISRQRVWGVPIPVFHHKTKDEFLINSQTVEHIAKLVEEHGSDIWWTLPSE 126
Query: 731 QLLNTSDVNSNV--------TKSNDILDIWFDSGISWSHVL--KDKPAHVYMEGMDQING 780
QLL +V S V DILDIWFDSG SWS+VL D+ A +Y+EG DQ+ G
Sbjct: 127 QLL-PKEVLSQVGGPDALEYVPGRDILDIWFDSGTSWSYVLPGTDQRADLYLEGKDQLGG 185
Query: 781 WFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEK 840
WF SSLLTSVA + +PF+ V +HGF + EKG KMSKS+GNVI + G
Sbjct: 186 WFQSSLLTSVAARRKSPFKTVVVHGFTLGEKGEKMSKSLGNVIDPDVVINGG-------- 237
Query: 841 SVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSS 900
Q K P +G DVLRWWV A ++ V I ++L +++DDV K+R++
Sbjct: 238 ------------QDQSKEPPFGADVLRWWV-AESNVFTEVTISPSVLRAARDDVSKLRNT 284
Query: 901 LRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNF 956
LR+LLG + + T S+ +D YML L + N + Y ++ + + R+L F
Sbjct: 285 LRFLLGNVAGFNPETDSVPVNDMYVIDQYMLHLLQDLANKVTDAYKQYDFGKVVRLLRAF 344
Query: 957 VVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1016
ELS FYF+++KDRLYC++ R S L I VL+R+ API+PHLAEEV+ ++
Sbjct: 345 YTRELSTFYFSIIKDRLYCENAKDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQYV 404
Query: 1017 PSRQGTFSSF 1026
P + S F
Sbjct: 405 PYAKEPKSVF 414
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
Query: 1143 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLR 1202
++L E HSYPYDWRTKKPV+++AS+QWF++ +K A L+ V F+PESA ++
Sbjct: 7 NLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDVKTTAKDLLKKVKFIPESALNAMV 66
Query: 1203 DQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
D + +RPYWCISRQRVWGVPIPVF+ D ++N ++H L++EHG D WW+LP E
Sbjct: 67 DMMDRRPYWCISRQRVWGVPIPVFHHKTKDEFLINSQTVEHIAKLVEEHGSDIWWTLPSE 126
Query: 1261 QLL 1263
QLL
Sbjct: 127 QLL 129
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 396
++L E HSYPYDWRTKKPV+++AS+QWF++ +K A
Sbjct: 7 NLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDVKTTA 47
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSF 1097
SI K LYC++ R S L I VL+R+ API+PHLAEEV+ ++P + S F
Sbjct: 355 SIIKDRLYCENAKDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQYVPYAKEPKSVF 414
>gi|321315308|ref|YP_004207595.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|320021582|gb|ADV96568.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
Length = 921
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGDDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LSAPILPHTADELWSHL 770
Score = 278 bits (711), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGDDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|50548447|ref|XP_501693.1| YALI0C10780p [Yarrowia lipolytica]
gi|49647560|emb|CAG82002.1| YALI0C10780p [Yarrowia lipolytica CLIB122]
Length = 972
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 219/621 (35%), Positives = 340/621 (54%), Gaps = 51/621 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD---LHALIWTTTPWSLPANQFI 474
TALAE+ELEY P H S+++++ LN+ L E D L +IWTTTPW+L AN+
Sbjct: 229 TALAEAELEYNPKHKSQAVFVAFPLNEKSDTLAEVTKDYPDLAIVIWTTTPWTLVANRAC 288
Query: 475 AFNPALEYSVA--SVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPIN 531
+ + +EY+V + G +++V K LVE+L ++++V D G L TY +P+
Sbjct: 289 SVHKDVEYAVVRQTCSGRHLLVGKKLVESLSEKLG-ELEIVGDGIFGSELTSSTYTNPLT 347
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS---PD 588
+ A +VS GTG+VH AP HGQDD+L + I + + G Y+ P+
Sbjct: 348 DTHH--PIYHADYVSDESGTGMVHSAPGHGQDDYLFCMGHGIAPYSPVNASGHYTSDLPE 405
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
L G ++LG+G+ V+ L + +L E+Y HSYPYDWR+KKP+I++++ QWF +
Sbjct: 406 KLADLAGKHVLGEGQKAVIALATKNKMLLQKESYTHSYPYDWRSKKPIIIRSTPQWFANV 465
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
+ IK + + L++V FVP+ +K L+ + R WCISRQR WGVPIP+ Y ++ +
Sbjct: 466 DDIKEDTIKALDQVEFVPKIGEKRLKAFVNGRTEWCISRQRSWGVPIPIVYSKESGAPLE 525
Query: 705 NEANIKHFCTLIDEHGPDFWW--SLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHV 762
+ + + I E G D W+ ++ VEQ L + + + +D+WFDSG SW
Sbjct: 526 DVETVSYVIDRIAELGTDAWFDENVGVEQFLPNKFNADDYVRGTETMDVWFDSGSSWKST 585
Query: 763 LKD---KPAHVYMEGMDQINGWFMSSLLTSVALKH----TAPFRNVFLHGFVVDEKGAKM 815
L+ K A VY EG DQ GWF SSLLT ++ TAP+++V HGF++DEKG KM
Sbjct: 586 LEARGIKQADVYFEGSDQHRGWFQSSLLTKISTSSEAVPTAPYKSVITHGFLLDEKGNKM 645
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNV+ LP+ I G K LPA G+D +R WV A +
Sbjct: 646 SKSLGNVL-----------LPS------------TIINGGKGLPALGIDGIRLWV-AQSD 681
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS--RYVDVYMLKRLCEF 933
V IG IL + +K+R++ R+LLG L + + + VD L+ L +
Sbjct: 682 FTNDVAIGPVILKHVGEFTRKLRTTFRFLLGNLGYGKQVDLNYADLHLVDRIALQDLHQL 741
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ T Y + Q+ R + + + + LS+FYF + K+RLY + ++ ++R S + L +
Sbjct: 742 EVTCKDYYSKHQFNRVYQQISHHMNTCLSSFYFDIAKERLYVNDVSSQSRQSVAYVLSEV 801
Query: 994 FHVLLRTVAPIMPHLAEEVYS 1014
L ++P+ P L +EV++
Sbjct: 802 LKTYLAILSPLTPLLTQEVHN 822
Score = 308 bits (790), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/411 (41%), Positives = 244/411 (59%), Gaps = 24/411 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+W + +P F+LHDGPPYANG H+GH +NK+ KDI R L+ GKRV YVPGW
Sbjct: 68 QLYTWNAANKSREP-FVLHDGPPYANGALHVGHVLNKVTKDIINRYQLISGKRVDYVPGW 126
Query: 66 DCHGLPIELKAITSKDK--------LLSPLDIRKKAKNFALETINTQKAEFESWGVLADW 117
DCHGLPIELKA+ + K +L IR+ A+ A +TI +Q+ EF G++ DW
Sbjct: 127 DCHGLPIELKALETLSKKLKTDAATVLPAHTIREMARKHATDTIESQRNEFRGLGIMGDW 186
Query: 118 EHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
E N Y T E+ QL F L + +YR +KPVYW +RTALAE+ELEY P H S+
Sbjct: 187 E-NPYLTMSHEFEVAQLRIFQELLTRGRMYRKIKPVYWGWETRTALAEAELEYNPKHKSQ 245
Query: 178 SIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFIAFNPALEYSVA--SVKG 232
++++ LN+ L E DL +IWTTTPW+L AN+ + + +EY+V + G
Sbjct: 246 AVFVAFPLNEKSDTLAEVTKDYPDLAIVIWTTTPWTLVANRACSVHKDVEYAVVRQTCSG 305
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCD-FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSS 291
+++V K LVESL ++E+V D G L TY +P+ + A +VS
Sbjct: 306 RHLLVGKKLVESLSEKLG-ELEIVGDGIFGSELTSSTYTNPLTDTHH--PIYHADYVSDE 362
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS---PDAGPGLEGLNILGDGKDQ 348
GTG+VH AP HGQDD+L + I + + G Y+ P+ L G ++LG+G+
Sbjct: 363 SGTGMVHSAPGHGQDDYLFCMGHGIAPYSPVNASGHYTSDLPEKLADLAGKHVLGEGQKA 422
Query: 349 VLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
V+ L + +L E+Y HSYPYDWR+KKP+I++++ QWF + + IK + +
Sbjct: 423 VIALATKNKMLLQKESYTHSYPYDWRSKKPIIIRSTPQWFANVDDIKEDTI 473
Score = 119 bits (299), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 1117 PDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFI 1174
P+ L G ++LGEG+ V+ L + +L E+Y HSYPYDWR+KKP+I++++ QWF
Sbjct: 404 PEKLADLAGKHVLGEGQKAVIALATKNKMLLQKESYTHSYPYDWRSKKPIIIRSTPQWFA 463
Query: 1175 DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--I 1232
+ + IK + + L+ V FVP+ +K L+ + R WCISRQR WGVPIP+ Y ++
Sbjct: 464 NVDDIKEDTIKALDQVEFVPKIGEKRLKAFVNGRTEWCISRQRSWGVPIPIVYSKESGAP 523
Query: 1233 IVNEANIKHFCTLIDEHGPDFWW--SLPVEQLL 1263
+ + + + I E G D W+ ++ VEQ L
Sbjct: 524 LEDVETVSYVIDRIAELGTDAWFDENVGVEQFL 556
>gi|402297356|ref|ZP_10817128.1| isoleucyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
gi|401727406|gb|EJT00596.1| isoleucyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
Length = 924
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 225/622 (36%), Positives = 329/622 (52%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + LEG D +IWTTTPW++PAN I+ +
Sbjct: 193 SALAEAEIEYH-DKRSPSIYVAFDVVD-GKKALEG--DEKFIIWTTTPWTIPANLAISVH 248
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P LEYSV V+ +VA + LV+ L W +V+ G L+ + HPI
Sbjct: 249 PDLEYSVVLVENNKYVVASGLLETLVKELDWATH---EVLKTVKGSELEFVLTQHPIY-- 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+R ++ V+ GTG VH AP HG+DD+L+ + VL + ++G Y D PG
Sbjct: 304 ERTSVVILGEHVTLDAGTGCVHTAPGHGEDDYLVGQKYGLDVLCPVDDKG-YLTDEAPGF 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L ++ HSY +DWRTKKPVI +A+ QWF E + E
Sbjct: 363 EGLFYDAANKPIGEKLEEVGALLKLSFITHSYAHDWRTKKPVIYRATAQWFASIENFRSE 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +EEV ++P+ + L + + R WCISRQR WGVPIPVFY +G+ II +E I
Sbjct: 423 LLKAIEEVEWIPKWGETRLFNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TID 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ EQLL + N T+ DI+D+WFDSG S VL++
Sbjct: 482 HVSALFREHGSNIWFEWETEQLLPEGFTSEHSPNGTFTREMDIMDVWFDSGSSHQAVLEE 541
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL T VA+ P++ + HGF +D +G KMSKS+G
Sbjct: 542 REELQRPADLYLEGSDQYRGWFNSSLSTGVAVTGKTPYKAILSHGFALDGQGRKMSKSIG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N + +D+ + G D+LR WVA+ V
Sbjct: 602 NTVIPNDV-----------------------------MKQLGADILRLWVAS-VDYQADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
+ IL + +KIR++ R+LLG LH+ + +T ++ V+++ML +L E
Sbjct: 632 RVSDEILKQVSESYRKIRNTFRFLLGNLHDFNPTTDQVADEQLDGVNLFMLVKLNEVVEK 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ T Y E+ ++ +L NF ELS+FY L KD LY + + AR + ++
Sbjct: 692 VKTAYEEYNFSGVYHILHNFCTIELSSFYMDLAKDTLYIEHSDHPARRAIQTVMYETVVK 751
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + ++PI+PH A+EV+ ++P+
Sbjct: 752 LSKLISPILPHTADEVWENIPN 773
Score = 263 bits (671), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 170/400 (42%), Positives = 225/400 (56%), Gaps = 19/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E GKP FILHDGPPYANG H+GHA+NKILKD+ +R + G YVPGW
Sbjct: 36 DIYQKVQERTKGKPLFILHDGPPYANGDIHMGHALNKILKDMIVRYKSMSGFHAPYVPGW 95
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE S K K +S RK + +AL+ ++ Q+ +F GV DW N Y
Sbjct: 96 DTHGLPIETALTKSGKVKRKEMSVAAFRKLCEEYALKQVDRQREQFLRLGVRGDW-WNPY 154
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T DK Y Q+ F ++ K+ YIY+ KPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 155 ITLDKAYEAQQIKVFGDMAKKGYIYKGKKPVYWSPSSESALAEAEIEYH-DKRSPSIYVA 213
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ LEG D +IWTTTPW++PAN I+ +P LEYSV V+ +VA L+
Sbjct: 214 FDVVD-GKKALEG--DEKFIIWTTTPWTIPANLAISVHPDLEYSVVLVENNKYVVASGLL 270
Query: 243 ES----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+ L W EV+ G L+ + HPI +R ++ V+ GTG VH
Sbjct: 271 ETLVKELDWATH---EVLKTVKGSELEFVLTQHPIY--ERTSVVILGEHVTLDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+L+ + VL + ++G Y D PG EGL K L E L
Sbjct: 326 TAPGHGEDDYLVGQKYGLDVLCPVDDKG-YLTDEAPGFEGLFYDAANKPIGEKLEEVGAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSY +DWRTKKPVI +A+ QWF E + E L
Sbjct: 385 LKLSFITHSYAHDWRTKKPVIYRATAQWFASIENFRSELL 424
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 88/157 (56%), Gaps = 14/157 (8%)
Query: 1115 YSPDAGPGLEGL------NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
Y D PG EGL +GE ++V L++ + HSY +DWRTKKPVI +A
Sbjct: 354 YLTDEAPGFEGLFYDAANKPIGEKLEEVGALLKLSFI-----THSYAHDWRTKKPVIYRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY- 1227
+ QWF E + E L +E V ++P+ + L + + R WCISRQR WGVPIPVFY
Sbjct: 409 TAQWFASIENFRSELLKAIEEVEWIPKWGETRLFNMVRDRGDWCISRQRAWGVPIPVFYG 468
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ EQLL
Sbjct: 469 ENGEPIITDE-TIDHVSALFREHGSNIWFEWETEQLL 504
>gi|423522273|ref|ZP_17498746.1| isoleucyl-tRNA synthetase 1, partial [Bacillus cereus HuA4-10]
gi|401176022|gb|EJQ83221.1| isoleucyl-tRNA synthetase 1, partial [Bacillus cereus HuA4-10]
Length = 889
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 224/641 (34%), Positives = 331/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ +V I+A L E ++ T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVNVNDEKYIIASELFETVEKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EG+
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I +
Sbjct: 424 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISNVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + ++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPGENKVAAADLREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N + R + L+++ L +
Sbjct: 693 AYEAYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + + ++ G+ A
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEVVEVDGAEA 793
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 232/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ +V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVNVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVEKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDFL+ + VL + ++G + +A PG EG+ K L E L
Sbjct: 328 HGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGIFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EG+ K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGIFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L +E +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I + L EHG + W+ + LL
Sbjct: 475 DE-TISNVADLFREHGSNVWFEREAKDLL 502
>gi|296331119|ref|ZP_06873593.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674274|ref|YP_003865946.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296151763|gb|EFG92638.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412518|gb|ADM37637.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 921
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RLIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGENRFVVASALVENVASACGFDQYEVTRTIKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDAKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERED 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LSAPILPHTADELWSHL 770
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RLIIWTTTPWTIPANLGISVHPDLEYSVIAVGENRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTIKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDAKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|443632788|ref|ZP_21116967.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347611|gb|ELS61669.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 921
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 222/617 (35%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVVAVGEDRFVVASALVENVASACGFDQYEVTRTIKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ +I +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPVITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERED 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LSAPILPHTADELWSHL 770
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVVAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTIKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ +I +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPVITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|424781968|ref|ZP_18208820.1| Isoleucyl-tRNA synthetase [Campylobacter showae CSUNSWCD]
gi|421959908|gb|EKU11514.1| Isoleucyl-tRNA synthetase [Campylobacter showae CSUNSWCD]
Length = 918
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 230/676 (34%), Positives = 349/676 (51%), Gaps = 76/676 (11%)
Query: 389 TERIKPEALVCKTVGNILGR-VGITHDRP-------GTALAESELEYKPDHISKSIYLKI 440
T + K EA + KT+ + R + I +P +ALAE+E+EY+ D SIY+
Sbjct: 157 TMKFKFEAEIYKTLCKVAKRGLLIERSKPVYWSWAARSALAEAEVEYE-DKEDYSIYVAF 215
Query: 441 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 500
KL + A + G D A+IWTTTPW+LPANQ I+ NP Y + + N+I AK ++
Sbjct: 216 KLGEEAAAKI-GTKDASAVIWTTTPWTLPANQAISLNPNEIYVLTA---ENLIFAKEMLS 271
Query: 501 NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 560
L+ T +++ +F L+++ ++P+N R + V+ GTGLVH AP H
Sbjct: 272 ELEKEGLTKGEILKEFAAAELENLHAVNPLN--GRKSLFILGDHVTMDGGTGLVHTAPGH 329
Query: 561 GQDDFLLALAEKIPVLNLITNQGKYS---------PDA-GPGLEGLNILGDGKDQVLHLV 610
G+DD+ ++L I V+ + G Y PD L G++I +++L L+
Sbjct: 330 GEDDYHVSLKYGIEVIMPVDEGGLYDETLKAKKLFPDGVADELIGMHIFK-ANEKILELL 388
Query: 611 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE-------ALACLEEVNFV 663
++L + HSYP+ WRT KPVI +A++QWFI + K E AL LE V F
Sbjct: 389 GSNLLKVSKFVHSYPFCWRTHKPVIYRATKQWFIAMDEPKIEGKTLREVALKELENVKFY 448
Query: 664 PESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGP 721
P S K + I RP WCISRQR WGVPI F DT I ++ + + + ++ G
Sbjct: 449 PASGVKRIGSMIENRPDWCISRQRDWGVPIAFFRHKDTKEPIFDDEILDNVAAIFEQKGA 508
Query: 722 DFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-------PAHVYM 772
D WW ++ LL N N+ K DILD+WFDSG +W+ VLK PA +Y+
Sbjct: 509 DAWWDSEIKDLLPANCKYDPQNLEKVMDILDVWFDSGSTWAAVLKSGDYDAGSYPADMYL 568
Query: 773 EGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGA 832
EG DQ GWF SSLL S A + AP+R+V HGF VDE G KMSKS GNV++ D+ +
Sbjct: 569 EGSDQHRGWFQSSLLLSCAAQGRAPYRSVLTHGFTVDENGQKMSKSKGNVVAPADVAK-- 626
Query: 833 KKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQD 892
YGV++LR WVA + + I +NIL +
Sbjct: 627 ---------------------------TYGVEILRLWVAL-SDYSSDLKISENILKQVSE 658
Query: 893 DVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRV 952
+KIR+++R+LL +++ + S +D ++L R + + + + + +++ +
Sbjct: 659 QYRKIRNTIRFLLANVNDLEDIETSNFNILDRWILSRAKKAFDEAEAAFRNYDFSKGFSL 718
Query: 953 LLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV 1012
L+NF+ +LS Y + KDRLYCD+ + + R S + I LL +AP + + +EV
Sbjct: 719 LMNFLSADLSGIYLDICKDRLYCDAKDSDTRRSAQSAMALITRALLPLIAPTLTYTVDEV 778
Query: 1013 YSHLPS--RQGTFSSF 1026
+ P + G +F
Sbjct: 779 MDYAPEIIKNGAADAF 794
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 224/399 (56%), Gaps = 28/399 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA---I 77
F LHDGPPYANG HIGHA+NK LKDI L+++ G+ V + PGWDCHGLPIE + +
Sbjct: 52 FTLHDGPPYANGNIHIGHALNKTLKDIILKTHYFFGENVRFTPGWDCHGLPIEQQVEVKL 111
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH---NCYHTFDKEYVKNQL 134
K K LS IR+ + A E I+ Q+ F+ GV +DW+ F+ E K L
Sbjct: 112 GDKKKSLSKTQIRELCREHAREFIDVQRESFKQLGVASDWDDPYLTMKFKFEAEIYKT-L 170
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
C+ + K+ + KPVYWS ++R+ALAE+E+EY+ D SIY+ KL + A +
Sbjct: 171 CK---VAKRGLLIERSKPVYWSWAARSALAEAEVEYE-DKEDYSIYVAFKLGEEAAAKI- 225
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIE 254
G D A+IWTTTPW+LPANQ I+ NP Y + + N+I AK ++ L+ T E
Sbjct: 226 GTKDASAVIWTTTPWTLPANQAISLNPNEIYVLTA---ENLIFAKEMLSELEKEGLTKGE 282
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
++ +F L+++ ++P+N R + V+ GTGLVH AP HG+DD+ ++L
Sbjct: 283 ILKEFAAAELENLHAVNPLN--GRKSLFILGDHVTMDGGTGLVHTAPGHGEDDYHVSLKY 340
Query: 315 KIPVLNLITNQGKYS---------PDA-GPGLEGLNILGDGKDQVLHLVEPDVLWTENYQ 364
I V+ + G Y PD L G++I +++L L+ ++L +
Sbjct: 341 GIEVIMPVDEGGLYDETLKAKKLFPDGVADELIGMHIFK-ANEKILELLGSNLLKVSKFV 399
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVG 403
HSYP+ WRT KPVI +A++QWFI + K E + V
Sbjct: 400 HSYPFCWRTHKPVIYRATKQWFIAMDEPKIEGKTLREVA 438
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 11/160 (6%)
Query: 1114 KYSPDA-GPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQW 1172
K PD L G++I + +++L L+ ++L + HSYP+ WRT KPVI +A++QW
Sbjct: 362 KLFPDGVADELIGMHIF-KANEKILELLGSNLLKVSKFVHSYPFCWRTHKPVIYRATKQW 420
Query: 1173 FIDTERIKPE-------ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
FI + K E AL LE V F P S K + I RP WCISRQR WGVPI
Sbjct: 421 FIAMDEPKIEGKTLREVALKELENVKFYPASGVKRIGSMIENRPDWCISRQRDWGVPIAF 480
Query: 1226 FYDGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F DT I ++ + + + ++ G D WW ++ LL
Sbjct: 481 FRHKDTKEPIFDDEILDNVAAIFEQKGADAWWDSEIKDLL 520
>gi|327357633|gb|EGE86490.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 1021
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 235/644 (36%), Positives = 333/644 (51%), Gaps = 54/644 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQF 473
TALAE+ELEYK DHIS + +K L +P+ L +++ A+IWTTTPW+LPAN
Sbjct: 206 TALAEAELEYKDDHISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAA 265
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFP--GQYLQDITYIHPI 530
IA +P L+YSV S + +++ E ++ Q D V P G L P+
Sbjct: 266 IAVSPTLDYSVVKSERHGYLVIGSSRREYIQSLLQDDEITVIGSPILGSELVSKATYRPL 325
Query: 531 NKEQRD-LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K+ D +++ A FV++ G+GLVHCAP HG +D+ + A I + + G ++ A
Sbjct: 326 FKDGSDPQRVIAADFVTADSGSGLVHCAPGHGMEDYEVCQAHGITFHTPVDDGGLFTEAA 385
Query: 590 GPG----LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
P L G +L +G +VL VE +L Y+H YPYDWR+K PVI++A++QWF
Sbjct: 386 MPSNPSMLSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKLPVIVRATEQWF 445
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
D I+ A+ LE+V FVP + K L + R WCISRQR WGVPIP Y +T
Sbjct: 446 ADVGDIRDNAIRALEDVQFVPATGKSRLESFVKNRSEWCISRQRAWGVPIPALYHRETGE 505
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-------LLNTSDVNSNVTKSNDILDIWFD 754
I+ + ++ H +IDE G D WW+ + LL TS S + D +D+WFD
Sbjct: 506 AILTQESVTHIMKVIDERGIDAWWTDNENDPAWIPAALLETS-AGSAYKRGTDTMDVWFD 564
Query: 755 SGISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK---------HTAPFRN 800
SG SW+ V ++ A VY+EG DQ GWF SSLLT VA APF+
Sbjct: 565 SGSSWTQVKATASVEGYAADVYLEGTDQHRGWFQSSLLTYVAYNLALGKNAGLSRAPFKT 624
Query: 801 VFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPA 860
+ HGF +D+ KMSKS+GNVIS I G P K + K P
Sbjct: 625 LITHGFTLDKDSRKMSKSIGNVISPSQIMDGTLLPPLKLKKMKGQTE-------KPKSPV 677
Query: 861 Y---GVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
Y GVD LR WVA+ +KD + IG+ +L + ++ K R + + LLG L + S
Sbjct: 678 YDALGVDALRLWVASSDYTKD--IVIGQPVLKAVNTNLHKYRVTFKLLLGSLQDFDPSRA 735
Query: 917 ---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
R +D L +L T Y F++ + + + E SAFY +KDRL
Sbjct: 736 VPHESLRIIDRIALLQLRNLVTTCQDAYSSFEFYKVVTAITKWANLEFSAFYIESLKDRL 795
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
Y DS + +R + TL +I++ +AP++P L EE + H P
Sbjct: 796 YADSPDSLSRRAAQTTLCHIYYHFQNLLAPLVPLLVEESWEHTP 839
Score = 286 bits (731), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 166/417 (39%), Positives = 231/417 (55%), Gaps = 44/417 (10%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQ+ F+LHDGPP DI R L GKR+ +VPGW
Sbjct: 59 DLYAWQQRHRPNDNRFVLHDGPP-----------------DIICRVQLAAGKRIDFVPGW 101
Query: 66 DCHGLPIELKAITSKDKLLSPLD-----------IRKKAKNFALETINTQKAEFESWGVL 114
DCHGLPIELKA+ ++ K L L+ IRK A+ A T+ QK F+ W V+
Sbjct: 102 DCHGLPIELKALQTQ-KELGRLEAGENGNGVAAAIRKAARQLAERTVLEQKKGFQKWAVM 160
Query: 115 ADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDH 174
ADWE + T DK + KNQL F + ++ IYR KPVYWSPSSRTALAE+ELEYK DH
Sbjct: 161 ADWE-GVWKTMDKSFEKNQLDVFLKMVEKGLIYRRFKPVYWSPSSRTALAEAELEYKDDH 219
Query: 175 VSKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-S 229
+S + +K L +P+ L +++ A+IWTTTPW+LPAN IA +P L+YSV S
Sbjct: 220 ISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAAIAVSPTLDYSVVKS 279
Query: 230 VKGANVIVAKCLVESLKWTFQTDIEVVCDFP--GQYLQDITYIHPINKEQRD-LKLLPAG 286
+ +++ E ++ Q D V P G L P+ K+ D +++ A
Sbjct: 280 ERHGYLVIGSSRREYIQSLLQDDEITVIGSPILGSELVSKATYRPLFKDGSDPQRVIAAD 339
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNIL 342
FV++ G+GLVHCAP HG +D+ + A I + + G ++ A P L G +L
Sbjct: 340 FVTADSGSGLVHCAPGHGMEDYEVCQAHGITFHTPVDDGGLFTEAAMPSNPSMLSGKPVL 399
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+ A+
Sbjct: 400 CEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKLPVIVRATEQWFADVGDIRDNAI 456
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKK 1162
+ + G ++ A P L G +L EG +VL VE +L Y+H YPYDWR+K
Sbjct: 375 VDDGGLFTEAAMPSNPSMLSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKL 434
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ A+ LE V FVP + K L + R WCISRQR WGVP
Sbjct: 435 PVIVRATEQWFADVGDIRDNAIRALEDVQFVPATGKSRLESFVKNRSEWCISRQRAWGVP 494
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y +T I+ + ++ H +IDE G D WW+
Sbjct: 495 IPALYHRETGEAILTQESVTHIMKVIDERGIDAWWT 530
>gi|350265856|ref|YP_004877163.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349598743|gb|AEP86531.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 921
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTIKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDAKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERED 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LSAPILPHTADELWSHL 770
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTIKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDAKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|269123856|ref|YP_003306433.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
gi|268315182|gb|ACZ01556.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
Length = 928
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 328/620 (52%), Gaps = 59/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EYK D S SIY+K+ L L G + +IWTTTPW++PAN I+ N
Sbjct: 196 TALAEAEIEYK-DVESDSIYVKMNLTDETNEKL-GVENAAVIIWTTTPWTIPANLAISLN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
Y V + N+I++K L E +++ + G+ + +TY HPI R
Sbjct: 254 ENFVYGVYKTEKGNLILSKSLAEKAFNEMNLSFELIKEIQGKDFERLTYKHPIY--DRVS 311
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
L+ V+ GTG VH AP HG DD+ ++L I +L+ + ++G + +A P EGL
Sbjct: 312 MLILGDHVTEDAGTGCVHTAPGHGVDDYNVSLKYGIGILSPVDDKGHMTSEA-PRYEGL- 369
Query: 598 ILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE-RIKPEAL 654
++ +E +L + HSYP+DWR+KKPVI +A++QWFI + ++ L
Sbjct: 370 FYKKANSAIMADLENSGHLLGHKKLVHSYPHDWRSKKPVIFRATEQWFIKVDGEVRENTL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHF 712
LEEV FVP + + + RP W ISRQRVWGVPIP+FY+ T ++ +
Sbjct: 430 EKLEEVEFVPAWGRNRITSMMENRPDWTISRQRVWGVPIPIFYNAKTNEVVYESEIMSRV 489
Query: 713 CTLIDEHGPDFWWSLSV-----EQLL---NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
L+++ G D WW S E+LL N DV + K ILD+WFDSG+S VL+
Sbjct: 490 IDLVEKEGTDIWWKYSAKDIIGEELLIKHNLKDVE--LRKERSILDVWFDSGVSHRAVLR 547
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ P +Y+EG DQ GWF SSLLTSVA +P++ + HGFV+D +G KMSKS+
Sbjct: 548 PRGYNIRPVDLYLEGSDQHRGWFQSSLLTSVASTFDSPYKKLLTHGFVMDGQGRKMSKSL 607
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ DI + +G D+LR WV++ ++
Sbjct: 608 GNTITPKDI-----------------------------IDVHGADILRLWVSSVDYRE-D 637
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR---YVDVYMLKRLCEFQNT 936
V I NI+ D +KIR++ RYLLG +++ S +D + + +L E +
Sbjct: 638 VRISDNIIQQMTDSYRKIRNTARYLLGNINDFDRSNKVAYDDMLEIDKWAMHKLEELKEK 697
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +++ + +L F E+S+FY ++KDRLYC+ + R S L +I V
Sbjct: 698 VTKHYENYEFYSLFQEILYFCSVEMSSFYLDIIKDRLYCEYKDSLERRSAQSVLVDILDV 757
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L+R ++P++ AEE++ L
Sbjct: 758 LVRIISPVLSFTAEEIWERL 777
Score = 300 bits (767), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/386 (41%), Positives = 231/386 (59%), Gaps = 12/386 (3%)
Query: 10 WQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+++ N KP F LHDGPPYANG HIGHA+NK+LKDI L+ LQG Y+PGWD HG
Sbjct: 43 YEKSLDNEKPTFFLHDGPPYANGNLHIGHAINKVLKDIILKYKRLQGFNAPYIPGWDTHG 102
Query: 70 LPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFD 126
LPIE K I K K +SPL++R K +AL+++ QK +F G+L DW +N Y T +
Sbjct: 103 LPIEWKMIQDLGEKAKEMSPLELRNACKKYALKSVEMQKKDFIRLGILGDW-NNPYITLN 161
Query: 127 KEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN 186
KE+ +L F ++Y+ Y+Y+ LKPVYWSP++ TALAE+E+EYK D S SIY+K+ L
Sbjct: 162 KEFEAEELRVFRDIYENGYVYKGLKPVYWSPTTETALAEAEIEYK-DVESDSIYVKMNLT 220
Query: 187 QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
L G + +IWTTTPW++PAN I+ N Y V + N+I++K L E
Sbjct: 221 DETNEKL-GVENAAVIIWTTTPWTIPANLAISLNENFVYGVYKTEKGNLILSKSLAEKAF 279
Query: 247 WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
E++ + G+ + +TY HPI R L+ V+ GTG VH AP HG D
Sbjct: 280 NEMNLSFELIKEIQGKDFERLTYKHPIY--DRVSMLILGDHVTEDAGTGCVHTAPGHGVD 337
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D+ ++L I +L+ + ++G + +A P EGL ++ +E +L +
Sbjct: 338 DYNVSLKYGIGILSPVDDKGHMTSEA-PRYEGL-FYKKANSAIMADLENSGHLLGHKKLV 395
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTE 390
HSYP+DWR+KKPVI +A++QWFI +
Sbjct: 396 HSYPHDWRSKKPVIFRATEQWFIKVD 421
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTE-RIKPEALACLEGVNFVPESAKKSLRDQIAQRPY 1210
HSYP+DWR+KKPVI +A++QWFI + ++ L LE V FVP + + + RP
Sbjct: 396 HSYPHDWRSKKPVIFRATEQWFIKVDGEVRENTLEKLEEVEFVPAWGRNRITSMMENRPD 455
Query: 1211 WCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQRVWGVPIP+FY+ T ++ + L+++ G D WW + ++
Sbjct: 456 WTISRQRVWGVPIPIFYNAKTNEVVYESEIMSRVIDLVEKEGTDIWWKYSAKDII 510
>gi|423522274|ref|ZP_17498747.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus HuA4-10]
gi|401174968|gb|EJQ82171.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus HuA4-10]
Length = 752
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 224/641 (34%), Positives = 331/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 22 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 77
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ +V I+A L E ++ T + + +VV G L+ HP RD
Sbjct: 78 PELEYAIVNVNDEKYIIASELFETVEKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 135
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDFL+ + VL + ++G + +A PG EG+
Sbjct: 136 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEA-PGFEGI 194
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 195 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 254
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I +
Sbjct: 255 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISNVA 313
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 314 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 373
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 374 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 433
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 434 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 463
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + ++ R VD YML +L + +
Sbjct: 464 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPGENKVAAADLREVDRYMLVKLNDLITKVKE 523
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N + R + L+++ L +
Sbjct: 524 AYEAYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTK 583
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + + ++ G+ A
Sbjct: 584 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEVVEVDGAEA 624
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 149/260 (57%), Gaps = 9/260 (3%)
Query: 140 LYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATDL 199
+ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+ + ++LEG D
Sbjct: 1 MAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DE 56
Query: 200 HALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQ-TDIEVVCD 258
+IWTTTPW+LPAN I+ +P LEY++ +V I+A L E+++ T + + EVV
Sbjct: 57 KFIIWTTTPWTLPANLGISVHPELEYAIVNVNDEKYIIASELFETVEKTLEWENAEVVKT 116
Query: 259 FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPV 318
G L+ HP RD ++ V++ GTG VH AP HG+DDFL+ + V
Sbjct: 117 VKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEV 174
Query: 319 LNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 377
L + ++G + +A PG EG+ K L E L + HSYP+DWRTKKP+
Sbjct: 175 LCPVDDKGVLTNEA-PGFEGIFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 233
Query: 378 ILKASQQWFIDTERIKPEAL 397
I +A+ QWF E + E L
Sbjct: 234 IFRATAQWFASIEAFRKELL 253
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L + HSYP+DWRTKKP+I +A+ QWF E
Sbjct: 188 APGFEGIFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEA 247
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ E L +E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E
Sbjct: 248 FRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE 307
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I + L EHG + W+ + LL
Sbjct: 308 -TISNVADLFREHGSNVWFEREAKDLL 333
>gi|443894889|dbj|GAC72236.1| predicted proline-serine-threonine phosphatase-interacting protein
[Pseudozyma antarctica T-34]
Length = 1190
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 236/678 (34%), Positives = 348/678 (51%), Gaps = 114/678 (16%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG-------ATDLHALIWTTTPWSLPA 470
TALAESELEY+ DH SK++Y+ L P LLE A L +IWTTTPWSLP+
Sbjct: 348 TALAESELEYRDDHTSKAVYVAFDLIAGPT-LLEKLGPHAHHARQLKPIIWTTTPWSLPS 406
Query: 471 NQFIAFNPALEYSV---ASVKGANVIVAKCLVENLKWTFQTD--------------IDVV 513
N I NP LEYS+ +G ++A +E L+ + D ++ V
Sbjct: 407 NMAINVNPDLEYSIVRRTDSQGPCYLIASDRIEALE-SLPVDHSPDHDGDPQLFGPVEEV 465
Query: 514 CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLL----A 568
F G L D TY P++ + +L A +V++ GTGLVH APAHG +D+ +
Sbjct: 466 ARFRGADLADSTYRSPLSSSPTAARPILMADYVTALSGTGLVHSAPAHGGEDYQIWKQQG 525
Query: 569 LAEKIPVLNLITNQGKYSPDA-----------------GPGLEGLNILGDGKDQVLHLV- 610
+ + + + +QG YS + G L G +LG+G +V+ ++
Sbjct: 526 RLQTDGIFSPVNDQGCYSSEILQLDASESSESRGDTSIGRRLIGKEVLGEGAREVISILK 585
Query: 611 EPDVL-WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKK 669
E D L +H YPYDWR+K+PVI++A+ QWF + +RIK +A+ L V FVP +++
Sbjct: 586 ERDALVCAHTLRHKYPYDWRSKQPVIVRATAQWFANLDRIKQQAIDALRTVVFVPANSRA 645
Query: 670 TLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSL 727
L I R WCISRQRVWGVPIPV YD D ++ NI+H ++++ G D+WW
Sbjct: 646 RLEAFITGRSEWCISRQRVWGVPIPVLYDVATDEPLMTVENIEHIASVLESKGTDYWWEA 705
Query: 728 SVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK---------------PAHV 770
++ + D + K D +D+WFDSG SW+ LKD+ A V
Sbjct: 706 DAQEFVAPQCRDEKRSWRKGEDTVDVWFDSGTSWA-TLKDQLALESPETGSSGPSSIADV 764
Query: 771 YMEGMDQINGWFMSSLLTSVALKHT-----APFRNVFLHGFVVDEKGAKMSKSVGNVISA 825
Y+EG DQ GWF SSL+T+VA AP++ V HG+V+D + KMSKS+GNVIS
Sbjct: 765 YLEGSDQHRGWFQSSLITAVATTPEGQTPIAPYKTVVTHGYVLDNESRKMSKSLGNVISP 824
Query: 826 HDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPTVPIGK 884
I +G K GA + PAYG+DVLR WVA + + DP PIG
Sbjct: 825 LTIIKGGK--------------------GASQ-PAYGIDVLRLWVARSDYTTDP--PIGD 861
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHN-------HSESTGSISRYV--DVYMLKRLCEFQN 935
I+ + + ++K+R++ R++L L + + R+V ++Y+L+R C
Sbjct: 862 TIIAKTAETLRKLRNTARFMLANLPSGQAIIPLQRSQMRLLDRFVMHELYLLERACA--- 918
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y + +A+ R L F LS Y + KD LY D+++ R + + + I
Sbjct: 919 ---AAYEAYDFAQVVRRLTEFANAILSNLYLDVGKDCLYLDAVDDPRRQTMVSVIDAILR 975
Query: 996 VLLRTVAPIMPHLAEEVY 1013
+ +API P L+EE++
Sbjct: 976 TMTGIMAPITPFLSEEIH 993
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/449 (41%), Positives = 258/449 (57%), Gaps = 57/449 (12%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
CG ELY+WQR + +F+ HDGPPYANG H GHA+NKILKDIT R +L+ KRVH+
Sbjct: 186 CG--ELYAWQRARHDSTGDFVFHDGPPYANGHLHCGHALNKILKDITNRYQVLRRKRVHF 243
Query: 62 VPGWDCHGLPIELKAITSKDKLLSP----LDIRKKAKNFALETINTQKAEFESWGVLADW 117
+PGWDCHGLPIE KA+ + P DIR +A+ A+E I TQK EF ++G++ADW
Sbjct: 244 MPGWDCHGLPIEAKALANVSPQERPKWTSKDIRTRARREAMEAIETQKQEFRTFGIMADW 303
Query: 118 EH-NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVS 176
+ + Y T D Y QL F + ++ IYR +PVYWSPS+RTALAESELEY+ DH S
Sbjct: 304 SNTSTYRTLDPAYEARQLRVFGEMVRKGLIYRQYRPVYWSPSNRTALAESELEYRDDHTS 363
Query: 177 KSIYLKIKLNQVPAHLLEG-------ATDLHALIWTTTPWSLPANQFIAFNPALEYSV-- 227
K++Y+ L P LLE A L +IWTTTPWSLP+N I NP LEYS+
Sbjct: 364 KAVYVAFDLIAGPT-LLEKLGPHAHHARQLKPIIWTTTPWSLPSNMAINVNPDLEYSIVR 422
Query: 228 -ASVKGANVIVAKCLVESLKWTFQTD--------------IEVVCDFPGQYLQDITYIHP 272
+G ++A +E+L+ + D +E V F G L D TY P
Sbjct: 423 RTDSQGPCYLIASDRIEALE-SLPVDHSPDHDGDPQLFGPVEEVARFRGADLADSTYRSP 481
Query: 273 INKEQRDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLL----ALAEKIPVLNLITNQGK 327
++ + +L A +V++ GTGLVH APAHG +D+ + + + + + +QG
Sbjct: 482 LSSSPTAARPILMADYVTALSGTGLVHSAPAHGGEDYQIWKQQGRLQTDGIFSPVNDQGC 541
Query: 328 YSPD-----------------AGPGLEGLNILGDGKDQVLHLV-EPDVL-WTENYQHSYP 368
YS + G L G +LG+G +V+ ++ E D L +H YP
Sbjct: 542 YSSEILQLDASESSESRGDTSIGRRLIGKEVLGEGAREVISILKERDALVCAHTLRHKYP 601
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
YDWR+K+PVI++A+ QWF + +RIK +A+
Sbjct: 602 YDWRSKQPVIVRATAQWFANLDRIKQQAI 630
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 92/148 (62%), Gaps = 4/148 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLV-EPDVL-WTENYQHSYPYDWRTKKPVILKASQQWFIDTE 1177
G L G +LGEG +V+ ++ E D L +H YPYDWR+K+PVI++A+ QWF + +
Sbjct: 564 GRRLIGKEVLGEGAREVISILKERDALVCAHTLRHKYPYDWRSKQPVIVRATAQWFANLD 623
Query: 1178 RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVN 1235
RIK +A+ L V FVP +++ L I R WCISRQRVWGVPIPV YD D ++
Sbjct: 624 RIKQQAIDALRTVVFVPANSRARLEAFITGRSEWCISRQRVWGVPIPVLYDVATDEPLMT 683
Query: 1236 EANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
NI+H ++++ G D+WW ++ +
Sbjct: 684 VENIEHIASVLESKGTDYWWEADAQEFV 711
>gi|255025946|ref|ZP_05297932.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
Length = 921
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YM+ +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMMIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 225/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|261188850|ref|XP_002620838.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239591980|gb|EEQ74561.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
Length = 1069
Score = 359 bits (922), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 235/644 (36%), Positives = 333/644 (51%), Gaps = 54/644 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQF 473
TALAE+ELEYK DHIS + +K L +P+ L +++ A+IWTTTPW+LPAN
Sbjct: 254 TALAEAELEYKDDHISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAA 313
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFP--GQYLQDITYIHPI 530
IA +P L+YSV S + +++ E ++ Q D V P G L P+
Sbjct: 314 IAVSPTLDYSVVKSERHGYLVIGSSRREYIQSLLQDDEITVIGSPILGSELVSKATYRPL 373
Query: 531 NKEQRD-LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K+ D +++ A FV++ G+GLVHCAP HG +D+ + A I + + G ++ A
Sbjct: 374 FKDGSDPQRVIAADFVTADSGSGLVHCAPGHGMEDYEVCQAHGITFHTPVDDGGLFTEAA 433
Query: 590 GPG----LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
P L G +L +G +VL VE +L Y+H YPYDWR+K PVI++A++QWF
Sbjct: 434 MPSNPSMLSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKLPVIVRATEQWF 493
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
D I+ A+ LE+V FVP + K L + R WCISRQR WGVPIP Y +T
Sbjct: 494 ADVGDIRDNAIRALEDVQFVPATGKSRLESFVKNRSEWCISRQRAWGVPIPALYHRETGE 553
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-------LLNTSDVNSNVTKSNDILDIWFD 754
I+ + ++ H +IDE G D WW+ + LL TS S + D +D+WFD
Sbjct: 554 AILTQESVTHIMKVIDERGIDAWWTDNENDPAWIPAALLETS-AGSAYKRGTDTMDVWFD 612
Query: 755 SGISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK---------HTAPFRN 800
SG SW+ V ++ A VY+EG DQ GWF SSLLT VA APF+
Sbjct: 613 SGSSWTQVKATASVEGYAADVYLEGTDQHRGWFQSSLLTYVAYNLALGKNAGLSRAPFKT 672
Query: 801 VFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPA 860
+ HGF +D+ KMSKS+GNVIS I G P K + K P
Sbjct: 673 LITHGFTLDKDSRKMSKSIGNVISPSQIMDGTLLPPLKLKKMKGQTE-------KPKSPV 725
Query: 861 Y---GVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
Y GVD LR WVA+ +KD + IG+ +L + ++ K R + + LLG L + S
Sbjct: 726 YDALGVDALRLWVASSDYTKD--IVIGQPVLKAVNTNLHKYRVTFKLLLGSLQDFDPSRA 783
Query: 917 ---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
R +D L +L T Y F++ + + + E SAFY +KDRL
Sbjct: 784 VPHESLRIIDRIALLQLRNLVTTCQDAYSSFEFYKVVTAITKWANLEFSAFYIESLKDRL 843
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
Y DS + +R + TL +I++ +AP++P L EE + H P
Sbjct: 844 YADSPDSLSRRAAQTTLCHIYYHFQNLLAPLVPLLVEESWEHTP 887
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 246/417 (58%), Gaps = 27/417 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQ+ F+LHDGPPYANG H+GHA+NKILKDI R L GKR+ +VPGW
Sbjct: 90 DLYAWQQRHRPNDNRFVLHDGPPYANGDLHVGHALNKILKDIICRVQLAAGKRIDFVPGW 149
Query: 66 DCHGLPIELKAITSKDKLLSPLD-----------IRKKAKNFALETINTQKAEFESWGVL 114
DCHGLPIELKA+ ++ K L L+ IRK A+ A T+ QK F+ W V+
Sbjct: 150 DCHGLPIELKALQTQ-KELGRLEAGENGNGVAAAIRKAARQLAERTVLEQKKGFQKWAVM 208
Query: 115 ADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDH 174
ADWE + T DK + KNQL F + ++ IYR KPVYWSPSSRTALAE+ELEYK DH
Sbjct: 209 ADWE-GVWKTMDKSFEKNQLDVFLKMVEKGLIYRRFKPVYWSPSSRTALAEAELEYKDDH 267
Query: 175 VSKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-S 229
+S + +K L +P+ L +++ A+IWTTTPW+LPAN IA +P L+YSV S
Sbjct: 268 ISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAAIAVSPTLDYSVVKS 327
Query: 230 VKGANVIVAKCLVESLKWTFQTDIEVVCDFP--GQYLQDITYIHPINKEQRD-LKLLPAG 286
+ +++ E ++ Q D V P G L P+ K+ D +++ A
Sbjct: 328 ERHGYLVIGSSRREYIQSLLQDDEITVIGSPILGSELVSKATYRPLFKDGSDPQRVIAAD 387
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNIL 342
FV++ G+GLVHCAP HG +D+ + A I + + G ++ A P L G +L
Sbjct: 388 FVTADSGSGLVHCAPGHGMEDYEVCQAHGITFHTPVDDGGLFTEAAMPSNPSMLSGKPVL 447
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+ A+
Sbjct: 448 CEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKLPVIVRATEQWFADVGDIRDNAI 504
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 1123 LEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
L G +L EG +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+
Sbjct: 441 LSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKLPVIVRATEQWFADVGDIR 500
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 1238
A+ LE V FVP + K L + R WCISRQR WGVPIP Y +T I+ + +
Sbjct: 501 DNAIRALEDVQFVPATGKSRLESFVKNRSEWCISRQRAWGVPIPALYHRETGEAILTQES 560
Query: 1239 IKHFCTLIDEHGPDFWWS 1256
+ H +IDE G D WW+
Sbjct: 561 VTHIMKVIDERGIDAWWT 578
>gi|428279138|ref|YP_005560873.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|291484095|dbj|BAI85170.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
Length = 921
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LSAPILPHTADELWSHL 770
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|239615331|gb|EEQ92318.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
Length = 1090
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 235/644 (36%), Positives = 333/644 (51%), Gaps = 54/644 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQF 473
TALAE+ELEYK DHIS + +K L +P+ L +++ A+IWTTTPW+LPAN
Sbjct: 275 TALAEAELEYKDDHISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAA 334
Query: 474 IAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDIDVVCDFP--GQYLQDITYIHPI 530
IA +P L+YSV S + +++ E ++ Q D V P G L P+
Sbjct: 335 IAVSPTLDYSVVKSERHGYLVIGSSRREYIQSLLQDDEITVIGSPILGSELVSKATYRPL 394
Query: 531 NKEQRD-LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K+ D +++ A FV++ G+GLVHCAP HG +D+ + A I + + G ++ A
Sbjct: 395 FKDGSDPQRVIAADFVTADSGSGLVHCAPGHGMEDYEVCQAHGITFHTPVDDGGLFTEAA 454
Query: 590 GPG----LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
P L G +L +G +VL VE +L Y+H YPYDWR+K PVI++A++QWF
Sbjct: 455 MPSNPSMLSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKLPVIVRATEQWF 514
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
D I+ A+ LE+V FVP + K L + R WCISRQR WGVPIP Y +T
Sbjct: 515 ADVGDIRDNAIRALEDVQFVPATGKSRLESFVKNRSEWCISRQRAWGVPIPALYHRETGE 574
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQ-------LLNTSDVNSNVTKSNDILDIWFD 754
I+ + ++ H +IDE G D WW+ + LL TS S + D +D+WFD
Sbjct: 575 AILTQESVTHIMKVIDERGIDAWWTDNENDPAWIPAALLETS-AGSAYKRGTDTMDVWFD 633
Query: 755 SGISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK---------HTAPFRN 800
SG SW+ V ++ A VY+EG DQ GWF SSLLT VA APF+
Sbjct: 634 SGSSWTQVKATASVEGYAADVYLEGTDQHRGWFQSSLLTYVAYNLALGKNAGLSRAPFKT 693
Query: 801 VFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPA 860
+ HGF +D+ KMSKS+GNVIS I G P K + K P
Sbjct: 694 LITHGFTLDKDSRKMSKSIGNVISPSQIMDGTLLPPLKLKKMKGQTE-------KPKSPV 746
Query: 861 Y---GVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
Y GVD LR WVA+ +KD + IG+ +L + ++ K R + + LLG L + S
Sbjct: 747 YDALGVDALRLWVASSDYTKD--IVIGQPVLKAVNTNLHKYRVTFKLLLGSLQDFDPSRA 804
Query: 917 ---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
R +D L +L T Y F++ + + + E SAFY +KDRL
Sbjct: 805 VPHESLRIIDRIALLQLRNLVTTCQDAYSSFEFYKVVTAITKWANLEFSAFYIESLKDRL 864
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
Y DS + +R + TL +I++ +AP++P L EE + H P
Sbjct: 865 YADSPDSLSRRAAQTTLCHIYYHFQNLLAPLVPLLVEESWEHTP 908
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 246/417 (58%), Gaps = 27/417 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+WQ+ F+LHDGPPYANG H+GHA+NKILKDI R L GKR+ +VPGW
Sbjct: 111 DLYAWQQRHRPNDNRFVLHDGPPYANGDLHVGHALNKILKDIICRVQLAAGKRIDFVPGW 170
Query: 66 DCHGLPIELKAITSKDKLLSPLD-----------IRKKAKNFALETINTQKAEFESWGVL 114
DCHGLPIELKA+ ++ K L L+ IRK A+ A T+ QK F+ W V+
Sbjct: 171 DCHGLPIELKALQTQ-KELGRLEAGENGNGVAAAIRKAARQLAERTVLEQKKGFQKWAVM 229
Query: 115 ADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDH 174
ADWE + T DK + KNQL F + ++ IYR KPVYWSPSSRTALAE+ELEYK DH
Sbjct: 230 ADWE-GVWKTMDKSFEKNQLDVFLKMVEKGLIYRRFKPVYWSPSSRTALAEAELEYKDDH 288
Query: 175 VSKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-S 229
+S + +K L +P+ L +++ A+IWTTTPW+LPAN IA +P L+YSV S
Sbjct: 289 ISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAAIAVSPTLDYSVVKS 348
Query: 230 VKGANVIVAKCLVESLKWTFQTDIEVVCDFP--GQYLQDITYIHPINKEQRD-LKLLPAG 286
+ +++ E ++ Q D V P G L P+ K+ D +++ A
Sbjct: 349 ERHGYLVIGSSRREYIQSLLQDDEITVIGSPILGSELVSKATYRPLFKDGSDPQRVIAAD 408
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNIL 342
FV++ G+GLVHCAP HG +D+ + A I + + G ++ A P L G +L
Sbjct: 409 FVTADSGSGLVHCAPGHGMEDYEVCQAHGITFHTPVDDGGLFTEAAMPSNPSMLSGKPVL 468
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+G +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+ A+
Sbjct: 469 CEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKLPVIVRATEQWFADVGDIRDNAI 525
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 1123 LEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
L G +L EG +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+
Sbjct: 462 LSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPYDWRSKLPVIVRATEQWFADVGDIR 521
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 1238
A+ LE V FVP + K L + R WCISRQR WGVPIP Y +T I+ + +
Sbjct: 522 DNAIRALEDVQFVPATGKSRLESFVKNRSEWCISRQRAWGVPIPALYHRETGEAILTQES 581
Query: 1239 IKHFCTLIDEHGPDFWWS 1256
+ H +IDE G D WW+
Sbjct: 582 VTHIMKVIDERGIDAWWT 599
>gi|449094236|ref|YP_007426727.1| isoleucyl-tRNA synthetase [Bacillus subtilis XF-1]
gi|449028151|gb|AGE63390.1| isoleucyl-tRNA synthetase [Bacillus subtilis XF-1]
Length = 923
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 194 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 249
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 250 PDLEYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 307
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 308 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 366
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 367 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 426
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 427 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 485
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 486 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERED 545
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 546 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 605
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 606 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 635
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 636 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 695
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 696 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 755
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 756 LSAPILPHTADELWSHL 772
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 37 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 96
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 97 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 156 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 214
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 215 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 271
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 272 ENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 330 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 388
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 389 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 425
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 360 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 419
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 420 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 479
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 480 -TIEHVSELFRQHGSNIWFEKEAKDLL 505
>gi|315283055|ref|ZP_07871330.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
gi|313613297|gb|EFR87166.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
Length = 921
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ NL K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPNLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TISHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELTRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFQPTVNAVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSRDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV+++L
Sbjct: 752 KLLAPILPHTTEEVWNNL 769
Score = 262 bits (670), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 223/400 (55%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+P +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ + Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVEGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+L K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PNLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TISHISELFREHGSNVWFERDVKDLL 502
>gi|386054273|ref|YP_005971831.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
gi|346646924|gb|AEO39549.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
Length = 921
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YM+ +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMMIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (678), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 225/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|311068064|ref|YP_003972987.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|419823955|ref|ZP_14347488.1| isoleucyl-tRNA ligase [Bacillus atrophaeus C89]
gi|310868581|gb|ADP32056.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|388471992|gb|EIM08782.1| isoleucyl-tRNA ligase [Bacillus atrophaeus C89]
Length = 920
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 220/617 (35%), Positives = 324/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFAVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV SV G + A LVEN+ + +V+ G+ L++I HP+ RD
Sbjct: 248 PDLEYSVISVGGDRFVAASALVENVASACGFEQYEVLKTLKGKELENIVAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLEEKGALMNLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRTDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ALFREHGSNIWFEKEAKDLLPEGFTHPGSPNGKFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGQAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + +++ R VD Y+L +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKANAVAVEDLREVDQYILVKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L +
Sbjct: 694 AYDEYEFAVVYHSIHNFCTVELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALAK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH +E+++HL
Sbjct: 754 LTAPILPHTTDELWAHL 770
Score = 282 bits (722), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 224/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE K K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVKRKEMSVAEFRKLCEEYAWQQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV SV G + A LV
Sbjct: 213 FAVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVISVGGDRFVAASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ + EV+ G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFEQYEVLKTLKGKELENIVAEHPLYG--RDSLVMLGDHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIVGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLEEKGALMNL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRTDLL 423
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLEEKGALMNLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRTDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L EHG + W+ + LL
Sbjct: 478 -TIEHVSALFREHGSNIWFEKEAKDLL 503
>gi|386758265|ref|YP_006231481.1| isoleucyl-tRNA synthetase [Bacillus sp. JS]
gi|384931547|gb|AFI28225.1| isoleucyl-tRNA synthetase [Bacillus sp. JS]
Length = 921
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDAKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEELREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LSAPILPHTADELWSHL 770
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRFKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDAKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|170097321|ref|XP_001879880.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645283|gb|EDR09531.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1039
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 342/660 (51%), Gaps = 91/660 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-------NQVPAHLLEGATDLHALIWTTTPWSLPA 470
+ALAE+EL YK DH+S S+++K ++ N LL T ++ L+WTTTPW+L A
Sbjct: 241 SALAEAELVYKDDHVSHSVFVKFQVDRDSPIQNDTLKQLLATETSVNLLVWTTTPWTLTA 300
Query: 471 NQFIAFNPALEYSVASV-----KGANVIVAKCLVENLKWTF-QTDIDVVCDFPGQYLQDI 524
N IA NP L Y+ +G +IV+ +E+L QTD+ V F G L D+
Sbjct: 301 NMGIAINPELTYAAVKTIEKEPQGDVIIVSYDRLEHLTPAIGQTDLLVT--FKGSELIDL 358
Query: 525 TYIHPINK---EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF--LLALAEKIPVLNLI 579
Y +K LK++ A V++ GTGLVHCAPAHG +D+ L+L N+I
Sbjct: 359 RYTAIFSKLVPASEPLKIISASHVTAESGTGLVHCAPAHGAEDYHAFLSLGLISTSHNII 418
Query: 580 TN---QGKYS--------PDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPY 626
+ +G+++ DA L G +L DG V+ L+ ++ + +H YPY
Sbjct: 419 CHVDKEGQFNRNVADVVGDDAAGKLVGRAVLTDGSRAVVELLREMGSLVKIQRVKHRYPY 478
Query: 627 DWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQ 686
DW+T +P+I+ A+ QWF + + IK +ALA LE V+F P ++ L + R WCISRQ
Sbjct: 479 DWKTNEPIIVTATSQWFANLDDIKDKALAALENVSFFPPVSQNRLESFVRSRSEWCISRQ 538
Query: 687 RVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN----S 740
RVWGVPIP + + DT I++ ++H ++++E G WW VE L S + S
Sbjct: 539 RVWGVPIPSLHHIEKDTAILDSTTLEHILSVLEEKGVAHWWDGPVEDFLTPSLLQQAPAS 598
Query: 741 NVTKSNDILDIWFDSGISWSH-----VLKDKP------AHVYMEGMDQINGWFMSSLLTS 789
+ K D +D+WFDSG SWS V KD A V +EG DQ GWF S +LTS
Sbjct: 599 SWRKGTDTMDVWFDSGTSWSMLPEMGVGKDDTTGRKFDADVCLEGSDQHRGWFQSQMLTS 658
Query: 790 VALK-----HTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGN 844
+ +P+ + HG V+DEKG KMSKS+GN+IS + G K
Sbjct: 659 IGAAPADSDPASPYGALITHGMVLDEKGKKMSKSLGNIISPLTVINGGKD---------- 708
Query: 845 VISAHDITQGAKKL-PAYGVDVLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLR 902
KKL P YG DVLR WVA +D V IG +L + ++KIR+S R
Sbjct: 709 -----------KKLEPVYGADVLRLWVATIDYWRD--VSIGPTVLAQVAESMRKIRNSAR 755
Query: 903 YLLGVLHNHS-------ESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLN 955
+ LG + + E G RYV + L + + T Y + + + L +
Sbjct: 756 FCLGNIGDKQTFKRVPREKMGLAERYV----MHELYQLEQTALEAYASYNFLKVVNALSH 811
Query: 956 FVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
F LS+ YF + KD LY D+ G+ R + + L +I + + +API+PHLAEE+++H
Sbjct: 812 FANITLSSLYFDITKDCLYADTPGGQQRRAVMTVLEHILTTMTKVMAPILPHLAEEIHAH 871
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 250/429 (58%), Gaps = 39/429 (9%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY WQ G P F+LHDGPPYANG H+GHA+NKILKDI R ++ G RVHYVPGWD
Sbjct: 83 LYRWQWNYAKG-PLFVLHDGPPYANGDLHMGHALNKILKDIINRYHVSLGHRVHYVPGWD 141
Query: 67 CHGLPIELKAITSKDKLLSPL---DIRKKAKNFALETINTQKAEFESWGVLADW--EHNC 121
CHGLPIE KA+ ++ S L DIR A++ AL I++Q+++F++ G++ADW E
Sbjct: 142 CHGLPIENKALQDLNRSFSALSSGDIRSAARDTALREISSQQSQFQALGIMADWDSEEGT 201
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D Y QL F + ++ IYR +PV++SPSSR+ALAE+EL YK DHVS S+++
Sbjct: 202 YRTLDHSYEMRQLRIFQKMVEKGMIYRHYRPVHYSPSSRSALAEAELVYKDDHVSHSVFV 261
Query: 182 KIKL-------NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---- 230
K ++ N LL T ++ L+WTTTPW+L AN IA NP L Y+
Sbjct: 262 KFQVDRDSPIQNDTLKQLLATETSVNLLVWTTTPWTLTANMGIAINPELTYAAVKTIEKE 321
Query: 231 -KGANVIVAKCLVESLKWTF-QTDIEVVCDFPGQYLQDITYIHPINK---EQRDLKLLPA 285
+G +IV+ +E L QTD+ V F G L D+ Y +K LK++ A
Sbjct: 322 PQGDVIIVSYDRLEHLTPAIGQTDLLVT--FKGSELIDLRYTAIFSKLVPASEPLKIISA 379
Query: 286 GFVSSSKGTGLVHCAPAHGQDDF--LLALAEKIPVLNLITN---QGKYS--------PDA 332
V++ GTGLVHCAPAHG +D+ L+L N+I + +G+++ DA
Sbjct: 380 SHVTAESGTGLVHCAPAHGAEDYHAFLSLGLISTSHNIICHVDKEGQFNRNVADVVGDDA 439
Query: 333 GPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 390
L G +L DG V+ L+ ++ + +H YPYDW+T +P+I+ A+ QWF + +
Sbjct: 440 AGKLVGRAVLTDGSRAVVELLREMGSLVKIQRVKHRYPYDWKTNEPIIVTATSQWFANLD 499
Query: 391 RIKPEALVC 399
IK +AL
Sbjct: 500 DIKDKALAA 508
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 4/153 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFID 1175
DA L G +L +G V+ L+ ++ + +H YPYDW+T +P+I+ A+ QWF +
Sbjct: 438 DAAGKLVGRAVLTDGSRAVVELLREMGSLVKIQRVKHRYPYDWKTNEPIIVTATSQWFAN 497
Query: 1176 TERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTII 1233
+ IK +ALA LE V+F P ++ L + R WCISRQRVWGVPIP + + DT I
Sbjct: 498 LDDIKDKALAALENVSFFPPVSQNRLESFVRSRSEWCISRQRVWGVPIPSLHHIEKDTAI 557
Query: 1234 VNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
++ ++H ++++E G WW PVE L S
Sbjct: 558 LDSTTLEHILSVLEEKGVAHWWDGPVEDFLTPS 590
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 1039 IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1086
I K LY D+ G+ R + + L +I + + +API+PHLAEE+++H
Sbjct: 824 ITKDCLYADTPGGQQRRAVMTVLEHILTTMTKVMAPILPHLAEEIHAH 871
>gi|418033310|ref|ZP_12671787.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|351469458|gb|EHA29634.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SC-8]
Length = 923
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 222/617 (35%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 194 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 249
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 250 PDLEYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 307
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 308 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 366
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 367 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 426
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ +I +E I+H
Sbjct: 427 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPVITDET-IEHVS 485
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 486 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 545
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 546 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 605
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 606 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 635
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 636 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 695
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 696 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 755
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 756 LSAPILPHTADELWSHL 772
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 37 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 96
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 97 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 156 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 214
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 215 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 271
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 272 ENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 330 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 388
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 389 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 425
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 360 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 419
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ +I +E
Sbjct: 420 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPVITDE 479
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 480 -TIEHVSELFRQHGSNIWFEKEAKDLL 505
>gi|386044326|ref|YP_005963131.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
gi|404411320|ref|YP_006696908.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
gi|345537560|gb|AEO07000.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
gi|404231146|emb|CBY52550.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
Length = 921
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 225/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|138894671|ref|YP_001125124.1| isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
gi|166200211|sp|A4IM25.1|SYI_GEOTN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|134266184|gb|ABO66379.1| Isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
Length = 924
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 222/626 (35%), Positives = 332/626 (53%), Gaps = 56/626 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + +L+G D +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVAFPVKDGKG-VLQG--DERIVIWTTTPWTIPANLAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y + G +VA L E++ + VV G+ L+ + HP +RD
Sbjct: 247 PDLDYYIVEANGQKYVVAAALAESVAKEVGWEAWSVVKTVKGKELEYVVAKHPFY--ERD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ +PVL + +G Y + PG G+
Sbjct: 305 SLVVCGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLPVLCPVDERG-YMTEEAPGFAGM 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTK+P I +A+ QWF ++I+ + L
Sbjct: 364 FYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKQPTIFRATTQWFASIDKIRDQLLD 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE + + + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 424 AIKETKWVPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDE-TIEHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + S N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFRQYGSNVWFEREAKDLLPEGFTHPSSPNGLFTKETDIMDVWFDSGSSHQAVLVERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GNV+
Sbjct: 543 LERPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WVA+ V I
Sbjct: 603 -----------VPA------------------KVMEQLGADILRLWVAS-VDYQADVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
NIL + +KIR++ R++LG L + + ++ +D YML +L + +
Sbjct: 633 DNILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPVGELGELDRYMLAKLNKLIAKVKK 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + +F ELSAFY + KD LY ++ + AR + L+ L +
Sbjct: 693 AYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAADCRARRAVQTVLYETVVALAK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSS 1025
+API+PH A+EV+ H+P+R+ S
Sbjct: 753 LIAPILPHTADEVWEHIPNRKEQVES 778
Score = 279 bits (714), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 228/397 (57%), Gaps = 14/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKILKDI +R + G YVPGW
Sbjct: 35 DIYRKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGFCAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE A+T + K +S + RK + +A E I+ Q+ +F+ GV DW+ N Y
Sbjct: 95 DTHGLPIE-TALTKQGVDRKSMSVAEFRKLCEQYAYEQIDNQRQQFKRLGVRGDWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ IY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 153 ITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ +L+G D +IWTTTPW++PAN IA +P L+Y + G +VA L
Sbjct: 212 FPVKDGKG-VLQG--DERIVIWTTTPWTIPANLAIAVHPDLDYYIVEANGQKYVVAAALA 268
Query: 243 ESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES+ + VV G+ L+ + HP +RD ++ V++ GTG VH AP
Sbjct: 269 ESVAKEVGWEAWSVVKTVKGKELEYVVAKHPFY--ERDSLVVCGEHVTTDAGTGCVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++ +PVL + +G Y + PG G+ K L E L
Sbjct: 327 GHGEDDFIVGQKYGLPVLCPVDERG-YMTEEAPGFAGMFYDEANKAITQKLEEVGALLKL 385
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTK+P I +A+ QWF ++I+ + L
Sbjct: 386 SFITHSYPHDWRTKQPTIFRATTQWFASIDKIRDQLL 422
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 1110 TNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKA 1168
++ Y + PG G+ K L E L ++ HSYP+DWRTK+P I +A
Sbjct: 347 VDERGYMTEEAPGFAGMFYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKQPTIFRA 406
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY- 1227
+ QWF ++I+ + L ++ +VPE + + + + R WCISRQR WGVPIPVFY
Sbjct: 407 TTQWFASIDKIRDQLLDAIKETKWVPEWGEIRIHNMVRDRGDWCISRQRAWGVPIPVFYG 466
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I+H L ++G + W+ + LL
Sbjct: 467 ENGEPIITDE-TIEHVSNLFRQYGSNVWFEREAKDLL 502
Score = 47.4 bits (111), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 1026 FCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1085
FC ++ Y +AK ILY ++ + AR + L+ L + +API+PH A+EV+
Sbjct: 709 FCTVELSAFYL-DMAKDILYIEAADCRARRAVQTVLYETVVALAKLIAPILPHTADEVWE 767
Query: 1086 HLPSRQGTFSS 1096
H+P+R+ S
Sbjct: 768 HIPNRKEQVES 778
>gi|10434190|dbj|BAB14164.1| unnamed protein product [Homo sapiens]
Length = 567
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 257/421 (61%), Gaps = 38/421 (9%)
Query: 613 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLR 672
++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A L++V F+P SA +
Sbjct: 7 NLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMV 66
Query: 673 DQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVE 730
+ + +RPYWCISRQRVWGVPIPVF+ D ++N +H L+++HG D WW+L E
Sbjct: 67 EMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPE 126
Query: 731 QLLNTSDVNSNV--------TKSNDILDIWFDSGISWSHVL--KDKPAHVYMEGMDQING 780
QLL +V S V DILDIWFDSG SWS+VL D+ A +Y+EG DQ+ G
Sbjct: 127 QLL-PKEVLSEVGGPDALEYVPGQDILDIWFDSGTSWSYVLPGPDQRADLYLEGKDQLGG 185
Query: 781 WFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEK 840
WF SSLLTSVA + A ++ V +HGF + EKG KMSKS+GNVI + G
Sbjct: 186 WFQSSLLTSVAARKRALYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGG-------- 237
Query: 841 SVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSS 900
Q K P YG DVLRWWV A ++ V IG ++LN+++DD+ K+R++
Sbjct: 238 ------------QDQSKEPPYGADVLRWWV-ADSNVFTEVAIGPSVLNAARDDISKLRNT 284
Query: 901 LRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNF 956
LR+LLG + + + T SI +D YML L + N + LY ++ + + R+L F
Sbjct: 285 LRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTF 344
Query: 957 VVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1016
ELS FYF+++KDRLYC+ N R S L I V++R+ API+PHLAEEV+ H+
Sbjct: 345 YTRELSNFYFSIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHI 404
Query: 1017 P 1017
P
Sbjct: 405 P 405
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 85/123 (69%), Gaps = 2/123 (1%)
Query: 1143 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLR 1202
++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A L+ V F+P SA +
Sbjct: 7 NLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMV 66
Query: 1203 DQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
+ + +RPYWCISRQRVWGVPIPVF+ D ++N +H L+++HG D WW+LP E
Sbjct: 67 EMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYLINSQTTEHIVKLVEQHGSDIWWTLPPE 126
Query: 1261 QLL 1263
QLL
Sbjct: 127 QLL 129
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 18/130 (13%)
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV----GNIL-GRV 409
++L E HSYPYDWRTKKPV+++AS+QWFI+ IK A + K V G+ L G V
Sbjct: 7 NLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIPGSALNGMV 66
Query: 410 GITHDRPGTALAESELEYKP----DHISKSIYLKIKLN-QVPAHLLEGATDLHALIWTTT 464
+ RP ++ + P H +K YL +N Q H+++ + IW
Sbjct: 67 EMMDRRPYWCISRQRVWGVPIPVFHHKTKDEYL---INSQTTEHIVKLVEQHGSDIW--- 120
Query: 465 PWSLPANQFI 474
W+LP Q +
Sbjct: 121 -WTLPPEQLL 129
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1088
SI K LYC+ N R S L I V++R+ API+PHLAEEV+ H+P
Sbjct: 355 SIIKDRLYCEKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP 405
>gi|221309417|ref|ZP_03591264.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221313742|ref|ZP_03595547.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221318666|ref|ZP_03599960.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221322939|ref|ZP_03604233.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|255767358|ref|NP_389426.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|402775788|ref|YP_006629732.1| isoleucyl-tRNA synthetase [Bacillus subtilis QB928]
gi|452914523|ref|ZP_21963150.1| isoleucine--tRNA ligase [Bacillus subtilis MB73/2]
gi|239938843|sp|Q45477.3|SYI_BACSU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|225184985|emb|CAB13417.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|402480971|gb|AFQ57480.1| Isoleucyl-tRNA synthetase [Bacillus subtilis QB928]
gi|407958950|dbj|BAM52190.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|407964527|dbj|BAM57766.1| isoleucyl-tRNA synthetase [Bacillus subtilis BEST7003]
gi|452116943|gb|EME07338.1| isoleucine--tRNA ligase [Bacillus subtilis MB73/2]
Length = 921
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 222/617 (35%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ +I +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPVITDET-IEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LSAPILPHTADELWSHL 770
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ +I +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPVITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|16804058|ref|NP_465543.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|386050994|ref|YP_005968985.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
gi|404284516|ref|YP_006685413.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
gi|405759070|ref|YP_006688346.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
gi|81508283|sp|Q8Y5N8.1|SYI_LISMO RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|16411472|emb|CAD00097.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|346424840|gb|AEO26365.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
gi|404234018|emb|CBY55421.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
gi|404236952|emb|CBY58354.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
Length = 921
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 225/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+P +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|223040686|ref|ZP_03610955.1| isoleucyl-tRNA synthetase [Campylobacter rectus RM3267]
gi|222878050|gb|EEF13162.1| isoleucyl-tRNA synthetase [Campylobacter rectus RM3267]
Length = 918
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 229/676 (33%), Positives = 351/676 (51%), Gaps = 76/676 (11%)
Query: 389 TERIKPEALVCKTVGNILGR-VGITHDRP-------GTALAESELEYKPDHISKSIYLKI 440
T + K EA + KT+ + R + I +P +ALAE+E+EY+ D SIY+
Sbjct: 157 TMKFKFEAEIYKTLCKVAKRGLLIERSKPVYWSWAARSALAEAEVEYE-DKEDYSIYVAF 215
Query: 441 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 500
KL + A + GA D A+IWTTTPW+LPANQ I+ +P+ Y + S N+I AK ++
Sbjct: 216 KLGEEAAAKI-GAKDARAVIWTTTPWTLPANQAISLSPSEIYVLTS---ENLIFAKEMLG 271
Query: 501 NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 560
L+ T +++ +F L+++ ++P+N R + V+ GTGLVH AP H
Sbjct: 272 ELEKEGLTKGEILKEFAATELENLHAVNPLN--GRKSLFILGDHVTMDGGTGLVHTAPGH 329
Query: 561 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----------LEGLNILGDGKDQVLHLV 610
G+DD+ ++L I V+ + G Y L G++I +++L L+
Sbjct: 330 GEDDYHVSLKYGIEVIMPVDEGGLYDETLKAKKLFPSGVVDELIGMHIF-KANEKILELL 388
Query: 611 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE-------ALACLEEVNFV 663
++L + HSYP+ WRT KPVI +A++QWFI + K E AL LE V F
Sbjct: 389 GSNLLKVSKFVHSYPFCWRTHKPVIYRATKQWFIAMDEPKIEGKTLREVALKELENVKFY 448
Query: 664 PESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGP 721
P S K + I RP WCISRQR WGVPI F DT I ++ + + + ++ G
Sbjct: 449 PASGVKRIGSMIENRPDWCISRQRDWGVPIAFFRRKDTKEPIFDDEILDNVAAIFEQKGA 508
Query: 722 DFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-------PAHVYM 772
D WW ++ LL N N+ K DILD+WFDSG +W+ VLK PA +Y+
Sbjct: 509 DAWWDSEIKDLLPANCKFEPQNLEKVMDILDVWFDSGSTWAAVLKSGDYDAGSYPADMYL 568
Query: 773 EGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGA 832
EG DQ GWF SSLL S A + AP+R+V HGF VDE G KMSKS GNV++ ++ +
Sbjct: 569 EGSDQHRGWFQSSLLLSCAAQGRAPYRSVLTHGFTVDENGQKMSKSKGNVVAPANVAK-- 626
Query: 833 KKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQD 892
YGV++LR WVA + + I +NIL +
Sbjct: 627 ---------------------------TYGVEILRLWVAL-SDYSSDLKISENILKQVSE 658
Query: 893 DVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRV 952
+KIR+++R+LL +++ + S +D ++L R + + + + + +++ +
Sbjct: 659 QYRKIRNTIRFLLANVNDLEDIETSNFNILDRWILSRAKKTFDETEAAFRNYDFSKGFSL 718
Query: 953 LLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV 1012
L+NF+ +LS Y + KDRLYCD+ + +AR S + I VLL +AP + + +E
Sbjct: 719 LMNFLSADLSGIYLDICKDRLYCDARDSDARRSAQSAMALITRVLLPLIAPTLTYTVDEA 778
Query: 1013 YSHLPS--RQGTFSSF 1026
+ P + G+ +F
Sbjct: 779 MDYAPGIIKNGSADAF 794
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 224/399 (56%), Gaps = 28/399 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA---I 77
F LHDGPPYANG HIGHA+NK LKDI L+++ G+ + + PGWDCHGLPIE + +
Sbjct: 52 FTLHDGPPYANGNIHIGHALNKTLKDIILKTHYFFGENIRFTPGWDCHGLPIEQQVEVKL 111
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH---NCYHTFDKEYVKNQL 134
K K LS IR+ + A E I+ QK F+ GV +DW+ F+ E K L
Sbjct: 112 GDKKKSLSKTQIRELCREHAREFIDVQKESFKQLGVASDWDDPYLTMKFKFEAEIYKT-L 170
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
C+ + K+ + KPVYWS ++R+ALAE+E+EY+ D SIY+ KL + A +
Sbjct: 171 CK---VAKRGLLIERSKPVYWSWAARSALAEAEVEYE-DKEDYSIYVAFKLGEEAAAKI- 225
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIE 254
GA D A+IWTTTPW+LPANQ I+ +P+ Y + S N+I AK ++ L+ T E
Sbjct: 226 GAKDARAVIWTTTPWTLPANQAISLSPSEIYVLTS---ENLIFAKEMLGELEKEGLTKGE 282
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
++ +F L+++ ++P+N R + V+ GTGLVH AP HG+DD+ ++L
Sbjct: 283 ILKEFAATELENLHAVNPLN--GRKSLFILGDHVTMDGGTGLVHTAPGHGEDDYHVSLKY 340
Query: 315 KIPVLNLITNQGKYSPDAGPG----------LEGLNILGDGKDQVLHLVEPDVLWTENYQ 364
I V+ + G Y L G++I +++L L+ ++L +
Sbjct: 341 GIEVIMPVDEGGLYDETLKAKKLFPSGVVDELIGMHIF-KANEKILELLGSNLLKVSKFV 399
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVG 403
HSYP+ WRT KPVI +A++QWFI + K E + V
Sbjct: 400 HSYPFCWRTHKPVIYRATKQWFIAMDEPKIEGKTLREVA 438
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 1123 LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 1182
L G++I + +++L L+ ++L + HSYP+ WRT KPVI +A++QWFI + K E
Sbjct: 372 LIGMHIF-KANEKILELLGSNLLKVSKFVHSYPFCWRTHKPVIYRATKQWFIAMDEPKIE 430
Query: 1183 -------ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--I 1233
AL LE V F P S K + I RP WCISRQR WGVPI F DT I
Sbjct: 431 GKTLREVALKELENVKFYPASGVKRIGSMIENRPDWCISRQRDWGVPIAFFRRKDTKEPI 490
Query: 1234 VNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
++ + + + ++ G D WW ++ LL
Sbjct: 491 FDDEILDNVAAIFEQKGADAWWDSEIKDLL 520
>gi|403069262|ref|ZP_10910594.1| isoleucyl-tRNA synthetase [Oceanobacillus sp. Ndiop]
Length = 918
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 326/620 (52%), Gaps = 60/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ ++ LL+G + +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFEVTD-GKDLLDGGEKI--IIWTTTPWTIPANLGISLH 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P LEY VA G +VA+ L+ E L W + V F G+ + HP
Sbjct: 248 PQLEYVVAEANGEKFVVAQALLDTVTEELGWEA---VKVTKTFKGKEADRVVAKHPFY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD ++ V++ GTG VH AP HG+DDF ++ I + ++G ++ +A PG
Sbjct: 303 DRDSLVMLGDHVTTDAGTGCVHTAPGHGEDDFYVSKRYGIDAFCPVDDKGVFTEEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L ++ HSYP+DWRTKKP I +A+ QWF + + +
Sbjct: 362 EGLFYDSANKVVTEKLEEVGALLKMSFITHSYPHDWRTKKPTIFRATAQWFASIKDFRQD 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L +++VN+ P+ + L + + R WCISRQR WGVPIPVFY D T I+ + ++H
Sbjct: 422 ILDEIKQVNWYPKWGETRLHNMVRDREDWCISRQRAWGVPIPVFYGEDGTPIITDETVEH 481
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L EHG + W+ +LL + N TK DI+D+WFDSG S VL ++
Sbjct: 482 VSNLFSEHGSNIWFEKEAAELLPEGFSSEHSPNGVFTKETDIMDVWFDSGSSHEGVLMNR 541
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL T+VA+ AP+ + HGFV+D G KMSKS+GN
Sbjct: 542 EDHRRPADIYLEGSDQYRGWFNSSLSTAVAVTGKAPYETIISHGFVLDGNGRKMSKSLGN 601
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+LR WVA+ V
Sbjct: 602 VIVPSKVQK-----------------------------QLGADILRLWVAS-VDYQADVR 631
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I +IL + + +KIR++ R+LL L + + +T ++ VD YML RL + + +
Sbjct: 632 ISDDILKQTSEAYRKIRNTFRFLLANLADFNPATDKVADEKLEEVDRYMLHRLQQLVSDI 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y +++Y++ + NF +LS+FY KD LY ++ + + R S + I L
Sbjct: 692 RSNYEKYEYSQTFHQIHNFCAVDLSSFYLDFAKDVLYIEAADNKRRRSIQTGYYEILTTL 751
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
++ + PI+PH +EV+ ++P
Sbjct: 752 VKLLTPIIPHTMDEVWEYIP 771
Score = 286 bits (732), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 228/401 (56%), Gaps = 19/401 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y E G+P FILHDGPPYANG HIGHA+NKILKD +R + G YVPG
Sbjct: 34 ANMYEKSLERTKGRPLFILHDGPPYANGDLHIGHALNKILKDFIVRYKSMTGFHAPYVPG 93
Query: 65 WDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE K K K +S + RK +AL +++Q+++F G+ ADW+ N
Sbjct: 94 WDTHGLPIETALTKNKKVKRKEMSVAEFRKLCAEYALGQVDSQRSQFRQLGIRADWD-NP 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T K+Y Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 153 YITLTKDYEAAQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSASIYV 211
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
++ LL+G + +IWTTTPW++PAN I+ +P LEY VA G +VA+ L
Sbjct: 212 AFEVTD-GKDLLDGGEKI--IIWTTTPWTIPANLGISLHPQLEYVVAEANGEKFVVAQAL 268
Query: 242 V----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ E L W ++V F G+ + HP RD ++ V++ GTG V
Sbjct: 269 LDTVTEELGWEA---VKVTKTFKGKEADRVVAKHPFY--DRDSLVMLGDHVTTDAGTGCV 323
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H AP HG+DDF ++ I + ++G ++ +A PG EGL K L E
Sbjct: 324 HTAPGHGEDDFYVSKRYGIDAFCPVDDKGVFTEEA-PGFEGLFYDSANKVVTEKLEEVGA 382
Query: 358 LWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L ++ HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 383 LLKMSFITHSYPHDWRTKKPTIFRATAQWFASIKDFRQDIL 423
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EGL K L E L ++ HSYP+DWRTKKP I +
Sbjct: 348 VDDKGVFTEEA-PGFEGLFYDSANKVVTEKLEEVGALLKMSFITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ VN+ P+ + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKDFRQDILDEIKQVNWYPKWGETRLHNMVRDREDWCISRQRAWGVPIPVFY 466
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ + ++H L EHG + W+ +LL
Sbjct: 467 GEDGTPIITDETVEHVSNLFSEHGSNIWFEKEAAELL 503
>gi|126649711|ref|ZP_01721947.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
gi|126593430|gb|EAZ87375.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
Length = 921
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 223/620 (35%), Positives = 328/620 (52%), Gaps = 63/620 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
+ALAE+E+EYK D S SIY+ + VPA D +IWTTTPW+LPAN
Sbjct: 191 SALAEAEIEYK-DIKSPSIYVSFAIKDAKGVVPA-------DAKFVIWTTTPWTLPANLG 242
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
I+ NP Y V +V I+AK L+E + + + +VV + G+ L I HP
Sbjct: 243 ISLNPEFVYVVVAVANKKFIIAKDLLETVATALEWEAYEVVQEVKGEVLDRIVAQHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RD ++ V++ GTG VH AP HG+DD+ ++ + +L+ + N G Y+ D PG
Sbjct: 302 -DRDSLVMVGEHVTADAGTGCVHTAPGHGEDDYHISKQYGLDILSPLDNSGCYT-DEAPG 359
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ K L E D L + + HSYP+DWRTKKPVI +A+ QWF E +
Sbjct: 360 FEGVFYNDANKLVTEKLKEVDALESLGFISHSYPHDWRTKKPVIYRATPQWFASVEAFRG 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E L ++ F P + L + I R W ISRQR WGVPIP+FY +G+ II E I
Sbjct: 420 ELLEAVKATAFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIPIFYAENGEPIITPE-TI 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + ++LL + N TK NDI+D+WFDSG S VL
Sbjct: 479 SHISALFREHGSNIWFQKTAKELLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSHQGVLV 538
Query: 765 DK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + HGFV+D +G KMSKS+G
Sbjct: 539 ERGMKYPADLYLEGSDQHRGWFNSSLITSVAINGLAPYKGLLTHGFVLDGEGRKMSKSLG 598
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI +P K + YG D+LR WVA+ V
Sbjct: 599 NVI-----------IPQ------------------KVMDQYGADILRLWVAS-VDYTADV 628
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
I ++L + +KIR++ R+L G + + + ++ R +D Y+ RL + T
Sbjct: 629 RISMDMLKQVSEVYRKIRNTFRFLHGNITDFDPTKDRVAYAELREMDQYVYMRLQDVLKT 688
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y + +A V+ NFV ELS+FY + KD +Y + + + R + +++
Sbjct: 689 VRAAYNRYDFAAVYHVVNNFVAVELSSFYLDIAKDVVYIEGSDNKDRRAMQTVIYDTLMT 748
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH +E++S+L
Sbjct: 749 LVKIMTPIIPHTTDEMWSYL 768
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 231/396 (58%), Gaps = 22/396 (5%)
Query: 11 QREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
Q E G+PE++LHDGPPYANG HIGHA+NK+LKD+ R + G V+Y+PGWD HGL
Sbjct: 40 QMERTEGRPEYVLHDGPPYANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGL 99
Query: 71 PIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
PIE +A+T+K K +S R+ + +A E I+ Q+ +F G+ +WE N Y T
Sbjct: 100 PIE-QALTNKGVKRKEMSVAAFRQLCEEYAYEQIDNQRNQFRRLGIRGNWE-NPYITLKP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F + ++ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+ +
Sbjct: 158 EFEARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEYK-DIKSPSIYVSFAIKD 216
Query: 188 ----VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
VPA D +IWTTTPW+LPAN I+ NP Y V +V I+AK L+E
Sbjct: 217 AKGVVPA-------DAKFVIWTTTPWTLPANLGISLNPEFVYVVVAVANKKFIIAKDLLE 269
Query: 244 SLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ + + EVV + G+ L I HP RD ++ V++ GTG VH AP
Sbjct: 270 TVATALEWEAYEVVQEVKGEVLDRIVAQHPFY--DRDSLVMVGEHVTADAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DD+ ++ + +L+ + N G Y+ D PG EG+ K L E D L +
Sbjct: 328 HGEDDYHISKQYGLDILSPLDNSGCYT-DEAPGFEGVFYNDANKLVTEKLKEVDALESLG 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF E + E L
Sbjct: 387 FISHSYPHDWRTKKPVIYRATPQWFASVEAFRGELL 422
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
L+ + N G Y+ D PG EG+ K L E D L + + HSYP+DWRTKKPV
Sbjct: 344 LSPLDNSGCYT-DEAPGFEGVFYNDANKLVTEKLKEVDALESLGFISHSYPHDWRTKKPV 402
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF E + E L ++ F P + L + I R W ISRQR WGVPIP
Sbjct: 403 IYRATPQWFASVEAFRGELLEAVKATAFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIP 462
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY +G+ II E I H L EHG + W+ ++LL
Sbjct: 463 IFYAENGEPIITPE-TISHISALFREHGSNIWFQKTAKELL 502
>gi|452989592|gb|EME89347.1| hypothetical protein MYCFIDRAFT_125245 [Pseudocercospora fijiensis
CIRAD86]
Length = 1053
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 344/645 (53%), Gaps = 53/645 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
TALAE+ELEY H + ++K+ ++P L + + ALIWTTTPW+LPAN+
Sbjct: 241 TALAEAELEYDDSHTCTAAFVKMPFVKLPNVLKANPSIRPDTISALIWTTTPWTLPANKA 300
Query: 474 IAFNPALEYSVASVKGAN--------VIVAKCLVENLKWTFQ--TDIDVVCD-FPGQYLQ 522
IA +EYSV S+ + ++VAK +E++ T ++VV D G L
Sbjct: 301 IAVGSDIEYSVISIADESNLAAGQDQLLVAKERIEHVLSHLPEGTRLEVVIDAISGHELG 360
Query: 523 DITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI-PVLNLITN 581
Y + E L A FV+++ GTG+VH AP HG DD+ + A+ + P + +
Sbjct: 361 GCCYNIFQDSES---PLFEAPFVTATSGTGVVHIAPGHGIDDWQVCQAQGVGPAFAPVDD 417
Query: 582 QGKYSPDA-------GPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKK 632
+G+Y+ DA P GL+ G VL ++ P +L + H P DWRTK+
Sbjct: 418 EGRYTVDAFPRTVDSAPPFHGLDAQTQGVTAVLDVLRRSPLLLIAHKFTHKNPIDWRTKQ 477
Query: 633 PVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVP 692
PVI +A+ QWF D +K ALA LE V+F+PES K L IA R WCISRQR WGVP
Sbjct: 478 PVITRATAQWFADISAVKDRALAALESVHFIPESGKSRLESFIAGRSQWCISRQRAWGVP 537
Query: 693 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQ--LLNTSDVNSNVTKSNDI 748
IP Y DT +++ +I H ++I+E G D W+S + + L+ + + +D
Sbjct: 538 IPALYHVDTGEACISDESIHHIISVIEERGVDAWFSDAKAEPAWLHPTLEPGKWIRGSDT 597
Query: 749 LDIWFDSGISWSHVLKDKP----AHVYMEGMDQINGWFMSSLLTSVAL-----KHTAPFR 799
+D+WFDSG SW+ + + ++VY EG DQ GWF SSLLT++A K APF+
Sbjct: 598 MDVWFDSGTSWTSLERRTDGLPRSNVYSEGTDQHRGWFQSSLLTAIAAQSADEKPVAPFK 657
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+ HGF +D G KMSKS+GNV+S +I G ++ T+ K +
Sbjct: 658 TLTTHGFTLDGYGRKMSKSIGNVVSPDEIISGVLVQSTKGRTKAGKHKQAPPTKAQKGI- 716
Query: 860 AYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG-- 916
G DVLR WVA+ +KD V I + +L S Q +QK R + R+L+GVLHN+ ++
Sbjct: 717 -LGPDVLRLWVASSDYTKD--VAISQPVLQSVQQSLQKYRVTFRFLVGVLHNYPDAKPRH 773
Query: 917 ---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
S + D +L++L T+ + Y ++++ + F+ ++LSAFYF ++KDRL
Sbjct: 774 DLLSELDFADRVILQQLSVCSRTVFSAYSDYKFYACITEINRFINSDLSAFYFEIIKDRL 833
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
Y S R L I L R + P+ PHL EEV+ +P+
Sbjct: 834 YTGST--AIRRHTQTILMVILQELCRMLGPVTPHLIEEVWEWMPA 876
Score = 299 bits (765), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 244/442 (55%), Gaps = 52/442 (11%)
Query: 6 ELYSWQRE-------ALNGKP---EFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQ 55
+LY+WQR+ +G EF+LHDGPPYANG H+GHA+NKILKD+ LRS L +
Sbjct: 64 DLYAWQRQHRPATIVDRDGNEKCNEFVLHDGPPYANGAVHVGHALNKILKDLMLRSELSR 123
Query: 56 GKRVHYVPGWDCHGLPIELKAI-------------TSKDKLLSPLDIRKKAKNFALETIN 102
G+RV Y PGWDCHGLPIELKA+ T+ + +S DIR A+ A ETI
Sbjct: 124 GRRVQYTPGWDCHGLPIELKALQQPKAPRQEAKVATALSQQMSAADIRAAARKLATETIE 183
Query: 103 TQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTA 162
QK F WGV+ +W+ Y T DK + QL F ++ ++ I R +PVYWSPSSRTA
Sbjct: 184 LQKKSFREWGVMGEWDRP-YRTMDKTFELRQLDVFGDMVRKGLISRHHRPVYWSPSSRTA 242
Query: 163 LAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQFIA 218
LAE+ELEY H + ++K+ ++P L + + ALIWTTTPW+LPAN+ IA
Sbjct: 243 LAEAELEYDDSHTCTAAFVKMPFVKLPNVLKANPSIRPDTISALIWTTTPWTLPANKAIA 302
Query: 219 FNPALEYSVASVKGAN--------VIVAKCLVESLKWTFQ--TDIEVVCD-FPGQYLQDI 267
+EYSV S+ + ++VAK +E + T +EVV D G L
Sbjct: 303 VGSDIEYSVISIADESNLAAGQDQLLVAKERIEHVLSHLPEGTRLEVVIDAISGHELGGC 362
Query: 268 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI-PVLNLITNQG 326
Y + E L A FV+++ GTG+VH AP HG DD+ + A+ + P + ++G
Sbjct: 363 CYNIFQDSES---PLFEAPFVTATSGTGVVHIAPGHGIDDWQVCQAQGVGPAFAPVDDEG 419
Query: 327 KYSPDA-------GPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPV 377
+Y+ DA P GL+ G VL ++ P +L + H P DWRTK+PV
Sbjct: 420 RYTVDAFPRTVDSAPPFHGLDAQTQGVTAVLDVLRRSPLLLIAHKFTHKNPIDWRTKQPV 479
Query: 378 ILKASQQWFIDTERIKPEALVC 399
I +A+ QWF D +K AL
Sbjct: 480 ITRATAQWFADISAVKDRALAA 501
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 11/159 (6%)
Query: 1109 ITNQGKYSPDA-------GPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWR 1159
+ ++G+Y+ DA P GL+ +G VL ++ P +L + H P DWR
Sbjct: 415 VDDEGRYTVDAFPRTVDSAPPFHGLDAQTQGVTAVLDVLRRSPLLLIAHKFTHKNPIDWR 474
Query: 1160 TKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVW 1219
TK+PVI +A+ QWF D +K ALA LE V+F+PES K L IA R WCISRQR W
Sbjct: 475 TKQPVITRATAQWFADISAVKDRALAALESVHFIPESGKSRLESFIAGRSQWCISRQRAW 534
Query: 1220 GVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
GVPIP Y DT +++ +I H ++I+E G D W+S
Sbjct: 535 GVPIPALYHVDTGEACISDESIHHIISVIEERGVDAWFS 573
>gi|365159327|ref|ZP_09355508.1| isoleucyl-tRNA synthetase 1 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363625325|gb|EHL76366.1| isoleucyl-tRNA synthetase 1 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 921
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 222/619 (35%), Positives = 323/619 (52%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYS+ V I+A L E + T + + +V+ G L+ HP RD
Sbjct: 247 PELEYSIVKVNDEKYIIASELFETVAKTLEWENAEVMKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ E +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I H
Sbjct: 424 AVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TINHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L E+G + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFRENGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + S +++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N E R + L+++ L +
Sbjct: 693 AYETYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V PI+PH A+EV+ ++P
Sbjct: 753 LVTPILPHTADEVWPYIPG 771
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEYS+ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKYIIWTTTPWTLPANLGISVHPELEYSIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EV+ G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVMKTVKGSELEYTVAKHPFY--DRDSLVMLGDHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E +
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELI 422
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E + + +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELIEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L E+G + W+ + LL
Sbjct: 475 DE-TINHVADLFRENGSNVWFEREAKDLL 502
>gi|422810097|ref|ZP_16858508.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
gi|378751761|gb|EHY62349.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
Length = 921
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 222/618 (35%), Positives = 323/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDSVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP+ K + G D++R WVA+ V +
Sbjct: 602 L-----------LPS------------------KVIKQLGADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNTVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 222/400 (55%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+ +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ + Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVEGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDSVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|404414097|ref|YP_006699684.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
gi|404239796|emb|CBY61197.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
Length = 921
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 225/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|410667639|ref|YP_006920010.1| isoleucyl-tRNA synthetase IleS [Thermacetogenium phaeum DSM 12270]
gi|409105386|gb|AFV11511.1| isoleucyl-tRNA synthetase IleS [Thermacetogenium phaeum DSM 12270]
Length = 935
Score = 359 bits (921), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 219/619 (35%), Positives = 328/619 (52%), Gaps = 53/619 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY+ D S SIY+ + L+ + LIWTTTPW++P NQ I+ +
Sbjct: 193 TALAEAEVEYQEDE-SDSIYVLFPIRD-GKELINVDEKTYVLIWTTTPWTIPGNQAISLH 250
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y +A V G VIVA+ L+ + + +T ++ + G+ L+ I HP RD
Sbjct: 251 PDYRYVLAEVDGRRVIVAEELLRQVAEIKGETHPPILGAWQGRELEGIRCAHPFY--DRD 308
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L+ V+ +GTG VH APAHG +DF + IPVL+L+ G+Y P+AG G
Sbjct: 309 SLLILGEHVTLEQGTGAVHTAPAHGTEDFEVCQKYGIPVLSLVDGSGRYLPEAGI-FAGE 367
Query: 597 NILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
I + + L +L+ ++ H YP+ WR K+P++ +A++QWF + + EAL
Sbjct: 368 VIWESNQKVIAELERRGLLYHKSKIVHQYPHCWRCKEPLMFRATEQWFASIDGFRKEALK 427
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+E V ++P ++ +R +A+R WCISRQRVWGVPIP+FY D I+N+ I
Sbjct: 428 AIEGVRWIPAWGEERIRSMVAERGDWCISRQRVWGVPIPIFYCEDCQATIINDETIGWLQ 487
Query: 714 TLIDEHGPDFWWSLSVEQLLNT-----SDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L EHG D W+ S LL S +N K D +D+WFDSG S VL+ +P
Sbjct: 488 KLFAEHGSDVWFERSAYDLLPAGFKCPSCGRANFRKETDTMDVWFDSGSSHMAVLEQRPE 547
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL TSVA++ AP++ V HGFVVDE+G KMSKS+GNVI
Sbjct: 548 LKWPADLYLEGSDQHRGWFNSSLCTSVAVRGVAPYKAVLTHGFVVDEEGRKMSKSLGNVI 607
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
D+ + YG DVLR WV + ++ + +
Sbjct: 608 YPQDL-----------------------------INKYGADVLRLWVTSADYRN-DMAVS 637
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
NI+ + +KIR++ R+LLG L++ S+ +D ++L RL + +
Sbjct: 638 LNIMKQLAEAYRKIRNTFRFLLGNLYDFDPEKDSLPYEQLSLLDKWILFRLHQLIQRVTR 697
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + ++ + F V ++S+FY + KD LYC + R L+ +VL+R
Sbjct: 698 AYEDSEFHIVYHAISTFCVVDMSSFYLDITKDILYCGAAESRERRGIQTVLYEAANVLVR 757
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
+AP++ AEE++S LP
Sbjct: 758 LLAPVLCFTAEEIWSFLPG 776
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 226/396 (57%), Gaps = 11/396 (2%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY +E GKP++ILHDGPPYANG H+GH +NK LKDI ++ + G YVPGWD
Sbjct: 37 LYKRIQEQSKGKPKYILHDGPPYANGNIHLGHTLNKTLKDIVVKYKTMAGYDAPYVPGWD 96
Query: 67 CHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +AI + ++P + R+ + +AL+ ++ Q+ EF+ GV DW+H Y
Sbjct: 97 THGLPIEQQAIKTLGVDRHRVAPAEFRRICREYALKYVDIQREEFKRLGVQGDWDHP-YL 155
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T Y Q+ F + K+ YIY+ +KPVYW TALAE+E+EY+ D S SIY+
Sbjct: 156 TLHPTYEAVQIGIFGEMAKRGYIYKGMKPVYWCTDCETALAEAEVEYQEDE-SDSIYVLF 214
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L+ + LIWTTTPW++P NQ I+ +P Y +A V G VIVA+ L+
Sbjct: 215 PIRD-GKELINVDEKTYVLIWTTTPWTIPGNQAISLHPDYRYVLAEVDGRRVIVAEELLR 273
Query: 244 SL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ + +T ++ + G+ L+ I HP RD L+ V+ +GTG VH APA
Sbjct: 274 QVAEIKGETHPPILGAWQGRELEGIRCAHPFY--DRDSLLILGEHVTLEQGTGAVHTAPA 331
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG +DF + IPVL+L+ G+Y P+AG G I + + L +L+ ++
Sbjct: 332 HGTEDFEVCQKYGIPVLSLVDGSGRYLPEAGI-FAGEVIWESNQKVIAELERRGLLYHKS 390
Query: 363 -YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
H YP+ WR K+P++ +A++QWF + + EAL
Sbjct: 391 KIVHQYPHCWRCKEPLMFRATEQWFASIDGFRKEAL 426
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 6/175 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQ--HSYPYDWRTKKP 1163
L+L+ G+Y P+AG + ++ E +V+ +E L + H YP+ WR K+P
Sbjct: 348 LSLVDGSGRYLPEAG--IFAGEVIWESNQKVIAELERRGLLYHKSKIVHQYPHCWRCKEP 405
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
++ +A++QWF + + EAL +EGV ++P ++ +R +A+R WCISRQRVWGVPI
Sbjct: 406 LMFRATEQWFASIDGFRKEALKAIEGVRWIPAWGEERIRSMVAERGDWCISRQRVWGVPI 465
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSN 1276
P+FY D I+N+ I L EHG D W+ LL + ++N
Sbjct: 466 PIFYCEDCQATIINDETIGWLQKLFAEHGSDVWFERSAYDLLPAGFKCPSCGRAN 520
>gi|423483486|ref|ZP_17460176.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6X1-2]
gi|401141037|gb|EJQ48592.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6X1-2]
Length = 921
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 224/641 (34%), Positives = 329/641 (51%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + ++LEG D +IWTTTPW+LPAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKKSASIYVAFPVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY++ V I+A L E + T + + +VV G L+ HP RD
Sbjct: 247 PELEYAIVKVNDEKYIIASELFETVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 364 FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQ 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EE +VP + L + + R WCISRQR WGVPIPVFY +GD II +E I +
Sbjct: 424 AVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDE-TISNVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + N K DI+D+WFDSG S VL+++
Sbjct: 483 DLFREHGSNVWFEREAKDLLPEGFTHPGSPNGEFRKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGFV+D G KMSKS+GN++
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 603 VPKKI-----------------------------MDQLGGDILRLWVSS-VDYQSDVRIS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + ++ R VD YML +L + +
Sbjct: 633 DDILKQVAEVYRKIRNTFRFLLGNLDDFNPGENKVAAAELREVDRYMLVKLNDLITKVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y + +A + NF +LS+FY KD LY + N + R + L+++ L +
Sbjct: 693 AYEAYDFAAVYHAIHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
V PI+PH A+EV+ ++P + + ++ G+ A
Sbjct: 753 LVTPILPHTADEVWPYVPGAEEESVQLTNMPEVVEVDGAEA 793
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 230/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK +A E + Q+ +F+ GV ADW+ N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCAEYAYEQVERQREQFKRLGVRADWD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + Y Q+ F ++ K+ YIY+ KPVYWSP+S +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEIEYQ-DKKSASIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ ++LEG D +IWTTTPW+LPAN I+ +P LEY++ V I+A L E
Sbjct: 213 PVKD-GKNVLEG--DEKFIIWTTTPWTLPANLGISVHPELEYAIVKVNDEKYIIASELFE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ T + + EVV G L+ HP RD ++ V++ GTG VH AP
Sbjct: 270 TVAKTLEWENAEVVKTVKGSELEYTVAKHPFY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ + VL + ++G + +A PG EGL K L E L
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEA-PGFEGLFYDKANKPITEKLEEVGALLKLT 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF E + E L
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
+ PG EGL K L E L + HSYP+DWRTKKP+I +A+ QWF
Sbjct: 355 NEAPGFEGLFYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPIIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
E + E L +E +VP + L + + R WCISRQR WGVPIPVFY +GD II
Sbjct: 415 EAFRKELLQAVEETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGDPIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I + L EHG + W+ + LL
Sbjct: 475 DE-TISNVADLFREHGSNVWFEREAKDLL 502
>gi|422413560|ref|ZP_16490519.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
gi|313618002|gb|EFR90151.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
Length = 921
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T +S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNGVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 223/400 (55%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+ +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRKTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|47096662|ref|ZP_00234249.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|254912578|ref|ZP_05262590.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|254936904|ref|ZP_05268601.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|386047671|ref|YP_005966003.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
gi|47014984|gb|EAL05930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 1/2a str.
F6854]
gi|258609502|gb|EEW22110.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|293590567|gb|EFF98901.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|345534662|gb|AEO04103.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
Length = 921
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 225/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|16801193|ref|NP_471461.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
gi|81526006|sp|Q929Z6.1|SYI_LISIN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|16414641|emb|CAC97357.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
Length = 921
Score = 358 bits (920), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T +S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNGVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 223/400 (55%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+ +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|302927557|ref|XP_003054522.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735463|gb|EEU48809.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 950
Score = 358 bits (920), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 227/622 (36%), Positives = 327/622 (52%), Gaps = 45/622 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DHISK+ Y++ + + VP L + L+A IWTTTPW+LPAN+
Sbjct: 190 TALAEAELEYRDDHISKAAYVRFPIVSDWSSVP-ELGKFKGKLYAAIWTTTPWTLPANRA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
I+ + L YSV V ++A VE ++ VV G L+ + Y + + +
Sbjct: 249 ISVHNDLTYSVIQVGSDGYLIATDRVEAMRQIMPPFEIVVDSIRGSDLKGLEYHNKLRGQ 308
Query: 534 QRDLKLL-PAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L+ A FV++ GTGLVH AP HGQ+D+ I I + G ++ +A P
Sbjct: 309 SSASQLIIDADFVTADSGTGLVHSAPGHGQEDYEACAKFGIEAFAPIDDSGHFTKEAYPD 368
Query: 593 -----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
+IL G VL L+ DVL T +H YPYDWRTK+PV+++A+ QWF D
Sbjct: 369 DPEKLTSAPSILDGGSQSVLDLMGDDVLDTHKLRHKYPYDWRTKRPVVIRATAQWFADVG 428
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVN 705
IK +ALA L +V FVPE + L + R WCISRQR WGVPIP YD G+ ++
Sbjct: 429 SIKEDALAALRDVRFVPEGGRVRLESFVKGRSEWCISRQRSWGVPIPALYDESGNAVMTT 488
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
E I+H +++ E W+S S + + + D +D+WFDSG SW+
Sbjct: 489 E-TIEHIISVMQERTSSAWFSDSPDDPAWVPPTLTGKYRRGTDTMDVWFDSGSSWTET-- 545
Query: 765 DKPAHVYMEGMDQINGWFMSSLLTSVA--------LKHTAPFRNVFLHGFVVDEKGAKMS 816
+ PA VY+EG DQ GWF SSLLT VA K +PF+ + HGF +D +G KMS
Sbjct: 546 EGPADVYLEGSDQHRGWFQSSLLTYVASHKSTDNTSKIVSPFKTLVTHGFTLDGQGKKMS 605
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN+I + G+ P + A +G ++ G D +R W AA A
Sbjct: 606 KSLGNMIVPDQVMDGSLLGP---------VKAKGKGKGGQRFDGLGPDAVRLW-AASADF 655
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNT 936
V IG+ IL + K R+ ++ LLG L+ E+ S +D L +L + +
Sbjct: 656 TTDVLIGQTILQPIHTSLIKYRTIIKMLLGSLNQ--EARQSQLTKLDQIALVQLSDTMSQ 713
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ + +++ RA+ ++ +V +LSAFY +KDRLYC G L +F
Sbjct: 714 VMESFDNYEFHRATGLINRWVATDLSAFYLEALKDRLYCGDGGG--------ILEPVFIG 765
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
LR +API P L EE +SH P+
Sbjct: 766 FLRMLAPITPLLVEEAWSHRPA 787
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/406 (42%), Positives = 246/406 (60%), Gaps = 15/406 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ + + F+LHDGPPYANG H+GHA+NKILKD+ +R + QG+RV Y PGW
Sbjct: 35 DLYVWQAQNRPDEKPFVLHDGPPYANGNLHVGHALNKILKDMIVRVKVQQGRRVEYRPGW 94
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE+KA+ +S K L+P+ IR A+ A +T+ Q F + GV++DWE + T
Sbjct: 95 DCHGLPIEMKALGSSATKGLTPVQIRDTARRLASKTVKEQMKGFRALGVMSDWEKK-WTT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D+E+ QL F NL ++ IYR KPV+WS SS+TALAE+ELEY+ DH+SK+ Y++
Sbjct: 154 MDREFEIRQLRVFQNLVRRGLIYRKHKPVFWSASSQTALAEAELEYRDDHISKAAYVRFP 213
Query: 185 L----NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ + VP L + L+A IWTTTPW+LPAN+ I+ + L YSV V ++A
Sbjct: 214 IVSDWSSVP-ELGKFKGKLYAAIWTTTPWTLPANRAISVHNDLTYSVIQVGSDGYLIATD 272
Query: 241 LVESLKWTFQTDIEVVCD-FPGQYLQDITYIHPINKEQRDLKL-LPAGFVSSSKGTGLVH 298
VE+++ E+V D G L+ + Y + + + +L + A FV++ GTGLVH
Sbjct: 273 RVEAMR-QIMPPFEIVVDSIRGSDLKGLEYHNKLRGQSSASQLIIDADFVTADSGTGLVH 331
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLV 353
AP HGQ+D+ I I + G ++ +A P +IL G VL L+
Sbjct: 332 SAPGHGQEDYEACAKFGIEAFAPIDDSGHFTKEAYPDDPEKLTSAPSILDGGSQSVLDLM 391
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
DVL T +H YPYDWRTK+PV+++A+ QWF D IK +AL
Sbjct: 392 GDDVLDTHKLRHKYPYDWRTKRPVVIRATAQWFADVGSIKEDALAA 437
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 8/155 (5%)
Query: 1109 ITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
I + G ++ +A P +IL G VL L+ DVL T +H YPYDWRTK+P
Sbjct: 355 IDDSGHFTKEAYPDDPEKLTSAPSILDGGSQSVLDLMGDDVLDTHKLRHKYPYDWRTKRP 414
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+++A+ QWF D IK +ALA L V FVPE + L + R WCISRQR WGVPI
Sbjct: 415 VVIRATAQWFADVGSIKEDALAALRDVRFVPEGGRVRLESFVKGRSEWCISRQRSWGVPI 474
Query: 1224 PVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
P YD G+ ++ E I+H +++ E W+S
Sbjct: 475 PALYDESGNAVMTTE-TIEHIISVMQERTSSAWFS 508
>gi|330718662|ref|ZP_08313262.1| isoleucyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
Length = 930
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 229/634 (36%), Positives = 340/634 (53%), Gaps = 64/634 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S++ ++ +L+ T L ++WTTTP+++ A++ I
Sbjct: 191 SALAEAEIEYH-DIESTSLFYANRVKDGKG-ILDNNTYL--IVWTTTPFTITASRGITLG 246
Query: 478 PALEYSVASVKGAN-----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
P EY+V V+ AN V+ A L E+ + D +VV G+ L IT HP ++
Sbjct: 247 PDFEYAV--VQPANDDRKFVVAAGLLAESAERFGWNDYEVVATHLGKELDRITAQHPWDQ 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ A V+ GTGLVH AP G+DD+ + A +P + +G + +AGP
Sbjct: 305 NVEEL-VMNADHVTLDSGTGLVHTAPGFGEDDYNVGKAYGLPADVTVDAKGFMTSEAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
LEG D D V+ ++ LW TE HSYP+DWRTKKP+I +A QWF ++ +
Sbjct: 364 LEG-KFYDDVVDIVIDKLKRANLWMATEKITHSYPFDWRTKKPIIWRAVPQWFASVDQFR 422
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
+ L +++VNF PE KK L + I R W ISRQRVWGVP+P+FY D T I++ I
Sbjct: 423 QDILDQIDQVNFYPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIFYAEDGTAILDRDII 482
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L ++HG ++W+ S ++LL N N TK DI+D+WFDSG SW+ VL
Sbjct: 483 EHIAQLFEKHGSNYWFEHSAQELLPEGYTNEHSPNGEFTKEEDIMDVWFDSGSSWNGVLN 542
Query: 765 -----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
D PA VY+EG DQ GWF SSL+TSVA+ AP++NV GF +D+ G KMSKS+
Sbjct: 543 TRSELDYPADVYLEGSDQYRGWFNSSLITSVAVNGVAPYKNVISQGFTMDQNGNKMSKSL 602
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW-VAAHASKDP 878
GN IS ++ A K+ G+++LR W V S D
Sbjct: 603 GNTISPLEV--------------------------ADKM---GIEILRLWTVTVDTSAD- 632
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV-----YMLKRLCEF 933
+P+ +IL + +KIR++LR+LL + + T S++ Y D+ Y L E
Sbjct: 633 -MPVSNDILKQVSESYRKIRNTLRFLLANTTDFNPETDSVA-YDDLAAHDQYFYTLLNEL 690
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y +Q+ L+NF+ +LSAFY + KD +Y ++ G R S +
Sbjct: 691 VKDVRQAYDTYQFKAVFNRLINFINVDLSAFYLDIAKDVVYVEAPTGHVRRSMQTVFYKT 750
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFC 1027
L++ + PI+PH AEEV+ +LP F+
Sbjct: 751 LLDLVKLLLPILPHTAEEVWEYLPHENEAFAYLA 784
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/389 (40%), Positives = 221/389 (56%), Gaps = 18/389 (4%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE--LK 75
KP F LHDGPPYANG H+GHA+NKI KDI +R + G YVPGWD HGLPIE L
Sbjct: 47 KPHFNLHDGPPYANGNIHLGHALNKISKDIIVRYKNMTGFYAPYVPGWDTHGLPIEQQLT 106
Query: 76 AITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
K + R A++FALE + Q+ +F+ GVLADW+ Y T E+ Q+
Sbjct: 107 KAGHDRKSMPKYAWRNLARDFALEQVKKQRQDFKRLGVLADWD-KPYITLQPEFEAAQIR 165
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG 195
F ++ + YI++ KPVYWS SS +ALAE+E+EY D S S++ ++ +L+
Sbjct: 166 VFGDMADKGYIFKGAKPVYWSWSSESALAEAEIEYH-DIESTSLFYANRVKDGKG-ILDN 223
Query: 196 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-----VIVAKCLVESLKWTFQ 250
T L ++WTTTP+++ A++ I P EY+V V+ AN V+ A L ES +
Sbjct: 224 NTYL--IVWTTTPFTITASRGITLGPDFEYAV--VQPANDDRKFVVAAGLLAESAERFGW 279
Query: 251 TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
D EVV G+ L IT HP ++ +L ++ A V+ GTGLVH AP G+DD+ +
Sbjct: 280 NDYEVVATHLGKELDRITAQHPWDQNVEEL-VMNADHVTLDSGTGLVHTAPGFGEDDYNV 338
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW--TENYQHSYP 368
A +P + +G + +AGP LEG D D V+ ++ LW TE HSYP
Sbjct: 339 GKAYGLPADVTVDAKGFMTSEAGPDLEG-KFYDDVVDIVIDKLKRANLWMATEKITHSYP 397
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
+DWRTKKP+I +A QWF ++ + + L
Sbjct: 398 FDWRTKKPIIWRAVPQWFASVDQFRQDIL 426
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVIL 1166
+ +G + +AGP LEG + D V+ ++ LW TE HSYP+DWRTKKP+I
Sbjct: 350 VDAKGFMTSEAGPDLEG-KFYDDVVDIVIDKLKRANLWMATEKITHSYPFDWRTKKPIIW 408
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A QWF ++ + + L ++ VNF PE KK L + I R W ISRQRVWGVP+P+F
Sbjct: 409 RAVPQWFASVDQFRQDILDQIDQVNFYPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIF 468
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I++ I+H L ++HG ++W+ ++LL
Sbjct: 469 YAEDGTAILDRDIIEHIAQLFEKHGSNYWFEHSAQELL 506
>gi|404408457|ref|YP_006691172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
gi|404242606|emb|CBY64006.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
Length = 921
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 226/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 225/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|398304129|ref|ZP_10507715.1| isoleucyl-tRNA ligase [Bacillus vallismortis DV1-F-3]
Length = 921
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 222/617 (35%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLDSGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVEN+ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTIKGKDLENIVAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDAKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERED 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+L G L + T +++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E+++HL
Sbjct: 754 LSAPILPHTADELWAHL 770
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLDSGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E++ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ENVASACGFDQYEVTRTIKGKDLENIVAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDAKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|262038685|ref|ZP_06012045.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261747237|gb|EEY34716.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 932
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 328/621 (52%), Gaps = 56/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EYK D +S SIY+K++ ++ L G + +IWTTTPW+LPAN IA N
Sbjct: 199 TALAEAEIEYK-DVVSPSIYVKMEASKDLLDKL-GTDEASIVIWTTTPWTLPANLGIALN 256
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
+Y + + N+++AK L E + +++ +F G L+ Y HP R+
Sbjct: 257 KDFDYGLYKTEKGNLVLAKELAEKAFGEMKLSYELIKEFKGNKLERTHYKHPFL--DREG 314
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ V+ GTG VH AP HG DD+++ A I +L+ + +QG + +AG EGL
Sbjct: 315 LVILGEHVTLDAGTGAVHTAPGHGVDDYVVGQAYGIGILSPVDDQGHMTKEAGK-YEGL- 372
Query: 598 ILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEA 653
++ +E ++ + HSYP+DWR+KKPVI +A++QWFI D ++ A
Sbjct: 373 FYKKASKVIVEDIEASGHLMAYSEFTHSYPHDWRSKKPVIYRATEQWFISVDESDVRQNA 432
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L LE+V FVPE K + + RP W ISRQRVWGVPIP+FY+ +T +I +
Sbjct: 433 LKALEDVEFVPEWGKNRINAMLETRPDWTISRQRVWGVPIPLFYNAETNEVIYEPEIMDK 492
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVL-- 763
+ + G D WW E+++ + + K I+D+WFDSG S VL
Sbjct: 493 VIEAVKKKGTDIWWKYEAEEIIGEELLEKYNLKGVKLRKERSIMDVWFDSGASHRGVLIP 552
Query: 764 --KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+PA +Y+EG DQ GWF SSLLTS+A AP++ + HGFV+D +G KMSKS+GN
Sbjct: 553 RGLHRPADLYLEGSDQHRGWFQSSLLTSIASTKDAPYKRILTHGFVMDGQGRKMSKSLGN 612
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I DI + YG D+LR WV++ ++ V
Sbjct: 613 TIVPKDIIE-----------------------------KYGADILRLWVSSVDYRE-DVR 642
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I +NIL D ++IR++ R+L+G L++ + +D + L +L E +
Sbjct: 643 ISENILQQMSDAYRRIRNTARFLMGNLNDFDYENKKVDYEEMYEIDKWALHKLEELKEKT 702
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y ++++ + + F ++SAFY +VKDRLYC+ + R S L + VL
Sbjct: 703 TEYYDKYEFYSLFQEITYFCSIDMSAFYLDIVKDRLYCEEKDSIERRSAQTVLTEVLKVL 762
Query: 998 LRTVAPIMPHLAEEVYSHLPS 1018
+R ++P++ AEE++ +P
Sbjct: 763 VRVISPVLSFTAEEIWERIPE 783
Score = 289 bits (740), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 232/384 (60%), Gaps = 14/384 (3%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT-- 78
F+LHDGPPYANG HIGHA+NK+LKDI L+ L+G Y+PGWD HGLPIE K +
Sbjct: 57 FVLHDGPPYANGDIHIGHALNKVLKDIILKYKRLRGYNAPYIPGWDTHGLPIEWKIMEEY 116
Query: 79 -SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
K + ++PL IR++ K +AL+ + QKAEF G+L +W+ + Y T EY QL F
Sbjct: 117 GEKARNMTPLQIRQECKKYALKWVEKQKAEFIRLGILGNWD-DPYITLKPEYEAEQLKVF 175
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGAT 197
+Y+ Y+Y+ LKPVYWSP++ TALAE+E+EYK D VS SIY+K++ ++ L G
Sbjct: 176 KEIYENGYVYKGLKPVYWSPTTETALAEAEIEYK-DVVSPSIYVKMEASKDLLDKL-GTD 233
Query: 198 DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEVVC 257
+ +IWTTTPW+LPAN IA N +Y + + N+++AK L E + E++
Sbjct: 234 EASIVIWTTTPWTLPANLGIALNKDFDYGLYKTEKGNLVLAKELAEKAFGEMKLSYELIK 293
Query: 258 DFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIP 317
+F G L+ Y HP R+ ++ V+ GTG VH AP HG DD+++ A I
Sbjct: 294 EFKGNKLERTHYKHPFL--DREGLVILGEHVTLDAGTGAVHTAPGHGVDDYVVGQAYGIG 351
Query: 318 VLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 375
+L+ + +QG + +AG EGL ++ +E ++ + HSYP+DWR+KK
Sbjct: 352 ILSPVDDQGHMTKEAGK-YEGL-FYKKASKVIVEDIEASGHLMAYSEFTHSYPHDWRSKK 409
Query: 376 PVILKASQQWFI--DTERIKPEAL 397
PVI +A++QWFI D ++ AL
Sbjct: 410 PVIYRATEQWFISVDESDVRQNAL 433
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + +QG + +AG EGL + ++ +E ++ + HSYP+DWR+KKP
Sbjct: 353 LSPVDDQGHMTKEAGK-YEGL-FYKKASKVIVEDIEASGHLMAYSEFTHSYPHDWRSKKP 410
Query: 1164 VILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGV 1221
VI +A++QWFI D ++ AL LE V FVPE K + + RP W ISRQRVWGV
Sbjct: 411 VIYRATEQWFISVDESDVRQNALKALEDVEFVPEWGKNRINAMLETRPDWTISRQRVWGV 470
Query: 1222 PIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
PIP+FY+ +T +I + + + G D WW
Sbjct: 471 PIPLFYNAETNEVIYEPEIMDKVIEAVKKKGTDIWW 506
>gi|402082969|gb|EJT77987.1| isoleucyl-tRNA synthetase [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 929
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 226/637 (35%), Positives = 330/637 (51%), Gaps = 55/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +H S + Y+K+ + + L G L +IWTTTPW+LPANQ +A +
Sbjct: 130 TALAEAELEYNENHQSTAAYVKLPVCDADSGRLAGIDRLKLVIWTTTPWTLPANQAVAVH 189
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID---VVCDFPGQYLQDITYIHPI-NKE 533
L Y V + +++ + +E + + +V G L+++TY + + E
Sbjct: 190 DDLTYMVVKLGDDALVIGEDALERIMAACSLEEAPEVLVSSLKGSELKELTYTNRLQGAE 249
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG--- 590
+ ++ AGFVS+ G+GLVH AP HG DD+ + + +P ++ + + G ++ +A
Sbjct: 250 AKPQPVVHAGFVSAESGSGLVHLAPGHGFDDYDVCIPLGMPAVSAVDDAGLFTEEACRLF 309
Query: 591 PGLE----GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
PGL G + L G VL L+ DVL + ++H YPYDWRTK+P++++A+ QWF D
Sbjct: 310 PGLPRSGGGADALKGGSKMVLQLLGDDVLHSHKHRHKYPYDWRTKQPIVVRATAQWFADV 369
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTII 703
IK +AL L V F+PE+ + L I R WCISRQR WGVPIP YD G+ ++
Sbjct: 370 GSIKQDALDALAPVRFIPETGRTRLESFIKGRSEWCISRQRAWGVPIPALYDEATGEAVM 429
Query: 704 VNEANIKHFCTLIDEHGPDFWWSLSVEQ---LLNTSDVNSNVTKSNDILDIWFDSGISW- 759
+E I H I + WWS + ++ + + + D +D+WFDSG SW
Sbjct: 430 TDEV-IAHIIQAIKKCNISRWWSDAPDERRWIPKALRDGRKLRRGTDTMDVWFDSGSSWM 488
Query: 760 SHVLKDKPAHVYMEGMDQINGWFMSSLLTSV---ALKHTAPFRNVFLHGFVVDEKGAKMS 816
+ PA VY+EG DQ GWF SSLLT A ++ PFR + HGF +D KG KMS
Sbjct: 489 QQTVTSGPADVYLEGTDQHRGWFQSSLLTRAADPAGGYSTPFRTLVTHGFTLDSKGKKMS 548
Query: 817 KSVGNVISAHDITQGAKKLPAY------EKSVGNVISAHDITQGAKKLP-----AYGVDV 865
KS+GN+IS D+ +G + LP EK++G TQ + P A G D
Sbjct: 549 KSLGNIISPADVMEG-RLLPPLKSNKKSEKALG--------TQENQDAPETGYDALGPDA 599
Query: 866 LRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV 924
LR W A+ +KD V IG L S ++K R+ L+ LLG + + DV
Sbjct: 600 LRLWAASVDYTKD--VVIGTTALTSVHSMLKKYRTILKMLLGSMEGPLLGEARPASRYDV 657
Query: 925 YMLKRLCEFQNTMDTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGE 981
L +TM + Y F++ + + +V + LSA Y +KDRLYC
Sbjct: 658 IDQIALMNLSDTMAAVAKHYDSFEFYKGLAAMNVWVSHHLSAVYLEALKDRLYC------ 711
Query: 982 ARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
R G L IF R +AP+ P L EE + H P+
Sbjct: 712 -RNDGDGALLPIFDGFCRMLAPVAPLLVEEAWHHAPN 747
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 214/378 (56%), Gaps = 28/378 (7%)
Query: 47 ITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSKDKLLS----------------PLDIR 90
+ LR + QG RVHY PGWDCHGLPIEL+A+ S S P +R
Sbjct: 1 MILRVKIQQGYRVHYRPGWDCHGLPIELQALASFQAARSGGNLGPTSSALTQDMEPARVR 60
Query: 91 KKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDL 150
A+ A T+ Q EF S+GV+ADW+ + + T Y+ +QL F + + I R
Sbjct: 61 GLARGLAESTVAKQMREFRSFGVMADWDAH-WTTMQPSYIYDQLGLFRRMAARGLIQRRH 119
Query: 151 KPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWS 210
KPVYWSPSSRTALAE+ELEY +H S + Y+K+ + + L G L +IWTTTPW+
Sbjct: 120 KPVYWSPSSRTALAEAELEYNENHQSTAAYVKLPVCDADSGRLAGIDRLKLVIWTTTPWT 179
Query: 211 LPANQFIAFNPALEYSVASVKGANVIVAKCLVESL--KWTFQTDIEV-VCDFPGQYLQDI 267
LPANQ +A + L Y V + +++ + +E + + + EV V G L+++
Sbjct: 180 LPANQAVAVHDDLTYMVVKLGDDALVIGEDALERIMAACSLEEAPEVLVSSLKGSELKEL 239
Query: 268 TYIHPI-NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 326
TY + + E + ++ AGFVS+ G+GLVH AP HG DD+ + + +P ++ + + G
Sbjct: 240 TYTNRLQGAEAKPQPVVHAGFVSAESGSGLVHLAPGHGFDDYDVCIPLGMPAVSAVDDAG 299
Query: 327 KYSPDAG---PGLE----GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 379
++ +A PGL G + L G VL L+ DVL + ++H YPYDWRTK+P+++
Sbjct: 300 LFTEEACRLFPGLPRSGGGADALKGGSKMVLQLLGDDVLHSHKHRHKYPYDWRTKQPIVV 359
Query: 380 KASQQWFIDTERIKPEAL 397
+A+ QWF D IK +AL
Sbjct: 360 RATAQWFADVGSIKQDAL 377
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 1121 PGLE----GLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
PGL G + L G VL L+ DVL + ++H YPYDWRTK+P++++A+ QWF D
Sbjct: 310 PGLPRSGGGADALKGGSKMVLQLLGDDVLHSHKHRHKYPYDWRTKQPIVVRATAQWFADV 369
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTII 1233
IK +AL L V F+PE+ + L I R WCISRQR WGVPIP YD G+ ++
Sbjct: 370 GSIKQDALDALAPVRFIPETGRTRLESFIKGRSEWCISRQRAWGVPIPALYDEATGEAVM 429
Query: 1234 VNEANIKHFCTLIDEHGPDFWWS 1256
+E I H I + WWS
Sbjct: 430 TDEV-IAHIIQAIKKCNISRWWS 451
>gi|426194741|gb|EKV44672.1| hypothetical protein AGABI2DRAFT_187407 [Agaricus bisporus var.
bisporus H97]
Length = 1011
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 242/689 (35%), Positives = 344/689 (49%), Gaps = 94/689 (13%)
Query: 403 GNILGRVGITHDRPGT--ALAESELEYKPDHISKSIYLKIKL--NQVPAHLLE------G 452
G I R H P + ALAE+EL YK DH+S S+++ L N L+ G
Sbjct: 198 GLICRRYRPVHFSPSSRSALAEAELIYKDDHVSHSVFVNFDLDKNNTKNEKLQALFASVG 257
Query: 453 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVKGANVIVAKCLVENLKWTFQTDID 511
+ L+WTTTPW+L AN IA +P L Y + S VIV+K +E L +
Sbjct: 258 NEPVKVLVWTTTPWTLTANMGIAVHPDLIYVITRSAASEVVIVSKERLEALAEILGEGTE 317
Query: 512 VVCDFPGQYLQDITYIHPINKE---QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF--- 565
VV + G L Y HPI Q K++PA V+S GTGLVHCAPAHG +D+
Sbjct: 318 VVAELTGSDLVGAVY-HPIFSSLTAQASFKVVPASHVTSDSGTGLVHCAPAHGAEDYHAF 376
Query: 566 --LLALAEKIPVLNLITNQGKYSPD--------AGPGLEGLNILGDGKDQVLHLVEP--D 613
L L+ ++ + +GK+S D A +EG +LGDG ++++++
Sbjct: 377 HSLDLLSNPDDMICHVDGEGKFSHDVANVLGFEAAKDVEGKEVLGDGSKAIVNILKRLNR 436
Query: 614 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRD 673
++ + +H YPYDW+T KP+I+ A+ QWF + + IK AL L V+F P ++ L
Sbjct: 437 LVKIKRIKHRYPYDWKTDKPIIVTATSQWFANLDEIKDNALEALCRVSFYPPQSRNRLES 496
Query: 674 QIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQ 731
I R WCISRQRVWGVPIP + DT ++ ++H ++++E G +WW+ VE
Sbjct: 497 FIRSRSEWCISRQRVWGVPIPSLHHIPTDTAYLDNITLEHILSVLEEKGVAYWWTGPVEA 556
Query: 732 LLNTSDVNSNVT----------KSNDILDIWFDSGISWSHVL-------KDKPAHVYMEG 774
+ S + S T K D +D+WFDSG SWS + ++ A V +EG
Sbjct: 557 FIPPSLLTSTATNQGEVGKMWKKGTDTMDVWFDSGTSWSMLQNLDGEKHREFLADVCLEG 616
Query: 775 MDQINGWFMSSLLTSVA------LKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDI 828
DQ GWF S LLT V ++P+R++ HG V+DE G KMSKS+GN++S I
Sbjct: 617 SDQHRGWFQSQLLTKVGSHSDTLTTPSSPYRDLITHGMVLDESGKKMSKSLGNIVSPMTI 676
Query: 829 TQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTVPIGKNIL 887
G K KK PAYG DVLR WVA +D + IG IL
Sbjct: 677 IHGGKD--------------------KKKHPAYGADVLRLWVATVEYWRD--MAIGPKIL 714
Query: 888 NSSQDDVQKIRSSLRYLLGVLHNHS----------ESTGSISRYVDVYMLKRLCEFQNTM 937
+ + + ++KIR+S R+LLG L + + E G RYV + L Q T
Sbjct: 715 SQAAETMRKIRNSTRFLLGNLSDGAALTDFDRVPREQLGLAERYV----MHELYTLQQTA 770
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y + + R L +F LS+ YF + KD LY +S R + + L I +
Sbjct: 771 FEGYATYNFPRVMSALGHFANITLSSLYFDITKDCLYANSTKSFERRAVVTVLEQISETM 830
Query: 998 LRTVAPIMPHLAEEVYS--HLPSRQGTFS 1024
API+PHLAEEV++ H S+ F+
Sbjct: 831 TAVYAPILPHLAEEVHAIRHPESKSSFFA 859
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/429 (42%), Positives = 254/429 (59%), Gaps = 35/429 (8%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ E GKP F+LHDGPPYANG H+GHA+NKILKDI +RS L+ GKRV+Y+PGW
Sbjct: 55 DLYRWQWEQRRGKPSFVLHDGPPYANGDLHMGHALNKILKDIIVRSQLMLGKRVNYLPGW 114
Query: 66 DCHGLPIELKAIT--SKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW--EHN 120
DCHGLPIE KA+ KD + + P IR+ A AL I++QK++F S+GV+ADW
Sbjct: 115 DCHGLPIENKALQELGKDSRSVDPTTIREAANTTALREISSQKSQFWSFGVMADWGSSEA 174
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T D Y QL F + ++ I R +PV++SPSSR+ALAE+EL YK DHVS S++
Sbjct: 175 TYRTLDHNYEMRQLRIFRKMVEKGLICRRYRPVHFSPSSRSALAEAELIYKDDHVSHSVF 234
Query: 181 LKIKL--NQVPAHLLE------GATDLHALIWTTTPWSLPANQFIAFNPALEYSVA-SVK 231
+ L N L+ G + L+WTTTPW+L AN IA +P L Y + S
Sbjct: 235 VNFDLDKNNTKNEKLQALFASVGNEPVKVLVWTTTPWTLTANMGIAVHPDLIYVITRSAA 294
Query: 232 GANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE---QRDLKLLPAGFV 288
VIV+K +E+L EVV + G L Y HPI Q K++PA V
Sbjct: 295 SEVVIVSKERLEALAEILGEGTEVVAELTGSDLVGAVY-HPIFSSLTAQASFKVVPASHV 353
Query: 289 SSSKGTGLVHCAPAHGQDDF-----LLALAEKIPVLNLITNQGKYSPD--------AGPG 335
+S GTGLVHCAPAHG +D+ L L+ ++ + +GK+S D A
Sbjct: 354 TSDSGTGLVHCAPAHGAEDYHAFHSLDLLSNPDDMICHVDGEGKFSHDVANVLGFEAAKD 413
Query: 336 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 393
+EG +LGDG ++++++ ++ + +H YPYDW+T KP+I+ A+ QWF + + IK
Sbjct: 414 VEGKEVLGDGSKAIVNILKRLNRLVKIKRIKHRYPYDWKTDKPIIVTATSQWFANLDEIK 473
Query: 394 PEAL--VCK 400
AL +C+
Sbjct: 474 DNALEALCR 482
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 44/261 (16%)
Query: 1053 ARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV------YSHLPSRQGTFSSFC-------H 1099
A L+G + ++H PI L + SH+ S GT C
Sbjct: 320 AELTGSDLVGAVYH-------PIFSSLTAQASFKVVPASHVTSDSGTGLVHCAPAHGAED 372
Query: 1100 FKVYHHLNLITN----------QGKYSPD--------AGPGLEGLNILGEGKDQVLHLVE 1141
+ +H L+L++N +GK+S D A +EG +LG+G ++++++
Sbjct: 373 YHAFHSLDLLSNPDDMICHVDGEGKFSHDVANVLGFEAAKDVEGKEVLGDGSKAIVNILK 432
Query: 1142 P--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKK 1199
++ + +H YPYDW+T KP+I+ A+ QWF + + IK AL L V+F P ++
Sbjct: 433 RLNRLVKIKRIKHRYPYDWKTDKPIIVTATSQWFANLDEIKDNALEALCRVSFYPPQSRN 492
Query: 1200 SLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSL 1257
L I R WCISRQRVWGVPIP + DT ++ ++H ++++E G +WW+
Sbjct: 493 RLESFIRSRSEWCISRQRVWGVPIPSLHHIPTDTAYLDNITLEHILSVLEEKGVAYWWTG 552
Query: 1258 PVEQLLNTSDVNSNVTKSNQG 1278
PVE + S + S T +NQG
Sbjct: 553 PVEAFIPPSLLTS--TATNQG 571
>gi|405123917|gb|AFR98680.1| isoleucyl-tRNA synthetase [Cryptococcus neoformans var. grubii H99]
Length = 1026
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 232/651 (35%), Positives = 336/651 (51%), Gaps = 70/651 (10%)
Query: 418 TALAESELEYKPDHISKSIY--LKIKLNQVPAHLLE--------GATDLHALIWTTTPWS 467
TALAE+ELEYK H S+S+Y L ++ + + L E DL +IWTTTPWS
Sbjct: 258 TALAEAELEYKDGHRSRSVYVSLPVQEDDMSDALKEIYDSVKEQDGRDLSLVIWTTTPWS 317
Query: 468 LPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDF-PGQYLQDITY 526
LP N +A + +EY V S + V + + VV + G L Y
Sbjct: 318 LPGNSGVAVHNDMEYVVTSNGQGRLFVLASERKEAMEKLMGPLKVVGELKAGSQLVGTQY 377
Query: 527 ---IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNL---IT 580
HP + + AG V+S GTGLVH APAHG +D++ I + L I
Sbjct: 378 NHIFHPPSSPLPKPIVFAAGHVTSQTGTGLVHSAPAHGYEDYVAFNEAGIMLEKLRCPID 437
Query: 581 NQGKYSPD----AGPGLE------GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDW 628
+ GK++ + AG G E G +LG G D ++ L+ +L E +H YPYDW
Sbjct: 438 DDGKFTEELVSWAGAGDESVSSLVGKEVLGKGTDAMVDLLRERGVLLAEETIEHRYPYDW 497
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
++KKP+I++A+ QWF D E IK +ALA LEEV F P A+K L + R WCISRQR
Sbjct: 498 KSKKPIIIRATPQWFADVEHIKEDALAALEEVYFHPAQARKRLEAFVLSRSEWCISRQRS 557
Query: 689 WGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSN 746
WGVPIP +D G ++ + ++H +++D G D+WW+ VE+ + +TK
Sbjct: 558 WGVPIPALFDSAGQPLMTPDV-LEHVISVLDAKGVDYWWTGPVEEFVPPVHKGQQITKGF 616
Query: 747 DILDIWFDSGISWSHVLKD--KP-----AHVYMEGMDQINGWFMSSLLTSV--ALKHTAP 797
D LD+WFDSG SW+ + + +P A VY+EG DQ GWF SSLLT + AP
Sbjct: 617 DTLDVWFDSGSSWTMLREANLRPRSFPLADVYLEGSDQHRGWFQSSLLTKIIGTDDRKAP 676
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
+ V HGFV+DE+G KMSKS GN +S +I G E S
Sbjct: 677 YGTVITHGFVMDEEGEKMSKSAGNGLSPMEIIHG------LEDS---------------- 714
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSES--T 915
PAYG DVLR W AA IG + ++ + ++++R++ R+LL +
Sbjct: 715 -PAYGADVLRLW-AASVDYTSDASIGPSSISHVNELLRRLRNTTRFLLANTSGQDKIFLE 772
Query: 916 GSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARAS-RVLLNFVVNELSAFYFTLVKDRLY 974
S R +D Y+L L + + Y + +++A+ + F + LS YF ++KD LY
Sbjct: 773 PSSLRIIDRYVLHELASLEVLVQEAYDGYNFSKAAVHSISTFATSTLSTLYFDIIKDTLY 832
Query: 975 CDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL--PSRQGTF 1023
CD N AR + + L ++ L++ +API+PHL EE+Y ++ P + F
Sbjct: 833 CDPSNSTARNNVVGVLQHVLLRLVQMMAPIVPHLGEELYENMDGPKKSSVF 883
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 245/444 (55%), Gaps = 51/444 (11%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY Q + + P F+LHDGPPYANG H+GHA+NK++KDI R N+++G+RVHY+PGW
Sbjct: 83 ELYRQQYDE-SPDPLFVLHDGPPYANGHLHMGHALNKVIKDIINRYNVIRGRRVHYIPGW 141
Query: 66 DCHGLPIELKAITSKDKL---LSPLDIRKKAKNFALETINTQKAEFESWGVLADW--EHN 120
DCHGLPIE KA+ + KL L+P +R +A+ AL+ I+ QK E + GV+ADW E
Sbjct: 142 DCHGLPIEQKALAAIGKLHTSLTPDQVRAQARQVALDAIDIQKTEMRALGVMADWDSEKR 201
Query: 121 CYHTF----------------DKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALA 164
Y T D ++ QL F + ++ ++ L+PVY+SPSSRTALA
Sbjct: 202 TYRTLGKLSQILKASCTEPVQDHDFEIRQLRLFQAMVQKGFVTHRLRPVYYSPSSRTALA 261
Query: 165 ESELEYKPDHVSKSIY--LKIKLNQVPAHLLE--------GATDLHALIWTTTPWSLPAN 214
E+ELEYK H S+S+Y L ++ + + L E DL +IWTTTPWSLP N
Sbjct: 262 EAELEYKDGHRSRSVYVSLPVQEDDMSDALKEIYDSVKEQDGRDLSLVIWTTTPWSLPGN 321
Query: 215 QFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEVVCDF-PGQYLQDITY---I 270
+A + +EY V S + V + ++VV + G L Y
Sbjct: 322 SGVAVHNDMEYVVTSNGQGRLFVLASERKEAMEKLMGPLKVVGELKAGSQLVGTQYNHIF 381
Query: 271 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNL---ITNQGK 327
HP + + AG V+S GTGLVH APAHG +D++ I + L I + GK
Sbjct: 382 HPPSSPLPKPIVFAAGHVTSQTGTGLVHSAPAHGYEDYVAFNEAGIMLEKLRCPIDDDGK 441
Query: 328 YSPD----AGPGLE------GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 375
++ + AG G E G +LG G D ++ L+ +L E +H YPYDW++KK
Sbjct: 442 FTEELVSWAGAGDESVSSLVGKEVLGKGTDAMVDLLRERGVLLAEETIEHRYPYDWKSKK 501
Query: 376 PVILKASQQWFIDTERIKPEALVC 399
P+I++A+ QWF D E IK +AL
Sbjct: 502 PIIIRATPQWFADVEHIKEDALAA 525
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 15/180 (8%)
Query: 1109 ITNQGKYSPD----AGPGLE------GLNILGEGKDQVLHLVEPD--VLWTENYQHSYPY 1156
I + GK++ + AG G E G +LG+G D ++ L+ +L E +H YPY
Sbjct: 436 IDDDGKFTEELVSWAGAGDESVSSLVGKEVLGKGTDAMVDLLRERGVLLAEETIEHRYPY 495
Query: 1157 DWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQ 1216
DW++KKP+I++A+ QWF D E IK +ALA LE V F P A+K L + R WCISRQ
Sbjct: 496 DWKSKKPIIIRATPQWFADVEHIKEDALAALEEVYFHPAQARKRLEAFVLSRSEWCISRQ 555
Query: 1217 RVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
R WGVPIP +D G ++ + ++H +++D G D+WW+ PVE+ + +TK
Sbjct: 556 RSWGVPIPALFDSAGQPLMTPDV-LEHVISVLDAKGVDYWWTGPVEEFVPPVHKGQQITK 614
Score = 45.1 bits (105), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 1039 IAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL--PSRQGTF 1094
I K LYCD N AR + + L ++ L++ +API+PHL EE+Y ++ P + F
Sbjct: 826 IIKDTLYCDPSNSTARNNVVGVLQHVLLRLVQMMAPIVPHLGEELYENMDGPKKSSVF 883
>gi|116873455|ref|YP_850236.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123466497|sp|A0AKC5.1|SYI_LISW6 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|116742333|emb|CAK21457.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 921
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 226/618 (36%), Positives = 325/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKKSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ NL K F+ D VV G L I HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPNLREKLGFE-DATVVKTVRGSELDRIVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ D PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFT-DEAPGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 KAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPDGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELTRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSNDRRAMQTVFYEAAVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 259 bits (662), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 222/398 (55%), Gaps = 16/398 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+ +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNTGRKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKKSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+L K F+ D VV G L I HP RD ++ ++ GTG VH A
Sbjct: 269 PNLREKLGFE-DATVVKTVRGSELDRIVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ D PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFT-DEAPGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDT 1176
D PG EG+ K L E L + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 355 DEAPGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + + L ++GVN+ P + L + + R W ISRQR WGVP+P+FY +G+ II
Sbjct: 415 DAFRDDLLKAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+E I H L EHG + W+ V+ LL
Sbjct: 475 DE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|423098920|ref|ZP_17086628.1| isoleucine--tRNA ligase [Listeria innocua ATCC 33091]
gi|370794747|gb|EHN62510.1| isoleucine--tRNA ligase [Listeria innocua ATCC 33091]
Length = 921
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 223/400 (55%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+ +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRKTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|387927108|ref|ZP_10129787.1| isoleucyl-tRNA synthetase [Bacillus methanolicus PB1]
gi|387589252|gb|EIJ81572.1| isoleucyl-tRNA synthetase [Bacillus methanolicus PB1]
Length = 924
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 328/618 (53%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ K+ L TD +IWTTTPW++PAN I +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVGFKVKDGKGVL---DTDTQIVIWTTTPWTIPANLGITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L Y VA+ KG ++A+ L+E++ + VV G L+ + HP+ R
Sbjct: 247 PELTYIVANNKGKKFLIAEKLLESVSKELDWENPSVVKRVKGAELEYVIASHPLY--DRH 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF + + VL + +G Y + PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFNVGQKYGLDVLAPVDEKG-YMTNEAPGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L+ ++ HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 364 FYDEANKAITQKLEEAGALFKLSFITHSYPHDWRTKKPVIFRATSQWFASIKDFRKELLD 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + + R WCISRQRVWGVPIPVFY +G+ II +E I H
Sbjct: 424 AIKETKWVPAWGETRLHNMVRDRGDWCISRQRVWGVPIPVFYAENGEPIITDET-INHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 483 DLFRKYGSNVWFEREAKNLLPEGFIHPGSPNGRFTKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WVA+ V +
Sbjct: 603 -----------VPA------------------KVMNQLGADILRLWVAS-VDYQSDVRVS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++ R+LLG L + + ++S R VD +ML +L + +
Sbjct: 633 DSILKQVAEVYRKIRNTFRFLLGNLADFNPEKDAVSYEDLREVDQFMLVKLNKLIKLVHE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
YG ++++ + NF +LSAFY KD LY ++ + + R S L+ L +
Sbjct: 693 SYGNYEFSGIYHAVNNFCTIDLSAFYLDFAKDVLYIEAADNKERRSIQTVLYESLLALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLP 1017
VAPI+ H A+EV++H+P
Sbjct: 753 LVAPILSHTADEVWAHIP 770
Score = 289 bits (739), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 229/396 (57%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P FILHDGPPYANG H+GHA+NKILKDI +R + G YVPGWD
Sbjct: 36 IYQKVQERTKGRPMFILHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK + +A E I+ Q+ +F+ GV DWE N Y
Sbjct: 96 THGLPIE-QALTNKGVNRKEMTVAEFRKLCEEYAYEQIDNQRTQFKRLGVRGDWE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVGF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
K+ L TD +IWTTTPW++PAN I +P L Y VA+ KG ++A+ L+E
Sbjct: 213 KVKDGKGVL---DTDTQIVIWTTTPWTIPANLGITVHPELTYIVANNKGKKFLIAEKLLE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ + VV G L+ + HP+ R ++ V++ GTG VH AP
Sbjct: 270 SVSKELDWENPSVVKRVKGAELEYVIASHPLY--DRHSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF + + VL + +G Y + PG EGL K L E L+ +
Sbjct: 328 HGEDDFNVGQKYGLDVLAPVDEKG-YMTNEAPGFEGLFYDEANKAITQKLEEAGALFKLS 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 387 FITHSYPHDWRTKKPVIFRATSQWFASIKDFRKELL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Query: 1111 NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKAS 1169
++ Y + PG EGL K L E L+ ++ HSYP+DWRTKKPVI +A+
Sbjct: 348 DEKGYMTNEAPGFEGLFYDEANKAITQKLEEAGALFKLSFITHSYPHDWRTKKPVIFRAT 407
Query: 1170 QQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-- 1227
QWF + + E L ++ +VP + L + + R WCISRQRVWGVPIPVFY
Sbjct: 408 SQWFASIKDFRKELLDAIKETKWVPAWGETRLHNMVRDRGDWCISRQRVWGVPIPVFYAE 467
Query: 1228 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L ++G + W+ + LL
Sbjct: 468 NGEPIITDE-TINHVSDLFRKYGSNVWFEREAKNLL 502
>gi|392572262|gb|EIW65419.1| hypothetical protein TREMEDRAFT_46186 [Tremella mesenterica DSM 1558]
Length = 877
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 246/745 (33%), Positives = 370/745 (49%), Gaps = 72/745 (9%)
Query: 315 KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTK 374
++ L I Q +PD GP I + + L +E + E + DW +
Sbjct: 138 EMKALERIGRQAA-NPDLGPN----RIRSEARKTALKAIE--IQKREQQELGVMADWDSP 190
Query: 375 KPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRPGT--ALAESELEYKPDHI 432
V + + R+ + +V K G I R+ T+ P T ALAE+EL+YK H
Sbjct: 191 DGVYRTLDHDFEVRQLRLF-QRMVSK--GYIAHRLRPTYYSPSTRTALAEAELKYKDGHK 247
Query: 433 SKSIYLKI---KLNQVPA--------HLLEGATDLHALIWTTTPWSLPANQFIAFNPALE 481
S+S+Y+ K + PA +G L IWTTT WSLP N +A N +E
Sbjct: 248 SRSVYVAFPVEKSDMSPALTKAYEDAQKQKGPVSLSLAIWTTTAWSLPGNMGVAVNQDME 307
Query: 482 YSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL---K 538
YS+ A ++V ++ + G L Y H + + L
Sbjct: 308 YSIVRSDTAGLLVVATERLLALQNILGPLESLHSLSGADLVGTRYTHLFHSKTSSLPRPT 367
Query: 539 LLPAGFVSSSKGTGLVHCAPAHGQDDFL-LALAEKIP--VLNLITNQGKYSP-------- 587
+ + V + GTGLVH APAHG +D+ + +A +P + I + G+++
Sbjct: 368 VFASNHVLPTSGTGLVHSAPAHGYEDYQGMTVAGVLPKELRCPIDDDGRFTAAVTRETDK 427
Query: 588 DAGPGLEGLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
D L G +LG G ++ L+ E +L E +H YPYDW+T +P+I++A+ QWF D
Sbjct: 428 DDVARLIGQEVLGAGIGTMIDLLRSEGSLLAEEVIEHRYPYDWKTNQPIIVRATPQWFAD 487
Query: 646 TERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIV 704
E IK EA+ LEEV+FVP ++ L I R WCISRQR WGVPIP Y + I+
Sbjct: 488 VESIKDEAVKALEEVHFVPPQSRNRLEAFIVSRSEWCISRQRSWGVPIPALYTETGEPII 547
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHV-- 762
+E + H +++ E G D WW+ E + V K D LD+WFDSG SWS +
Sbjct: 548 DEDTMTHIISVLQEKGTDHWWTGPAEDFIPPGLKGQRVYKGTDTLDVWFDSGSSWSMLQG 607
Query: 763 LKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKH----TAPFRNVFLHGFVVDEKGA 813
LK + A VY+EG DQ GWF SS+LT ++ P+ + HGFV+DE+G
Sbjct: 608 LKSEEDSTPLADVYLEGSDQHRGWFQSSILTKISADDLNNPRPPYGTLITHGFVLDEEGQ 667
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA- 872
KMSKS GN IS ++ G+K DIT + LPA G D LR W A+
Sbjct: 668 KMSKSEGNGISPMEVIHGSK----------------DITLMKQSLPASGTDALRIWAASV 711
Query: 873 HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLG-VLHNHSESTGSIS-RYVDVYMLKRL 930
++D V IG + + + + ++K+RS+LR+LL ++S + +D Y++K L
Sbjct: 712 EYTRD--VSIGPSSIAQASETLRKLRSALRFLLANTAPGDAKSLDQVELSPLDSYVIKEL 769
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
+ + T+ Y + + + + L F + LS+ YF +KD LYC++ R + + TL
Sbjct: 770 DKVRQTVIDAYDSYAFNKVLQTLTTFTASTLSSLYFDTIKDSLYCNAAADPTRQAVIATL 829
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSH 1015
++ LL+ +API+PHLAEEV+ H
Sbjct: 830 DHVLRQLLKMIAPIVPHLAEEVFEH 854
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/426 (38%), Positives = 232/426 (54%), Gaps = 35/426 (8%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY QR K EF+LHDGPPYANG H+GHA+NK+LKD+ R +++G RVHYVPGW
Sbjct: 72 DLYRKQRSRKTAK-EFVLHDGPPYANGNLHMGHALNKVLKDMVNRWKVMRGYRVHYVPGW 130
Query: 66 DCHGLPIELKAI-----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH- 119
DCHGLPIE+KA+ + + L P IR +A+ AL+ I QK E + GV+ADW+
Sbjct: 131 DCHGLPIEMKALERIGRQAANPDLGPNRIRSEARKTALKAIEIQKREQQELGVMADWDSP 190
Query: 120 -NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
Y T D ++ QL F + + YI L+P Y+SPS+RTALAE+EL+YK H S+S
Sbjct: 191 DGVYRTLDHDFEVRQLRLFQRMVSKGYIAHRLRPTYYSPSTRTALAEAELKYKDGHKSRS 250
Query: 179 IYLKI---KLNQVP--------AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV 227
+Y+ K + P A +G L IWTTT WSLP N +A N +EYS+
Sbjct: 251 VYVAFPVEKSDMSPALTKAYEDAQKQKGPVSLSLAIWTTTAWSLPGNMGVAVNQDMEYSI 310
Query: 228 ASVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDL---KLLP 284
A ++V +E + G L Y H + + L +
Sbjct: 311 VRSDTAGLLVVATERLLALQNILGPLESLHSLSGADLVGTRYTHLFHSKTSSLPRPTVFA 370
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFL-LALAEKIP--VLNLITNQGKYSP--------DAG 333
+ V + GTGLVH APAHG +D+ + +A +P + I + G+++ D
Sbjct: 371 SNHVLPTSGTGLVHSAPAHGYEDYQGMTVAGVLPKELRCPIDDDGRFTAAVTRETDKDDV 430
Query: 334 PGLEGLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
L G +LG G ++ L+ E +L E +H YPYDW+T +P+I++A+ QWF D E
Sbjct: 431 ARLIGQEVLGAGIGTMIDLLRSEGSLLAEEVIEHRYPYDWKTNQPIIVRATPQWFADVES 490
Query: 392 IKPEAL 397
IK EA+
Sbjct: 491 IKDEAV 496
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 1123 LEGLNILGEGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
L G +LG G ++ L+ E +L E +H YPYDW+T +P+I++A+ QWF D E IK
Sbjct: 433 LIGQEVLGAGIGTMIDLLRSEGSLLAEEVIEHRYPYDWKTNQPIIVRATPQWFADVESIK 492
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 1239
EA+ LE V+FVP ++ L I R WCISRQR WGVPIP Y + I++E +
Sbjct: 493 DEAVKALEEVHFVPPQSRNRLEAFIVSRSEWCISRQRSWGVPIPALYTETGEPIIDEDTM 552
Query: 1240 KHFCTLIDEHGPDFWWSLPVEQLL 1263
H +++ E G D WW+ P E +
Sbjct: 553 THIISVLQEKGTDHWWTGPAEDFI 576
>gi|325294834|ref|YP_004281348.1| isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065282|gb|ADY73289.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 931
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 221/657 (33%), Positives = 346/657 (52%), Gaps = 72/657 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
TALAE+E+EY D +S SIY+ K+ N +L E + + +IWTTTPW+LPAN +A
Sbjct: 195 TALAEAEIEY-ADEVSPSIYVAFKIINDKGINLPE---NTYLVIWTTTPWTLPANVAVAV 250
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
NP LEY V + + I+AK L+E+ + + V F G L+ I Y HP +
Sbjct: 251 NPELEYVVLNSGEKHFIIAKSLLEDFREKTDLLGETVKTFKGIELEGIKYEHPFIDREGQ 310
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
+ L A +V++ GTGLVH AP HG++D+ + L +PVL + + GK++ +A L+GL
Sbjct: 311 VTL--ADYVAADTGTGLVHIAPGHGEEDYQVGLKYNLPVLVPVDDYGKFTDEAPSWLKGL 368
Query: 597 NILGDGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE--- 652
I + L E +L+ HSYP+ WR K VI +A+ QWFI ++ P
Sbjct: 369 KIWEANPVIIKRLKEIGALLFAGEINHSYPHCWRCKGKVIFRATPQWFIVMDKGNPTLRE 428
Query: 653 -ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTIIVNEAN 708
AL +++V ++PE K +++ + RP WCISRQR+WGVPI FY G+TI E
Sbjct: 429 VALKEIDKVQWIPEWGKTRIKNMVEGRPDWCISRQRIWGVPIVAFYCEECGETIYSKEI- 487
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVL 763
+ + ++ D W+ ++LL K DILD+WFDSG S + VL
Sbjct: 488 ADYVANIFEKESADAWYKREAKELLPEGFKCPKCGGEKFKKEMDILDVWFDSGSSHAAVL 547
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF +SLL S + AP+++V HGF +DEKG KMSKS
Sbjct: 548 ERRPELSWPADMYLEGSDQHRGWFQASLLESCGTRKEAPYKSVLTHGFTLDEKGHKMSKS 607
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNV++ D+ + +G D+LR WVA+ +
Sbjct: 608 LGNVVAPEDVVK-----------------------------KFGADILRLWVASENFTE- 637
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS---RYVDVYMLKRLCEFQN 935
V I +NIL + +KIR++ R++LG L + + + +D + + R
Sbjct: 638 DVKISENILKQVAEVYKKIRNTFRFMLGNLSDFTPEESLVYDELEEIDKWAINRFSILAK 697
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +++ + R++ ++ ELS+ Y ++KD LYC++ N + R S ++ I +
Sbjct: 698 EIIDAYNSYKFNKIYRLIYDYCATELSSIYLDILKDTLYCEAPNSKKRKSAQTAIYKILY 757
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGE 1052
L +API+ AEE+YS++P R+ V+L+ + L+C+S +GE
Sbjct: 758 GLTTLIAPILSFTAEEIYSYIPGREKE-------SVFLE------EFPLFCESPDGE 801
Score = 284 bits (726), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/394 (40%), Positives = 233/394 (59%), Gaps = 12/394 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+ E+ +F+LHDGPPYANG HIGHA+NKILKDI ++S +QG + +VPGW
Sbjct: 38 DLYNKLLESHKYDRKFVLHDGPPYANGHIHIGHALNKILKDIVVKSKSMQGYQTPFVPGW 97
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
DCHGLPIE + + + + P+D+RKK + +A +N Q+ EF GV+ DW+ N Y
Sbjct: 98 DCHGLPIERAVFQKLKKRKDEVDPIDVRKKCREYATNWVNIQREEFIRLGVIGDWK-NPY 156
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D +Y + + + Y++ ++R KPVYW P+ TALAE+E+EY D VS SIY+
Sbjct: 157 ITMDPKYQADIVRELGKFYERGLVHRAKKPVYWCPNCVTALAEAEIEY-ADEVSPSIYVA 215
Query: 183 IK-LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
K +N +L E + + +IWTTTPW+LPAN +A NP LEY V + + I+AK L
Sbjct: 216 FKIINDKGINLPE---NTYLVIWTTTPWTLPANVAVAVNPELEYVVLNSGEKHFIIAKSL 272
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
+E + E V F G L+ I Y HP + + L A +V++ GTGLVH AP
Sbjct: 273 LEDFREKTDLLGETVKTFKGIELEGIKYEHPFIDREGQVTL--ADYVAADTGTGLVHIAP 330
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE-PDVLWT 360
HG++D+ + L +PVL + + GK++ +A L+GL I + L E +L+
Sbjct: 331 GHGEEDYQVGLKYNLPVLVPVDDYGKFTDEAPSWLKGLKIWEANPVIIKRLKEIGALLFA 390
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 394
HSYP+ WR K VI +A+ QWFI ++ P
Sbjct: 391 GEINHSYPHCWRCKGKVIFRATPQWFIVMDKGNP 424
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILK 1167
+ + GK++ +A L+GL I + L E +L+ HSYP+ WR K VI +
Sbjct: 351 VDDYGKFTDEAPSWLKGLKIWEANPVIIKRLKEIGALLFAGEINHSYPHCWRCKGKVIFR 410
Query: 1168 ASQQWFIDTERIKPE----ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
A+ QWFI ++ P AL ++ V ++PE K +++ + RP WCISRQR+WGVPI
Sbjct: 411 ATPQWFIVMDKGNPTLREVALKEIDKVQWIPEWGKTRIKNMVEGRPDWCISRQRIWGVPI 470
Query: 1224 PVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY G+TI E + + ++ D W+ ++LL
Sbjct: 471 VAFYCEECGETIYSKEI-ADYVANIFEKESADAWYKREAKELL 512
>gi|320581330|gb|EFW95551.1| Mitochondrial isoleucyl-tRNA synthetase [Ogataea parapolymorpha DL-1]
Length = 990
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 236/663 (35%), Positives = 333/663 (50%), Gaps = 72/663 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
TALAE ELEY P+H S ++Y+K L P G ++ALIWT+TPW+L AN+ I+
Sbjct: 229 ATALAEGELEYNPEHRSTAVYVKFPLEHPPEAF--GPQPVYALIWTSTPWTLAANRAISV 286
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWT----FQTDIDVVCDFPGQYLQDITYIHPI-- 530
N + Y++ KG +IVA+ LV +L+ +TDI + PG L Y + +
Sbjct: 287 NENMAYTIVESKGDRLIVAQKLVNSLRTIDPELRETDIQI----PGSELLGCRYRNLLLV 342
Query: 531 -NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS--- 586
+ L +L V+ S GTGLVH AP HGQDD+ + L I + + GKY+
Sbjct: 343 GGSQDTSLPILHGDHVTDSAGTGLVHTAPGHGQDDYFVCLKHSIQPYSPVNEHGKYTDEL 402
Query: 587 PDAG-PGLEGLNILGDGKDQVLHLVEPDVL---WTENYQHSYPYDWRTKKPVILKASQQW 642
PD L GL +LG+G +++ +E L NY HSYPYDWR+KKP+I++++ QW
Sbjct: 403 PDNDLQELVGLRVLGEGTQKMVAKLEKLRLCYHLDPNYTHSYPYDWRSKKPIIIRSTPQW 462
Query: 643 FIDTERIKPEALACLEE-VNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
FID +IK L++ V F P L I R WCISRQR WGVPIPV Y T
Sbjct: 463 FIDVGKIKAVTTELLQKNVQFFPPRGSNRLVSFINLRNEWCISRQRSWGVPIPVVYHKQT 522
Query: 702 --IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN---VTKSNDILDIWFDSG 756
++N+ I+ +I + W+ S + S+ N N + D +D+WFDSG
Sbjct: 523 GEPLINDLVIERISQVIAAEDVESWFGESPMEKWIPSECNVNPDDYVRGTDTMDVWFDSG 582
Query: 757 ISWS--------------HVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTA-----P 797
SW+ V + A VY+EG DQ GWF SS+LT + P
Sbjct: 583 SSWTLVEQFLESTGLLPQAVARGYLADVYLEGSDQHRGWFQSSVLTKIGATAPGEPAVLP 642
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
+ + HGF +DEKG KMSKS+GN I DI +G K AKK
Sbjct: 643 YGKIITHGFTLDEKGDKMSKSLGNTIVPVDIVEGNK---------------------AKK 681
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS 917
+P G+D LR WV A A + +G ILN D V+K+R + R+LLG + + ++
Sbjct: 682 VPGLGIDGLRLWV-AQADYTSDMAVGPVILNRVADVVKKLRFTFRFLLGNIGDMEQTVDY 740
Query: 918 IS-RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
+D Y+L RL F+ Y Y++ + + V +LS+ YF + KD LY D
Sbjct: 741 AQLDAMDRYILSRLASFEKKARQCYEAHNYSKIIKDMNQLVNVDLSSLYFDIRKDPLYTD 800
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS--RQGTFSSFCH--FKVY 1032
+ R S + VL +APIMP +A+E ++H P G SSF ++V
Sbjct: 801 FADSLKRRSTQTVFVEVLKVLTSVLAPIMPIMAQEAWNHSPELVTDGLRSSFMRGWYEVP 860
Query: 1033 LQY 1035
QY
Sbjct: 861 QQY 863
Score = 312 bits (799), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 247/435 (56%), Gaps = 53/435 (12%)
Query: 5 SELYSW--QREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
+ELY W +RE + + FILHDGPPYANG HIGHA+NKILKDI +R LL GK+VHY
Sbjct: 43 TELYDWNNRREVKSIQELFILHDGPPYANGDLHIGHALNKILKDIIVRFELLSGKKVHYR 102
Query: 63 PGWDCHGLPIELKAITS------------KDKLLS------------------PLDIRKK 92
PGWDCHGLPIELKA+ K KL + PL+I +
Sbjct: 103 PGWDCHGLPIELKALEQIAQHKKTRKKEIKRKLKTSPNPELEAELAALEARLKPLEIIEL 162
Query: 93 AKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKP 152
K AL T +Q A+F+ G++ D+ N Y T DK +V QL F L+ + I R KP
Sbjct: 163 CKQHALSTQQSQSAQFQRMGIMGDFA-NPYRTLDKNFVARQLRVFKRLFDNNLIKRQEKP 221
Query: 153 VYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLP 212
VYW + TALAE ELEY P+H S ++Y+K L P G ++ALIWT+TPW+L
Sbjct: 222 VYWGCENATALAEGELEYNPEHRSTAVYVKFPLEHPPEAF--GPQPVYALIWTSTPWTLA 279
Query: 213 ANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWT----FQTDIEVVCDFPGQYLQDIT 268
AN+ I+ N + Y++ KG +IVA+ LV SL+ +TDI++ PG L
Sbjct: 280 ANRAISVNENMAYTIVESKGDRLIVAQKLVNSLRTIDPELRETDIQI----PGSELLGCR 335
Query: 269 YIHPI---NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 325
Y + + + L +L V+ S GTGLVH AP HGQDD+ + L I + +
Sbjct: 336 YRNLLLVGGSQDTSLPILHGDHVTDSAGTGLVHTAPGHGQDDYFVCLKHSIQPYSPVNEH 395
Query: 326 GKYS---PDAG-PGLEGLNILGDGKDQVLHLVEPDVL---WTENYQHSYPYDWRTKKPVI 378
GKY+ PD L GL +LG+G +++ +E L NY HSYPYDWR+KKP+I
Sbjct: 396 GKYTDELPDNDLQELVGLRVLGEGTQKMVAKLEKLRLCYHLDPNYTHSYPYDWRSKKPII 455
Query: 379 LKASQQWFIDTERIK 393
++++ QWFID +IK
Sbjct: 456 IRSTPQWFIDVGKIK 470
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 93/174 (53%), Gaps = 12/174 (6%)
Query: 1109 ITNQGKYS---PDAG-PGLEGLNILGEGKDQVLHLVEPDVL---WTENYQHSYPYDWRTK 1161
+ GKY+ PD L GL +LGEG +++ +E L NY HSYPYDWR+K
Sbjct: 392 VNEHGKYTDELPDNDLQELVGLRVLGEGTQKMVAKLEKLRLCYHLDPNYTHSYPYDWRSK 451
Query: 1162 KPVILKASQQWFIDTERIKPEALACLE-GVNFVPESAKKSLRDQIAQRPYWCISRQRVWG 1220
KP+I++++ QWFID +IK L+ V F P L I R WCISRQR WG
Sbjct: 452 KPIIIRSTPQWFIDVGKIKAVTTELLQKNVQFFPPRGSNRLVSFINLRNEWCISRQRSWG 511
Query: 1221 VPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS-LPVEQLLNTSDVNSN 1271
VPIPV Y T ++N+ I+ +I + W+ P+E+ + S+ N N
Sbjct: 512 VPIPVVYHKQTGEPLINDLVIERISQVIAAEDVESWFGESPMEKWI-PSECNVN 564
>gi|217963834|ref|YP_002349512.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|386008785|ref|YP_005927063.1| ileS [Listeria monocytogenes L99]
gi|386027394|ref|YP_005948170.1| isoleucyl-tRNA synthetase [Listeria monocytogenes M7]
gi|254782418|sp|B8DBR2.1|SYI_LISMH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|217333104|gb|ACK38898.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|307571595|emb|CAR84774.1| ileS [Listeria monocytogenes L99]
gi|336023975|gb|AEH93112.1| isoleucyl-tRNA synthetase [Listeria monocytogenes M7]
Length = 921
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T ++S R VD YM+ +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYENLREVDKYMMIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 224/400 (56%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+P +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|239636330|ref|ZP_04677332.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
gi|239597685|gb|EEQ80180.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
Length = 916
Score = 358 bits (918), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 218/620 (35%), Positives = 323/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDDKGVV---DKDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G I+A+ L E + + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGKKYIIAQALAETVAEALEWDQDTIQLEKEFTGKELEYVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RTSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L N+ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ F + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ + LL + N TK NDI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEQHGSNIWFEKEAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ TSVA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTSVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG + + + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 230/398 (57%), Gaps = 18/398 (4%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G +ILHDGPPYANG+ H+GHA+NKI+KD +R +QG YVPGWD
Sbjct: 37 YQKALEKNKGNASYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FALE I QK +F+ GV D+ ++ Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSTAEFREKCKEFALEQIEIQKKDFKRLGVRGDF-NDPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LKPEYEAAQIRLFGEMAEKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFD 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ + D +IWTTTPW++P+N I +P L+Y +V G I+A+ L E+
Sbjct: 214 VKDDKGVV---DKDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGKKYIIAQALAET 270
Query: 245 ----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L+W Q I++ +F G+ L+ + HP R ++ V++ GTG VH A
Sbjct: 271 VAEALEWD-QDTIQLEKEFTGKELEYVEAQHPF--LDRTSLVINGEHVTTDAGTGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 328 PGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLTEKDALLK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N+ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 387 LNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L N+ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E F + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEQHGSNIWFEKEAKDLL 504
>gi|46908248|ref|YP_014637.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224616|ref|YP_002758723.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254825490|ref|ZP_05230491.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|254854377|ref|ZP_05243725.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|254931813|ref|ZP_05265172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|254993251|ref|ZP_05275441.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
gi|255521953|ref|ZP_05389190.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
gi|300763676|ref|ZP_07073673.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
gi|386732756|ref|YP_006206252.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
gi|404281624|ref|YP_006682522.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
gi|404287442|ref|YP_006694028.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405750366|ref|YP_006673832.1| isoleucyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
gi|405753239|ref|YP_006676704.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
gi|405756172|ref|YP_006679636.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
gi|406704797|ref|YP_006755151.1| isoleucyl-tRNA synthetase [Listeria monocytogenes L312]
gi|417315656|ref|ZP_12102332.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J1816]
gi|424714889|ref|YP_007015604.1| Isoleucine--tRNA ligase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424823772|ref|ZP_18248785.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
gi|81403188|sp|Q71Y01.1|SYI_LISMF RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|259511508|sp|C1KWW3.1|SYI_LISMC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|46881519|gb|AAT04814.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|225877078|emb|CAS05789.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258607776|gb|EEW20384.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|293583367|gb|EFF95399.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|293594732|gb|EFG02493.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|300515412|gb|EFK42462.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
gi|328466360|gb|EGF37517.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J1816]
gi|332312452|gb|EGJ25547.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
gi|384391514|gb|AFH80584.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
gi|404219566|emb|CBY70930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
gi|404222439|emb|CBY73802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
gi|404225372|emb|CBY76734.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
gi|404228259|emb|CBY49664.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
gi|404246371|emb|CBY04596.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361827|emb|CBY68100.1| isoleucyl-tRNA synthetase [Listeria monocytogenes L312]
gi|424014073|emb|CCO64613.1| Isoleucine--tRNA ligase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 921
Score = 358 bits (918), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 226/618 (36%), Positives = 327/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKKSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNAVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 223/400 (55%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+ +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKKSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|326803764|ref|YP_004321582.1| isoleucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651632|gb|AEA01815.1| isoleucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
Length = 927
Score = 358 bits (918), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 222/618 (35%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SIY K L E D +IWTTTPW+LPA++ IA +
Sbjct: 191 STLAEAEIEYK-DVETPSIYAAFKAKDTKGKLPE---DTEFIIWTTTPWTLPASEAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P +EYS+ +V G + +VA L+E+L FQ D V GQ L+ + HP R+
Sbjct: 247 PQIEYSLVAVNGHHYVVASELLESLAEKFQWADYHVEDRVLGQDLELMKANHPFY--DRE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L L+ V++ GTGLVH AP HG+DD+ + + + VL+ + +QG ++ D GLEG+
Sbjct: 305 LLLILGDHVTTESGTGLVHTAPGHGEDDYYVGVKYGLDVLSPVDDQGCFT-DEAEGLEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+G D V+ + + +L E + HSYP+DWRTKKPVI +A QWF ++I+ + L
Sbjct: 364 -FYEEGNDLVIDKMTKNGTLLKVEYFVHSYPHDWRTKKPVIFRALPQWFCSVDKIREKTL 422
Query: 655 ACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
+ EV + S + + + I R W ISRQRVWGVP+P+FY D T I++E I H
Sbjct: 423 DVINNEVTWWHPSGQHRIYNMIRDRGDWVISRQRVWGVPLPIFYAEDGTPIISEETIDHV 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L +EHG + W+ + LL N N TK NDI+D+WFDSG SW+ VL+ +
Sbjct: 483 AKLFEEHGSNIWFEKEAKDLLPEGYENEHSPNGQFTKENDIMDVWFDSGSSWAGVLQTRD 542
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SSLLTSVA+ AP++ V GFV D +G KMSKS+GN
Sbjct: 543 ELSYPADMYLEGSDQYRGWFNSSLLTSVAVNDHAPYKEVVSQGFVNDGEGRKMSKSLGNT 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+S +D+ G D+LR WVA+ S+ V I
Sbjct: 603 VSPNDVCD-----------------------------QRGADILRLWVASVDSR-YDVRI 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
+IL + +KIR++LR+ LG L + ++ +D Y+L L E + +
Sbjct: 633 SDDILGQVAESYRKIRNTLRFTLGNLFDFDAKENYVAYDDLDSIDQYILVLLNELVDHVI 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + ++NF+ +S+FY KD Y + R + ++ + +
Sbjct: 693 DYYNHYDFNSIYQEIINFLTQVMSSFYLDYSKDVTYILLADDPKRRNMQTVMYEVLKKMT 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ PI+PH EE++S++
Sbjct: 753 ILLTPIIPHTTEEIWSYM 770
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/383 (43%), Positives = 236/383 (61%), Gaps = 16/383 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
F+LHDGPPYANG HIGHA+NKI KDI +RS +QG YVPGWD HGLPIE +A+T+
Sbjct: 50 FVLHDGPPYANGNIHIGHALNKITKDIIVRSKNMQGYYSPYVPGWDTHGLPIE-QAVTNS 108
Query: 81 D---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
K +S + R+ +++A + I++Q+ +F+ G DWE + Y T+ K++ ++ F
Sbjct: 109 GVDRKSMSTAEFRQICQDYASQQIDSQRQDFKRLGGQGDWE-DPYITYTKKFEAQEIRVF 167
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGAT 197
+ K+ IYR KPVYWSPSS + LAE+E+EYK D + SIY K L E
Sbjct: 168 GEMAKKGLIYRGNKPVYWSPSSESTLAEAEIEYK-DVETPSIYAAFKAKDTKGKLPE--- 223
Query: 198 DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQ-TDIEVV 256
D +IWTTTPW+LPA++ IA +P +EYS+ +V G + +VA L+ESL FQ D V
Sbjct: 224 DTEFIIWTTTPWTLPASEAIAVHPQIEYSLVAVNGHHYVVASELLESLAEKFQWADYHVE 283
Query: 257 CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI 316
GQ L+ + HP R+L L+ V++ GTGLVH AP HG+DD+ + + +
Sbjct: 284 DRVLGQDLELMKANHPFY--DRELLLILGDHVTTESGTGLVHTAPGHGEDDYYVGVKYGL 341
Query: 317 PVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTK 374
VL+ + +QG ++ D GLEG+ +G D V+ + + +L E + HSYP+DWRTK
Sbjct: 342 DVLSPVDDQGCFT-DEAEGLEGI-FYEEGNDLVIDKMTKNGTLLKVEYFVHSYPHDWRTK 399
Query: 375 KPVILKASQQWFIDTERIKPEAL 397
KPVI +A QWF ++I+ + L
Sbjct: 400 KPVIFRALPQWFCSVDKIREKTL 422
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 99/180 (55%), Gaps = 11/180 (6%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + +QG ++ D GLEG+ EG D V+ + + +L E + HSYP+DWRTKKP
Sbjct: 344 LSPVDDQGCFT-DEAEGLEGI-FYEEGNDLVIDKMTKNGTLLKVEYFVHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
VI +A QWF ++I+ + L + V + S + + + I R W ISRQRVWGVP
Sbjct: 402 VIFRALPQWFCSVDKIREKTLDVINNEVTWWHPSGQHRIYNMIRDRGDWVISRQRVWGVP 461
Query: 1223 IPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL-----NTSDVNSNVTKSN 1276
+P+FY D T I++E I H L +EHG + W+ + LL N N TK N
Sbjct: 462 LPIFYAEDGTPIISEETIDHVAKLFEEHGSNIWFEKEAKDLLPEGYENEHSPNGQFTKEN 521
>gi|387898119|ref|YP_006328415.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens Y2]
gi|387172229|gb|AFJ61690.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens Y2]
Length = 923
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 194 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 249
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVE++ D +V G+ L++I HP+ RD
Sbjct: 250 PDLEYSVIAVGEDRFVVASALVESVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 307
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 308 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 366
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 367 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 426
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 427 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 485
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 486 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 545
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 546 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 605
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 606 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 635
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +K+R++ R+L G L + + S ++ R VD YML +L + + +
Sbjct: 636 DAILKQVAEVYRKVRNTFRFLHGNLFDFNPSVNAVDVKDLREVDQYMLIKLNKLIDKVKK 695
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 696 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALVK 755
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 756 LTAPILPHTADEMWSHL 772
Score = 280 bits (715), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 37 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 96
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 97 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 156 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 214
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 215 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 271
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES+ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 272 ESVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 330 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 388
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 389 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 425
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 360 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 419
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 420 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 479
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 480 -TIEHVSELFRQHGSNIWFEKEAKDLL 505
>gi|445059887|ref|YP_007385291.1| isoleucyl-tRNA ligase [Staphylococcus warneri SG1]
gi|443425944|gb|AGC90847.1| isoleucyl-tRNA ligase [Staphylococcus warneri SG1]
Length = 916
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 218/620 (35%), Positives = 323/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDDKGVV---DKDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G I+A+ L E + + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGKKYIIAQALAETVAEALEWDQDTIQLEKEFTGKELEYVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RTSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L N+ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ F + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ + LL + N TK NDI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEQHGSNIWFEKEAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ TSVA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTSVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG + + + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 230/398 (57%), Gaps = 18/398 (4%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G +ILHDGPPYANG+ H+GHA+NKI+KD +R +QG YVPGWD
Sbjct: 37 YEKALEKNKGNASYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FALE I QK +F+ GV D+ ++ Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSTAEFREKCKEFALEQIEIQKKDFKRLGVRGDF-NDPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LKPEYEAAQIRLFGEMAEKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFD 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ + D +IWTTTPW++P+N I +P L+Y +V G I+A+ L E+
Sbjct: 214 VKDDKGVV---DKDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGKKYIIAQALAET 270
Query: 245 ----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L+W Q I++ +F G+ L+ + HP R ++ V++ GTG VH A
Sbjct: 271 VAEALEWD-QDTIQLEKEFTGKELEYVEAQHPF--LDRTSLVINGEHVTTDAGTGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 328 PGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLTEKDALLK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N+ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 387 LNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L N+ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E F + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEQHGSNIWFEKEAKDLL 504
>gi|154685959|ref|YP_001421120.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
gi|384265124|ref|YP_005420831.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|429505094|ref|YP_007186278.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|154351810|gb|ABS73889.1| IleS [Bacillus amyloliquefaciens FZB42]
gi|380498477|emb|CCG49515.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|429486684|gb|AFZ90608.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 921
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVE++ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGEDRFVVASALVESVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +K+R++ R+L G L + + S ++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKVRNTFRFLHGNLFDFNPSVNAVDVKDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LTAPILPHTADEMWSHL 770
Score = 279 bits (714), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES+ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ESVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|284802465|ref|YP_003414330.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284995607|ref|YP_003417375.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
gi|284058027|gb|ADB68968.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284061074|gb|ADB72013.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
Length = 921
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKTSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + +L + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATADAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T ++S R VD YM+ +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYKNLREVDKYMMIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/399 (40%), Positives = 223/399 (55%), Gaps = 14/399 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAERPTYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE K K +S + RK +A++ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIETAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 154 TLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKTSASIFVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 213 KVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALLP 269
Query: 244 SL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
SL K F+ D VV G L + HP RD ++ ++ GTG VH AP
Sbjct: 270 SLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATADAGTGAVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDFL+ + +L + ++G ++ +A PG EG+ K L E L
Sbjct: 327 GHGEDDFLIGKKYDLEILAPLDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKM 385
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 386 EFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|47093189|ref|ZP_00230963.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
gi|47018440|gb|EAL09199.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
H7858]
Length = 921
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 226/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ L EG + +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKKSASIFVAFKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D VV G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLPSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + + G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDHGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
A ++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 AAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TINHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ AP+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ + +T ++S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNAVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYEAVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 260 bits (664), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 222/400 (55%), Gaps = 16/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+ +ILHDGPPYANG H+GHA+NK +KDI +R + G YVPGW
Sbjct: 35 KLYEKIQEKNAGRKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKKSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ L EG + +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKGVLDEGT---NIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D VV G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DATVVKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + + G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDHGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAA 424
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ + G ++ +A PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDHGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + LA ++GVN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TINHISELFREHGSNVWFERDVKDLL 502
>gi|452855490|ref|YP_007497173.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079750|emb|CCP21507.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 921
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 326/617 (52%), Gaps = 56/617 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L G +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV +V +VA LVE++ D +V G+ L++I HP+ RD
Sbjct: 248 PDLEYSVIAVGEDRFVVASALVESVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF++ + VL + +G + +A PG EG+
Sbjct: 306 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E I+H
Sbjct: 425 AIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE-TIEHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +HG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ELFRQHGSNIWFEKEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDD 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 544 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WV++ V +
Sbjct: 604 -----------VPA------------------KVMKQLGADILRLWVSS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +K+R++ R+L G L + + S ++ R VD YML +L + + +
Sbjct: 634 DAILKQVAEVYRKVRNTFRFLHGNLFDFNPSVNAVDVKDLREVDQYMLIKLNKLIDKVKK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+++A + NF ELS+FY KD +Y + + R S + L++
Sbjct: 694 AYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALVK 753
Query: 1000 TVAPIMPHLAEEVYSHL 1016
API+PH A+E++SHL
Sbjct: 754 LTAPILPHTADEMWSHL 770
Score = 279 bits (714), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 223/397 (56%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E +P+F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 DIYRLVQERTKDRPKFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S + RK + +A + I Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ LKPV WSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 VTLKPEYEAQQIRVFGKMAKRGYIYKGLKPVNWSPSSESALAEAEIEYQ-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L G +IWTTTPW++PAN I+ +P LEYSV +V +VA LV
Sbjct: 213 FGVKDGKGVLENGE---RIIIWTTTPWTIPANLGISVHPDLEYSVIAVGEDRFVVASALV 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES+ D EV G+ L++I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 ESVASACGFDQYEVTRTVKGKDLENIIAEHPLYG--RDSLVMLGEHVTTDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DDF++ + VL + +G + +A PG EG+ K L E L
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKL 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLL 423
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 1120 GPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
PG EG+ K L E L E HSYP+DWRTKKP I +A+ QWF +
Sbjct: 358 APGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTIFRATAQWFASIKD 417
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 1236
+ + L ++ +VPE ++ L + + R WCISRQR WGVPIPVFY +G+ II +E
Sbjct: 418 FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCISRQRAWGVPIPVFYAENGEPIITDE 477
Query: 1237 ANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I+H L +HG + W+ + LL
Sbjct: 478 -TIEHVSELFRQHGSNIWFEKEAKDLL 503
>gi|336113716|ref|YP_004568483.1| isoleucyl-tRNA synthetase [Bacillus coagulans 2-6]
gi|335367146|gb|AEH53097.1| isoleucyl-tRNA synthetase [Bacillus coagulans 2-6]
Length = 922
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 220/624 (35%), Positives = 326/624 (52%), Gaps = 66/624 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALA++E+EYK D S SIY+ + L TD +IWTTTPW++P+N IA N
Sbjct: 191 SALADAEIEYK-DIKSPSIYVAFDVKDGKGVL---DTDTKIVIWTTTPWTIPSNLGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P + Y V G +VA+ L+E + + + +VV PG+ L+ I HP+ RD
Sbjct: 247 PEINYVVVKTGGNKYLVAEALLEEVSSVLEWENAEVVQTVPGKKLEYIVAKHPLYG--RD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH +P HG+DDFL+ + V+ + ++G + DA PG EGL
Sbjct: 305 SLVMLGDHVTTDSGTGCVHTSPGHGEDDFLIGKKYGLDVICAVDDKGMMTKDA-PGFEGL 363
Query: 597 ------NILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
+ + DQ L++ L HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 364 FYDKANKPICEALDQAGALLKLKFL-----THSYPHDWRTKKPVIFRATSQWFASVDMFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
+ L +EEVN+ P + + + I R WCISRQR WGVPIPVFY +G+ II E
Sbjct: 419 DDILKAVEEVNWTPVWGELRMHNMIRDRGDWCISRQRAWGVPIPVFYAENGEAIITEE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG + W+ + LL + + N K DI+D+WFDSG S VL
Sbjct: 478 IQHVSDLFREHGSNVWFEREAKDLLPEGFTHPASPNGVFKKETDIMDVWFDSGSSHQGVL 537
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+PA +Y+EG DQ GWF SSL+TSVA+ AP+ V HGFV+D +G KMSKS
Sbjct: 538 AAQEGLKRPADLYLEGSDQYRGWFNSSLITSVAVTGRAPYDGVLSHGFVLDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I LP K + G D++R WVA+
Sbjct: 598 LGNTI-----------LPG------------------KVVEQLGADIIRLWVAS-VDYQA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + IL + +KIR++ R++LG L++ + ++ R VD +ML +L +
Sbjct: 628 DVRVSNEILKQVSEVYRKIRNTFRFMLGNLNDFDPARHQVAYEELREVDRFMLVKLNKLV 687
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y +++A + NF +LS+FY KD LY + + R + L+
Sbjct: 688 KEVREAYERYEFATIYHAVNNFCATDLSSFYMDFAKDVLYIELADNPERRAMQTVLYECL 747
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPS 1018
L + ++PI+PH A+EV+ ++P
Sbjct: 748 VALTKLLSPILPHTADEVWQYIPG 771
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/402 (40%), Positives = 228/402 (56%), Gaps = 24/402 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y + G+P F+LHDGPPYANG H+GHA+NK LKDI R + G YVPGW
Sbjct: 35 DIYQKVMKRTEGRPLFVLHDGPPYANGDLHMGHALNKTLKDIINRFKSMTGYHAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE + +T K K +S + RK + +A E I+ Q+ F+ GV DWE N Y
Sbjct: 95 DTHGLPIE-QELTKKGVDRKSMSVAEFRKLCEKYAHEQIDRQRTAFKRLGVRGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T Y Q+ F + K+ YIY+ LKPVYWSPSS +ALA++E+EYK D S SIY+
Sbjct: 153 LTLRPAYEAEQIKVFGEMAKKGYIYKGLKPVYWSPSSESALADAEIEYK-DIKSPSIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L TD +IWTTTPW++P+N IA NP + Y V G +VA+ L+
Sbjct: 212 FDVKDGKGVL---DTDTKIVIWTTTPWTIPSNLGIAVNPEINYVVVKTGGNKYLVAEALL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E + + + EVV PG+ L+ I HP+ RD ++ V++ GTG VH +P
Sbjct: 269 EEVSSVLEWENAEVVQTVPGKKLEYIVAKHPLYG--RDSLVMLGDHVTTDSGTGCVHTSP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL------NILGDGKDQVLHLVEP 355
HG+DDFL+ + V+ + ++G + DA PG EGL + + DQ L++
Sbjct: 327 GHGEDDFLIGKKYGLDVICAVDDKGMMTKDA-PGFEGLFYDKANKPICEALDQAGALLKL 385
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 386 KFL-----THSYPHDWRTKKPVIFRATSQWFASVDMFRDDIL 422
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 90/163 (55%), Gaps = 15/163 (9%)
Query: 1109 ITNQGKYSPDAGPGLEGL------NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKK 1162
+ ++G + DA PG EGL + E DQ L++ L HSYP+DWRTKK
Sbjct: 347 VDDKGMMTKDA-PGFEGLFYDKANKPICEALDQAGALLKLKFL-----THSYPHDWRTKK 400
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI +A+ QWF + + + L +E VN+ P + + + I R WCISRQR WGVP
Sbjct: 401 PVIFRATSQWFASVDMFRDDILKAVEEVNWTPVWGELRMHNMIRDRGDWCISRQRAWGVP 460
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IPVFY +G+ II E I+H L EHG + W+ + LL
Sbjct: 461 IPVFYAENGEAIITEE-TIQHVSDLFREHGSNVWFEREAKDLL 502
>gi|225556374|gb|EEH04663.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 1505
Score = 357 bits (916), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 227/640 (35%), Positives = 326/640 (50%), Gaps = 55/640 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQF 473
TALAE+ELEYK DH S + +K L +P+ L + T++ A+IWTTTPW+LPAN
Sbjct: 700 TALAEAELEYKEDHKSTAGLVKFPLVSMPSKLRDMLPSNTTEISAVIWTTTPWTLPANAA 759
Query: 474 IAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFP---GQYLQDITYIHP 529
IA +P LEYS V S K ++V E ++ Q + V P + + + TY+
Sbjct: 760 IAVSPTLEYSIVKSEKHGYLVVGSSRREYIQTLLQGEEVTVIGSPILGCELVSESTYLPL 819
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
++ A FV++ G+GLVHCAP HG +D+ + A I + + G ++ A
Sbjct: 820 FKDGSVPQPVIAADFVTADSGSGLVHCAPGHGMEDYEVCQAHGIASHTPVDDAGLFTDAA 879
Query: 590 GP----GLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
P L G ++LGDG +VL VE +L Y+H YPYDWR+K PVI++A++QWF
Sbjct: 880 MPLNPSMLSGKSVLGDGNREVLRYVESKGQLLAKHTYEHKYPYDWRSKLPVIVRATEQWF 939
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-- 701
D I+ AL LE+V F+P K L I R WCISRQR WGVPIP Y +T
Sbjct: 940 ADVSDIRDYALRALEDVQFMPSMGKSRLESFIKSRSEWCISRQRAWGVPIPALYHRETGE 999
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLS------VEQLLNTSDVNSNVTKSNDILDIWFDS 755
I+ + ++ H +IDE G D WW+ + + + + + D +D+WFDS
Sbjct: 1000 AILTKESVSHILKVIDERGIDAWWTDDENDPTWIAASIRETSSGAAYKRGTDTMDVWFDS 1059
Query: 756 GISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK---------HTAPFRNV 801
G SW+ V ++ A VY+EG DQ GWF SSLLT VA APF+ +
Sbjct: 1060 GSSWTQVKTPASVEGYAADVYLEGTDQHRGWFQSSLLTYVAYNLGLGEKTGISRAPFKTL 1119
Query: 802 FLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY 861
HGF +D+ KMSKS+GNVIS I G P K + + A A
Sbjct: 1120 ITHGFTLDKDSRKMSKSIGNVISPDQILDGTLLPPLKLKR----MKGQEKKPTAPVFDAL 1175
Query: 862 GVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---S 917
G D LR WVA+ +KD + I + +L + ++ K R + + LLG L + S
Sbjct: 1176 GTDALRLWVASSDYTKD--IVISQPVLKTVHTNLHKYRVTFKLLLGSLQDFDPSCTVPHE 1233
Query: 918 ISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDS 977
R +D L +L + N Y F++ RA + + + SAFY +KDRL
Sbjct: 1234 SLRIIDKIALLQLRKLINICQDAYSSFEFYRAITAINKWANLDFSAFYIESLKDRL---- 1289
Query: 978 INGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
R + TL +I++ +AP++P+L EE + H P
Sbjct: 1290 -----RRAAQTTLCHIYYHFQNLLAPLVPNLVEESWEHTP 1324
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/417 (43%), Positives = 243/417 (58%), Gaps = 27/417 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LYSWQ+ + F+LHDGPPYANG H+GHA+NKILKDI R L GKRVHYVPGW
Sbjct: 536 DLYSWQQRHRPNENRFVLHDGPPYANGDLHVGHALNKILKDIICRVQLAAGKRVHYVPGW 595
Query: 66 DCHGLPIELKAITSKDKLLSPLDIRKKAKN-----------FALETINTQKAEFESWGVL 114
DCHGLPIELKA+ ++ K L L+ + A +T+ Q F W V+
Sbjct: 596 DCHGLPIELKALQTQ-KGLGRLEAGRNGNGGAAAIRRAARQLAEKTVLEQMKGFHKWAVM 654
Query: 115 ADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDH 174
ADWE N + T DK + K QL F + ++ I+R KPVYWSPSSRTALAE+ELEYK DH
Sbjct: 655 ADWE-NAWKTMDKSFEKRQLDVFLKMVEKGLIHRRFKPVYWSPSSRTALAEAELEYKEDH 713
Query: 175 VSKSIYLKIKLNQVPAHLLE----GATDLHALIWTTTPWSLPANQFIAFNPALEYS-VAS 229
S + +K L +P+ L + T++ A+IWTTTPW+LPAN IA +P LEYS V S
Sbjct: 714 KSTAGLVKFPLVSMPSKLRDMLPSNTTEISAVIWTTTPWTLPANAAIAVSPTLEYSIVKS 773
Query: 230 VKGANVIVAKCLVESLKWTFQTDIEVVCDFP---GQYLQDITYIHPINKEQRDLKLLPAG 286
K ++V E ++ Q + V P + + + TY+ ++ A
Sbjct: 774 EKHGYLVVGSSRREYIQTLLQGEEVTVIGSPILGCELVSESTYLPLFKDGSVPQPVIAAD 833
Query: 287 FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP----GLEGLNIL 342
FV++ G+GLVHCAP HG +D+ + A I + + G ++ A P L G ++L
Sbjct: 834 FVTADSGSGLVHCAPGHGMEDYEVCQAHGIASHTPVDDAGLFTDAAMPLNPSMLSGKSVL 893
Query: 343 GDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
GDG +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+ AL
Sbjct: 894 GDGNREVLRYVESKGQLLAKHTYEHKYPYDWRSKLPVIVRATEQWFADVSDIRDYAL 950
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 83/138 (60%), Gaps = 4/138 (2%)
Query: 1123 LEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
L G ++LG+G +VL VE +L Y+H YPYDWR+K PVI++A++QWF D I+
Sbjct: 887 LSGKSVLGDGNREVLRYVESKGQLLAKHTYEHKYPYDWRSKLPVIVRATEQWFADVSDIR 946
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 1238
AL LE V F+P K L I R WCISRQR WGVPIP Y +T I+ + +
Sbjct: 947 DYALRALEDVQFMPSMGKSRLESFIKSRSEWCISRQRAWGVPIPALYHRETGEAILTKES 1006
Query: 1239 IKHFCTLIDEHGPDFWWS 1256
+ H +IDE G D WW+
Sbjct: 1007 VSHILKVIDERGIDAWWT 1024
>gi|50307223|ref|XP_453590.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642724|emb|CAH00686.1| KLLA0D11858p [Kluyveromyces lactis]
Length = 990
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 231/642 (35%), Positives = 330/642 (51%), Gaps = 67/642 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAF 476
TALAE ELEYK DHIS + Y+K L + +L + LIWT+TPW+L +N+ I F
Sbjct: 222 TALAEGELEYKEDHISIAAYVKFPLTEESKSVLGFPEAPVSFLIWTSTPWTLLSNRAICF 281
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
N +L+Y + G +IV K L + L F + ++V D G +L + Y +PI K+
Sbjct: 282 NQSLDYVLIKHNGEYMIVEKNLADKLD--FLSGFELVKDLDGNFLSHLKYTNPILKDNVT 339
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-LEG 595
L V+S GTGLVH AP HG +D+++ + + + + + ++G+Y+ + P L
Sbjct: 340 RPLFHGDHVTSVTGTGLVHTAPGHGHEDYIIGIQNFLEIFSPVDHEGRYNVEELPAHLRD 399
Query: 596 LNILGDGKDQ-VLHLVEPD----VLWTEN-------YQHSYPYDWRTKKPVILKASQQWF 643
L GK + VL + VL EN Y HSYPYDWR+KKP+I++A+ QWF
Sbjct: 400 LLKEESGKGRKVLDRTTTEKILSVLKGENMLMHHHEYVHSYPYDWRSKKPIIIRATPQWF 459
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGD 700
D +K AL LE V FVPE L I R WCISRQR WGVPIP + D D
Sbjct: 460 ADLHDVKTLALRALETVKFVPERGINRLSSFIKTRNEWCISRQRYWGVPIPSLHKRDDPD 519
Query: 701 TIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL------NTSDVNSNVTKSNDILDIWFD 754
++++NE I H I+ G + W++ S + D+ + D +D+WFD
Sbjct: 520 SVLMNEETISHIIKTIESKGVNSWFAESTVDSMYQWLPKKYHDIAHEYYRGTDTVDVWFD 579
Query: 755 SGISWSHV-------------LKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT--APFR 799
SG SW+ + L A +Y+EG DQ GWF SSLLT VA AP++
Sbjct: 580 SGSSWNVIADWYKNVAGLQSQLPVPLADIYLEGSDQHRGWFQSSLLTKVASSGMPDAPYK 639
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
NV HGF +DE G KMSKS+GN IS I +G K LP
Sbjct: 640 NVITHGFTLDENGIKMSKSIGNTISPGAIIKGDPK---------------------ANLP 678
Query: 860 AYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS 919
A GVD LR V A ++ V G ++ D ++K R + +++LG L ++S G I
Sbjct: 679 ALGVDGLRLLV-AQSNFTSDVVAGPTVMKHVADALKKFRLTFKFILGNLQ-ETQSHGLIP 736
Query: 920 ----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYC 975
R VD Y L L LY ++ ++ + + N+LSA YF++ KD LY
Sbjct: 737 FSELRRVDQYTLLNLKALSQETKKLYQQYNFSNVLTQVQYHMNNDLSALYFSVTKDSLYS 796
Query: 976 DSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
DS+N + RLS TL +I ++PI+P + +EV+++ P
Sbjct: 797 DSLNNKKRLSIQTTLFHILDTYRSIMSPIIPIMVQEVWNYTP 838
Score = 303 bits (775), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/394 (43%), Positives = 237/394 (60%), Gaps = 20/394 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG H+GHA+NKILKDI R LL GK V Y+PGWDCHGLPIELKA+
Sbjct: 80 FILHDGPPYANGDLHLGHALNKILKDIINRFQLLNGKHVVYIPGWDCHGLPIELKALNKL 139
Query: 80 KDKL--LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
D+L +SP IR A+ A +TI +Q+ +FE +G+L +W+ N Y T D ++ NQL F
Sbjct: 140 NDQLDRISPTKIRSIARAHAQKTIKSQRQQFEQFGILTNWDTN-YVTMDPKFEINQLSVF 198
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE-GA 196
L+++ I R KPVYW ++TALAE ELEYK DH+S + Y+K L + +L
Sbjct: 199 QELFRKKLIKRQRKPVYWGTETKTALAEGELEYKEDHISIAAYVKFPLTEESKSVLGFPE 258
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEVV 256
+ LIWT+TPW+L +N+ I FN +L+Y + G +IV K L + L F + E+V
Sbjct: 259 APVSFLIWTSTPWTLLSNRAICFNQSLDYVLIKHNGEYMIVEKNLADKLD--FLSGFELV 316
Query: 257 CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI 316
D G +L + Y +PI K+ L V+S GTGLVH AP HG +D+++ + +
Sbjct: 317 KDLDGNFLSHLKYTNPILKDNVTRPLFHGDHVTSVTGTGLVHTAPGHGHEDYIIGIQNFL 376
Query: 317 PVLNLITNQGKYSPDAGPG-LEGLNILGDGKDQ-VLHLVEPD----VLWTEN-------Y 363
+ + + ++G+Y+ + P L L GK + VL + VL EN Y
Sbjct: 377 EIFSPVDHEGRYNVEELPAHLRDLLKEESGKGRKVLDRTTTEKILSVLKGENMLMHHHEY 436
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYPYDWR+KKP+I++A+ QWF D +K AL
Sbjct: 437 VHSYPYDWRSKKPIIIRATPQWFADLHDVKTLAL 470
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
Y HSYPYDWR+KKP+I++A+ QWF D +K AL LE V FVPE L I R
Sbjct: 436 YVHSYPYDWRSKKPIIIRATPQWFADLHDVKTLALRALETVKFVPERGINRLSSFIKTRN 495
Query: 1210 YWCISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
WCISRQR WGVPIP + D D++++NE I H I+ G + W++
Sbjct: 496 EWCISRQRYWGVPIPSLHKRDDPDSVLMNEETISHIIKTIESKGVNSWFA 545
>gi|149183948|ref|ZP_01862330.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
gi|148848344|gb|EDL62612.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
Length = 876
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 325/621 (52%), Gaps = 56/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ K+ + L EG +IWTTTPW++PAN I +
Sbjct: 206 SALAEAEIEYQ-DKRSPSIYVGFKVKEGNGVLEEGT---QIIIWTTTPWTIPANLAITVH 261
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
L Y VA V+G +VA+ L+E + + D VV G L+ + HP+ R+
Sbjct: 262 ADLSYVVAEVEGNKYVVAEDLLEEVTSVLEWNDPTVVKTVKGSELEQVKAQHPLY--DRE 319
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DD+L+ + +L + ++G + +A PG EGL
Sbjct: 320 SLVILGDHVTTDSGTGCVHTAPGHGEDDYLVGKKYGLDILCPVNDKGVMTEEA-PGFEGL 378
Query: 597 NILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 379 FYDAANKPITEKLQEAGALLKLEFITHSYPHDWRTKKPVIFRATPQWFASIDAFREDLLQ 438
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+++ +VP + L + + R WCISRQR WGVPIPVFY +G+ II E I H
Sbjct: 439 AVKDTKWVPAWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYAENGEEIITEET-IAHVS 497
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + ++LL + N TK DI+D+WFDSG S VL +
Sbjct: 498 ELFREHGSNIWFEKNAKELLPEGFTHEGSPNGEFTKEQDIMDVWFDSGSSHQSVLHQRDD 557
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T VA+ AP++ V HGFV D +G KMSKS+GN++
Sbjct: 558 LQRPADLYLEGSDQYRGWFNSSLTTGVAVTGKAPYKGVLSHGFVNDGEGRKMSKSIGNIV 617
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ + G D+LR WVA+ V +
Sbjct: 618 VPDKV-----------------------------IKQMGADILRLWVAS-VDYQADVRLS 647
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG L + + +IS R VD +ML +L + ++ T
Sbjct: 648 DAILKQVSEVYRKIRNTYRFLLGNLADFNPEKDAISYDNLREVDQFMLVKLNDLIKSVTT 707
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++++ + NF +LS+FY KD LY ++ + R + LH L +
Sbjct: 708 AYENYEFSSIYTSVNNFCTLDLSSFYLDFAKDVLYIEAEDNFERRAMQTVLHESLLALTK 767
Query: 1000 TVAPIMPHLAEEVYSHLPSRQ 1020
++PI+ H A+EV+SH+ S+Q
Sbjct: 768 LMSPILSHTADEVWSHMSSQQ 788
Score = 283 bits (723), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 230/397 (57%), Gaps = 14/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P FILHDGPPYANG H+GHA+NK+LKD +R + G YVPGW
Sbjct: 50 DIYKKVQERTEGRPLFILHDGPPYANGDLHMGHALNKVLKDFIVRYKSMSGYNAPYVPGW 109
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K ++ + RK + +A I++Q+ +F+ GV DW+ N Y
Sbjct: 110 DTHGLPIE-QALTKKGVNRKEMTVAEFRKLCEEYAYGQIDSQRTQFKQIGVRGDWD-NPY 167
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F ++ + YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 168 ITMKPEYEAEQIKVFGDMANKGYIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSPSIYVG 226
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ + L EG +IWTTTPW++PAN I + L Y VA V+G +VA+ L+
Sbjct: 227 FKVKEGNGVLEEGT---QIIIWTTTPWTIPANLAITVHADLSYVVAEVEGNKYVVAEDLL 283
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E + + D VV G L+ + HP+ R+ ++ V++ GTG VH AP
Sbjct: 284 EEVTSVLEWNDPTVVKTVKGSELEQVKAQHPLY--DRESLVILGDHVTTDSGTGCVHTAP 341
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG+DD+L+ + +L + ++G + +A PG EGL K L E L
Sbjct: 342 GHGEDDYLVGKKYGLDILCPVNDKGVMTEEA-PGFEGLFYDAANKPITEKLQEAGALLKL 400
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 401 EFITHSYPHDWRTKKPVIFRATPQWFASIDAFREDLL 437
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L E L E HSYP+DWRTKKPVI +
Sbjct: 362 VNDKGVMTEEA-PGFEGLFYDAANKPITEKLQEAGALLKLEFITHSYPHDWRTKKPVIFR 420
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 421 ATPQWFASIDAFREDLLQAVKDTKWVPAWGETRLYNMVRDRGDWCISRQRAWGVPIPVFY 480
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II E I H L EHG + W+ ++LL
Sbjct: 481 AENGEEIITEET-IAHVSELFREHGSNIWFEKNAKELL 517
>gi|334133962|ref|ZP_08507497.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF7]
gi|333608470|gb|EGL19767.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF7]
Length = 920
Score = 357 bits (915), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 215/620 (34%), Positives = 334/620 (53%), Gaps = 57/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK + S SIY+ + + L + D +IWTTTPW+LPAN I+ +
Sbjct: 192 SALAEAEIEYK-EKTSPSIYVAFDVAEGQGKLPQ---DAAFVIWTTTPWTLPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y+V V G ++A+ L+E+ K TD +V G L+++T HP R+
Sbjct: 248 PDFTYAVVEVSGKKYVLAEGLLESAAKAIGWTDYSMVSTVKGSELENVTCKHPFY--DRE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG+DDF++ KI VL + +QG ++ +A PGLEG+
Sbjct: 306 SLVMLGEHVTLEAGTGCVHTAPGHGEDDFIVGQKYKIGVLCPVDDQGHFTAEA-PGLEGV 364
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G +L +E +L + H Y +DWRTKKPVI +A++QWF ++ + E L
Sbjct: 365 -FYEKGNKTILEWLENSGHLLHASSINHQYAHDWRTKKPVIYRATEQWFASIDKFRDEML 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++++ + P + L + IA R WCISRQRVWGVPIP+FY + IVN+ I+H
Sbjct: 424 EEIKKIKWTPSWGEIRLHNMIADRGDWCISRQRVWGVPIPIFYCRSCNHPIVNDETIEHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L ++ G + W++L+ ++LL + K DI+D+WFDSG S + VL +
Sbjct: 484 AKLFEKEGSNAWFTLTEKELLPQGLSCPECGHGEFRKETDIMDVWFDSGSSHAGVLAKRP 543
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GW+ SSL+T VA+K P++ + HGF +D +G KMSKS+GN
Sbjct: 544 ELQWPADLYLEGSDQYRGWYNSSLITGVAVKGQPPYKGILSHGFTLDGEGRKMSKSLGNT 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ D +Q KL G D+LR WV++ V I
Sbjct: 604 V---DPSQVCNKL--------------------------GADILRLWVSS-VDYQSDVRI 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
NIL+ + +KIR++LR+LLG L + +D Y + RL +
Sbjct: 634 SDNILSQITEVYRKIRNTLRFLLGNLSQFDPVKDRVDFAQMSELDQYAVIRLNRMTEKVT 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +++ + + +F E+S+FY ++KDRLY D+ + AR + L++ +
Sbjct: 694 KAYDAYEFHVVYQAVHHFCAVEMSSFYLDIIKDRLYADAADDSARKASQTVLYDALLAIT 753
Query: 999 RTVAPIMPHLAEEVYSHLPS 1018
+ +API+PH A+EV+ ++P
Sbjct: 754 KLIAPILPHTADEVWKYIPG 773
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 241/400 (60%), Gaps = 17/400 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y+ +E+ G+ +FILHDGPPYANG HIGHA+NKILKDI +R +QG YVPG
Sbjct: 34 NDIYAKVQESRKGREKFILHDGPPYANGDIHIGHALNKILKDIIVRFKTMQGYDAPYVPG 93
Query: 65 WDCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WD HGLPIE +AI + K+ +S + RK + +AL+ + QK +F+ G+ DW+H
Sbjct: 94 WDTHGLPIE-QAIANSGKVDRKKMSVAEFRKYCEEYALQWVERQKEQFKRLGIRGDWDHP 152
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T EY Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EYK + S SIY
Sbjct: 153 -YITLQPEYEAEQIRLFGEMVKKGYIYKGLKPVYWSPSSESALAEAEIEYK-EKTSPSIY 210
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ + + L + D +IWTTTPW+LPAN I+ +P Y+V V G ++A+
Sbjct: 211 VAFDVAEGQGKLPQ---DAAFVIWTTTPWTLPANLGISVHPDFTYAVVEVSGKKYVLAEG 267
Query: 241 LVES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ES K TD +V G L+++T HP R+ ++ V+ GTG VH
Sbjct: 268 LLESAAKAIGWTDYSMVSTVKGSELENVTCKHPFY--DRESLVMLGEHVTLEAGTGCVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--V 357
AP HG+DDF++ KI VL + +QG ++ +A PGLEG+ G +L +E +
Sbjct: 326 APGHGEDDFIVGQKYKIGVLCPVDDQGHFTAEA-PGLEGV-FYEKGNKTILEWLENSGHL 383
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + H Y +DWRTKKPVI +A++QWF ++ + E L
Sbjct: 384 LHASSINHQYAHDWRTKKPVIYRATEQWFASIDKFRDEML 423
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ +QG ++ +A PGLEG+ +G +L +E +L + H Y +DWRTKKPVI
Sbjct: 348 VDDQGHFTAEA-PGLEGV-FYEKGNKTILEWLENSGHLLHASSINHQYAHDWRTKKPVIY 405
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF ++ + E L ++ + + P + L + IA R WCISRQRVWGVPIP+F
Sbjct: 406 RATEQWFASIDKFRDEMLEEIKKIKWTPSWGEIRLHNMIADRGDWCISRQRVWGVPIPIF 465
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y + IVN+ I+H L ++ G + W++L ++LL
Sbjct: 466 YCRSCNHPIVNDETIEHVAKLFEKEGSNAWFTLTEKELL 504
>gi|385799639|ref|YP_005836043.1| isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
gi|309389003|gb|ADO76883.1| Isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 931
Score = 356 bits (914), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 218/627 (34%), Positives = 337/627 (53%), Gaps = 63/627 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-NQVPAHLLE-GATDLHALIWTTTPWSLPANQFIA 475
TALAE+E+E+ D + SIY+K L ++ +E + D + +IWTTTPW++P+N I
Sbjct: 193 TALAEAEVEHGEDR-APSIYVKFPLIDEFEVGGVELSSEDSYIVIWTTTPWTIPSNMAIT 251
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCD-FPGQYLQDITYIHPINKE 533
F+P Y V +G +++AK LVE + + D +++ + F + L++ HPI
Sbjct: 252 FHPEFPYVVVEAEGDKLVMAKDLVETVMANSEIEDYEIISEEFSAKKLENKKAKHPII-- 309
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG--- 590
R+ L+ V+ +G+G VH AP HG DD+++ + + + N+G ++ +AG
Sbjct: 310 DRESLLILGEHVTLDQGSGCVHTAPGHGHDDYIVGQEYGLEIYAPMDNKGYFTEEAGDFA 369
Query: 591 -PGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTER 648
+ NI+ K L E D+L N+ H YP+ WR K +I +A+ QWF +
Sbjct: 370 GKYYDEANIMVTDK-----LKEKDLLMNLNFIDHQYPHCWRCKGNLIFRATDQWFASIDA 424
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
IK E LA + +V++ P + + D IA R WCISRQ+ WGVPIP+F+ D I+N+
Sbjct: 425 IKEETLAAIADVDWYPAWGEGRMTDMIADRSDWCISRQKKWGVPIPIFFCDDCGEAIIND 484
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL----NTSDVNSN-VTKSNDILDIWFDSGISWSH 761
+ + E G W+ LS ++LL NS+ TK DI+D+WFDSG S
Sbjct: 485 DTLDSIKAIFAEKGSVAWYELSEKELLPEGYTCPHCNSDSFTKEEDIMDVWFDSGSSHKA 544
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL+ + PA VY+EG DQ GWF SSLLT+VA + AP+R V +GF VD+KG KMS
Sbjct: 545 VLEARDNLSWPAQVYLEGTDQYRGWFNSSLLTAVATEGVAPYREVITNGFTVDKKGNKMS 604
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GNV+S H K + YG D+LR WVA+ K
Sbjct: 605 KSKGNVVSPH-----------------------------KVIDQYGADILRLWVASSDFK 635
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
+ + + NIL S + ++IR++ R++LG + + + R +D +++ RL +
Sbjct: 636 N-DIRVSDNILKQSSEAYRRIRNTYRFILGNISDFDSDQNYVEYEDRRELDRWIMIRLQD 694
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ + Y ++Y R + NF E+S+ Y + KDRLY D + +R S TL++
Sbjct: 695 LIKKITSAYESYEYHRVYHDVHNFCTVEMSSLYMDITKDRLYTDGTDSLSRRSAQSTLYD 754
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
I L+ T+API+PH +EEV+ LP +
Sbjct: 755 ILMALMVTLAPIVPHTSEEVWQFLPEK 781
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 226/407 (55%), Gaps = 22/407 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E+Y E G FILHDGPPYANG HIGHA+NKILKD R L G Y+PGW
Sbjct: 35 EIYEKAVENREGNKPFILHDGPPYANGDIHIGHALNKILKDFVTRFATLNGYYSPYIPGW 94
Query: 66 DCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
D HGLPIE + + +S ++R+K N+AL+ ++ QK +F+ GV +W+ N
Sbjct: 95 DTHGLPIEYQVTSEMSDQERADISIAELREKCTNYALKYVDRQKEQFKRLGVWGEWD-NP 153
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T +KEY Q+ F + K+D YR KPV+W P TALAE+E+E+ D + SIY+
Sbjct: 154 YLTLNKEYEVKQIEVFGEMAKKDLFYRGKKPVHWCPHCETALAEAEVEHGEDR-APSIYV 212
Query: 182 KIKL-NQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
K L ++ +E + D + +IWTTTPW++P+N I F+P Y V +G +++AK
Sbjct: 213 KFPLIDEFEVGGVELSSEDSYIVIWTTTPWTIPSNMAITFHPEFPYVVVEAEGDKLVMAK 272
Query: 240 CLVESLKWTFQ-TDIEVVC-DFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
LVE++ + D E++ +F + L++ HPI R+ L+ V+ +G+G V
Sbjct: 273 DLVETVMANSEIEDYEIISEEFSAKKLENKKAKHPII--DRESLLILGEHVTLDQGSGCV 330
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD----AGPGLEGLNILGDGKDQVLHLV 353
H AP HG DD+++ + + + N+G ++ + AG + NI+ K L
Sbjct: 331 HTAPGHGHDDYIVGQEYGLEIYAPMDNKGYFTEEAGDFAGKYYDEANIMVTDK-----LK 385
Query: 354 EPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
E D+L N+ H YP+ WR K +I +A+ QWF + IK E L
Sbjct: 386 EKDLLMNLNFIDHQYPHCWRCKGNLIFRATDQWFASIDAIKEETLAA 432
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 1109 ITNQGKYSPDAG----PGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKP 1163
+ N+G ++ +AG + NI+ K L E D+L N+ H YP+ WR K
Sbjct: 355 MDNKGYFTEEAGDFAGKYYDEANIMVTDK-----LKEKDLLMNLNFIDHQYPHCWRCKGN 409
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+I +A+ QWF + IK E LA + V++ P + + D IA R WCISRQ+ WGVPI
Sbjct: 410 LIFRATDQWFASIDAIKEETLAAIADVDWYPAWGEGRMTDMIADRSDWCISRQKKWGVPI 469
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+F+ D I+N+ + + E G W+ L ++LL
Sbjct: 470 PIFFCDDCGEAIINDDTLDSIKAIFAEKGSVAWYELSEKELL 511
>gi|339009203|ref|ZP_08641775.1| isoleucyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|338773681|gb|EGP33212.1| isoleucyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
Length = 928
Score = 356 bits (914), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 220/617 (35%), Positives = 320/617 (51%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EY D S SIY++ + L + D +IWTTTPW+LPAN+ I+ N
Sbjct: 194 TALADAEIEYH-DKRSASIYVRFMVKDGKGKLDQ---DTGVIIWTTTPWTLPANKAISLN 249
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV G +VA LVE++ K ++ V F G L+ I HP R
Sbjct: 250 PDLEYSVVIADGNKYVVASGLVESVTKEIGWEQVETVQTFKGSDLEGIETQHPFY--DRI 307
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG+DDF ++ I VL + ++GK + +A PG EGL
Sbjct: 308 SPIILGDHVTLDAGTGCVHTAPGHGEDDFNVSKKYNIEVLCPVDHEGKMTQEA-PGFEGL 366
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP+I +A++QWF E + + L
Sbjct: 367 FYEDANKVVSEKLKENGALLKLSFITHSYPHDWRTKKPIIFRATEQWFASVEGFRSQMLE 426
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++EV + P + L + +A R WCISRQRVWGVPIP+FY + I+NE I H
Sbjct: 427 AIKEVKWTPHWGETRLANMVADRNDWCISRQRVWGVPIPIFYCKACNEPIINEQTIDHIA 486
Query: 714 TLIDEHGPDFWWSLSVEQLLN---TSDVN-SNVTKSNDILDIWFDSGISWSHVLKDK--- 766
L + G W++ L+ T D K DI+D+WFDSG S VL+ +
Sbjct: 487 NLFAKEGSGVWFAREAADLIPAGLTCDCGCKEFRKETDIMDVWFDSGSSHEAVLRQRDNL 546
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSL TSVA+ AP++++ HGF +D +G KMSKS+GN I
Sbjct: 547 SWPADLYLEGSDQYRGWFNSSLSTSVAVHGKAPYKSILSHGFTLDGEGRKMSKSLGNTIV 606
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
++T G D+LR WV++ I
Sbjct: 607 PKEVTD-----------------------------KLGADILRLWVSS-VDYQSDHRISD 636
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
IL + + +KIR++ R+LLG L + +D +ML + E
Sbjct: 637 AILAQNAEVYRKIRNTFRFLLGNLAGFDPMKDRVEYDRLPELDRFMLAKAAEMVKRTRKA 696
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y E+Q+ + + NF ELS+FY + KDRLY ++ + E R + +++I L++
Sbjct: 697 YDEYQFHTVYQTVHNFCTIELSSFYMDISKDRLYVEAPDSEERRAAQTVMYDILLDLVKL 756
Query: 1001 VAPIMPHLAEEVYSHLP 1017
++PI+PH A+EV+ +P
Sbjct: 757 LSPIIPHTADEVWQFIP 773
Score = 283 bits (723), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 226/398 (56%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y E +P FILHDGPPYANG HIGH++NK LKDI +R + G Y+PGW
Sbjct: 37 DIYKQVLERTKDRPSFILHDGPPYANGDIHIGHSLNKTLKDIIVRYKSMAGFYAPYIPGW 96
Query: 66 DCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
D HGLPIE +AI + KL + D RK+ + +A +N Q+ +F+ G+ DWE N
Sbjct: 97 DTHGLPIE-QAIVNAQKLDRRNIEVNDFRKRCEEYAWSYVNKQRDQFKRLGIRGDWE-NP 154
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY Q+ F + + YIY+ L+ VYWSPSS TALA++E+EY D S SIY+
Sbjct: 155 YVTLLPEYEAAQIRVFGAMATKGYIYKGLRCVYWSPSSETALADAEIEYH-DKRSASIYV 213
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + L + D +IWTTTPW+LPAN+ I+ NP LEYSV G +VA L
Sbjct: 214 RFMVKDGKGKLDQ---DTGVIIWTTTPWTLPANKAISLNPDLEYSVVIADGNKYVVASGL 270
Query: 242 VESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
VES+ K +E V F G L+ I HP R ++ V+ GTG VH A
Sbjct: 271 VESVTKEIGWEQVETVQTFKGSDLEGIETQHPFY--DRISPIILGDHVTLDAGTGCVHTA 328
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDF ++ I VL + ++GK + +A PG EGL K L E L
Sbjct: 329 PGHGEDDFNVSKKYNIEVLCPVDHEGKMTQEA-PGFEGLFYEDANKVVSEKLKENGALLK 387
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKP+I +A++QWF E + + L
Sbjct: 388 LSFITHSYPHDWRTKKPIIFRATEQWFASVEGFRSQML 425
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++GK + +A PG EGL K L E L ++ HSYP+DWRTKKP+I +
Sbjct: 350 VDHEGKMTQEA-PGFEGLFYEDANKVVSEKLKENGALLKLSFITHSYPHDWRTKKPIIFR 408
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF E + + L ++ V + P + L + +A R WCISRQRVWGVPIP+FY
Sbjct: 409 ATEQWFASVEGFRSQMLEAIKEVKWTPHWGETRLANMVADRNDWCISRQRVWGVPIPIFY 468
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ I+NE I H L + G W++ L+
Sbjct: 469 CKACNEPIINEQTIDHIANLFAKEGSGVWFAREAADLI 506
>gi|417642913|ref|ZP_12292991.1| isoleucine--tRNA ligase [Staphylococcus warneri VCU121]
gi|330686341|gb|EGG97946.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU121]
Length = 916
Score = 356 bits (914), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 323/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDDKGVV---DKDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G I+A+ L E + + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGKKYIIAQALAETVAEALEWDQDTIQLEKEFTGKELEYVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RTSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L + D L N+ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLTKKDALLKLNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ F + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ + LL + N TK NDI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEQHGSNIWFEKEAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ TSVA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTSVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG + + + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 230/398 (57%), Gaps = 18/398 (4%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G +ILHDGPPYANG+ H+GHA+NKI+KD +R +QG YVPGWD
Sbjct: 37 YEKALEKNKGNASYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FALE I QK +F+ GV D+ ++ Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSTAEFREKCKEFALEQIEIQKKDFKRLGVRGDF-NDPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LKPEYEAAQIRLFGEMAEKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFD 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ + D +IWTTTPW++P+N I +P L+Y +V G I+A+ L E+
Sbjct: 214 VKDDKGVV---DKDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGKKYIIAQALAET 270
Query: 245 ----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L+W Q I++ +F G+ L+ + HP R ++ V++ GTG VH A
Sbjct: 271 VAEALEWD-QDTIQLEKEFTGKELEYVEAQHPF--LDRTSLVINGEHVTTDAGTGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ +PV++ + ++G ++ + GP EG+ K L + D L
Sbjct: 328 PGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLTKKDALLK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N+ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 387 LNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L + D L N+ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLTKKDALLKLNFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E F + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEQHGSNIWFEKEAKDLL 504
>gi|348027410|ref|YP_004767215.1| isoleucyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341823464|emb|CCC74388.1| isoleucyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 931
Score = 356 bits (914), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 221/632 (34%), Positives = 331/632 (52%), Gaps = 58/632 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT--DLHALIWTTTPWSLPANQFIA 475
TALAE+E+EYK D S SIY+K K + H+ +GA + ALIWTTTPW++P N I+
Sbjct: 192 TALAEAEIEYKDDK-SFSIYVKFKSVDLNCHMPKGADPDKVFALIWTTTPWTIPCNVAIS 250
Query: 476 FNPALEYSVASVKGANVIVAKCLVE-NLKWTFQTDIDVVCD-FPGQYLQDITYIHPINKE 533
N EY + +++AK LVE +K D +V+ D G+ L+ + + HP
Sbjct: 251 ANENFEYVWVRIGDEYLLMAKDLVEPTMKAGKVEDYEVLPDVMTGKQLEGLVFKHPFY-- 308
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA---LAEKIPVLNLITNQGKYSPDAG 590
R + ++ V+ GTGLVH AP HGQDDF + A + L + G+Y+ D
Sbjct: 309 DRKVPIILGDHVTLEAGTGLVHTAPDHGQDDFDVCKKYAAWGLKPLGTVDGTGRYT-DKV 367
Query: 591 PGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERI 649
PG EG + + L E L+ ++ ++H YP+ WR K+P+I +A++QWF +
Sbjct: 368 PGFEGQFVFDTNVPVIKKLAELGALFAKSTFRHQYPHCWRCKEPIIYRATEQWFASVDGF 427
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEA 707
+ +AL ++ V ++P + + I R WCISRQRVWGVPIP+FY D I+N+
Sbjct: 428 RQKALDAIDTVKWIPSWGHDRIYNMIHDRGDWCISRQRVWGVPIPIFYCEDCGEHIINDE 487
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHV 762
I H + E G D WW V++L+ ++ K DI+D+WFDSG + V
Sbjct: 488 TIAHLQKMFAEEGSDTWWMHDVKELMPEGYKCPHCGGTHFRKETDIMDVWFDSGCTHQGV 547
Query: 763 LK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
LK D P +Y+EG DQ GWF SSLLTSVA+ AP+++V HGF VD +G KMSK
Sbjct: 548 LKNDPDLDYPCEMYLEGSDQHRGWFNSSLLTSVAVNGYAPYKSVLTHGFTVDGEGRKMSK 607
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
SVGN ++ ++ + YG DVLR WV++ A
Sbjct: 608 SVGNTVAPQEVIE-----------------------------KYGADVLRLWVSS-ADYQ 637
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
+ + IL D +KIR++ RYLLG L + + I+ +D + L RL +
Sbjct: 638 GDIRLSPKILKQLSDVYRKIRNTFRYLLGNLADFDPAKDMIAYQDMTDLDKWALLRLEQV 697
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y +Q+ + NF +LSA Y ++KDRLY + + + R S ++ I
Sbjct: 698 FEEVTDAYENYQFHVMYHAIHNFCTVDLSAMYLDVIKDRLYTEKADSQIRRSAQSAMYVI 757
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSS 1025
L++ VAP++ AEEV+ ++P+ +G S
Sbjct: 758 LDTLVKIVAPVLSFTAEEVWQNMPAVEGKEES 789
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/404 (40%), Positives = 233/404 (57%), Gaps = 16/404 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y + + +G P+FILHDGPPYANG HIGHA+NK+LKDI L+ QG YVPG
Sbjct: 34 NKIYEKRLKKRDGAPKFILHDGPPYANGKIHIGHALNKVLKDIILKYKTQQGCYTKYVPG 93
Query: 65 WDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE +K ++PLD+R K +++AL + QK +F GVL DW+H
Sbjct: 94 WDTHGLPIEHAVIKDTGLNRHEMAPLDLRAKCRDYALARVEEQKKDFIRLGVLGDWDHP- 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T K Q+ F + K+ YIY+ LK VYW P TALAE+E+EYK D S SIY+
Sbjct: 153 YLTLRKPVEVAQIGVFGEMAKKGYIYKGLKTVYWCPHCETALAEAEIEYKDDK-SFSIYV 211
Query: 182 KIKLNQVPAHLLEGA--TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
K K + H+ +GA + ALIWTTTPW++P N I+ N EY + +++AK
Sbjct: 212 KFKSVDLNCHMPKGADPDKVFALIWTTTPWTIPCNVAISANENFEYVWVRIGDEYLLMAK 271
Query: 240 CLVE-SLKWTFQTDIEVVCD-FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
LVE ++K D EV+ D G+ L+ + + HP R + ++ V+ GTGLV
Sbjct: 272 DLVEPTMKAGKVEDYEVLPDVMTGKQLEGLVFKHPFY--DRKVPIILGDHVTLEAGTGLV 329
Query: 298 HCAPAHGQDDFLLA---LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
H AP HGQDDF + A + L + G+Y+ D PG EG + + L E
Sbjct: 330 HTAPDHGQDDFDVCKKYAAWGLKPLGTVDGTGRYT-DKVPGFEGQFVFDTNVPVIKKLAE 388
Query: 355 PDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L+ ++ ++H YP+ WR K+P+I +A++QWF + + +AL
Sbjct: 389 LGALFAKSTFRHQYPHCWRCKEPIIYRATEQWFASVDGFRQKAL 432
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPV 1164
L + G+Y+ D PG EG + + L E L+ ++ ++H YP+ WR K+P+
Sbjct: 354 LGTVDGTGRYT-DKVPGFEGQFVFDTNVPVIKKLAELGALFAKSTFRHQYPHCWRCKEPI 412
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A++QWF + + +AL ++ V ++P + + I R WCISRQRVWGVPIP
Sbjct: 413 IYRATEQWFASVDGFRQKALDAIDTVKWIPSWGHDRIYNMIHDRGDWCISRQRVWGVPIP 472
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY D I+N+ I H + E G D WW V++L+
Sbjct: 473 IFYCEDCGEHIINDETIAHLQKMFAEEGSDTWWMHDVKELM 513
>gi|376261454|ref|YP_005148174.1| isoleucyl-tRNA synthetase [Clostridium sp. BNL1100]
gi|373945448|gb|AEY66369.1| isoleucyl-tRNA synthetase [Clostridium sp. BNL1100]
Length = 929
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 209/622 (33%), Positives = 330/622 (53%), Gaps = 55/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFI 474
TALAE+E+EY D + SIY+K ++ + +G ++ +IWTTT W+LPAN I
Sbjct: 194 TALAEAEIEY-ADDTTVSIYVKFQVRDDKG-IFQGVAPKEKINFVIWTTTTWTLPANLAI 251
Query: 475 AFNPALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
N + EYSV ++A LVEN +K T+ + V F G L+ I HP
Sbjct: 252 CLNESFEYSVVKANDEYYVLAAELVENTMKAAAITEYETVAKFKGSELEGILCKHPFL-- 309
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD ++ V+ GTG VH AP HG +DFL+ KIPVL + ++G + +AGP
Sbjct: 310 DRDSIVILGDHVTLEAGTGCVHTAPGHGAEDFLVCQKYKIPVLVPVDSKGFLTKEAGP-F 368
Query: 594 EGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ + L + +L +E H YP+ WR K P+I +A++QWF + + E
Sbjct: 369 AGMFYKKSNPAIIEKLTQDGRLLASEKITHQYPHCWRCKDPIIFRATEQWFASIDGFRKE 428
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
AL +++V ++PE ++ + + + R WCISRQR+WGVPIP+FY D ++ + +IK
Sbjct: 429 ALKAIKDVKWIPEWGEERITNMVRDRGDWCISRQRIWGVPIPIFYCKDCGKELITDESIK 488
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDV----NSNVTKSNDILDIWFDSGISWSHVLKDK 766
L E G + W+++ ++L + +K DI+D+WFDSG S VL+++
Sbjct: 489 AVADLFREKGSNAWYAMDASEILPKGTKCECGHHEFSKETDIMDVWFDSGSSHVAVLENR 548
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLTSVA K AP+R V HG+VVD +G KMSKS+GN
Sbjct: 549 EGLSWPADLYLEGSDQHRGWFQSSLLTSVATKGNAPYRKVLTHGYVVDGEGRKMSKSLGN 608
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I D+ + YG D+LR WVA+ + +
Sbjct: 609 GIDPADV-----------------------------IKEYGADILRLWVAS-SDYTTDIR 638
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I K++L + +KIR++ RY+LG +++ + T S+ +D + L R+ +
Sbjct: 639 ISKDLLKQLSEVYRKIRNTARYILGNINDFNPDTDSVDYNELNELDKWALSRMNNLIKRV 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y +++ + NF V ++S FY ++KDRLY + + + R + ++ I H L
Sbjct: 699 NEAYDTYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSNADSKERRAAQTVMYEILHNL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSR 1019
+R + P++ EE++ ++P R
Sbjct: 759 VRMLTPVLAFTTEEIWQYMPHR 780
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/400 (39%), Positives = 224/400 (56%), Gaps = 14/400 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y+ Q + GKP FILHDGPPYANG H+G +NK+LKDI ++ + G YVPGW
Sbjct: 37 DIYNKQLKKAEGKPSFILHDGPPYANGGIHLGTTLNKVLKDIVVKYKSMSGYYTPYVPGW 96
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +AI K + P+ R+ + FA++ ++ Q+ F+ GV ADWEH Y
Sbjct: 97 DTHGLPIEQRAIKELGLKRHEVGPVVFREACEGFAMKYLDIQRESFKRLGVRADWEHP-Y 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ +IY+ LKPVYW P TALAE+E+EY D + SIY+K
Sbjct: 156 ITLKPEFEAKQIEVFGEMAKKGHIYKGLKPVYWCPECETALAEAEIEY-ADDTTVSIYVK 214
Query: 183 IKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
++ + +G ++ +IWTTT W+LPAN I N + EYSV ++A
Sbjct: 215 FQVRDDKG-IFQGVAPKEKINFVIWTTTTWTLPANLAICLNESFEYSVVKANDEYYVLAA 273
Query: 240 CLVE-SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
LVE ++K T+ E V F G L+ I HP RD ++ V+ GTG VH
Sbjct: 274 ELVENTMKAAAITEYETVAKFKGSELEGILCKHPF--LDRDSIVILGDHVTLEAGTGCVH 331
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-V 357
AP HG +DFL+ KIPVL + ++G + +AGP G+ + L + +
Sbjct: 332 TAPGHGAEDFLVCQKYKIPVLVPVDSKGFLTKEAGP-FAGMFYKKSNPAIIEKLTQDGRL 390
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L +E H YP+ WR K P+I +A++QWF + + EAL
Sbjct: 391 LASEKITHQYPHCWRCKDPIIFRATEQWFASIDGFRKEAL 430
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 1144 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRD 1203
+L +E H YP+ WR K P+I +A++QWF + + EAL ++ V ++PE ++ + +
Sbjct: 390 LLASEKITHQYPHCWRCKDPIIFRATEQWFASIDGFRKEALKAIKDVKWIPEWGEERITN 449
Query: 1204 QIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQ 1261
+ R WCISRQR+WGVPIP+FY D ++ + +IK L E G + W+++ +
Sbjct: 450 MVRDRGDWCISRQRIWGVPIPIFYCKDCGKELITDESIKAVADLFREKGSNAWYAMDASE 509
Query: 1262 LL 1263
+L
Sbjct: 510 IL 511
>gi|56964107|ref|YP_175838.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
gi|81822091|sp|Q5WFI3.1|SYI_BACSK RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|56910350|dbj|BAD64877.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
Length = 923
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 316/618 (51%), Gaps = 54/618 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ ++ L E D +IWTTTPW++PAN I +
Sbjct: 192 SALAEAEIEYY-DKRSASIYVAFQVADGKGVLPE---DAALVIWTTTPWTIPANLGITVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV G + +VA L+E+++ D+ V G+ L I HP RD
Sbjct: 248 PQLEYSVVRTGGRSFVVASGLLEHVQTELSWEDVVVEKTVTGKELDYIVCRHPFY--DRD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG DDF++ + VL I ++G + +A PG EG
Sbjct: 306 SIVMNGEHVTLDAGTGCVHTAPGHGVDDFVVGQKYGLDVLCPIDDKGIMTSEA-PGFEGE 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L L + HSYP+DWRTKKPVI +A+ QWF I+ E L
Sbjct: 365 FYDNINKMVTEKLEAVGALLKLGFITHSYPHDWRTKKPVIFRATSQWFASIANIRKELLQ 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCT 714
+ ++P + L + + R WCISRQR WGVPIPVFY D T IV+E I+H
Sbjct: 425 AVANTEWIPAWGETRLHNMVRDRGDWCISRQRAWGVPIPVFYGEDGTEIVSEETIEHVSN 484
Query: 715 LIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
L EHG + W+ + LL + N + TK DI+D+WFDSG S VL+++
Sbjct: 485 LFREHGSNVWFEREAKDLLPPGFTSPHSPNGHFTKETDIMDVWFDSGSSHQGVLRERNDL 544
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y EG DQ GWF SSL TSVA+ AP++ V HGFV+D +G KMSKS+GN++
Sbjct: 545 VFPADLYFEGSDQYRGWFNSSLSTSVAINGVAPYKGVLSHGFVMDGEGKKMSKSLGNIV- 603
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
V N + + G D+LR WVA+ +
Sbjct: 604 -----------------VPNTV-----------MKQLGADILRLWVAS-VDYQADSRVSD 634
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
+IL + +KIR++ R+LLG LH+ ++ R V ++L RL E M
Sbjct: 635 SILKQVAETYRKIRNTFRFLLGNLHDFDPKINAVPRDQLTGVHAFLLVRLNELTKRMHEG 694
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y E+Q+ NF ELS+FY + KD LY + + R + ++ + L +
Sbjct: 695 YNEYQFLNVYNHFRNFCTVELSSFYMDISKDTLYIEHADHPERRAFQTVMYEVVTALTKL 754
Query: 1001 VAPIMPHLAEEVYSHLPS 1018
+API+PH A+EV+ ++P
Sbjct: 755 IAPILPHTADEVWENIPG 772
Score = 263 bits (673), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 220/397 (55%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y +E G+P F+LHDGPPYANG H+GHA+NKI+KD +R + G YVPGW
Sbjct: 35 DIYKQVQERTEGRPYFVLHDGPPYANGDIHMGHALNKIIKDFIVRYKSMSGFHAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +K K +S D RK + +ALE IN+Q+ +F GV DW Y
Sbjct: 95 DTHGLPIETALTKNKKVDRKSMSIADFRKLCEEYALEQINSQRQQFMRLGVRGDW-WKPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +KE+ Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 154 ITLEKEFEAEQIKVFGKMAKKGYIYKGKKPVYWSPSSESALAEAEIEYY-DKRSASIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
++ L E D +IWTTTPW++PAN I +P LEYSV G + +VA L+
Sbjct: 213 FQVADGKGVLPE---DAALVIWTTTPWTIPANLGITVHPQLEYSVVRTGGRSFVVASGLL 269
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E ++ D+ V G+ L I HP RD ++ V+ GTG VH AP
Sbjct: 270 EHVQTELSWEDVVVEKTVTGKELDYIVCRHPFY--DRDSIVMNGEHVTLDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG DDF++ + VL I ++G + +A PG EG K L L
Sbjct: 328 GHGVDDFVVGQKYGLDVLCPIDDKGIMTSEA-PGFEGEFYDNINKMVTEKLEAVGALLKL 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF I+ E L
Sbjct: 387 GFITHSYPHDWRTKKPVIFRATSQWFASIANIRKELL 423
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKPVI +A+ QWF I+ E L + ++P + L + + R W
Sbjct: 391 HSYPHDWRTKKPVIFRATSQWFASIANIRKELLQAVANTEWIPAWGETRLHNMVRDRGDW 450
Query: 1212 CISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
CISRQR WGVPIPVFY D T IV+E I+H L EHG + W+ + LL
Sbjct: 451 CISRQRAWGVPIPVFYGEDGTEIVSEETIEHVSNLFREHGSNVWFEREAKDLL 503
>gi|218282319|ref|ZP_03488609.1| hypothetical protein EUBIFOR_01191 [Eubacterium biforme DSM 3989]
gi|218216692|gb|EEC90230.1| hypothetical protein EUBIFOR_01191 [Eubacterium biforme DSM 3989]
Length = 908
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 217/628 (34%), Positives = 321/628 (51%), Gaps = 54/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S +IY+K + L TD + +IWTTTPW++PAN I+ N
Sbjct: 191 SALAEAEVEYK-DVKSPTIYVKFAVKDGKGVL---DTDCNFVIWTTTPWTIPANLGISVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ + +I+ +VE L F+ + DV+ F G+ + IT HP+ E+
Sbjct: 247 PDFDYSLVDTEKGKLIMLSSMVEELCDKFEVEKRDVLKTFKGKEFEYITCTHPLYPERES 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L L+ V++ GTG VH AP G DDF + + +PV + QG D G L G
Sbjct: 307 L-LMCGDHVTADAGTGCVHTAPGFGVDDFNIGMKYGLPVYCNVDAQGCMMDDVGEWLAGQ 365
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
+ K L E VL + HSYP+DWRTKKP+I +A+ QWF ++I+ E L
Sbjct: 366 YVEDANKTVTQKLDELGVLLKLQFITHSYPHDWRTKKPIIFRATTQWFASIDQIRDELLE 425
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCT 714
+ V++VP ++ + + IA R WCISRQR WGVPIP+ Y + DT I+++A H
Sbjct: 426 QIHSVSWVPAWGEQRMHNMIADRNDWCISRQRAWGVPIPIIYGEDDTPIMDQAIFDHVAK 485
Query: 715 LIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
L+ E+G + W+ V+ LL N N K D +D+WFDSG S + + D+
Sbjct: 486 LVGEYGSNVWFERDVKDLLPEGYTNEHSPNGIFRKETDTMDVWFDSGSSHTGAMMDRGLG 545
Query: 767 -PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISA 825
PA +Y EG DQ GWF SSL+ A+ AP++ V HGFV+DEKG KMSKS N ++
Sbjct: 546 YPADLYFEGSDQYRGWFNSSLIVGTAVHGKAPYKQVLSHGFVMDEKGVKMSKSQWNAVAP 605
Query: 826 HDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKN 885
+IT+ YG D+LR W A V +G+
Sbjct: 606 SEITK-----------------------------KYGADILRLW-ACSVDYQADVSMGQK 635
Query: 886 ILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY-----VDVYMLKRLCEFQNTMDTL 940
IL ++ +K+R++LR+L+ L + + + +D Y+L L + +
Sbjct: 636 ILKQVSENYRKVRNTLRFLMANLDDQKFTAKDCVNFNELSELDQYILTELKDAVDYCRKA 695
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y E++++ L N + NELSA+Y KD LY + + R L+N V+ +
Sbjct: 696 YNEYRFSDVVTYLTNLMTNELSAYYLDYTKDILYIEKEDAPVRRQVQTVLYNAVEVMTKL 755
Query: 1001 VAPIMPHLAEEV--YSHLPSRQGTFSSF 1026
API+ H EEV Y H ++F
Sbjct: 756 WAPILAHTCEEVNDYMHFDEESIHLTTF 783
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 229/397 (57%), Gaps = 10/397 (2%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY E G F+LHDGPPYANG H+GHA+NK+LKD+ ++S+ ++G + Y+PG
Sbjct: 34 EKLYEKMLERREGAESFVLHDGPPYANGDIHLGHALNKVLKDVIVKSHFMEGYKTPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE + + K + + RK ++AL+ + QKA F S G + D++H Y
Sbjct: 94 WDTHGLPIETAVTKLGYDRKKMGIAEFRKICYDYALKQVANQKAGFLSLGSIGDYDHP-Y 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T K + K+Q+ F + + IY+ LKPVYWSPSS +ALAE+E+EYK D S +IY+K
Sbjct: 153 ITLQKGFEKHQIEIFGKMAMKGLIYKGLKPVYWSPSSESALAEAEVEYK-DVKSPTIYVK 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L TD + +IWTTTPW++PAN I+ NP +YS+ + +I+ +V
Sbjct: 212 FAVKDGKGVL---DTDCNFVIWTTTPWTIPANLGISVNPDFDYSLVDTEKGKLIMLSSMV 268
Query: 243 ESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E L F+ + +V+ F G+ + IT HP+ E+ L L+ V++ GTG VH AP
Sbjct: 269 EELCDKFEVEKRDVLKTFKGKEFEYITCTHPLYPERESL-LMCGDHVTADAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
G DDF + + +PV + QG D G L G + K L E VL
Sbjct: 328 GFGVDDFNIGMKYGLPVYCNVDAQGCMMDDVGEWLAGQYVEDANKTVTQKLDELGVLLKL 387
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP+I +A+ QWF ++I+ E L
Sbjct: 388 QFITHSYPHDWRTKKPIIFRATTQWFASIDQIRDELL 424
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ QG D G L G + K L E VL + HSYP+DWRTKKP+I +
Sbjct: 348 VDAQGCMMDDVGEWLAGQYVEDANKTVTQKLDELGVLLKLQFITHSYPHDWRTKKPIIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++I+ E L + V++VP ++ + + IA R WCISRQR WGVPIP+ Y
Sbjct: 408 ATTQWFASIDQIRDELLEQIHSVSWVPAWGEQRMHNMIADRNDWCISRQRAWGVPIPIIY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ DT I+++A H L+ E+G + W+ V+ LL
Sbjct: 468 GEDDTPIMDQAIFDHVAKLVGEYGSNVWFERDVKDLL 504
>gi|390630016|ref|ZP_10258006.1| Isoleucyl-tRNA synthetase [Weissella confusa LBAE C39-2]
gi|390484807|emb|CCF30354.1| Isoleucyl-tRNA synthetase [Weissella confusa LBAE C39-2]
Length = 929
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 216/633 (34%), Positives = 328/633 (51%), Gaps = 55/633 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALA +E+EY D S + + ++ L D + + WTTTPW++PA+Q +A N
Sbjct: 191 SALAMAEIEYH-DIESNTAFFSERVKDGKGLL---DNDTYFIAWTTTPWTVPASQALALN 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQ 534
EYS KG++ IVA L+ + F D +VV F G+ L+ +T HP
Sbjct: 247 ADFEYSQIQPKGSDKKYIVASALLGAVAPKFGWDEYEVVATFTGKELEMVTTEHPFM--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R++ ++ A +V++ GTG VH AP G+DDF +PV+ + +QGK + +AGP E
Sbjct: 305 REILVVNADYVTADAGTGAVHTAPGFGEDDFATGQRYNMPVIMNVDDQGKMTAEAGPDFE 364
Query: 595 GLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K + L E D L E HSYP+DWRTKKPVI +A QWF + + +
Sbjct: 365 GVFYQDADKVALQKLEEADALILHEPVVHSYPFDWRTKKPVIFRAVPQWFASIDSFRQDI 424
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L L++V F PE KK L + I R W ISRQRVWGVP+P+FY D T IV+ I H
Sbjct: 425 LDALDDVTFQPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIFYAEDGTAIVDPEIIDHI 484
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L+ EHG + W+ + LL N N TK DI+D+WFDSG S V+ +P
Sbjct: 485 ADLVAEHGSNVWFEREAKDLLPEGYSNEHSPNGEFTKETDIMDVWFDSGTSHQGVMATRP 544
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+ +EG DQ GWF SSL+T VA+ AP+++V GFV+D G KMSKS+GN+
Sbjct: 545 NLSFPEDLVLEGSDQYRGWFNSSLITGVAVTGKAPYKSVLSQGFVLDGNGEKMSKSLGNI 604
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
IS +++ + G +++R WV + S V +
Sbjct: 605 ISPNEVVK-----------------------------EMGAEIIRLWVTSVDSS-ADVRV 634
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
++L+ + + +KIR+++R+LL + +++ D Y R + +
Sbjct: 635 SMDLLSQTSETYRKIRNTMRFLLANTSDFDPKADTVAFDDLVAADQYFYARFNKLVADIK 694
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + +++++NF+ +LSAFY KD LY ++ G ARLS L+ + L
Sbjct: 695 AAYDVYDFQAVNKLVINFINVDLSAFYLDFAKDILYVEAPKGHARLSLQTVLYKVLVDLD 754
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKV 1031
+ + PI+PH AEE++ +L +G F+ V
Sbjct: 755 KLLLPILPHTAEEIFEYLEHEEGDFAYLTEMPV 787
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 227/394 (57%), Gaps = 14/394 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ +N GKP F+LHDGPPYANG HIGHA+NKI KDI +R + G +VPGWD HG
Sbjct: 39 QRQKMNEGKPSFMLHDGPPYANGNIHIGHAMNKISKDIIVRYKSMNGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K + P+ RK A+ FA + + TQ A+F+ G+ ADW+ N Y T
Sbjct: 99 LPIEQQLTKAGKDRKAVGPVIWRKMAEEFARKQVKTQMADFKRLGISADWD-NPYLTLLP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ QL F + K++ IYR KPV+WS SS +ALA +E+EY D S + + ++
Sbjct: 158 EFEAAQLRVFGEMAKKNLIYRGKKPVFWSWSSESALAMAEIEYH-DIESNTAFFSERVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESL 245
L D + + WTTTPW++PA+Q +A N EYS KG++ IVA L+ ++
Sbjct: 217 GKGLL---DNDTYFIAWTTTPWTVPASQALALNADFEYSQIQPKGSDKKYIVASALLGAV 273
Query: 246 KWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F D EVV F G+ L+ +T HP R++ ++ A +V++ GTG VH AP G
Sbjct: 274 APKFGWDEYEVVATFTGKELEMVTTEHPFM--DREILVVNADYVTADAGTGAVHTAPGFG 331
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-ENY 363
+DDF +PV+ + +QGK + +AGP EG+ K + L E D L E
Sbjct: 332 EDDFATGQRYNMPVIMNVDDQGKMTAEAGPDFEGVFYQDADKVALQKLEEADALILHEPV 391
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A QWF + + + L
Sbjct: 392 VHSYPFDWRTKKPVIFRAVPQWFASIDSFRQDIL 425
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ +QGK + +AGP EG+ K + L E D L E HSYP+DWRTKKPVI +
Sbjct: 349 VDDQGKMTAEAGPDFEGVFYQDADKVALQKLEEADALILHEPVVHSYPFDWRTKKPVIFR 408
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A QWF + + + L L+ V F PE KK L + I R W ISRQRVWGVP+P+FY
Sbjct: 409 AVPQWFASIDSFRQDILDALDDVTFQPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIFY 468
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T IV+ I H L+ EHG + W+ + LL
Sbjct: 469 AEDGTAIVDPEIIDHIADLVAEHGSNVWFEREAKDLL 505
>gi|154148579|ref|YP_001406468.1| isoleucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
gi|166200203|sp|A7I1S7.1|SYI_CAMHC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|153804588|gb|ABS51595.1| isoleucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
Length = 921
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 234/666 (35%), Positives = 342/666 (51%), Gaps = 76/666 (11%)
Query: 389 TERIKPEALVCKTVGNILGR-VGITHDRP-------GTALAESELEYKPDHISKSIYLKI 440
T + K EA + K + I + + I +P G+ALAE+E+EYK D SIY+
Sbjct: 157 TMKFKFEAEIYKGLCEIAKKGLLIERSKPVFWSWAAGSALAEAEVEYK-DKEDYSIYIAF 215
Query: 441 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 500
L+ A+ GA A+IWTTTPW++PANQ I NP Y + S N I AK L+E
Sbjct: 216 DLSD-EANKKIGAKGAKAVIWTTTPWTIPANQAICLNPDEIYVLTS---ENFIFAKHLLE 271
Query: 501 NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 560
NL + +V +F L+++ +P+N R K + V GTGLVH AP H
Sbjct: 272 NLVQKGISKGKIVKEFASGELENLYAKNPLN--DRPSKFILGEHVLMDGGTGLVHTAPGH 329
Query: 561 GQDDFLLALAEKIPVLNLITNQGKYSP----------DAGPGLEGLNILGDGKDQVLHLV 610
G+DD+ ++L I + + + GKY + G++I ++++ L+
Sbjct: 330 GEDDYYVSLKYGIETIMPVDDAGKYDETIKTKKLFRDNVVDEFVGMHIF-KANEKIVELL 388
Query: 611 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI-------DTERIKPEALACLEEVNFV 663
V+ + HSYPY WRT KPVI +A++QWFI D + ++ AL L+EV F
Sbjct: 389 GDAVVSVGKFTHSYPYCWRTHKPVIYRATKQWFIAMDKPFKDGKTLREVALNALKEVKFY 448
Query: 664 PESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVNEANIKHFCTLIDEHGP 721
PE + + I RP WCISRQR WGVPI F D T I ++ + + + E G
Sbjct: 449 PEVGRNRITSMIENRPDWCISRQRDWGVPIAFFRDKATKEPIFDDEILNNIYEIFKEKGA 508
Query: 722 DFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSGISWSHVLK-------DKPAHVYM 772
D WW L + +LL N N+ K DILD+WFDSG +W VLK + A +Y+
Sbjct: 509 DAWWELDIGELLPKNCKYEAKNLEKVVDILDVWFDSGSTWRAVLKSGDYDAGEFRADMYL 568
Query: 773 EGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGA 832
EG DQ GWF SSLL S A+ TAP++++ HGF VDEKG KMSKSVGNVI+ ++ A
Sbjct: 569 EGSDQHRGWFQSSLLVSSAINETAPYKSILTHGFTVDEKGQKMSKSVGNVIAPQEV---A 625
Query: 833 KKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQD 892
KK YGV+++R WV + + I NIL +
Sbjct: 626 KK--------------------------YGVEIMRLWVGL-SDYSSDLKISDNILKQVSE 658
Query: 893 DVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRL-CEFQNTMDTLYGEFQYARASR 951
+KIR+++R+LL + + E + +D ++L + F+ T + + + +++
Sbjct: 659 QYRKIRNTIRFLLANVSDLKEIETNNFTMLDKWILSKANIAFEET-NRAFRNYDFSKGFS 717
Query: 952 VLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEE 1011
VLLNF+ +LS Y + KDRLYCD ++ R S T+ I LL +AP + + +E
Sbjct: 718 VLLNFLSADLSGIYLDVCKDRLYCDELDSSRRRSAQSTMVLITRTLLPLIAPTLTYTVDE 777
Query: 1012 VYSHLP 1017
V P
Sbjct: 778 VMEFAP 783
Score = 246 bits (628), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 230/427 (53%), Gaps = 30/427 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK---AI 77
F LHDGPPYANG HIGHA+NKILKDI ++++ G+ V YVPGWDCHGLPIE + +
Sbjct: 52 FNLHDGPPYANGHLHIGHALNKILKDIIVKTHYFAGENVRYVPGWDCHGLPIEQQIEIKL 111
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH---NCYHTFDKEYVKNQL 134
K S IR+ + A E IN Q+ EF+ G++ DW+ F+ E K L
Sbjct: 112 GGKKNETSKTKIREMCRAHAREFINIQRDEFKDMGIIGDWDDPYITMKFKFEAEIYKG-L 170
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
C+ + K+ + KPV+WS ++ +ALAE+E+EYK D SIY+ L+ A+
Sbjct: 171 CE---IAKKGLLIERSKPVFWSWAAGSALAEAEVEYK-DKEDYSIYIAFDLSD-EANKKI 225
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIE 254
GA A+IWTTTPW++PANQ I NP Y + S N I AK L+E+L + +
Sbjct: 226 GAKGAKAVIWTTTPWTIPANQAICLNPDEIYVLTS---ENFIFAKHLLENLVQKGISKGK 282
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
+V +F L+++ +P+N R K + V GTGLVH AP HG+DD+ ++L
Sbjct: 283 IVKEFASGELENLYAKNPLN--DRPSKFILGEHVLMDGGTGLVHTAPGHGEDDYYVSLKY 340
Query: 315 KIPVLNLITNQGKYSP----------DAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQ 364
I + + + GKY + G++I ++++ L+ V+ +
Sbjct: 341 GIETIMPVDDAGKYDETIKTKKLFRDNVVDEFVGMHIF-KANEKIVELLGDAVVSVGKFT 399
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVG-NILGRVGITHDRPGTALAES 423
HSYPY WRT KPVI +A++QWFI ++ + + V N L V + G S
Sbjct: 400 HSYPYCWRTHKPVIYRATKQWFIAMDKPFKDGKTLREVALNALKEVKF-YPEVGRNRITS 458
Query: 424 ELEYKPD 430
+E +PD
Sbjct: 459 MIENRPD 465
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 1125 GLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI-------DTE 1177
G++I + ++++ L+ V+ + HSYPY WRT KPVI +A++QWFI D +
Sbjct: 374 GMHIF-KANEKIVELLGDAVVSVGKFTHSYPYCWRTHKPVIYRATKQWFIAMDKPFKDGK 432
Query: 1178 RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVN 1235
++ AL L+ V F PE + + I RP WCISRQR WGVPI F D T I +
Sbjct: 433 TLREVALNALKEVKFYPEVGRNRITSMIENRPDWCISRQRDWGVPIAFFRDKATKEPIFD 492
Query: 1236 EANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ + + + E G D WW L + +LL
Sbjct: 493 DEILNNIYEIFKEKGADAWWELDIGELL 520
>gi|347750591|ref|YP_004858156.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
gi|347583109|gb|AEO99375.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
Length = 922
Score = 356 bits (913), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 219/624 (35%), Positives = 325/624 (52%), Gaps = 66/624 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALA++E+EYK D S SIY+ + L TD +IWTTTPW++P+N IA N
Sbjct: 191 SALADAEIEYK-DIKSPSIYVAFDVKDGKGVL---DTDTKIVIWTTTPWTIPSNLGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P + Y V G +VA+ L+E + + + +VV PG+ L+ I HP+ RD
Sbjct: 247 PEINYVVVKTGGNKYLVAEALLEEVSSVLEWENAEVVQTVPGKKLEYIVAKHPLYG--RD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH +P HG+DDFL+ + V+ + ++G + DA PG EGL
Sbjct: 305 SLVMLGDHVTTDSGTGCVHTSPGHGEDDFLIGKKYGLDVICAVDDKGMMTKDA-PGFEGL 363
Query: 597 ------NILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
+ + DQ L++ L HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 364 FYDKANKPICEALDQAGALLKLKFL-----THSYPHDWRTKKPVIFRATSQWFASVDMFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
+ L +EEVN+ P + + + I R WCISRQR WGVPIPVFY +G+ II E
Sbjct: 419 DDILKAVEEVNWTPVWGELRMHNMIRDRGDWCISRQRAWGVPIPVFYAENGEAIITEE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L +HG + W+ + LL + N K DI+D+WFDSG S VL
Sbjct: 478 IRHVSDLFRKHGSNVWFEREAKDLLPEGFTHPGSPNGVFKKETDIMDVWFDSGSSHQGVL 537
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+PA +Y+EG DQ GWF SSL+TSVA+ AP+ V HGFV+D +G KMSKS
Sbjct: 538 AAQEGLKRPADLYLEGSDQYRGWFNSSLITSVAVTGRAPYDGVLSHGFVLDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I LP K + G D++R WVA+
Sbjct: 598 LGNTI-----------LPG------------------KVVEQLGADIIRLWVAS-VDYQA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + IL + +KIR++ R++LG L++ + ++ R VD +ML +L +
Sbjct: 628 DVRVSNEILKQVSEVYRKIRNTFRFMLGNLNDFDPARHQVAYEELREVDRFMLVKLNKLV 687
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y +++A + NF +LS+FY KD LY + + R + L+
Sbjct: 688 KEVREAYERYEFATIYHAVNNFCATDLSSFYMDFAKDVLYIELADNPERRAMQTVLYECL 747
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPS 1018
L + ++PI+PH A+EV+ ++P
Sbjct: 748 VALTKLLSPILPHTADEVWQYIPG 771
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/402 (40%), Positives = 228/402 (56%), Gaps = 24/402 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y + G+P F+LHDGPPYANG H+GHA+NK LKDI R + G YVPGW
Sbjct: 35 DIYQKVMKRTEGRPLFVLHDGPPYANGDLHMGHALNKTLKDIINRFKSMTGYHAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE + +T K K +S + RK + +A E I+ Q+ F+ GV DWE N Y
Sbjct: 95 DTHGLPIE-QELTKKGVDRKSMSVAEFRKLCEKYAHEQIDRQRTAFKRLGVRGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T Y Q+ F + K+ YIY+ LKPVYWSPSS +ALA++E+EYK D S SIY+
Sbjct: 153 LTLRPAYEAEQIKVFGEMAKKGYIYKGLKPVYWSPSSESALADAEIEYK-DIKSPSIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L TD +IWTTTPW++P+N IA NP + Y V G +VA+ L+
Sbjct: 212 FDVKDGKGVL---DTDTKIVIWTTTPWTIPSNLGIAVNPEINYVVVKTGGNKYLVAEALL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E + + + EVV PG+ L+ I HP+ RD ++ V++ GTG VH +P
Sbjct: 269 EEVSSVLEWENAEVVQTVPGKKLEYIVAKHPLYG--RDSLVMLGDHVTTDSGTGCVHTSP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL------NILGDGKDQVLHLVEP 355
HG+DDFL+ + V+ + ++G + DA PG EGL + + DQ L++
Sbjct: 327 GHGEDDFLIGKKYGLDVICAVDDKGMMTKDA-PGFEGLFYDKANKPICEALDQAGALLKL 385
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 386 KFL-----THSYPHDWRTKKPVIFRATSQWFASVDMFRDDIL 422
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 15/163 (9%)
Query: 1109 ITNQGKYSPDAGPGLEGL------NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKK 1162
+ ++G + DA PG EGL + E DQ L++ L HSYP+DWRTKK
Sbjct: 347 VDDKGMMTKDA-PGFEGLFYDKANKPICEALDQAGALLKLKFL-----THSYPHDWRTKK 400
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI +A+ QWF + + + L +E VN+ P + + + I R WCISRQR WGVP
Sbjct: 401 PVIFRATSQWFASVDMFRDDILKAVEEVNWTPVWGELRMHNMIRDRGDWCISRQRAWGVP 460
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IPVFY +G+ II E I+H L +HG + W+ + LL
Sbjct: 461 IPVFYAENGEAIITEE-TIRHVSDLFRKHGSNVWFEREAKDLL 502
>gi|408790499|ref|ZP_11202118.1| Isoleucyl-tRNA synthetase [Lactobacillus florum 2F]
gi|408520223|gb|EKK20311.1| Isoleucyl-tRNA synthetase [Lactobacillus florum 2F]
Length = 933
Score = 355 bits (912), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 210/619 (33%), Positives = 319/619 (51%), Gaps = 55/619 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S + K+ L E D + ++WTTTPW++PA++ +
Sbjct: 191 SALAEAEIEYH-DVESPSAFFAEKVLDGKGVLDE--PDTYMIVWTTTPWTIPASEGVTIA 247
Query: 478 PALEYSVASVK---GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
P EYSV V+ + L ++ + ++ + PG+ L IT +HP + E
Sbjct: 248 PDFEYSVVQHDDDPNRYVLATELLQKDAELFGWKNVQTIKTVPGRALDRITALHPFD-EN 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+ L + FV++ GTG+VH AP +G+DD+L+ +P+ + N+G + AGP
Sbjct: 307 KQLVTMLGDFVTADAGTGMVHTAPGYGEDDYLIGKQYGLPIFAPVDNKGYLTKAAGPDFA 366
Query: 595 GLNILGDGKDQVLHLV--EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D L + + ++ Y+HSYP+DWRTKKPVI +A+ QWF ++I+ +
Sbjct: 367 GV-FYEDANQVALDKLKQQGQLIHYMPYKHSYPFDWRTKKPVIYRATPQWFASVDQIRDQ 425
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
LA +E V F P K+ L + I R W ISRQRVWGVP+P+FY D T I+ I H
Sbjct: 426 ILAAIETVTFRPSWGKQRLYNMIRDRGDWVISRQRVWGVPLPIFYAEDKTPIMTPETINH 485
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
LI +HG D W+ S ++LL + N + TK DI+D+WFDSG S VL +
Sbjct: 486 VADLIAKHGSDIWFEKSAQELLPAGFTSPHSPNGHFTKETDIMDVWFDSGSSHQGVLAQR 545
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y+EG DQ GWF SSL+TSVA AP+R + GF +D +G KMSKS+GN
Sbjct: 546 PELSYPADLYLEGSDQYRGWFNSSLITSVAFAKQAPYRQLVSEGFTLDGQGHKMSKSLGN 605
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
++ D+ + G D++R WV + D V
Sbjct: 606 TVAPADV-----------------------------IKQMGADIVRLWVTS-VDTDSDVR 635
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
+ D +KIR+++RYLL + ++S VD +++ +L + +
Sbjct: 636 VSMENFKKVSDGYKKIRNTIRYLLANTSDFEPDEDAVSYEQLNPVDQFIMIKLNQLITEV 695
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
T Y ++ + ++ L F+ +LSAFY KD LY DS N + R S L+ VL
Sbjct: 696 RTAYDQYDFMTVNKKLFQFITGDLSAFYLDFAKDILYIDSANSQRRRSMQTVLYQSLVVL 755
Query: 998 LRTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++ L
Sbjct: 756 TKLLTPIIPHTTEEIWQFL 774
Score = 273 bits (697), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 156/403 (38%), Positives = 229/403 (56%), Gaps = 15/403 (3%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR+ LN GKP F+LHDGPPYANG H+GHA+NKI KD+ +R + G R YVP
Sbjct: 34 NQLYE-QRQKLNEGKPTFVLHDGPPYANGDIHMGHALNKITKDLIVRYKSMSGYRAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLPIE LK K + RK ++AL+ ++ Q+AEF+ GV DW+H
Sbjct: 93 GWDTHGLPIEQQLKNAGYDRKQMDTNAFRKLCHDYALKQVDRQRAEFKRLGVTGDWDH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY ++ F + Q IY+ LKPV WS SS +ALAE+E+EY D S S +
Sbjct: 152 YLTLQPEYEAAEIRVFGKMAAQGLIYKGLKPVIWSWSSESALAEAEIEYH-DVESPSAFF 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK---GANVIVA 238
K+ L E D + ++WTTTPW++PA++ + P EYSV V+
Sbjct: 211 AEKVLDGKGVLDE--PDTYMIVWTTTPWTIPASEGVTIAPDFEYSVVQHDDDPNRYVLAT 268
Query: 239 KCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
+ L + + +++ + PG+ L IT +HP + E + L + FV++ GTG+VH
Sbjct: 269 ELLQKDAELFGWKNVQTIKTVPGRALDRITALHPFD-ENKQLVTMLGDFVTADAGTGMVH 327
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV--EPD 356
AP +G+DD+L+ +P+ + N+G + AGP G+ D L + +
Sbjct: 328 TAPGYGEDDYLIGKQYGLPIFAPVDNKGYLTKAAGPDFAGV-FYEDANQVALDKLKQQGQ 386
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
++ Y+HSYP+DWRTKKPVI +A+ QWF ++I+ + L
Sbjct: 387 LIHYMPYKHSYPFDWRTKKPVIYRATPQWFASVDQIRDQILAA 429
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLH---LVEPDVLWTENYQHSYPYDWRTKKPVI 1165
+ N+G + AGP G + E +QV + ++ Y+HSYP+DWRTKKPVI
Sbjct: 351 VDNKGYLTKAAGPDFAG--VFYEDANQVALDKLKQQGQLIHYMPYKHSYPFDWRTKKPVI 408
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
+A+ QWF ++I+ + LA +E V F P K+ L + I R W ISRQRVWGVP+P+
Sbjct: 409 YRATPQWFASVDQIRDQILAAIETVTFRPSWGKQRLYNMIRDRGDWVISRQRVWGVPLPI 468
Query: 1226 FYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY D T I+ I H LI +HG D W+ ++LL
Sbjct: 469 FYAEDKTPIMTPETINHVADLIAKHGSDIWFEKSAQELL 507
>gi|452848000|gb|EME49932.1| hypothetical protein DOTSEDRAFT_50096 [Dothistroma septosporum NZE10]
Length = 1113
Score = 355 bits (912), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 237/676 (35%), Positives = 353/676 (52%), Gaps = 66/676 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPA----HLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY H + ++K+ ++PA H +++ ALIWTTTPW+LPAN+
Sbjct: 255 TALAEAELEYDDSHRCTAAFVKLPFTRLPAVLQRHPSVSPSNISALIWTTTPWTLPANKA 314
Query: 474 IAFNPALEYSVASV--------KGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQ 522
+A +EY VA + + VIVAK +E+++ D + G L
Sbjct: 315 VAVKDDIEYVVAEISSIPNQASRKEQVIVAKDRIEHVQLHLTEDRTISSLTESIRGSELA 374
Query: 523 DITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI-PVLNLITN 581
D + +L A FV+S+ GTGLVH AP HG DD+ + L + + P L + +
Sbjct: 375 DGNASCYNLFTGTESPILQAEFVTSTTGTGLVHMAPGHGMDDYQICLQKGVGPALAPVDD 434
Query: 582 QGKYSPDAGP-----GLEGLNILGDGKDQVLHLVE-PDVLWTENYQHSY----------- 624
+G+Y+ DA P +GL++ +G VL ++ P ++ +HS+
Sbjct: 435 EGRYTADAFPVGKSEKFKGLDVQTEGVQAVLDVLNHPGQYVPQDARHSHGSLLVAAHKFV 494
Query: 625 ---PYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYW 681
P DWRTK+PVI++A+ QWF+D IK AL LE+V F+PES K LR + R W
Sbjct: 495 HKNPIDWRTKQPVIVRATAQWFVDASAIKDRALMALEDVTFIPESGKNRLRSFVEGRSQW 554
Query: 682 CISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVE--QLLNTS 736
CISRQR WGVPIP Y G+ I +E+ I H ++I++ G D W+S V+ L++S
Sbjct: 555 CISRQRAWGVPIPAMYHVETGEACITDES-ISHIISVIEKRGIDAWFSDPVDASSWLHSS 613
Query: 737 DVNSNVTKSNDILDIWFDSGISWSHVLK----DKPAHVYMEGMDQINGWFMSSLLTSVAL 792
+ D +D+WFDSG +W+ + + + VY+EG DQ GWF SSLLT+VA
Sbjct: 614 LEPGKWIRGKDTMDVWFDSGTTWTSLRSRHEGSRLSDVYVEGSDQHRGWFQSSLLTAVAT 673
Query: 793 -----KHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGA--KKLPAYEKSVGNV 845
+ APFR + HGF +D +G KMSKS+GNVIS +I G+ K+
Sbjct: 674 LDSNSRPMAPFRLLATHGFTLDGEGRKMSKSLGNVISPDEIISGSLLTAPRGKNKNRSKK 733
Query: 846 ISAHDITQGAK-KLPAYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLR 902
+ T G+K K G D+LR WV AS D T V I + +L S Q + K R + +
Sbjct: 734 QAPTGSTPGSKTKDSTLGPDILRLWV---ASSDYTRDVSISQPVLQSVQQALSKYRITCK 790
Query: 903 YLLGVLHN---HSESTGSISR--YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFV 957
+LLGVLH+ H+ + +S + D +L +L + +G++++ + FV
Sbjct: 791 FLLGVLHDYPTHAPALELLSELDFADRVVLHQLARCSKAVFDAFGDYKFYAGINEINKFV 850
Query: 958 VNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
N+LS FYF ++KDR Y + R L + L++ +AP PHL EEV++ LP
Sbjct: 851 SNDLSTFYFEIIKDRCYTGTT--PVRRHTQTVLVVVLQELMKMLAPATPHLIEEVWAWLP 908
Query: 1018 SRQGTFSSFCHFKVYL 1033
+ S + L
Sbjct: 909 EQMAGKSGVSARDISL 924
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/469 (37%), Positives = 250/469 (53%), Gaps = 78/469 (16%)
Query: 6 ELYSWQR---------------EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLR 50
+LY+WQR E ++ EF+LHDGPPYANG H+GHA+NK+LKD+ LR
Sbjct: 64 DLYTWQRADRPRTIVCERGGTREEVDN--EFVLHDGPPYANGAVHVGHALNKVLKDLMLR 121
Query: 51 SNLLQGKRVHYVPGWDCHGLPIELKAITS-----------KDK-------------LLSP 86
+ L +GKRV Y PGWDCHGLPIELKA+ KD ++
Sbjct: 122 TELGRGKRVQYRPGWDCHGLPIELKALQQPKAPDQKAKAPKDSPSQEAKAAAAASSKMTA 181
Query: 87 LDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYI 146
+IR A+ A ETI QK F WGV+ +W+ Y T D+++ QL F + ++ I
Sbjct: 182 TEIRTAARKLASETIEMQKKSFCEWGVMGEWDAP-YMTMDRDFEMRQLGVFKEMVRKGLI 240
Query: 147 YRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPA----HLLEGATDLHAL 202
R +PVYWSPSSRTALAE+ELEY H + ++K+ ++PA H +++ AL
Sbjct: 241 SRHHRPVYWSPSSRTALAEAELEYDDSHRCTAAFVKLPFTRLPAVLQRHPSVSPSNISAL 300
Query: 203 IWTTTPWSLPANQFIAFNPALEYSVASV--------KGANVIVAKCLVESLKWTFQTDIE 254
IWTTTPW+LPAN+ +A +EY VA + + VIVAK +E ++ D
Sbjct: 301 IWTTTPWTLPANKAVAVKDDIEYVVAEISSIPNQASRKEQVIVAKDRIEHVQLHLTEDRT 360
Query: 255 VVC---DFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 311
+ G L D + +L A FV+S+ GTGLVH AP HG DD+ +
Sbjct: 361 ISSLTESIRGSELADGNASCYNLFTGTESPILQAEFVTSTTGTGLVHMAPGHGMDDYQIC 420
Query: 312 LAEKI-PVLNLITNQGKYSPDAGP-----GLEGLNILGDGKDQVLHLVE-PDVLWTENYQ 364
L + + P L + ++G+Y+ DA P +GL++ +G VL ++ P ++ +
Sbjct: 421 LQKGVGPALAPVDDEGRYTADAFPVGKSEKFKGLDVQTEGVQAVLDVLNHPGQYVPQDAR 480
Query: 365 HSY--------------PYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
HS+ P DWRTK+PVI++A+ QWF+D IK AL+
Sbjct: 481 HSHGSLLVAAHKFVHKNPIDWRTKQPVIVRATAQWFVDASAIKDRALMA 529
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 133/265 (50%), Gaps = 41/265 (15%)
Query: 1028 HFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS-- 1085
H +++L +I+ +SI G G + +N+F T +PI+ AE V S
Sbjct: 350 HVQLHLTEDRTISS---LTESIRGSELADGNASCYNLF---TGTESPILQ--AEFVTSTT 401
Query: 1086 -----HLPSRQGTFS-SFCHFK-VYHHLNLITNQGKYSPDAGP-----GLEGLNILGEGK 1133
H+ G C K V L + ++G+Y+ DA P +GL++ EG
Sbjct: 402 GTGLVHMAPGHGMDDYQICLQKGVGPALAPVDDEGRYTADAFPVGKSEKFKGLDVQTEGV 461
Query: 1134 DQVLHLVE-PDVLWTENYQHSY--------------PYDWRTKKPVILKASQQWFIDTER 1178
VL ++ P ++ +HS+ P DWRTK+PVI++A+ QWF+D
Sbjct: 462 QAVLDVLNHPGQYVPQDARHSHGSLLVAAHKFVHKNPIDWRTKQPVIVRATAQWFVDASA 521
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY---DGDTIIVN 1235
IK AL LE V F+PES K LR + R WCISRQR WGVPIP Y G+ I +
Sbjct: 522 IKDRALMALEDVTFIPESGKNRLRSFVEGRSQWCISRQRAWGVPIPAMYHVETGEACITD 581
Query: 1236 EANIKHFCTLIDEHGPDFWWSLPVE 1260
E+ I H ++I++ G D W+S PV+
Sbjct: 582 ES-ISHIISVIEKRGIDAWFSDPVD 605
>gi|334341797|ref|YP_004546777.1| isoleucyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334093151|gb|AEG61491.1| isoleucyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 931
Score = 355 bits (912), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 217/623 (34%), Positives = 322/623 (51%), Gaps = 61/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY D S SIY+K + + L E D +IWTTTPW+LPAN I+ +
Sbjct: 193 TALAEAEVEYG-DKTSPSIYVKFPVKEGKGILPE---DAAVVIWTTTPWTLPANVAISVH 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P EY +A VKG V+VAK L+E K + + +++ F G+ L + HP RD
Sbjct: 249 PEFEYVLARVKGQKVVVAKELLEAFKEVMEAEEAEILATFKGEQLDRVVCRHPFV--DRD 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG++DFL A +PVL+ + N+GK++ + G +G
Sbjct: 307 SLVILGEHVTLDAGTGCVHTAPGHGEEDFLAAKQYGLPVLSPLDNRGKFTAEGGK-FQGQ 365
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
IL K + L E +L N +H YP+ WR K+PV +A++QWF E + E L
Sbjct: 366 FILDANKSVIEELQEQGALLGLGNIKHQYPHCWRCKQPVFFRATEQWFASVEGFRRETLQ 425
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG--DTIIVNEANIKHFC 713
+ + +VP + + + + R WC+SRQR+WGVPIP+FY I+ E I H
Sbjct: 426 AIRNIKWVPAWGEDRIYNMVEGRGDWCVSRQRIWGVPIPIFYCNHCGKEIITEETIAHIQ 485
Query: 714 TLIDEHGPDFWWSLSVEQLL------NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD-- 765
L EHG D W++ +L+ + + K DI+D+WFDSG S VL
Sbjct: 486 QLFKEHGSDIWFAKEANELVPPGLNCHHCGKGGDFRKETDIMDVWFDSGSSHLAVLDQPE 545
Query: 766 ------KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+PA +Y+EG DQ GWF SSL TSVA+ P++ V HGF VDEKG KMSKS+
Sbjct: 546 LWPELQRPADLYLEGSDQHRGWFNSSLSTSVAVTGKPPYKTVLTHGFTVDEKGRKMSKSL 605
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ I + G D+LR WV++ A
Sbjct: 606 GNVVDPLKI-----------------------------INQMGADILRLWVSS-ADYRGD 635
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKR--LCEFQNTM 937
+ + +NIL + +KIR++ R+LLG L++ + ++ Y D+ L R L E +
Sbjct: 636 LALSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVA-YRDLPELDRVALMELNKLI 694
Query: 938 DTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y ++++ + N+ V +LSAFY ++KDRLY R + L +
Sbjct: 695 KRVLAAYEDYEFHVVYHAIHNYCVLDLSAFYLDIIKDRLYTAVPASLERRAAQTVLCEVL 754
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
L+R + P++ EE+Y H+P
Sbjct: 755 DALVRLLVPVLTFTTEEIYRHMP 777
Score = 296 bits (758), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 233/396 (58%), Gaps = 13/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY+ +E GK ++ILHDGPPYANG H+GH +NK+LKD+ ++ ++G YVPGWD
Sbjct: 37 LYNKVQEKNKGKTKYILHDGPPYANGHIHLGHTLNKVLKDMVVKYRSMRGYDAPYVPGWD 96
Query: 67 CHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +KA+ + P++ R K K++AL+ N Q EF+ GV DWE Y+
Sbjct: 97 THGLPIEQQAIKALGINRHQVDPVEFRNKCKDYALKFANIQSEEFQRLGVRGDWERP-YY 155
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T +Y Q+ F + K+ YIY+ LKPVYW S TALAE+E+EY D S SIY+K
Sbjct: 156 TLLPQYEATQVRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEVEYG-DKTSPSIYVKF 214
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ + L E D +IWTTTPW+LPAN I+ +P EY +A VKG V+VAK L+E
Sbjct: 215 PVKEGKGILPE---DAAVVIWTTTPWTLPANVAISVHPEFEYVLARVKGQKVVVAKELLE 271
Query: 244 SLKWTFQT-DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ K + + E++ F G+ L + HP RD ++ V+ GTG VH AP
Sbjct: 272 AFKEVMEAEEAEILATFKGEQLDRVVCRHPFV--DRDSLVILGEHVTLDAGTGCVHTAPG 329
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTE 361
HG++DFL A +PVL+ + N+GK++ + G +G IL K + L E +L
Sbjct: 330 HGEEDFLAAKQYGLPVLSPLDNRGKFTAEGGK-FQGQFILDANKSVIEELQEQGALLGLG 388
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N +H YP+ WR K+PV +A++QWF E + E L
Sbjct: 389 NIKHQYPHCWRCKQPVFFRATEQWFASVEGFRRETL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPV 1164
L+ + N+GK++ + G +G IL K + L E +L N +H YP+ WR K+PV
Sbjct: 346 LSPLDNRGKFTAEGGK-FQGQFILDANKSVIEELQEQGALLGLGNIKHQYPHCWRCKQPV 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
+A++QWF E + E L + + +VP + + + + R WC+SRQR+WGVPIP
Sbjct: 405 FFRATEQWFASVEGFRRETLQAIRNIKWVPAWGEDRIYNMVEGRGDWCVSRQRIWGVPIP 464
Query: 1225 VFYDG--DTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY I+ E I H L EHG D W++ +L+
Sbjct: 465 IFYCNHCGKEIITEETIAHIQQLFKEHGSDIWFAKEANELV 505
>gi|421873605|ref|ZP_16305217.1| isoleucyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
gi|372457392|emb|CCF14766.1| isoleucyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
Length = 928
Score = 355 bits (911), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 220/617 (35%), Positives = 320/617 (51%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EY D S SIY++ + L + D +IWTTTPW+LPAN+ I+ N
Sbjct: 194 TALADAEIEYH-DKRSASIYVRFMVKDGKGKLDQ---DTGVIIWTTTPWTLPANKAISLN 249
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P LEYSV G +VA LVE++ K ++ V F G L+ I HP R
Sbjct: 250 PDLEYSVVLADGNKYLVASGLVESVTKEIGWEQVETVQTFKGTDLEGIETQHPFY--DRI 307
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG+DDF ++ I VL + ++GK + +A PG EGL
Sbjct: 308 SPIILGDHVTLDAGTGCVHTAPGHGEDDFNVSKKYNIEVLCPVDHEGKMTQEA-PGFEGL 366
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKP+I +A++QWF E + + L
Sbjct: 367 FYEDANKVVSEKLKENGALLKLSFITHSYPHDWRTKKPIIFRATEQWFASVEGFRSQMLE 426
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++EV + P + L + +A R WCISRQRVWGVPIP+FY + I+NE I H
Sbjct: 427 AIKEVKWTPHWGETRLANMVADRNDWCISRQRVWGVPIPIFYCKACNEPIINEQTIDHIA 486
Query: 714 TLIDEHGPDFWWSLSVEQLLN---TSDVN-SNVTKSNDILDIWFDSGISWSHVLKDK--- 766
L + G W++ L+ T D K DI+D+WFDSG S VL+ +
Sbjct: 487 NLFAKEGSGVWFAREAADLIPAGLTCDCGCKEFRKETDIMDVWFDSGSSHEAVLRQRDNL 546
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSL TSVA+ AP++++ HGF +D +G KMSKS+GN I
Sbjct: 547 SWPADLYLEGSDQYRGWFNSSLSTSVAVHGKAPYKSILSHGFTLDGEGRKMSKSLGNTIV 606
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
++T G D+LR WV++ I
Sbjct: 607 PKEVTD-----------------------------KLGADILRLWVSS-VDYQSDHRISD 636
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTL 940
IL + + +KIR++ R+LLG L + +D +ML + E
Sbjct: 637 AILAQNAEVYRKIRNTFRFLLGNLAGFDPMKDRVEYDRLPELDRFMLAKAAEMVKRTRKA 696
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y E+Q+ + + NF ELS+FY + KDRLY ++ + E R + +++I L++
Sbjct: 697 YDEYQFHTVYQTVHNFCTIELSSFYMDISKDRLYVEAPDSEERRAAQTVMYDILLDLVKL 756
Query: 1001 VAPIMPHLAEEVYSHLP 1017
++PI+PH A+EV+ +P
Sbjct: 757 LSPIIPHTADEVWQFIP 773
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 226/398 (56%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y E +P FILHDGPPYANG HIGH++NK LKDI +R + G Y+PGW
Sbjct: 37 DIYKQVLERTKDRPSFILHDGPPYANGDIHIGHSLNKTLKDIIVRYKSMAGFYAPYIPGW 96
Query: 66 DCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
D HGLPIE +AI + KL + D RK+ + +A +N Q+ +F+ G+ DWE N
Sbjct: 97 DTHGLPIE-QAIVNAQKLDRRNIEVNDFRKRCEEYAWGYVNKQRDQFKRLGIRGDWE-NP 154
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY Q+ F + + YIY+ L+ VYWSPSS TALA++E+EY D S SIY+
Sbjct: 155 YVTLLPEYEAAQIRVFGAMATKGYIYKGLRCVYWSPSSETALADAEIEYH-DKRSASIYV 213
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + L + D +IWTTTPW+LPAN+ I+ NP LEYSV G +VA L
Sbjct: 214 RFMVKDGKGKLDQ---DTGVIIWTTTPWTLPANKAISLNPDLEYSVVLADGNKYLVASGL 270
Query: 242 VESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
VES+ K +E V F G L+ I HP R ++ V+ GTG VH A
Sbjct: 271 VESVTKEIGWEQVETVQTFKGTDLEGIETQHPFY--DRISPIILGDHVTLDAGTGCVHTA 328
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDF ++ I VL + ++GK + +A PG EGL K L E L
Sbjct: 329 PGHGEDDFNVSKKYNIEVLCPVDHEGKMTQEA-PGFEGLFYEDANKVVSEKLKENGALLK 387
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKP+I +A++QWF E + + L
Sbjct: 388 LSFITHSYPHDWRTKKPIIFRATEQWFASVEGFRSQML 425
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++GK + +A PG EGL K L E L ++ HSYP+DWRTKKP+I +
Sbjct: 350 VDHEGKMTQEA-PGFEGLFYEDANKVVSEKLKENGALLKLSFITHSYPHDWRTKKPIIFR 408
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF E + + L ++ V + P + L + +A R WCISRQRVWGVPIP+FY
Sbjct: 409 ATEQWFASVEGFRSQMLEAIKEVKWTPHWGETRLANMVADRNDWCISRQRVWGVPIPIFY 468
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ I+NE I H L + G W++ L+
Sbjct: 469 CKACNEPIINEQTIDHIANLFAKEGSGVWFAREAADLI 506
>gi|220929274|ref|YP_002506183.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
gi|219999602|gb|ACL76203.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
Length = 929
Score = 355 bits (911), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 209/622 (33%), Positives = 329/622 (52%), Gaps = 55/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFI 474
TALAE+E+EY D + SIY+K ++ + EG ++ +IWTTT W+LPAN I
Sbjct: 194 TALAEAEIEY-ADDTTVSIYVKFQVRDDKG-IFEGVAPKEKVNFVIWTTTTWTLPANLAI 251
Query: 475 AFNPALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
N + EYSV ++A LVEN +K T+ + V F G L+ I HP
Sbjct: 252 CLNESFEYSVVKANDEYYVLAAELVENTMKAAAVTEYETVAKFKGSQLEGILCKHPF--L 309
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+D ++ V+ GTG VH AP HG +DF++ KIPVL + ++G + +AGP
Sbjct: 310 DKDSIVILGDHVTLEAGTGCVHTAPGHGAEDFIVCQKYKIPVLVPVDSKGFLTKEAGP-F 368
Query: 594 EGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ + L + +L +E H YP+ WR K P+I +A++QWF + + E
Sbjct: 369 AGMFYKKSNSAIIEKLTQDGRLLASEKITHQYPHCWRCKDPIIFRATEQWFASIDGFRQE 428
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
+L +++V ++PE ++ + + + R WCISRQR+WGVPIP+FY D ++ + +IK
Sbjct: 429 SLKAIKDVKWIPEWGEERITNMVRDRGDWCISRQRIWGVPIPIFYCKDCGKELITDESIK 488
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L G + W+++ ++L N TK DI+D+WFDSG S VL+++
Sbjct: 489 AVADLFRVKGSNAWYAMDASEILPDGIKCKCGNHEFTKETDIMDVWFDSGSSHVAVLENR 548
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLTSVA K TAP+R V HG+VVD +G KMSKS+GN
Sbjct: 549 EGLSWPADLYLEGNDQHRGWFQSSLLTSVATKGTAPYRKVLTHGYVVDGEGRKMSKSLGN 608
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I D+ + YG D+LR WVA+ + +
Sbjct: 609 GIDPADV-----------------------------IKEYGADILRLWVAS-SDYTTDIR 638
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I K++L + +KIR++ RY+LG +++ + T S+ +D + L R+ +
Sbjct: 639 ISKDLLKQLSEVYRKIRNTARYILGNINDFNPDTDSVDYNDLNELDKWALGRMTNLIKKV 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y +++ + NF V ++S FY ++KDRLY + + R + ++ I H L
Sbjct: 699 NEAYDTYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSKPDTKERRAAQTVMYEILHNL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSR 1019
+R + P++ EE++ ++P R
Sbjct: 759 VRMLTPVLAFTTEEIWQYMPHR 780
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 223/400 (55%), Gaps = 14/400 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y+ Q + GKP FILHDGPPYANG H+G +NK+LKDI ++ + G YVPGW
Sbjct: 37 DIYNTQLKKSEGKPSFILHDGPPYANGGIHLGTTLNKVLKDIVVKYKSMSGYYTPYVPGW 96
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +AI K + P+ R+ + FAL+ ++ Q+ F+ GV ADWEH Y
Sbjct: 97 DTHGLPIEQRAIKELGLKRHEVGPVVFREACEGFALKYLDVQRESFKRLGVRADWEHP-Y 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + + +IY+ LKPVYW P TALAE+E+EY D + SIY+K
Sbjct: 156 ITLKPEFEAKQIEVFGEMATKGHIYKGLKPVYWCPECETALAEAEIEY-ADDTTVSIYVK 214
Query: 183 IKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
++ + EG ++ +IWTTT W+LPAN I N + EYSV ++A
Sbjct: 215 FQVRDDKG-IFEGVAPKEKVNFVIWTTTTWTLPANLAICLNESFEYSVVKANDEYYVLAA 273
Query: 240 CLVE-SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
LVE ++K T+ E V F G L+ I HP +D ++ V+ GTG VH
Sbjct: 274 ELVENTMKAAAVTEYETVAKFKGSQLEGILCKHPF--LDKDSIVILGDHVTLEAGTGCVH 331
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-V 357
AP HG +DF++ KIPVL + ++G + +AGP G+ + L + +
Sbjct: 332 TAPGHGAEDFIVCQKYKIPVLVPVDSKGFLTKEAGP-FAGMFYKKSNSAIIEKLTQDGRL 390
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L +E H YP+ WR K P+I +A++QWF + + E+L
Sbjct: 391 LASEKITHQYPHCWRCKDPIIFRATEQWFASIDGFRQESL 430
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 89/159 (55%), Gaps = 6/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G + +AGP G+ + ++ + D +L +E H YP+ WR K P+I
Sbjct: 355 VDSKGFLTKEAGP-FAGM-FYKKSNSAIIEKLTQDGRLLASEKITHQYPHCWRCKDPIIF 412
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + E+L ++ V ++PE ++ + + + R WCISRQR+WGVPIP+F
Sbjct: 413 RATEQWFASIDGFRQESLKAIKDVKWIPEWGEERITNMVRDRGDWCISRQRIWGVPIPIF 472
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D ++ + +IK L G + W+++ ++L
Sbjct: 473 YCKDCGKELITDESIKAVADLFRVKGSNAWYAMDASEIL 511
>gi|420198979|ref|ZP_14704663.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM031]
gi|394272665|gb|EJE17115.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM031]
Length = 916
Score = 355 bits (911), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 326/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY ++ + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIENKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 230/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EEVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|227529019|ref|ZP_03959068.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
gi|227351031|gb|EEJ41322.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
Length = 931
Score = 355 bits (911), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 218/622 (35%), Positives = 328/622 (52%), Gaps = 63/622 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +K+ + ++ L +D + ++WTTTPW++PA++ +A N
Sbjct: 191 SALAEAEVEYH-DVTAKTAFFVEQVKDGKGVL---DSDTYLVVWTTTPWTVPASEAVAVN 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
+YSV VK AN +VA L+E L D VV G+ L+ +T HP
Sbjct: 247 AKFDYSV--VKPANDDRKFVVATELLEGLAEKLGWDDYQVVKHVAGKDLEGLTTQHPY-- 302
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+L + A +V++ GTGLVH AP +G DD+ +P+ I +QG + + G
Sbjct: 303 LDRELLVGVADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGDD 362
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
+G+ D L +E + +L E +HSYP+DWRTKKP+I +A+ QWF+ E+++
Sbjct: 363 FDGV-FYQKADDISLQKLEDNNALLLEEPLKHSYPFDWRTKKPIIFRATDQWFVSIEKMR 421
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
L LE V + PE K LR+ I R W ISRQRVWGVP+P+FY D T I+ E I
Sbjct: 422 QNILDALENVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIMEEETI 481
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L ++G + W+ + LL N + TK DI+D+WFDSG S VL
Sbjct: 482 NHVADLFRKYGSNVWFERDAKDLLPEGYTNEHSPHGKFTKETDIMDVWFDSGSSHQGVLA 541
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSV AP++ + GF +D++G KMSKS
Sbjct: 542 ERDYLTYPADLYLEGSDQYRGWFNSSLITSVVCSGHAPYKEIVSQGFTLDKRGNKMSKSQ 601
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDP 878
GNVI + + Q G +++R WV +A S D
Sbjct: 602 GNVIDPNKVVQ-----------------------------QMGAEIIRLWVMSADTSADV 632
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V +G + +K+R++ R+LL + + S ++S VD YML +L F
Sbjct: 633 RVSMG--TFQQISEAYRKLRNTFRFLLANTSDFNASENTVSYEYMSSVDQYMLVKLNHFL 690
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
M + + + A R+L+NFV N+LSAFY + KD LY + N + R S ++I
Sbjct: 691 EKMRADFDNYDFLDAYRLLINFVNNDLSAFYMNVAKDVLYIEPENSQTRRSMQTVFYDIL 750
Query: 995 HVLLRTVAPIMPHLAEEVYSHL 1016
+++ + PI+PH EEV+S++
Sbjct: 751 LTMVKLLTPILPHTTEEVWSYM 772
Score = 270 bits (689), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/396 (40%), Positives = 227/396 (57%), Gaps = 20/396 (5%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP FILHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HGL
Sbjct: 40 RQKLNEGKPTFILHDGPPYANGNIHIGHAMNKISKDFIVRYKSMSGFRSPYVPGWDTHGL 99
Query: 71 PIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE L K +S + R + +ALE ++ Q+ +F+ GV DW H Y T DKE
Sbjct: 100 PIEHQLTKAGYDRKKMSLTEFRDLCRKYALEQVDKQRKDFKRLGVSGDWNH-PYLTLDKE 158
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D +K+ + ++
Sbjct: 159 FEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVTAKTAFFVEQVKDG 217
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVES 244
L +D + ++WTTTPW++PA++ +A N +YSV VK AN +VA L+E
Sbjct: 218 KGVL---DSDTYLVVWTTTPWTVPASEAVAVNAKFDYSV--VKPANDDRKFVVATELLEG 272
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
L D +VV G+ L+ +T HP R+L + A +V++ GTGLVH AP +
Sbjct: 273 LAEKLGWDDYQVVKHVAGKDLEGLTTQHPY--LDRELLVGVADYVTADAGTGLVHTAPGY 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
G DD+ +P+ I +QG + + G +G+ D L +E + +L E
Sbjct: 331 GDDDYNFGKKYDLPIFAPINDQGVLTKENGDDFDGV-FYQKADDISLQKLEDNNALLLEE 389
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+HSYP+DWRTKKP+I +A+ QWF+ E+++ L
Sbjct: 390 PLKHSYPFDWRTKKPIIFRATDQWFVSIEKMRQNIL 425
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I +QG + + G +G+ + D L +E + +L E +HSYP+DWRTKKP+I
Sbjct: 349 INDQGVLTKENGDDFDGV-FYQKADDISLQKLEDNNALLLEEPLKHSYPFDWRTKKPIIF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ E+++ L LE V + PE K LR+ I R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIEKMRQNILDALENVKYHPEWGKVRLRNMIKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L ++G + W+ + LL
Sbjct: 468 YAEDGTPIMEEETINHVADLFRKYGSNVWFERDAKDLL 505
>gi|392867100|gb|EAS29707.2| isoleucine-tRNA ligase [Coccidioides immitis RS]
Length = 1012
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 217/644 (33%), Positives = 332/644 (51%), Gaps = 58/644 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPA----HLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY+ DH+S + +K L VP H L +++A+IWTTTPW+LPAN
Sbjct: 200 TALAEAELEYRDDHVSHAALVKFPLATVPTEIREHPLASGDEIYAVIWTTTPWTLPANAA 259
Query: 474 IAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
IA + L Y V S + +++A+ E ++ + + V+ G L TY P+ K
Sbjct: 260 IAVSKDLNYIIVQSERHGKLLIAESRREYVEQLLEESLKVLMSVAGTSLLSSTY-RPLFK 318
Query: 533 EQRD--LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+ ++ A FV+ G+GLVHCAP HG +D+ + L + + +G+++ A
Sbjct: 319 DTDGSCQPVIAADFVTDESGSGLVHCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAAM 378
Query: 591 PG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
P L G ++L +G V+ +E + +L Y+H YPYDWR+K PVI++A++QWF
Sbjct: 379 PSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWFA 438
Query: 645 DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGDT 701
D I+ +A++ L V FVP+S K L + R WCISRQR WGVPIP Y G+
Sbjct: 439 DVGDIRQQAVSALLNVRFVPQSGKARLEAFVKNRTEWCISRQRAWGVPIPALYHRGTGEA 498
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL----NTSD-VNSNVTKSNDILDIWFDSG 756
++ E+ + H +I + G D WW+ + + + D + D +D+WFDSG
Sbjct: 499 VLTRES-VTHIMDVIKQRGIDAWWTDNEHDIAWIPPSLRDPAGPGYARGTDTMDVWFDSG 557
Query: 757 ISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK--------HTAPFRNVFL 803
SW+ + ++ + +Y+EG DQ GWF SSLLT +A + APF+ +
Sbjct: 558 TSWTQMKENDGIESTRSDMYLEGTDQHRGWFQSSLLTHIAHQLAKGSKGHFKAPFKTLVT 617
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP---- 859
HGF +D G KMSKS+GN++ H+I G P K +GAK+ P
Sbjct: 618 HGFTLDHAGRKMSKSIGNIVHPHEIMNGTLLPPLKIKKA----------KGAKEKPTAPV 667
Query: 860 --AYGVDVLRWWVA-AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG 916
A G D LR WVA + +KD V IG+ IL ++ + K R + R +LG L +
Sbjct: 668 YDALGPDALRLWVAGSDYTKD--VVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKNQ 725
Query: 917 ---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
R D L +L + ++ +A + + + SAFY +KDRL
Sbjct: 726 IPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDRL 785
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
Y DS +G +R + T+ +I+ L + P++P L EE + H P
Sbjct: 786 YADSTDGLSRRAAQTTIFHIYSHLQSILGPLVPLLVEESWEHTP 829
Score = 333 bits (854), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/409 (43%), Positives = 249/409 (60%), Gaps = 19/409 (4%)
Query: 6 ELYSWQREALNG-KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY+WQR +F+LHDGPPYANG HIGHA+NKILKDI R L +GKRV Y+PG
Sbjct: 42 DLYAWQRRQRPADSAQFVLHDGPPYANGDLHIGHALNKILKDIICRVQLAKGKRVEYIPG 101
Query: 65 WDCHGLPIELKAITSKDKL---LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WDCHGLPIELKA+ SK+++ L P +IR A+ A ET+ Q F WGV+ DWE N
Sbjct: 102 WDCHGLPIELKALNSKNQVGKDLGPANIRAIARQLAEETVVKQMKGFREWGVMGDWE-NY 160
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
+ T DKE+ QL F + + IYR KPVYWSPS+RTALAE+ELEY+ DHVS + +
Sbjct: 161 WKTMDKEFEMRQLEVFLEMVDKGLIYRRYKPVYWSPSTRTALAEAELEYRDDHVSHAALV 220
Query: 182 KIKLNQVPA----HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEY-SVASVKGANVI 236
K L VP H L +++A+IWTTTPW+LPAN IA + L Y V S + ++
Sbjct: 221 KFPLATVPTEIREHPLASGDEIYAVIWTTTPWTLPANAAIAVSKDLNYIIVQSERHGKLL 280
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRD--LKLLPAGFVSSSKGT 294
+A+ E ++ + ++V+ G L TY P+ K+ ++ A FV+ G+
Sbjct: 281 IAESRREYVEQLLEESLKVLMSVAGTSLLSSTY-RPLFKDTDGSCQPVIAADFVTDESGS 339
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVL 350
GLVHCAP HG +D+ + L + + +G+++ A P L G ++L +G V+
Sbjct: 340 GLVHCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVV 399
Query: 351 HLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+E + +L Y+H YPYDWR+K PVI++A++QWF D I+ +A+
Sbjct: 400 KYLEEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWFADVGDIRQQAV 448
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ +G+++ A P L G ++L EG V+ +E + +L Y+H YPYDWR+K
Sbjct: 367 VDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKHKYPYDWRSKL 426
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ +A++ L V FVP+S K L + R WCISRQR WGVP
Sbjct: 427 PVIIRATEQWFADVGDIRQQAVSALLNVRFVPQSGKARLEAFVKNRTEWCISRQRAWGVP 486
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ ++ E+ + H +I + G D WW+
Sbjct: 487 IPALYHRGTGEAVLTRES-VTHIMDVIKQRGIDAWWT 522
>gi|347549417|ref|YP_004855745.1| putative isoleucyl-tRNA synthetase [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346982488|emb|CBW86486.1| Putative isoleucyl-tRNA synthetase [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 921
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 226/620 (36%), Positives = 327/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ +LE T++ +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKKSASIFVAFKVTDGKG-VLEPGTNI--VIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D V+ G L + HP R
Sbjct: 247 PDLDYVVLESAGEKYVVAEALLPSLREKLGFE-DAVVLKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ D PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYNLEVLAPLDDRGVFT-DEAPGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 EAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TISHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ +P+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAVTGESPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP G VI K+L G D++R WVA+ V +
Sbjct: 602 I-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T S+S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNSVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSPDRRAMQTVFYESVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHLPS 1018
+ +API+PH EEV++ L S
Sbjct: 752 KLLAPILPHTTEEVWNSLNS 771
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 226/398 (56%), Gaps = 16/398 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAGRPSYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSVAEFRKLCAEYAMTQVDGQRTGFKRLGISGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITMLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKKSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ +LE T++ +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKG-VLEPGTNI--VIWTTTPWTIPANMGITVNPDLDYVVLESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D V+ G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DAVVLKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ D PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYNLEVLAPLDDRGVFT-DEAPGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLL 422
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ D PG EG+ K L E L + HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFT-DEAPGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ VN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATAQWFASIDAFRDDLLEAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TISHISELFREHGSNVWFERDVKDLL 502
>gi|416124403|ref|ZP_11595399.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
gi|418329220|ref|ZP_12940299.1| isoleucine--tRNA ligase [Staphylococcus epidermidis 14.1.R1.SE]
gi|319401513|gb|EFV89723.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
gi|365230882|gb|EHM71957.1| isoleucine--tRNA ligase [Staphylococcus epidermidis 14.1.R1.SE]
Length = 916
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 230/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EEVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|406036574|ref|ZP_11043938.1| isoleucyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 945
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 227/673 (33%), Positives = 350/673 (52%), Gaps = 78/673 (11%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + +++G I + G H PG +ALAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSLGAI-AKAG--HIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-- 489
+ + L + + L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + V+
Sbjct: 221 VGFTVVDLKDLSSRLGVNVQDVTDI--VIWTTTPWTLPANQAVALHAEIDYQLVQVQSDR 278
Query: 490 --ANVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 546
N I+AK LVE+ ++ + VV DF G ++++ HP+ + R + ++ V
Sbjct: 279 GTQNFILAKDLVESAIERYKLENPVVLADFKGSAIENVLLQHPLITD-RQVPVILGEHVI 337
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 606
++ GTG VH AP HG DD+ + L + V N + G Y P A P G +I +
Sbjct: 338 ATSGTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGIYLPTA-PIFAGEHIYKANPKII 396
Query: 607 LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNF 662
L LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL +E ++ F
Sbjct: 397 EALGAAGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQTALNAIENDIEF 456
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN---IKHFCTLIDEH 719
VP+ K ++ I RP WCISRQR WGVPIP F DT ++ I+ LI++
Sbjct: 457 VPDWGKNRIQSMIEGRPDWCISRQRTWGVPIPFFVHKDTNALHPRTPELIEEVAKLIEQE 516
Query: 720 GPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEG 774
G D W++ + N + D LD+WFDSG + VL+++ PA +Y+EG
Sbjct: 517 GIDGWYNRDASDFIGADAEQYNAVR--DTLDVWFDSGTTHYAVLREREELQDPADLYLEG 574
Query: 775 MDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKK 834
DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GN+I+ DI +
Sbjct: 575 SDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSLGNIITPQDIIKD--- 631
Query: 835 LPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDV 894
G D LR+W+A+ A + GK I + + D
Sbjct: 632 --------------------------MGADGLRFWIAS-ADYRYEMTAGKEIFSRASDGY 664
Query: 895 QKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARAS 950
++IR++LR+LL L+ ST ++ +D Y+L+R E Q T+ Y E + +
Sbjct: 665 RRIRNTLRFLLANLNGFKPSTDALPVDQLIALDQYILQRAAEVQKTIQQAYEEMNFHIVT 724
Query: 951 RVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAE 1010
L NF +N+L FY ++KDR Y + +AR S L++I +R ++PI+ A+
Sbjct: 725 NALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSAQTALYHIVQAFVRWMSPILSFTAQ 784
Query: 1011 EVYSHLPSRQGTF 1023
E + +P + G +
Sbjct: 785 EAWPLIPEQTGKY 797
Score = 243 bits (620), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 226/408 (55%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y RE+ GK +++LHDGPPYANG H+GHAVNK+LKDI ++S ++ G YVPGWD
Sbjct: 46 IYQQIRESRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVMDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSLGAIAKAGHIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG----A 233
+ L + + L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + V+
Sbjct: 224 TVVDLKDLSSRLGVNVQDVTDI--VIWTTTPWTLPANQAVALHAEIDYQLVQVQSDRGTQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + VV DF G ++++ HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAIERYKLENPVVLADFKGSAIENVLLQHPLITD-RQVPVILGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P A P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGIYLPTA-PIFAGEHIYKANPKIIEAL 399
Query: 353 VEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW + +HSYP+ WR K P+I +A+ QWFI D + ++ AL
Sbjct: 400 GAAGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQTAL 447
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW +HSYP+ WR K P+I
Sbjct: 368 NPVGGNGIYLPTA-PIFAGEHIYKANPKIIEALGAAGRLWAHQPIKHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E + FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAKGLRQTALNAIENDIEFVPDWGKNRIQSMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT ++ I+ LI++ G D W++ + N +
Sbjct: 487 IPFFVHKDTNALHPRTPELIEEVAKLIEQEGIDGWYNRDASDFIGADAEQYNAVR 541
>gi|366991663|ref|XP_003675597.1| hypothetical protein NCAS_0C02410 [Naumovozyma castellii CBS 4309]
gi|342301462|emb|CCC69231.1| hypothetical protein NCAS_0C02410 [Naumovozyma castellii CBS 4309]
Length = 1001
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 234/662 (35%), Positives = 338/662 (51%), Gaps = 91/662 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN-QVPAHLLEG-------ATDLHALIWTTTPWSLP 469
TALAESELEY H S S Y+K L Q L+E + LIWT+TPW+L
Sbjct: 225 TALAESELEYNKSHESTSAYVKFPLTKQSSLQLIENLNIVQDTPVTISCLIWTSTPWTLF 284
Query: 470 ANQFIAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITY 526
+N+ I FN YS+ + N ++V L+ L + D+V F G+ L ++ Y
Sbjct: 285 SNRAICFNQNFSYSLVKLVDNNNEFILVESNLLIQLNIP---NYDIVKTFSGELLTNLKY 341
Query: 527 IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
+P+ E+ L LL V++ GTGLVH AP HG DD+L+ + +P+ + + ++G+Y+
Sbjct: 342 ENPLFSEEEPLPLLHGTHVTNDTGTGLVHTAPGHGPDDYLVGIRNNLPIYSPVDHEGRYN 401
Query: 587 --------------PDAGPGLEGLNILGDGKDQVL--HLVEPDVLW-TENYQHSYPYDWR 629
PDA PG G +L ++ L E ++L+ ++ Y HSYPYDWR
Sbjct: 402 LSELPSSTHKLLTDPDA-PGNTGRYVLDPKTTLIIIEKLKELNMLFRSKKYTHSYPYDWR 460
Query: 630 TKKPVILKASQQWFIDTERIKPEALACL-EEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
+KKPVI++A+ QWF++ ++K A+ L ++VNF PE K L I R WCISRQR
Sbjct: 461 SKKPVIIRATPQWFLNLAKMKQLAVESLNDKVNFFPERGKTRLLSFIKNRNEWCISRQRA 520
Query: 689 WGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFW---WSLSVEQLLNTS--DVNS 740
WGVPIP FY + D +++NE I H I+ +G D W +S E+ L S +V
Sbjct: 521 WGVPIPAFYRIENSDEVLMNEEIINHVIKTIESNGIDKWFDQYSSPTEEWLPESYKNVAH 580
Query: 741 NVTKSNDILDIWFDSGISWS---------------HVLKDKPAHVYMEGMDQINGWFMSS 785
+ D +D+WFDSG SW VL V +EG DQ GWF S
Sbjct: 581 EYRRGTDTMDVWFDSGSSWKVIESFYHDTLKIRNGSVLPSPLFDVALEGSDQHRGWFQSL 640
Query: 786 LLTSVALKHT--APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVG 843
LLT VA AP+RN+ HGF +DEKG KMSKS+GN IS D+ QG
Sbjct: 641 LLTKVAYSKVAEAPYRNIITHGFTLDEKGIKMSKSIGNTISPTDVIQG------------ 688
Query: 844 NVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRY 903
A+ L G+D LR++V AH++ + +G NI+ + ++KIR + R+
Sbjct: 689 ---------NPARGLIPLGIDGLRYYV-AHSNFTKDLVVGANIMKRVSESLKKIRITFRF 738
Query: 904 LLGVLHNHSESTGSIS-------RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNF 956
LL L E +G+ R VD Y++ L + Y + +++ L +
Sbjct: 739 LLSNL----EKSGTFEPLAVEELRPVDQYIISTLQKLLAESKESYQSYNFSKILTTLQHH 794
Query: 957 VVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1016
+ +ELSAFYF KD LY DSI E R L + + PI+P L +EV +++
Sbjct: 795 LSSELSAFYFDSSKDSLYSDSITSEKRKQIQTVLLYVLQTYSTILNPILPTLIQEVRNYI 854
Query: 1017 PS 1018
P+
Sbjct: 855 PT 856
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/409 (40%), Positives = 237/409 (57%), Gaps = 37/409 (9%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS- 79
FILHDGPPYANG H+GHA+NKILKDI +R GK V Y PGWDCHGLPIELK + S
Sbjct: 82 FILHDGPPYANGDLHLGHALNKILKDIIVRYQYSSGKYVFYKPGWDCHGLPIELKVLKSL 141
Query: 80 --KD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
KD + +SP IR A+ AL I+ Q+ +F + + DW ++ Y T DK++ +QL
Sbjct: 142 PKKDIETISPEKIRSMARKHALTAIDHQRKQFHQFAIFTDW-NDPYITMDKKFEIDQLKI 200
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN-QVPAHLLEG 195
F +Y + I R KPV+W ++TALAESELEY H S S Y+K L Q L+E
Sbjct: 201 FQKMYHEGLILRQNKPVFWGTETKTALAESELEYNKSHESTSAYVKFPLTKQSSLQLIEN 260
Query: 196 -------ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCLVESL 245
+ LIWT+TPW+L +N+ I FN YS+ + N ++V L+ L
Sbjct: 261 LNIVQDTPVTISCLIWTSTPWTLFSNRAICFNQNFSYSLVKLVDNNNEFILVESNLLIQL 320
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
+ ++V F G+ L ++ Y +P+ E+ L LL V++ GTGLVH AP HG
Sbjct: 321 NI---PNYDIVKTFSGELLTNLKYENPLFSEEEPLPLLHGTHVTNDTGTGLVHTAPGHGP 377
Query: 306 DDFLLALAEKIPVLNLITNQGKYS--------------PDAGPGLEGLNILGDGKDQVL- 350
DD+L+ + +P+ + + ++G+Y+ PDA PG G +L ++
Sbjct: 378 DDYLVGIRNNLPIYSPVDHEGRYNLSELPSSTHKLLTDPDA-PGNTGRYVLDPKTTLIII 436
Query: 351 -HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E ++L+ ++ Y HSYPYDWR+KKPVI++A+ QWF++ ++K A+
Sbjct: 437 EKLKELNMLFRSKKYTHSYPYDWRSKKPVIIRATPQWFLNLAKMKQLAV 485
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 96/163 (58%), Gaps = 11/163 (6%)
Query: 1117 PDAGPGLEGLNILGEGKDQVL--HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWF 1173
PDA PG G +L ++ L E ++L+ ++ Y HSYPYDWR+KKPVI++A+ QWF
Sbjct: 416 PDA-PGNTGRYVLDPKTTLIIIEKLKELNMLFRSKKYTHSYPYDWRSKKPVIIRATPQWF 474
Query: 1174 IDTERIKPEALACL-EGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY---DG 1229
++ ++K A+ L + VNF PE K L I R WCISRQR WGVPIP FY +
Sbjct: 475 LNLAKMKQLAVESLNDKVNFFPERGKTRLLSFIKNRNEWCISRQRAWGVPIPAFYRIENS 534
Query: 1230 DTIIVNEANIKHFCTLIDEHGPDFW---WSLPVEQLLNTSDVN 1269
D +++NE I H I+ +G D W +S P E+ L S N
Sbjct: 535 DEVLMNEEIINHVIKTIESNGIDKWFDQYSSPTEEWLPESYKN 577
>gi|19075438|ref|NP_587938.1| mitochondrial isoleucine-tRNA ligase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74625844|sp|Q9USL3.1|SYIM_SCHPO RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
Full=Isoleucyl-tRNA synthetase; Short=IleRS
gi|5701963|emb|CAB52155.1| mitochondrial isoleucine-tRNA ligase (predicted) [Schizosaccharomyces
pombe]
Length = 973
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 219/618 (35%), Positives = 338/618 (54%), Gaps = 44/618 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAESE+EY +H+S SIY +N E ++ AL+WTTTPW++P+N ++++
Sbjct: 219 SALAESEIEYDDNHVSTSIYFTFPVNSFSIDGCE-YNNVKALVWTTTPWTIPSNLALSYH 277
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P + Y + + +++ LV NL F + P + TY +P+ +Q
Sbjct: 278 PEINYGLYQHNNSIYLMSDNLVPNLD--FMQGAKRLASCPSDIISSFTYENPLLPKQ-SF 334
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-LEGL 596
L + +V++ GTG+VH AP HG +D+LL L + + + + G+Y+ +A G LEGL
Sbjct: 335 PFLQSNYVTNDIGTGIVHVAPGHGMEDYLLGLENNLRPFSPLDDYGRYTKEALDGSLEGL 394
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+LGDG +V+ +++ ++ Y+H YPYDWRT KP+IL+A+ QWFI E + A+
Sbjct: 395 EVLGDGGKKVISIMKNQNMIVKVSPYKHRYPYDWRTHKPLILRATPQWFISLENERKTAI 454
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTII--VNEANIKHF 712
L+ V +P +++ L + RP WCISRQR WG+PIPV Y+ T I + ++ +
Sbjct: 455 KALDSVKMIPPNSRARLLGFLNGRPEWCISRQRAWGLPIPVLYEKGTKIPLLTVKSVSYI 514
Query: 713 CTLIDEHGPDFWWSLSVE----QLLNTSDVNSNVTKSNDILDIWFDSGISWSHVL--KDK 766
++ G D W++ + Q ++ N + + LD+WFDSG SW+ + K+K
Sbjct: 515 IEKMEVEGVDSWFNDTENNGHAQWVHPDYRNKEYIRGTETLDVWFDSGTSWTTIAPRKNK 574
Query: 767 P-AHVYMEGMDQINGWFMSSLLTSVAL--KHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
P + +EG DQ GWF S LLT A K APF +F HGF+ DE+G K SKS+GNV
Sbjct: 575 PLIDLCLEGSDQHRGWFQSLLLTYTAYQSKPEAPFSTLFTHGFIFDERGQKQSKSLGNVT 634
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
D+ G + +G KKLP YGVD+LR WVA+ S + T +G
Sbjct: 635 DPEDVINGK------------------LLKG-KKLP-YGVDLLRLWVASCDSTNDT-NLG 673
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSEST----GSISRYVDVYMLKRLCEFQNTMDT 939
NIL + ++K R + R+ LG LH+ + S+ G + R +D L +L +FQ +
Sbjct: 674 PNILTQVGESLKKWRLTSRFCLGNLHDWNTSSSVDVGEL-RGIDKLALVQLDKFQTEIRE 732
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
LY + + L F+ + LS+ YF VKDRLY D N +R S L++ L+
Sbjct: 733 LYESYSINKVVHHLNYFMNSFLSSTYFDAVKDRLYADLPNSVSRRSVQTVLYHSLLTLIW 792
Query: 1000 TVAPIMPHLAEEVYSHLP 1017
++PI P LA+E++ LP
Sbjct: 793 AISPITPLLAQEIWQSLP 810
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 244/396 (61%), Gaps = 8/396 (2%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
S+LY WQ+E LN + F+L DGPP+ANG HIGHA+NKILKDI R LL+G+ VHYVPG
Sbjct: 64 SDLYEWQKENLNKEDSFVLLDGPPFANGRLHIGHALNKILKDIINRWQLLKGRSVHYVPG 123
Query: 65 WDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
WDCHGLPIE KAI + + S L+IRK AK+FA + Q F+ V+ DW Y T
Sbjct: 124 WDCHGLPIESKAIKANAERKSSLEIRKIAKDFANSAVQEQLMMFQRMAVMGDWPSR-YIT 182
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
++ +L F +L ++D I+R KPVYWS SSR+ALAESE+EY +HVS SIY
Sbjct: 183 MSDKFEIAELKVFLSLLQKDLIFRQNKPVYWSSSSRSALAESEIEYDDNHVSTSIYFTFP 242
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+N E ++ AL+WTTTPW++P+N ++++P + Y + + +++ LV +
Sbjct: 243 VNSFSIDGCE-YNNVKALVWTTTPWTIPSNLALSYHPEINYGLYQHNNSIYLMSDNLVPN 301
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
L F + + P + TY +P+ +Q L + +V++ GTG+VH AP HG
Sbjct: 302 LD--FMQGAKRLASCPSDIISSFTYENPLLPKQ-SFPFLQSNYVTNDIGTGIVHVAPGHG 358
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPG-LEGLNILGDGKDQVLHLVEPD--VLWTE 361
+D+LL L + + + + G+Y+ +A G LEGL +LGDG +V+ +++ ++
Sbjct: 359 MEDYLLGLENNLRPFSPLDDYGRYTKEALDGSLEGLEVLGDGGKKVISIMKNQNMIVKVS 418
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y+H YPYDWRT KP+IL+A+ QWFI E + A+
Sbjct: 419 PYKHRYPYDWRTHKPLILRATPQWFISLENERKTAI 454
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 5/149 (3%)
Query: 1113 GKYSPDAGPG-LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKAS 1169
G+Y+ +A G LEGL +LG+G +V+ +++ ++ Y+H YPYDWRT KP+IL+A+
Sbjct: 380 GRYTKEALDGSLEGLEVLGDGGKKVISIMKNQNMIVKVSPYKHRYPYDWRTHKPLILRAT 439
Query: 1170 QQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDG 1229
QWFI E + A+ L+ V +P +++ L + RP WCISRQR WG+PIPV Y+
Sbjct: 440 PQWFISLENERKTAIKALDSVKMIPPNSRARLLGFLNGRPEWCISRQRAWGLPIPVLYEK 499
Query: 1230 DTII--VNEANIKHFCTLIDEHGPDFWWS 1256
T I + ++ + ++ G D W++
Sbjct: 500 GTKIPLLTVKSVSYIIEKMEVEGVDSWFN 528
>gi|57866707|ref|YP_188341.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|418631944|ref|ZP_13194388.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU128]
gi|418634018|ref|ZP_13196416.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU129]
gi|420189634|ref|ZP_14695602.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM037]
gi|420192783|ref|ZP_14698640.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM023]
gi|420204115|ref|ZP_14709675.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM015]
gi|420234352|ref|ZP_14738916.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH051475]
gi|81819412|sp|Q5HPZ9.1|SYI_STAEQ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|57637365|gb|AAW54153.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|374833613|gb|EHR97288.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU128]
gi|374838010|gb|EHS01567.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU129]
gi|394260599|gb|EJE05408.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM023]
gi|394260969|gb|EJE05771.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM037]
gi|394274129|gb|EJE18554.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM015]
gi|394304314|gb|EJE47720.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH051475]
Length = 916
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 228/393 (58%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPYITLTPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALSEEVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ +PV++ + ++G ++ + GP EG+ K L E D L ++
Sbjct: 333 DDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|315304010|ref|ZP_07874447.1| isoleucine--tRNA ligase [Listeria ivanovii FSL F6-596]
gi|313627619|gb|EFR96315.1| isoleucine--tRNA ligase [Listeria ivanovii FSL F6-596]
Length = 921
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 227/620 (36%), Positives = 327/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ +LE T++ +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKKSASIFVAFKVTD-GKDVLEPGTNI--VIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ +L K F+ D V+ G L + HP R
Sbjct: 247 PDLDYVVLESAGEKYVVAEALLPSLREKLGFE-DAVVLKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ D PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYNLEVLAPLDDRGVFT-DEAPGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 VFYDTANKMVTEKLEEVGALLKLEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 EAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TISHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SELFREHGSNVWFERDVKDLLPDGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ +P+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAVTGESPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP G VI K+L G D++R WVA+ V +
Sbjct: 602 I-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T S+S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTDSVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + R + + L
Sbjct: 692 DSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEATDSPNRRAMQTVFYESVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHLPS 1018
+ +API+PH EEV++ L S
Sbjct: 752 KLLAPILPHTTEEVWNSLNS 771
Score = 263 bits (673), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 225/398 (56%), Gaps = 16/398 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E G+P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNAGRPSYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ + Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSVAEFRKLCAEYAMTQVEGQRTGFKRLGISGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKKSASIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ +LE T++ +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTD-GKDVLEPGTNI--VIWTTTPWTIPANMGITVNPDLDYVVLESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL K F+ D V+ G L + HP RD ++ ++ GTG VH A
Sbjct: 269 PSLREKLGFE-DAVVLKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ D PG EG+ K L E L
Sbjct: 326 PGHGEDDFLIGKKYNLEVLAPLDDRGVFT-DEAPGFEGVFYDTANKMVTEKLEEVGALLK 384
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 LEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLL 422
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ ++G ++ D PG EG+ K L E L E HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFT-DEAPGFEGVFYDTANKMVTEKLEEVGALLKLEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ VN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATSQWFASIDAFRDDLLEAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TISHISELFREHGSNVWFERDVKDLL 502
>gi|95928499|ref|ZP_01311246.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135289|gb|EAT16941.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 930
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 341/647 (52%), Gaps = 63/647 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIK-LNQVPAHL--LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+E+EY DH+S SI++K ++ +P L LEG + L+ +IWTTTPW++PAN I
Sbjct: 192 TALAEAEVEY-ADHVSPSIFVKFPYVDTLPVELNALEGKS-LYFVIWTTTPWTIPANLGI 249
Query: 475 AFNPALEYSVASVKGANVIV-AKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
NP L+Y V G +V+V A+ L + + + + V+ F ++ HP
Sbjct: 250 CLNPELDYVAVEVAGGDVLVLAEGLYQGVLKELELEGQVIASFKAPLFENKRCRHPFY-- 307
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+RD ++ V+ GTG VH AP HG DD+++ L + + N + + G+Y D L
Sbjct: 308 ERDSLVILGDHVTLEAGTGCVHTAPGHGHDDYVVGLKYGLDIYNPVDDYGRYRKDVE--L 365
Query: 594 EGLNILGDGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTER--I 649
G L + D V L E L +HSYP+ WR KKPVI +A+ QWFI E+ +
Sbjct: 366 FGGMKLAEANDAVCDKLTEVGALLKVSKVEHSYPHCWRCKKPVIFRATAQWFISMEKNDL 425
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
+ +AL + +V ++P ++ + I +RP WCISRQR WGVPI VFY + + +
Sbjct: 426 RQQALKHINDVQWIPGWGRERIYGMIEKRPDWCISRQRTWGVPITVFYCAECGEALADGK 485
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHV 762
+ H L ++ G D W+ V +LL V + + TK +DILD+WFDSG+S + V
Sbjct: 486 TMHHVADLFEDGGSDQWYEKEVSELLPEGTVCPSCGHDHFTKESDILDVWFDSGVSHAAV 545
Query: 763 LK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
++ D PA +Y+EG DQ GWF SSLL +V + AP++ V HGFVVD G KMSK
Sbjct: 546 VENRDYLDSPADLYLEGSDQHRGWFHSSLLAAVGTRGVAPYKAVLTHGFVVDGNGRKMSK 605
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S GNV++ + + +G +VLR WVAA +D
Sbjct: 606 SQGNVVAPDAV-----------------------------INKFGAEVLRLWVAAQDYQD 636
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
+ I + IL D ++IR++ RY+L +++ +T S++ +D + L RL
Sbjct: 637 -DIRISQEILQRLSDAYRRIRNTARYILSNIYDFDPATDSVADGDLLELDRWALSRLESL 695
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
++ Y ++++ + NF ELS+ Y ++KDR+Y + N AR S ++ I
Sbjct: 696 VGRVEKAYNDYEFHMLYHAVHNFCSVELSSIYLDILKDRVYTAAPNSVARRSAQTAMYRI 755
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGT---FSSFCHFKVYLQYSG 1037
L R +AP++ A+E+++ +P + + F F+ L SG
Sbjct: 756 LDALTRLIAPVLSFTADEIWAQMPGEREASVHLAGFPRFETSLLDSG 802
Score = 280 bits (715), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/389 (40%), Positives = 228/389 (58%), Gaps = 16/389 (4%)
Query: 12 REALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLP 71
R+A G+P F LHDGPPYANG HIGHA+NKILKDI L+S +QG V YVPGWDCHGLP
Sbjct: 41 RKATAGRPRFTLHDGPPYANGHTHIGHALNKILKDIVLKSRRMQGFDVPYVPGWDCHGLP 100
Query: 72 IEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
IEL K + K + ++ +IR++ +N+A E ++TQ +EF+ G+ +W+ + Y T
Sbjct: 101 IELMVDKKLGKKKRDMTKAEIRRECRNYATEWVDTQASEFKRLGIFGEWD-DPYLTMHDS 159
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK-LNQ 187
Y + ++ +Y+ KPV+W S TALAE+E+EY DHVS SI++K ++
Sbjct: 160 YEAATARELARFAERGGLYKGKKPVHWCSSCVTALAEAEVEY-ADHVSPSIFVKFPYVDT 218
Query: 188 VPAHL--LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV-AKCLVES 244
+P L LEG + L+ +IWTTTPW++PAN I NP L+Y V G +V+V A+ L +
Sbjct: 219 LPVELNALEGKS-LYFVIWTTTPWTIPANLGICLNPELDYVAVEVAGGDVLVLAEGLYQG 277
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
+ + + +V+ F ++ HP +RD ++ V+ GTG VH AP HG
Sbjct: 278 VLKELELEGQVIASFKAPLFENKRCRHPFY--ERDSLVILGDHVTLEAGTGCVHTAPGHG 335
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL-HLVEPDVLW-TEN 362
DD+++ L + + N + + G+Y D L G L + D V L E L
Sbjct: 336 HDDYVVGLKYGLDIYNPVDDYGRYRKDV--ELFGGMKLAEANDAVCDKLTEVGALLKVSK 393
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTER 391
+HSYP+ WR KKPVI +A+ QWFI E+
Sbjct: 394 VEHSYPHCWRCKKPVIFRATAQWFISMEK 422
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVL-HLVEPDVLW-TENYQHSYPYDWRTKKPV 1164
N + + G+Y D L G L E D V L E L +HSYP+ WR KKPV
Sbjct: 351 NPVDDYGRYRKDVE--LFGGMKLAEANDAVCDKLTEVGALLKVSKVEHSYPHCWRCKKPV 408
Query: 1165 ILKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
I +A+ QWFI E+ ++ +AL + V ++P ++ + I +RP WCISRQR WGVP
Sbjct: 409 IFRATAQWFISMEKNDLRQQALKHINDVQWIPGWGRERIYGMIEKRPDWCISRQRTWGVP 468
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I VFY + + + + H L ++ G D W+ V +LL
Sbjct: 469 ITVFYCAECGEALADGKTMHHVADLFEDGGSDQWYEKEVSELL 511
>gi|50293809|ref|XP_449316.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528629|emb|CAG62290.1| unnamed protein product [Candida glabrata]
Length = 982
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 231/649 (35%), Positives = 334/649 (51%), Gaps = 71/649 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN-QVPAHL-----LEGA---TDLHALIWTTTPWSL 468
TALAESELEY H+S + Y+K L AHL LE + LIWT+TPW+L
Sbjct: 216 TALAESELEYNEKHVSTAAYVKFPLTADSRAHLQDKLKLENELQNDQISCLIWTSTPWTL 275
Query: 469 PANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+N+ I FN YS+ + G+ VIV L+ L + +I + F G+ L+ + Y +
Sbjct: 276 FSNRAICFNENFSYSLLQLDGSYVIVENNLINQLGSDHKGEI--LKTFEGKLLKGLFYYN 333
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS-- 586
P+ + L+ V+ + GTGLVH AP HG DD+ L + + + + + ++G+Y
Sbjct: 334 PLVSDIVARPLIHGDHVTDNAGTGLVHTAPGHGHDDYFLGIENDLEIYSPVDHEGRYILN 393
Query: 587 --PD--------AGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPV 634
PD G GL + + +L L+ +L Y HSYPYDWR K PV
Sbjct: 394 ELPDNCKELLMEGGTGLGRKVLDSETTTVILDLLSKKQALLKAHKYTHSYPYDWRAKTPV 453
Query: 635 ILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIP 694
I++A+ QWF D +K A+ LE+V F P+ + L I R WCISRQR WGVPIP
Sbjct: 454 IIRATPQWFADLHDVKDLAIKSLEKVEFYPKRGENRLSSFIKSRNEWCISRQRSWGVPIP 513
Query: 695 VFYDG---DTIIVNEANIKHFCTLIDEHGPDFWWS----LSVEQLLNTSDVNSNVTKSND 747
VF++ D +++N+ +++ T I +HG D W+S +S N + + K D
Sbjct: 514 VFHNKSNPDKVLINDELLEYIITRISKHGSDLWFSPEDDISDWFPENYRTMAKDFIKGTD 573
Query: 748 ILDIWFDSGISWSHV---------LKDKP---AHVYMEGMDQINGWFMSSLLTSVA--LK 793
+D+WFDSG +W+ + L P A+VY+EG DQ GWF SSLLT VA +
Sbjct: 574 TMDVWFDSGSTWNIIREFYQKELGLSTVPQPLANVYLEGSDQHRGWFQSSLLTKVACSMS 633
Query: 794 HTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQ 853
AP+ V HGF +DEKG KMSKS+GN IS I +G KK
Sbjct: 634 EIAPYNEVITHGFTLDEKGIKMSKSIGNTISPESIIEGDKK------------------- 674
Query: 854 GAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLH---N 910
+ LPA G+D LR++V A A V +G +L + ++K R ++R+L+ L
Sbjct: 675 --RNLPALGIDGLRYFV-AQADFTTDVTVGPTVLKHVAEALKKCRLTMRFLISNLEISKR 731
Query: 911 HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVK 970
+S S R VD Y+L + + LY +++A L + NELS+FYF + K
Sbjct: 732 YSLLNTSELRPVDKYVLASVNKLLEETKELYKVHNFSKALVALQFHMNNELSSFYFDISK 791
Query: 971 DRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
D LY DSI R TL +I+ +API+P L +E ++ LP +
Sbjct: 792 DSLYSDSIESLKRRQIQTTLFHIYDAYRAMLAPILPILVQESWNFLPKQ 840
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 228/403 (56%), Gaps = 30/403 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT-- 78
F+LHDGPPYANG H+GHA+NKILKD R L QGK V+Y PGWDCHGLPIE+KA+
Sbjct: 75 FVLHDGPPYANGDLHLGHALNKILKDFVNRFQLSQGKTVYYRPGWDCHGLPIEMKALKDL 134
Query: 79 -SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
DK+ S + +R+ A+ AL +++ Q+ +F+ +G+L DW + Y T DK + NQL F
Sbjct: 135 RDADKMDS-VKVRELARQHALRSLDKQRDQFKKYGILTDWS-DPYVTMDKSFEVNQLKVF 192
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN-QVPAHL---- 192
++ I R KPVYW ++TALAESELEY HVS + Y+K L AHL
Sbjct: 193 QKMFNMGLIKRQNKPVYWGTVTKTALAESELEYNEKHVSTAAYVKFPLTADSRAHLQDKL 252
Query: 193 -LEGA---TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWT 248
LE + LIWT+TPW+L +N+ I FN YS+ + G+ VIV L+ L
Sbjct: 253 KLENELQNDQISCLIWTSTPWTLFSNRAICFNENFSYSLLQLDGSYVIVENNLINQLGSD 312
Query: 249 FQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF 308
+ E++ F G+ L+ + Y +P+ + L+ V+ + GTGLVH AP HG DD+
Sbjct: 313 HKG--EILKTFEGKLLKGLFYYNPLVSDIVARPLIHGDHVTDNAGTGLVHTAPGHGHDDY 370
Query: 309 LLALAEKIPVLNLITNQGKYS----PD--------AGPGLEGLNILGDGKDQVLHLVEPD 356
L + + + + + ++G+Y PD G GL + + +L L+
Sbjct: 371 FLGIENDLEIYSPVDHEGRYILNELPDNCKELLMEGGTGLGRKVLDSETTTVILDLLSKK 430
Query: 357 --VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L Y HSYPYDWR K PVI++A+ QWF D +K A+
Sbjct: 431 QALLKAHKYTHSYPYDWRAKTPVIIRATPQWFADLHDVKDLAI 473
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 5/144 (3%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFID 1175
+ G GL + E +L L+ +L Y HSYPYDWR K PVI++A+ QWF D
Sbjct: 405 EGGTGLGRKVLDSETTTVILDLLSKKQALLKAHKYTHSYPYDWRAKTPVIIRATPQWFAD 464
Query: 1176 TERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDG---DTI 1232
+K A+ LE V F P+ + L I R WCISRQR WGVPIPVF++ D +
Sbjct: 465 LHDVKDLAIKSLEKVEFYPKRGENRLSSFIKSRNEWCISRQRSWGVPIPVFHNKSNPDKV 524
Query: 1233 IVNEANIKHFCTLIDEHGPDFWWS 1256
++N+ +++ T I +HG D W+S
Sbjct: 525 LINDELLEYIITRISKHGSDLWFS 548
>gi|299535884|ref|ZP_07049204.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
gi|424738824|ref|ZP_18167253.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZB2]
gi|298728636|gb|EFI69191.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
gi|422947308|gb|EKU41705.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZB2]
Length = 922
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 223/620 (35%), Positives = 326/620 (52%), Gaps = 63/620 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----VPAHLLEGATDLHALIWTTTPWSLPANQF 473
+ALAE+E+EYK D S SIY+ + VPA D +IWTTTPW+LPAN
Sbjct: 192 SALAEAEIEYK-DIKSPSIYVSFAIKDAKGVVPA-------DAKFIIWTTTPWTLPANLG 243
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
I+ NP Y V +V I+AK L+E++ T D +VV + G+ L I HP
Sbjct: 244 ISLNPEFIYVVVAVANKKFIIAKELLESVATTLGWVDYEVVQEVKGEALDRIVAQHPFY- 302
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V++ GTG VH AP HG+DD+ + + +L+ + N G Y+ D PG
Sbjct: 303 -DRESLIMVGEHVTAEAGTGCVHTAPGHGEDDYHIGKQYGLGILSPLDNSGCYT-DEAPG 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ K L E L + + HSYP+DWRTKKPVI +A+ QWF E +
Sbjct: 361 FEGVFYNDANKLVTEKLKEVGALEKLDFFTHSYPHDWRTKKPVIYRATPQWFASVEAFRG 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E L ++ F P + L + I R W ISRQR WGVPIP+FY +G+ II E I
Sbjct: 421 ELLEAVKATAFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIPIFYAENGEPIITPE-TI 479
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L E+G + W+ + ++LL + N TK NDI+D+WFDSG S VL
Sbjct: 480 SHVSALFRENGSNIWFQKTAKELLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSHQGVLV 539
Query: 765 DK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + HGFV+D +G KMSKS+G
Sbjct: 540 ERGMKYPADLYLEGSDQHRGWFNSSLITSVAINGYAPYKGLLTHGFVLDGEGRKMSKSLG 599
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI +P K + YG D+LR WVA+ V
Sbjct: 600 NVI-----------IPQ------------------KVMDQYGADILRLWVAS-VDYTADV 629
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
I ++L + +KIR++ R+L G + + +S R +D Y+ RL + T
Sbjct: 630 RISMDMLKQVSEVYRKIRNTFRFLHGNIADFDPKKDRVSYAELREMDQYVYMRLQDVLKT 689
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y + +A V+ NFV ELS+FY + KD +Y + + + R + +++
Sbjct: 690 VRAAYDRYDFAAVYHVVNNFVAVELSSFYLDIAKDVVYIEGHDNKDRRAMQTVIYDTLMT 749
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH +E++S+L
Sbjct: 750 LVKIMTPIIPHTTDEMWSYL 769
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/396 (42%), Positives = 229/396 (57%), Gaps = 22/396 (5%)
Query: 11 QREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
Q E G+PEF+LHDGPPYANG HIGHA+NK+LKD+ R + G V+Y+PGWD HGL
Sbjct: 41 QMERTEGRPEFVLHDGPPYANGDIHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGL 100
Query: 71 PIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
PIE +A+T+K K +S R+ + +A E I+ Q+ +F G+ DWE N Y T
Sbjct: 101 PIE-QALTNKGVKRKEMSVAAFRQLCEEYAYEQIDNQRTQFRRLGIRGDWE-NPYITLKP 158
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F + ++ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+ +
Sbjct: 159 EFEARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEIEYK-DIKSPSIYVSFAIKD 217
Query: 188 ----VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
VPA D +IWTTTPW+LPAN I+ NP Y V +V I+AK L+E
Sbjct: 218 AKGVVPA-------DAKFIIWTTTPWTLPANLGISLNPEFIYVVVAVANKKFIIAKELLE 270
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ T D EVV + G+ L I HP R+ ++ V++ GTG VH AP
Sbjct: 271 SVATTLGWVDYEVVQEVKGEALDRIVAQHPFY--DRESLIMVGEHVTAEAGTGCVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-E 361
HG+DD+ + + +L+ + N G Y+ D PG EG+ K L E L +
Sbjct: 329 HGEDDYHIGKQYGLGILSPLDNSGCYT-DEAPGFEGVFYNDANKLVTEKLKEVGALEKLD 387
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF E + E L
Sbjct: 388 FFTHSYPHDWRTKKPVIYRATPQWFASVEAFRGELL 423
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPV 1164
L+ + N G Y+ D PG EG+ K L E L + + HSYP+DWRTKKPV
Sbjct: 345 LSPLDNSGCYT-DEAPGFEGVFYNDANKLVTEKLKEVGALEKLDFFTHSYPHDWRTKKPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF E + E L ++ F P + L + I R W ISRQR WGVPIP
Sbjct: 404 IYRATPQWFASVEAFRGELLEAVKATAFTPAWGETRLYNMIRDRGDWVISRQRAWGVPIP 463
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY +G+ II E I H L E+G + W+ ++LL
Sbjct: 464 IFYAENGEPIITPE-TISHVSALFRENGSNIWFQKTAKELL 503
>gi|70726723|ref|YP_253637.1| isoleucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
gi|84029567|sp|Q4L5P4.1|SYI_STAHJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|68447447|dbj|BAE05031.1| Ile-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
Length = 916
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + + D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDTKGVVDQ---DAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G I+A+ L E++ + D D + +F G+ L+ + HP
Sbjct: 247 PDLKYGQYNVNGKKYIIAQALSEDVAEALEWDKDAIQLEKEFTGKELEYVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + G E
Sbjct: 305 RISLVINGNHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLDDKGVFTEEGGQ-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L N+ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +EE +F + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEETDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +EHG + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 483 VADLFEEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKEMDIMDVWFDSGSSHRGVLENR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T I VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDVIPEAELLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + N R S L+ I +
Sbjct: 693 IEHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNAHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV++H P
Sbjct: 753 TKLLAPILVHTAEEVWTHTP 772
Score = 271 bits (694), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 229/398 (57%), Gaps = 18/398 (4%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G +ILHDGPPYANG H+GHA+NKI+KDI +R +QG YVPGWD
Sbjct: 37 YQKALEKNKGNQSYILHDGPPYANGNLHMGHALNKIIKDIIVRYKTMQGFYAPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FALE I QK +F+ GV D+ ++ Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSIAEFREKCKEFALEQIELQKKDFKRLGVRGDF-NDPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFD 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL--- 241
+ + + D +IWTTTPW++P+N I +P L+Y +V G I+A+ L
Sbjct: 214 VKDTKGVVDQ---DAQFIIWTTTPWTIPSNVAITVHPDLKYGQYNVNGKKYIIAQALSED 270
Query: 242 -VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
E+L+W + I++ +F G+ L+ + HP R ++ V++ GTG VH A
Sbjct: 271 VAEALEWD-KDAIQLEKEFTGKELEYVEAQHPF--LDRISLVINGNHVTTDAGTGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ +PV++ + ++G ++ + G EG+ K L E D L
Sbjct: 328 PGHGEDDYIVGQKYDLPVISPLDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N+ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 387 LNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + G EG+ K L E D L N+ HSYP+DWRTKKPVI +
Sbjct: 349 LDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E +F + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEETDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEEHGSNIWFEREAKDLL 504
>gi|116747573|ref|YP_844260.1| isoleucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116696637|gb|ABK15825.1| Isoleucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 928
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 227/653 (34%), Positives = 338/653 (51%), Gaps = 64/653 (9%)
Query: 395 EALVCKTVGNILGRVGITHDRP--------GTALAESELEYKPDHISKSIYLKIKLNQV- 445
EA + + +G G+ + TALAE+E+EY DH S SIY+K ++
Sbjct: 161 EASIARELGRFFQEGGVIRSKKPIYWCTSCKTALAEAEVEYH-DHTSPSIYVKFPMSAGG 219
Query: 446 PAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKW 504
A E D+ LIWTTTPW+LPAN IA +P Y A V I+A+ L+E+
Sbjct: 220 RAKFPELAGKDVAVLIWTTTPWTLPANLAIAVHPDFTYVAADVGREVWILARGLLESCME 279
Query: 505 TFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 563
+F D V+ F L+ + HP R+ ++ V+ GTG VH AP HG++
Sbjct: 280 SFGIKDYRVLRTFEAGELRGLACSHPFV--DRESVIVTGTHVTLEAGTGCVHTAPGHGRE 337
Query: 564 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE-NYQH 622
D+ +AL + V + + + G ++ D P G + + L E L E + H
Sbjct: 338 DYDMALEYGLDVYSPVDDNGCFTDDV-PLFAGRFVFDANRAINAKLEETGKLILEKSITH 396
Query: 623 SYPYDWRTKKPVILKASQQWFIDTER--IKPEALACLEEVNFVPESAKKTLRDQIAQRPY 680
SYP+ WR K PVI +A++QWFI E+ ++ AL ++ V+++P + + + IA RP
Sbjct: 397 SYPHCWRCKNPVIFRATEQWFISMEKNDLRGRALQWIDRVDWIPGWGRDRIHNMIANRPD 456
Query: 681 WCISRQRVWGVPIPVF--YDGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV 738
WCISRQR WGVPI VF T++ ++ + L + +G D W+ ++ E+LL
Sbjct: 457 WCISRQRSWGVPICVFTCRKCGTVLASKELFEKTAALFERNGADCWFEMTSEELLPPGAT 516
Query: 739 -----NSNVTKSNDILDIWFDSGISWSHVLKDKP-----AHVYMEGMDQINGWFMSSLLT 788
+ K DILD+WFDSG+S + VL+ +P A +Y+EG DQ GWF SSLLT
Sbjct: 517 CAGCGGQDFEKEEDILDVWFDSGVSHAAVLEARPDLRSPADLYLEGSDQHRGWFHSSLLT 576
Query: 789 SVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISA 848
+V ++ AP+++V HGFVVD +G KMSKS+GNVI+ +I +
Sbjct: 577 AVGTRNAAPYKSVLTHGFVVDGQGYKMSKSLGNVIAPEEIIR------------------ 618
Query: 849 HDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVL 908
YG +VLR WV+A +D V I +IL + ++IR++ R+LLG L
Sbjct: 619 -----------QYGAEVLRLWVSAEDYRD-DVRISPDILKRLSEAYRRIRNTCRFLLGNL 666
Query: 909 HNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAF 964
++ S+ +D + L +L EF + Y F++ R N+ V +LSAF
Sbjct: 667 NDFDPEKDSVPYDRMDELDRFALHQLQEFVRRVRQAYERFEFHRVYHAFHNYCVVDLSAF 726
Query: 965 YFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
Y ++KDRLY G AR S ++ I LLR +API+ AEE + HLP
Sbjct: 727 YLDILKDRLYTSGAAGPARRSAQTAVYRILSALLRLMAPILSFTAEEAWWHLP 779
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 220/392 (56%), Gaps = 12/392 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY RE G+P +ILHDGPPYANG H+G A+NKILKD+ ++S + GK YVPGWD
Sbjct: 36 LYDMLRERSRGRPPYILHDGPPYANGHIHLGTALNKILKDMIVKSQQMSGKNAVYVPGWD 95
Query: 67 CHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIE K + + + +S ++IR+ + +A + I+ Q+ EF GVL +W +N Y
Sbjct: 96 CHGLPIEHQVDKELGKRKQTMSQVEIRRHCRKYAEKFIDIQRNEFRRLGVLGEW-NNPYL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T +Y + + +++ + R KP+YW S +TALAE+E+EY DH S SIY+K
Sbjct: 155 TMSYDYEASIARELGRFFQEGGVIRSKKPIYWCTSCKTALAEAEVEYH-DHTSPSIYVKF 213
Query: 184 KLNQ-VPAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
++ A E D+ LIWTTTPW+LPAN IA +P Y A V I+A+ L
Sbjct: 214 PMSAGGRAKFPELAGKDVAVLIWTTTPWTLPANLAIAVHPDFTYVAADVGREVWILARGL 273
Query: 242 VESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+ES +F D V+ F L+ + HP R+ ++ V+ GTG VH A
Sbjct: 274 LESCMESFGIKDYRVLRTFEAGELRGLACSHPFV--DRESVIVTGTHVTLEAGTGCVHTA 331
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG++D+ +AL + V + + + G ++ D P G + + L E L
Sbjct: 332 PGHGREDYDMALEYGLDVYSPVDDNGCFTDDV-PLFAGRFVFDANRAINAKLEETGKLIL 390
Query: 361 E-NYQHSYPYDWRTKKPVILKASQQWFIDTER 391
E + HSYP+ WR K PVI +A++QWFI E+
Sbjct: 391 EKSITHSYPHCWRCKNPVIFRATEQWFISMEK 422
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 4/116 (3%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
HSYP+ WR K PVI +A++QWFI E+ ++ AL ++ V+++P + + + IA RP
Sbjct: 396 HSYPHCWRCKNPVIFRATEQWFISMEKNDLRGRALQWIDRVDWIPGWGRDRIHNMIANRP 455
Query: 1210 YWCISRQRVWGVPIPVF--YDGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WCISRQR WGVPI VF T++ ++ + L + +G D W+ + E+LL
Sbjct: 456 DWCISRQRSWGVPICVFTCRKCGTVLASKELFEKTAALFERNGADCWFEMTSEELL 511
>gi|291279575|ref|YP_003496410.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290754277|dbj|BAI80654.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 933
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 225/643 (34%), Positives = 344/643 (53%), Gaps = 67/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAF 476
TALAE+E+EY DH S SIY+K L L T+ A+IWTTTPW++PAN IA
Sbjct: 192 TALAEAEVEYH-DHTSPSIYVKFPLQDDAKKALGIETEKAFAVIWTTTPWTIPANLGIAL 250
Query: 477 NPALEYSVASVKGAN---------VIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITY 526
NP EY++ VK +N +++AK LVE L F+ + D++ F + +++
Sbjct: 251 NPEFEYALLKVKKSNNKNIDNDDILVLAKELVERLVEIFEIEEYDIIKTFNPEIIENKNA 310
Query: 527 IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
HP R+ + V+ +GTGLVH AP HGQ+D+ + L + +LN + + G +
Sbjct: 311 KHPFY--DRNSLFVLGNHVTLEQGTGLVHTAPGHGQEDYEVGLKYGLEILNPVDDYGNFK 368
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
D G NI +D +++L++ + ++ + +HSYP+ WR K PV+ +A+ QWFI
Sbjct: 369 KDT-ELFAGQNIFKANQD-IINLMDENKTLIRQDKVEHSYPHCWRCKNPVVFRATPQWFI 426
Query: 645 DTER--IKPEALACLEE-VNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
E+ ++ +AL +++ V ++P+ + + I RP WCISRQR WGVPI VF G+
Sbjct: 427 SMEKNDLRKKALEEIDKNVTWIPKWGRNRIYSMIEHRPDWCISRQRSWGVPIAVFLCGEC 486
Query: 702 --IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV----NSNVTKSNDILDIWFDS 755
II+NE + + + G D W+ VE + + + N+ K DILD+WFDS
Sbjct: 487 GEIILNEEIQEKVLSEFYKQGADIWFEKDVEYFIGDASCPKCGSKNIRKETDILDVWFDS 546
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G+S + V + + PA +Y+EG DQ GWF SSLL SV + AP++ V HGFVVD
Sbjct: 547 GVSHAAVCEVRKELGWPADMYLEGSDQHRGWFHSSLLESVGTRGRAPYKEVLTHGFVVDG 606
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GNVI+ +I + YG ++LR WV
Sbjct: 607 KGLKMSKSLGNVITPDEI-----------------------------IDKYGAEILRLWV 637
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYM 926
AA + V I +I+ + +KIR+++RYLLG L++ + SI + +D Y+
Sbjct: 638 AAEDYTE-DVRISNDIIKRLVESYRKIRNTMRYLLGNLYDFNPDENSIPFEKLKELDKYI 696
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L R E + + Y +Q+ L+NF +N+LSAFY ++KDR+Y + R S
Sbjct: 697 LMRWQEVKKRIYKAYENYQFHIFYHTLINFCINDLSAFYLDIIKDRVYAYKNDSFERRSA 756
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSS-FCH 1028
T+ + + + PI+ A+EV+ LP+ G S F H
Sbjct: 757 QSTMFTLAKEMAIVMNPILSFTADEVWEFLPNFDGKQESVFIH 799
Score = 263 bits (671), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 153/388 (39%), Positives = 222/388 (57%), Gaps = 22/388 (5%)
Query: 20 EFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIEL---KA 76
++ILHDGPPYANG H+GHA+NKILKD +++ G + YVPGWDCHGLPIE K
Sbjct: 49 KYILHDGPPYANGHLHMGHALNKILKDFIIKTKSGFGFKTPYVPGWDCHGLPIEHQVDKE 108
Query: 77 ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ K + + RK + +A + IN Q+ EF+ GV DWE N Y T D Y N L +
Sbjct: 109 LGKKKDSIPKHEKRKHCRAYAEKFINIQREEFKRLGVFGDWE-NPYITMDFAYEANTLKE 167
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
Y + Y+ LKPVYW S TALAE+E+EY DH S SIY+K L L
Sbjct: 168 LYKFFNNGGAYKGLKPVYWCISCVTALAEAEVEYH-DHTSPSIYVKFPLQDDAKKALGIE 226
Query: 197 TD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---------VIVAKCLVESLK 246
T+ A+IWTTTPW++PAN IA NP EY++ VK +N +++AK LVE L
Sbjct: 227 TEKAFAVIWTTTPWTIPANLGIALNPEFEYALLKVKKSNNKNIDNDDILVLAKELVERLV 286
Query: 247 WTFQT-DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
F+ + +++ F + +++ HP R+ + V+ +GTGLVH AP HGQ
Sbjct: 287 EIFEIEEYDIIKTFNPEIIENKNAKHPFY--DRNSLFVLGNHVTLEQGTGLVHTAPGHGQ 344
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
+D+ + L + +LN + + G + D G NI +D +++L++ + ++ +
Sbjct: 345 EDYEVGLKYGLEILNPVDDYGNFKKDT-ELFAGQNIFKANQD-IINLMDENKTLIRQDKV 402
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTER 391
+HSYP+ WR K PV+ +A+ QWFI E+
Sbjct: 403 EHSYPHCWRCKNPVVFRATPQWFISMEK 430
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 9/168 (5%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
LN + + G + D G NI +D +++L++ + ++ + +HSYP+ WR K P
Sbjct: 358 LNPVDDYGNFKKDT-ELFAGQNIFKANQD-IINLMDENKTLIRQDKVEHSYPHCWRCKNP 415
Query: 1164 VILKASQQWFIDTER--IKPEALACLE-GVNFVPESAKKSLRDQIAQRPYWCISRQRVWG 1220
V+ +A+ QWFI E+ ++ +AL ++ V ++P+ + + I RP WCISRQR WG
Sbjct: 416 VVFRATPQWFISMEKNDLRKKALEEIDKNVTWIPKWGRNRIYSMIEHRPDWCISRQRSWG 475
Query: 1221 VPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
VPI VF G+ II+NE + + + G D W+ VE + +
Sbjct: 476 VPIAVFLCGECGEIILNEEIQEKVLSEFYKQGADIWFEKDVEYFIGDA 523
>gi|418613977|ref|ZP_13176967.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU118]
gi|374821846|gb|EHR85887.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU118]
Length = 916
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 228/393 (58%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPYITLTPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALSEEVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ +PV++ + ++G ++ + GP EG+ K L E D L ++
Sbjct: 333 DDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|415886497|ref|ZP_11548277.1| isoleucyl-tRNA synthetase [Bacillus methanolicus MGA3]
gi|387587184|gb|EIJ79507.1| isoleucyl-tRNA synthetase [Bacillus methanolicus MGA3]
Length = 924
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 325/618 (52%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ K+ L TD +IWTTTPW++PAN I +
Sbjct: 191 SALAEAEIEYK-DKRSPSIYVGFKVKDGKGIL---DTDTQIVIWTTTPWTIPANLGITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L Y V KG ++A+ L+E++K + ++ G+ L+ I HP+ RD
Sbjct: 247 PELTYIVVEEKGKKYLIAEELLESVKNELSWENPAIMKKIKGRELEYIIASHPLY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF + + VL + +G Y PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFNVGQKYGLDVLAPVDEKG-YMTHEAPGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 364 FYDDANKSITQKLEEVGALLKLSFITHSYPHDWRTKKPVIFRATSQWFASIKDFRNELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + I R WCISRQRVWGVPIPVFY +G+ II +E I H
Sbjct: 424 AVKETKWVPAWGETRLYNMIRDRGDWCISRQRVWGVPIPVFYAENGEPIITDET-INHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L ++G + W+ + LL + N TK DI+D+WFDSG S VL+++
Sbjct: 483 ELFRKYGSNVWFEREAKDLLPEGFTHPGSPNGRFTKETDIMDVWFDSGSSHQAVLEERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTAVAITGKAPYKGVLSHGFALDGEGRKMSKSLGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + +G D+LR WVA+ V +
Sbjct: 603 -----------VPA------------------KVMDQFGADILRLWVAS-VDYQSDVRVS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG L + + ++ R VD +ML +L + +
Sbjct: 633 DAILKQVAEVYRKIRNTFRFLLGNLADFNPEKDAVPYENLREVDQFMLVKLNKLIKYVHD 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++++ + NF +LSAFY KD LY ++ + + R S L+ L +
Sbjct: 693 SYENYEFSGIYHAVNNFCTLDLSAFYLDFAKDILYIEAADNKERRSIQTVLYESLLALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLP 1017
VAPI+ H A+EV+SH+P
Sbjct: 753 LVAPILSHTADEVWSHIP 770
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 228/396 (57%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P FILHDGPPYANG H+GHA+NKILKDI +R + G YVPGWD
Sbjct: 36 IYQKVQERTKGRPMFILHDGPPYANGDIHMGHALNKILKDIIVRYKSMSGYHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK + +A E I+ Q+ +F+ GV DWE N Y
Sbjct: 96 THGLPIE-QALTNKGVNRKEMTVSEFRKLCEKYAYEQIDNQRTQFKRLGVRGDWE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYK-DKRSPSIYVGF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
K+ L TD +IWTTTPW++PAN I +P L Y V KG ++A+ L+E
Sbjct: 213 KVKDGKGIL---DTDTQIVIWTTTPWTIPANLGITVHPELTYIVVEEKGKKYLIAEELLE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+K + ++ G+ L+ I HP+ RD ++ V++ GTG VH AP
Sbjct: 270 SVKNELSWENPAIMKKIKGRELEYIIASHPLY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF + + VL + +G Y PG EGL K L E L +
Sbjct: 328 HGEDDFNVGQKYGLDVLAPVDEKG-YMTHEAPGFEGLFYDDANKSITQKLEEVGALLKLS 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 387 FITHSYPHDWRTKKPVIFRATSQWFASIKDFRNELL 422
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 1111 NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKAS 1169
++ Y PG EGL K L E L ++ HSYP+DWRTKKPVI +A+
Sbjct: 348 DEKGYMTHEAPGFEGLFYDDANKSITQKLEEVGALLKLSFITHSYPHDWRTKKPVIFRAT 407
Query: 1170 QQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-- 1227
QWF + + E L ++ +VP + L + I R WCISRQRVWGVPIPVFY
Sbjct: 408 SQWFASIKDFRNELLEAVKETKWVPAWGETRLYNMIRDRGDWCISRQRVWGVPIPVFYAE 467
Query: 1228 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L ++G + W+ + LL
Sbjct: 468 NGEPIITDE-TINHVSELFRKYGSNVWFEREAKDLL 502
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1024 SSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV 1083
++FC + Y AK ILY ++ + + R S L+ L + VAPI+ H A+EV
Sbjct: 707 NNFCTLDLSAFYL-DFAKDILYIEAADNKERRSIQTVLYESLLALTKLVAPILSHTADEV 765
Query: 1084 YSHLP 1088
+SH+P
Sbjct: 766 WSHIP 770
>gi|297569151|ref|YP_003690495.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296925066|gb|ADH85876.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 946
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 217/640 (33%), Positives = 327/640 (51%), Gaps = 71/640 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA---------TDLHALIWTTTPWSL 468
TALAE+E+EY D S SIY+K L A L +L +IWTTTPW+L
Sbjct: 192 TALAEAEVEYA-DQTSPSIYVKFPLQPAAAKALAEKHPNLSPDLFPNLFLVIWTTTPWTL 250
Query: 469 PANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYI 527
PAN +A +P Y+ V G +I+A+ LVE + + VV L + +
Sbjct: 251 PANVAVALHPDFTYAAVEVNGETLIMAEELVEQVAAACGLGEYRVVTTLAAADLLGHSCL 310
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
HP RD +++ A +V+ GTG VH AP HG++D+L L +PVL+ + ++G ++
Sbjct: 311 HPFMG--RDSRIIAADYVTLEAGTGCVHTAPGHGREDYLSGLKHDLPVLSPVDDRGHFTA 368
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDT 646
+ GP G+ IL K + L + L E HSYP+ WR KKPVI +A++QWFI
Sbjct: 369 EGGP-YAGMFILKGNKQIIADLQQSGALLGEQKISHSYPHCWRCKKPVIFRATEQWFIGM 427
Query: 647 E----------RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVF 696
+ ++ +AL + +++P ++ + +A RP WC+SRQR WGVPI
Sbjct: 428 DIPAGIAGEQTTLREKALKAINNADWIPRWGRERIHGMVAGRPDWCLSRQRAWGVPITAV 487
Query: 697 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLN----TSDVNSNVTKSNDILD 750
+ D ++ +E + G D W++ + + + ++N+TK DILD
Sbjct: 488 WCQDCGRVLNDEKIAARITDFFTQEGADAWFARPLTDFIGPEARCTCGSTNLTKEEDILD 547
Query: 751 IWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHG 805
+WFDSG+S++ VL+ + PA +Y+EG DQ GWF S+LL +V + TAP++ V HG
Sbjct: 548 VWFDSGVSYAAVLEQRRELQSPADLYLEGSDQHRGWFQSALLAAVGTRGTAPYKAVLTHG 607
Query: 806 FVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDV 865
FVVD KG KMSKS+GNVI+ G +I H G ++
Sbjct: 608 FVVDGKGKKMSKSIGNVIAP-----------------GQIIEKH------------GAEI 638
Query: 866 LRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS-----R 920
LR W A+ +D + I NIL D +KIR+++R+LLG LH+ +
Sbjct: 639 LRLWAASEDYRD-DIRISDNILKQLADAYRKIRNTVRFLLGNLHDFDPTAPGAPPEAEMD 697
Query: 921 YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSING 980
+D ++L R + + T Y F++ + L NF LSA Y +VKDRLY +
Sbjct: 698 ELDRWILARFEQLKEKTRTGYDSFEFHQVYHGLYNFCTVSLSALYLDIVKDRLYTMPADH 757
Query: 981 EARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQ 1020
R + ++ I LLR +API+ LA E + +LP Q
Sbjct: 758 PQRRAAQAVMYEICDGLLRLLAPILSFLAAEAWEYLPVDQ 797
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 217/398 (54%), Gaps = 19/398 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY A +P ++LHDGPPYANG H+GHA+NKILKDI L+S + G YVPGWD
Sbjct: 36 LYENLCRATAHRPLYVLHDGPPYANGHLHMGHALNKILKDIILKSKRMSGYHCPYVPGWD 95
Query: 67 CHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIEL K + + + L+ R+K + +A + I Q EF+ GVL W+ Y
Sbjct: 96 CHGLPIELNVDKELGEQKAAIGKLEFREKCRRYADQWIAVQSEEFQRLGVLGHWQQP-YL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T D Y +F N + R KPV+W S RTALAE+E+EY D S SIY+K
Sbjct: 155 TIDYRYEAAIAREFNNFLLNGLVSRSRKPVHWCASCRTALAEAEVEYA-DQTSPSIYVKF 213
Query: 184 KLNQVPAHLLEGA---------TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
L A L +L +IWTTTPW+LPAN +A +P Y+ V G
Sbjct: 214 PLQPAAAKALAEKHPNLSPDLFPNLFLVIWTTTPWTLPANVAVALHPDFTYAAVEVNGET 273
Query: 235 VIVAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
+I+A+ LVE + + VV L + +HP RD +++ A +V+ G
Sbjct: 274 LIMAEELVEQVAAACGLGEYRVVTTLAAADLLGHSCLHPFMG--RDSRIIAADYVTLEAG 331
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TG VH AP HG++D+L L +PVL+ + ++G ++ + GP G+ IL K + L
Sbjct: 332 TGCVHTAPGHGREDYLSGLKHDLPVLSPVDDRGHFTAEGGP-YAGMFILKGNKQIIADLQ 390
Query: 354 EPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTE 390
+ L E HSYP+ WR KKPVI +A++QWFI +
Sbjct: 391 QSGALLGEQKISHSYPHCWRCKKPVIFRATEQWFIGMD 428
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPV 1164
L+ + ++G ++ + GP G+ IL K + L + L E HSYP+ WR KKPV
Sbjct: 357 LSPVDDRGHFTAEGGP-YAGMFILKGNKQIIADLQQSGALLGEQKISHSYPHCWRCKKPV 415
Query: 1165 ILKASQQWFIDTE----------RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCIS 1214
I +A++QWFI + ++ +AL + +++P ++ + +A RP WC+S
Sbjct: 416 IFRATEQWFIGMDIPAGIAGEQTTLREKALKAINNADWIPRWGRERIHGMVAGRPDWCLS 475
Query: 1215 RQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
RQR WGVPI + D ++ +E + G D W++ P+ +
Sbjct: 476 RQRAWGVPITAVWCQDCGRVLNDEKIAARITDFFTQEGADAWFARPLTDFIG 527
>gi|381198365|ref|ZP_09905703.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 947
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 231/672 (34%), Positives = 353/672 (52%), Gaps = 84/672 (12%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + ++VG I + G H PG +ALAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSVGAI-AKAG--HIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---K 488
+ + L + A L +E ATD+ +IWTTTPW+LPANQ +A + ++Y + V +
Sbjct: 221 VGFTVVDLKDLSARLNINVEAATDI--VIWTTTPWTLPANQAVAVHAEIDYQLVQVSTDR 278
Query: 489 GA-NVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 546
G N I+AK LVE+ ++ + VV DF G ++++ HP+ + R + ++ V
Sbjct: 279 GVQNFILAKDLVESAVERYKLENPVVLADFNGSAIENLLLQHPLLTD-RQVPVILGEHVI 337
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 606
++ GTG VH AP HG DD+ + L + V N + G Y P P G +I +
Sbjct: 338 ATSGTGAVHTAPGHGVDDYKVGLQYNLKVENPVGGNGVYLP-TSPIFAGEHIYKANPKII 396
Query: 607 LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNF 662
L LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL +E E++F
Sbjct: 397 EALDAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAQGLRQNALNAIENEISF 456
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN------IKHFCTLI 716
VP+ K ++ I RP WCISRQR WGVPIP F DT NE + I+ LI
Sbjct: 457 VPDWGKNRIQAMIEGRPDWCISRQRTWGVPIPFFVHKDT---NELHPRTAELIEEVAKLI 513
Query: 717 DEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVY 771
++ G D W++ + + N + D LD+WFDSG + VL+++ PA +Y
Sbjct: 514 EQEGIDAWYNREAKDFIGDEAEQYNCVR--DTLDVWFDSGTTHYAVLREREELTDPADLY 571
Query: 772 MEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQG 831
+EG DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GN+I+ DI +
Sbjct: 572 LEGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSLGNIITPQDIIKD 631
Query: 832 AKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQ 891
G D LR+W+A+ A + GK I N +
Sbjct: 632 -----------------------------MGADGLRFWIAS-ADYRYEMTAGKEIFNRAS 661
Query: 892 DDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYA 947
D ++IR++LR+LL L+ + ST ++ +D Y+L+R + Q T+ Y + +
Sbjct: 662 DGYRRIRNTLRFLLANLNGFTPSTDALPVDQLIALDQYILQRAADVQKTIQQAYEDMNFH 721
Query: 948 RASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPH 1007
+ L NF +N+L FY ++KDR Y + +AR S L+++ +R ++PI+
Sbjct: 722 IVANALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSAQTALYHLVQAFVRWMSPILSF 781
Query: 1008 LAEEVYSHLPSR 1019
A+E + +P +
Sbjct: 782 TAQEAWPLIPEQ 793
Score = 243 bits (620), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 225/408 (55%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R + GK +++LHDGPPYANG H+GHAVNK+LKDI ++S +L G YVPGWD
Sbjct: 46 IYQQIRASRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRILDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSVGAIAKAGHIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---KGA- 233
+ L + A L +E ATD+ +IWTTTPW+LPANQ +A + ++Y + V +G
Sbjct: 224 TVVDLKDLSARLNINVEAATDI--VIWTTTPWTLPANQAVAVHAEIDYQLVQVSTDRGVQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + VV DF G ++++ HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAVERYKLENPVVLADFNGSAIENLLLQHPLLTD-RQVPVILGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLQYNLKVENPVGGNGVYLP-TSPIFAGEHIYKANPKIIEAL 399
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL
Sbjct: 400 DAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAQGLRQNAL 447
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P P G +I + L LW +HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLP-TSPIFAGEHIYKANPKIIEALDAVGRLWAHQPIKHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E ++FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAQGLRQNALNAIENEISFVPDWGKNRIQAMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN------IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT NE + I+ LI++ G D W++ + + N +
Sbjct: 487 IPFFVHKDT---NELHPRTAELIEEVAKLIEQEGIDAWYNREAKDFIGDEAEQYNCVR 541
>gi|242242475|ref|ZP_04796920.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
gi|242234049|gb|EES36361.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
Length = 916
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 HELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 227/393 (57%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E P FILHDGPPYANG H+GHA+NKI+KD +R ++G YVPGWD HGLPI
Sbjct: 42 EKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMKGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ N Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-INPYITLTPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALSEEVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ +PV++ + ++G ++ + GP EG+ K L E D L ++
Sbjct: 333 DDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|420175038|ref|ZP_14681483.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM061]
gi|394244324|gb|EJD89669.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM061]
Length = 916
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 HELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 272 bits (695), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 227/393 (57%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ N Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-INPYITLTPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALSEEVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ +PV++ + ++G ++ + GP EG+ K L E D L ++
Sbjct: 333 DDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|295425123|ref|ZP_06817828.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
gi|295065182|gb|EFG56085.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
Length = 927
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 220/627 (35%), Positives = 332/627 (52%), Gaps = 67/627 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD---LHALIWTTTPWSLPANQFI 474
+ LAE+E+EYK D + SI++ P +G D + +IWTTTPW++PAN+ I
Sbjct: 191 STLAEAEVEYK-DVKANSIFVAF-----PVKDGKGIIDPENTYFVIWTTTPWTIPANEAI 244
Query: 475 AFNPALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
NP +Y V +V N +VA L+ E + W D V+ G ++ +T HP+
Sbjct: 245 CVNPKFDYVVVNVGDKNYVVAAGLLDSVAEQIGWK---DYKVIKTIKGADMEYMTAKHPL 301
Query: 531 NKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
++ L+ GF V+ GTGLVH AP G+DDF + +P+ + + QGKY+ D
Sbjct: 302 YDKE---SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQKYHLPIFSPVDAQGKYT-DE 357
Query: 590 GPGLEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P L G+ K V L + L + + HSYP+DWRTKKPVI +A+ QWF E
Sbjct: 358 VPELAGMFYQDVDKLMVQKLKDCGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEP 417
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 707
+ + L +++ +F+P K L + I R W ISRQR WGVP+P+FY D T IV
Sbjct: 418 FRKQILDQIDKASFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVAPE 477
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I+H ++++ G W+ + ++LL + N TK DILD+WFDSG SW+ V
Sbjct: 478 TIEHVAKIVEKEGTIAWYKHTAKELLPEGFTSEHSPNGEYTKEKDILDVWFDSGTSWAGV 537
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
++ + PA +Y+EG DQ GWF SSL+TSVA AP++ V GFV+D+KG KMSK
Sbjct: 538 MRKRDGLHFPADLYLEGSDQYRGWFNSSLITSVATTGLAPYKQVLSQGFVLDDKGHKMSK 597
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVIS +D+ KK+ G +++R WV A A
Sbjct: 598 SLGNVISPNDVI---KKM--------------------------GAEIIRLWV-AQADTS 627
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + +IL+ S + +KIR++ RY+L + I+ R VD YM +L +
Sbjct: 628 SDVAVSYDILSQSAESYRKIRNTFRYMLANTSDFDPEKNRIAYEDLRSVDQYMEVKLNDL 687
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y ++ ++ + + NF+ N+LS+FY KD LY ++ + AR S +++
Sbjct: 688 IRDCLAAYDKYDFSTVFKKVFNFISNDLSSFYLDFAKDVLYIEAKDSHARRSMQTVIYDA 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQ 1020
L + + PI+PH EEV+S L ++
Sbjct: 748 AVKLAKILTPILPHTMEEVWSFLKEKE 774
Score = 242 bits (618), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 158/396 (39%), Positives = 222/396 (56%), Gaps = 20/396 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMDGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ +A + I Q +F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKTMDRAKYRELCHEYAEKQIKKQMTDFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ ++ F +YK+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 158 EFEAEEIRIFGEMYKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVKANSIFVAF---- 212
Query: 188 VPAHLLEGATD---LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
P +G D + +IWTTTPW++PAN+ I NP +Y V +V N +VA L++S
Sbjct: 213 -PVKDGKGIIDPENTYFVIWTTTPWTIPANEAICVNPKFDYVVVNVGDKNYVVAAGLLDS 271
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPA 302
+ D +V+ G ++ +T HP+ ++ L+ GF V+ GTGLVH AP
Sbjct: 272 VAEQIGWKDYKVIKTIKGADMEYMTAKHPLYDKE---SLVIEGFHVTLDDGTGLVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-E 361
G+DDF + +P+ + + QGKY+ D P L G+ K V L + L +
Sbjct: 329 FGEDDFNVGQKYHLPIFSPVDAQGKYT-DEVPELAGMFYQDVDKLMVQKLKDCGALLKLK 387
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 388 VFTHSYPHDWRTKKPVIFRATTQWFASIEPFRKQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ QGKY+ D P L G+ K V L + L + + HSYP+DWRTKKPVI +
Sbjct: 348 VDAQGKYT-DEVPELAGMFYQDVDKLMVQKLKDCGALLKLKVFTHSYPHDWRTKKPVIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF E + + L ++ +F+P K L + I R W ISRQR WGVP+P+FY
Sbjct: 407 ATTQWFASIEPFRKQILDQIDKASFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFY 466
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T IV I+H ++++ G W+ ++LL
Sbjct: 467 AEDGTPIVAPETIEHVAKIVEKEGTIAWYKHTAKELL 503
>gi|303310449|ref|XP_003065237.1| isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240104897|gb|EER23092.1| isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1012
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 332/645 (51%), Gaps = 58/645 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPA----HLLEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEY+ DH+S + +K L +P H L +++A+IWTTTPW+LPAN
Sbjct: 199 GTALAEAELEYRDDHVSHAALVKFPLATMPTEIREHPLASGDEIYAVIWTTTPWTLPANA 258
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
IA + L Y V S + +++A+ E ++ + + V+ G L TY P+
Sbjct: 259 AIAVSKDLNYIIVQSERHGKLLIAESRREYVEHLLEESLKVLMSVAGTSLLSSTY-RPLF 317
Query: 532 KEQRD--LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K+ ++ FV+ G+GLVHCAP HG +D+ + L + + +G+++ A
Sbjct: 318 KDTDGSCQPIIAGDFVTDESGSGLVHCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAA 377
Query: 590 GPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWF 643
P L G ++L +G V+ +E + +L Y+H YPYDWR+K PVI++A++QWF
Sbjct: 378 MPSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWF 437
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGD 700
D I+ +A++ L V FVP+S K L + R WCISRQR WGVPIP Y G+
Sbjct: 438 ADVGDIRQQAVSALLNVRFVPQSGKARLEAFVKNRTEWCISRQRAWGVPIPALYHRGTGE 497
Query: 701 TIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL----NTSD-VNSNVTKSNDILDIWFDS 755
++ E+ + H +I + G D WW+ + + + D + D +D+WFDS
Sbjct: 498 AVLTRES-VTHIMDVIKQRGIDAWWTDNEHDIAWIPPSLRDPAGPGYARGTDTMDVWFDS 556
Query: 756 GISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK--------HTAPFRNVF 802
G SW+ + ++ + +Y+EG DQ GWF SSLLT +A + APF+ +
Sbjct: 557 GTSWTQMKENDGVESTRSDMYLEGTDQHRGWFQSSLLTHIAHQLAKGSKGHFKAPFKTLV 616
Query: 803 LHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP--- 859
HGF +D G KMSKS+GN++ H+I G P K +GAK+ P
Sbjct: 617 THGFTLDHAGRKMSKSIGNIVHPHEIMNGTLLPPLKIKKA----------KGAKEKPTAP 666
Query: 860 ---AYGVDVLRWWVA-AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSEST 915
A G D LR WVA + +KD V IG+ IL ++ + K R + R +LG L +
Sbjct: 667 VYDALGPDALRLWVAGSDYTKD--VVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKN 724
Query: 916 G---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
R D L +L + ++ +A + + + SAFY +KDR
Sbjct: 725 QIPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDR 784
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
LY DS +G +R + T+ +I+ L + P++P L EE + H P
Sbjct: 785 LYADSTDGLSRRAAQTTIFHIYSHLQSILGPLVPLLVEESWEHTP 829
Score = 327 bits (837), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 247/409 (60%), Gaps = 19/409 (4%)
Query: 6 ELYSWQREALNG-KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY+WQR +F+LHDGPPYANG HIGHA+NKILKDI R L +GKRV Y+PG
Sbjct: 42 DLYAWQRRQRPADSAQFVLHDGPPYANGDLHIGHALNKILKDIICRVQLAKGKRVEYIPG 101
Query: 65 WDCHGLPIELKAITSKDKL---LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WDCHGLPIELKA+ SK+++ L P +IR A+ A ET+ Q F WGV+ DWE N
Sbjct: 102 WDCHGLPIELKALNSKNQVGKDLGPANIRAIARQLAEETVVKQMKGFREWGVMGDWE-NH 160
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
+ T DKE+ QL F + + IYR KPVYWSPS+ TALAE+ELEY+ DHVS + +
Sbjct: 161 WKTMDKEFEMRQLEVFLEMVDKGLIYRRYKPVYWSPSTGTALAEAELEYRDDHVSHAALV 220
Query: 182 KIKLNQVPA----HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEY-SVASVKGANVI 236
K L +P H L +++A+IWTTTPW+LPAN IA + L Y V S + ++
Sbjct: 221 KFPLATMPTEIREHPLASGDEIYAVIWTTTPWTLPANAAIAVSKDLNYIIVQSERHGKLL 280
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRD--LKLLPAGFVSSSKGT 294
+A+ E ++ + ++V+ G L TY P+ K+ ++ FV+ G+
Sbjct: 281 IAESRREYVEHLLEESLKVLMSVAGTSLLSSTY-RPLFKDTDGSCQPIIAGDFVTDESGS 339
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVL 350
GLVHCAP HG +D+ + L + + +G+++ A P L G ++L +G V+
Sbjct: 340 GLVHCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVV 399
Query: 351 HLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+E + +L Y+H YPYDWR+K PVI++A++QWF D I+ +A+
Sbjct: 400 KYLEEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWFADVGDIRQQAV 448
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ +G+++ A P L G ++L EG V+ +E + +L Y+H YPYDWR+K
Sbjct: 367 VDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKHKYPYDWRSKL 426
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ +A++ L V FVP+S K L + R WCISRQR WGVP
Sbjct: 427 PVIIRATEQWFADVGDIRQQAVSALLNVRFVPQSGKARLEAFVKNRTEWCISRQRAWGVP 486
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ ++ E+ + H +I + G D WW+
Sbjct: 487 IPALYHRGTGEAVLTRES-VTHIMDVIKQRGIDAWWT 522
>gi|320033836|gb|EFW15782.1| isoleucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 1012
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 331/645 (51%), Gaps = 58/645 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPA----HLLEGATDLHALIWTTTPWSLPANQ 472
GTALAE+ELEY+ DH+S + +K L +P H L +++A+IWTTTPW+LPAN
Sbjct: 199 GTALAEAELEYRDDHVSHAALVKFPLATMPTEIREHPLASGDEIYAVIWTTTPWTLPANA 258
Query: 473 FIAFNPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
IA + L Y V S + +++A+ E ++ + + V+ G L TY P+
Sbjct: 259 AIAVSKDLNYIIVQSERHGKLLIAESRREYVEHLLEESLKVLMSVAGTSLLSSTY-RPLF 317
Query: 532 KEQRD--LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
K+ ++ FV+ G+GLVHCAP HG +D+ + L + + +G+++ A
Sbjct: 318 KDTDGSCQPIIAGDFVTDESGSGLVHCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAA 377
Query: 590 GPG----LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWF 643
P L G ++L +G V+ +E + +L Y+H YPYDWR+K PVI++A++QWF
Sbjct: 378 MPSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWF 437
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY---DGD 700
D I+ +A++ L V FVP+S K L + R WCISRQR WGVPIP Y G+
Sbjct: 438 ADVGDIRQQAVSALLNVRFVPQSGKARLEAFVKNRSEWCISRQRAWGVPIPALYHRGTGE 497
Query: 701 TIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL----NTSD-VNSNVTKSNDILDIWFDS 755
++ E+ + H +I + G D WW+ + + + D + D +D+WFDS
Sbjct: 498 AVLTRES-VTHIMDVIKQRGIDAWWTDNEHDIAWIPPSLRDPAGPGYARGTDTMDVWFDS 556
Query: 756 GISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALK--------HTAPFRNVF 802
G SW+ + ++ + +Y+EG DQ GWF SSLLT +A + APF+ +
Sbjct: 557 GTSWTQMKENDGVESTRSDMYLEGTDQHRGWFQSSLLTHIAHQLAKGSKGHFKAPFKTLV 616
Query: 803 LHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP--- 859
HGF +D G KMSKS+GN++ H+I G P K +GAK+ P
Sbjct: 617 THGFTLDHAGRKMSKSIGNIVHPHEIMNGTLLPPLKIKKA----------KGAKEKPTAP 666
Query: 860 ---AYGVDVLRWWVAAHA-SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSEST 915
A G D LR WVA +KD V IG+ IL ++ + K R + R +LG L +
Sbjct: 667 VYDALGPDALRLWVAGSDYTKD--VVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKN 724
Query: 916 G---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDR 972
R D L +L + ++ +A + + + SAFY +KDR
Sbjct: 725 QIPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDR 784
Query: 973 LYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
LY DS +G +R + T+ +I+ L + P++P L EE + H P
Sbjct: 785 LYADSTDGLSRRAAQTTIFHIYSHLQSILGPLVPLLVEESWEHTP 829
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 247/409 (60%), Gaps = 19/409 (4%)
Query: 6 ELYSWQREALNG-KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY+WQR +F+LHDGPPYANG HIGHA+NKILKDI R L +GKRV Y+PG
Sbjct: 42 DLYAWQRRQRPADSAQFVLHDGPPYANGDLHIGHALNKILKDIICRVQLAKGKRVEYIPG 101
Query: 65 WDCHGLPIELKAITSKDKL---LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WDCHGLPIELKA+ SK+++ L P +IR A+ A ET+ Q F WGV+ DWE N
Sbjct: 102 WDCHGLPIELKALNSKNQVGKDLGPANIRAIARQLAEETVVKQMKGFREWGVMGDWE-NH 160
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
+ T DKE+ QL F + + IYR KPVYWSPS+ TALAE+ELEY+ DHVS + +
Sbjct: 161 WKTMDKEFEMRQLEVFLEMVDKGLIYRRYKPVYWSPSTGTALAEAELEYRDDHVSHAALV 220
Query: 182 KIKLNQVPA----HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEY-SVASVKGANVI 236
K L +P H L +++A+IWTTTPW+LPAN IA + L Y V S + ++
Sbjct: 221 KFPLATMPTEIREHPLASGDEIYAVIWTTTPWTLPANAAIAVSKDLNYIIVQSERHGKLL 280
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRD--LKLLPAGFVSSSKGT 294
+A+ E ++ + ++V+ G L TY P+ K+ ++ FV+ G+
Sbjct: 281 IAESRREYVEHLLEESLKVLMSVAGTSLLSSTY-RPLFKDTDGSCQPIIAGDFVTDESGS 339
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGLNILGDGKDQVL 350
GLVHCAP HG +D+ + L + + +G+++ A P L G ++L +G V+
Sbjct: 340 GLVHCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVV 399
Query: 351 HLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+E + +L Y+H YPYDWR+K PVI++A++QWF D I+ +A+
Sbjct: 400 KYLEEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWFADVGDIRQQAV 448
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDAGPG----LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKK 1162
+ +G+++ A P L G ++L EG V+ +E + +L Y+H YPYDWR+K
Sbjct: 367 VDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKHKYPYDWRSKL 426
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI++A++QWF D I+ +A++ L V FVP+S K L + R WCISRQR WGVP
Sbjct: 427 PVIIRATEQWFADVGDIRQQAVSALLNVRFVPQSGKARLEAFVKNRSEWCISRQRAWGVP 486
Query: 1223 IPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
IP Y G+ ++ E+ + H +I + G D WW+
Sbjct: 487 IPALYHRGTGEAVLTRES-VTHIMDVIKQRGIDAWWT 522
>gi|398409660|ref|XP_003856295.1| hypothetical protein MYCGRDRAFT_107212 [Zymoseptoria tritici IPO323]
gi|339476180|gb|EGP91271.1| hypothetical protein MYCGRDRAFT_107212 [Zymoseptoria tritici IPO323]
Length = 1073
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 242/656 (36%), Positives = 344/656 (52%), Gaps = 66/656 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD----LHALIWTTTPWSLPANQF 473
TALAE+ELEY H + ++K+ + ++P L ++ L ALIWTTTPW+LPAN+
Sbjct: 246 TALAEAELEYDDSHKCTAAFVKMPMTRLPQVLKSHSSIRPGYLSALIWTTTPWTLPANKA 305
Query: 474 IAFNPALEYSVASVKGA-----NVIVAKCLVENL--KWTFQTDIDVVCDFPGQYL--QDI 524
IA +EY+V V G I+AK +E++ + T +V G L D+
Sbjct: 306 IAIRNDIEYTVIEVAGEFESTDQFILAKDRIEHVLSQLPGCTAKIIVNSITGSQLCDGDV 365
Query: 525 TYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI-PVLNLITNQG 583
T + + ++ A FV+++ GTGLVH AP HG DD+ + I P L + ++G
Sbjct: 366 TCFNLFTAAES--PIVHADFVTATSGTGLVHMAPGHGMDDYQVCQRLGIGPALAPVDDEG 423
Query: 584 KYSPDAGPG------LEGLNILGDGKDQVLHLVE------PD---------VLWTENYQH 622
KY+ + P LEGL++ G VL ++ PD VL ++ H
Sbjct: 424 KYTAEVFPASQGDTQLEGLDVQTAGVKAVLQILNDPSKHLPDGIHQSGESLVLAAHSFIH 483
Query: 623 SYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWC 682
P DWRTK+PVI++A+ QWF D IK ALA LE+V +PES K L+ I R WC
Sbjct: 484 KNPIDWRTKQPVIVRATAQWFADVSVIKDRALAALEDVTCIPESGKTRLKSFIEGRSQWC 543
Query: 683 ISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQ--LLNTSDV 738
ISRQR WGVPIP Y DT ++ I H ++I+E G D W+S ++ L+ S
Sbjct: 544 ISRQRAWGVPIPALYSADTGEACISLDAIDHIISVIEERGTDAWFSDPQDEPSWLHPSLE 603
Query: 739 NSNVTKSNDILDIWFDSGISWSHVL--KDKPAH---VYMEGMDQINGWFMSSLLTSVA-- 791
+ D +D+WFDSG +W+ + +D+ AH VY EG DQ GWF SSLLT++A
Sbjct: 604 PGKWVRGRDTMDVWFDSGTTWTSLAAREDEEAHLSDVYSEGTDQHRGWFQSSLLTAIASQ 663
Query: 792 ---LKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISA 848
K APFR + HGF +D +G KMSKS+GNVI+ I G+ P+ K G A
Sbjct: 664 DPDAKPLAPFRILATHGFTLDGEGRKMSKSLGNVIAPDQIISGSLLPPSKGKGKGK---A 720
Query: 849 HDITQGAKKLPAYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRSSLRYLLG 906
T +K+ G DVLR WV AS D T V I + +L S Q +QK R + ++LLG
Sbjct: 721 PPPTSKSKQQGILGPDVLRLWV---ASSDYTRDVAISQPVLQSVQQALQKYRVTFKFLLG 777
Query: 907 VLHNHSESTGSIS-----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNEL 961
VLH++ +S + D +L +L + ++ Y +++ A + FV N+L
Sbjct: 778 VLHDYPSPCPQLSLVSPLDFADRVVLDQLEKCSRSVFEAYKNYKFYAAISEVNKFVNNDL 837
Query: 962 SAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
SAFYF + KDRLY + R L I L + + P P L EEV+ +P
Sbjct: 838 SAFYFEIAKDRLYAGDLR--IRRHTQTVLVYILQELTKMLGPATPLLVEEVWEWMP 891
Score = 299 bits (766), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 183/457 (40%), Positives = 250/457 (54%), Gaps = 66/457 (14%)
Query: 6 ELYSWQREAL----NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
+LY WQR A GK EF+LHDGPPYANG H+GHA+NK+LKD+ LRS L +GK+V Y
Sbjct: 64 DLYEWQRSARESHRGGKEEFVLHDGPPYANGAVHVGHALNKVLKDLMLRSELSRGKKVQY 123
Query: 62 VPGWDCHGLPIELKAI-----------TSKD-------------KLLSPLDIRKKAKNFA 97
PGWDCHGLPIELKA+ +SKD +S L+IR A+ A
Sbjct: 124 RPGWDCHGLPIELKALQQPKAPGKQAKSSKDTPAQEARAAAYASSKMSALEIRTAARKLA 183
Query: 98 LETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSP 157
ETI TQK F+ WGV+ +W + Y T ++ QL F + ++ I R +PVYWSP
Sbjct: 184 SETIETQKKSFKDWGVMGEW-NRPYTTMSADFEARQLGVFREMVRKGLISRHHRPVYWSP 242
Query: 158 SSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATD----LHALIWTTTPWSLPA 213
SSRTALAE+ELEY H + ++K+ + ++P L ++ L ALIWTTTPW+LPA
Sbjct: 243 SSRTALAEAELEYDDSHKCTAAFVKMPMTRLPQVLKSHSSIRPGYLSALIWTTTPWTLPA 302
Query: 214 NQFIAFNPALEYSVASVKGA-----NVIVAKCLVESL--KWTFQTDIEVVCDFPGQYL-- 264
N+ IA +EY+V V G I+AK +E + + T +V G L
Sbjct: 303 NKAIAIRNDIEYTVIEVAGEFESTDQFILAKDRIEHVLSQLPGCTAKIIVNSITGSQLCD 362
Query: 265 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI-PVLNLIT 323
D+T + + ++ A FV+++ GTGLVH AP HG DD+ + I P L +
Sbjct: 363 GDVTCFNLFTAAES--PIVHADFVTATSGTGLVHMAPGHGMDDYQVCQRLGIGPALAPVD 420
Query: 324 NQGKYSPDAGPG------LEGLNILGDGKDQVLHLVE------PD---------VLWTEN 362
++GKY+ + P LEGL++ G VL ++ PD VL +
Sbjct: 421 DEGKYTAEVFPASQGDTQLEGLDVQTAGVKAVLQILNDPSKHLPDGIHQSGESLVLAAHS 480
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
+ H P DWRTK+PVI++A+ QWF D IK AL
Sbjct: 481 FIHKNPIDWRTKQPVIVRATAQWFADVSVIKDRALAA 517
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 121/258 (46%), Gaps = 29/258 (11%)
Query: 1031 VYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTV--APIMPHLAEEVYSHLP 1088
V Q G AK I+ +SI G G T N+F + A + + H+
Sbjct: 339 VLSQLPGCTAKIIV--NSITGSQLCDGDVTCFNLFTAAESPIVHADFVTATSGTGLVHMA 396
Query: 1089 SRQGT--FSSFCHFKVYHHLNLITNQGKYSPDAGPG------LEGLNILGEGKDQVLHLV 1140
G + + L + ++GKY+ + P LEGL++ G VL ++
Sbjct: 397 PGHGMDDYQVCQRLGIGPALAPVDDEGKYTAEVFPASQGDTQLEGLDVQTAGVKAVLQIL 456
Query: 1141 E------PD---------VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 1185
PD VL ++ H P DWRTK+PVI++A+ QWF D IK ALA
Sbjct: 457 NDPSKHLPDGIHQSGESLVLAAHSFIHKNPIDWRTKQPVIVRATAQWFADVSVIKDRALA 516
Query: 1186 CLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFC 1243
LE V +PES K L+ I R WCISRQR WGVPIP Y DT ++ I H
Sbjct: 517 ALEDVTCIPESGKTRLKSFIEGRSQWCISRQRAWGVPIPALYSADTGEACISLDAIDHII 576
Query: 1244 TLIDEHGPDFWWSLPVEQ 1261
++I+E G D W+S P ++
Sbjct: 577 SVIEERGTDAWFSDPQDE 594
>gi|375089436|ref|ZP_09735762.1| isoleucine-tRNA ligase [Facklamia languida CCUG 37842]
gi|374566834|gb|EHR38068.1| isoleucine-tRNA ligase [Facklamia languida CCUG 37842]
Length = 927
Score = 353 bits (907), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 221/624 (35%), Positives = 329/624 (52%), Gaps = 59/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SIY+ K+ + + A +IWTTTPW+LPAN I+
Sbjct: 192 SSLAEAEVEYQ-DVTSPSIYVAFKVRDGKGVVADNA---EFIIWTTTPWTLPANLGISVK 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P EY +V + I+A+ L+E++ D V F G +T HP R+
Sbjct: 248 PDAEYVQVAVGDRHFILAQDLLESVSQAIGWQDYQVEATFRGDQFDRLTASHPFYD--RE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L+ V+ GTGLVH AP HG+DD+ + L + +L+ + ++G Y+ D PGLEG+
Sbjct: 306 SLLMLGDHVTLDSGTGLVHTAPGHGEDDYWIGLEYGLDILSPVDSRGHYT-DQAPGLEGV 364
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
L G+ Q+L ++E + +L + HSYP+DWRTKKPVI +A+ QWF +R + E L
Sbjct: 365 FYL-KGEKQILEMIEANGSLLHYSEFVHSYPHDWRTKKPVIYRATPQWFASIDRFRQELL 423
Query: 655 ACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
+E V + S ++ + + I R W ISRQRVWGVP+P+FY DG I+ E I H
Sbjct: 424 DNVENSVKWHHPSGQRRIYNMIRDRGDWVISRQRVWGVPLPIFYAEDGQAILDLEV-INH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L+ EHG + W+ + LL + N TK DI+D+WFDSG S++ VL+ +
Sbjct: 483 VADLVAEHGSNIWFEWEAKDLLPQNFSHEGSPNGIFTKEMDIMDVWFDSGTSYAGVLQVR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A++Y+EG DQ GWF SS TS+A P++ V GFV D KG KMSKS+GN
Sbjct: 543 PELVYPANLYLEGSDQYRGWFNSSFTTSIAAFGQPPYQEVLSQGFVNDGKGQKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI AK + G D++R WVA+ + V
Sbjct: 603 VIDP-----------------------------AKVMEELGADIIRLWVAS-VDYESDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
+ IL + +KIR+++R++LG++++ S + +D YM +F+ M
Sbjct: 633 VSNEILKQVSESYRKIRNTIRFMLGLVNDFDPSQHQVDGDHLALIDQYMHANFNQFKADM 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y ++Y + L+NFV +LSAFY + KD +Y ++ + R S ++ I H L
Sbjct: 693 IQYYESYRYPELYKRLMNFVSTDLSAFYLDVAKDIVYIEAADSPVRRSMQTVIYQILHDL 752
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQG 1021
L V PI+ H AEE + L G
Sbjct: 753 LILVTPILVHTAEEAWKSLNGVDG 776
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 232/404 (57%), Gaps = 27/404 (6%)
Query: 10 WQREALNGKPE--------FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
WQ +A+ K + ++LHDGPPYANG H+GHA+NKI KD +R + G R Y
Sbjct: 31 WQDQAMYDKIQEKNQDRTPWVLHDGPPYANGNIHMGHALNKISKDFIVRYKSMAGMRSPY 90
Query: 62 VPGWDCHGLPIEL-----KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLAD 116
VPGWD HGLPIE K + KD S + R +++ALE + QKA F+ GV D
Sbjct: 91 VPGWDTHGLPIETALQKNKKVNRKD--YSTAEFRNMCRDYALEQVEGQKATFKRLGVTGD 148
Query: 117 WEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVS 176
W+H Y T D EY QL F + + YIY+ KP++WS SS ++LAE+E+EY+ D S
Sbjct: 149 WDH-PYLTLDPEYEAQQLRVFGLMADKGYIYKGAKPIFWSWSSESSLAEAEVEYQ-DVTS 206
Query: 177 KSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVI 236
SIY+ K+ + + A +IWTTTPW+LPAN I+ P EY +V + I
Sbjct: 207 PSIYVAFKVRDGKGVVADNA---EFIIWTTTPWTLPANLGISVKPDAEYVQVAVGDRHFI 263
Query: 237 VAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+A+ L+ES+ D +V F G +T HP R+ L+ V+ GTG
Sbjct: 264 LAQDLLESVSQAIGWQDYQVEATFRGDQFDRLTASHPFYD--RESLLMLGDHVTLDSGTG 321
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
LVH AP HG+DD+ + L + +L+ + ++G Y+ D PGLEG+ L G+ Q+L ++E
Sbjct: 322 LVHTAPGHGEDDYWIGLEYGLDILSPVDSRGHYT-DQAPGLEGVFYL-KGEKQILEMIEA 379
Query: 356 D--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +L + HSYP+DWRTKKPVI +A+ QWF +R + E L
Sbjct: 380 NGSLLHYSEFVHSYPHDWRTKKPVIYRATPQWFASIDRFRQELL 423
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 99/163 (60%), Gaps = 8/163 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + ++G Y+ D PGLEG+ L +G+ Q+L ++E + +L + HSYP+DWRTKKP
Sbjct: 345 LSPVDSRGHYT-DQAPGLEGVFYL-KGEKQILEMIEANGSLLHYSEFVHSYPHDWRTKKP 402
Query: 1164 VILKASQQWFIDTERIKPEALACLE-GVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
VI +A+ QWF +R + E L +E V + S ++ + + I R W ISRQRVWGVP
Sbjct: 403 VIYRATPQWFASIDRFRQELLDNVENSVKWHHPSGQRRIYNMIRDRGDWVISRQRVWGVP 462
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+P+FY DG I+ E I H L+ EHG + W+ + LL
Sbjct: 463 LPIFYAEDGQAILDLEV-INHVADLVAEHGSNIWFEWEAKDLL 504
>gi|256846981|ref|ZP_05552427.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
gi|256715645|gb|EEU30620.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
Length = 931
Score = 353 bits (907), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 215/625 (34%), Positives = 328/625 (52%), Gaps = 69/625 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ L D + ++WTTTPW++PA++ +A N
Sbjct: 191 SALAEAEVEYH-DVVAKTAFFAEQVKDGKGVL---DNDTYLVVWTTTPWTVPASEAVAIN 246
Query: 478 PALEYSVASVKGAN-----VIVAKCLVE---NLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
P EY+V VK AN V+ + L E L W +VV GQ L+ +T HP
Sbjct: 247 PDFEYAV--VKPANDDRKFVVASSRLAEIADKLDWG---SYEVVKTVKGQELEYVTTQHP 301
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
R+L + +V+ GTGLVH AP +G DD+ +P+L + +QG + +
Sbjct: 302 Y--LDRELLVGLGDYVTDDTGTGLVHTAPGYGDDDYWFGKKYDLPILAPMNDQGVLTAEN 359
Query: 590 GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
GP +G+ D L L+E +L E +HSYP+DWRTK+P++ +A+ QWF+ +
Sbjct: 360 GPEFDGV-FYQKADDVSLKLLEEKNALLLEEPLKHSYPFDWRTKQPIVFRATDQWFVSID 418
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNE 706
+++ E L ++EV + PE K LR+ + R W ISRQRVWGVP+P+FY D T I+ E
Sbjct: 419 KMRDEILKAVDEVKYFPEWGKVRLRNMLKDRGDWVISRQRVWGVPLPIFYAEDGTPIMTE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
I H L+ E+G + W+ + LL + N TK DI+D+WFDSG S
Sbjct: 479 ETINHVADLLREYGSNVWFEREAKDLLPDGFTSPHSPNGEFTKETDIMDVWFDSGSSHQG 538
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL ++ PA +Y+EG DQ GWF SS++TSV + AP+++V GF +D+KG KMS
Sbjct: 539 VLNERSYLTYPADLYLEGSDQYRGWFNSSMITSVVVSGHAPYKSVLSQGFTLDKKGKKMS 598
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHAS 875
KS+GNVI AK + G +++R WV +A S
Sbjct: 599 KSLGNVIDP-----------------------------AKVVQQMGAEIIRLWVMSADTS 629
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
D V +G + +K+R++ R+LL + ++S VD YML +
Sbjct: 630 ADVRVSMG--TFQQISEAYRKLRNTFRFLLANTSDFDADENTVSYEKLTSVDQYMLVKFN 687
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
+F M + + + ++L+NFV N+LSAFY + KD LY N R S +
Sbjct: 688 QFLAKMRDEFDAYDFLDGYKLLINFVNNDLSAFYMNVAKDVLYIQPANSLERRSMQTVFY 747
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
I L++ + PI+PH EEV+ ++
Sbjct: 748 QILVGLVKLLTPILPHTTEEVWGYM 772
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 230/400 (57%), Gaps = 26/400 (6%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPTFVLHDGPPYANGNIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHG 98
Query: 70 LPIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE + S K +S + R + +ALE + Q A F+ GV DW+H Y T DK
Sbjct: 99 LPIEHQLTKSGYDRKKMSTAEFRDLCRKYALEQVQKQMAGFKRLGVSGDWDH-PYLTLDK 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F + K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++
Sbjct: 158 EFEAAQIKVFGDFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFAEQVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-----VIVAKCLV 242
L D + ++WTTTPW++PA++ +A NP EY+V VK AN V+ + L
Sbjct: 217 GKGVL---DNDTYLVVWTTTPWTVPASEAVAINPDFEYAV--VKPANDDRKFVVASSRLA 271
Query: 243 E---SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
E L W EVV GQ L+ +T HP R+L + +V+ GTGLVH
Sbjct: 272 EIADKLDW---GSYEVVKTVKGQELEYVTTQHPY--LDRELLVGLGDYVTDDTGTGLVHT 326
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--V 357
AP +G DD+ +P+L + +QG + + GP +G+ D L L+E +
Sbjct: 327 APGYGDDDYWFGKKYDLPILAPMNDQGVLTAENGPEFDGV-FYQKADDVSLKLLEEKNAL 385
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E +HSYP+DWRTK+P++ +A+ QWF+ ++++ E L
Sbjct: 386 LLEEPLKHSYPFDWRTKQPIVFRATDQWFVSIDKMRDEIL 425
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 94/158 (59%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ +QG + + GP +G+ + D L L+E +L E +HSYP+DWRTK+P++
Sbjct: 349 MNDQGVLTAENGPEFDGV-FYQKADDVSLKLLEEKNALLLEEPLKHSYPFDWRTKQPIVF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ ++++ E L ++ V + PE K LR+ + R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIDKMRDEILKAVDEVKYFPEWGKVRLRNMLKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L+ E+G + W+ + LL
Sbjct: 468 YAEDGTPIMTEETINHVADLLREYGSNVWFEREAKDLL 505
>gi|410455447|ref|ZP_11309327.1| isoleucyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
gi|409929274|gb|EKN66359.1| isoleucyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
Length = 923
Score = 353 bits (907), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 225/639 (35%), Positives = 331/639 (51%), Gaps = 56/639 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L TD+ +IWTTTPW++PAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKRSASIYVGFNVKDGKGVL---DTDIQIVIWTTTPWTIPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L Y V SV ++A+ L+E + K D V+ G L+ I +HP+ RD
Sbjct: 247 PDLTYVVVSVNDKKFLIAEALLEAVTKEIGWEDAVVIQKVKGAELERIVAVHPLY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF + + VL + ++G + +A PG EGL
Sbjct: 305 SLVMLGEHVTTDAGTGCVHTAPGHGEDDFYIGQKYGLDVLCPVDDKGVMTSEA-PGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L + L ++ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 364 FYDTANKPIAQALEDAGALLKLSFITHSYPHDWRTKKPVIYRATAQWFASIKDFRDDLLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + + R WCISRQRVWGVPIPVFY +G+ II +E I H
Sbjct: 424 AVKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGEEIITDE-TINHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L E+G + W+ ++LL + N TK DI+D+WFDSG S VL ++
Sbjct: 483 NLFRENGSNIWFEREAKELLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHQAVLLERED 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GN +
Sbjct: 543 LVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSLGNTV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WVA+ V +
Sbjct: 603 -----------VPA------------------KVMNQLGADILRLWVAS-VDYQADVRVS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG L + + +S R VD +ML +L + +
Sbjct: 633 DAILKQVAEVYRKIRNTFRFLLGNLADFDPTVNKVSYENLREVDQFMLVKLNKLIKYVRN 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +++A + NF +LSAFY KD LY ++ N R + L+ L +
Sbjct: 693 AYENYEFAGIYHAVNNFCTLDLSAFYLDFAKDVLYIEAENHHDRRAIQTVLYESLLALTK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
V+PI+ H A+EV+ +P+ Q F Y + +GS
Sbjct: 753 LVSPILSHTADEVWKFIPNVQEESVQLTDFPEYRELAGS 791
Score = 289 bits (740), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 233/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NKILKD+ +R + G R YVPGWD
Sbjct: 36 IYQMVQERTKGRPIFVLHDGPPYANGDIHMGHAMNKILKDMIVRYKSMSGFRAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + R+ +ALE I+ Q+ +F+ GV DWE N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRELCTKYALEQIDNQRTQFKRLGVRGDWE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSASIYVGF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L TD+ +IWTTTPW++PAN I+ +P L Y V SV ++A+ L+E
Sbjct: 213 NVKDGKGVL---DTDIQIVIWTTTPWTIPANLGISVHPDLTYVVVSVNDKKFLIAEALLE 269
Query: 244 SL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
++ K D V+ G L+ I +HP+ RD ++ V++ GTG VH AP
Sbjct: 270 AVTKEIGWEDAVVIQKVKGAELERIVAVHPLY--DRDSLVMLGEHVTTDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF + + VL + ++G + +A PG EGL K L + L +
Sbjct: 328 HGEDDFYIGQKYGLDVLCPVDDKGVMTSEA-PGFEGLFYDTANKPIAQALEDAGALLKLS 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 387 FITHSYPHDWRTKKPVIYRATAQWFASIKDFRDDLL 422
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL K L + L ++ HSYP+DWRTKKPVI +
Sbjct: 347 VDDKGVMTSEA-PGFEGLFYDTANKPIAQALEDAGALLKLSFITHSYPHDWRTKKPVIYR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ +VP + L + + R WCISRQRVWGVPIPVFY
Sbjct: 406 ATAQWFASIKDFRDDLLEAVKETKWVPAWGETRLFNMVRDRGDWCISRQRVWGVPIPVFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L E+G + W+ ++LL
Sbjct: 466 AENGEEIITDE-TINHVSNLFRENGSNIWFEREAKELL 502
>gi|312872405|ref|ZP_07732474.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
gi|311091987|gb|EFQ50362.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
Length = 928
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 332/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D +VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYNVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 EAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 229/400 (57%), Gaps = 17/400 (4%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VP
Sbjct: 34 NDLYE-QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H
Sbjct: 93 GWDTHGLPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF ++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
KL + L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L
Sbjct: 211 AFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGL 268
Query: 242 VESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHC 299
+E + D VV F G ++ + HPI ++ L+ GF V+ GTGLVH
Sbjct: 269 LEKVAQEIGWDEYNVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP G DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGAL 383
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + + HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 384 LKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|71082864|ref|YP_265583.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
gi|91762713|ref|ZP_01264678.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
gi|84029526|sp|Q4FPA9.1|SYI_PELUB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|71061977|gb|AAZ20980.1| Isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
gi|91718515|gb|EAS85165.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
Length = 905
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 224/663 (33%), Positives = 352/663 (53%), Gaps = 84/663 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+EY+ DH S +IY + + LE TD+ +IWTTTPW++PAN+ +A+N
Sbjct: 194 TALADAEVEYQ-DHKSDTIYTAFPVKKTNIKELEN-TDV--IIWTTTPWTIPANKALAYN 249
Query: 478 PALEYSVASV------KGANVIVAKCLVENL-------------KWTFQTDIDVVCDFPG 518
AL+Y + + K ++VA+ L+E++ K+ + D +C P
Sbjct: 250 EALDYLIIELGDEGDFKNKKIVVAEALLESVIKDCEIKSYKEIKKFKGKDFKDTICSHP- 308
Query: 519 QYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNL 578
++ Y + D+ +L A FV++ +GTG+VHCAP+HG DDF L L I +
Sbjct: 309 --FLELGYDY-------DIPMLEARFVTTEQGTGIVHCAPSHGPDDFNLCLKYGIKAIET 359
Query: 579 ITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 637
+ GKY+ + P EG +I + L E L + HSYP+ WR+K P++ +
Sbjct: 360 VDGDGKYTKNL-PLFEGTHIFKANPIVIEKLKEQKKLLSNGELVHSYPHSWRSKAPLVHR 418
Query: 638 ASQQWFIDTER--IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPV 695
A+ QWFI E ++ +AL L++ F P+ ++ ++ I RP WC+SRQRVWGVP+P+
Sbjct: 419 ATPQWFISMESHGLRKKALKALDDTKFYPDKGRERIKAMIETRPDWCVSRQRVWGVPLPI 478
Query: 696 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWF 753
F T I+V++ ++ ++ ++ G D W+S S ++ L + K +DI+++WF
Sbjct: 479 FVHKTTKEILVDDNVNENIASIYEKEGSDCWFSDSPQRFLGDKYKAEDYEKISDIVEVWF 538
Query: 754 DSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVV 808
DSG + + VL+ + PA +Y+EG DQ GWF SSLL S + AP+ ++ HGFVV
Sbjct: 539 DSGCTHAFVLEKREDLQWPASMYLEGSDQHRGWFHSSLLESCGTRGRAPYESILSHGFVV 598
Query: 809 DEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRW 868
D KG KMSKSVGNV I+ DI L YG D+LR
Sbjct: 599 DGKGLKMSKSVGNV-----------------------IAPEDI------LKKYGADILRI 629
Query: 869 WVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYV------ 922
WVA+ ++ + I +IL D +KIR++ RYLLG L++ + S +
Sbjct: 630 WVAS-SNYAEDLRIDYSILEQHADSYRKIRNTFRYLLGNLNDDFQKIDLESLDIKQLPEL 688
Query: 923 DVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEA 982
+ YML R+ E N + + + + LLNF +LS+FYF + KD LYCDS N +
Sbjct: 689 ERYMLHRVYELNNNFKNYFKSYDFHNLYKELLNFCTVDLSSFYFDIRKDALYCDSKNSDR 748
Query: 983 RLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKR 1042
R S + L+ I L++ API+ EE+++ + Q + H + +++Y S
Sbjct: 749 RKSSIVVLNIILESLVKWFAPILSFTTEEIFTLINKEQKSI----HLEQFMKYPESFQDE 804
Query: 1043 ILY 1045
L+
Sbjct: 805 ELH 807
Score = 250 bits (638), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 222/402 (55%), Gaps = 24/402 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY R++ GK +FILHDGPPYANG H+G A+NKILKDI ++ + + GK YVPGW
Sbjct: 34 DLYKELRKSNKGKEKFILHDGPPYANGNIHMGTALNKILKDIIVKFHQMDGKDSVYVPGW 93
Query: 66 DCHGLPIELK------AITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIE K + + RK+ + FA + I K +F+ GV+ DWE
Sbjct: 94 DCHGLPIEWKIEEQYKKNKKNKNEVPITEFRKECREFAEKWIEVHKTQFKRLGVVGDWE- 152
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N Y T E + + K+ +YR KPV WS +TALA++E+EY+ DH S +I
Sbjct: 153 NHYATMSFEAEAQIVRELGKFLKEGSLYRGFKPVLWSTVEKTALADAEVEYQ-DHKSDTI 211
Query: 180 YLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV------ASVKGA 233
Y + + LE TD+ +IWTTTPW++PAN+ +A+N AL+Y + K
Sbjct: 212 YTAFPVKKTNIKELEN-TDV--IIWTTTPWTIPANKALAYNEALDYLIIELGDEGDFKNK 268
Query: 234 NVIVAKCLVESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINK--EQRDLKLLPAGFVS 289
++VA+ L+ES+ ++ E+ + I HP + D+ +L A FV+
Sbjct: 269 KIVVAEALLESVIKDCEIKSYKEIKKFKGKDFKDTICS-HPFLELGYDYDIPMLEARFVT 327
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 349
+ +GTG+VHCAP+HG DDF L L I + + GKY+ + P EG +I +
Sbjct: 328 TEQGTGIVHCAPSHGPDDFNLCLKYGIKAIETVDGDGKYTKNL-PLFEGTHIFKANPIVI 386
Query: 350 LHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTE 390
L E L + HSYP+ WR+K P++ +A+ QWFI E
Sbjct: 387 EKLKEQKKLLSNGELVHSYPHSWRSKAPLVHRATPQWFISME 428
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPV 1164
+ + GKY+ + P EG +I + L E L + HSYP+ WR+K P+
Sbjct: 357 IETVDGDGKYTKNL-PLFEGTHIFKANPIVIEKLKEQKKLLSNGELVHSYPHSWRSKAPL 415
Query: 1165 ILKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+ +A+ QWFI E ++ +AL L+ F P+ ++ ++ I RP WC+SRQRVWGVP
Sbjct: 416 VHRATPQWFISMESHGLRKKALKALDDTKFYPDKGRERIKAMIETRPDWCVSRQRVWGVP 475
Query: 1223 IPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+P+F T I+V++ ++ ++ ++ G D W+S ++ L
Sbjct: 476 LPIFVHKTTKEILVDDNVNENIASIYEKEGSDCWFSDSPQRFL 518
>gi|387761538|ref|YP_006068515.1| isoleucine-tRNA ligase [Streptococcus salivarius 57.I]
gi|339292305|gb|AEJ53652.1| isoleucine-tRNA ligase [Streptococcus salivarius 57.I]
Length = 932
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 212/617 (34%), Positives = 324/617 (52%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G N +VA L+ +L F TD++V+ + G+ L I HP + E
Sbjct: 247 ADIEYVLVKPAGENRKFVVASELLNSLSEKFGWTDVEVLQSYRGEELNQIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANNGVAPYKQLLSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + + + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDTTN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +T +++ R VD YM R + T+
Sbjct: 635 MDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVKTIRD 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ + L+NF+ ELSAFY KD +Y +S R ++I + +
Sbjct: 695 AYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+ PI+PH AEE++S+L
Sbjct: 755 LLTPILPHTAEEIWSYL 771
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 225/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G YVPG
Sbjct: 34 AKMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGGMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G N +VA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGENRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD+EV+ + G+ L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVEVLQSYRGEELNQIVTEHPWDTEVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L +EHG WW + LL
Sbjct: 469 EDKTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|367009976|ref|XP_003679489.1| hypothetical protein TDEL_0B01490 [Torulaspora delbrueckii]
gi|359747147|emb|CCE90278.1| hypothetical protein TDEL_0B01490 [Torulaspora delbrueckii]
Length = 999
Score = 353 bits (906), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 232/655 (35%), Positives = 331/655 (50%), Gaps = 80/655 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN---------QVPAHLL-------EGATDLHALIW 461
TALAE ELEY H S + Y+K L ++P +++ E ++ LIW
Sbjct: 226 TALAEGELEYNETHKSTAAYVKFPLTSESNLQFLERLPINVMVKYLVDKERNDTINCLIW 285
Query: 462 TTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
T+TPW+L +N+ I FN YS+ ++ ++ IV + L+ENLK +V+ FPG L
Sbjct: 286 TSTPWTLFSNRAICFNERFNYSLVLLQDSSFIVEENLLENLK--LDEPYEVLATFPGTTL 343
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+ Y P ++ LL V+ S GTGLVH AP HG DD+L+ L + + + + +
Sbjct: 344 TGLYYTQPSLRDGVPRPLLNGDHVTGSTGTGLVHTAPGHGSDDYLIGLQNDLDIFSPVDH 403
Query: 582 QGKYSPDAGPGL---------EGL--NILGDGKDQVLHLVEPDVLWT----ENYQHSYPY 626
G+Y D P GL +L V+ + E + L T Y HSYPY
Sbjct: 404 TGRYKLDDLPQHLHDTLKEPDSGLPRKVLDPATASVI-IEELERLGTLHHSHEYVHSYPY 462
Query: 627 DWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQ 686
DWR+KKPV+++A+ QWF D +K AL L VNF PE + L I R WCISRQ
Sbjct: 463 DWRSKKPVVIRATPQWFADLHDVKGLALNSLGRVNFHPERGRARLSSFIKSRNEWCISRQ 522
Query: 687 RVWGVPIPVFYDGDT---IIVNEANIKHFCTLIDEHGPDFWWSLS---VEQLLNTS--DV 738
R WGVPIP Y D ++ E + H +I G + W+S + +E+ L +S
Sbjct: 523 RSWGVPIPALYKKDAPDVALMTEETVTHIIDVIRRKGINSWFSQNESDMEEWLPSSLKGE 582
Query: 739 NSNVTKSNDILDIWFDSGISWSHV------------LKDKPAHVYMEGMDQINGWFMSSL 786
+N + D +D+WFDSG SWS + L D A Y+EG DQ GWF SSL
Sbjct: 583 AANYFRGKDTMDVWFDSGTSWSVIEKFYTETLKMKNLPDVLADAYLEGSDQHRGWFQSSL 642
Query: 787 LTSVALKHT--APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGN 844
LT VA + AP++N+ HGF +DE G KMSKS+GN IS + +G +KL
Sbjct: 643 LTKVAQSGSPIAPYKNLITHGFTLDENGVKMSKSIGNTISPKAVIEGDQKL--------- 693
Query: 845 VISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYL 904
LP+ GVD LR+ V A A+ + G I+N D ++K+R S R+L
Sbjct: 694 ------------GLPSLGVDGLRYLV-ARANYTTDIVAGPTIMNHVADALKKLRLSFRFL 740
Query: 905 LGVLHNHSESTGSIS--RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELS 962
LG L S S R VD Y + +L E + Y + +++ + + N+LS
Sbjct: 741 LGNLQVGSHKLLSCEELRPVDKYTIGKLQELLTIVKQEYQNYNFSKVLTTVQHHTANQLS 800
Query: 963 AFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
AFYF L KD LY D+ + R TL +I + PI+P L +EV++++P
Sbjct: 801 AFYFDLSKDTLYSDAKDSLKRQQVQTTLFHILDTYRAILMPILPVLIQEVWNYVP 855
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 239/436 (54%), Gaps = 45/436 (10%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA---I 77
FILHDGPPYANG H+GHA+NKI+KDI R L QGK V+Y PGWDCHGLPIE+KA I
Sbjct: 83 FILHDGPPYANGDLHLGHALNKIIKDIINRYELSQGKYVYYKPGWDCHGLPIEMKALKDI 142
Query: 78 TSKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+S+ +S +R A A + I QK +F+ + +L DWE + Y+T +Y +QL
Sbjct: 143 SSEGVASISRGKVRSMAAAHATKAIKAQKKQFKQFAILTDWE-DYYNTMSPQYEIDQLEV 201
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLN---------Q 187
F + K+ I R KPV+W +RTALAE ELEY H S + Y+K L +
Sbjct: 202 FLQMLKRGLIKRQNKPVFWGTETRTALAEGELEYNETHKSTAAYVKFPLTSESNLQFLER 261
Query: 188 VPAHLL-------EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+P +++ E ++ LIWT+TPW+L +N+ I FN YS+ ++ ++ IV +
Sbjct: 262 LPINVMVKYLVDKERNDTINCLIWTSTPWTLFSNRAICFNERFNYSLVLLQDSSFIVEEN 321
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L+E+LK EV+ FPG L + Y P ++ LL V+ S GTGLVH A
Sbjct: 322 LLENLK--LDEPYEVLATFPGTTLTGLYYTQPSLRDGVPRPLLNGDHVTGSTGTGLVHTA 379
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL---------EGL--NILGDGKDQV 349
P HG DD+L+ L + + + + + G+Y D P GL +L V
Sbjct: 380 PGHGSDDYLIGLQNDLDIFSPVDHTGRYKLDDLPQHLHDTLKEPDSGLPRKVLDPATASV 439
Query: 350 LHLVEPDVLWT----ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+ + E + L T Y HSYPYDWR+KKPV+++A+ QWF D +K AL N
Sbjct: 440 I-IEELERLGTLHHSHEYVHSYPYDWRSKKPVVIRATPQWFADLHDVKGLAL------NS 492
Query: 406 LGRVGITHDRPGTALA 421
LGRV +R L+
Sbjct: 493 LGRVNFHPERGRARLS 508
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 1147 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIA 1206
+ Y HSYPYDWR+KKPV+++A+ QWF D +K AL L VNF PE + L I
Sbjct: 453 SHEYVHSYPYDWRSKKPVVIRATPQWFADLHDVKGLALNSLGRVNFHPERGRARLSSFIK 512
Query: 1207 QRPYWCISRQRVWGVPIPVFYDGDT---IIVNEANIKHFCTLIDEHGPDFWWS 1256
R WCISRQR WGVPIP Y D ++ E + H +I G + W+S
Sbjct: 513 SRNEWCISRQRSWGVPIPALYKKDAPDVALMTEETVTHIIDVIRRKGINSWFS 565
>gi|262370952|ref|ZP_06064275.1| isoleucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262314028|gb|EEY95072.1| isoleucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 947
Score = 353 bits (906), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 231/672 (34%), Positives = 353/672 (52%), Gaps = 84/672 (12%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + ++VG I + G H PG +ALAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSVGAI-AKAG--HIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---K 488
+ + L + A L +E ATD+ +IWTTTPW+LPANQ +A + ++Y + V +
Sbjct: 221 VGFTVVDLKDLSARLNINVEAATDI--VIWTTTPWTLPANQAVAVHAEIDYQLVQVSTDR 278
Query: 489 GA-NVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 546
G N I+AK LVE+ ++ + VV DF G ++++ HP+ + R + ++ V
Sbjct: 279 GVQNFILAKDLVESAVERYKLENPVVLADFNGSAIENLLLQHPLLTD-RQVPVILGEHVI 337
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 606
++ GTG VH AP HG DD+ + L + V N + G Y P + P G +I +
Sbjct: 338 ATSGTGAVHTAPGHGVDDYKVGLQYNLKVENPVGGNGVYLPTS-PIFAGEHIYKANPKII 396
Query: 607 LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNF 662
L LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL +E E++F
Sbjct: 397 ETLGAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAQGLRQNALNAIENEISF 456
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN------IKHFCTLI 716
VP+ K ++ I RP WCISRQR WGVPIP F DT NE + I+ LI
Sbjct: 457 VPDWGKNRIQAMIEGRPDWCISRQRTWGVPIPFFVHKDT---NELHPRTAELIEEVAKLI 513
Query: 717 DEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVY 771
++ G D W++ + + N + D LD+WFDSG + VL+++ PA +Y
Sbjct: 514 EQEGIDAWYNREAKDFIGDEAEQYNCVR--DTLDVWFDSGTTHYAVLREREELTDPADLY 571
Query: 772 MEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQG 831
+EG DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GN+I+ DI +
Sbjct: 572 LEGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSLGNIITPQDIIKD 631
Query: 832 AKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQ 891
G D LR+W+A+ A + GK I N +
Sbjct: 632 -----------------------------MGADGLRFWIAS-ADYRYEMTAGKEIFNRAS 661
Query: 892 DDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYA 947
D ++IR++LR+LL L+ ST ++ +D Y+L+R + Q T+ Y + +
Sbjct: 662 DGYRRIRNTLRFLLANLNGFKPSTDALPVDQLIALDQYILQRAADVQKTIQQAYEDMNFH 721
Query: 948 RASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPH 1007
+ L NF +N+L FY ++KDR Y + +AR S L+++ +R ++PI+
Sbjct: 722 IVANALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSAQTALYHLVQAFVRWMSPILSF 781
Query: 1008 LAEEVYSHLPSR 1019
A+E + +P +
Sbjct: 782 TAQEAWPLIPEQ 793
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 226/408 (55%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R + GK +++LHDGPPYANG H+GHAVNK+LKDI ++S +L G YVPGWD
Sbjct: 46 IYQQIRASRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRILDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSVGAIAKAGHIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---KGA- 233
+ L + A L +E ATD+ +IWTTTPW+LPANQ +A + ++Y + V +G
Sbjct: 224 TVVDLKDLSARLNINVEAATDI--VIWTTTPWTLPANQAVAVHAEIDYQLVQVSTDRGVQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + VV DF G ++++ HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAVERYKLENPVVLADFNGSAIENLLLQHPLLTD-RQVPVILGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P + P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLQYNLKVENPVGGNGVYLPTS-PIFAGEHIYKANPKIIETL 399
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL
Sbjct: 400 GAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAQGLRQNAL 447
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P + P G +I + L LW +HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTS-PIFAGEHIYKANPKIIETLGAVGRLWAHQPIKHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E ++FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAQGLRQNALNAIENEISFVPDWGKNRIQAMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN------IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT NE + I+ LI++ G D W++ + + N +
Sbjct: 487 IPFFVHKDT---NELHPRTAELIEEVAKLIEQEGIDAWYNREAKDFIGDEAEQYNCVR 541
>gi|262374478|ref|ZP_06067752.1| isoleucyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262310474|gb|EEY91564.1| isoleucyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 945
Score = 353 bits (906), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 229/673 (34%), Positives = 351/673 (52%), Gaps = 78/673 (11%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + +++G I + G H PG +ALAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSLGAI-AKAG--HIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---K 488
+ I L + A L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + V +
Sbjct: 221 VGFTVIDLKDLSARLSIDVQDVTDI--VIWTTTPWTLPANQAVAVHADIDYQLVQVSTER 278
Query: 489 GA-NVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 546
G+ N I+AK LVE+ ++ + VV DF G ++ + HP+ + R + ++ V
Sbjct: 279 GSQNFILAKDLVESAIERYKLENPVVLADFKGAVIEKLLLQHPLITD-RQVPVIVGEHVI 337
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 606
++ GTG VH AP HG DD+ + L + V N + G Y P A P G +I +
Sbjct: 338 ATSGTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGVYLPTA-PIFAGEHIYKANPKII 396
Query: 607 LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNF 662
L LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL +E ++ F
Sbjct: 397 EALGAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQTALNAIENDIEF 456
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN---IKHFCTLIDEH 719
VP+ K ++ I RP WCISRQR WGVPIP F DT ++ I+ LI++
Sbjct: 457 VPDWGKNRIQSMIEGRPDWCISRQRTWGVPIPFFVHKDTNALHPRTPELIEEVAKLIEQE 516
Query: 720 GPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEG 774
G D W++ + N + D LD+WFDSG + VL+++ PA +Y+EG
Sbjct: 517 GIDGWYNRDASDFIGADAEQYNAVR--DTLDVWFDSGTTHYAVLREREELQDPADLYLEG 574
Query: 775 MDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKK 834
DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GN+I+ DI +
Sbjct: 575 SDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSLGNIITPQDIIKD--- 631
Query: 835 LPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDV 894
G D LR+W+A+ A + GK I + + D
Sbjct: 632 --------------------------MGADGLRFWIAS-ADYRYEMTAGKEIFSRASDGY 664
Query: 895 QKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARAS 950
++IR++LR+LL L+ ST ++ +D Y+L+R E Q T+ Y E + +
Sbjct: 665 RRIRNTLRFLLANLNGFKPSTDALPVNELIALDQYILQRAAEVQKTIQQAYEEMNFHIVT 724
Query: 951 RVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAE 1010
L NF +N+L FY ++KDR Y + +AR S L+++ +R ++PI+ A+
Sbjct: 725 NALTNFCINDLGGFYLDIIKDRQYTTKADSQARRSAQTALYHLVQAFVRWMSPILSFTAQ 784
Query: 1011 EVYSHLPSRQGTF 1023
E + +P + G +
Sbjct: 785 EAWPLIPEQTGKY 797
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 226/408 (55%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R + GK +++LHDGPPYANG H+GHAVNK+LKDI ++S ++ G YVPGWD
Sbjct: 46 IYQQIRASRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVMDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSLGAIAKAGHIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---KGA- 233
I L + A L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + V +G+
Sbjct: 224 TVIDLKDLSARLSIDVQDVTDI--VIWTTTPWTLPANQAVAVHADIDYQLVQVSTERGSQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + VV DF G ++ + HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAIERYKLENPVVLADFKGAVIEKLLLQHPLITD-RQVPVIVGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P A P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGVYLPTA-PIFAGEHIYKANPKIIEAL 399
Query: 353 VEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW + +HSYP+ WR K P+I +A+ QWFI D + ++ AL
Sbjct: 400 GAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQTAL 447
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW +HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTA-PIFAGEHIYKANPKIIEALGAVGRLWAHQPIKHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E + FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAKGLRQTALNAIENDIEFVPDWGKNRIQSMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT ++ I+ LI++ G D W++ + N +
Sbjct: 487 IPFFVHKDTNALHPRTPELIEEVAKLIEQEGIDGWYNRDASDFIGADAEQYNAVR 541
>gi|420222015|ref|ZP_14726940.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH08001]
gi|420224877|ref|ZP_14729715.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH06004]
gi|394290046|gb|EJE33916.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH08001]
gi|394294280|gb|EJE37966.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH06004]
Length = 916
Score = 353 bits (905), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ I HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFIEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 229/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P F LHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFTLHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ I HP R ++ V++ GTG VH
Sbjct: 269 EEVAEALGWD-KDSIQLEKEFTGKELEFIEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|325911859|ref|ZP_08174263.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
gi|325476365|gb|EGC79527.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
Length = 928
Score = 353 bits (905), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 EAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KVLTPILPHTMEEIWSYL 770
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 225/394 (57%), Gaps = 16/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VPGWD HG
Sbjct: 39 QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H Y TF
Sbjct: 99 LPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-PYITFQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++ KL
Sbjct: 158 QFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFKL-- 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
+ L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L+E +
Sbjct: 215 IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGLLEKVAQ 274
Query: 248 TFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQ 305
D VV F G ++ + HPI ++ L+ GF V+ GTGLVH AP G
Sbjct: 275 EIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHTAPGFGA 331
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +L + +
Sbjct: 332 DDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 390 THSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|85859341|ref|YP_461543.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85722432|gb|ABC77375.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 933
Score = 353 bits (905), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 333/637 (52%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+E+EY DH + SIY+K + + V L + +IWTTTPW++PAN
Sbjct: 192 TALAEAEVEY-ADHTTPSIYVKFAMISDISAVRPKL--SGQKVSIVIWTTTPWTIPANLA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTF---QTDIDVVCDFPGQYLQDITYIHPI 530
IA + Y +I+AK +++ F +++ +FPG L+ + HP+
Sbjct: 249 IALHEEFIYVAVRFDEEVLILAKDMLDYCIDAFGYQNKPYEILDEFPGAVLEGLKARHPL 308
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+ + L P FV+ GTG VH AP HGQ+D+ + + + + G+++PD
Sbjct: 309 IDRESVVILAP--FVTLDAGTGCVHIAPGHGQEDYEIGMKYGLDNYAPVDADGRFTPDVA 366
Query: 591 PGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
G + D D V ++ +L N +HSYP+ WR K P+I ++++QWFI E+
Sbjct: 367 -DFAG-EFVFDANDSVNRKLKEVGALLGLVNIEHSYPHCWRCKNPIIFRSTEQWFISMEK 424
Query: 649 --IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 704
++ +AL +E V ++P K + I RP WCISRQR+WGVPI +FY ++
Sbjct: 425 NELRKKALEAVESVRWIPAWGKDRIYGMIENRPDWCISRQRLWGVPITMFYCESCGAQVM 484
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISW 759
NE +KH L+ E G D W+ LL + V S K DILD+WFDSG+S
Sbjct: 485 NEEILKHLVGLVRESGADVWYEREAGALLPSGTVCPECHGSEFRKETDILDVWFDSGVSH 544
Query: 760 SHVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+ VL+ +P + +Y+EG DQ GWF SSLL SV ++ AP+RNV HGFVVD +G K
Sbjct: 545 AAVLEKRPNLNSPSDMYLEGSDQHRGWFHSSLLESVGTRNRAPYRNVLTHGFVVDGEGKK 604
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKSVGNVI + I + AYG ++LR WV A
Sbjct: 605 MSKSVGNVIESQQI-----------------------------IDAYGAEILRLWV---A 632
Query: 875 SKDPTVP--IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLK 928
S+D TV I IL + ++IR++ R++LG L++ + + S++ +D +ML
Sbjct: 633 SEDYTVDLRISDEILKRLVEAYRRIRNTSRFILGNLYDFNVESDSVAYADLEPMDRWMLH 692
Query: 929 RLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLH 988
RL E + T Y FQ+ L NF +LSA Y ++KDRLY + R S
Sbjct: 693 RLQELIRKVRTSYDNFQFHAVFSALYNFCTVDLSALYLDVLKDRLYTSRADSRERRSAQT 752
Query: 989 TLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSS 1025
+ I + + R +API+ AEE+++ LP+ +G +S
Sbjct: 753 VMFQIANDMTRLLAPILTFTAEEIWTALPAYEGKAAS 789
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 217/397 (54%), Gaps = 20/397 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y REA G+ +ILHDGPPYANG H+GHA+NKI+KDI ++S + G +VPGWD
Sbjct: 36 IYDRIREAARGRQSYILHDGPPYANGNIHLGHALNKIIKDIVIKSKSMTGCDCGFVPGWD 95
Query: 67 CHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIE K + K LS D R+ + +A + + Q+ +F+ GV +WE N Y
Sbjct: 96 CHGLPIEHQVDKELGEKKTELSQADKRRLCRVYADKYVGIQREQFKRLGVFGEWE-NPYL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T +Y + +F LY +Y+ KPVYW S +TALAE+E+EY DH + SIY+K
Sbjct: 155 TMHYDYEATTVEEFGKLYLGGAVYKGKKPVYWCASCKTALAEAEVEY-ADHTTPSIYVKF 213
Query: 184 KL----NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
+ + V L + +IWTTTPW++PAN IA + Y +I+AK
Sbjct: 214 AMISDISAVRPKL--SGQKVSIVIWTTTPWTIPANLAIALHEEFIYVAVRFDEEVLILAK 271
Query: 240 CLVESLKWTF---QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
+++ F E++ +FPG L+ + HP+ + + L P FV+ GTG
Sbjct: 272 DMLDYCIDAFGYQNKPYEILDEFPGAVLEGLKARHPLIDRESVVILAP--FVTLDAGTGC 329
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP- 355
VH AP HGQ+D+ + + + + G+++PD G + D D V ++
Sbjct: 330 VHIAPGHGQEDYEIGMKYGLDNYAPVDADGRFTPDVA-DFAG-EFVFDANDSVNRKLKEV 387
Query: 356 -DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
+L N +HSYP+ WR K P+I ++++QWFI E+
Sbjct: 388 GALLGLVNIEHSYPHCWRCKNPIIFRSTEQWFISMEK 424
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 1149 NYQHSYPYDWRTKKPVILKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIA 1206
N +HSYP+ WR K P+I ++++QWFI E+ ++ +AL +E V ++P K + I
Sbjct: 395 NIEHSYPHCWRCKNPIIFRSTEQWFISMEKNELRKKALEAVESVRWIPAWGKDRIYGMIE 454
Query: 1207 QRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
RP WCISRQR+WGVPI +FY ++NE +KH L+ E G D W+ LL
Sbjct: 455 NRPDWCISRQRLWGVPITMFYCESCGAQVMNEEILKHLVGLVRESGADVWYEREAGALLP 514
Query: 1265 TSDV 1268
+ V
Sbjct: 515 SGTV 518
>gi|300123089|emb|CBK24096.2| Isoleucyl-tRNA synthetase [Blastocystis hominis]
Length = 935
Score = 353 bits (905), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 238/701 (33%), Positives = 359/701 (51%), Gaps = 76/701 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG---ATDLHALIWTTTPWSLPANQFI 474
TALAE+ELEY DH S SIY+ L P L+ + L AL++TTTPW++P+N +
Sbjct: 210 TALAEAELEYH-DHKSPSIYVSFDLQSSPNPALQSFLSSHSLQALVFTTTPWTIPSNVCL 268
Query: 475 AFNPALEYSVASV-KGANVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINK 532
+ +P EY V + +V K VE L Q + +V + G LQ Y HP+
Sbjct: 269 SVSPESEYVVVQTPQNELFLVMKDRVEALSSLLQVPLSIVLSNLSGLSLQGSVYSHPLLH 328
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GP 591
++ V+S GTG+VH APAHG DDF + + + + + + G + +A
Sbjct: 329 TSH--TVIAGHHVTSDTGTGIVHTAPAHGLDDFNICVYHNV-IQEDVDDNGNFKANAWDD 385
Query: 592 GLEGLNILGDGKDQVLH-LVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
+ G ++L +G ++V+ L E + ++ H YPYDWR KKPVI + + QWFI T+ +
Sbjct: 386 RINGRSVLEEGSERVMEWLAESNHLVHRGEITHRYPYDWRAKKPVIFRVTPQWFIRTKHL 445
Query: 650 ---KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-----T 701
+P + +V +PES+++ L I+ RP WCISRQR WGVPIP + D T
Sbjct: 446 VQNQPILDSLKVKVQMIPESSRQRLTAMISDRPDWCISRQRAWGVPIPAVFRRDETGKET 505
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVE-------QLLNTSDVNSNVTKSNDILDIWFD 754
+++N+ NI + +++E G D+W+ +V+ ++ + +S D LD+W D
Sbjct: 506 VLMNKQNIDYIIKILEEKGTDYWFDSAVKDEEFVDPKIREADSKSVQYRRSQDTLDVWID 565
Query: 755 SGISWSH------------VLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVF 802
SG+SW H L+ P+ Y+EG DQ GWF SS+ TS + PFRN+
Sbjct: 566 SGVSWFHNYPNTIVDLFPQFLRLNPS--YLEGSDQHRGWFQSSIFTSQVHRGALPFRNLV 623
Query: 803 LHGFVVDEKGAKMSKSVGNVISAHDITQGA------KKLPA--------YEKSVGNVISA 848
HGF+VDEKG KMSKS+GN+I+ + A K+ PA +K+ N
Sbjct: 624 THGFLVDEKGQKMSKSLGNLITPSQLLGSAESPANSKRTPANSKGTQSNSKKTPSNSTET 683
Query: 849 HDITQG----AKKLPA------YGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQK 896
+G +KK+P + VDVLR WV AS D T + +G L Q+ QK
Sbjct: 684 QSALRGTQSNSKKVPTSLLDRQWAVDVLRLWV---ASSDYTYDISLGLQQLLKVQESYQK 740
Query: 897 IRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRV 952
+R++ RYLL L + + S+ D + L RL + Y F + R
Sbjct: 741 LRNTNRYLLSNLFDFDRTRDSVPYDQMSLFDKWCLSRLFSLSTKITQAYDHFVFTDVYRS 800
Query: 953 LLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV 1012
L++F ++LSA YF ++KDRLY D+ N R + L I VL + +API P L+EE+
Sbjct: 801 LVSFAASDLSATYFDIIKDRLYTDAPNSIRRRASQTVLRTILDVLPQLMAPITPFLSEEI 860
Query: 1013 YSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYC-DSINGE 1052
YS L +G+ + K+ ++ + C +SI GE
Sbjct: 861 YSAL-KEEGSIFQNTYVKLNPEWKNEEVETAWNCVESIRGE 900
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 223/400 (55%), Gaps = 23/400 (5%)
Query: 6 ELYSWQREALNGKP--EFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
+LY+WQ++A +G ++I HDGPPYANG H+GH NKILKDI R LL G V Y P
Sbjct: 56 DLYNWQKQARSGSQYRKWITHDGPPYANGDLHMGHFENKILKDIINRHKLLTGCCVEYKP 115
Query: 64 GWDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
GWDCHGLPIELKA+ S +K L IR + FA +TI QK WG++
Sbjct: 116 GWDCHGLPIELKALQSMCKNEKQTDSLKIRSLCRKFASDTIKRQKKSINEWGIITSI--- 172
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
++ L F ++ ++ IYR LKPVYWSP S TALAE+ELEY DH S SIY
Sbjct: 173 ---LIVTILLQRNLELFSDMVAKNCIYRGLKPVYWSPHSHTALAEAELEYH-DHKSPSIY 228
Query: 181 LKIKLNQVPAHLLE---GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV-KGANVI 236
+ L P L+ + L AL++TTTPW++P+N ++ +P EY V + +
Sbjct: 229 VSFDLQSSPNPALQSFLSSHSLQALVFTTTPWTIPSNVCLSVSPESEYVVVQTPQNELFL 288
Query: 237 VAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
V K VE+L Q + +V + G LQ Y HP+ ++ V+S GTG
Sbjct: 289 VMKDRVEALSSLLQVPLSIVLSNLSGLSLQGSVYSHPLLHTSH--TVIAGHHVTSDTGTG 346
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLH-LV 353
+VH APAHG DDF + + + + + + G + +A + G ++L +G ++V+ L
Sbjct: 347 IVHTAPAHGLDDFNICVYHNV-IQEDVDDNGNFKANAWDDRINGRSVLEEGSERVMEWLA 405
Query: 354 EPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 392
E + ++ H YPYDWR KKPVI + + QWFI T+ +
Sbjct: 406 ESNHLVHRGEITHRYPYDWRAKKPVIFRVTPQWFIRTKHL 445
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 99/172 (57%), Gaps = 13/172 (7%)
Query: 1102 VYHHL--NLITNQGKYSPDA-GPGLEGLNILGEGKDQVLH-LVEPD-VLWTENYQHSYPY 1156
VYH++ + + G + +A + G ++L EG ++V+ L E + ++ H YPY
Sbjct: 363 VYHNVIQEDVDDNGNFKANAWDDRINGRSVLEEGSERVMEWLAESNHLVHRGEITHRYPY 422
Query: 1157 DWRTKKPVILKASQQWFIDTERI---KPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
DWR KKPVI + + QWFI T+ + +P + V +PES+++ L I+ RP WCI
Sbjct: 423 DWRAKKPVIFRVTPQWFIRTKHLVQNQPILDSLKVKVQMIPESSRQRLTAMISDRPDWCI 482
Query: 1214 SRQRVWGVPIPVFYDGD-----TIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
SRQR WGVPIP + D T+++N+ NI + +++E G D+W+ V+
Sbjct: 483 SRQRAWGVPIPAVFRRDETGKETVLMNKQNIDYIIKILEEKGTDYWFDSAVK 534
>gi|75391303|sp|Q846V6.1|SYI_STAEP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|29123080|gb|AAO65848.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis]
Length = 871
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF ++K +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVKQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKKTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 228/393 (58%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPYITLTPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALSEEVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ +PV++ + ++G ++ + GP EG+ K L E D L ++
Sbjct: 333 DDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF ++K + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVKQDIL 424
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++K + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVKQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|403234872|ref|ZP_10913458.1| isoleucyl-tRNA ligase [Bacillus sp. 10403023]
Length = 922
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 228/622 (36%), Positives = 331/622 (53%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + +LEG D +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYQ-DKRSASIYVAFPVKDGKG-VLEG--DEKIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P LEYSV V ++A L+ + + W D+ +V F G+ L+++ HPI
Sbjct: 248 PDLEYSVVKVDDTKYVLASALLEAAAKEIGWE---DVTIVKTFKGRELENVVAAHPIYG- 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD ++ V++ GTG VH AP HG+DDF++ I VL + +G + +A G
Sbjct: 304 -RDSLVMLGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGIGVLCPVDEKGYMTAEA-EGF 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L ++ HSYP+DWRTKKP I +A+ QWF + + E
Sbjct: 362 EGLFYDEANKPITEKLNEVGALLKLSFITHSYPHDWRTKKPTIFRATAQWFASIKDFRNE 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
+ ++E +VP + L + + R WCISRQR WGVPIPVFY +G+ II +E I
Sbjct: 422 LMEAVKETKWVPAWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDET-IN 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L E+G + W+ + LL + S N TK DI+D+WFDSG S VL +
Sbjct: 481 HVSDLFREYGSNVWFEREAKDLLPEGFTHESSPNGIFTKETDIMDVWFDSGSSHQAVLLE 540
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+G
Sbjct: 541 RDDLQRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIG 600
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV+ +PA K + G D+LR WVA+ V
Sbjct: 601 NVV-----------VPA------------------KVMKQLGADILRLWVAS-VDYQSDV 630
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ IL + +KIR++ R+LLG L++ + T ++ R VD Y+L +L + +
Sbjct: 631 RVSDAILKQVAEVYRKIRNTFRFLLGNLNDFNPETDAVPVNELREVDRYILVKLNKLIDK 690
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ T Y +++A + NF ELS+FY KD LY ++ N R S L+
Sbjct: 691 VKTSYENYEFAGVYHSVHNFCTIELSSFYLDFAKDILYIEAENQHDRRSIQTVLYEALLS 750
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
L + V PI+PH A+EV+SH+ S
Sbjct: 751 LTKLVTPILPHTADEVWSHIDS 772
Score = 279 bits (714), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 227/396 (57%), Gaps = 13/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NKI+KD+ +R + G YVPGWD
Sbjct: 36 IYQKVQERTKGRPLFVLHDGPPYANGDIHMGHALNKIIKDMIVRFKSMNGFCAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +K K +S + RK + +A E IN Q+ +F+ GV DWE N Y
Sbjct: 96 THGLPIETALTKNKKVNRKAMSVAEFRKLCEEYAYEQINNQREQFKRLGVRGDWE-NPYI 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 155 TLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSASIYVAF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VIVAKCLV 242
+ +LEG D +IWTTTPW++PAN I+ +P LEYSV V V+ + L
Sbjct: 214 PVKDGKG-VLEG--DEKIIIWTTTPWTIPANLGISVHPDLEYSVVKVDDTKYVLASALLE 270
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ K D+ +V F G+ L+++ HPI RD ++ V++ GTG VH AP
Sbjct: 271 AAAKEIGWEDVTIVKTFKGRELENVVAAHPIYG--RDSLVMLGEHVTTDAGTGCVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF++ I VL + +G + +A G EGL K L E L +
Sbjct: 329 HGEDDFIVGQKYGIGVLCPVDEKGYMTAEA-EGFEGLFYDEANKPITEKLNEVGALLKLS 387
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKP I +A+ QWF + + E +
Sbjct: 388 FITHSYPHDWRTKKPTIFRATAQWFASIKDFRNELM 423
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 1111 NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKAS 1169
++ Y G EGL K L E L ++ HSYP+DWRTKKP I +A+
Sbjct: 349 DEKGYMTAEAEGFEGLFYDEANKPITEKLNEVGALLKLSFITHSYPHDWRTKKPTIFRAT 408
Query: 1170 QQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY-- 1227
QWF + + E + ++ +VP + L + + R WCISRQR WGVPIPVFY
Sbjct: 409 AQWFASIKDFRNELMEAVKETKWVPAWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYGE 468
Query: 1228 DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L E+G + W+ + LL
Sbjct: 469 NGEPIITDET-INHVSDLFREYGSNVWFEREAKDLL 503
>gi|340758052|ref|ZP_08694644.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
gi|251836342|gb|EES64879.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
Length = 933
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/623 (33%), Positives = 327/623 (52%), Gaps = 56/623 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EYK + S SIY+++K N L + +IWTTTPW+LPAN I+ N
Sbjct: 193 TALAEAEIEYK-NVSSPSIYVRMKANADLLERLGLTEEAWVVIWTTTPWTLPANVAISLN 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P EY V + N+I+ K L E + +++ +F G+ L+ TY HP +R
Sbjct: 252 PDFEYGVYKTEKGNLILGKDLAEKAFTEMDLEQFELIKEFQGKDLERATYQHPF--LERT 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ + +PV++ I N+G + +AG GL
Sbjct: 310 GMIILGTHVTADAGTGCVHTAPGHGQDDYVVGVRYGLPVISPINNKGVLTEEAGE-FAGL 368
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
+ K HL + ++ + +HSYP+DWR+K PVI +A++QWF++ E I+ +A
Sbjct: 369 FYVQANKAICAHLEKTGHLMKLKMIEHSYPHDWRSKTPVIFRATEQWFVNVEGSDIREKA 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKH 711
L L+ V F+P + + + RP WCISRQRVWGVPIPVF++ I N+ +
Sbjct: 429 LKALDNVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFFNEANGKEIFNKEILAR 488
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVLKD 765
++ + G W S E+L+ + + K +I+D+WFDSG+S VL+
Sbjct: 489 IVEIVKKEGTAAWLKYSAEELIGDELMEKYGLKGLELRKETNIMDVWFDSGVSHRAVLET 548
Query: 766 K------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF +SLLTS+ H APF+ + HGFV D +G KMSKSV
Sbjct: 549 RGDLLHRPADMYLEGSDQHRGWFQTSLLTSIGSTHDAPFKKILTHGFVNDGEGKKMSKSV 608
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN + D+ + YG D+LR W A+ ++
Sbjct: 609 GNTVVPADV-----------------------------IKLYGADILRLWCASVDYRE-D 638
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V I NIL + +++R++ RY+LG ++ +T + +D + L +L +
Sbjct: 639 VKISDNILKQMAEAYRRVRNTARYILGNSNDFDPNTDKVPYDKLMEIDKWALNKLEILKR 698
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +++ + + F ++SAFY ++KDRLY + N R + + I
Sbjct: 699 KVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDIIKDRLYTEGTNSIERRAAQTVMTEILV 758
Query: 996 VLLRTVAPIMPHLAEEVYSHLPS 1018
L + +API+ +EE++ LP
Sbjct: 759 TLTKMIAPILSFTSEEIWETLPE 781
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/419 (41%), Positives = 243/419 (57%), Gaps = 15/419 (3%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G FILHDGPPYANG HIGHA+NKILKDI L+ L+G +V YVPGWD HGLPIELK
Sbjct: 47 GTKTFILHDGPPYANGEIHIGHALNKILKDIILKYKRLRGYKVPYVPGWDTHGLPIELKV 106
Query: 77 ---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+ SK K +S +IR+ +A + + QK F G+L DWE N Y T + EY Q
Sbjct: 107 TEKLGSKAKEMSAAEIRELCAEYAKKWVGIQKEGFVRLGILGDWE-NPYLTLNPEYEAKQ 165
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
L F LY+ YI++ LKP+YWSP + TALAE+E+EYK + S SIY+++K N L
Sbjct: 166 LEVFGELYENGYIFKGLKPIYWSPVTETALAEAEIEYK-NVSSPSIYVRMKANADLLERL 224
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD- 252
+ +IWTTTPW+LPAN I+ NP EY V + N+I+ K L E +
Sbjct: 225 GLTEEAWVVIWTTTPWTLPANVAISLNPDFEYGVYKTEKGNLILGKDLAEKAFTEMDLEQ 284
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
E++ +F G+ L+ TY HP +R ++ V++ GTG VH AP HGQDD+++ +
Sbjct: 285 FELIKEFQGKDLERATYQHPF--LERTGMIILGTHVTADAGTGCVHTAPGHGQDDYVVGV 342
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDW 371
+PV++ I N+G + +AG GL + K HL + ++ + +HSYP+DW
Sbjct: 343 RYGLPVISPINNKGVLTEEAGE-FAGLFYVQANKAICAHLEKTGHLMKLKMIEHSYPHDW 401
Query: 372 RTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRPGTALAESELEYKPD 430
R+K PVI +A++QWF++ E K + N+ +R G S LE +PD
Sbjct: 402 RSKTPVIFRATEQWFVNVEGSDIREKALKALDNVEFIPAWGRNRIG-----SMLETRPD 455
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 6/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I N+G + +AG GL + K HL + ++ + +HSYP+DWR+K PVI +
Sbjct: 352 INNKGVLTEEAGE-FAGLFYVQANKAICAHLEKTGHLMKLKMIEHSYPHDWRSKTPVIFR 410
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF++ E I+ +AL L+ V F+P + + + RP WCISRQRVWGVPIPV
Sbjct: 411 ATEQWFVNVEGSDIREKALKALDNVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPV 470
Query: 1226 FYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F++ I N+ + ++ + G W E+L+
Sbjct: 471 FFNEANGKEIFNKEILARIVEIVKKEGTAAWLKYSAEELI 510
>gi|418613025|ref|ZP_13176046.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU117]
gi|374817335|gb|EHR81520.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU117]
Length = 916
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGF +D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFFMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 228/393 (58%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPYITLTPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALSEEVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ +PV++ + ++G ++ + GP EG+ K L E D L ++
Sbjct: 333 DDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|417660093|ref|ZP_12309684.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU045]
gi|417909952|ref|ZP_12553685.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU037]
gi|417910778|ref|ZP_12554494.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU105]
gi|418603426|ref|ZP_13166811.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU041]
gi|418622110|ref|ZP_13184866.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU123]
gi|418629039|ref|ZP_13191555.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU127]
gi|420182863|ref|ZP_14688996.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM049]
gi|420187601|ref|ZP_14693621.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM039]
gi|420194069|ref|ZP_14699898.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM021]
gi|420197085|ref|ZP_14702809.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM020]
gi|420226984|ref|ZP_14731757.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05003]
gi|420229306|ref|ZP_14734012.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH04003]
gi|329734417|gb|EGG70730.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU045]
gi|341652561|gb|EGS76349.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU037]
gi|341654966|gb|EGS78702.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU105]
gi|374407595|gb|EHQ78448.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU041]
gi|374827485|gb|EHR91347.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU123]
gi|374835033|gb|EHR98664.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU127]
gi|394249326|gb|EJD94539.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM049]
gi|394256043|gb|EJE00979.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM039]
gi|394265892|gb|EJE10538.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM020]
gi|394266767|gb|EJE11392.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM021]
gi|394297485|gb|EJE41082.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05003]
gi|394299072|gb|EJE42623.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH04003]
Length = 916
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ I HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFIEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 230/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ I HP R ++ V++ GTG VH
Sbjct: 269 EEVAEALGWD-KDSIQLEKEFTGKELEFIEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|288553142|ref|YP_003425077.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
gi|288544302|gb|ADC48185.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
Length = 921
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 216/619 (34%), Positives = 320/619 (51%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + L A D +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYH-DKRSPSIYVAFNIKDGKNVL---AGDEKIIIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y+V V +VA L+E L+ F+ ++V GQ L+ + HP+ RD
Sbjct: 248 PELDYNVVKVNDEKYVVAAGLLEKLQAEFEWEQVEVEKTVKGQELEHVVATHPLYG--RD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG++D+L+ + VL + ++G + +A PG EG+
Sbjct: 306 SLVMCGDHVTLDAGTGCVHTAPGHGEEDYLVGQKYGLDVLCPVDDKGNMTEEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSY +DWRTKKPVI +A+ QWF + E L
Sbjct: 365 FYDQANKPITEKLDEVGALMKLTFITHSYAHDWRTKKPVIYRATAQWFASIADFRDELLQ 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ +V ++P + L + + R WCISRQR WGVPIPVFY +G+ II +E I H
Sbjct: 425 AINDVEWIPSWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYGENGEPIITDET-IDHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ ++LL + N T+ DI+D+WFDSG S VL+++
Sbjct: 484 ALFREHGSNIWFEWDTKELLPEGFTSEHSPNGEFTREMDIMDVWFDSGSSHQAVLEERAE 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL TSVA+ AP++ V HGF +D +G KMSKSVGNV+
Sbjct: 544 LARPADLYLEGSDQYRGWFNSSLSTSVAVTGKAPYKGVLSHGFALDGQGRKMSKSVGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+D+ + G D+LR WVA+ V +
Sbjct: 604 VPNDV-----------------------------MKQLGADILRLWVAS-VDYQSDVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG LH+ + + V ++ML +L E +
Sbjct: 634 DKILKQVSESYRKIRNTFRFLLGNLHDFDPAVNRVKNEDLDGVHLFMLVKLNEVIEKVKD 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++Q++ + NF ELS+FY L KD LY + + R ++ L +
Sbjct: 694 AYDQYQFSTVYHTIHNFCTIELSSFYMDLAKDTLYIEHADHAERRKIQTVMYESVLTLTK 753
Query: 1000 TVAPIMPHLAEEVYSHLPS 1018
V+PI+ H A+EV+ +P+
Sbjct: 754 LVSPILSHTADEVWEEIPA 772
Score = 259 bits (662), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 224/398 (56%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y ++ G+P F+LHDGPPYANG H+GHA+NK+LKD +R + G YVPGW
Sbjct: 35 DIYQAVQKRTEGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVRYKSMNGFHAPYVPGW 94
Query: 66 DCHGLPIELKAITS----KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
D HGLPIE A+T K K ++ RK + +A E ++ Q +F GV DW N
Sbjct: 95 DTHGLPIE-TALTKNGKVKRKEMTVAAFRKLCEEYAREQVSRQCEQFMRLGVRGDW-WNP 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T DKEY Q+ F ++ K+ YIY+ KPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 153 YVTLDKEYEAQQIKVFGDMAKKGYIYKGKKPVYWSPSSESALAEAEIEYH-DKRSPSIYV 211
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ L A D +IWTTTPW++PAN I+ +P L+Y+V V +VA L
Sbjct: 212 AFNIKDGKNVL---AGDEKIIIWTTTPWTIPANLGISVHPELDYNVVKVNDEKYVVAAGL 268
Query: 242 VESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+E L+ F+ +EV GQ L+ + HP+ RD ++ V+ GTG VH A
Sbjct: 269 LEKLQAEFEWEQVEVEKTVKGQELEHVVATHPLYG--RDSLVMCGDHVTLDAGTGCVHTA 326
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG++D+L+ + VL + ++G + +A PG EG+ K L E L
Sbjct: 327 PGHGEEDYLVGQKYGLDVLCPVDDKGNMTEEA-PGFEGMFYDQANKPITEKLDEVGALMK 385
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSY +DWRTKKPVI +A+ QWF + E L
Sbjct: 386 LTFITHSYAHDWRTKKPVIYRATAQWFASIADFRDELL 423
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EG+ K L E L + HSY +DWRTKKPVI +
Sbjct: 348 VDDKGNMTEEA-PGFEGMFYDQANKPITEKLDEVGALMKLTFITHSYAHDWRTKKPVIYR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + E L + V ++P + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIADFRDELLQAINDVEWIPSWGETRLYNMVRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ ++LL
Sbjct: 467 GENGEPIITDE-TIDHVSALFREHGSNIWFEWDTKELL 503
>gi|407007872|gb|EKE23408.1| hypothetical protein ACD_6C00485G0002 [uncultured bacterium]
Length = 948
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 228/675 (33%), Positives = 350/675 (51%), Gaps = 81/675 (12%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + +++G I + G H PG ++LAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSLGAI-AKAG--HIEPGLKPVNWCLDCGSSLAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL-LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--- 490
+ + L + A + +E A +IWTTTPW++PANQ +A + LEY + G
Sbjct: 221 VGFTVVDLADLSARVGVEIADRTDIVIWTTTPWTMPANQAVALHAELEYQLVKAIGEDKA 280
Query: 491 --NVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSS 547
N I+AK LVE+ + T +V+ +F G L+++ HP+ E R + ++ V+
Sbjct: 281 SQNFILAKSLVESATQRYGFTAFEVLAEFTGAKLENLVLQHPLIAE-RQVPVILGEHVTD 339
Query: 548 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL 607
+ GTG VH AP HG DD+ + L + V N + G Y P + P G +I +
Sbjct: 340 ASGTGAVHTAPGHGVDDYKVGLQYNLKVENPVGGNGVYLPTS-PIFPGEHIYKANPKIIA 398
Query: 608 HLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNFV 663
L E LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL +E +++FV
Sbjct: 399 ALTEATKLWAHVVIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQNALNAIENDISFV 458
Query: 664 PESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN------IKHFCTLID 717
P+ K ++ I RP WCISRQR WGVPIP F DT NE + I+ LI+
Sbjct: 459 PDWGKNRIQAMIEGRPDWCISRQRTWGVPIPFFVHKDT---NELHPRTPELIEEVAKLIE 515
Query: 718 EHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYM 772
+ G D W++ + + N + D LD+WFDSG + VL+++ PA +Y+
Sbjct: 516 QEGIDGWYNRDASEFIGADAEQYNAVR--DTLDVWFDSGTTHYAVLREREELTDPADLYL 573
Query: 773 EGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGA 832
EG DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GNV
Sbjct: 574 EGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSIGNV---------- 623
Query: 833 KKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQD 892
I+ DI + G D LR+W+A+ A + GK I + + D
Sbjct: 624 -------------ITPQDIIKD------MGADGLRFWIAS-ADYRYEMTAGKEIFSRASD 663
Query: 893 DVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYAR 948
++IR++LR+LL L+ ST ++ +D Y+L+R E Q T+ Y + +
Sbjct: 664 GYRRIRNTLRFLLANLNGFKPSTDALPVDQLIALDQYILQRASEVQETIKKAYEDMNFHI 723
Query: 949 ASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHL 1008
+ L NF +N+L FY ++KDR Y + +AR S L+++ +R ++PI+
Sbjct: 724 VTTALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSAQTALYHLVQAFVRWMSPILSFT 783
Query: 1009 AEEVYSHLPSRQGTF 1023
A+E + +P + +
Sbjct: 784 AQEAWPLIPEQSEKY 798
Score = 251 bits (640), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/407 (37%), Positives = 223/407 (54%), Gaps = 20/407 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y RE+ GK +++LHDGPPYANG H+GHAVNK+LKDI ++S ++ G YVPGWD
Sbjct: 46 IYQQIRESRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVMDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W ++LAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSLGAIAKAGHIEPGLKPVNWCLDCGSSLAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL-LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA-----N 234
+ L + A + +E A +IWTTTPW++PANQ +A + LEY + G N
Sbjct: 224 TVVDLADLSARVGVEIADRTDIVIWTTTPWTMPANQAVALHAELEYQLVKAIGEDKASQN 283
Query: 235 VIVAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
I+AK LVES + T EV+ +F G L+++ HP+ E R + ++ V+ + G
Sbjct: 284 FILAKSLVESATQRYGFTAFEVLAEFTGAKLENLVLQHPLIAE-RQVPVILGEHVTDASG 342
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TG VH AP HG DD+ + L + V N + G Y P + P G +I + L
Sbjct: 343 TGAVHTAPGHGVDDYKVGLQYNLKVENPVGGNGVYLPTS-PIFPGEHIYKANPKIIAALT 401
Query: 354 EPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
E LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL
Sbjct: 402 EATKLWAHVVIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQNAL 448
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVI 1165
N + G Y P + P G +I + L E LW +HSYP+ WR K P+I
Sbjct: 369 NPVGGNGVYLPTS-PIFPGEHIYKANPKIIAALTEATKLWAHVVIKHSYPHCWRHKTPII 427
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E ++FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 428 FRATPQWFISMDAKGLRQNALNAIENDISFVPDWGKNRIQAMIEGRPDWCISRQRTWGVP 487
Query: 1223 IPVFYDGDTIIVNEAN------IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT NE + I+ LI++ G D W++ + + N +
Sbjct: 488 IPFFVHKDT---NELHPRTPELIEEVAKLIEQEGIDGWYNRDASEFIGADAEQYNAVR 542
>gi|374709387|ref|ZP_09713821.1| isoleucyl-tRNA synthetase [Sporolactobacillus inulinus CASD]
Length = 923
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 224/622 (36%), Positives = 323/622 (51%), Gaps = 63/622 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT----DLHALIWTTTPWSLPANQF 473
+ALAE+E+EYK D S SIY V H+ +G D +IWTTTPW++PAN
Sbjct: 191 SALAEAEIEYK-DVKSYSIY-------VAFHVTDGKGVLNHDEEVIIWTTTPWTMPANLA 242
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
IA NP EYSV V+ +VA LVE L TF+ + V+ G+ L+ + HP
Sbjct: 243 IAVNPKFEYSVVQVEDRKFVVASELVEKLTKTFEWNEPKVLRTVNGKELEHVVCRHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R ++ V+ GTG VH AP G DDF + + +L + + G + D PG
Sbjct: 302 -DRPSLMILGDHVTLDAGTGCVHTAPGFGADDFYIGKKYGLDILCPVDDHGCMT-DEAPG 359
Query: 593 LEGLNILGDGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ + + L E L + HSYP+DWRTKKPVI +A++QWF + +
Sbjct: 360 FEGVFYEKANEPVIEKLKEVGALLKVGTFTHSYPHDWRTKKPVIWRATEQWFASIKAFRD 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
+ L+ + EV+++P + + I R WCISRQR WGVPIPVFY DG+ II ++ I
Sbjct: 420 DILSAIHEVHWIPSWGDVRMTNMIKDREDWCISRQRAWGVPIPVFYGEDGEAIITDQ-TI 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLN---TSDVNSNVT--KSNDILDIWFDSGISWSHVLK 764
+H L EHG + W+ V+ LL TS+ + N T K DI+D+WFDSG S VL
Sbjct: 479 QHVAELFREHGSNVWFKWDVKDLLPEGFTSEHSPNGTFKKETDIMDVWFDSGSSHQGVLT 538
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF SSL TSVA+ AP++ + HGF +D KG KMSKSV
Sbjct: 539 TREGLRRPADLYLEGSDQYRGWFNSSLATSVAVTGHAPYKQILSHGFTLDGKGLKMSKSV 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + Q YG D++R WVA+
Sbjct: 599 GNVIDPMKVMQ-----------------------------QYGADIIRLWVAS-VDYQAD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR---YVDVYMLKRLCEFQNT 936
+ IL + +KIR+++R++LG L++ + ++ ++ YML +L F +T
Sbjct: 629 ARVSNEILGQVAEVYRKIRNTVRFMLGNLNDFTVDKIVPTQDMPELEQYMLVKLNHFIDT 688
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y +Q+ + L N+ +LSAFY + KD LY N R S L+
Sbjct: 689 CLNNYSAYQFLNVYKALQNYCSLDLSAFYMDIAKDALYVQPKNSLVRRSAQTVLYKTVVA 748
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
+ + ++PI+PH AEE++ ++P
Sbjct: 749 MTKILSPIIPHTAEEIWQNIPG 770
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 222/399 (55%), Gaps = 20/399 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y + GKP FILHDGPPYANG HIGHA NK+LKDI R + G + +YVPGWD
Sbjct: 36 IYEQSLKVNEGKPTFILHDGPPYANGNIHIGHAENKVLKDIINRFKSMSGYQTYYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K +S D+R+K K +AL + QK +F+ GV DWEH Y T
Sbjct: 96 THGLPIEQQLAKKGIDRKKMSVADLREKCKEYALGQVEQQKKQFKRLGVRGDWEHP-YLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
K + Q+ F + K+ YIY+D K VYWSPSS +ALAE+E+EYK D S SIY
Sbjct: 155 LHKAFEAEQIKVFGEMAKKGYIYKDKKTVYWSPSSESALAEAEIEYK-DVKSYSIY---- 209
Query: 185 LNQVPAHLLEGAT----DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
V H+ +G D +IWTTTPW++PAN IA NP EYSV V+ +VA
Sbjct: 210 ---VAFHVTDGKGVLNHDEEVIIWTTTPWTMPANLAIAVNPKFEYSVVQVEDRKFVVASE 266
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
LVE L TF+ + +V+ G+ L+ + HP R ++ V+ GTG VH
Sbjct: 267 LVEKLTKTFEWNEPKVLRTVNGKELEHVVCRHPFY--DRPSLMILGDHVTLDAGTGCVHT 324
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G DDF + + +L + + G + D PG EG+ + + L E L
Sbjct: 325 APGFGADDFYIGKKYGLDILCPVDDHGCMT-DEAPGFEGVFYEKANEPVIEKLKEVGALL 383
Query: 360 -TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A++QWF + + + L
Sbjct: 384 KVGTFTHSYPHDWRTKKPVIWRATEQWFASIKAFRDDIL 422
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDT 1176
D PG EG+ + + L E L + HSYP+DWRTKKPVI +A++QWF
Sbjct: 355 DEAPGFEGVFYEKANEPVIEKLKEVGALLKVGTFTHSYPHDWRTKKPVIWRATEQWFASI 414
Query: 1177 ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIV 1234
+ + + L+ + V+++P + + I R WCISRQR WGVPIPVFY DG+ II
Sbjct: 415 KAFRDDILSAIHEVHWIPSWGDVRMTNMIKDREDWCISRQRAWGVPIPVFYGEDGEAIIT 474
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
++ I+H L EHG + W+ V+ LL
Sbjct: 475 DQ-TIQHVAELFREHGSNVWFKWDVKDLL 502
>gi|4836216|gb|AAD30388.1|AF096862_2 isoleucyl-tRNA synthase [Fervidobacterium pennivorans DSM 9078]
Length = 897
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 220/620 (35%), Positives = 326/620 (52%), Gaps = 65/620 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY+K ++ P D + +IWTTTPW++PAN IA +
Sbjct: 177 TALAEAEIEYH-DHESPSIYVKFQMVDKP--------DTYIVIWTTTPWTIPANVAIALH 227
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P Y V IVA+ L++ D +VV F G+ L+ HP+ R
Sbjct: 228 PDYTYVKIKVDEEYWIVAEGLLQKFAADVGIDFEVVEKFVGKELEGKLTKHPLY--DRTS 285
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ A +V+ GTG VH AP HG++D+ L +PVL+ + ++G+++ +AG EGL
Sbjct: 286 VVVLADYVTLEDGTGCVHTAPGHGEEDYQTGLKYNLPVLSPVDDEGRFTKEAGK-YEGLK 344
Query: 598 ILGDGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 654
I K V L ++ HSYP+ WR K PV+ +A+ QWFI D ++ + L
Sbjct: 345 IWDANKVIVEDLKNNGSLIKAGKISHSYPHCWRCKGPVMFRATPQWFISVDKNNLRGKVL 404
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+++V + P + + + +RP W ISRQRVWGVPIP D + + I+HF
Sbjct: 405 EEIKKVKWYPAWGETRITAMVQERPDWTISRQRVWGVPIPAVKCKDCGEVTLEPKVIEHF 464
Query: 713 CTLIDEHGPDFWWSLSVEQLLNT-----SDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
++ E G D W+ L V +L+ + + N K++D LD+W DSG SW V++ K
Sbjct: 465 ANIVKEKGTDAWFELDVNELIPADFKCPACGSKNFEKTHDTLDVWMDSGCSWEAVIRSKG 524
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
P +Y+EG DQ GWF SS+ S A TAPF+ V HGF+ DE+G KMSKS+GNVI
Sbjct: 525 ERFPVDLYLEGDDQHRGWFQSSIFLSTAKAGTAPFKAVVTHGFIKDEQGRKMSKSLGNVI 584
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+I YG D+LR WVA+ D + +G
Sbjct: 585 DPMEIVN-----------------------------KYGADILRLWVASTDFFD-NIRVG 614
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY-----VDVYMLKRLCEFQNTMD 938
KNI+ + +K+R++LRYLL L++ +E+ + Y +D + L RL +F +
Sbjct: 615 KNIIEQQVEVYRKLRNTLRYLLSNLYDFTEA--DLLPYEKLLPLDKWALGRLQKFIEQIT 672
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+Y++ + + ELSA Y ++KDRLY ++ + R S LH I L+
Sbjct: 673 QYYEGFEYSKVYNATVKYCTTELSAVYLDILKDRLYVEAKDSIYRRSAQTALHYILEALI 732
Query: 999 RTVAPIMPHLAEEVY--SHL 1016
+ +API+P AEE Y SHL
Sbjct: 733 KILAPIIPFTAEEAYQESHL 752
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 222/391 (56%), Gaps = 17/391 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
E+Y E P ++LHDGPPYANG H+G A+NKILKD R ++G RV +VPG
Sbjct: 19 KEIYKKTLETRANAPTYLLHDGPPYANGDIHLGTAMNKILKDFVTRYKTMRGYRVPFVPG 78
Query: 65 WDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE + TS + K SP +IRK K FAL+ ++ Q+ EF+ GV DWEH
Sbjct: 79 WDTHGLPIEHRVTTSLGEEAKKKSPAEIRKLCKEFALKYVDIQREEFKRLGVKGDWEHP- 137
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D +Y + L F L + +YR KPVYW P+ RTALAE+E+EY DH S SIY+
Sbjct: 138 YITLDPDYEYHILDVFKTLVENGNVYRGNKPVYWCPTCRTALAEAEIEYH-DHESPSIYV 196
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
K ++ P D + +IWTTTPW++PAN IA +P Y V IVA+ L
Sbjct: 197 KFQMVDKP--------DTYIVIWTTTPWTIPANVAIALHPDYTYVKIKVDEEYWIVAEGL 248
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
++ D EVV F G+ L+ HP+ R ++ A +V+ GTG VH AP
Sbjct: 249 LQKFAADVGIDFEVVEKFVGKELEGKLTKHPLY--DRTSVVVLADYVTLEDGTGCVHTAP 306
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV-EPDVLWT 360
HG++D+ L +PVL+ + ++G+++ +AG EGL I K V L ++
Sbjct: 307 GHGEEDYQTGLKYNLPVLSPVDDEGRFTKEAGK-YEGLKIWDANKVIVEDLKNNGSLIKA 365
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
HSYP+ WR K PV+ +A+ QWFI ++
Sbjct: 366 GKISHSYPHCWRCKGPVMFRATPQWFISVDK 396
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPV 1164
L+ + ++G+++ +AG EGL I K V L ++ HSYP+ WR K PV
Sbjct: 324 LSPVDDEGRFTKEAGK-YEGLKIWDANKVIVEDLKNNGSLIKAGKISHSYPHCWRCKGPV 382
Query: 1165 ILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+ +A+ QWFI D ++ + L ++ V + P + + + +RP W ISRQRVWGVP
Sbjct: 383 MFRATPQWFISVDKNNLRGKVLEEIKKVKWYPAWGETRITAMVQERPDWTISRQRVWGVP 442
Query: 1223 IPVF--YDGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IP D + + I+HF ++ E G D W+ L V +L+
Sbjct: 443 IPAVKCKDCGEVTLEPKVIEHFANIVKEKGTDAWFELDVNELI 485
>gi|309809437|ref|ZP_07703295.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
gi|308170109|gb|EFO72144.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
Length = 928
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 DAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 225/394 (57%), Gaps = 16/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VPGWD HG
Sbjct: 39 QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H Y TF
Sbjct: 99 LPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-PYITFQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++ KL
Sbjct: 158 QFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFKL-- 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
+ L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L+E +
Sbjct: 215 IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGLLEKVAQ 274
Query: 248 TFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQ 305
D VV F G ++ + HPI ++ L+ GF V+ GTGLVH AP G
Sbjct: 275 EIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHTAPGFGA 331
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +L + +
Sbjct: 332 DDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 390 THSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|309805561|ref|ZP_07699606.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
gi|308165212|gb|EFO67450.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
Length = 928
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 EAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 225/394 (57%), Gaps = 16/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VPGWD HG
Sbjct: 39 QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H Y TF
Sbjct: 99 LPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-PYITFQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++ KL
Sbjct: 158 QFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFKL-- 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
+ L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L+E +
Sbjct: 215 IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGLLEKVAQ 274
Query: 248 TFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQ 305
D VV F G ++ + HPI ++ L+ GF V+ GTGLVH AP G
Sbjct: 275 EIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHTAPGFGA 331
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +L + +
Sbjct: 332 DDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 390 THSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|309804256|ref|ZP_07698333.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
gi|308163659|gb|EFO65929.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
Length = 928
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPKTIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 EAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 229/400 (57%), Gaps = 17/400 (4%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VP
Sbjct: 34 NDLYE-QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H
Sbjct: 93 GWDTHGLPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF ++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
KL + L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L
Sbjct: 211 AFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGL 268
Query: 242 VESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHC 299
+E + D VV F G ++ + HPI ++ L+ GF V+ GTGLVH
Sbjct: 269 LEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP G DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGAL 383
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + + HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 384 LKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPKTIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|289435362|ref|YP_003465234.1| hypothetical protein lse_2001 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171606|emb|CBH28152.1| ileS [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 921
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ +LE T++ +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKKSASIFVTFKVTDGKG-VLEPGTNI--VIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ L K F+ I V+ G L I HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLAGLREKLGFEDAI-VLKTVRGSELDRIVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 IFYDTANKMVTERLEEVGALLKLEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 EAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TISHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SDLFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ +P+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGESPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T +S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYENLREVDKYMLIKLDDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + + R + + L
Sbjct: 692 DSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAADSKDRRAMQTVFYESVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 225/398 (56%), Gaps = 16/398 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNADRPSYILHDGPPYANGEVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKKSASIFVT 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ +LE T++ +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKG-VLEPGTNI--VIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L K F+ I V+ G L I HP RD ++ ++ GTG VH A
Sbjct: 269 AGLREKLGFEDAI-VLKTVRGSELDRIVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEA-PGFEGIFYDTANKMVTERLEEVGALLK 384
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 LEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLL 422
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L E HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGIFYDTANKMVTERLEEVGALLKLEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ VN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATSQWFASIDAFRDDLLEAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TISHISDLFREHGSNVWFERDVKDLL 502
>gi|383787394|ref|YP_005471963.1| isoleucyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
gi|403314392|sp|Q9XDB4.3|SYI_FERPD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|383110241|gb|AFG35844.1| Isoleucyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
Length = 912
Score = 352 bits (904), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 220/620 (35%), Positives = 326/620 (52%), Gaps = 65/620 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY+K ++ P D + +IWTTTPW++PAN IA +
Sbjct: 192 TALAEAEIEYH-DHESPSIYVKFQMVDKP--------DTYIVIWTTTPWTIPANVAIALH 242
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P Y V IVA+ L++ D +VV F G+ L+ HP+ R
Sbjct: 243 PDYTYVKIKVDEEYWIVAEGLLQKFAADVGIDFEVVEKFVGKELEGKLTKHPLY--DRTS 300
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ A +V+ GTG VH AP HG++D+ L +PVL+ + ++G+++ +AG EGL
Sbjct: 301 VVVLADYVTLEDGTGCVHTAPGHGEEDYQTGLKYNLPVLSPVDDEGRFTKEAGK-YEGLK 359
Query: 598 ILGDGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 654
I K V L ++ HSYP+ WR K PV+ +A+ QWFI D ++ + L
Sbjct: 360 IWDANKVIVEDLKNNGSLIKAGKISHSYPHCWRCKGPVMFRATPQWFISVDKNNLRGKVL 419
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+++V + P + + + +RP W ISRQRVWGVPIP D + + I+HF
Sbjct: 420 EEIKKVKWYPAWGETRITAMVQERPDWTISRQRVWGVPIPAVKCKDCGEVTLEPKVIEHF 479
Query: 713 CTLIDEHGPDFWWSLSVEQLLNT-----SDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
++ E G D W+ L V +L+ + + N K++D LD+W DSG SW V++ K
Sbjct: 480 ANIVKEKGTDAWFELDVNELIPADFKCPACGSKNFEKTHDTLDVWIDSGCSWEAVIRSKG 539
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
P +Y+EG DQ GWF SS+ S A TAPF+ V HGF+ DE+G KMSKS+GNVI
Sbjct: 540 ERFPVDLYLEGDDQHRGWFQSSIFLSTAKAGTAPFKAVVTHGFIKDEQGRKMSKSLGNVI 599
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+I YG D+LR WVA+ D + +G
Sbjct: 600 DPMEIVN-----------------------------KYGADILRLWVASTDFFD-NIRVG 629
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY-----VDVYMLKRLCEFQNTMD 938
KNI+ + +K+R++LRYLL L++ +E+ + Y +D + L RL +F +
Sbjct: 630 KNIIEQQVEVYRKLRNTLRYLLSNLYDFTEA--DLLPYEKLLPLDKWALGRLQKFIEQIT 687
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+Y++ + + ELSA Y ++KDRLY ++ + R S LH I L+
Sbjct: 688 QYYEGFEYSKVYNATVKYCTTELSAVYLDILKDRLYVEAKDSIYRRSAQTALHYILEALI 747
Query: 999 RTVAPIMPHLAEEVY--SHL 1016
+ +API+P AEE Y SHL
Sbjct: 748 KILAPIIPFTAEEAYQESHL 767
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 222/391 (56%), Gaps = 17/391 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
E+Y E P ++LHDGPPYANG H+G A+NKILKD R ++G RV +VPG
Sbjct: 34 KEIYKKTLETRANAPTYLLHDGPPYANGDIHLGTAMNKILKDFVTRYKTMRGYRVPFVPG 93
Query: 65 WDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE + TS + K SP +IRK K FAL+ ++ Q+ EF+ GV DWEH
Sbjct: 94 WDTHGLPIEHRVTTSLGEEAKKKSPAEIRKLCKEFALKYVDIQREEFKRLGVKGDWEHP- 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D +Y + L F L + +YR KPVYW P+ RTALAE+E+EY DH S SIY+
Sbjct: 153 YITLDPDYEYHILDVFKTLVENGNVYRGNKPVYWCPTCRTALAEAEIEYH-DHESPSIYV 211
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
K ++ P D + +IWTTTPW++PAN IA +P Y V IVA+ L
Sbjct: 212 KFQMVDKP--------DTYIVIWTTTPWTIPANVAIALHPDYTYVKIKVDEEYWIVAEGL 263
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
++ D EVV F G+ L+ HP+ R ++ A +V+ GTG VH AP
Sbjct: 264 LQKFAADVGIDFEVVEKFVGKELEGKLTKHPLY--DRTSVVVLADYVTLEDGTGCVHTAP 321
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV-EPDVLWT 360
HG++D+ L +PVL+ + ++G+++ +AG EGL I K V L ++
Sbjct: 322 GHGEEDYQTGLKYNLPVLSPVDDEGRFTKEAGK-YEGLKIWDANKVIVEDLKNNGSLIKA 380
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
HSYP+ WR K PV+ +A+ QWFI ++
Sbjct: 381 GKISHSYPHCWRCKGPVMFRATPQWFISVDK 411
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPV 1164
L+ + ++G+++ +AG EGL I K V L ++ HSYP+ WR K PV
Sbjct: 339 LSPVDDEGRFTKEAGK-YEGLKIWDANKVIVEDLKNNGSLIKAGKISHSYPHCWRCKGPV 397
Query: 1165 ILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+ +A+ QWFI D ++ + L ++ V + P + + + +RP W ISRQRVWGVP
Sbjct: 398 MFRATPQWFISVDKNNLRGKVLEEIKKVKWYPAWGETRITAMVQERPDWTISRQRVWGVP 457
Query: 1223 IPVF--YDGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
IP D + + I+HF ++ E G D W+ L V +L+
Sbjct: 458 IPAVKCKDCGEVTLEPKVIEHFANIVKEKGTDAWFELDVNELI 500
>gi|315653381|ref|ZP_07906303.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
gi|315489306|gb|EFU78946.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
Length = 928
Score = 352 bits (904), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNCEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 EAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 229/400 (57%), Gaps = 17/400 (4%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VP
Sbjct: 34 NDLYE-QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H
Sbjct: 93 GWDTHGLPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF ++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
KL + L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L
Sbjct: 211 AFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGL 268
Query: 242 VESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHC 299
+E + D VV F G ++ + HPI ++ L+ GF V+ GTGLVH
Sbjct: 269 LEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP G DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGAL 383
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + + HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 384 LKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|309808603|ref|ZP_07702495.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
gi|325913434|ref|ZP_08175800.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
gi|308168077|gb|EFO70203.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
gi|325477203|gb|EGC80349.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
Length = 928
Score = 352 bits (904), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 EAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 229/400 (57%), Gaps = 17/400 (4%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VP
Sbjct: 34 NDLYE-QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H
Sbjct: 93 GWDTHGLPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF ++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
KL + L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L
Sbjct: 211 AFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGL 268
Query: 242 VESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHC 299
+E + D VV F G ++ + HPI ++ L+ GF V+ GTGLVH
Sbjct: 269 LEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP G DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGAL 383
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + + HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 384 LKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|317051698|ref|YP_004112814.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316946782|gb|ADU66258.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 925
Score = 352 bits (904), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 324/622 (52%), Gaps = 57/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
TALAE+E+EY DH S S+Y+ + + L+G TD+ +IWTTTPW+LPAN +
Sbjct: 192 TALAEAEVEYH-DHTSDSVYVAFPVVSALGGIIPELQGKTDVSIVIWTTTPWTLPANLAV 250
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKE 533
NP LEYS +IVA L+ +L F D ++ FPG L++ HP
Sbjct: 251 CLNPELEYSAVETSRGILIVASQLLGSLMQIFGFDEFSILATFPGAVLENSVCGHPFI-- 308
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+RD ++ V++ GTG VH AP HG +D+++ L + N + N G + + P
Sbjct: 309 ERDSMVIMGDHVTTEAGTGAVHTAPGHGMEDYIVGLKYGLEPYNPVDNHGVFRAEV-PHF 367
Query: 594 EGLNILGDGKDQVLHLVEP-DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER--IK 650
G++I + H+ + +L +HSYP+ WR KKPVI +A+ QWFI E ++
Sbjct: 368 GGMHINKANPAIIEHMKQSGSLLAGSRIEHSYPHCWRCKKPVIYRATPQWFISMEHNDLR 427
Query: 651 PEALACL-EEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEA 707
++L + EEV +VP + + + I RP WC+SRQR+WGVPI V Y + + + A
Sbjct: 428 EKSLQQIKEEVTWVPAWGRDRIYNMIENRPDWCVSRQRLWGVPITVLYCSQCEEPLQDIA 487
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT-----KSNDILDIWFDSGISWSHV 762
+ LI+ G D W+ V L ++ K DILD+WFDSG++ + V
Sbjct: 488 VFEKAANLIESEGVDAWYERPVSDFLQPGTTCTHCGHGEFYKEKDILDVWFDSGVTHAAV 547
Query: 763 LKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
L+ + PA +Y+EG DQ GWF SSLLT+VA + AP++ V HGFV+D KG KMSKS
Sbjct: 548 LRKRGLPWPADMYLEGSDQHRGWFHSSLLTAVATRGQAPYKTVLTHGFVLDGKGRKMSKS 607
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNV++ I + YG D+LR WVAA +D
Sbjct: 608 MGNVVAPDAIIK-----------------------------KYGADILRLWVAAEDYRD- 637
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQ 934
+ I I+N + ++IR++ RY+LG L++ + T +I D Y L R F+
Sbjct: 638 DLRISDEIINRLAESYRRIRNTARYMLGNLYDFNPLTDAILYGDMLEFDRYALARYHAFE 697
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y +++ NF ++SA Y ++KDRLY + +G R S LH I
Sbjct: 698 KRVLDAYENYEFHVIYHACNNFCSVDMSAQYLDIIKDRLYAEDADGFKRRSAQSALHLIL 757
Query: 995 HVLLRTVAPIMPHLAEEVYSHL 1016
++R +AP++ EEVY HL
Sbjct: 758 SGMMRLLAPVLSFTMEEVYQHL 779
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 220/393 (55%), Gaps = 13/393 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++YS +++ GK F+LHDGPPYANG HIGHA+NKILKDI ++ +QG + YVPGW
Sbjct: 35 DIYSAIQQSRQGKSLFVLHDGPPYANGHLHIGHALNKILKDIIIKQKSMQGFQAPYVPGW 94
Query: 66 DCHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
DCHGLPIEL KA+ + +D R+ + A I Q+ EF+ +GV W+ Y
Sbjct: 95 DCHGLPIELGVDKALGKDKHTTTAVDKRQLCREHAARYIEIQREEFQRFGVFGAWDEP-Y 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y + + + + + +YR LKP+YW TALAE+E+EY DH S S+Y+
Sbjct: 154 LTMDFAYEADIVRELGSFMAKGSLYRGLKPIYWCCDCVTALAEAEVEYH-DHTSDSVYVA 212
Query: 183 IKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
+ + L+G TD+ +IWTTTPW+LPAN + NP LEYS +IVA
Sbjct: 213 FPVVSALGGIIPELQGKTDVSIVIWTTTPWTLPANLAVCLNPELEYSAVETSRGILIVAS 272
Query: 240 CLVESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
L+ SL F D ++ FPG L++ HP +RD ++ V++ GTG VH
Sbjct: 273 QLLGSLMQIFGFDEFSILATFPGAVLENSVCGHPFI--ERDSMVIMGDHVTTEAGTGAVH 330
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP-DV 357
AP HG +D+++ L + N + N G + + P G++I + H+ + +
Sbjct: 331 TAPGHGMEDYIVGLKYGLEPYNPVDNHGVFRAEV-PHFGGMHINKANPAIIEHMKQSGSL 389
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 390
L +HSYP+ WR KKPVI +A+ QWFI E
Sbjct: 390 LAGSRIEHSYPHCWRCKKPVIYRATPQWFISME 422
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP-DVLWTENYQHSYPYDWRTKKPVI 1165
N + N G + + P G++I + H+ + +L +HSYP+ WR KKPVI
Sbjct: 352 NPVDNHGVFRAEV-PHFGGMHINKANPAIIEHMKQSGSLLAGSRIEHSYPHCWRCKKPVI 410
Query: 1166 LKASQQWFIDTER--IKPEALACL-EGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI E ++ ++L + E V +VP + + + I RP WC+SRQR+WGVP
Sbjct: 411 YRATPQWFISMEHNDLREKSLQQIKEEVTWVPAWGRDRIYNMIENRPDWCVSRQRLWGVP 470
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSNQGLL 1280
I V Y + + + A + LI+ G D W+ PV L + T G
Sbjct: 471 ITVLYCSQCEEPLQDIAVFEKAANLIESEGVDAWYERPVSDFLQP---GTTCTHCGHGEF 527
Query: 1281 Y 1281
Y
Sbjct: 528 Y 528
>gi|406670579|ref|ZP_11077824.1| isoleucine-tRNA ligase [Facklamia hominis CCUG 36813]
gi|405582095|gb|EKB56101.1| isoleucine-tRNA ligase [Facklamia hominis CCUG 36813]
Length = 927
Score = 352 bits (904), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 218/623 (34%), Positives = 332/623 (53%), Gaps = 57/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SIY+ K+ + + E A +IWTTTPW+LPAN IA
Sbjct: 192 SSLAEAEVEYQ-DVTSPSIYVAFKVRKGNGVVDEQA---EFVIWTTTPWTLPANMAIAAL 247
Query: 478 PALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
A Y V + IVA+ L+E++ K D + + G+ + + HP R
Sbjct: 248 KAATYVQVKVDERHFIVAQELLESIAKEIGWQDYSIEKTYKGEQFEGVEAQHPFY--DRP 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
KL+ V+ GTGLVH AP HG+DD+ + L + VL+ + ++G ++ +A PG EGL
Sbjct: 306 SKLVFGDHVTLDSGTGLVHTAPGHGEDDYWVGLEYGLDVLSPVDSKGHFTNEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
L G+ +VL ++E + +L + HSYP+DWRTKKPVI +A+ QWF ++ + E L
Sbjct: 365 FYL-KGQKKVLEIIEENGSLLHYSEFVHSYPHDWRTKKPVIYRATPQWFASIDKFRDELL 423
Query: 655 ACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEANI-KHF 712
+E +V + S K+ + + I R W ISRQR WGVP+P+FY D + +AN+ H
Sbjct: 424 DNVEHKVKWHHPSGKRRIYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAILDANVMNHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
LI+ G + W+ S LL + N TK DI+D+WFDSG S++ VL+ +
Sbjct: 484 ADLIENEGSNVWFERSATDLLPDGYSHPGSPNGEFTKETDIMDVWFDSGTSYAGVLQTRK 543
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA++Y+EG DQ GWF SS TSVA P++ V GFV D KG KMSKS+GNV
Sbjct: 544 DLVFPANMYLEGSDQYRGWFNSSFTTSVAAFACPPYKEVLSQGFVNDGKGQKMSKSLGNV 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I + + G D++R WVA + V +
Sbjct: 604 IDPESV-----------------------------MDELGADIIRLWVAT-VDYESDVRV 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R++LG++++ + ++S+ +D YM F++ +
Sbjct: 634 SNEILKQVSESYRKIRNTIRFMLGLVNDFDPNKDAVSKDKLSALDAYMFANFQTFKDDLL 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
T Y E+ Y+ + ++NFV +LSAFY + KD +Y DS N R S ++ + LL
Sbjct: 694 TDYEEYHYSSLYKRVMNFVSTDLSAFYLNVAKDIVYIDSQNSFNRRSMQTVIYQVLKELL 753
Query: 999 RTVAPIMPHLAEEVYSHLPSRQG 1021
+ PI+ H EE + LP +G
Sbjct: 754 ILLTPILVHTCEEAWKSLPGVEG 776
Score = 266 bits (681), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/399 (40%), Positives = 228/399 (57%), Gaps = 15/399 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY +E + ++LHDGPPYANG H+GHA+NKI KD +R + G R YVPG
Sbjct: 34 ADLYQKIQEKNISREPWVLHDGPPYANGKIHMGHALNKITKDFIVRYKSMSGYRSPYVPG 93
Query: 65 WDCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE +K K S D R K +ALE + Q F+ GV DW+H
Sbjct: 94 WDTHGLPIETALQKNKGINRKEYSITDFRDLCKEYALEQVKGQMKTFKRLGVSGDWDH-P 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY Q+ F + ++ YIY+ KPV+WS SS ++LAE+E+EY+ D S SIY+
Sbjct: 153 YLTLAPEYEAQQIRVFAKMAEKGYIYKGAKPVFWSWSSESSLAEAEVEYQ-DVTSPSIYV 211
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
K+ + + E A +IWTTTPW+LPAN IA A Y V + IVA+ L
Sbjct: 212 AFKVRKGNGVVDEQA---EFVIWTTTPWTLPANMAIAALKAATYVQVKVDERHFIVAQEL 268
Query: 242 VESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+ES+ K D + + G+ + + HP R KL+ V+ GTGLVH A
Sbjct: 269 LESIAKEIGWQDYSIEKTYKGEQFEGVEAQHPFY--DRPSKLVFGDHVTLDSGTGLVHTA 326
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VL 358
P HG+DD+ + L + VL+ + ++G ++ +A PG EGL L G+ +VL ++E + +L
Sbjct: 327 PGHGEDDYWVGLEYGLDVLSPVDSKGHFTNEA-PGFEGLFYL-KGQKKVLEIIEENGSLL 384
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF ++ + E L
Sbjct: 385 HYSEFVHSYPHDWRTKKPVIYRATPQWFASIDKFRDELL 423
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 6/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + ++G ++ +A PG EGL L +G+ +VL ++E + +L + HSYP+DWRTKKP
Sbjct: 345 LSPVDSKGHFTNEA-PGFEGLFYL-KGQKKVLEIIEENGSLLHYSEFVHSYPHDWRTKKP 402
Query: 1164 VILKASQQWFIDTERIKPEALACLE-GVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
VI +A+ QWF ++ + E L +E V + S K+ + + I R W ISRQR WGVP
Sbjct: 403 VIYRATPQWFASIDKFRDELLDNVEHKVKWHHPSGKRRIYNMIRDRGDWVISRQRAWGVP 462
Query: 1223 IPVFYDGDTIIVNEANI-KHFCTLIDEHGPDFWWSLPVEQLL 1263
+P+FY D + +AN+ H LI+ G + W+ LL
Sbjct: 463 LPIFYAEDGTAILDANVMNHVADLIENEGSNVWFERSATDLL 504
>gi|302191489|ref|ZP_07267743.1| isoleucyl-tRNA synthetase [Lactobacillus iners AB-1]
gi|309806571|ref|ZP_07700571.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
gi|308167050|gb|EFO69229.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
Length = 928
Score = 352 bits (904), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 EAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 225/394 (57%), Gaps = 16/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VPGWD HG
Sbjct: 39 QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H Y TF
Sbjct: 99 LPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-PYITFQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++ KL
Sbjct: 158 QFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFKL-- 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
+ L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L+E +
Sbjct: 215 IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGLLEKVAQ 274
Query: 248 TFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQ 305
D VV F G ++ + HPI ++ L+ GF V+ GTGLVH AP G
Sbjct: 275 EIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHTAPGFGA 331
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +L + +
Sbjct: 332 DDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 390 THSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|312874547|ref|ZP_07734572.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
gi|329921150|ref|ZP_08277672.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
gi|311089938|gb|EFQ48357.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
gi|328934788|gb|EGG31279.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
Length = 928
Score = 352 bits (904), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + L + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 DAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 229/400 (57%), Gaps = 17/400 (4%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VP
Sbjct: 34 NDLYE-QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H
Sbjct: 93 GWDTHGLPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y TF ++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
KL + L + + +IWTTTPW++PAN+ I NP +YS+ V +VA L
Sbjct: 211 AFKL--IDGKDLLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGL 268
Query: 242 VESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHC 299
+E + D VV F G ++ + HPI ++ L+ GF V+ GTGLVH
Sbjct: 269 LEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DV 357
AP G DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGAL 383
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + + HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 384 LKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|332638200|ref|ZP_08417063.1| isoleucyl-tRNA synthetase [Weissella cibaria KACC 11862]
Length = 929
Score = 352 bits (903), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 215/626 (34%), Positives = 325/626 (51%), Gaps = 55/626 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALA +E+EY D S + + ++ L D + + WTTTPW++PA+Q +A N
Sbjct: 191 SALAMAEIEYH-DIESDTAFFSERVKDGKGLL---DNDTYFIAWTTTPWTVPASQALALN 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQ 534
EYS KG++ IVA L+ + F D +VV F G+ L+ T HP
Sbjct: 247 ADFEYSQIQPKGSDKKYIVASALLGAVAPKFGWDEYEVVATFTGKELEMATTEHPFM--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R++ ++ A +V++ GTG VH AP G+DDF +PV+ + +QGK + +AGP E
Sbjct: 305 REILVVNADYVTADAGTGAVHTAPGFGEDDFATGQRYNMPVIMNVDDQGKMTAEAGPDFE 364
Query: 595 GLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K + L E D L E HSYP+DWRTKKPVI +A QWF + + +
Sbjct: 365 GVFYQDADKVSLQKLEEADALILHEPVVHSYPFDWRTKKPVIFRAVPQWFASIDSFRQDI 424
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L L++V F PE KK L + I R W ISRQRVWGVP+P+FY D T IV+ I H
Sbjct: 425 LDALDDVKFQPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIFYAEDGTAIVDPEIIDHI 484
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L+ EHG + W+ + LL N N TK DI+D+WFDSG S V+ +P
Sbjct: 485 AELVAEHGSNVWFEREAKDLLPEGYSNEHSPNGEFTKETDIMDVWFDSGTSHQGVMATRP 544
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+ +EG DQ GWF SSL+T VA+ AP+++V GFV+D G KMSKS+GN+
Sbjct: 545 NLSFPEDLVLEGSDQYRGWFNSSLITGVAVTGKAPYKSVLSQGFVLDGNGEKMSKSLGNI 604
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
IS +++ + G +++R WV + S V +
Sbjct: 605 ISPNEVVK-----------------------------EMGAEIIRLWVTSVDSS-ADVRV 634
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
++L+ + + +KIR+++R+LL + +I+ D Y R + +
Sbjct: 635 SMDLLSQTSETYRKIRNTMRFLLANTADFDPKADTIAFDDLVAADQYFYARFNKLVADIK 694
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + +++++NF+ +LSAFY KD LY ++ G AR S L+ + L
Sbjct: 695 AAYDVYDFQAVNKLVINFINVDLSAFYLDFAKDILYVEAPKGHARRSLQTVLYKVLVDLD 754
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFS 1024
+ + PI+PH AEE++ +L +G F+
Sbjct: 755 KLLLPILPHTAEEIFEYLEHEEGDFA 780
Score = 280 bits (715), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 226/394 (57%), Gaps = 14/394 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ +N GKP F+LHDGPPYANG HIGHA+NKI KDI +R + G +VPGWD HG
Sbjct: 39 QRQKMNEGKPSFMLHDGPPYANGNIHIGHAMNKISKDIIVRYKSMNGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K + P+ RK A+ FA + + TQ A+F+ G+ ADW+ N Y T
Sbjct: 99 LPIEQQLTKAGKDRKAVGPVIWRKMAEEFARKQVKTQMADFKRLGISADWD-NPYLTLLP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ QL F + K++ IYR KPV+WS SS +ALA +E+EY D S + + ++
Sbjct: 158 EFEAAQLRVFGEMAKKNLIYRGKKPVFWSWSSESALAMAEIEYH-DIESDTAFFSERVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESL 245
L D + + WTTTPW++PA+Q +A N EYS KG++ IVA L+ ++
Sbjct: 217 GKGLL---DNDTYFIAWTTTPWTVPASQALALNADFEYSQIQPKGSDKKYIVASALLGAV 273
Query: 246 KWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F D EVV F G+ L+ T HP R++ ++ A +V++ GTG VH AP G
Sbjct: 274 APKFGWDEYEVVATFTGKELEMATTEHPFM--DREILVVNADYVTADAGTGAVHTAPGFG 331
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-ENY 363
+DDF +PV+ + +QGK + +AGP EG+ K + L E D L E
Sbjct: 332 EDDFATGQRYNMPVIMNVDDQGKMTAEAGPDFEGVFYQDADKVSLQKLEEADALILHEPV 391
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A QWF + + + L
Sbjct: 392 VHSYPFDWRTKKPVIFRAVPQWFASIDSFRQDIL 425
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ +QGK + +AGP EG+ K + L E D L E HSYP+DWRTKKPVI +
Sbjct: 349 VDDQGKMTAEAGPDFEGVFYQDADKVSLQKLEEADALILHEPVVHSYPFDWRTKKPVIFR 408
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A QWF + + + L L+ V F PE KK L + I R W ISRQRVWGVP+P+FY
Sbjct: 409 AVPQWFASIDSFRQDILDALDDVKFQPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIFY 468
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T IV+ I H L+ EHG + W+ + LL
Sbjct: 469 AEDGTAIVDPEIIDHIAELVAEHGSNVWFEREAKDLL 505
>gi|359427506|ref|ZP_09218554.1| isoleucyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236923|dbj|GAB00093.1| isoleucyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 945
Score = 352 bits (903), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 227/673 (33%), Positives = 351/673 (52%), Gaps = 78/673 (11%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + +++G I + G H PG +ALAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSLGAI-AKAG--HIEPGLKPVNWCMDCGSALAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---K 488
+ + L + L ++ ATD+ +IWTTTPW+LPANQ +A + ++Y + V +
Sbjct: 221 VGFSVVDLKDLSTRLNVDVQDATDI--VIWTTTPWTLPANQAVALHAEIDYQLVQVTTER 278
Query: 489 GA-NVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 546
G N I+AK L+E+ ++ + VV DF G ++++ HP+ + R + ++ V
Sbjct: 279 GTQNFILAKDLIESAIERYKLENPVVLADFKGAAIENLLLQHPLLTD-RQVPVILGEHVI 337
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 606
++ GTG VH AP HG DD+ + L + V N + G Y P A P G +I +
Sbjct: 338 ATSGTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGVYLPTA-PIFAGEHIYKANPQII 396
Query: 607 LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNF 662
L LW +HSYP+ WR K P+I +A+ QWFI D ++ AL +E ++ F
Sbjct: 397 EALGAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDANGLRQNALKTIENDIEF 456
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN---IKHFCTLIDEH 719
VP+ + ++ I RP WCISRQR WGVPIP F DT ++ I+ LI++
Sbjct: 457 VPDWGQSRIQSMIEGRPDWCISRQRTWGVPIPFFVHKDTNALHPRTPELIEEVAKLIEQE 516
Query: 720 GPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEG 774
G D W++ + + N + D LD+WFDSG + VL+++ PA +Y+EG
Sbjct: 517 GIDGWYNREAREFIGADAEQYNAVR--DTLDVWFDSGTTHYAVLRERDDLQDPADLYLEG 574
Query: 775 MDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKK 834
DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GN+I+ DI +
Sbjct: 575 SDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSLGNIITPQDIIKD--- 631
Query: 835 LPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDV 894
G D LR+W+A+ A + GK I + + D
Sbjct: 632 --------------------------MGADGLRFWIAS-ADYRYEMTAGKEIFSRASDGY 664
Query: 895 QKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARAS 950
++IR++LR+LL L+ ST ++ +D Y+L+R E Q T+ Y E + +
Sbjct: 665 RRIRNTLRFLLANLNGFKPSTDALPVDQLIALDQYILQRAAEVQKTIQQAYEEMNFHIVT 724
Query: 951 RVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAE 1010
L NF +N+L FY ++KDR Y + +AR S L++I +R ++PI+ A+
Sbjct: 725 NALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSAQTALYHIVQAFVRWMSPILSFTAQ 784
Query: 1011 EVYSHLPSRQGTF 1023
E + +P + G +
Sbjct: 785 EAWPLIPEQTGKY 797
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 241/443 (54%), Gaps = 33/443 (7%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y RE+ GK +++LHDGPPYANG H+GHAVNK+LKDI ++S +L G YVPGWD
Sbjct: 46 IYQQIRESRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVLDGFDTPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYSQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSLGAIAKAGHIEPGLKPVNWCMDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---KGA- 233
+ L + L ++ ATD+ +IWTTTPW+LPANQ +A + ++Y + V +G
Sbjct: 224 SVVDLKDLSTRLNVDVQDATDI--VIWTTTPWTLPANQAVALHAEIDYQLVQVTTERGTQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK L+ES ++ + VV DF G ++++ HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLIESAIERYKLENPVVLADFKGAAIENLLLQHPLLTD-RQVPVILGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P A P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGVYLPTA-PIFAGEHIYKANPQIIEAL 399
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALVCKTVGNILGRV 409
LW +HSYP+ WR K P+I +A+ QWFI D ++ AL KT+ N + V
Sbjct: 400 GAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDANGLRQNAL--KTIENDIEFV 457
Query: 410 GITHDRP--GTALAESELEYKPD 430
P G + +S +E +PD
Sbjct: 458 ------PDWGQSRIQSMIEGRPD 474
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW +HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTA-PIFAGEHIYKANPQIIEALGAVGRLWAHQPIKHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D ++ AL +E + FVP+ + ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDANGLRQNALKTIENDIEFVPDWGQSRIQSMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT ++ I+ LI++ G D W++ + + N +
Sbjct: 487 IPFFVHKDTNALHPRTPELIEEVAKLIEQEGIDGWYNREAREFIGADAEQYNAVR 541
>gi|333924454|ref|YP_004498034.1| isoleucyl-tRNA synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333750015|gb|AEF95122.1| Isoleucyl-tRNA synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 930
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 318/623 (51%), Gaps = 61/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY D S SIY+K + L + A+ +IWTTTPW+LPAN I+ +
Sbjct: 192 TALAEAEVEYA-DKTSPSIYVKFPVKDGKGVLPQDAS---VVIWTTTPWTLPANVAISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y VA+V G V+VA+ L+E+ K D +++ G+ L+ +T HP R+
Sbjct: 248 PEFAYVVATVNGEKVVVARELLESFKQAVGADNAEILAALKGEQLERVTCRHPFV--DRE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG++DF + +PVL + N+G+++ + G G
Sbjct: 306 SLVILGDHVTLDAGTGCVHTAPGHGEEDFEVGKKYNLPVLAPLDNKGRFTAEGGK-FAGQ 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
IL K V L E L + +H YP+ WR K P+ +A++QWF E + EAL
Sbjct: 365 FILDANKTIVEELKERGALMAHGHIKHQYPHCWRCKNPIFFRATEQWFASVEGFRQEALK 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ V +VP + + + + R WCISRQR WGVPIP+FY + I+ E I H
Sbjct: 425 AIRNVKWVPAWGEDRIYNMVEGRGDWCISRQRTWGVPIPIFYCNECGKEIITEETIAHIQ 484
Query: 714 TLIDEHGPDFWWSLSVEQLL------NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG D W++ +L+ + + K DI+D+WFDSG S VL K
Sbjct: 485 ELFKEHGSDIWFAKEANELVPPGLTCHHCGKGKDFRKETDIMDVWFDSGSSHLAVLDQKE 544
Query: 767 -------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
PA +Y+EG DQ GWF SSL TSVA+ P++ V HGFVVDEKG KMSKS+
Sbjct: 545 LWPDLHWPADLYLEGSDQHRGWFNSSLSTSVAVTGKPPYKAVLTHGFVVDEKGRKMSKSL 604
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ K + G D+LR WV++ A
Sbjct: 605 GNVVDP-----------------------------LKVINQMGADILRLWVSS-ADYRGD 634
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKR--LCEFQNTM 937
+ + +NIL + +KIR++ R+LLG L++ + + Y D+ L R L E +
Sbjct: 635 LSVSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVD-YADLPELDRVALMELHKLI 693
Query: 938 DTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y +++ + NF V ++SAFY ++KDRLY R + L+ +
Sbjct: 694 KRVLAAYENYEFHVVYHAIHNFCVLDMSAFYLDIIKDRLYTAPPASRERRAAQTVLYEVL 753
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
L+R + P++ EE+Y H+P
Sbjct: 754 DALVRLLVPVLAFTTEEIYQHMP 776
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/405 (40%), Positives = 231/405 (57%), Gaps = 15/405 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E GKP++ILHDGPPYANG H+GH +NK+LKD+ ++ + G YVPGW
Sbjct: 35 DLYHKVQEKNQGKPKYILHDGPPYANGHIHLGHTLNKVLKDMVVKYRSMSGYDAPYVPGW 94
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +AI S +SP++ R K K +AL Q EF+ GV DW+H Y
Sbjct: 95 DTHGLPIEQQAIKSLGINRHQVSPVEFRHKCKEYALNFAKIQSEEFQRLGVRGDWDHP-Y 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
+T +Y Q+ F + K+ YIY+ LKPVYW S TALAE+E+EY D S SIY+K
Sbjct: 154 YTLIPQYEATQIRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEVEYA-DKTSPSIYVK 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L + A+ +IWTTTPW+LPAN I+ +P Y VA+V G V+VA+ L+
Sbjct: 213 FPVKDGKGVLPQDAS---VVIWTTTPWTLPANVAISVHPEFAYVVATVNGEKVVVARELL 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES K D E++ G+ L+ +T HP R+ ++ V+ GTG VH AP
Sbjct: 270 ESFKQAVGADNAEILAALKGEQLERVTCRHPFV--DRESLVILGDHVTLDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG++DF + +PVL + N+G+++ + G G IL K V L E L
Sbjct: 328 GHGEEDFEVGKKYNLPVLAPLDNKGRFTAEGGK-FAGQFILDANKTIVEELKERGALMAH 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+ +H YP+ WR K P+ +A++QWF E + EAL K + N+
Sbjct: 387 GHIKHQYPHCWRCKNPIFFRATEQWFASVEGFRQEAL--KAIRNV 429
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ N+G+++ + G G IL K V L E L + +H YP+ WR K P+ +
Sbjct: 348 LDNKGRFTAEGGK-FAGQFILDANKTIVEELKERGALMAHGHIKHQYPHCWRCKNPIFFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF E + EAL + V +VP + + + + R WCISRQR WGVPIP+FY
Sbjct: 407 ATEQWFASVEGFRQEALKAIRNVKWVPAWGEDRIYNMVEGRGDWCISRQRTWGVPIPIFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ I+ E I H L EHG D W++ +L+
Sbjct: 467 CNECGKEIITEETIAHIQELFKEHGSDIWFAKEANELV 504
>gi|328860750|gb|EGG09855.1| hypothetical protein MELLADRAFT_34324 [Melampsora larici-populina
98AG31]
Length = 1006
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 227/661 (34%), Positives = 348/661 (52%), Gaps = 56/661 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-----LHALIWTTTPWSLPAN 471
GTALAE+E+EY DH S S+Y + + L E D + ++WTTTPW+L AN
Sbjct: 193 GTALAEAEIEYNEDHRSLSVYTTFDVVRPSKRLAELLKDHELKSVKLVVWTTTPWTLVAN 252
Query: 472 QFIAFNPALEYSV-----ASVKGANVIVAKC---LVENLKWTFQTDIDVVCDFPGQYLQD 523
Q +A + +YS+ +S +I A +++ + ++ ++VV + G L
Sbjct: 253 QAVALSSHDQYSIVKDTRSSSSNELLIFATSRLPVLQEILGGVESPLEVVGELTGGELSS 312
Query: 524 ITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF-----LLALAEKIPVLNL 578
+Y H + L A V+ G+GLVH AP+HGQDDF + + +++
Sbjct: 313 TSYTHDFTNCE--LPTFVAKHVTMKSGSGLVHTAPSHGQDDFHAYNSFMTDHLSLRYIDV 370
Query: 579 ITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLV-EPDVLWTE--NYQHSYPYDWRT 630
+ + G++ D L+G +L DG V+ ++ + + L E +H YPYDWRT
Sbjct: 371 VDDLGRFKIDGETTEWMDQLKGKEVLYDGNRHVITMLRQQNRLLGEVIKIRHKYPYDWRT 430
Query: 631 KKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWG 690
KKPVI K + QWFI E+I+P ALA L +V F PE A+ L + R WCISRQR WG
Sbjct: 431 KKPVITKITPQWFISLEKIRPLALASLSKVRFHPERARTRLESFLHSRSEWCISRQRPWG 490
Query: 691 VPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDI 748
VPIPV YD T ++ +I H +++ G D WW V+ + V + KS D
Sbjct: 491 VPIPVLYDVATNLPLLTAESILHIAHVLEVKGTDHWWQGPVQDFI-PPGVEGSFKKSTDT 549
Query: 749 LDIWFDSGISWSHVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT-APFRNVFLHGFV 807
+D+W DSG+SW LKD+ A++ +EG DQ GWF S L TS+A + + +++V HGF+
Sbjct: 550 MDVWLDSGMSWL-TLKDQKANLVLEGSDQHRGWFQSLLWTSIACHSSESVYQSVVTHGFI 608
Query: 808 VDEKGAKMSKSVGNVISAHDITQG--------AKKLPAYEKSVGNVISAHDI-------- 851
+D+ G KMSKS+GNVIS D+ G + P Y++S + +S+ +
Sbjct: 609 LDKNGRKMSKSLGNVISPMDVLDGNMVQYFKSSLSNPCYDRSADSKLSSLSVWEPAIEHG 668
Query: 852 TQGAKKLPAYGVDVLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN 910
T K P +G+DVLRWW ++ +KD V I + L + +K+RS+ R+LLG
Sbjct: 669 THQLVKRPRFGIDVLRWWASSVDFTKD--VSITFDQLGYISETCRKLRSTARFLLGNTFP 726
Query: 911 HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVK 970
+ ++ Y L + EF + + + Y + + +++ F N LSAFYF + K
Sbjct: 727 DGTIYFATHIQIERYTLHAVYEFYHAIISAYNVMSFNQVVQLITEFRGNTLSAFYFEVSK 786
Query: 971 DRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGT----FSSF 1026
D LY D+ R + ++ + I +V +API+PHLAEE+ H+ + FS F
Sbjct: 787 DTLYNDADKSVDRQNVVYVMSQILNVYRFALAPILPHLAEEISLHMKTNNEESVEGFSIF 846
Query: 1027 C 1027
C
Sbjct: 847 C 847
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 241/446 (54%), Gaps = 41/446 (9%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
L+ WQ++ + +P + LHDGPPYANG H+GH +NKILKDI R LL G R++YVPG+
Sbjct: 36 RLWDWQKKQ-SDRPVWTLHDGPPYANGPLHMGHTLNKILKDIINRVKLLDGYRINYVPGF 94
Query: 66 DCHGLPIELKAI-----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
DCHGLP+ELKA+ +S+ P+ IR A+ A + Q EFE +L DW
Sbjct: 95 DCHGLPLELKAVEALRESSELNQSDPIVIRSLARQAADTGVQLQTKEFERLSILTDWS-K 153
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
+ T D +Y Q+ F + + DYIYR KPVY+SPSS TALAE+E+EY DH S S+Y
Sbjct: 154 AWRTMDPKYEIQQIRLFAKMLENDYIYRSSKPVYFSPSSGTALAEAEIEYNEDHRSLSVY 213
Query: 181 LKIKLNQVPAHLLEGATD-----LHALIWTTTPWSLPANQFIAFNPALEYSV-----ASV 230
+ + L E D + ++WTTTPW+L ANQ +A + +YS+ +S
Sbjct: 214 TTFDVVRPSKRLAELLKDHELKSVKLVVWTTTPWTLVANQAVALSSHDQYSIVKDTRSSS 273
Query: 231 KGANVIVAKCLVESLKWTF---QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF 287
+I A + L+ ++ +EVV + G L +Y H +L A
Sbjct: 274 SNELLIFATSRLPVLQEILGGVESPLEVVGELTGGELSSTSYTHDFT--NCELPTFVAKH 331
Query: 288 VSSSKGTGLVHCAPAHGQDDF-----LLALAEKIPVLNLITNQGKYSPDAGPG-----LE 337
V+ G+GLVH AP+HGQDDF + + ++++ + G++ D L+
Sbjct: 332 VTMKSGSGLVHTAPSHGQDDFHAYNSFMTDHLSLRYIDVVDDLGRFKIDGETTEWMDQLK 391
Query: 338 GLNILGDGKDQVLHLV-EPDVLWTE--NYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 394
G +L DG V+ ++ + + L E +H YPYDWRTKKPVI K + QWFI E+I+P
Sbjct: 392 GKEVLYDGNRHVITMLRQQNRLLGEVIKIRHKYPYDWRTKKPVITKITPQWFISLEKIRP 451
Query: 395 EALVCKTVGNILGRVGITHDRPGTAL 420
AL L +V +R T L
Sbjct: 452 LALAS------LSKVRFHPERARTRL 471
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 102/187 (54%), Gaps = 14/187 (7%)
Query: 1091 QGTFSSFCHFKVYH----HLNLITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLV- 1140
Q F ++ F H +++++ + G++ D L+G +L +G V+ ++
Sbjct: 349 QDDFHAYNSFMTDHLSLRYIDVVDDLGRFKIDGETTEWMDQLKGKEVLYDGNRHVITMLR 408
Query: 1141 EPDVLWTE--NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAK 1198
+ + L E +H YPYDWRTKKPVI K + QWFI E+I+P ALA L V F PE A+
Sbjct: 409 QQNRLLGEVIKIRHKYPYDWRTKKPVITKITPQWFISLEKIRPLALASLSKVRFHPERAR 468
Query: 1199 KSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
L + R WCISRQR WGVPIPV YD T ++ +I H +++ G D WW
Sbjct: 469 TRLESFLHSRSEWCISRQRPWGVPIPVLYDVATNLPLLTAESILHIAHVLEVKGTDHWWQ 528
Query: 1257 LPVEQLL 1263
PV+ +
Sbjct: 529 GPVQDFI 535
>gi|254583972|ref|XP_002497554.1| ZYRO0F08206p [Zygosaccharomyces rouxii]
gi|238940447|emb|CAR28621.1| ZYRO0F08206p [Zygosaccharomyces rouxii]
Length = 994
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 331/648 (51%), Gaps = 73/648 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP-AHLLEGA-----TDLHALIWTTTPWSLPAN 471
TALAE ELEY +H SK+ Y++ L + + L E A D+ LIWTTTPW+L +N
Sbjct: 225 TALAEGELEYNENHKSKAAYVEFPLTKDSCSKLFESANITPVADVSLLIWTTTPWTLFSN 284
Query: 472 QFIAFNPALEYSVA--SVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
+ I FN EY + + G N V+V L E L+ F + V G L + Y +
Sbjct: 285 RAICFNEKYEYQLLRDNNNGGNYVVVESNLAEKLE--FLINYQKVAAVSGSALSRLQYTN 342
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P+ ++ + LL V++S GTGLVH AP HG DD+ +A K+ V++ + G++ +
Sbjct: 343 PLLGDRVERPLLHGDHVTNSAGTGLVHTAPGHGFDDYNVAHNHKVEVVSPVDAAGRFKLE 402
Query: 589 AGP------------GLEGLNILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPV 634
P GL L + +L +++ + + +Y HSYPYDWR+KKPV
Sbjct: 403 ELPPHLHELLTEHQTGLPRLVLEPSTAKVILDMLQKMGMLCSSHDYTHSYPYDWRSKKPV 462
Query: 635 ILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIP 694
I++A+ QWF D +K +A+ LE+V F P+ L I R WCISRQR WGVPIP
Sbjct: 463 IIRATPQWFADLHDVKGDAIESLEKVKFYPDRGNARLSSFIKNRNEWCISRQRSWGVPIP 522
Query: 695 VFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLN------TSDVNSNVTKS 745
FY D D ++ E + H +I E G D W+ + + ++ NS +
Sbjct: 523 AFYKKDDPDVTLMTEETVAHVIQVIREKGIDAWFKFDDSNMADWLPPRYKNEANS-YYRG 581
Query: 746 NDILDIWFDSGISWSHV---------LKDKP---AHVYMEGMDQINGWFMSSLLTSVAL- 792
D +D+WFDSG +W+ + LK P A VY+EG DQ GWF SS LT VA
Sbjct: 582 KDTMDVWFDSGTAWNELKDFYLKELKLKQLPTYLADVYLEGSDQHRGWFQSSTLTRVAYS 641
Query: 793 -KHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDI 851
K APF+ + HGF +DE G KMSKS+GNVIS I QG D
Sbjct: 642 GKPVAPFKTLITHGFTLDENGIKMSKSIGNVISPDAIIQG------------------DK 683
Query: 852 TQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNH 911
T+G LPA GVD LR+ V A ++ V G I+N + ++K R + R+LLG L
Sbjct: 684 TRG---LPALGVDGLRYLV-AQSNFTADVAAGPVIMNHVAEALKKFRLAFRFLLGNLQKA 739
Query: 912 SESTGSIS--RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLV 969
+ S R +D Y L +L E Q T T Y E +++ + + N+LSA YF +
Sbjct: 740 TFQKISYDQLRPIDKYTLYKLQELQITARTFYNENNFSKVLTAVQYHMSNDLSALYFDIS 799
Query: 970 KDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
KD LY D+++ R L I + PI+P L +EV++ LP
Sbjct: 800 KDSLYSDALDSFKRQQIQTVLLQILLSYTAIIGPILPTLVQEVWNALP 847
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 230/404 (56%), Gaps = 30/404 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT-- 78
F+L DGPPYANG H GHA+NKILKDI R L QGK + Y PGWDCHGLPIE+KA+
Sbjct: 82 FVLQDGPPYANGDLHYGHALNKILKDIINRYQLSQGKYIFYKPGWDCHGLPIEMKALKQF 141
Query: 79 SKDKL--LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
+ D+L +SP+ IR A N A + I QK +F + ++ DW+ Y T + EY NQL
Sbjct: 142 NPDQLGKVSPVKIRAMASNHARKAIKLQKEQFGKFAIMTDWD-KPYVTMESEYEINQLRV 200
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP-AHLLEG 195
F L + I R KPVYW +RTALAE ELEY +H SK+ Y++ L + + L E
Sbjct: 201 FLKLVSRGLIKRQNKPVYWGTETRTALAEGELEYNENHKSKAAYVEFPLTKDSCSKLFES 260
Query: 196 A-----TDLHALIWTTTPWSLPANQFIAFNPALEYSVA--SVKGAN-VIVAKCLVESLKW 247
A D+ LIWTTTPW+L +N+ I FN EY + + G N V+V L E L+
Sbjct: 261 ANITPVADVSLLIWTTTPWTLFSNRAICFNEKYEYQLLRDNNNGGNYVVVESNLAEKLE- 319
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
F + + V G L + Y +P+ ++ + LL V++S GTGLVH AP HG DD
Sbjct: 320 -FLINYQKVAAVSGSALSRLQYTNPLLGDRVERPLLHGDHVTNSAGTGLVHTAPGHGFDD 378
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGP------------GLEGLNILGDGKDQVLHLVEP 355
+ +A K+ V++ + G++ + P GL L + +L +++
Sbjct: 379 YNVAHNHKVEVVSPVDAAGRFKLEELPPHLHELLTEHQTGLPRLVLEPSTAKVILDMLQK 438
Query: 356 DVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + +Y HSYPYDWR+KKPVI++A+ QWF D +K +A+
Sbjct: 439 MGMLCSSHDYTHSYPYDWRSKKPVIIRATPQWFADLHDVKGDAI 482
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 1147 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIA 1206
+ +Y HSYPYDWR+KKPVI++A+ QWF D +K +A+ LE V F P+ L I
Sbjct: 445 SHDYTHSYPYDWRSKKPVIIRATPQWFADLHDVKGDAIESLEKVKFYPDRGNARLSSFIK 504
Query: 1207 QRPYWCISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSL 1257
R WCISRQR WGVPIP FY D D ++ E + H +I E G D W+
Sbjct: 505 NRNEWCISRQRSWGVPIPAFYKKDDPDVTLMTEETVAHVIQVIREKGIDAWFKF 558
>gi|223043792|ref|ZP_03613835.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|417907106|ref|ZP_12550882.1| isoleucine--tRNA ligase [Staphylococcus capitis VCU116]
gi|222442889|gb|EEE48991.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|341596737|gb|EGS39328.1| isoleucine--tRNA ligase [Staphylococcus capitis VCU116]
Length = 916
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 322/620 (51%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFNVKDDKGVV---DSDAKFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V+G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVEGQKFIVAQALSETVADALGWDKDTIQLEKEFTGKELEYVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + G E
Sbjct: 305 RTSLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGQ-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLTEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +EE NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEETNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L EHG + W+ + LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 IADLFAEHGSNVWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++++ T I VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDYNPETDRIPENELLDVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 230/398 (57%), Gaps = 18/398 (4%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G +ILHDGPPYANG+ H+GHA+NKI+KD +R +QG YVPGWD
Sbjct: 37 YKKALEKNKGNQSYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FAL+ ++ QK +F+ GV D++ N Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSIAEFREKCKEFALKQVDIQKKDFKRLGVRGDFD-NPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFN 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ + +D +IWTTTPW++P+N I +P L+Y +V+G IVA+ L E+
Sbjct: 214 VKDDKGVV---DSDAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVEGQKFIVAQALSET 270
Query: 245 ----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L W T I++ +F G+ L+ + HP R ++ V++ GTG VH A
Sbjct: 271 VADALGWDKDT-IQLEKEFTGKELEYVEAQHPF--LDRTSLVINGDHVTTDAGTGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ +PV++ + ++G ++ + G EG+ K L E D L
Sbjct: 328 PGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 387 LDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + G EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEETNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHIADLFAEHGSNVWFEREAKDLL 504
>gi|253702345|ref|YP_003023534.1| isoleucyl-tRNA synthetase [Geobacter sp. M21]
gi|251777195|gb|ACT19776.1| isoleucyl-tRNA synthetase [Geobacter sp. M21]
Length = 925
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 332/642 (51%), Gaps = 67/642 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQ-----VPAHLLEGATDLHALIWTTTPWSLPAN 471
GTALAE+E+EY DH S S+++K L + VP L+G +IWTTTPW+LPAN
Sbjct: 191 GTALAEAEVEY-ADHKSPSVFVKFPLKEELGSVVPE--LDG-EKCSMVIWTTTPWTLPAN 246
Query: 472 QFIAFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
IA +P L+Y + +V IVA L E+ + +V+ FP + L+ HP
Sbjct: 247 LAIAIHPDLDYVALRLSSGDVVIVADGLKESFLKEIGAEGEVLARFPSRVLEKRLARHPF 306
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
++D +L V+ GTG VH AP HGQ+D+ L L E + + N + N+G++ +
Sbjct: 307 Y--EQDSVILLGEHVTLEAGTGCVHTAPGHGQEDYELGLKEGLDIYNPVDNRGRFYENI- 363
Query: 591 PGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTER- 648
G + K+ + L+E L + HSYP+ WR KKP+I +A++QWFI ER
Sbjct: 364 QFFGGQFVFDANKNVIEKLIEVGALLAQKEISHSYPHCWRCKKPIIFRATEQWFISMERN 423
Query: 649 -IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVN 705
++ +AL + VN++P+ ++ + I RP WC+SRQR WGVPI FY ++ +
Sbjct: 424 DLRGKALEQINNVNWIPKWGRERIYGMIENRPDWCVSRQRSWGVPITAFYCKSCGEVLAD 483
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWS 760
+ L EH D W+ + L S K DILD+WFDSG+S +
Sbjct: 484 GKIMHQIADLFAEHTSDIWYDWEASRFLPEGTCCPSCGKSEFDKETDILDVWFDSGVSHA 543
Query: 761 HVLK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
VL+ PA +Y+EG DQ GWF SSLL SV + AP++NV HGFV+D G KM
Sbjct: 544 AVLELRDNLSSPADMYLEGSDQHRGWFHSSLLASVGTRGRAPYKNVLTHGFVMDGAGRKM 603
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKSVGNV++ D+ + +G DVLR WVAA
Sbjct: 604 SKSVGNVVAPEDV-----------------------------IKKFGGDVLRLWVAAQDY 634
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKR-----L 930
+D + I + IL + ++IR++ RY+LG +H+ + T ++ Y D+ L R L
Sbjct: 635 RD-DLRISQEILTRLSESYRRIRNTCRYILGNIHDFNPDTDLVA-YADMPELDRWAMHQL 692
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
+ + Y + ++ + F E+SAFY ++KDR+Y + +AR SG +
Sbjct: 693 ELLKEKVLASYKDSEFHILYHAVNGFCTVEMSAFYLDILKDRVYTSKGSSQARRSGQTVM 752
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVY 1032
+ I L+R VAP++ AEEV++ +P GT S H +
Sbjct: 753 YLILDALVRMVAPVLSFTAEEVWAEMP---GTRESSVHLAQF 791
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/403 (39%), Positives = 225/403 (55%), Gaps = 18/403 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
EA KP ++LHDGPPYANG HIGHA+NKILKDI L+S ++G YVPGWDCHGLPI
Sbjct: 42 EAGKSKPRYVLHDGPPYANGHIHIGHALNKILKDIVLKSKRMEGFSAPYVPGWDCHGLPI 101
Query: 73 EL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
EL K + SK +S L++RK + +A + + Q+AEFE G+ +W+ Y T + Y
Sbjct: 102 ELQVEKNLGSKKHEISKLEMRKLCREYAAKFVAIQRAEFERLGIFGEWD-TPYLTMNASY 160
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ-- 187
+ + +Y+ KPV+W S TALAE+E+EY DH S S+++K L +
Sbjct: 161 EGAIARELARFAENGGLYKGKKPVHWCSSCGTALAEAEVEY-ADHKSPSVFVKFPLKEEL 219
Query: 188 ---VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VIVAKCLVE 243
VP L+G +IWTTTPW+LPAN IA +P L+Y + + VIVA L E
Sbjct: 220 GSVVPE--LDG-EKCSMVIWTTTPWTLPANLAIAIHPDLDYVALRLSSGDVVIVADGLKE 276
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
S + EV+ FP + L+ HP ++D +L V+ GTG VH AP H
Sbjct: 277 SFLKEIGAEGEVLARFPSRVLEKRLARHPFY--EQDSVILLGEHVTLEAGTGCVHTAPGH 334
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN- 362
GQ+D+ L L E + + N + N+G++ + G + K+ + L+E L +
Sbjct: 335 GQEDYELGLKEGLDIYNPVDNRGRFYENI-QFFGGQFVFDANKNVIEKLIEVGALLAQKE 393
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
HSYP+ WR KKP+I +A++QWFI ER + + N+
Sbjct: 394 ISHSYPHCWRCKKPIIFRATEQWFISMERNDLRGKALEQINNV 436
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + N+G++ + G + K+ + L+E L + HSYP+ WR KKP+I
Sbjct: 351 NPVDNRGRFYENI-QFFGGQFVFDANKNVIEKLIEVGALLAQKEISHSYPHCWRCKKPII 409
Query: 1166 LKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+A++QWFI ER ++ +AL + VN++P+ ++ + I RP WC+SRQR WGVPI
Sbjct: 410 FRATEQWFISMERNDLRGKALEQINNVNWIPKWGRERIYGMIENRPDWCVSRQRSWGVPI 469
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSN 1276
FY ++ + + L EH D W+ + L + KS
Sbjct: 470 TAFYCKSCGEVLADGKIMHQIADLFAEHTSDIWYDWEASRFLPEGTCCPSCGKSE 524
>gi|294648748|ref|ZP_06726207.1| isoleucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292825362|gb|EFF84106.1| isoleucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 945
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 227/673 (33%), Positives = 352/673 (52%), Gaps = 78/673 (11%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + +++G I + G H PG +ALAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSLGAI-AKAG--HIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---K 488
+ + L + A L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + + +
Sbjct: 221 VGFTVVDLKDLSARLSVDVQDVTDI--VIWTTTPWTLPANQAVAVHADIDYQLVQIQNDR 278
Query: 489 GA-NVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 546
GA N I+AK LVE+ ++ + VV DF G ++++ HP+ + R + ++ V
Sbjct: 279 GAQNFILAKDLVESAIERYKLENPVVLADFKGAVIENLLLQHPLITD-RQVPVIVGEHVI 337
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 606
++ GTG VH AP HG DD+ + L + V N + G Y P A P G +I +
Sbjct: 338 ATSGTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGVYLPTA-PIFAGEHIYKANPKII 396
Query: 607 LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNF 662
L LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL +E ++ F
Sbjct: 397 EALGATGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQTALNAIENDIEF 456
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN---IKHFCTLIDEH 719
VP+ K ++ I RP WCISRQR WGVPIP F DT ++ I+ LI++
Sbjct: 457 VPDWGKNRIQSMIEGRPDWCISRQRTWGVPIPFFLHKDTNALHPRTPELIEEVAQLIEQE 516
Query: 720 GPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEG 774
G D W++ + + N + D LD+WFDSG + VL+++ PA +Y+EG
Sbjct: 517 GIDAWYNRDASDFIGADAEHYNAVR--DTLDVWFDSGTTHYAVLREREELQDPADLYLEG 574
Query: 775 MDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKK 834
DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GN+I+ DI +
Sbjct: 575 SDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSLGNIITPQDIIKD--- 631
Query: 835 LPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDV 894
G D LR+W+A+ A + GK I + + D
Sbjct: 632 --------------------------MGADGLRFWIAS-ADYRYEMTAGKEIFSRASDGY 664
Query: 895 QKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARAS 950
++IR++LR+LL L+ ST ++ +D Y+L+R E Q T+ Y E + +
Sbjct: 665 RRIRNTLRFLLANLNGFKPSTDALPVDELIALDQYILQRAAEVQKTIQQAYEEMNFHIVT 724
Query: 951 RVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAE 1010
L NF +N+L FY ++KDR Y + +AR S L+++ +R ++PI+ A+
Sbjct: 725 NALTNFCINDLGGFYLDIIKDRQYTTKADSQARRSAQTALYHLVQAFVRWMSPILSFTAQ 784
Query: 1011 EVYSHLPSRQGTF 1023
E + +P + +
Sbjct: 785 EAWPLIPEQTDKY 797
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 226/408 (55%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R + GK +++LHDGPPYANG H+GHAVNK+LKDI ++S +L G YVPGWD
Sbjct: 46 IYQQIRTSRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVLDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSLGAIAKAGHIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---KGA- 233
+ L + A L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + + +GA
Sbjct: 224 TVVDLKDLSARLSVDVQDVTDI--VIWTTTPWTLPANQAVAVHADIDYQLVQIQNDRGAQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + VV DF G ++++ HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAIERYKLENPVVLADFKGAVIENLLLQHPLITD-RQVPVIVGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P A P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGVYLPTA-PIFAGEHIYKANPKIIEAL 399
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL
Sbjct: 400 GATGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQTAL 447
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW +HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTA-PIFAGEHIYKANPKIIEALGATGRLWAHQPIKHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E + FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAKGLRQTALNAIENDIEFVPDWGKNRIQSMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT ++ I+ LI++ G D W++ + + N +
Sbjct: 487 IPFFLHKDTNALHPRTPELIEEVAQLIEQEGIDAWYNRDASDFIGADAEHYNAVR 541
>gi|281492476|ref|YP_003354456.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
gi|281376140|gb|ADA65631.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
Length = 932
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 216/640 (33%), Positives = 333/640 (52%), Gaps = 58/640 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S S+Y+ K N V + D +IWTTT W+ P+N+ I +
Sbjct: 191 SSLAEAEIEYQ-DVKSPSLYVAFKANDVQGKV---PADTEFVIWTTTAWTFPSNRGIFVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P +Y V V+ ++AK L+E + + V+ G L+ +T HP RD
Sbjct: 247 PDYDYIVVQVENRKFLIAKDLLETVSEKIGWENPQVLQTIKGSELEYMTAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ +VS GTGLVH +P HG+DD+ + K+PV+ I QG ++ +A G EG
Sbjct: 305 SLVMVGDYVSLDSGTGLVHTSPNHGEDDYQYSRKYKLPVIEDIDAQGYFTAEA-EGFEG- 362
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ ++ VL + +L E++ HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 363 QFYDNVEELVLEKMRATDRLLHIEHFVHSYPHDWRTKKPVIYRATPQWFASIDQFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E V++V K L + + R W ISRQR WGVP+P+FY +G+ II E +H
Sbjct: 423 DEVERVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVPLPIFYGENGEPIITPETT-EHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L E G W+ + LL + + N TK DI+D+WFDSG SW+ VL ++
Sbjct: 482 AKLFAEFGSKVWFEREAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDSGSSWNGVLNERD 541
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++ V GFV+D KG KMSKS+GN
Sbjct: 542 YLSFPADLYLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFVLDGKGRKMSKSIGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I D+T+ +G D+LR WVA+ + V +
Sbjct: 602 ILPKDVTK-----------------------------KFGADILRLWVAS-IDAESDVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
+IL+ + +KIR++LR+L+ + + +I R VD YML + E +
Sbjct: 632 SMDILSQVSEVYRKIRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVKFNELVKQIR 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
T Y + + + ++NF+ N+LS+FY KD +Y ++ N R S ++ I L+
Sbjct: 692 TAYDNYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYVILKDLV 751
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
+ + PI+PH AEE +++L F+ + GS
Sbjct: 752 KILVPILPHTAEETWTYLEHEPENFAYLAEMPEAAEIPGS 791
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 235/396 (59%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY ++E GKP F+LHDGPPYANG H+GH++NKI KDI +R + G R YVPGWD
Sbjct: 36 LYEKRQELNEGKPSFMLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K K + LD ++ + +A++ ++ Q+++F+S GVLADW+ Y T
Sbjct: 96 THGLPIEQQLAKAGMKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWDR-PYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + ++ YIY+ KP+YWSPSS ++LAE+E+EY+ D S S+Y+ K
Sbjct: 155 LLPEYEAAQIRVFGKMAEKGYIYKGAKPIYWSPSSESSLAEAEIEYQ-DVKSPSLYVAFK 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
N V + D +IWTTT W+ P+N+ I +P +Y V V+ ++AK L+E+
Sbjct: 214 ANDVQGKV---PADTEFVIWTTTAWTFPSNRGIFVHPDYDYIVVQVENRKFLIAKDLLET 270
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+ + +V+ G L+ +T HP RD ++ +VS GTGLVH +P H
Sbjct: 271 VSEKIGWENPQVLQTIKGSELEYMTAKHPFY--DRDSLVMVGDYVSLDSGTGLVHTSPNH 328
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
G+DD+ + K+PV+ I QG ++ +A G EG + ++ VL + +L E
Sbjct: 329 GEDDYQYSRKYKLPVIEDIDAQGYFTAEA-EGFEG-QFYDNVEELVLEKMRATDRLLHIE 386
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 387 HFVHSYPHDWRTKKPVIYRATPQWFASIDQFRQNIL 422
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 15/163 (9%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLV------EPDVLWTENYQHSYPYDWRTKK 1162
I QG ++ +A EG G+ D V LV +L E++ HSYP+DWRTKK
Sbjct: 347 IDAQGYFTAEA----EGFE--GQFYDNVEELVLEKMRATDRLLHIEHFVHSYPHDWRTKK 400
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI +A+ QWF ++ + L +E V++V K L + + R W ISRQR WGVP
Sbjct: 401 PVIYRATPQWFASIDQFRQNILDEVERVDWVIPWGKTRLFNMVRDRGDWVISRQRAWGVP 460
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+P+FY +G+ II E +H L E G W+ + LL
Sbjct: 461 LPIFYGENGEPIITPETT-EHVAKLFAEFGSKVWFEREAKDLL 502
>gi|417645974|ref|ZP_12295859.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU144]
gi|329729986|gb|EGG66377.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU144]
Length = 916
Score = 352 bits (903), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELNYGQYNVNGHKYIVAQALSEAVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSSNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 229/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELNYGQYNVNGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EAVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|418325054|ref|ZP_12936264.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU071]
gi|418411613|ref|ZP_12984880.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BVS058A4]
gi|420163467|ref|ZP_14670214.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
gi|420167550|ref|ZP_14674202.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
gi|365228960|gb|EHM70132.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU071]
gi|394235156|gb|EJD80730.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
gi|394237578|gb|EJD83064.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
gi|410892339|gb|EKS40133.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BVS058A4]
Length = 916
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELNYGQYNVNGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 229/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELNYGQYNVNGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EEVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|319892187|ref|YP_004149062.1| isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
gi|386319541|ref|YP_006015704.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
gi|317161883|gb|ADV05426.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
gi|323464712|gb|ADX76865.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
Length = 915
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 324/621 (52%), Gaps = 62/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + A D +IWTTTPW+LP+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGIV---ADDAKFIIWTTTPWTLPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L Y +V G I+A+ LV+ + D + V DF G L+ I HP
Sbjct: 247 PELTYVQMNVDGTRYIIAEALVDAVAEQLGWDKEAVVREKDFKGSELEYIEAQHPFI--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DDF++ + V++ + ++G ++ + GP E
Sbjct: 305 RISLIINGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVISPLDDKGVFTAEGGP-FE 363
Query: 595 GLNILGDGKDQVLH--LVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G+ D +Q + L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 364 GM--FYDKANQAVTELLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQ 421
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
+ L +E+ F + K + + I R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 422 DILDAIEDTKFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-V 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L ++HG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 YHVADLFEQHGSNIWFERDAKDLLPEGFTHPGSPNGEFTKEQDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGRSPYKMLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI I + G D+ R WV++
Sbjct: 601 GNVIVPDTIVKQK-----------------------------GADIARLWVSS-VDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I ILN D +KIR++LR+LLG +++++ +T I+ VD Y+L RL EF
Sbjct: 631 VRISDEILNQVADVYRKIRNTLRFLLGNINDYNPATDRIAEADLLEVDRYILNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y F Y + + NF+ ELS FY KD LY + N R S L I
Sbjct: 691 GTLDHYESFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNAHKRRSMQTVLFEILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
+ + +API+PH AEEV+SH+
Sbjct: 751 NMTKLLAPIIPHTAEEVWSHI 771
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 228/401 (56%), Gaps = 20/401 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY E G+P FILHDGPPYANG H+GHA+NKILKD R +QG YVPGW
Sbjct: 35 DLYRKMLEKNEGQPSFILHDGPPYANGNLHMGHALNKILKDFINRYKTMQGFYTPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K ++ + R K + FA+E I+ QK +F GV D++ N Y
Sbjct: 95 DTHGLPIE-QALTKKGVKRKEMTTAEFRDKCQAFAMEQIDIQKKDFLRLGVNGDFD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ + A D +IWTTTPW+LP+N I +P L Y +V G I+A+ LV
Sbjct: 212 FDVKDSKGIV---ADDAKFIIWTTTPWTLPSNVAITVHPELTYVQMNVDGTRYIIAEALV 268
Query: 243 ESLKWTFQTDIEVVC---DFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
+++ D E V DF G L+ I HP R ++ V++ GTG VH
Sbjct: 269 DAVAEQLGWDKEAVVREKDFKGSELEYIEAQHPFI--DRISLIINGEHVTTDAGTGCVHT 326
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH--LVEPDV 357
AP HG+DDF++ + V++ + ++G ++ + GP EG+ D +Q + L E
Sbjct: 327 APGHGEDDFIVGQKYGLEVISPLDDKGVFTAEGGP-FEGM--FYDKANQAVTELLTEKGA 383
Query: 358 LWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L ++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 384 LLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ + L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LDDKGVFTAEGGP-FEGMFYDKANQAVTELLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E F + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIEDTKFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VYHVADLFEQHGSNIWFERDAKDLL 504
>gi|255021603|ref|ZP_05293646.1| Isoleucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
gi|340782477|ref|YP_004749084.1| Isoleucyl-tRNA synthetase [Acidithiobacillus caldus SM-1]
gi|254968991|gb|EET26510.1| Isoleucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
gi|340556629|gb|AEK58383.1| Isoleucyl-tRNA synthetase [Acidithiobacillus caldus SM-1]
Length = 937
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 225/679 (33%), Positives = 343/679 (50%), Gaps = 71/679 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPA--HLLEGATDL--HALIWTTTPWSLPANQ 472
G+ALAE+E+EY+ + +I + +P L A D+ +IWTTTPW+LPANQ
Sbjct: 191 GSALAEAEVEYQ-ERNDPAIDVTFVAADLPRWRERLHLAADVVPEVVIWTTTPWTLPANQ 249
Query: 473 FIAFNPALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+A +P EY + G I+A L E L ++ V FPG+ L+ + HP
Sbjct: 250 AVAVHPDYEYRLLREGGRWFILATELAETALARYGHPAVETVASFPGRALEGLMLQHPW- 308
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
E+R + +L V+ GTG VH APAHG DD+LL L +P + + G+Y D G
Sbjct: 309 -EERQVPILTGDHVTLEAGTGCVHTAPAHGVDDYLLGLQHHLPTDSPMLGSGRYRADLGA 367
Query: 592 GLEGLNILGDGKD--QVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTE 647
GL GL++ ++LH +L E HSYP+ WR K P++ +A+ QWFI D
Sbjct: 368 GLGGLSVQEANVRVPELLH-ARGRLLHREKIHHSYPHCWRHKTPLLFRATPQWFIRMDEG 426
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVF---YDGDTIIV 704
++ +ALA + ++PE ++ ++ +AQRP WCISRQR WGVP+ ++ + G+ +
Sbjct: 427 GLRQQALAAIATTRWIPEWGRERIQQMVAQRPDWCISRQRSWGVPVALYACSHCGEPL-R 485
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISW 759
+ A + TL++ G + W+ L + + + K DILD+WFDSG +
Sbjct: 486 DAALFERIATLVEAEGVEAWYRHPDSDFLQGDERCARCGHRHFDKVTDILDVWFDSGSTH 545
Query: 760 SHVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+ VL+ +P A +Y+EG DQ GWF SSLL SVA + AP+R V HGF VD +G K
Sbjct: 546 AFVLERRPELRSPADLYLEGSDQHRGWFQSSLLESVASRGRAPYRAVLTHGFTVDAEGRK 605
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS+GNVI+ I + YG D+LR WVA+
Sbjct: 606 MSKSLGNVIAPQQI-----------------------------IDRYGADILRLWVASED 636
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRL 930
+ +PI +IL D ++IR++ R++LG H+ + S +++ +D +ML RL
Sbjct: 637 YRG-EIPISDDILARLGDSYRRIRNTARFILGNNHDFTPSRDTLAPSELLEMDRWMLARL 695
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
+ Q + Y +FQ+ + + L F +L Y ++KDRLY AR S L
Sbjct: 696 GDLQEQIRAAYHDFQFVKVVQGLHQFCNLDLGGLYLDVLKDRLYTTPARSRARRSAQTVL 755
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSIN 1050
I ++R +API+ AE+++ H+P R F Q + D+
Sbjct: 756 QYILEAMVRWMAPILSFTAEDIWQHMPERPDASVFLSSFVELPQVA----------DAAA 805
Query: 1051 GEARLSGLHTLHNIFHVLL 1069
E R GL +L + L+
Sbjct: 806 LETRWQGLRSLREAINTLM 824
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/405 (39%), Positives = 223/405 (55%), Gaps = 17/405 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY +E +ILHDGPPYANG HIGHAVNK+LKDI +S L++G RV YVPGWD
Sbjct: 36 LYQRLQEERANAESYILHDGPPYANGKIHIGHAVNKVLKDIINKSRLMEGMRVPYVPGWD 95
Query: 67 CHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIE+ K + LSP R+ + +A I Q+A+FE G+L DW+H Y
Sbjct: 96 CHGLPIEVQVEKEFGRPGEKLSPAAFREACRAYAESQIAGQRADFERLGILGDWQHP-YR 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T D + L + L ++YR KPV+W +ALAE+E+EY+ + +I +
Sbjct: 155 TMDFRAEADILRELGRLTLAGFVYRGAKPVHWCVDCGSALAEAEVEYQ-ERNDPAIDVTF 213
Query: 184 KLNQVP--AHLLEGATDL--HALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
+P L A D+ +IWTTTPW+LPANQ +A +P EY + G I+A
Sbjct: 214 VAADLPRWRERLHLAADVVPEVVIWTTTPWTLPANQAVAVHPDYEYRLLREGGRWFILAT 273
Query: 240 CLVES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
L E+ L +E V FPG+ L+ + HP E+R + +L V+ GTG VH
Sbjct: 274 ELAETALARYGHPAVETVASFPGRALEGLMLQHPW--EERQVPILTGDHVTLEAGTGCVH 331
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKD--QVLHLVEPD 356
APAHG DD+LL L +P + + G+Y D G GL GL++ ++LH
Sbjct: 332 TAPAHGVDDYLLGLQHHLPTDSPMLGSGRYRADLGAGLGGLSVQEANVRVPELLH-ARGR 390
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALVC 399
+L E HSYP+ WR K P++ +A+ QWFI D ++ +AL
Sbjct: 391 LLHREKIHHSYPHCWRHKTPLLFRATPQWFIRMDEGGLRQQALAA 435
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 12/174 (6%)
Query: 1104 HHL---NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDW 1158
HHL + + G+Y D G GL GL++ E +V L+ +L E HSYP+ W
Sbjct: 347 HHLPTDSPMLGSGRYRADLGAGLGGLSV-QEANVRVPELLHARGRLLHREKIHHSYPHCW 405
Query: 1159 RTKKPVILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQ 1216
R K P++ +A+ QWFI D ++ +ALA + ++PE ++ ++ +AQRP WCISRQ
Sbjct: 406 RHKTPLLFRATPQWFIRMDEGGLRQQALAAIATTRWIPEWGRERIQQMVAQRPDWCISRQ 465
Query: 1217 RVWGVPIPVF---YDGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSD 1267
R WGVP+ ++ + G+ + + A + TL++ G + W+ P L +
Sbjct: 466 RSWGVPVALYACSHCGEP-LRDAALFERIATLVEAEGVEAWYRHPDSDFLQGDE 518
>gi|228475068|ref|ZP_04059796.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
gi|418620557|ref|ZP_13183361.1| isoleucine--tRNA ligase [Staphylococcus hominis VCU122]
gi|228271053|gb|EEK12441.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
gi|374822687|gb|EHR86707.1| isoleucine--tRNA ligase [Staphylococcus hominis VCU122]
Length = 916
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 214/620 (34%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + E D +IWTTTPW+LP+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGTIDE---DAQFIIWTTTPWTLPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G ++A+ L E++ D D + +F G+ L+ + HP
Sbjct: 247 PDLKYGQYNVNGKKYVIAEALAESVSEALGWDKDTIQLEKEFTGKELEYVETQHPFI--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ G V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + G E
Sbjct: 305 RVSLVINGGHVTTDAGTGCVHTAPGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQ-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L + L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLTDKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +EE +F + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEETDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +E+G + W+ + LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELHFPADLYFEGSDQYRGWFNSSITTAVATREQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + + G D+ R WV++ V
Sbjct: 603 VIVPNQVVKQK-----------------------------GADIARLWVSS-TDYLADVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T S+ + VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 228/398 (57%), Gaps = 18/398 (4%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G FILHDGPPYANG H+GHA+NKI+KDI +R +QG YVPGWD
Sbjct: 37 YQKALEKNEGNQSFILHDGPPYANGNLHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FALE + QK +F+ GV D+ +N Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSIAEFREKCKEFALEQVELQKQDFKRLGVRGDF-NNPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFD 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ + E D +IWTTTPW+LP+N I +P L+Y +V G ++A+ L ES
Sbjct: 214 VKDSKGTIDE---DAQFIIWTTTPWTLPSNVAITVHPDLKYGQYNVNGKKYVIAEALAES 270
Query: 245 ----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L W T I++ +F G+ L+ + HP R ++ G V++ GTG VH A
Sbjct: 271 VSEALGWDKDT-IQLEKEFTGKELEYVETQHPFI--DRVSLVINGGHVTTDAGTGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ +PV++ + ++G ++ + G EG+ K L + L
Sbjct: 328 PGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTDKGALLK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 387 LDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKPVI +A+ QWF +++ + L +E +F + K + + I R W
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETDFKVDWGKTRIYNMIRDRGEW 451
Query: 1212 CISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
ISRQRVWGVP+PVFY +GD I+ E + H L +E+G + W+ + LL
Sbjct: 452 VISRQRVWGVPLPVFYAENGDIIMTKET-VNHVADLFEEYGSNVWFEREAKDLL 504
>gi|403515288|ref|YP_006656108.1| isoleucyl-tRNA ligase [Lactobacillus helveticus R0052]
gi|403080726|gb|AFR22304.1| isoleucyl-tRNA ligase [Lactobacillus helveticus R0052]
Length = 927
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 326/621 (52%), Gaps = 63/621 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V +VA L+ E + W D VV G ++ + HPI +
Sbjct: 248 PKFDYSVVQVGDKRYVVASGLLDKVAEEIGWD---DYKVVQTVKGADMEYMKAKHPIYDK 304
Query: 534 QRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ L+ GF V+ GTGLVH AP G+DDF + +P+ + + G Y+ D P
Sbjct: 305 E---SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQRYNLPIFSPVDAHGCYT-DEVPE 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L+G+ K V L + L + + HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 361 LKGMFYQDVDKLMVQKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIAPFRD 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
+ L +E+ +F+P K L + I R W ISRQR WGVP+P+FY D T IV +I+
Sbjct: 421 QILDQIEKASFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPESIE 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H + ++ G + W++ + ++LL + N TK DILD+WFDSG SWS V++
Sbjct: 481 HIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEK 540
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+G
Sbjct: 541 RDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGQAPYKQVLSQGFVLDDKGHKMSKSLG 600
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPT 879
NVIS +D+ KK+ G +++R WVA A + D
Sbjct: 601 NVISPNDVI---KKM--------------------------GAEIIRLWVAQADTTSDVA 631
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V +G IL S + +KIR++ RY+L + ++ R VD YM +L +
Sbjct: 632 VSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYDDLRSVDQYMEVKLNDLIK 689
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y +F + + + NF+ N+LSAFY KD LY + N AR S +++
Sbjct: 690 ECLAAYDKFDFTTVFKKVFNFISNDLSAFYLDFAKDVLYIEVENSHARRSMQTVIYDAAV 749
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++ L
Sbjct: 750 KLAKILTPILPHTMEEIWGFL 770
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 215/385 (55%), Gaps = 20/385 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + +A E + Q +F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKTMDRAKYRELCRQYAEEQVQKQMTDFKRLGVMADWDH-PYITLQH 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++ +
Sbjct: 158 DFEAQEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFPVTD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV----E 243
+ D + +IWTTTPW++PAN+ I NP +YSV V +VA L+ E
Sbjct: 217 GKGII--DPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKRYVVASGLLDKVAE 274
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPA 302
+ W D +VV G ++ + HPI ++ L+ GF V+ GTGLVH AP
Sbjct: 275 EIGW---DDYKVVQTVKGADMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-E 361
G+DDF + +P+ + + G Y+ D P L+G+ K V L + L +
Sbjct: 329 FGEDDFNVGQRYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAGALLKLK 387
Query: 362 NYQHSYPYDWRTKKPVILKASQQWF 386
+ HSYP+DWRTKKPVI +A+ QWF
Sbjct: 388 VFTHSYPHDWRTKKPVIFRATTQWF 412
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 90/171 (52%), Gaps = 8/171 (4%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHS 1153
F V NL + G Y+ D P L+G+ K V L + L + + HS
Sbjct: 334 FNVGQRYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAGALLKLKVFTHS 392
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YP+DWRTKKPVI +A+ QWF + + L +E +F+P K L + I R W I
Sbjct: 393 YPHDWRTKKPVIFRATTQWFASIAPFRDQILDQIEKASFIPSWGKTRLYNMIKDRGDWVI 452
Query: 1214 SRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQR WGVP+P+FY D T IV +I+H + ++ G + W++ ++LL
Sbjct: 453 SRQRAWGVPLPIFYAEDGTPIVTPESIEHIAKIFEKEGSNAWYTHTAKELL 503
>gi|420211915|ref|ZP_14717271.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM001]
gi|394280425|gb|EJE24706.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM001]
Length = 916
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGHKYIVAQALSEAVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 230/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EAVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|418606287|ref|ZP_13169575.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU057]
gi|420169737|ref|ZP_14676315.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM070]
gi|374408680|gb|EHQ79492.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU057]
gi|394243037|gb|EJD88411.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM070]
Length = 852
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 127 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 182
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 183 PELNYGQYNVNGHKYIVAQALSEAVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 240
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 241 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 299
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 300 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 359
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 360 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 418
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 419 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 478
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 479 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 538
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 539 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 568
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 569 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 628
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 629 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 688
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 689 TKLLAPILVHTAEEVWSHTP 708
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 212/370 (57%), Gaps = 18/370 (4%)
Query: 36 IGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSKD---KLLSPLDIRKK 92
+GHA+NKI+KD +R +QG YVPGWD HGLPIE +A+T K K +S + R+K
Sbjct: 1 MGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKKMSVAEFREK 59
Query: 93 AKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKP 152
K FAL+ I+ QK +F+ GV D+ +N Y T EY Q+ F + + IY+ KP
Sbjct: 60 CKEFALKQIDIQKKDFKRLGVRGDF-NNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 118
Query: 153 VYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLP 212
VYWSPSS ++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P
Sbjct: 119 VYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIP 174
Query: 213 ANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTFQTDIEVVCDFPGQYLQDIT 268
+N I +P L Y +V G IVA+ L E+L W + I++ +F G+ L+ +
Sbjct: 175 SNVAITVHPELNYGQYNVNGHKYIVAQALSEAVAEALGWD-KDSIQLEKEFTGKELEFVE 233
Query: 269 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 328
HP R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G +
Sbjct: 234 AQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVF 291
Query: 329 SPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFI 387
+ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF
Sbjct: 292 TEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFA 350
Query: 388 DTERIKPEAL 397
+++ + L
Sbjct: 351 SINKVRQDIL 360
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 285 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 343
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 344 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 403
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 404 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 440
>gi|189218385|ref|YP_001939026.1| Isoleucyl-tRNA synthetase [Methylacidiphilum infernorum V4]
gi|259511509|sp|B3DYQ6.1|SYI_METI4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|189185243|gb|ACD82428.1| Isoleucyl-tRNA synthetase [Methylacidiphilum infernorum V4]
Length = 907
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/610 (35%), Positives = 320/610 (52%), Gaps = 51/610 (8%)
Query: 418 TALAESELEY-KPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
TALAE+E+EY K + I+ + + ++ L T L WTTTPW+LPAN +A
Sbjct: 190 TALAEAEIEYQKKEDIAIYVEFPVGEEELKKAGLPQGTSF--LAWTTTPWTLPANLALAV 247
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFP-GQYLQDITYIHPINKEQR 535
+P L Y + V G IVA L E++ F + V+ FP GQ L+ + Y HP+ R
Sbjct: 248 SPDLSYELRQVGGKKFIVAGKLAESIP-GFSHSV-VLLSFPSGQNLEGLKYNHPLLP--R 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG-PGLE 594
+ + A FVS G+G+VH AP HG +D+ L + + V + + +QG+++ G +
Sbjct: 304 EGVVYTADFVSGETGSGIVHIAPGHGMEDYQLGMVHGLEVYSPVDDQGRFTKQCGIEKIV 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
GL++ L E +LW + Y H YP+ WR+K P+I ++ QWFI E K A
Sbjct: 364 GLSVFEANSILCAMLKEKGLLWAKYPYVHDYPFCWRSKTPIIFRSVPQWFIAIEAFKSLA 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHF 712
L +E VN++P + ++ + R WCISRQR WGVPIP FY I++ + I+ F
Sbjct: 424 LKEIERVNWIPSRGENRIKGAVESRKDWCISRQRYWGVPIPAFYKKSGEAILDPSIIRRF 483
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTSDV--NSNVTKSNDILDIWFDSGISWSHVLK---DKP 767
++E G D W+ L ++L + + ++ K D LD+W DSG S VLK + P
Sbjct: 484 ADKVEEEGTDLWFRLESKELCQLLGLAPSEDLVKGLDTLDVWIDSGSSHYSVLKPRGEDP 543
Query: 768 AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHD 827
A +Y+EG DQ GWF SSLL SVA K AP+++V HGFVVD G K+SKS G A D
Sbjct: 544 ADLYLEGSDQHRGWFQSSLLLSVASKGKAPYKSVLTHGFVVDLDGKKLSKSSG----ARD 599
Query: 828 ITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNIL 887
+++ ++ YG D+LR WVA+ + VP K I
Sbjct: 600 LSE--------------------------QIQTYGADLLRLWVASEEYAE-DVPFSKEIF 632
Query: 888 NSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGE 943
+ D + IR+SLR LLG LH+ + S+ R +D Y + + Y
Sbjct: 633 SRLSDSYRLIRNSLRILLGNLHDFNPQEQSLPDDRLREIDRYFELCVNKLVKKTKAFYEN 692
Query: 944 FQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAP 1003
+++++ + L F ELS+FY ++KDRLYCD N +R S L+ F L++ +AP
Sbjct: 693 YEFSQVYQALTRFCSVELSSFYIDILKDRLYCDGQNWLSRRSAQTVLYRTFECLVKLLAP 752
Query: 1004 IMPHLAEEVY 1013
I+P EE +
Sbjct: 753 ILPFTTEEAW 762
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 224/397 (56%), Gaps = 12/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++YS E P+FILHDGPP+ANG H+G +NKILKDI L+S + G + Y+PGW
Sbjct: 35 KVYSTLLEKRKNCPQFILHDGPPFANGKAHMGSGLNKILKDIVLKSRNMLGFQCPYIPGW 94
Query: 66 DCHGLPIELKAITSKDKLLS-PLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE K ++ L + PL IR K K +A I QK +F G+L W+ N Y T
Sbjct: 95 DCHGLPIEHKVMSEYPALAADPLSIRNKCKEYARYWIEIQKEQFRRLGILGSWD-NPYIT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEY-KPDHVSKSIYLKI 183
D Y +L F L ++ ++YR L+PV+WS RTALAE+E+EY K + ++ + +
Sbjct: 154 MDPGYEAAELRLFAELVEKKWVYRGLRPVFWSVGCRTALAEAEIEYQKKEDIAIYVEFPV 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
++ L T L WTTTPW+LPAN +A +P L Y + V G IVA L E
Sbjct: 214 GEEELKKAGLPQGTSF--LAWTTTPWTLPANLALAVSPDLSYELRQVGGKKFIVAGKLAE 271
Query: 244 SLKWTFQTDIEVVCDFP-GQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ F + V+ FP GQ L+ + Y HP+ R+ + A FVS G+G+VH AP
Sbjct: 272 SIP-GFSHSV-VLLSFPSGQNLEGLKYNHPLLP--REGVVYTADFVSGETGSGIVHIAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAG-PGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG +D+ L + + V + + +QG+++ G + GL++ L E +LW +
Sbjct: 328 HGMEDYQLGMVHGLEVYSPVDDQGRFTKQCGIEKIVGLSVFEANSILCAMLKEKGLLWAK 387
Query: 362 N-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y H YP+ WR+K P+I ++ QWFI E K AL
Sbjct: 388 YPYVHDYPFCWRSKTPIIFRSVPQWFIAIEAFKSLAL 424
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAG-PGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVIL 1166
+ +QG+++ G + GL++ L E +LW + Y H YP+ WR+K P+I
Sbjct: 347 VDDQGRFTKQCGIEKIVGLSVFEANSILCAMLKEKGLLWAKYPYVHDYPFCWRSKTPIIF 406
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
++ QWFI E K AL +E VN++P + ++ + R WCISRQR WGVPIP F
Sbjct: 407 RSVPQWFIAIEAFKSLALKEIERVNWIPSRGENRIKGAVESRKDWCISRQRYWGVPIPAF 466
Query: 1227 Y-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQL 1262
Y I++ + I+ F ++E G D W+ L ++L
Sbjct: 467 YKKSGEAILDPSIIRRFADKVEEEGTDLWFRLESKEL 503
>gi|89098730|ref|ZP_01171612.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
gi|89086692|gb|EAR65811.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
Length = 923
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 224/621 (36%), Positives = 327/621 (52%), Gaps = 56/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ K+ L + D+ +IWTTTPW++PAN I+ +
Sbjct: 191 SALAEAEIEYQ-DKRSPSIYVGFKVKDGKGVLDQ---DVQIVIWTTTPWTIPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKW-TFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L Y VA G+ +VA+ L+E++ T D VV G L++I HP+ RD
Sbjct: 247 PDLNYVVAEAGGSKYLVAEELLESVAGETGWEDPAVVKTVKGSELENILASHPLYG--RD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG+DDF + + VL + ++G + +A G EGL
Sbjct: 305 SLVMLGDHVTVDAGTGCVHTAPGHGEDDFYVGQKYGLEVLCPVDDKGLMTNEA-EGFEGL 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 364 FYDEANKPITEALKEKGALLGLKFITHSYPHDWRTKKPVIFRATAQWFASIKDFRNELLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++E +VP + L + + R WCISRQR WGVPIPVFY +GD+II +E I H
Sbjct: 424 AVKETKWVPAWGETRLFNMVRDRGDWCISRQRAWGVPIPVFYAENGDSIITDE-TIDHVS 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 483 ALFREHGSNIWFEKEAKELLPEGFTHPGSPNGKFTKETDIMDVWFDSGSSHQAVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL TSVA+ AP++ V HGF +D +G KMSKS+GNV+
Sbjct: 543 LQRPADLYLEGSDQYRGWFNSSLSTSVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVV 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D+LR WVA+ V +
Sbjct: 603 -----------VPA------------------KVMNQLGADILRLWVAS-VDYQADVRVS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG L + + ++ R VD +ML +L + +
Sbjct: 633 DPILKQVAEVYRKIRNTFRFLLGNLADFNPEKDAVVFENLREVDQFMLVKLNKLVKNVKE 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +++A + NF +LS+FY KD LY ++ + R + L+ L +
Sbjct: 693 AYDRYEFAGIYHAINNFCTLDLSSFYLDFAKDVLYIEAEDNADRRAIQTVLYESLVALAK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQ 1020
API+ H A+EV+S +P+ +
Sbjct: 753 LTAPILSHTADEVWSFIPAAK 773
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 232/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGWD
Sbjct: 36 IYEKVQEHTKGRPMFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K ++ + RK + +A E +++Q+++F+ GV DWE N Y
Sbjct: 96 THGLPIE-QALTNKGVKRKEMTVAEFRKLCEEYAYEQVDSQRSQFKRLGVRGDWE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T +Y Q+ F ++ K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 154 TLQPQYEAQQIKVFGDMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKRSPSIYVGF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
K+ L + D+ +IWTTTPW++PAN I+ +P L Y VA G+ +VA+ L+E
Sbjct: 213 KVKDGKGVLDQ---DVQIVIWTTTPWTIPANLGISVHPDLNYVVAEAGGSKYLVAEELLE 269
Query: 244 SLKW-TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
S+ T D VV G L++I HP+ RD ++ V+ GTG VH AP
Sbjct: 270 SVAGETGWEDPAVVKTVKGSELENILASHPLYG--RDSLVMLGDHVTVDAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF + + VL + ++G + +A G EGL K L E L
Sbjct: 328 HGEDDFYVGQKYGLEVLCPVDDKGLMTNEA-EGFEGLFYDEANKPITEALKEKGALLGLK 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 387 FITHSYPHDWRTKKPVIFRATAQWFASIKDFRNELL 422
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 11/160 (6%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVI 1165
L+TN+ + G EGL K L E L + HSYP+DWRTKKPVI
Sbjct: 351 GLMTNEAE-------GFEGLFYDEANKPITEALKEKGALLGLKFITHSYPHDWRTKKPVI 403
Query: 1166 LKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
+A+ QWF + + E L ++ +VP + L + + R WCISRQR WGVPIPV
Sbjct: 404 FRATAQWFASIKDFRNELLEAVKETKWVPAWGETRLFNMVRDRGDWCISRQRAWGVPIPV 463
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY +GD+II +E I H L EHG + W+ ++LL
Sbjct: 464 FYAENGDSIITDE-TIDHVSALFREHGSNIWFEKEAKELL 502
>gi|422422735|ref|ZP_16499688.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
gi|313637043|gb|EFS02610.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
Length = 921
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ +LE T++ +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKKSASIFVTFKVTDGKG-VLEPGTNI--VIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ L K F+ D ++ G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLAGLREKLGFE-DATILKTVRGSELDCVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 IFYDTANKMVTEKLEEVGALLKLEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 EAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TISHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SDLFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ +P+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGESPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T +S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + + R + + L
Sbjct: 692 DSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAADSKDRRAMQTVFYESVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 225/398 (56%), Gaps = 16/398 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNADRPSYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKKSASIFVT 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ +LE T++ +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKG-VLEPGTNI--VIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L K F+ D ++ G L + HP RD ++ ++ GTG VH A
Sbjct: 269 AGLREKLGFE-DATILKTVRGSELDCVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEA-PGFEGIFYDTANKMVTEKLEEVGALLK 384
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 LEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLL 422
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L E HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGIFYDTANKMVTEKLEEVGALLKLEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ VN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATSQWFASIDAFRDDLLEAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TISHISDLFREHGSNVWFERDVKDLL 502
>gi|429864032|gb|ELA38417.1| isoleucyl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
Length = 913
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 219/618 (35%), Positives = 321/618 (51%), Gaps = 71/618 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+ELEY +H+S + Y++ + PA L + L+A+IWTTTPW+LPAN+ IA +
Sbjct: 189 TALAEAELEYNENHVSTAAYVRYPIIDGPA-LPGFSGQLYAIIWTTTPWTLPANKAIAIH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID---VVCDFPGQYLQDITYIHPINKEQ 534
LEY+V +V G+ + A +E +K F TD + +V G L+ + Y + + Q
Sbjct: 248 DDLEYAVIAVNGSAYLTAVTRLEAVKALF-TDAEPEVIVPSIKGSELRGLKYHNRLQGVQ 306
Query: 535 RDLK-LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG- 592
+ ++ A FVS+ GTGLVH AP HG +D+ A I I ++G ++ +A P
Sbjct: 307 STPQPIIHADFVSADSGTGLVHIAPGHGFEDYEACAALGIDAFAPIDDEGNFTSEAFPDA 366
Query: 593 ----LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
+ +IL G VL L+E DVL Y+H YPYDWRTK+PV+++++ QWF D +
Sbjct: 367 PEKLTQSSSILKGGSKAVLALIEDDVLQAAKYKHKYPYDWRTKQPVVMRSTAQWFADVDS 426
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 707
IK +A+ L++V FVP S + L + R WCISRQR WGVPIP YD + +V E
Sbjct: 427 IKDDAITALKDVKFVPASGRNRLESFVVGRSEWCISRQRAWGVPIPALYDANGDAVVTEE 486
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
++ H ++I + G D G SW+ +
Sbjct: 487 SVDHIISVIQKRGIDA-------------------------------CGSSWTESVGQ-- 513
Query: 768 AHVYMEGMDQINGWFMSSLLTSVALKHT-------APFRNVFLHGFVVDEKGAKMSKSVG 820
A VY+EG DQ GWF SSLL+ VA + +PF+ + HGF +D KG KMSKS+G
Sbjct: 514 ADVYLEGSDQHRGWFQSSLLSYVAAQRAEGETQPKSPFKTLITHGFTLDAKGKKMSKSLG 573
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA-SKDPT 879
N I+ +I G P + V A + A G D +R W A+ +KD
Sbjct: 574 NTITPGEIMDGTLLPPLKLRGKAKVAGAGPTYE------ALGPDGIRLWAASSEYTKD-- 625
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDT 939
V IG+N+L S + K R+ ++ LLG +H + + + + +D L +L + +
Sbjct: 626 VAIGQNVLKSVHIQLVKYRTIIKMLLGSMHESARTAPTTT--LDHIALVQLKDVMEEVQK 683
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y ++ RA + +V N+LSAFY +KDRLYC G L IFH LR
Sbjct: 684 AYASHEFYRAFSAINRWVSNDLSAFYLEAMKDRLYCGDGGG--------VLEPIFHGFLR 735
Query: 1000 TVAPIMPHLAEEVYSHLP 1017
++P+ P L EE + H P
Sbjct: 736 MLSPMTPLLVEEAWDHRP 753
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/404 (43%), Positives = 251/404 (62%), Gaps = 14/404 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+ Y WQ A + +P F LHDGPPYANG+ H+GHA+NK+LKD+ R + QG RV Y PGW
Sbjct: 35 DFYKWQ-SANDSRPGFTLHDGPPYANGSLHVGHALNKVLKDMISRVKVQQGYRVRYRPGW 93
Query: 66 DCHGLPIELKAI-TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIELKA+ TS K ++ ++IRK A+ A +T+ Q F S+ V+ DW+ + T
Sbjct: 94 DCHGLPIELKAVGTSGGKDMTAVEIRKAARQLASKTVLEQMEGFRSYAVMGDWDAR-WTT 152
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D ++ QL F + ++ IYR KPVYWSPSSRTALAE+ELEY +HVS + Y++
Sbjct: 153 MDPDFEIRQLRLFQQMVRRGLIYRKNKPVYWSPSSRTALAEAELEYNENHVSTAAYVRYP 212
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ PA L + L+A+IWTTTPW+LPAN+ IA + LEY+V +V G+ + A +E+
Sbjct: 213 IIDGPA-LPGFSGQLYAIIWTTTPWTLPANKAIAIHDDLEYAVIAVNGSAYLTAVTRLEA 271
Query: 245 LKWTFQTDIE---VVCDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGLVHCA 300
+K F TD E +V G L+ + Y + + Q + ++ A FVS+ GTGLVH A
Sbjct: 272 VKALF-TDAEPEVIVPSIKGSELRGLKYHNRLQGVQSTPQPIIHADFVSADSGTGLVHIA 330
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-----LEGLNILGDGKDQVLHLVEP 355
P HG +D+ A I I ++G ++ +A P + +IL G VL L+E
Sbjct: 331 PGHGFEDYEACAALGIDAFAPIDDEGNFTSEAFPDAPEKLTQSSSILKGGSKAVLALIED 390
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
DVL Y+H YPYDWRTK+PV+++++ QWF D + IK +A+
Sbjct: 391 DVLQAAKYKHKYPYDWRTKQPVVMRSTAQWFADVDSIKDDAITA 434
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 6/150 (4%)
Query: 1109 ITNQGKYSPDAGPG-----LEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKP 1163
I ++G ++ +A P + +IL G VL L+E DVL Y+H YPYDWRTK+P
Sbjct: 352 IDDEGNFTSEAFPDAPEKLTQSSSILKGGSKAVLALIEDDVLQAAKYKHKYPYDWRTKQP 411
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
V+++++ QWF D + IK +A+ L+ V FVP S + L + R WCISRQR WGVPI
Sbjct: 412 VVMRSTAQWFADVDSIKDDAITALKDVKFVPASGRNRLESFVVGRSEWCISRQRAWGVPI 471
Query: 1224 PVFYDGD-TIIVNEANIKHFCTLIDEHGPD 1252
P YD + +V E ++ H ++I + G D
Sbjct: 472 PALYDANGDAVVTEESVDHIISVIQKRGID 501
>gi|347727088|gb|AEP19902.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. N39]
Length = 908
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 226/624 (36%), Positives = 324/624 (51%), Gaps = 62/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S +IY+ ++ V + TD H +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYY-DKKSPAIYVAFQV--VDGKDVLQTTD-HFVIWTTTPWTIPANLGIAVS 246
Query: 478 PALEYSVASVKGANVIVAKCLVEN----LKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
L Y+ G IVA+ LVE LKWT D V + G+ + +T HP+
Sbjct: 247 DELTYTRIEHDGKGYIVAESLVEEVTTALKWT---DYTVSGSWNGREFEYMTAQHPLYDR 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
L+ G ++ TGLVH AP HG+DD+ + A + VL + ++G Y D PG
Sbjct: 304 T---SLVMIGDHVTADATGLVHTAPGHGEDDYRVGQAYGLDVLCPVDDRG-YMTDEAPGF 359
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K + L E L + +HSYP+DWRTKKPVI +A+ QWF + + +
Sbjct: 360 EGLFYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRAD 419
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +EEVN+VPE L + + R W ISRQR WGVPIP+FY DG II NE I+
Sbjct: 420 MLREIEEVNWVPEWGMTRLYNMVRDRGDWVISRQRAWGVPIPIFYAEDGTEIITNE-TIE 478
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ + LL + + N K DI+D+WFDSG S + VL+
Sbjct: 479 HIANLFHEHGSNVWYEREAKDLLPAGFTHPNSPNGEFRKELDIMDVWFDSGSSHAGVLEQ 538
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL T+VA AP+RNV HGFV+D G KMSKS+G
Sbjct: 539 RDNLRRPADLYLEGSDQYRGWFNSSLSTAVATTGKAPYRNVLSHGFVLDGDGRKMSKSLG 598
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N I+ +D+ + YG +++R WV++ V
Sbjct: 599 NTIAPNDLVK-----------------------------QYGAEIVRLWVSS-VDYQSDV 628
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYV---DVYMLKRLCEFQNTM 937
+ + +KIR++LR+LLG L+ S + D +M +L + Q +
Sbjct: 629 RASHDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFEDMPEADRFMATKLKQLQAKV 688
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F + + NF VNELS+FY KD LY + + R + +++ L
Sbjct: 689 VKAYDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIEREDDARRRAVQTVMYDTVVTL 748
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQG 1021
+ +API+PH A+EV+ +P++Q
Sbjct: 749 TKLLAPILPHTADEVWQEVPAKQA 772
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/399 (41%), Positives = 234/399 (58%), Gaps = 19/399 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+ +E GKP++ILHDGPPYANG H+GHA+NK+LKDI +R L G + +PGW
Sbjct: 35 DLYNRVQEKNAGKPQYILHDGPPYANGDIHMGHALNKVLKDIIVRFKSLNGYQSPMIPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L+ K ++ + R+K +A+E +N+Q+ +F+ G+LAD++ N Y
Sbjct: 95 DTHGLPIENALQKAGVNRKEMTVAEFREKCAAYAMEQVNSQREQFKRLGLLADFD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + ++ YIY+ KPVYWSPSS +ALAE+E+EY D S +IY+
Sbjct: 154 TLLPEYEAAQIRLFGTMAEKGYIYKGKKPVYWSPSSESALAEAEIEYY-DKKSPAIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
++ V + TD H +IWTTTPW++PAN IA + L Y+ G IVA+ LVE
Sbjct: 213 QV--VDGKDVLQTTD-HFVIWTTTPWTIPANLGIAVSDELTYTRIEHDGKGYIVAESLVE 269
Query: 244 ----SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
+LKW TD V + G+ + +T HP+ L+ G ++ TGLVH
Sbjct: 270 EVTTALKW---TDYTVSGSWNGREFEYMTAQHPLYDRT---SLVMIGDHVTADATGLVHT 323
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DD+ + A + VL + ++G Y D PG EGL K + L E L
Sbjct: 324 APGHGEDDYRVGQAYGLDVLCPVDDRG-YMTDEAPGFEGLFYEDANKQIGMKLEENGYLL 382
Query: 360 TENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 383 NLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRADML 421
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
Query: 1115 YSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWF 1173
Y D PG EGL K + L E L + +HSYP+DWRTKKPVI +A+ QWF
Sbjct: 351 YMTDEAPGFEGLFYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVIFRATPQWF 410
Query: 1174 IDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDT 1231
+ + + L +E VN+VPE L + + R W ISRQR WGVPIP+FY DG
Sbjct: 411 ASIKDFRADMLREIEEVNWVPEWGMTRLYNMVRDRGDWVISRQRAWGVPIPIFYAEDGTE 470
Query: 1232 IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
II NE I+H L EHG + W+ + LL
Sbjct: 471 IITNE-TIEHIANLFHEHGSNVWYEREAKDLL 501
>gi|422419644|ref|ZP_16496599.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
gi|313632514|gb|EFR99522.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
Length = 921
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 326/618 (52%), Gaps = 58/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SI++ K+ +LE T++ +IWTTTPW++PAN I N
Sbjct: 191 SALAEAEIEYQ-DKKSASIFVTFKVTDGKG-VLEPGTNI--VIWTTTPWTIPANMGITVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P L+Y V G +VA+ L+ L K F+ D ++ G L + HP R
Sbjct: 247 PDLDYVVIESAGEKYVVAEALLAGLREKLGFE-DATLLKTVRGSELDRVVTKHPFY--DR 303
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D ++ ++ GTG VH AP HG+DDFL+ + VL + ++G ++ +A PG EG
Sbjct: 304 DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEA-PGFEG 362
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K L E L E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 IFYDTANKMVTEKLEEVGALLKLEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++ VN+ P + L + + R W ISRQR WGVP+P+FY +G+ II +E I H
Sbjct: 423 EAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFYAENGEAIITDE-TISHI 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK--- 764
L EHG + W+ V+ LL + N TK DI+D+WFDSG S VL
Sbjct: 482 SDLFREHGSNVWFERDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARP 541
Query: 765 --DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
+PA +YMEG DQ GWF SSL T+VA+ +P+RNV HGF +D +G KMSKS+GN
Sbjct: 542 ELSRPADLYMEGSDQYRGWFNSSLTTAVAITGESPYRNVLSHGFALDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ LP G VI K+L G D++R WVA+ V +
Sbjct: 602 L-----------LP------GKVI---------KQL---GADIVRLWVAS-VDYQADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
IL + +KIR+++R+LLG +++ +T +S R VD YML +L + +
Sbjct: 632 SDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYENLREVDKYMLIKLNDLVKNVK 691
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F+++ + NF ELS FY KD +Y ++ + + R + + L
Sbjct: 692 DSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAADSKDRRAMQTVFYESVVTLT 751
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ +API+PH EEV++ L
Sbjct: 752 KLLAPILPHTTEEVWNSL 769
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 225/398 (56%), Gaps = 16/398 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E +P +ILHDGPPYANG H+GHA+NK +KDI +R + G R YVPGW
Sbjct: 35 KLYEKIQEKNADRPSYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE AI K K +S + RK +A+ ++ Q+ F+ G+ DWE N Y
Sbjct: 95 DTHGLPIE-TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY+ D S SI++
Sbjct: 153 ITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQ-DKKSASIFVT 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ +LE T++ +IWTTTPW++PAN I NP L+Y V G +VA+ L+
Sbjct: 212 FKVTDGKG-VLEPGTNI--VIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALL 268
Query: 243 ESL--KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L K F+ D ++ G L + HP RD ++ ++ GTG VH A
Sbjct: 269 AGLREKLGFE-DATLLKTVRGSELDRVVTKHPFY--DRDSLVMNGEHATAEAGTGAVHTA 325
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDFL+ + VL + ++G ++ +A PG EG+ K L E L
Sbjct: 326 PGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEA-PGFEGIFYDTANKMVTEKLEEVGALLK 384
Query: 361 -ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 385 LEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLL 422
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ ++G ++ +A PG EG+ K L E L E HSYP+DWRTKKPVI +
Sbjct: 347 LDDRGVFTEEA-PGFEGIFYDTANKMVTEKLEEVGALLKLEFITHSYPHDWRTKKPVIFR 405
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ VN+ P + L + + R W ISRQR WGVP+P+FY
Sbjct: 406 ATSQWFASIDAFRDDLLEAVKSVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPLPIFY 465
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ II +E I H L EHG + W+ V+ LL
Sbjct: 466 AENGEAIITDE-TISHISDLFREHGSNVWFERDVKDLL 502
>gi|262377098|ref|ZP_06070323.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262307836|gb|EEY88974.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 948
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 230/675 (34%), Positives = 352/675 (52%), Gaps = 81/675 (12%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + +++G I + G H PG ++LAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSLGAI-AKAG--HIEPGLKPVNWCLDCGSSLAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL-LEGATDLHALIWTTTPWSLPANQFIAFNPALEY----SVASVKG 489
+ + L + A L ++ A +IWTTTPW++PANQ +A + LEY + A K
Sbjct: 221 VGFTVVDLADLSARLGVDVADRTDIVIWTTTPWTMPANQAVALHAELEYQLVKATAEDKA 280
Query: 490 A-NVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSS 547
A N I+AK LVE+ + T +V+ +F G L+ + HP+ E R + ++ V+
Sbjct: 281 AQNFILAKSLVESATQRYGFTAFEVLAEFTGAKLEKLILQHPLIAE-RQVPVILGEHVTD 339
Query: 548 SKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL 607
+ GTG VH AP HG DD+ + L + V N + G Y P + P G +I +
Sbjct: 340 ASGTGAVHTAPGHGVDDYKVGLQYNLKVENPVGGNGVYLPTS-PIFPGEHIYKANPKIIA 398
Query: 608 HLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNFV 663
L E LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL +E +++FV
Sbjct: 399 ALTEATKLWAHVVIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQNALNAIENDISFV 458
Query: 664 PESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN------IKHFCTLID 717
P+ K ++ I RP WCISRQR WGVPIP F DT NE + I+ LI+
Sbjct: 459 PDWGKNRIQAMIEGRPDWCISRQRTWGVPIPFFVHKDT---NELHPRTPELIEEVAKLIE 515
Query: 718 EHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYM 772
+ G D W++ + + + N + D LD+WFDSG + VL+++ PA +Y+
Sbjct: 516 QEGIDGWYNRNASEFIGADAEQYNAVR--DTLDVWFDSGTTHYAVLREREELTDPADLYL 573
Query: 773 EGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGA 832
EG DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GNV
Sbjct: 574 EGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSIGNV---------- 623
Query: 833 KKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQD 892
I+ DI + G D LR+W+A+ A + GK I + + D
Sbjct: 624 -------------ITPQDIIKD------MGADGLRFWIAS-ADYRYEMTAGKEIFSRASD 663
Query: 893 DVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYAR 948
++IR++LR+LL L+ ST ++ +D Y+L+R E Q T+ Y + +
Sbjct: 664 GYRRIRNTLRFLLANLNGFKPSTDALPVDQLIALDQYILQRASEVQETIKKAYEDMNFHI 723
Query: 949 ASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHL 1008
+ L NF +N+L FY ++KDR Y + +AR S L+++ +R ++PI+
Sbjct: 724 VTTALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSAQTALYHLVQAFVRWMSPILSFT 783
Query: 1009 AEEVYSHLPSRQGTF 1023
A+E + +P + +
Sbjct: 784 AQEAWPLIPEQSEKY 798
Score = 249 bits (636), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 224/407 (55%), Gaps = 20/407 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y RE+ GK +++LHDGPPYANG H+GHAVNK+LKDI ++S ++ G YVPGWD
Sbjct: 46 IYQQIRESRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVMDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W ++LAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSLGAIAKAGHIEPGLKPVNWCLDCGSSLAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL-LEGATDLHALIWTTTPWSLPANQFIAFNPALEY----SVASVKGA-N 234
+ L + A L ++ A +IWTTTPW++PANQ +A + LEY + A K A N
Sbjct: 224 TVVDLADLSARLGVDVADRTDIVIWTTTPWTMPANQAVALHAELEYQLVKATAEDKAAQN 283
Query: 235 VIVAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
I+AK LVES + T EV+ +F G L+ + HP+ E R + ++ V+ + G
Sbjct: 284 FILAKSLVESATQRYGFTAFEVLAEFTGAKLEKLILQHPLIAE-RQVPVILGEHVTDASG 342
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TG VH AP HG DD+ + L + V N + G Y P + P G +I + L
Sbjct: 343 TGAVHTAPGHGVDDYKVGLQYNLKVENPVGGNGVYLPTS-PIFPGEHIYKANPKIIAALT 401
Query: 354 EPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
E LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL
Sbjct: 402 EATKLWAHVVIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQNAL 448
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVI 1165
N + G Y P + P G +I + L E LW +HSYP+ WR K P+I
Sbjct: 369 NPVGGNGVYLPTS-PIFPGEHIYKANPKIIAALTEATKLWAHVVIKHSYPHCWRHKTPII 427
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E ++FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 428 FRATPQWFISMDAKGLRQNALNAIENDISFVPDWGKNRIQAMIEGRPDWCISRQRTWGVP 487
Query: 1223 IPVFYDGDTIIVNEAN------IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT NE + I+ LI++ G D W++ + + N +
Sbjct: 488 IPFFVHKDT---NELHPRTPELIEEVAKLIEQEGIDGWYNRNASEFIGADAEQYNAVR 542
>gi|387783871|ref|YP_006069954.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) (IleRS)
[Streptococcus salivarius JIM8777]
gi|338744753|emb|CCB95119.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) (IleRS)
[Streptococcus salivarius JIM8777]
Length = 932
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 213/641 (33%), Positives = 329/641 (51%), Gaps = 54/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G + +VA L+ +L F TD++V + G+ L I HP + E
Sbjct: 247 ADIEYVLVKPAGEDRKFVVASELLNSLSEKFGWTDVEVFQSYRGEELNQIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANNGVAPYKQLLSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + + + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDTTN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +T +++ R VD YM R + T+
Sbjct: 635 MDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVKTIRD 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ + L+NF+ ELSAFY KD +Y +S R ++I + +
Sbjct: 695 AYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
+ PI+PH AEE++S+L + +++G A
Sbjct: 755 LLTPILPHTAEEIWSYLEFETEDYVQLSELPEAEEFAGQDA 795
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 224/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G YVPG
Sbjct: 34 AKMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G + +VA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGEDRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD+EV + G+ L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVEVFQSYRGEELNQIVTEHPWDTEVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L +EHG WW + LL
Sbjct: 469 EDKTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|314936645|ref|ZP_07843992.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
gi|313655264|gb|EFS19009.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
Length = 916
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 214/620 (34%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + E D +IWTTTPW+LP+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGTIDE---DAQFIIWTTTPWTLPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G ++A+ L E++ D D + +F G+ L+ + HP
Sbjct: 247 PDLKYGQYNVNGKKYVIAEALAESVSEALGWDKDTIQLEKEFTGKELEYVETQHPFI--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ G V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + G E
Sbjct: 305 RVSLVINGGHVTTDAGTGCVHTAPGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQ-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L + L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLTDKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +EE +F + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEETDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +E+G + W+ + LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEEYGSNVWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELHFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + + G D+ R WV++ V
Sbjct: 603 VIVPNQVVKQK-----------------------------GADIARLWVSS-TDYLADVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T S+ + VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 272 bits (696), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 228/398 (57%), Gaps = 18/398 (4%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G FILHDGPPYANG H+GHA+NKI+KDI +R +QG YVPGWD
Sbjct: 37 YQKALEKNEGNQSFILHDGPPYANGNLHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FALE + QK +F+ GV D+ +N Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSIAEFREKCKEFALEQVELQKQDFKRLGVRGDF-NNPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFD 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ + E D +IWTTTPW+LP+N I +P L+Y +V G ++A+ L ES
Sbjct: 214 VKDSKGTIDE---DAQFIIWTTTPWTLPSNVAITVHPDLKYGQYNVNGKKYVIAEALAES 270
Query: 245 ----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L W T I++ +F G+ L+ + HP R ++ G V++ GTG VH A
Sbjct: 271 VSEALGWDKDT-IQLEKEFTGKELEYVETQHPFI--DRVSLVINGGHVTTDAGTGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ +PV++ + ++G ++ + G EG+ K L + L
Sbjct: 328 PGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTDKGALLK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 387 LDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKPVI +A+ QWF +++ + L +E +F + K + + I R W
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETDFKVDWGKTRIYNMIRDRGEW 451
Query: 1212 CISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
ISRQRVWGVP+PVFY +GD I+ E + H L +E+G + W+ + LL
Sbjct: 452 VISRQRVWGVPLPVFYAENGDIIMTKET-VNHVADLFEEYGSNVWFEREAKDLL 504
>gi|420202092|ref|ZP_14707687.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM018]
gi|394270065|gb|EJE14588.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM018]
Length = 916
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELNYGQYNVNGHKYIVAQALSEAVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 229/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELNYGQYNVNGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EAVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|312871879|ref|ZP_07731963.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
gi|312874401|ref|ZP_07734431.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
gi|311090013|gb|EFQ48427.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
gi|311092601|gb|EFQ50961.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
Length = 928
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/618 (34%), Positives = 331/618 (53%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + + + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDVLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNTMD 938
++IL + + +K+R+++R++L + ++ VD YM +L +
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSGVDQYMEVKLNKLLAECL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++ L
Sbjct: 693 DAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDFLVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++S+L
Sbjct: 753 KLLTPILPHTMEEIWSYL 770
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 225/394 (57%), Gaps = 16/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VPGWD HG
Sbjct: 39 QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H Y TF
Sbjct: 99 LPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-PYITFQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++ KL
Sbjct: 158 QFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFKL-- 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
+ + + + +IWTTTPW++PAN+ I NP +YS+ V +VA L+E +
Sbjct: 215 IDGKDVLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGLLEKVAQ 274
Query: 248 TFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQ 305
D VV F G ++ + HPI ++ L+ GF V+ GTGLVH AP G
Sbjct: 275 EIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHTAPGFGA 331
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +L + +
Sbjct: 332 DDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 390 THSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|433448685|ref|ZP_20411551.1| isoleucyl-tRNA synthetase [Weissella ceti NC36]
gi|429539612|gb|ELA07648.1| isoleucyl-tRNA synthetase [Weissella ceti NC36]
Length = 930
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 220/628 (35%), Positives = 320/628 (50%), Gaps = 59/628 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALA +E+EY D S S+ ++ L D + ++WTTTPW++PA+Q IA N
Sbjct: 191 SALAMAEIEYH-DVTSTSVSFSERVVDGKGVL---DNDTYFVVWTTTPWTIPASQAIAVN 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK 532
P EY V VK AN +VA + F + +++ G + +T HP
Sbjct: 247 PNFEYVV--VKPANSDKKFVVANARLATAAADFGWEEYEIIKTVKGSDIDRVTAQHPY-- 302
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R++ ++ V+ GTGLVH AP G+DDF A +PV+ + QGK + + G
Sbjct: 303 LDREVLVINGDHVTDEAGTGLVHTAPGFGEDDFYAAQKYDLPVIMNVDGQGKLTDETGED 362
Query: 593 LEGLNILGDGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G+ + + L E D L + HSYP+DWRTKKPVI +A QWF E +
Sbjct: 363 FAGVFYEDANEISLQKLTENDALVKAQEITHSYPFDWRTKKPVIYRAVPQWFASIEPFRQ 422
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
E L L++V F P KK L + I R W ISRQRVWGVP+P+FY D T I++ A I
Sbjct: 423 EILDSLDDVEFQPAWGKKRLGNMIRDRGDWVISRQRVWGVPLPIFYAEDGTPILDPALID 482
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG W+ +LL N N TK +DI+D+WFDSG S VLK+
Sbjct: 483 HVANLFAEHGSSIWFEKEAAELLPAGYSNEHSPNGIFTKESDIMDVWFDSGSSHEGVLKE 542
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA V +EG DQ GWF SSL+TSVA+ H AP++ V GF +D G KMSKS+G
Sbjct: 543 RSNLNFPADVVLEGSDQYRGWFNSSLITSVAVNHKAPYKRVISQGFALDGNGDKMSKSIG 602
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N I +I + G +++R WV + S V
Sbjct: 603 NTIVPEEIVKD-----------------------------MGAEIIRLWVTSVDSS-ADV 632
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
+ K IL + D +KIR+++R+LL + + + T +++ VD Y R EF
Sbjct: 633 RVSKEILAKTSDTYRKIRNTMRFLLSNVDDFNPETDAVAFADMTPVDQYFYARFNEFVRD 692
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y + + +++++NF+ +LSAFY KD LY ++ GE R S L+ I
Sbjct: 693 VKAAYDAYDFQAINKLIINFINVDLSAFYLDFAKDILYVEAPKGELRRSLQTVLYKILVD 752
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTFS 1024
+ + + PI+PH AEE++ ++P F+
Sbjct: 753 MNKMLLPILPHTAEEIFEYMPFETAEFA 780
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 216/395 (54%), Gaps = 18/395 (4%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP F+LHDGPPYANG HIGHA+NKI KDI +R + G +VPGWD HGL
Sbjct: 40 RQKLNEGKPWFMLHDGPPYANGNIHIGHALNKISKDILVRYKSMNGFNAPFVPGWDTHGL 99
Query: 71 PIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE L K + P+ RK A FA + + QK +F+ G+ ADW+ N Y T D+E
Sbjct: 100 PIEQQLTKAGKDRKKVGPVIWRKMAAEFADKQVKKQKDDFKRLGISADWD-NPYLTKDQE 158
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ ++ F + +D IYR KPV WS SS +ALA +E+EY D S S+ ++
Sbjct: 159 FEAAEVRVFGKMVARDLIYRGKKPVLWSWSSESALAMAEIEYH-DVTSTSVSFSERVVDG 217
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVAKCLVES 244
L D + ++WTTTPW++PA+Q IA NP EY V VK AN +VA + +
Sbjct: 218 KGVL---DNDTYFVVWTTTPWTIPASQAIAVNPNFEYVV--VKPANSDKKFVVANARLAT 272
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
F + E++ G + +T HP R++ ++ V+ GTGLVH AP
Sbjct: 273 AAADFGWEEYEIIKTVKGSDIDRVTAQHPY--LDREVLVINGDHVTDEAGTGLVHTAPGF 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-TEN 362
G+DDF A +PV+ + QGK + + G G+ + + L E D L +
Sbjct: 331 GEDDFYAAQKYDLPVIMNVDGQGKLTDETGEDFAGVFYEDANEISLQKLTENDALVKAQE 390
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A QWF E + E L
Sbjct: 391 ITHSYPFDWRTKKPVIYRAVPQWFASIEPFRQEIL 425
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILK 1167
+ QGK + + G G+ + + L E D L + HSYP+DWRTKKPVI +
Sbjct: 349 VDGQGKLTDETGEDFAGVFYEDANEISLQKLTENDALVKAQEITHSYPFDWRTKKPVIYR 408
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A QWF E + E L L+ V F P KK L + I R W ISRQRVWGVP+P+FY
Sbjct: 409 AVPQWFASIEPFRQEILDSLDDVEFQPAWGKKRLGNMIRDRGDWVISRQRVWGVPLPIFY 468
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I++ A I H L EHG W+ +LL
Sbjct: 469 AEDGTPILDPALIDHVANLFAEHGSSIWFEKEAAELL 505
>gi|323702140|ref|ZP_08113807.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323532827|gb|EGB22699.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 930
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 317/623 (50%), Gaps = 61/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY D S SIY+K + L + A+ +IWTTTPW+LPAN I+ +
Sbjct: 192 TALAEAEVEYA-DKTSPSIYVKFPVKDGKGVLPQDAS---VVIWTTTPWTLPANVAISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y VA V G V+VA+ L+E+ K D +++ G+ L+ +T HP R+
Sbjct: 248 PEFAYVVAMVNGEKVVVARELLESFKQAVGADNAEILAALKGEQLERVTCRHPFV--DRE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG++DF + +PVL + N+G+++ + G G
Sbjct: 306 SLVILGDHVTLDAGTGCVHTAPGHGEEDFEVGKKYNLPVLAPLDNKGRFTAEGGK-FAGQ 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
IL K V L E L + +H YP+ WR K P+ +A++QWF E + EAL
Sbjct: 365 FILDANKTIVEELKERGALMAHGHIKHQYPHCWRCKNPIFFRATEQWFASVEGFRQEALK 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ V +VP + + + + R WCISRQR WGVPIP+FY + I+ E I H
Sbjct: 425 AIRNVKWVPAWGEDRIYNMVEGRGDWCISRQRTWGVPIPIFYCNECGKEIITEETIAHIQ 484
Query: 714 TLIDEHGPDFWWSLSVEQLL------NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG D W++ +L+ + + K DI+D+WFDSG S VL K
Sbjct: 485 ELFKEHGSDIWFAKEANELVPPGLTCHHCGKGKDFRKETDIMDVWFDSGSSHLAVLDQKE 544
Query: 767 -------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
PA +Y+EG DQ GWF SSL TSVA+ P++ V HGFVVDEKG KMSKS+
Sbjct: 545 LWPDLHWPADLYLEGSDQHRGWFNSSLSTSVAVTSKPPYKAVLTHGFVVDEKGRKMSKSL 604
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ K + G D+LR WV++ A
Sbjct: 605 GNVVDP-----------------------------LKVINQMGADILRLWVSS-ADYRGD 634
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKR--LCEFQNTM 937
+ + +NIL + +KIR++ R+LLG L++ + + Y D+ L R L E +
Sbjct: 635 LSVSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVD-YADLPELDRVALMELHKLI 693
Query: 938 DTL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y +++ + NF V ++SAFY ++KDRLY R + L+ +
Sbjct: 694 KRVLAAYENYEFHVVYHAIHNFCVLDMSAFYLDIIKDRLYTAPPASRERRAAQTVLYEVL 753
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
L+R + P++ EE+Y H+P
Sbjct: 754 DALVRLLVPVLAFTTEEIYQHMP 776
Score = 289 bits (740), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 164/405 (40%), Positives = 230/405 (56%), Gaps = 15/405 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E GKP++ILHDGPPYANG H+GH +NK+LKD+ ++ + G YVPGW
Sbjct: 35 DLYHKVQEKNQGKPKYILHDGPPYANGHIHLGHTLNKVLKDMVVKYRSMSGYDAPYVPGW 94
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +AI S +SP++ R K K +AL Q EF+ GV DW+H Y
Sbjct: 95 DTHGLPIEQQAIKSLGINRHQVSPVEFRHKCKEYALNFAKIQSEEFQRLGVRGDWDHP-Y 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
+T +Y Q+ F + K+ YIY+ LKPVYW S TALAE+E+EY D S SIY+K
Sbjct: 154 YTLIPQYEATQIRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEVEYA-DKTSPSIYVK 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L + A+ +IWTTTPW+LPAN I+ +P Y VA V G V+VA+ L+
Sbjct: 213 FPVKDGKGVLPQDAS---VVIWTTTPWTLPANVAISVHPEFAYVVAMVNGEKVVVARELL 269
Query: 243 ESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES K D E++ G+ L+ +T HP R+ ++ V+ GTG VH AP
Sbjct: 270 ESFKQAVGADNAEILAALKGEQLERVTCRHPFV--DRESLVILGDHVTLDAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG++DF + +PVL + N+G+++ + G G IL K V L E L
Sbjct: 328 GHGEEDFEVGKKYNLPVLAPLDNKGRFTAEGGK-FAGQFILDANKTIVEELKERGALMAH 386
Query: 362 NY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+ +H YP+ WR K P+ +A++QWF E + EAL K + N+
Sbjct: 387 GHIKHQYPHCWRCKNPIFFRATEQWFASVEGFRQEAL--KAIRNV 429
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ N+G+++ + G G IL K V L E L + +H YP+ WR K P+ +
Sbjct: 348 LDNKGRFTAEGGK-FAGQFILDANKTIVEELKERGALMAHGHIKHQYPHCWRCKNPIFFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF E + EAL + V +VP + + + + R WCISRQR WGVPIP+FY
Sbjct: 407 ATEQWFASVEGFRQEALKAIRNVKWVPAWGEDRIYNMVEGRGDWCISRQRTWGVPIPIFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ I+ E I H L EHG D W++ +L+
Sbjct: 467 CNECGKEIITEETIAHIQELFKEHGSDIWFAKEANELV 504
>gi|297583961|ref|YP_003699741.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297142418|gb|ADH99175.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 920
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 222/622 (35%), Positives = 332/622 (53%), Gaps = 56/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ K+ L + D +IWTTTPW++PAN IA +
Sbjct: 192 SALAEAEIEYH-DKRSSSIYVAFKVVDGKGVL---SGDEEVVIWTTTPWTIPANLAIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P LEY KG ++VAK ++E+L+ + DV F G L+ I HP+ R+
Sbjct: 248 PDLEYVSVETKGRKLVVAKGMLEHLEAEGVVESGDVHQTFKGSDLEGILTKHPLY--DRE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG+DD+++ + +L + ++G ++ D P GL
Sbjct: 306 SLMVLGDHVTLDAGTGCVHTAPGHGEDDYIVGQKYGLDILCPVDDKGHFT-DEAPMFSGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L N+ HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 365 FYDAANKPITEALDERGALLKLNFFTHSYPHDWRTKKPVIYRATSQWFASIKDFREDLLK 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+E+V ++P+ + L + + R WCISRQR WGVPIPVFY DG+ II +E I H
Sbjct: 425 EIEDVQWMPKWGETRLYNMVRDRGDWCISRQRAWGVPIPVFYGEDGEPIITDE-TISHVS 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD--- 765
L EHG + W+ + LL + N TK DI+D+WFDSG S VL++
Sbjct: 484 DLFREHGSNIWFEKDAKDLLPEGFSSEHSPNGTFTKETDIMDVWFDSGSSHQAVLEERYD 543
Query: 766 --KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
+PA +Y+EG DQ GWF SSL T+VA+ AP++ V HGF +D +G KMSKS+GN +
Sbjct: 544 QVRPADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFTLDGEGKKMSKSLGNTV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA NV+ K+L G D+LR WVA+ V +
Sbjct: 604 -----------IPA------NVM---------KQL---GADILRLWVAS-VDYQADVRVS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
IL + +KIR++ R+LLG L S ++S +D YM+ +L + +
Sbjct: 634 DAILKQVAEVYRKIRNTFRFLLGNLDGFVPSEHAVSFDDLGELDQYMMLKLNDLITSTRK 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y E+Q+A + NF ELS+FY + KD LY + + E R +++ L++
Sbjct: 694 AYDEYQFAGIYNKVQNFCTVELSSFYMDISKDTLYVEHADHEDRRRIQTVMYHTLTSLVK 753
Query: 1000 TVAPIMPHLAEEVYSHLPSRQG 1021
++PI+ H ++EV++++P +
Sbjct: 754 LMSPILSHTSDEVWAYIPETEA 775
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 228/398 (57%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y ++ G+P F+LHDGPPYANG H+GHA+NKILKD +R + G YVPGW
Sbjct: 35 KIYEQVQKRTEGRPMFVLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGFHAPYVPGW 94
Query: 66 DCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
D HGLPIE A+T K K+ LS + RKK + +AL I+ Q+ +F+ GV DW+ N
Sbjct: 95 DTHGLPIE-TALTKKGKVDRKKLSVAEFRKKCEEYALGQIDRQREQFKQLGVRGDWD-NP 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T +Y Q+ F + K+ YIY+ KPVYWSPSS +ALAE+E+EY D S SIY+
Sbjct: 153 YVTLTHDYEAQQIRVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYH-DKRSSSIYV 211
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
K+ L + D +IWTTTPW++PAN IA +P LEY KG ++VAK +
Sbjct: 212 AFKVVDGKGVL---SGDEEVVIWTTTPWTIPANLAIAVHPDLEYVSVETKGRKLVVAKGM 268
Query: 242 VESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+E L+ + +V F G L+ I HP+ R+ ++ V+ GTG VH A
Sbjct: 269 LEHLEAEGVVESGDVHQTFKGSDLEGILTKHPLY--DRESLMVLGDHVTLDAGTGCVHTA 326
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ + +L + ++G ++ D P GL K L E L
Sbjct: 327 PGHGEDDYIVGQKYGLDILCPVDDKGHFT-DEAPMFSGLFYDAANKPITEALDERGALLK 385
Query: 361 EN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 386 LNFFTHSYPHDWRTKKPVIYRATSQWFASIKDFREDLL 423
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ D P GL K L E L N+ HSYP+DWRTKKPVI +
Sbjct: 348 VDDKGHFT-DEAPMFSGLFYDAANKPITEALDERGALLKLNFFTHSYPHDWRTKKPVIYR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L +E V ++P+ + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATSQWFASIKDFREDLLKEIEDVQWMPKWGETRLYNMVRDRGDWCISRQRAWGVPIPVFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
DG+ II +E I H L EHG + W+ + LL
Sbjct: 467 GEDGEPIITDE-TISHVSDLFREHGSNIWFEKDAKDLL 503
>gi|27467786|ref|NP_764423.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|417656667|ref|ZP_12306350.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU028]
gi|418609846|ref|ZP_13172980.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU065]
gi|418624916|ref|ZP_13187576.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU125]
gi|418664727|ref|ZP_13226193.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU081]
gi|419768667|ref|ZP_14294783.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-250]
gi|419772610|ref|ZP_14298641.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-K]
gi|420172806|ref|ZP_14679304.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM067]
gi|420209527|ref|ZP_14714964.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM003]
gi|39932185|sp|Q8CSX1.1|SYI_STAES RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|27315330|gb|AAO04465.1|AE016746_255 Ile-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|329736328|gb|EGG72600.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU028]
gi|374406182|gb|EHQ77085.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU065]
gi|374410173|gb|EHQ80934.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU081]
gi|374826181|gb|EHR90089.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU125]
gi|383359237|gb|EID36667.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-K]
gi|383359493|gb|EID36916.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-250]
gi|394241483|gb|EJD86897.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM067]
gi|394278974|gb|EJE23286.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM003]
Length = 916
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELNYGQYNVNGHKYIVAQALSEAVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 229/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELNYGQYNVNGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EAVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|384916004|ref|ZP_10016205.1| Isoleucyl-tRNA synthetase [Methylacidiphilum fumariolicum SolV]
gi|384526614|emb|CCG92076.1| Isoleucyl-tRNA synthetase [Methylacidiphilum fumariolicum SolV]
Length = 901
Score = 351 bits (901), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/610 (34%), Positives = 326/610 (53%), Gaps = 53/610 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH---LLEGATDLHALIWTTTPWSLPANQFI 474
TALAE+E+EY+ SIY++ +++ L +G++ L+WTTTPW+LPAN +
Sbjct: 190 TALAEAEVEYQKKE-DISIYVEFPVSEKSCKEGGLPQGSS---FLVWTTTPWTLPANLAL 245
Query: 475 AFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
A NP L Y + V +IV+ L + ++ + ++ G+ L+ + Y+HP+
Sbjct: 246 AVNPDLSYELRRVGSKYLIVSSKLAPTIPKLSESTL-ILSFSKGKKLEGLQYVHPLLP-- 302
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG-PGL 593
R ++ A FVS G+G+VH AP HG +D+ L + + + V + + + G+++ + G +
Sbjct: 303 RYGEVYAADFVSEETGSGIVHIAPGHGMEDYQLGVEKGLAVFSPVDDLGRFTKECGIEKI 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G N+ L E +LW + Y H YP+ WR+K P+I ++ QWFI+ ER K +
Sbjct: 363 VGRNVFDANPILCDMLEEKGLLWAKKLYVHDYPFCWRSKTPIIFRSVPQWFINIERFKIQ 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
AL +E+V ++P+ + ++ + R WCISRQR WG+PIPVFY DG+ ++ + I+
Sbjct: 423 ALHEIEKVQWIPKRGENRIKGAVESRKDWCISRQRYWGIPIPVFYRKDGEPLL-DPKIIR 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVL---KDKP 767
F +++E G D W+ L E+L DV + K D LD+W DSG S VL + P
Sbjct: 482 RFADMVEEQGTDLWFQLDSEELRKKLDVPTGYEKGMDTLDVWIDSGSSHFAVLVPRGENP 541
Query: 768 AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHD 827
A +Y+EG DQ GWF SSLL VA K APF++V HGFVVD G K+SKS G A D
Sbjct: 542 ADLYLEGSDQHRGWFQSSLLLGVASKGKAPFKSVLTHGFVVDLDGKKLSKSSG----AKD 597
Query: 828 ITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNIL 887
+++ ++ YG D+LR WVA+ + VP K I
Sbjct: 598 LSE--------------------------QINEYGADLLRLWVASEEFSE-DVPFSKEIF 630
Query: 888 NSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGE 943
+ D + IR+SLR LLG L + S+ +D Y + + Y
Sbjct: 631 SRLSDSYRLIRNSLRILLGNLFDFDPPIHSVPEDELLEIDRYFDFCIDQLIKKTKASYAN 690
Query: 944 FQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAP 1003
+++ + + L+ F ELS+FY ++KDRLYCD N +R S LH F L++ +AP
Sbjct: 691 YEFPQVYQSLVRFCSVELSSFYIDILKDRLYCDGKNWLSRRSAQTVLHRAFESLVKLLAP 750
Query: 1004 IMPHLAEEVY 1013
I+P AEE +
Sbjct: 751 IIPFTAEEAW 760
Score = 265 bits (678), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 232/398 (58%), Gaps = 14/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y+ E P+FILHDGPP+ANG H+G +NKILKDI L+S + G + Y+PGW
Sbjct: 35 KVYAILLELRKNSPKFILHDGPPFANGKAHMGSGLNKILKDIVLKSKNMFGFQCPYIPGW 94
Query: 66 DCHGLPIELKAITSKDKLLS-PLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
DCHGLPIE K ++ L + P IRKK + +A I QK +F+ GVL W+ N Y T
Sbjct: 95 DCHGLPIEHKVMSETPSLSNDPPTIRKKCQEYAKGWIEVQKEQFKRLGVLGAWD-NPYIT 153
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D Y N+L F L ++ +YR L+PV+WS +TALAE+E+EY+ SIY++
Sbjct: 154 MDPHYEANELRLFAELVEKKLVYRGLRPVFWSIGCKTALAEAEVEYQKKE-DISIYVEFP 212
Query: 185 LNQVPAH---LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+++ L +G++ L+WTTTPW+LPAN +A NP L Y + V +IV+ L
Sbjct: 213 VSEKSCKEGGLPQGSS---FLVWTTTPWTLPANLALAVNPDLSYELRRVGSKYLIVSSKL 269
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
++ ++ + ++ G+ L+ + Y+HP+ R ++ A FVS G+G+VH AP
Sbjct: 270 APTIPKLSESTL-ILSFSKGKKLEGLQYVHPLLP--RYGEVYAADFVSEETGSGIVHIAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAG-PGLEGLNILGDGKDQVLHLVEPDVLWT 360
HG +D+ L + + + V + + + G+++ + G + G N+ L E +LW
Sbjct: 327 GHGMEDYQLGVEKGLAVFSPVDDLGRFTKECGIEKIVGRNVFDANPILCDMLEEKGLLWA 386
Query: 361 EN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ Y H YP+ WR+K P+I ++ QWFI+ ER K +AL
Sbjct: 387 KKLYVHDYPFCWRSKTPIIFRSVPQWFINIERFKIQAL 424
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 20/229 (8%)
Query: 1069 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYHHL--------------NLITNQGK 1114
L+ V P++P E VY+ + T S H H + + + + G+
Sbjct: 294 LQYVHPLLPRYGE-VYAADFVSEETGSGIVHIAPGHGMEDYQLGVEKGLAVFSPVDDLGR 352
Query: 1115 YSPDAG-PGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQW 1172
++ + G + G N+ L E +LW + Y H YP+ WR+K P+I ++ QW
Sbjct: 353 FTKECGIEKIVGRNVFDANPILCDMLEEKGLLWAKKLYVHDYPFCWRSKTPIIFRSVPQW 412
Query: 1173 FIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGD 1230
FI+ ER K +AL +E V ++P+ + ++ + R WCISRQR WG+PIPVFY DG+
Sbjct: 413 FINIERFKIQALHEIEKVQWIPKRGENRIKGAVESRKDWCISRQRYWGIPIPVFYRKDGE 472
Query: 1231 TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSNQGL 1279
++ + I+ F +++E G D W+ L E+L DV + K L
Sbjct: 473 PLL-DPKIIRRFADMVEEQGTDLWFQLDSEELRKKLDVPTGYEKGMDTL 520
>gi|290968697|ref|ZP_06560235.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|335049616|ref|ZP_08542603.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 199-6]
gi|290781350|gb|EFD93940.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|333762351|gb|EGL39849.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 199-6]
Length = 932
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 217/627 (34%), Positives = 323/627 (51%), Gaps = 62/627 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT--DLHALIWTTTPWSLPANQFIA 475
TALAE+E+EYK D S SI++K K V H+ + A + ALIWTTTPW++P N I+
Sbjct: 192 TALAEAEIEYKEDK-SFSIFVKFKAVDVNCHMPKDADPDKVFALIWTTTPWTIPCNLAIS 250
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFP----GQYLQDITYIHPIN 531
N Y V +++A+ V+ + DID P G+ L+ + HP
Sbjct: 251 ANADFTYVWVKVAEEYLLMAQERVDEV--MKAADIDTYEILPERMQGKQLEGFIFQHPFY 308
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL---AEKIPVLNLITNQGKYSPD 588
+R +L V+ GTGLVH AP HGQDDF + + A I L + G+Y+ D
Sbjct: 309 --ERKAPILLGDHVTLDAGTGLVHTAPDHGQDDFEVCMKYSAWDIKPLGTVDETGRYT-D 365
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTE 647
PG EG+ + + + L D L+ ++ ++H YP+ WR K+P+I +A++QWF +
Sbjct: 366 KVPGYEGVFVFDNNVPVIKKLAAIDALFAKSTFRHQYPHCWRCKEPIIYRATEQWFSSVD 425
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVN 705
+ EAL +++V ++P + + I R WCISRQRVWGVPIP+FY I+N
Sbjct: 426 GYRQEALQAIDQVQWIPSWGHDRIYNMIHDRGDWCISRQRVWGVPIPIFYCKHCGEYIIN 485
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWS 760
+ + H + E G D WW+ S +LL + K +DI+D+WFDSG +
Sbjct: 486 DETVAHLQKIFAEEGSDAWWAHSEAELLPEGFTCPACGSHEFRKESDIMDVWFDSGCTHQ 545
Query: 761 HVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
VLK P +Y+EG DQ GWF SSLLTSVA AP++ V HGF VD +G KM
Sbjct: 546 GVLKHDPDLSYPCDLYLEGSDQHRGWFNSSLLTSVATNGYAPYKAVLTHGFTVDGEGRKM 605
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKSVGN ++ ++ + YG DV+R WV++ A
Sbjct: 606 SKSVGNTVAPQEVIE-----------------------------KYGADVMRLWVSS-AD 635
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
+ + IL D +KIR++ RYLLG L + + S+ +D + L RL
Sbjct: 636 YQGDIRLSPKILKQLSDVYRKIRNTFRYLLGSLADFDPAKDSVPYEALTELDKWALSRLE 695
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
+ + ++ Y +Q+ + NF +LSA Y ++KDRLY + + R S T++
Sbjct: 696 QVRESVTESYETYQFHVMYHTIHNFCTVDLSAMYLDVIKDRLYTERQDAPVRRSAQTTIY 755
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
I L++ VAP++ AEEV+ H+P
Sbjct: 756 RILTTLVKIVAPVLSFTAEEVWQHMPE 782
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 157/403 (38%), Positives = 228/403 (56%), Gaps = 16/403 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y + + G P+FILHDGPPYANG HIGHA+NK+LKDI L+ QG YVPGW
Sbjct: 35 DVYHKRLKKRAGGPKFILHDGPPYANGKLHIGHALNKVLKDIVLKYKTQQGFYTKYVPGW 94
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE I + ++PL++RKK +++ALE + QK +F +GVL +WEH Y
Sbjct: 95 DTHGLPIEHAVIKNTGLNRHEMTPLELRKKCRDYALEQVEIQKNDFIRFGVLGEWEHP-Y 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T Q+ F + K +IY+ K VYW P TALAE+E+EYK D S SI++K
Sbjct: 154 LTLQHHIEVEQIGVFGKMAKNGHIYKGKKTVYWCPHCETALAEAEIEYKEDK-SFSIFVK 212
Query: 183 IKLNQVPAHLLEGA--TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
K V H+ + A + ALIWTTTPW++P N I+ N Y V +++A+
Sbjct: 213 FKAVDVNCHMPKDADPDKVFALIWTTTPWTIPCNLAISANADFTYVWVKVAEEYLLMAQE 272
Query: 241 LVESLKWTFQTDI-EVVCD-FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
V+ + D E++ + G+ L+ + HP +R +L V+ GTGLVH
Sbjct: 273 RVDEVMKAADIDTYEILPERMQGKQLEGFIFQHPFY--ERKAPILLGDHVTLDAGTGLVH 330
Query: 299 CAPAHGQDDFLLAL---AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
AP HGQDDF + + A I L + G+Y+ D PG EG+ + + + L
Sbjct: 331 TAPDHGQDDFEVCMKYSAWDIKPLGTVDETGRYT-DKVPGYEGVFVFDNNVPVIKKLAAI 389
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
D L+ ++ ++H YP+ WR K+P+I +A++QWF + + EAL
Sbjct: 390 DALFAKSTFRHQYPHCWRCKEPIIYRATEQWFSSVDGYRQEAL 432
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPV 1164
L + G+Y+ D PG EG+ + + L D L+ ++ ++H YP+ WR K+P+
Sbjct: 354 LGTVDETGRYT-DKVPGYEGVFVFDNNVPVIKKLAAIDALFAKSTFRHQYPHCWRCKEPI 412
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A++QWF + + EAL ++ V ++P + + I R WCISRQRVWGVPIP
Sbjct: 413 IYRATEQWFSSVDGYRQEALQAIDQVQWIPSWGHDRIYNMIHDRGDWCISRQRVWGVPIP 472
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY I+N+ + H + E G D WW+ +LL
Sbjct: 473 IFYCKHCGEYIINDETVAHLQKIFAEEGSDAWWAHSEAELL 513
>gi|349612334|ref|ZP_08891555.1| isoleucyl-tRNA synthetase [Lactobacillus sp. 7_1_47FAA]
gi|348608930|gb|EGY58897.1| isoleucyl-tRNA synthetase [Lactobacillus sp. 7_1_47FAA]
Length = 928
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/623 (34%), Positives = 337/623 (54%), Gaps = 67/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ KL + + + + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFKL--IDGKDVLDTDNTYLIIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YS+ V +VA L+E + D VV F G ++ + HPI ++
Sbjct: 248 PKFDYSLVQVNDKKFVVATGLLEKVAQEIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G DDF + L +P+ + + QG Y+ D P L G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAG 363
Query: 596 LNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ D +L ++ +L + + HSYP+DWRTKKPVI +A+ QWF E + +
Sbjct: 364 M-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQI 422
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L +++VNF+P+ K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 423 LDEIDKVNFLPDWGKIRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHI 482
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ ++ G W++ + ++LL ++ N TK DILD+WFDSG S + V+ +P
Sbjct: 483 AKIFEKEGSMAWFTKTAKELLPDGFTSSHSPNGEFTKEKDILDVWFDSGSSHTAVMAQRP 542
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL+TSVA+ AP+R + GFV+D+KG KMSKS+GNV
Sbjct: 543 ELSYPADLYLEGSDQYRGWFNSSLITSVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNV 602
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ +D+ + G +++R WVA A V +
Sbjct: 603 IAPNDV-----------------------------IKQMGAEIIRLWVAG-ADTTSDVAV 632
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHN---------HSESTGSISRYVDVYMLKRLCEF 933
++IL + + +K+R+++R++L + + E +G + +Y++V + K L E
Sbjct: 633 SQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDEMSG-VDQYMEVKLNKLLAEC 691
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y + + + + +F+ N+LS+FY KD LY +S +G+AR S +++
Sbjct: 692 LDA----YDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESEDGQARRSMQTVIYDF 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++S+L
Sbjct: 748 LVKLAKLLTPILPHTMEEIWSYL 770
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 225/394 (57%), Gaps = 16/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F +HDGPP+ANG H+GHA+NKI KDI +R ++G +VPGWD HG
Sbjct: 39 QRLKLNEGHPRFDMHDGPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K L+ + R+ ++AL I Q+ +F+ GV+ADW H Y TF
Sbjct: 99 LPIEQQLAKKGVKRKELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNH-PYITFQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F +Y + YIY+ KPVYWS SS + LAE+E+EYK D + SI++ KL
Sbjct: 158 QFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFKL-- 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
+ + + + +IWTTTPW++PAN+ I NP +YS+ V +VA L+E +
Sbjct: 215 IDGKDVLDTDNTYLIIWTTTPWTIPANEAICVNPKFDYSLVQVNDKKFVVATGLLEKVAQ 274
Query: 248 TFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQ 305
D VV F G ++ + HPI ++ L+ GF V+ GTGLVH AP G
Sbjct: 275 EIGWDEYHVVKSFKGSEMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHTAPGFGA 331
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
DDF + L +P+ + + QG Y+ D P L G+ D +L ++ +L + +
Sbjct: 332 DDFNVGLKYNLPIFSPVDGQGNYT-DEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 390 THSYPHDWRTKKPVIFRATTQWFASIEPFRQQIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF E + + L ++ VNF+P+ K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLPDWGKIRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSMAWFTKTAKELL 503
>gi|322421576|ref|YP_004200799.1| isoleucyl-tRNA synthetase [Geobacter sp. M18]
gi|320127963|gb|ADW15523.1| isoleucyl-tRNA synthetase [Geobacter sp. M18]
Length = 925
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 218/639 (34%), Positives = 327/639 (51%), Gaps = 61/639 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLE--GATDLHALIWTTTPWSLPANQFI 474
GTALAE+E+EY DH S S+++K L + ++ +IWTTTPW+LPAN I
Sbjct: 191 GTALAEAEVEY-ADHKSPSVFVKFALKEDAGSVVPELAGKKASMVIWTTTPWTLPANLAI 249
Query: 475 AFNPALEYSVASV-KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
A +P L+Y+ + G VIVA L E+ + V+ FP + L+ HP
Sbjct: 250 AIHPELDYAALQLDSGDVVIVADGLKESFLKEIGAEGSVLAKFPSRVLEKRLARHPFY-- 307
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+D +L V+ GTG VH AP HGQ+D+ L L E + V N + N+G++ +
Sbjct: 308 DQDSIILLGEHVTLEAGTGCVHTAPGHGQEDYELGLKEGLDVYNPVDNRGRFFENI-EFF 366
Query: 594 EGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER--IK 650
G + K+ + L+E L + HSYP+ WR KKP+I +A++QWFI E+ ++
Sbjct: 367 GGQFVFDANKNVIEKLIEVGALLGHKEISHSYPHCWRCKKPIIFRATEQWFISMEKNDLR 426
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
+AL + VN++P+ ++ + I RP WC+SRQR WGVPI FY ++ +
Sbjct: 427 GKALEQINNVNWIPKWGRERIYGMIENRPDWCVSRQRSWGVPIAAFYCKSCGHVLADGKI 486
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVL 763
+ L EH D W+ + L + K +DILD+WFDSG S + VL
Sbjct: 487 MHQVADLFAEHTSDIWYDWDAAKFLPEGTACPSCGKAEFEKESDILDVWFDSGTSHAAVL 546
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSLL SV + AP++NV HGFV+D G KMSKS
Sbjct: 547 ELRDNLGSPADMYLEGSDQHRGWFHSSLLASVGTRGRAPYKNVLTHGFVMDGAGRKMSKS 606
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
VGNV++ D+ + +G DVLR WVAA +D
Sbjct: 607 VGNVVAPEDV-----------------------------IKKFGADVLRLWVAAQDYRD- 636
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQ---- 934
+ I + IL + ++IR++ RY+LG +H+ + T ++ Y D+ L R Q
Sbjct: 637 DLRISQEILTRLSESYRRIRNTCRYILGNIHDFNPDTDCVA-YADMPELDRWAMHQLELL 695
Query: 935 -NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y + ++ + F E+SAFY ++KDR+Y + AR SG ++ I
Sbjct: 696 KEKVLASYNDSEFHILYHAVNGFCTVEMSAFYLDILKDRVYTSKSDSLARRSGQTVMYRI 755
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVY 1032
L+R VAP++ AEEV++ +P GT S H ++
Sbjct: 756 LDALVRMVAPVLSFTAEEVWADMP---GTRESSVHLALF 791
Score = 270 bits (689), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 218/395 (55%), Gaps = 12/395 (3%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIEL--- 74
KP ++LHDGPPYANG HIGHA+NKILKDI L+S + G YVPGWDCHGLPIEL
Sbjct: 47 KPRYVLHDGPPYANGHIHIGHALNKILKDIVLKSKRMDGFAAPYVPGWDCHGLPIELQVE 106
Query: 75 KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQL 134
K + SK +S L++RK + +A + + Q+AEFE G+ DW+ Y T + Y
Sbjct: 107 KNLGSKKHEISKLEMRKLCREYAAKFVGIQRAEFERLGIFGDWDEP-YLTMNASYEGATA 165
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
+ + +Y+ KPV+W S TALAE+E+EY DH S S+++K L + ++
Sbjct: 166 RELARFAENGGLYKGKKPVHWCSSCGTALAEAEVEY-ADHKSPSVFVKFALKEDAGSVVP 224
Query: 195 --GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV-KGANVIVAKCLVESLKWTFQT 251
+IWTTTPW+LPAN IA +P L+Y+ + G VIVA L ES
Sbjct: 225 ELAGKKASMVIWTTTPWTLPANLAIAIHPELDYAALQLDSGDVVIVADGLKESFLKEIGA 284
Query: 252 DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 311
+ V+ FP + L+ HP +D +L V+ GTG VH AP HGQ+D+ L
Sbjct: 285 EGSVLAKFPSRVLEKRLARHPFY--DQDSIILLGEHVTLEAGTGCVHTAPGHGQEDYELG 342
Query: 312 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYD 370
L E + V N + N+G++ + G + K+ + L+E L + HSYP+
Sbjct: 343 LKEGLDVYNPVDNRGRFFENI-EFFGGQFVFDANKNVIEKLIEVGALLGHKEISHSYPHC 401
Query: 371 WRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
WR KKP+I +A++QWFI E+ + + N+
Sbjct: 402 WRCKKPIIFRATEQWFISMEKNDLRGKALEQINNV 436
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVI 1165
N + N+G++ + G + K+ + L+E L + HSYP+ WR KKP+I
Sbjct: 351 NPVDNRGRFFENI-EFFGGQFVFDANKNVIEKLIEVGALLGHKEISHSYPHCWRCKKPII 409
Query: 1166 LKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+A++QWFI E+ ++ +AL + VN++P+ ++ + I RP WC+SRQR WGVPI
Sbjct: 410 FRATEQWFISMEKNDLRGKALEQINNVNWIPKWGRERIYGMIENRPDWCVSRQRSWGVPI 469
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
FY ++ + + L EH D W+ + L
Sbjct: 470 AAFYCKSCGHVLADGKIMHQVADLFAEHTSDIWYDWDAAKFL 511
>gi|161507322|ref|YP_001577276.1| isoleucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
gi|172048227|sp|A8YUP7.1|SYI_LACH4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|160348311|gb|ABX26985.1| Isoleucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
Length = 927
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 325/621 (52%), Gaps = 63/621 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V +VA L+ E + W D VV G ++ + HPI +
Sbjct: 248 PKFDYSVVQVGDKRYVVASGLLDKVAEEIGWD---DYKVVQTVKGADMEYMKAKHPIYDK 304
Query: 534 QRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ L+ GF V+ GTGLVH AP G+DDF + +P+ + + G Y+ D P
Sbjct: 305 E---SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQRYNLPIFSPVDAHGCYT-DEVPE 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L+G+ K V L + L + + HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 361 LKGMFYQDVDKLMVQKLKDAGALLKLKIFTHSYPHDWRTKKPVIFRATTQWFASIAPFRD 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
+ L +E+ +F+P K L + I R W ISRQR WGVP+P+FY D T IV I+
Sbjct: 421 QILDQIEKASFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIE 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H + ++ G + W++ + ++LL + N TK DILD+WFDSG SWS V++
Sbjct: 481 HIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEK 540
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+G
Sbjct: 541 RDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGQAPYKQVLSQGFVLDDKGHKMSKSLG 600
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPT 879
NVIS +D+ KK+ G +++R WVA A + D
Sbjct: 601 NVISPNDVI---KKM--------------------------GAEIIRLWVAQADTTSDVA 631
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V +G IL S + +KIR++ RY+L + ++ R VD YM +L +
Sbjct: 632 VSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYDDLRSVDQYMEVKLNDLIK 689
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y +F + + + NF+ N+LSAFY KD LY + N AR S +++
Sbjct: 690 ECLAAYDKFDFTTVFKKVFNFISNDLSAFYLDFAKDVLYIEVENSHARRSMQTVIYDAAV 749
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++ L
Sbjct: 750 KLAKILTPILPHTMEEIWGFL 770
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 215/385 (55%), Gaps = 20/385 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + +A E + Q +F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKTMDRAKYRELCRQYAEEQVQKQMTDFKRLGVMADWDH-PYITLQH 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++ +
Sbjct: 158 DFEAQEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFPVTD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV----E 243
+ D + +IWTTTPW++PAN+ I NP +YSV V +VA L+ E
Sbjct: 217 GKGII--DPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKRYVVASGLLDKVAE 274
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPA 302
+ W D +VV G ++ + HPI ++ L+ GF V+ GTGLVH AP
Sbjct: 275 EIGW---DDYKVVQTVKGADMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-E 361
G+DDF + +P+ + + G Y+ D P L+G+ K V L + L +
Sbjct: 329 FGEDDFNVGQRYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAGALLKLK 387
Query: 362 NYQHSYPYDWRTKKPVILKASQQWF 386
+ HSYP+DWRTKKPVI +A+ QWF
Sbjct: 388 IFTHSYPHDWRTKKPVIFRATTQWF 412
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHS 1153
F V NL + G Y+ D P L+G+ K V L + L + + HS
Sbjct: 334 FNVGQRYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAGALLKLKIFTHS 392
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YP+DWRTKKPVI +A+ QWF + + L +E +F+P K L + I R W I
Sbjct: 393 YPHDWRTKKPVIFRATTQWFASIAPFRDQILDQIEKASFIPSWGKTRLYNMIKDRGDWVI 452
Query: 1214 SRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQR WGVP+P+FY D T IV I+H + ++ G + W++ ++LL
Sbjct: 453 SRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSNAWYTHTAKELL 503
>gi|385814077|ref|YP_005850470.1| isoleucyl-tRNA synthetase [Lactobacillus helveticus H10]
gi|323466796|gb|ADX70483.1| Isoleucyl-tRNA synthetase [Lactobacillus helveticus H10]
Length = 929
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 325/621 (52%), Gaps = 63/621 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + + D + +IWTTTPW++PAN+ I N
Sbjct: 193 STLAEAEVEYK-DVEANSIFVAFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVN 249
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V +VA L+ E + W D VV G ++ + HPI +
Sbjct: 250 PKFDYSVVQVGDKRYVVASGLLDKVAEEIGWD---DYKVVQTVKGADMEYMKAKHPIYDK 306
Query: 534 QRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ L+ GF V+ GTGLVH AP G+DDF + +P+ + + G Y+ D P
Sbjct: 307 E---SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQRYNLPIFSPVDAHGCYT-DEVPE 362
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L+G+ K V L + L + + HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 363 LKGMFYQDVDKLMVQKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIAPFRD 422
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
+ L +E+ +F+P K L + I R W ISRQR WGVP+P+FY D T IV I+
Sbjct: 423 QILDQIEKASFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIE 482
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H + ++ G + W++ + ++LL + N TK DILD+WFDSG SWS V++
Sbjct: 483 HIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEK 542
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+G
Sbjct: 543 RDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGQAPYKQVLSQGFVLDDKGHKMSKSLG 602
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPT 879
NVIS +D+ KK+ G +++R WVA A + D
Sbjct: 603 NVISPNDVI---KKM--------------------------GAEIIRLWVAQADTTSDVA 633
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V +G IL S + +KIR++ RY+L + ++ R VD YM +L +
Sbjct: 634 VSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYDDLRSVDQYMEVKLNDLIK 691
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y +F + + + NF+ N+LSAFY KD LY + N AR S +++
Sbjct: 692 ECLAAYDKFDFTTVFKKVFNFISNDLSAFYLDFAKDVLYIEVENSHARRSMQTVIYDAAV 751
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++ L
Sbjct: 752 KLAKILTPILPHTMEEIWGFL 772
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 219/391 (56%), Gaps = 21/391 (5%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN GKP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 36 NKLYE-QRLKLNEGKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVP 94
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E + Q +F+ GV+ADW+H
Sbjct: 95 GWDTHGLPVEQQLAKKGVDRKTMDRAKYRELCRQYAEEQVQKQMTDFKRLGVMADWDH-P 153
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 154 YITLQHDFEAQEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 212
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + D + +IWTTTPW++PAN+ I NP +YSV V +VA L
Sbjct: 213 AFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKRYVVASGL 270
Query: 242 V----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGL 296
+ E + W D +VV G ++ + HPI ++ L+ GF V+ GTGL
Sbjct: 271 LDKVAEEIGW---DDYKVVQTVKGADMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGL 324
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP G+DDF + +P+ + + G Y+ D P L+G+ K V L +
Sbjct: 325 VHTAPGFGEDDFNVGQRYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAG 383
Query: 357 VLWT-ENYQHSYPYDWRTKKPVILKASQQWF 386
L + + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 384 ALLKLKVFTHSYPHDWRTKKPVIFRATTQWF 414
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHS 1153
F V NL + G Y+ D P L+G+ K V L + L + + HS
Sbjct: 336 FNVGQRYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAGALLKLKVFTHS 394
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YP+DWRTKKPVI +A+ QWF + + L +E +F+P K L + I R W I
Sbjct: 395 YPHDWRTKKPVIFRATTQWFASIAPFRDQILDQIEKASFIPSWGKTRLYNMIKDRGDWVI 454
Query: 1214 SRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQR WGVP+P+FY D T IV I+H + ++ G + W++ ++LL
Sbjct: 455 SRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSNAWYTHTAKELL 505
>gi|42518905|ref|NP_964835.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
gi|41583191|gb|AAS08801.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
Length = 935
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 326/623 (52%), Gaps = 66/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 198 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 253
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V G ++ + E+L W D VV G +TY HP+
Sbjct: 254 PKFDYSVVEVNGKKYVIGSQRLSAVAEDLGWE---DYKVVKTLKGTDFDRMTYQHPL--- 307
Query: 534 QRDLK--LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-G 590
D+ ++ +V++ GTGLVH A G+DD+ + +PV + + QG+++ +
Sbjct: 308 -YDVTGVIMNDTYVTADDGTGLVHNATGFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPD 366
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF ++
Sbjct: 367 PDLVGM-FYDDANKVVADKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASIDK 425
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEA 707
+ + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 426 FRDQILAEIEKANFIPAWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVTPE 485
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I+H + ++ G + W++ + E+LL + N K DILD+WFDSG SW+ V
Sbjct: 486 TIEHVAQIFEKEGSNAWYTYTAEELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWAGV 545
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
++++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSK
Sbjct: 546 MQERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSK 605
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI S +D+ + G +++R WVA A
Sbjct: 606 SLGNVI-----------------------SPNDV------IKQMGAEIIRLWVAG-ADTT 635
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + ++IL S + +KIR+++R++L + +I+ VD YM +L
Sbjct: 636 SDVAVSQDILRQSAESYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIKLNRL 695
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y +F + + + +F+ N+LSAFY KD LY D+ + E R S ++++
Sbjct: 696 IEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTVIYDV 755
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EEV+ +L
Sbjct: 756 LVKLTKLMTPILPHTMEEVWGYL 778
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 221/415 (53%), Gaps = 25/415 (6%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 46 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA E + Q A+F+ GV+ADW+H Y T
Sbjct: 106 LPVEQQLAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDH-PYITLQP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 165 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIKD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +YSV V G ++ + E
Sbjct: 224 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYSVVEVNGKKYVIGSQRLSAVAE 280
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK--LLPAGFVSSSKGTGLVHCAP 301
L W D +VV G +TY HP+ D+ ++ +V++ GTGLVH A
Sbjct: 281 DLGW---EDYKVVKTLKGTDFDRMTYQHPL----YDVTGVIMNDTYVTADDGTGLVHNAT 333
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--DVL 358
G+DD+ + +PV + + QG+++ + P L G+ D V +E +L
Sbjct: 334 GFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPDPDLVGM-FYDDANKVVADKLEKAGALL 392
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+ HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 393 KLSFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTR 447
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 397 FTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTRLYNMIKDRG 456
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ E+LL
Sbjct: 457 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTYTAEELL 511
>gi|84029519|sp|Q74JX6.2|SYI_LACJO RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
Length = 928
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 326/623 (52%), Gaps = 66/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V G ++ + E+L W D VV G +TY HP+
Sbjct: 247 PKFDYSVVEVNGKKYVIGSQRLSAVAEDLGWE---DYKVVKTLKGTDFDRMTYQHPL--- 300
Query: 534 QRDLK--LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-G 590
D+ ++ +V++ GTGLVH A G+DD+ + +PV + + QG+++ +
Sbjct: 301 -YDVTGVIMNDTYVTADDGTGLVHNATGFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPD 359
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF ++
Sbjct: 360 PDLVGM-FYDDANKVVADKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASIDK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEA 707
+ + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 419 FRDQILAEIEKANFIPAWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVTPE 478
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I+H + ++ G + W++ + E+LL + N K DILD+WFDSG SW+ V
Sbjct: 479 TIEHVAQIFEKEGSNAWYTYTAEELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWAGV 538
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
++++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSK
Sbjct: 539 MQERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSK 598
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI S +D+ + G +++R WVA A
Sbjct: 599 SLGNVI-----------------------SPNDV------IKQMGAEIIRLWVAG-ADTT 628
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + ++IL S + +KIR+++R++L + +I+ VD YM +L
Sbjct: 629 SDVAVSQDILRQSAESYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIKLNRL 688
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y +F + + + +F+ N+LSAFY KD LY D+ + E R S ++++
Sbjct: 689 IEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTVIYDV 748
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EEV+ +L
Sbjct: 749 LVKLTKLMTPILPHTMEEVWGYL 771
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 221/415 (53%), Gaps = 25/415 (6%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA E + Q A+F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 158 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +YSV V G ++ + E
Sbjct: 217 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYSVVEVNGKKYVIGSQRLSAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK--LLPAGFVSSSKGTGLVHCAP 301
L W D +VV G +TY HP+ D+ ++ +V++ GTGLVH A
Sbjct: 274 DLGW---EDYKVVKTLKGTDFDRMTYQHPL----YDVTGVIMNDTYVTADDGTGLVHNAT 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--DVL 358
G+DD+ + +PV + + QG+++ + P L G+ D V +E +L
Sbjct: 327 GFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPDPDLVGM-FYDDANKVVADKLEKAGALL 385
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+ HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 386 KLSFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTR 440
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 390 FTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTRLYNMIKDRG 449
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ E+LL
Sbjct: 450 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTYTAEELL 504
>gi|251810623|ref|ZP_04825096.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876376|ref|ZP_06285243.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|417913399|ref|ZP_12557066.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU109]
gi|420165268|ref|ZP_14671972.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM088]
gi|420206486|ref|ZP_14711996.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM008]
gi|421607305|ref|ZP_16048551.1| isoleucyl-tRNA ligase [Staphylococcus epidermidis AU12-03]
gi|251805783|gb|EES58440.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295401|gb|EFA87928.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|341655681|gb|EGS79405.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU109]
gi|394236435|gb|EJD81969.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM088]
gi|394278325|gb|EJE22642.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM008]
gi|406657097|gb|EKC83490.1| isoleucyl-tRNA ligase [Staphylococcus epidermidis AU12-03]
Length = 916
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 325/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGHKYIVAQALSEAVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHCGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 230/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EAVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|260663602|ref|ZP_05864491.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
gi|260551828|gb|EEX24943.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
Length = 930
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 324/618 (52%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ Q LL+ +D + + WTTTPW++PA++ +A +
Sbjct: 191 SALAEAEVEYH-DVVAKTAFFTEQV-QDGKGLLD--SDTYLVGWTTTPWTIPASEAVAVS 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
EY++ G++ +VA L+ +L F TD VV F G ++ +T HP
Sbjct: 247 ADFEYALVKPSGSDRKYVVAASLLGDLAQKFNWTDYQVVKTFKGAEMEGMTTKHPYI--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R+L + A +V+ GTGLVH AP +G DD+ +P+ + +QG + + GP +
Sbjct: 305 RELLVGLADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIFAPMNDQGVLTAENGPEFD 364
Query: 595 GLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D D L L+E +L E+ +HSYP+DWRTKKP++ +A+ QWF+ ++++ E
Sbjct: 365 GV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDE 423
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L ++EV + P K LR+ + R W ISRQRVWGVP+P+FY D T I+ E I H
Sbjct: 424 ILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIFYAEDGTPIMTEETINH 483
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L E+G + W+ + LL + N TK DI+D+WFDSG S VL ++
Sbjct: 484 VSDLFREYGSNVWFDREAKDLLPAGFTSEHSPNGKFTKETDIMDVWFDSGSSHQGVLAER 543
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSV + AP+++V GF +D+ G KMSKS+GN
Sbjct: 544 DYLTYPADMYLEGSDQYRGWFNSSLITSVVVSGHAPYKSVLSQGFTLDQSGKKMSKSLGN 603
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + + G +++R WV + A V
Sbjct: 604 VIDPNKVVK-----------------------------QMGAEIIRLWVMS-ADTSADVR 633
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYVDVYMLKRLCEFQNTMD 938
+ L + +K+R++ R+LL + VD YM F M
Sbjct: 634 VSMETLQQIAESYRKLRNTFRFLLANTSDFGPENFVAYEKREAVDQYMTVNFNRFLAGMR 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ + + A + L+NFV N+LS+FY + KD LY + + R S T + I L
Sbjct: 694 DEFDRYDFLNAYKHLINFVNNDLSSFYMNVAKDVLYIEPEDSHVRRSMQATFYEILSGLT 753
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EEV+S++
Sbjct: 754 KLLTPILPHTTEEVWSYM 771
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 231/395 (58%), Gaps = 16/395 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPSFVLHDGPPYANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + R + +AL + QK F+ GV +W+H Y T K
Sbjct: 99 LPIEHQLTKAGYDRKKMSLTEFRDLCQKYALGQVEIQKKGFKRLGVAGEWDH-PYLTLAK 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++ Q
Sbjct: 158 EFEAAQIKVFGAFAKRGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFTEQV-Q 215
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESL 245
LL+ +D + + WTTTPW++PA++ +A + EY++ G++ +VA L+ L
Sbjct: 216 DGKGLLD--SDTYLVGWTTTPWTIPASEAVAVSADFEYALVKPSGSDRKYVVAASLLGDL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F TD +VV F G ++ +T HP R+L + A +V+ GTGLVH AP +G
Sbjct: 274 AQKFNWTDYQVVKTFKGAEMEGMTTKHPYI--DRELLVGLADYVTDDAGTGLVHTAPGYG 331
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTEN 362
DD+ +P+ + +QG + + GP +G+ D D L L+E +L E+
Sbjct: 332 DDDYNFGKKYNLPIFAPMNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEED 390
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+HSYP+DWRTKKP++ +A+ QWF+ ++++ E L
Sbjct: 391 LEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDEIL 425
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ +QG + + GP +G+ + D L L+E +L E+ +HSYP+DWRTKKP++
Sbjct: 349 MNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ ++++ E L ++ V + P K LR+ + R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIDKMRDEILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L E+G + W+ + LL
Sbjct: 468 YAEDGTPIMTEETINHVSDLFREYGSNVWFDREAKDLL 505
>gi|183221665|ref|YP_001839661.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911741|ref|YP_001963296.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|254782416|sp|B0SBW4.1|SYI_LEPBA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|254782417|sp|B0STE5.1|SYI_LEPBP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|167776417|gb|ABZ94718.1| Isoleucine--tRNA ligase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167780087|gb|ABZ98385.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase; IleRS)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 915
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 333/630 (52%), Gaps = 65/630 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
TA AE+E+EY+ +H+S SIY+K + +G TD H LIWTTTPW+LPAN I F
Sbjct: 198 ATAHAEAEIEYQ-NHVSPSIYVKFAV--------KGETDTHCLIWTTTPWTLPANLAICF 248
Query: 477 NPALEYSV-ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
N L YS+ S +I+A L E ++ + + L+ + ++HP R
Sbjct: 249 NEELPYSLFQSDAHGRLILADGLKEAVEQKTGITLTKIKSLSNADLKQMVFLHPFL--DR 306
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L V+ GTG VH AP HG DD+ + A +P L+ + + G+Y+ D ++G
Sbjct: 307 ESIPLFGNHVTLDAGTGCVHTAPGHGTDDYRVGTAAGLPTLSPVDDYGRYT-DEFEMMKG 365
Query: 596 LNILGDGKDQVLHLVEPDVL-WTENYQHSYPYDWRTKKPVILKASQQWF--IDTERIKPE 652
+ I V L E + L + HSYP+ WR+KKP+I +A+ QWF ID ++ E
Sbjct: 366 IKIWDANPKIVELLREKNALVHFSEFTHSYPHSWRSKKPLIFRATPQWFFSIDHNGLRDE 425
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTII--VNEANIK 710
+L +++V ++P+ +R + RP WC+SRQR WGVPIP F + +++ I+
Sbjct: 426 SLKAIDKVQWIPDWGITRIRSMVESRPDWCLSRQRNWGVPIPSFTCKSCGLTHLDDKTIQ 485
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDVNSN-----VTKSNDILDIWFDSGISWSHVLKD 765
HF ++ + G + W+ + LL SN + + DILD+WFDSG+S V D
Sbjct: 486 HFIQIVKKEGIEVWYEKEAKDLLPADTKCSNCGSEDLKQDKDILDVWFDSGVSSFAVFGD 545
Query: 766 ----KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+PA +Y+EG DQ GWF SSL S+A++ T P+++V HG+V+DEKG MSKS+GN
Sbjct: 546 SIGKEPADLYLEGSDQHRGWFQSSLWPSMAIRKTPPYKSVLTHGYVLDEKGHAMSKSLGN 605
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI+ DI + YG D+LR WV+ +D V
Sbjct: 606 VINP----------------------TTDI------INQYGADILRLWVSTQDFRD-DVK 636
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS------RYVDVYMLKRLCEFQN 935
IGK+ + + + +KIR++ RYLLG N S T + + +D Y L +L + +
Sbjct: 637 IGKDSIKTVSEAYRKIRNTFRYLLG---NTSAETLTWNLKKEELDTIDKYYLHKLAKLND 693
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ LY +Q+ + +L F +LS YF +++DR+YCD+ + R S +TL I
Sbjct: 694 EVKKLYDTYQFHQVYHKILGFCTVDLSQDYFEIIRDRMYCDAKESKTRRSSEYTLAVILE 753
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSS 1025
VL + +API+ EEV++ + F S
Sbjct: 754 VLSKLLAPILSFTTEEVWTSFGKKDSVFYS 783
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/426 (37%), Positives = 231/426 (54%), Gaps = 27/426 (6%)
Query: 12 REALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLP 71
+E KP F+LHDGPPYANG H+GH++NKILKDI ++S L G + +PGWDCHGLP
Sbjct: 48 KEIRKSKPSFVLHDGPPYANGNFHVGHSLNKILKDIIIKSKTLSGYQTDMIPGWDCHGLP 107
Query: 72 IE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
IE LK + + + P ++RKK + +A E + Q + + D E+N Y T E
Sbjct: 108 IEVQVLKNLGKEARNTGPSELRKKCREYAAEFVGKQGEDLNRFLCFWD-ENNKYLTMAPE 166
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ + F +L+ + YIY+ KPVYW TA AE+E+EY+ +HVS SIY+K
Sbjct: 167 FEARIVEVFGSLFAKGYIYKGKKPVYWCIDLATAHAEAEIEYQ-NHVSPSIYVKFA---- 221
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV-ASVKGANVIVAKCLVESLKW 247
++G TD H LIWTTTPW+LPAN I FN L YS+ S +I+A L E+++
Sbjct: 222 ----VKGETDTHCLIWTTTPWTLPANLAICFNEELPYSLFQSDAHGRLILADGLKEAVEQ 277
Query: 248 TFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
+ + L+ + ++HP R+ L V+ GTG VH AP HG DD
Sbjct: 278 KTGITLTKIKSLSNADLKQMVFLHPF--LDRESIPLFGNHVTLDAGTGCVHTAPGHGTDD 335
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL-WTENYQHS 366
+ + A +P L+ + + G+Y+ D ++G+ I V L E + L + HS
Sbjct: 336 YRVGTAAGLPTLSPVDDYGRYT-DEFEMMKGIKIWDANPKIVELLREKNALVHFSEFTHS 394
Query: 367 YPYDWRTKKPVILKASQQWF--IDTERIKPEALVCKTVGNILGRVGITHDRPGTALAESE 424
YP+ WR+KKP+I +A+ QWF ID ++ E+L + GIT R S
Sbjct: 395 YPHSWRSKKPLIFRATPQWFFSIDHNGLRDESLKAIDKVQWIPDWGITRIR-------SM 447
Query: 425 LEYKPD 430
+E +PD
Sbjct: 448 VESRPD 453
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVL-WTENYQHSYPYDWRTKKPV 1164
L+ + + G+Y+ D ++G+ I V L E + L + HSYP+ WR+KKP+
Sbjct: 347 LSPVDDYGRYT-DEFEMMKGIKIWDANPKIVELLREKNALVHFSEFTHSYPHSWRSKKPL 405
Query: 1165 ILKASQQWF--IDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
I +A+ QWF ID ++ E+L ++ V ++P+ +R + RP WC+SRQR WGVP
Sbjct: 406 IFRATPQWFFSIDHNGLRDESLKAIDKVQWIPDWGITRIRSMVESRPDWCLSRQRNWGVP 465
Query: 1223 IPVFYDGDTII--VNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSN 1271
IP F + +++ I+HF ++ + G + W+ + LL SN
Sbjct: 466 IPSFTCKSCGLTHLDDKTIQHFIQIVKKEGIEVWYEKEAKDLLPADTKCSN 516
>gi|312863569|ref|ZP_07723807.1| isoleucine--tRNA ligase [Streptococcus vestibularis F0396]
gi|322517027|ref|ZP_08069915.1| isoleucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
gi|311101105|gb|EFQ59310.1| isoleucine--tRNA ligase [Streptococcus vestibularis F0396]
gi|322124395|gb|EFX95895.1| isoleucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
Length = 932
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/617 (34%), Positives = 323/617 (52%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ + L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKEGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G IVA L+ +L F +++V+ + G L I HP + E
Sbjct: 247 ADIEYVLVKPAGETRKFIVASELLNSLSEKFGWAEVEVLNTYRGDELNQIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK NDI+D+WFDSG SW+ V+ ++P
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + + + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDTSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+LL + + +T +++ R VD YM R + T+
Sbjct: 635 MDILSQVSESYRKIRNTLRFLLANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVKTIRD 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ + L+NF+ ELSAFY KD +Y +S R ++I + +
Sbjct: 695 AYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+ PI+PH AEE++S+L
Sbjct: 755 LLTPILPHTAEEIWSYL 771
Score = 263 bits (671), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 223/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G YVPG
Sbjct: 34 AKMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ + L TD + ++WTTTP+++ A++ + +EY + G IVA
Sbjct: 212 NKVKEGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGETRKFIVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F ++EV+ + G L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWAEVEVLNTYRGDELNQIVTEHPWDTEVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L +EHG WW + LL
Sbjct: 469 EDKTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|321265666|ref|XP_003197549.1| isoleucyl-tRNA synthetase, mitochondrial [Cryptococcus gattii WM276]
gi|317464029|gb|ADV25762.1| Isoleucyl-tRNA synthetase, mitochondrial, putative [Cryptococcus
gattii WM276]
Length = 1003
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 238/714 (33%), Positives = 359/714 (50%), Gaps = 80/714 (11%)
Query: 356 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDR 415
D+ TE DW ++K + I R+ +A+V K G + R+ +
Sbjct: 181 DIQKTEMRALGVMADWDSEKNTYRTLDHDFEIRQLRLF-QAMVQK--GFVTHRLRPVYYS 237
Query: 416 PG--TALAESELEYKPDHISKSIYLKIKLNQ--VPAHL--------LEGATDLHALIWTT 463
P TALAE+ELEYK H S+S+Y+ + + + + L EG DL +IWTT
Sbjct: 238 PSSRTALAEAELEYKDGHKSRSVYVSLPVQEDGMSGALKEIYESINQEGRRDLSLVIWTT 297
Query: 464 TPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDF-PGQYLQ 522
TPWSLP N +A + +EY VAS + + V + + VV G L
Sbjct: 298 TPWSLPGNSGVAVHNDMEYVVASNEQGRLFVLAAERKEAMEKMMGPLKVVGQLKAGSQLV 357
Query: 523 DITYIHPINKEQRDLK---LLPAGFVSSSKGTGLVHCAPAHGQDDFL-LALAEKIP--VL 576
Y H + L + AG V+S GTGLVH APAHG +D++ A A +P +
Sbjct: 358 GTQYNHTFHPPSSPLPKPIVFAAGHVTSQTGTGLVHSAPAHGYEDYVAFAEAGIMPEKLR 417
Query: 577 NLITNQGKYSPD----AGP------GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSY 624
I + GK++ + AG L G +LG G D ++ L+ +L E +H Y
Sbjct: 418 CPIDDDGKFTDELVSWAGARDAPVSSLVGKEVLGKGTDAMVDLLRERGILLADETIEHRY 477
Query: 625 PYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCIS 684
PYDW++KKP+I++A+ QWF D E IK +A+A LE+V+F P A+K L + R WCIS
Sbjct: 478 PYDWKSKKPIIIRATPQWFADVEHIKEDAMAALEKVHFHPAQARKRLEAFVLSRSEWCIS 537
Query: 685 RQRVWGVPIPVFYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV 742
RQR WGVPIP +D G ++ + ++H ++D G D+WW+ VE+ + S +
Sbjct: 538 RQRSWGVPIPALFDSAGQPLMTPDV-LEHVIGVLDAKGVDYWWTGPVEEFVPPSHKGQQI 596
Query: 743 TKSNDILDIWFDSGISWSHVLKD--KP-----AHVYMEGMDQINGWFMSSLLTSV--ALK 793
TK D LD+WFDSG SW+ + + +P A VY+EG DQ GWF SSLLT +
Sbjct: 597 TKGFDTLDVWFDSGSSWTMLREANLRPRSFPLADVYLEGSDQHRGWFQSSLLTKIIGTDD 656
Query: 794 HTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQ 853
AP+ V HGFV+DE+G KMSKS GN +S I G +
Sbjct: 657 RQAPYGTVITHGFVMDEEGEKMSKSAGNGLSPMQIIHGLE-------------------- 696
Query: 854 GAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSE 913
V+VLR W AA IG + ++ + ++++R++ R++L +
Sbjct: 697 ---------VNVLRLW-AASVDYTSDASIGPSSISHVNELLRRLRNTTRFVLANTSGEDK 746
Query: 914 S--TGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKD 971
S R +D Y+L L + ++ Y + +++A + F + LS YF ++KD
Sbjct: 747 IYLEPSSLRIIDRYVLHELASLEASVQEAYDGYNFSKAIHSISTFATSTLSTLYFDIIKD 806
Query: 972 RLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL--PSRQGTF 1023
LYCD N R + + L ++ L++ +API+PHL+EE+Y ++ P + F
Sbjct: 807 TLYCDPSNSTTRNNVIGVLQHVLLRLVQMMAPIVPHLSEELYENMDGPKKSSVF 860
Score = 302 bits (774), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 250/430 (58%), Gaps = 39/430 (9%)
Query: 6 ELYSWQREALNGKPE--FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
ELY Q E G P+ F+LHDGPPYANG H+GHA+NK++KDI R N+++G+RVHY+P
Sbjct: 83 ELYKQQYE---GNPDSLFVLHDGPPYANGHLHMGHALNKVIKDIINRYNVIRGRRVHYIP 139
Query: 64 GWDCHGLPIELKAITSKDKL---LSPLDIRKKAKNFALETINTQKAEFESWGVLADW--E 118
GWDCHGLPIE KA+ + KL L+P +R +A+ AL+ I+ QK E + GV+ADW E
Sbjct: 140 GWDCHGLPIEQKALAAIGKLHTSLTPDQVRAQARQVALDAIDIQKTEMRALGVMADWDSE 199
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T D ++ QL F + ++ ++ L+PVY+SPSSRTALAE+ELEYK H S+S
Sbjct: 200 KNTYRTLDHDFEIRQLRLFQAMVQKGFVTHRLRPVYYSPSSRTALAEAELEYKDGHKSRS 259
Query: 179 IYLKIKLNQ--VPAHL--------LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA 228
+Y+ + + + + L EG DL +IWTTTPWSLP N +A + +EY VA
Sbjct: 260 VYVSLPVQEDGMSGALKEIYESINQEGRRDLSLVIWTTTPWSLPGNSGVAVHNDMEYVVA 319
Query: 229 SVKGANVIVAKCLVESLKWTFQTDIEVVCDF-PGQYLQDITYIHPINKEQRDLK---LLP 284
S + + V + ++VV G L Y H + L +
Sbjct: 320 SNEQGRLFVLAAERKEAMEKMMGPLKVVGQLKAGSQLVGTQYNHTFHPPSSPLPKPIVFA 379
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFL-LALAEKIP--VLNLITNQGKYSPD----AGP--- 334
AG V+S GTGLVH APAHG +D++ A A +P + I + GK++ + AG
Sbjct: 380 AGHVTSQTGTGLVHSAPAHGYEDYVAFAEAGIMPEKLRCPIDDDGKFTDELVSWAGARDA 439
Query: 335 ---GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 389
L G +LG G D ++ L+ +L E +H YPYDW++KKP+I++A+ QWF D
Sbjct: 440 PVSSLVGKEVLGKGTDAMVDLLRERGILLADETIEHRYPYDWKSKKPIIIRATPQWFADV 499
Query: 390 ERIKPEALVC 399
E IK +A+
Sbjct: 500 EHIKEDAMAA 509
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 96/156 (61%), Gaps = 5/156 (3%)
Query: 1123 LEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 1180
L G +LG+G D ++ L+ +L E +H YPYDW++KKP+I++A+ QWF D E IK
Sbjct: 444 LVGKEVLGKGTDAMVDLLRERGILLADETIEHRYPYDWKSKKPIIIRATPQWFADVEHIK 503
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEAN 1238
+A+A LE V+F P A+K L + R WCISRQR WGVPIP +D G ++ +
Sbjct: 504 EDAMAALEKVHFHPAQARKRLEAFVLSRSEWCISRQRSWGVPIPALFDSAGQPLMTPDV- 562
Query: 1239 IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
++H ++D G D+WW+ PVE+ + S +TK
Sbjct: 563 LEHVIGVLDAKGVDYWWTGPVEEFVPPSHKGQQITK 598
>gi|420214326|ref|ZP_14719605.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05005]
gi|420216156|ref|ZP_14721378.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05001]
gi|420219497|ref|ZP_14724513.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH04008]
gi|420231665|ref|ZP_14736310.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH051668]
gi|394283691|gb|EJE27856.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05005]
gi|394288922|gb|EJE32819.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH04008]
gi|394292606|gb|EJE36348.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05001]
gi|394302207|gb|EJE45655.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH051668]
Length = 916
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ I HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFIEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGF +D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFFMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 230/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ I HP R ++ V++ GTG VH
Sbjct: 269 EEVAEALGWD-KDSIQLEKEFTGKELEFIEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|257460821|ref|ZP_05625922.1| isoleucyl-tRNA synthetase [Campylobacter gracilis RM3268]
gi|257442152|gb|EEV17294.1| isoleucyl-tRNA synthetase [Campylobacter gracilis RM3268]
Length = 919
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 219/628 (34%), Positives = 324/628 (51%), Gaps = 66/628 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D SI++ L+ A+ GA A+IWTTTPW+LPAN I+ N
Sbjct: 194 SALAEAEVEYK-DKEDYSIFVAFDLSD-EANAKIGAKGAKAVIWTTTPWTLPANGAISLN 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P Y++ S N+I+AK LVE+L T+ +V +F L+ + I+P+N R
Sbjct: 252 PNEIYALTS---ENLILAKPLVESLVSLGITEGKIVKEFKATELEGLNAINPLN--DRAS 306
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG----------KYSP 587
KL+ V GTGLVH AP HG+DD+ + L I V+ + G +
Sbjct: 307 KLILGEHVLMDGGTGLVHTAPGHGEDDYFVGLKYGIEVIMPVDEGGCFDQTLKTKKLFRA 366
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
D L G++I +++L L+ P ++ + + HSYP+ WRT KPVI +A++QWFI +
Sbjct: 367 DVVDELVGMHIF-KANEKILELLGPALIKSGKFVHSYPHCWRTHKPVIYRATKQWFIAMD 425
Query: 648 RIKPE-------ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 700
P AL + +V F P+S L I RP WCISRQR WGVPI F D
Sbjct: 426 EPMPSGKTLRQVALEQIGKVKFYPQSGINRLTSMIENRPDWCISRQRDWGVPIAFFRDKS 485
Query: 701 TI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDSG 756
T I +E + + + G D WW + + +LL ++ N+ K DILD+WFDSG
Sbjct: 486 TKEPIFDEKILNNIYEIFKAKGADAWWQMEISELLPQDSGYRPENLEKVMDILDVWFDSG 545
Query: 757 ISWSHVLKDK-------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVD 809
+W VL+ PA +Y+EG DQ GWF SSLL S A+ AP++++ HGF VD
Sbjct: 546 STWKAVLQSGAYDAGKFPADMYLEGSDQHRGWFQSSLLLSCAINECAPYKSILTHGFTVD 605
Query: 810 EKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW 869
EKG KMSKSVGNV+ ++ + ++GV++LR W
Sbjct: 606 EKGQKMSKSVGNVVYPQEVAK-----------------------------SHGVEILRLW 636
Query: 870 VAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKR 929
VA + + I NIL + +KIR+++R+LL + +E S +D ++L R
Sbjct: 637 VAM-SDYSTDLKISDNILKQVSEQYRKIRNTIRFLLASTSDLNEIETSNFTRLDRWILTR 695
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
++ + + + +++ LLNF+ +LS Y + KDRLYCD + R S
Sbjct: 696 AANAFSSAEAAFRNYDFSKGFNALLNFLSADLSGIYLDICKDRLYCDESDEPRRRSAQSA 755
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I LL +AP + + +EV P
Sbjct: 756 IALITRALLPLIAPTLTYTIDEVMQFAP 783
Score = 262 bits (670), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 242/427 (56%), Gaps = 30/427 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA---I 77
F +HDGPPYANG HIGHA+NKILKDI +++ G+ + YVPGWDCHGLPIE + +
Sbjct: 52 FNIHDGPPYANGHLHIGHALNKILKDIITKTHYFFGEDIRYVPGWDCHGLPIEQQVEIKL 111
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY---VKNQL 134
+ K LS + IR+ + A E I+ Q+ EF+ G+L DW+ + Y T E+ + L
Sbjct: 112 GERKKSLSKVQIRELCRQHAKEFIDVQRNEFKDMGILGDWD-DPYLTLKFEFEAEIYKAL 170
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
CQ + K+ + KPV+WS ++++ALAE+E+EYK D SI++ L+ A+
Sbjct: 171 CQ---IAKKGILIERSKPVFWSWAAKSALAEAEVEYK-DKEDYSIFVAFDLSD-EANAKI 225
Query: 195 GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIE 254
GA A+IWTTTPW+LPAN I+ NP Y++ S N+I+AK LVESL T+ +
Sbjct: 226 GAKGAKAVIWTTTPWTLPANGAISLNPNEIYALTS---ENLILAKPLVESLVSLGITEGK 282
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
+V +F L+ + I+P+N R KL+ V GTGLVH AP HG+DD+ + L
Sbjct: 283 IVKEFKATELEGLNAINPLN--DRASKLILGEHVLMDGGTGLVHTAPGHGEDDYFVGLKY 340
Query: 315 KIPVLNLITNQG----------KYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQ 364
I V+ + G + D L G++I +++L L+ P ++ + +
Sbjct: 341 GIEVIMPVDEGGCFDQTLKTKKLFRADVVDELVGMHIF-KANEKILELLGPALIKSGKFV 399
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVG-NILGRVGITHDRPGTALAES 423
HSYP+ WRT KPVI +A++QWFI + P + V +G+V + + G S
Sbjct: 400 HSYPHCWRTHKPVIYRATKQWFIAMDEPMPSGKTLRQVALEQIGKVKF-YPQSGINRLTS 458
Query: 424 ELEYKPD 430
+E +PD
Sbjct: 459 MIENRPD 465
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 1115 YSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI 1174
+ D L G++I + +++L L+ P ++ + + HSYP+ WRT KPVI +A++QWFI
Sbjct: 364 FRADVVDELVGMHIF-KANEKILELLGPALIKSGKFVHSYPHCWRTHKPVIYRATKQWFI 422
Query: 1175 DTERIKPE-------ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
+ P AL + V F P+S L I RP WCISRQR WGVPI F
Sbjct: 423 AMDEPMPSGKTLRQVALEQIGKVKFYPQSGINRLTSMIENRPDWCISRQRDWGVPIAFFR 482
Query: 1228 DGDTI--IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I +E + + + G D WW + + +LL
Sbjct: 483 DKSTKEPIFDEKILNNIYEIFKAKGADAWWQMEISELL 520
>gi|228476843|ref|ZP_04061488.1| isoleucine-tRNA ligase [Streptococcus salivarius SK126]
gi|228251417|gb|EEK10562.1| isoleucine-tRNA ligase [Streptococcus salivarius SK126]
Length = 932
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/641 (33%), Positives = 330/641 (51%), Gaps = 54/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G + +VA L+ +L F TD++V+ + G+ L I HP + E
Sbjct: 247 ADIEYVLVKPAGEDRKFVVASELLNSLSEKFGWTDVEVLQSYRGEELNQIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMAEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + + + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDTTN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +T +++ R VD YM R + T+
Sbjct: 635 MDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVKTIRD 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ + L+NF+ ELSAFY KD +Y +S R ++I + +
Sbjct: 695 AYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIA 1040
+ PI+PH AEE++S+L + +++G A
Sbjct: 755 LLTPILPHTAEEIWSYLEFETEDYVQLSELPEAEEFAGQDA 795
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 225/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G YVPG
Sbjct: 34 AKMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G + +VA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGEDRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD+EV+ + G+ L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVEVLQSYRGEELNQIVTEHPWDTEVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L +EHG WW + LL
Sbjct: 469 EDKTPIMAEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|293366842|ref|ZP_06613518.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|291319143|gb|EFE59513.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
Length = 916
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ I HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFIEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGF +D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFFMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 226/385 (58%), Gaps = 18/385 (4%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGWD HGLPIE +A+T K
Sbjct: 50 FILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKK 108
Query: 81 D---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y T EY Q+ F
Sbjct: 109 GVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPYITLTPEYEAAQIRLF 167
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGAT 197
+ + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ + + +
Sbjct: 168 GEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DS 223
Query: 198 DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTFQTDI 253
D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L W + I
Sbjct: 224 DAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALSEEVAEALGWD-KDSI 282
Query: 254 EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA 313
++ +F G+ L+ I HP R ++ V++ GTG VH AP HG+DD+++
Sbjct: 283 QLEKEFTGKELEFIEAQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQK 340
Query: 314 EKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWR 372
+PV++ + ++G ++ + GP EG+ K L E D L ++ HSYP+DWR
Sbjct: 341 YDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWR 399
Query: 373 TKKPVILKASQQWFIDTERIKPEAL 397
TKKPVI +A+ QWF +++ + L
Sbjct: 400 TKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|420177416|ref|ZP_14683752.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM057]
gi|420179258|ref|ZP_14685553.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM053]
gi|394247800|gb|EJD93042.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM057]
gi|394254064|gb|EJD99046.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM053]
Length = 916
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ + V++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLLVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 229/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 EEVAEALGWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ + V++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLLVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|262276791|ref|ZP_06054584.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114]
gi|262223894|gb|EEY74353.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114]
Length = 918
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 217/626 (34%), Positives = 332/626 (53%), Gaps = 57/626 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKL-NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALA++E+EY+ DHIS IY+K +L NQ H +L+ +IWTTTPW++P N+ +A
Sbjct: 193 ATALADAEVEYQ-DHISNQIYVKFQLKNQFRGH-----DNLNVIIWTTTPWTIPCNRALA 246
Query: 476 FNPALEYSVASVKGAN-VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK-- 532
+N LEY + + + I+AK L EN + +V F G L+ HP +
Sbjct: 247 YNSNLEYGIYENENKDKFIIAKDLFENFVTAIKKKPKLVETFNGSELKGFNANHPFHDLG 306
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ D+ LL A FV+ +GTG+VH AP+HG DDF L L I N I + G Y+
Sbjct: 307 YKFDVPLLEADFVTIDQGTGIVHVAPSHGPDDFALGLKNGIKAENTIDDNGYYTK-IIKN 365
Query: 593 LEGLNILGDGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTERI 649
EGL+I K + L + +++T Y+HSYP+ WR+K P++ +A+ QWFI D ++
Sbjct: 366 FEGLHIFKADKVIIDELEKLHKLVYTAEYKHSYPHSWRSKAPLVHRATPQWFISMDKNQL 425
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEA 707
+ +AL +E +F P K + I RP WCISRQR WGVP+P+F + T IV+E
Sbjct: 426 RKKALESIEATDFYPPIGKNRIHGMIETRPDWCISRQRFWGVPLPIFINKKTHEPIVDEN 485
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
+ + G D W+ L ++ K DI+++WFDSG + ++VL+++
Sbjct: 486 VNQRIYEIFKAEGSDAWYKRDKSDFLGKKYNVNDFAKVEDIVEVWFDSGSTHTYVLENRQ 545
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SSLL SV + AP++++ HGFVVD KG KMSKS+GNV
Sbjct: 546 DLKWPADMYLEGSDQHRGWFHSSLLHSVGTRGNAPYKSILTHGFVVDGKGQKMSKSLGNV 605
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
++ +I + GVD+LR WV A + + I
Sbjct: 606 VAPEEI-----------------------------IKKNGVDILRLWVVA-SDYSEDLRI 635
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHN--HSESTGSIS----RYVDVYMLKRLCEFQNT 936
++I++ + +KIR++LR+LLG + + E +I +D ++L ++ E
Sbjct: 636 DQSIISQHSESYRKIRNTLRFLLGNIFDDFSFEEVENIKVVNLDIIDSFILNKISELDEK 695
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ + + LLNF ELS+ YF + KD LYCD + RL+ ++ L
Sbjct: 696 FYIYSKQNDFHKIYVELLNFCTIELSSLYFDIRKDTLYCDDLTYIKRLNCINILKIALLF 755
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGT 1022
L++ + PI+ EEV+ L S Q +
Sbjct: 756 LMKWLNPILSFTIEEVFQILRSNQNS 781
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/405 (39%), Positives = 228/405 (56%), Gaps = 21/405 (5%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY R +G+ +FILHDGPPYANG HIG A+NKILKDI ++ + GK Y+PGW
Sbjct: 34 DLYKKIRSKRSGREQFILHDGPPYANGNIHIGTALNKILKDIVIKFKSIDGKDCPYIPGW 93
Query: 66 DCHGLPIELK------AITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIE K K S LD R + + FA E I QK +F+ GV DWE
Sbjct: 94 DCHGLPIEWKIEEQNKKKGINKKNTSILDFRNQCREFAKEWIEIQKNQFKRLGVFGDWE- 152
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
N Y T + + K +Y+ KPV WS TALA++E+EY+ DH+S I
Sbjct: 153 NYYATMSNDAEAQIAIEILRFLKNGGLYKGYKPVLWSVVEATALADAEVEYQ-DHISNQI 211
Query: 180 YLKIKL-NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VIV 237
Y+K +L NQ H +L+ +IWTTTPW++P N+ +A+N LEY + + + I+
Sbjct: 212 YVKFQLKNQFRGH-----DNLNVIIWTTTPWTIPCNRALAYNSNLEYGIYENENKDKFII 266
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINK--EQRDLKLLPAGFVSSSKGTG 295
AK L E+ + ++V F G L+ HP + + D+ LL A FV+ +GTG
Sbjct: 267 AKDLFENFVTAIKKKPKLVETFNGSELKGFNANHPFHDLGYKFDVPLLEADFVTIDQGTG 326
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE- 354
+VH AP+HG DDF L L I N I + G Y+ EGL+I K + L +
Sbjct: 327 IVHVAPSHGPDDFALGLKNGIKAENTIDDNGYYTK-IIKNFEGLHIFKADKVIIDELEKL 385
Query: 355 PDVLWTENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
+++T Y+HSYP+ WR+K P++ +A+ QWFI D +++ +AL
Sbjct: 386 HKLVYTAEYKHSYPHSWRSKAPLVHRATPQWFISMDKNQLRKKAL 430
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE-PDVLWTENYQHSYPYDWRTKKPVI 1165
N I + G Y+ EGL+I K + L + +++T Y+HSYP+ WR+K P++
Sbjct: 351 NTIDDNGYYTK-IIKNFEGLHIFKADKVIIDELEKLHKLVYTAEYKHSYPHSWRSKAPLV 409
Query: 1166 LKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+A+ QWFI D +++ +AL +E +F P K + I RP WCISRQR WGVP+
Sbjct: 410 HRATPQWFISMDKNQLRKKALESIEATDFYPPIGKNRIHGMIETRPDWCISRQRFWGVPL 469
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
P+F + T IV+E + + G D W+
Sbjct: 470 PIFINKKTHEPIVDENVNQRIYEIFKAEGSDAWY 503
>gi|260102621|ref|ZP_05752858.1| isoleucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
gi|260083575|gb|EEW67695.1| isoleucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
Length = 927
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 325/621 (52%), Gaps = 63/621 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V +VA L+ E + W D VV G ++ + HPI +
Sbjct: 248 PKFDYSVVQVGDKRYVVASGLLDKVAEEIGWD---DYKVVQTVKGADMEYMKAKHPIYDK 304
Query: 534 QRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ L+ GF V+ GTGLVH AP G+DDF + +P+ + + G Y+ D P
Sbjct: 305 E---SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQRYNLPIFSPVDAHGCYT-DEVPE 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L+G+ K V L + L + + HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 361 LKGMFYQDVDKLMVQKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIAPFRD 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
+ L +E+ +F+P K L + I R W ISRQR WGVP+P+FY D T IV I+
Sbjct: 421 QILDQIEKASFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIE 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H + ++ G + W++ + ++LL + N TK DILD+WFDSG SWS V++
Sbjct: 481 HIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEK 540
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+G
Sbjct: 541 RDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGQAPYKQVLSQGFVLDDKGHKMSKSLG 600
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPT 879
NVIS +D+ KK+ G +++R WVA A + D
Sbjct: 601 NVISPNDVI---KKM--------------------------GAEIIRLWVAQADTTSDVA 631
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V +G IL S + +KIR++ RY+L + ++ R VD YM +L +
Sbjct: 632 VSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYDDLRSVDQYMEVKLNDLIK 689
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y +F + + + NF+ N+LSAFY KD LY + N AR S +++
Sbjct: 690 ECLAAYDKFDFTTVFKKVFNFISNDLSAFYLDFAKDVLYIEVENSHARHSMQTVIYDAAV 749
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++ L
Sbjct: 750 KLAKILTPILPHTMEEIWGFL 770
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 219/391 (56%), Gaps = 21/391 (5%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN GKP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 34 NKLYE-QRLKLNEGKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E + Q +F+ GV+ADW+H
Sbjct: 93 GWDTHGLPVEQQLAKKGVDRKTMDRAKYRELCRQYAEEQVQKQMTDFKRLGVMADWDH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITLQHDFEAQEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + D + +IWTTTPW++PAN+ I NP +YSV V +VA L
Sbjct: 211 AFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKRYVVASGL 268
Query: 242 V----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGL 296
+ E + W D +VV G ++ + HPI ++ L+ GF V+ GTGL
Sbjct: 269 LDKVAEEIGW---DDYKVVQTVKGADMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGL 322
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP G+DDF + +P+ + + G Y+ D P L+G+ K V L +
Sbjct: 323 VHTAPGFGEDDFNVGQRYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAG 381
Query: 357 VLWT-ENYQHSYPYDWRTKKPVILKASQQWF 386
L + + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 382 ALLKLKVFTHSYPHDWRTKKPVIFRATTQWF 412
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 1100 FKVYHHLNL-----ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHS 1153
F V NL + G Y+ D P L+G+ K V L + L + + HS
Sbjct: 334 FNVGQRYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAGALLKLKVFTHS 392
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YP+DWRTKKPVI +A+ QWF + + L +E +F+P K L + I R W I
Sbjct: 393 YPHDWRTKKPVIFRATTQWFASIAPFRDQILDQIEKASFIPSWGKTRLYNMIKDRGDWVI 452
Query: 1214 SRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
SRQR WGVP+P+FY D T IV I+H + ++ G + W++ ++LL
Sbjct: 453 SRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSNAWYTHTAKELL 503
>gi|357033031|ref|ZP_09094963.1| isoleucyl-tRNA synthetase [Gluconobacter morbifer G707]
gi|356413391|gb|EHH67046.1| isoleucyl-tRNA synthetase [Gluconobacter morbifer G707]
Length = 952
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 218/638 (34%), Positives = 333/638 (52%), Gaps = 78/638 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL--NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+E+EY D S +I++ + + PAH L G + A+IWTTTPW++PAN+ +A
Sbjct: 212 TALAEAEIEYH-DIDSTTIFVAFPIIKDPTPAHALTGVS---AVIWTTTPWTIPANRALA 267
Query: 476 FNPALEYSVASV----------KGANVIVAKCLVENLKWTFQTDI---DVVCDFPGQYLQ 522
+ P + Y V V +GA +++A+ VE + +T I +++ PG L+
Sbjct: 268 YGPDITYVVLRVDETNENSLVPQGAKLLIAEERVE--AFCAETGIVAHNILYTLPGSALK 325
Query: 523 DITYIHPINKE--QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLIT 580
HP+ + D+ +LP FV++ GTGLVH AP+HGQDDFLL I V L+
Sbjct: 326 GAVCAHPLRGRGYEYDVPMLPGDFVTTDAGTGLVHMAPSHGQDDFLLCREYGIEVPELVQ 385
Query: 581 NQGKYSPDAGPGLEGL----------NILGDGKDQVLHLVEP--DVLWTENYQHSYPYDW 628
+ G+Y+P P LEG+ ++L + + H P ++ +HSYP+ W
Sbjct: 386 DDGRYAPWV-PHLEGIHVFKAADPVCDLLTEARQTAEHDGAPPTGLMGRSTVRHSYPHSW 444
Query: 629 RTKKPVILKASQQWFIDTE---RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISR 685
R+K P+I +A+ QWFI + ++ +AL+ L+ V FVPE+A++ L I QRP WCISR
Sbjct: 445 RSKAPIIFRATPQWFIAMDGQTHLREKALSALDNVTFVPEAARRRLTSMIEQRPDWCISR 504
Query: 686 QRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT 743
QR WGVPI VF + T ++ + A ++ HG D W+S L +
Sbjct: 505 QRAWGVPIAVFVEKRTGEVLRDAAVMQRIVDAFRTHGADIWYSADPATFLGPDRNAEDYE 564
Query: 744 KSNDILDIWFDSGISWSHVLKDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFR 799
+ DI+D+WF+SG S L + PA VY+EG DQ GWF SSLL SV AP+R
Sbjct: 565 QVFDIVDVWFESGSSHRFDLGQEGLNFPADVYLEGSDQHRGWFQSSLLESVGTLGVAPYR 624
Query: 800 NVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLP 859
+ +GFV+DE+G KMSKS+GNV++ D+T+
Sbjct: 625 ALVTNGFVLDEQGRKMSKSLGNVVAPKDVTE----------------------------- 655
Query: 860 AYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG--- 916
G D+LR WV ++ + + IG IL + +++R++LR+LLG L +E
Sbjct: 656 KLGADILRLWV-LNSDTNEDLRIGNEILKQQGELYRRLRNTLRWLLGALDGFTEEEAVPY 714
Query: 917 SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCD 976
+ ++ Y+L RL E + + Q+ L F +LSAFYF + KD +YCD
Sbjct: 715 AELPPLEQYILHRLSELRGLISRAVETHQWVGVYPALHGFCTTDLSAFYFDIRKDAIYCD 774
Query: 977 SINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
+++ R + L + L +AP++ AEE +
Sbjct: 775 ALSDPTRCAARTVLDILHRALCTWLAPVLVFTAEEAWG 812
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 229/411 (55%), Gaps = 43/411 (10%)
Query: 12 REALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLP 71
R+A G+P F LHDGPPYANG HIGHA+NKI+KD+ R++ + G V Y+PGWDCHGLP
Sbjct: 58 RDAGKGRPVFTLHDGPPYANGHIHIGHALNKIMKDVINRAHRMSGFEVRYLPGWDCHGLP 117
Query: 72 IELK-----AITSKDKLLSP-LDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTF 125
IE + KDK P L R + + +A E + Q +F+ GV A+W N Y T
Sbjct: 118 IEWRIEEQYRKAGKDKDQVPLLQFRAECRQYAAEWVQKQAEDFKRIGVQAEWT-NRYVTM 176
Query: 126 DKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL 185
D + + +YR L+PV WSP +TALAE+E+EY D S +I++ +
Sbjct: 177 DFGSEAKIVDEIGKFLLNGSLYRGLRPVMWSPVEKTALAEAEIEYH-DIDSTTIFVAFPI 235
Query: 186 --NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV----------KGA 233
+ PAH L G + A+IWTTTPW++PAN+ +A+ P + Y V V +GA
Sbjct: 236 IKDPTPAHALTGVS---AVIWTTTPWTIPANRALAYGPDITYVVLRVDETNENSLVPQGA 292
Query: 234 NVIVAKCLVESLKWTFQTDI---EVVCDFPGQYLQDITYIHPINKE--QRDLKLLPAGFV 288
+++A+ VE+ +T I ++ PG L+ HP+ + D+ +LP FV
Sbjct: 293 KLLIAEERVEAF--CAETGIVAHNILYTLPGSALKGAVCAHPLRGRGYEYDVPMLPGDFV 350
Query: 289 SSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL--------- 339
++ GTGLVH AP+HGQDDFLL I V L+ + G+Y+P P LEG+
Sbjct: 351 TTDAGTGLVHMAPSHGQDDFLLCREYGIEVPELVQDDGRYAPWV-PHLEGIHVFKAADPV 409
Query: 340 -NILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFI 387
++L + + H P ++ +HSYP+ WR+K P+I +A+ QWFI
Sbjct: 410 CDLLTEARQTAEHDGAPPTGLMGRSTVRHSYPHSWRSKAPIIFRATPQWFI 460
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 18/167 (10%)
Query: 1107 NLITNQGKYSPDAGPGLEGL----------NILGEGKDQVLHLVEP--DVLWTENYQHSY 1154
L+ + G+Y+P P LEG+ ++L E + H P ++ +HSY
Sbjct: 382 ELVQDDGRYAPWV-PHLEGIHVFKAADPVCDLLTEARQTAEHDGAPPTGLMGRSTVRHSY 440
Query: 1155 PYDWRTKKPVILKASQQWFIDTE---RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
P+ WR+K P+I +A+ QWFI + ++ +AL+ L+ V FVPE+A++ L I QRP W
Sbjct: 441 PHSWRSKAPIIFRATPQWFIAMDGQTHLREKALSALDNVTFVPEAARRRLTSMIEQRPDW 500
Query: 1212 CISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWS 1256
CISRQR WGVPI VF + T ++ + A ++ HG D W+S
Sbjct: 501 CISRQRAWGVPIAVFVEKRTGEVLRDAAVMQRIVDAFRTHGADIWYS 547
>gi|385826105|ref|YP_005862447.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
gi|329667549|gb|AEB93497.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
Length = 928
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 326/623 (52%), Gaps = 66/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V G ++ + E+L W D VV G +TY HP+
Sbjct: 247 PKFDYSVVEVNGKKYVIGSQRLSAVAEDLGWE---DYKVVKTLKGTDFDRMTYQHPL--- 300
Query: 534 QRDLK--LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-G 590
D+ ++ +V++ GTGLVH A G+DD+ + +PV + + QG+++ +
Sbjct: 301 -YDVTGLVMNDTYVTADDGTGLVHNATGFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPD 359
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF ++
Sbjct: 360 PDLVGM-FYDDANKVVADKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASIDK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEA 707
+ + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 419 FRDQILAEIEKANFIPAWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVTPE 478
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I+H + ++ G + W++ + E+LL + N K DILD+WFDSG SW+ V
Sbjct: 479 TIEHVAQIFEKEGSNAWYTYTAEELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWAGV 538
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
++++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSK
Sbjct: 539 MQERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSK 598
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI S +D+ + G +++R WVA A
Sbjct: 599 SLGNVI-----------------------SPNDV------IKQMGAEIIRLWVAG-ADTT 628
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + ++IL S + +KIR+++R++L + +I+ VD YM +L
Sbjct: 629 SDVAVSQDILRQSAESYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIKLNRL 688
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y +F + + + +F+ N+LSAFY KD LY D+ + E R S ++++
Sbjct: 689 IEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTVIYDV 748
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EEV+ +L
Sbjct: 749 LVKLTKLMTPILPHTMEEVWGYL 771
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 221/415 (53%), Gaps = 25/415 (6%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA E + Q A+F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 158 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +YSV V G ++ + E
Sbjct: 217 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYSVVEVNGKKYVIGSQRLSAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK--LLPAGFVSSSKGTGLVHCAP 301
L W D +VV G +TY HP+ D+ ++ +V++ GTGLVH A
Sbjct: 274 DLGW---EDYKVVKTLKGTDFDRMTYQHPL----YDVTGLVMNDTYVTADDGTGLVHNAT 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--DVL 358
G+DD+ + +PV + + QG+++ + P L G+ D V +E +L
Sbjct: 327 GFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPDPDLVGM-FYDDANKVVADKLEKAGALL 385
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+ HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 386 KLSFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTR 440
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 390 FTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTRLYNMIKDRG 449
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ E+LL
Sbjct: 450 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTYTAEELL 504
>gi|340355067|ref|ZP_08677760.1| isoleucine--tRNA ligase [Sporosarcina newyorkensis 2681]
gi|339622748|gb|EGQ27262.1| isoleucine--tRNA ligase [Sporosarcina newyorkensis 2681]
Length = 919
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 328/622 (52%), Gaps = 56/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D S SIY+ + L E D+ LIWTTTPW++PAN I+ +
Sbjct: 191 SALAEAEIEYK-DKKSPSIYVSFPVRDGKGVLAE---DVKFLIWTTTPWTIPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
PA Y+V +V G ++VAK LVE L + + + + PG L I HP RD
Sbjct: 247 PAFTYAVVNVNGEKLVVAKELVEFLAKELEWENYSIEQELPGADLDRIVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HG+DDF ++ + I L+ I ++G + +A P G+
Sbjct: 305 SLIMLGEHVTADAGTGCVHTAPGHGEDDFYVSKSYGIDALSPINDRGVMTEEA-PYFAGM 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L ++ HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 364 FYEDANKAVTEKLEEVGALKKLSFITHSYPHDWRTKKPVIFRATAQWFASIELFRSDLLE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ F P + L + + R WCISRQRVWGVPIPVFY +GD I+ +E I H
Sbjct: 424 AIRNTKFTPSWGETRLFNMVRDRGDWCISRQRVWGVPIPVFYAENGDAILTDET-ISHVA 482
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L E+G + W+ + ++LL + N TK DI+D+WFDSG + VL+++
Sbjct: 483 KLFREYGSNVWFERTAKELLPEGFTHEGSPNGEFTKEMDIMDVWFDSGTTHQGVLEERDD 542
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL TSVA+ AP++ + HGF +D+ G KMSKS+GNVI
Sbjct: 543 LVYPADLYLEGSDQYRGWFNSSLTTSVAINGIAPYKGLLSHGFTLDKDGRKMSKSLGNVI 602
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+PA K + G D++R WV++ V +
Sbjct: 603 -----------VPA------------------KVINQLGADIVRLWVSS-VDYTADVRVS 632
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+ + +KIR+++R+L G + + S +S R VD Y+ +L + + T
Sbjct: 633 DSNFKQVSEVYRKIRNTIRFLHGNVADFDPSADRVSFEEMRPVDQYVYVKLQDLIKEVRT 692
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +++A + NF LS+FY + KD +Y + +N R + +++ L++
Sbjct: 693 AYDHYEFAGVYHAVNNFCTGVLSSFYLDIAKDVVYIEGVNHPHRRAMQTVMYDTLITLVK 752
Query: 1000 TVAPIMPHLAEEVYSHLPSRQG 1021
+ PI+PH A+E++++L ++
Sbjct: 753 LITPILPHTADEMWNYLNVKEA 774
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 232/396 (58%), Gaps = 14/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E G+P F+LHDGPPYANG H+GHA+NK+LKDI +R + G YVPGWD
Sbjct: 36 IYQKVQERTAGRPFFVLHDGPPYANGDLHMGHALNKVLKDIIVRYKSMSGFHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+ +K K +S + RK +++A E IN Q+ +F+ GV DWE N Y
Sbjct: 96 THGLPIE-QALVNKGVDRKKMSVAEFRKMCEDYAYEQINNQRTQFKRLGVRGDWE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T E+ Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EYK D S SIY+
Sbjct: 154 TLKPEFESRQIQVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYK-DKKSPSIYVSF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ L E D+ LIWTTTPW++PAN I+ +PA Y+V +V G ++VAK LVE
Sbjct: 213 PVRDGKGVLAE---DVKFLIWTTTPWTIPANLGISVHPAFTYAVVNVNGEKLVVAKELVE 269
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
L + + + + PG L I HP RD ++ V++ GTG VH AP
Sbjct: 270 FLAKELEWENYSIEQELPGADLDRIVAKHPFY--DRDSLIMLGEHVTADAGTGCVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 362
HG+DDF ++ + I L+ I ++G + +A P G+ K L E L +
Sbjct: 328 HGEDDFYVSKSYGIDALSPINDRGVMTEEA-PYFAGMFYEDANKAVTEKLEEVGALKKLS 386
Query: 363 Y-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF E + + L
Sbjct: 387 FITHSYPHDWRTKKPVIFRATAQWFASIELFRSDLL 422
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKPVI +A+ QWF E + + L + F P + L + + R W
Sbjct: 390 HSYPHDWRTKKPVIFRATAQWFASIELFRSDLLEAIRNTKFTPSWGETRLFNMVRDRGDW 449
Query: 1212 CISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
CISRQRVWGVPIPVFY +GD I+ +E I H L E+G + W+ ++LL
Sbjct: 450 CISRQRVWGVPIPVFYAENGDAILTDE-TISHVAKLFREYGSNVWFERTAKELL 502
>gi|385812133|ref|YP_005848524.1| hypothetical protein LC40_0407 [Lactobacillus fermentum CECT 5716]
gi|299783032|gb|ADJ41030.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716]
Length = 930
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 324/618 (52%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ Q LL+ +D + + WTTTPW++PA++ +A +
Sbjct: 191 SALAEAEVEYH-DVVAKTAFFTEQV-QDGKGLLD--SDTYLVGWTTTPWTIPASEAVAVS 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
EY++ G++ +VA L+ +L F TD VV F G ++ +T HP
Sbjct: 247 ADFEYALVQPSGSDRKYVVAASLLGDLAQKFNWTDYQVVKTFKGAEMEGMTTKHPYI--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R+L + A +V+ GTGLVH AP +G DD+ +P+ + +QG + + GP +
Sbjct: 305 RELLVGLADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIFAPMNDQGVLTAENGPEFD 364
Query: 595 GLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D D L L+E +L E+ +HSYP+DWRTKKP++ +A+ QWF+ ++++ E
Sbjct: 365 GV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDE 423
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L ++EV + P K LR+ + R W ISRQRVWGVP+P+FY D T I+ E I H
Sbjct: 424 ILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIFYAEDGTPIMTEETINH 483
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L E+G + W+ + LL + N TK DI+D+WFDSG S VL ++
Sbjct: 484 VSDLFREYGSNVWFDREAKDLLPAGFTSEHSPNGKFTKETDIMDVWFDSGSSHQGVLAER 543
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSV + AP+++V GF +D+ G KMSKS+GN
Sbjct: 544 DYLTYPADMYLEGSDQYRGWFNSSLITSVVVSGHAPYKSVLSQGFTLDQSGKKMSKSLGN 603
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + + G +++R WV + A V
Sbjct: 604 VIDPNKVVK-----------------------------QMGAEIIRLWVMS-ADTSADVR 633
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYVDVYMLKRLCEFQNTMD 938
+ L + +K+R++ R+LL + VD YM F M
Sbjct: 634 VSMETLQQIAESYRKLRNTFRFLLANTSDFGPENFVAYEKREAVDQYMTVNFNRFLAGMR 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ + + A + L+NFV N+LS+FY + KD LY + + R S T + I L
Sbjct: 694 DEFDRYDFLNAYKHLINFVNNDLSSFYMNVAKDVLYIEPEDSHVRRSMQATFYEILSGLT 753
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EEV+S++
Sbjct: 754 KLLTPILPHTTEEVWSYM 771
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 232/395 (58%), Gaps = 16/395 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPSFVLHDGPPYANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + R + +ALE + QK F+ GV +W+H Y T K
Sbjct: 99 LPIEHQLTKAGYDRKKMSLTEFRDLCQKYALEQVEIQKKGFKRLGVAGEWDH-PYLTLAK 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++ Q
Sbjct: 158 EFEAAQIKVFGAFAKRGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFTEQV-Q 215
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESL 245
LL+ +D + + WTTTPW++PA++ +A + EY++ G++ +VA L+ L
Sbjct: 216 DGKGLLD--SDTYLVGWTTTPWTIPASEAVAVSADFEYALVQPSGSDRKYVVAASLLGDL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F TD +VV F G ++ +T HP R+L + A +V+ GTGLVH AP +G
Sbjct: 274 AQKFNWTDYQVVKTFKGAEMEGMTTKHPYI--DRELLVGLADYVTDDAGTGLVHTAPGYG 331
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTEN 362
DD+ +P+ + +QG + + GP +G+ D D L L+E +L E+
Sbjct: 332 DDDYNFGKKYNLPIFAPMNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEED 390
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+HSYP+DWRTKKP++ +A+ QWF+ ++++ E L
Sbjct: 391 LEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDEIL 425
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ +QG + + GP +G+ + D L L+E +L E+ +HSYP+DWRTKKP++
Sbjct: 349 MNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ ++++ E L ++ V + P K LR+ + R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIDKMRDEILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L E+G + W+ + LL
Sbjct: 468 YAEDGTPIMTEETINHVSDLFREYGSNVWFDREAKDLL 505
>gi|392407273|ref|YP_006443881.1| isoleucyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620409|gb|AFM21556.1| Isoleucyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 928
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/625 (34%), Positives = 334/625 (53%), Gaps = 54/625 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA +E+EY+ D S SIY+ LN+ L G + +A+IWTTTPW+LPA+ IA +
Sbjct: 194 TALAAAEIEYE-DIYSPSIYVAYPLNKDDFAFLNG-REAYAIIWTTTPWTLPASLAIAVH 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-VVCDFPGQYLQDITYIHPINKEQRD 536
P EY AS ++AK L++ ++ D V+ + G+ L+ +HP + R+
Sbjct: 252 PDFEYVFASCGDKIYLLAKGLMDKVQRDTGITFDSVLYEIKGKELEGRKAVHPFY-DDRE 310
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
+ + +VS G+G VH AP HG +DF + + + N + ++G + P+ P + GL
Sbjct: 311 ILFVLGEYVSLDDGSGCVHTAPGHGVEDFETGVKYSLEIYNPVDDKGYFLPET-PIVGGL 369
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L DG +VL +++ +L HSYP+ WR KKPVI +A+ QWFI + K ++L
Sbjct: 370 S-LDDGSRKVLEILKKSGRLLGEGKIMHSYPHCWRCKKPVIFRATNQWFIAVSQFKEDSL 428
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHF 712
+ V ++P ++ + + + R WCISRQR+WGVPIP FY D +I+ I+
Sbjct: 429 RAISSVQWIPSWGQERIANMVRDRSDWCISRQRIWGVPIPAFYCNDCGELILTSDRIRKV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDKP 767
+ E+G D WW + E+LL+ + ++ K DI D+WFDSG S VL +P
Sbjct: 489 SAKVREYGSDCWWQMKPEELLDELAFCPKCHSKSLRKETDIFDVWFDSGTSHLAVLTTRP 548
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF +SLLTSVA K APF V HGF+VD +G KMSKS+GNV
Sbjct: 549 ELKWPATMYLEGSDQHRGWFQTSLLTSVATKGRAPFEMVLTHGFIVDGEGRKMSKSLGNV 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ ++ + YG D+LR WVA+ ++ + I
Sbjct: 609 VQPQEVIE-----------------------------KYGADILRLWVASTDYRN-DIRI 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
+ IL + + ++IR+++RY+LG L + S+ +D+++L +L + +
Sbjct: 639 SETILKNLVESYRRIRNTMRYMLGNLSDFDPHKDSLPPDEMEEMDLWILSKLQGVISKVT 698
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ F++ + + F VNELSAFY + KDRLY ++ N + R S + I L
Sbjct: 699 KGFENFEFHVPTFTIHQFCVNELSAFYLDVNKDRLYVEAANSKLRRSCQTAMWVIAKTLT 758
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTF 1023
+ ++PI+ AEEV+ +L T
Sbjct: 759 QMLSPILSFTAEEVWQYLRQIDATL 783
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 225/388 (57%), Gaps = 12/388 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
G FILHDGPPYANG HIG A NKILKD+ + ++G YVPGWD HGLPIEL+
Sbjct: 47 KGAEHFILHDGPPYANGNIHIGTAFNKILKDMIPKYKWMRGYFSPYVPGWDTHGLPIELR 106
Query: 76 AITSK--DK-LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKN 132
+ + DK L P ++R K K +A I+ Q+ EF+ GV+ DW+ + Y TF EY
Sbjct: 107 TLKDEGVDKDSLHPTELRAKCKAYAERFIDIQREEFKRLGVVGDWD-DPYITFKPEYEAI 165
Query: 133 QLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL 192
+L F + + Y+YR KP+YW TALA +E+EY+ D S SIY+ LN+
Sbjct: 166 ELEAFAEMVDRGYVYRGQKPIYWCTDCETALAAAEIEYE-DIYSPSIYVAYPLNKDDFAF 224
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW-TFQT 251
L G + +A+IWTTTPW+LPA+ IA +P EY AS ++AK L++ ++ T T
Sbjct: 225 LNG-REAYAIIWTTTPWTLPASLAIAVHPDFEYVFASCGDKIYLLAKGLMDKVQRDTGIT 283
Query: 252 DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 311
V+ + G+ L+ +HP + R++ + +VS G+G VH AP HG +DF
Sbjct: 284 FDSVLYEIKGKELEGRKAVHPFY-DDREILFVLGEYVSLDDGSGCVHTAPGHGVEDFETG 342
Query: 312 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPY 369
+ + + N + ++G + P+ P + GL+ L DG +VL +++ +L HSYP+
Sbjct: 343 VKYSLEIYNPVDDKGYFLPET-PIVGGLS-LDDGSRKVLEILKKSGRLLGEGKIMHSYPH 400
Query: 370 DWRTKKPVILKASQQWFIDTERIKPEAL 397
WR KKPVI +A+ QWFI + K ++L
Sbjct: 401 CWRCKKPVIFRATNQWFIAVSQFKEDSL 428
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 94/162 (58%), Gaps = 6/162 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPV 1164
N + ++G + P+ P + GL+ L +G +VL +++ +L HSYP+ WR KKPV
Sbjct: 351 NPVDDKGYFLPET-PIVGGLS-LDDGSRKVLEILKKSGRLLGEGKIMHSYPHCWRCKKPV 408
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWFI + K ++L + V ++P ++ + + + R WCISRQR+WGVPIP
Sbjct: 409 IFRATNQWFIAVSQFKEDSLRAISSVQWIPSWGQERIANMVRDRSDWCISRQRIWGVPIP 468
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
FY D +I+ I+ + E+G D WW + E+LL+
Sbjct: 469 AFYCNDCGELILTSDRIRKVSAKVREYGSDCWWQMKPEELLD 510
>gi|156846274|ref|XP_001646025.1| hypothetical protein Kpol_1031p75 [Vanderwaltozyma polyspora DSM
70294]
gi|156116696|gb|EDO18167.1| hypothetical protein Kpol_1031p75 [Vanderwaltozyma polyspora DSM
70294]
Length = 1022
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 228/663 (34%), Positives = 335/663 (50%), Gaps = 91/663 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----------------NQVPAHLLEGATDLHALIW 461
TALAESELEY H+S++ Y++ L N++P+H+ + +++ LIW
Sbjct: 233 TALAESELEYNEKHVSRAAYVRFPLTENSKNQFVSKIKQHSNELPSHI-DNIENIYCLIW 291
Query: 462 TTTPWSLPANQFIAFNPALEYSVAS-VKGAN--VIVAKCL---VENLKWTFQTDIDVVCD 515
T+TPW+L +N+ I++N Y + S + +N IV K L VE+LK V+C+
Sbjct: 292 TSTPWTLFSNRAISYNKNFNYVLISHTENSNDLTIVEKTLFNQVESLK-----GYQVICE 346
Query: 516 FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPV 575
PG +L+DI Y +P+ ++ LL V++S GTGLVH AP HG DD++L + ++ +
Sbjct: 347 IPGVFLEDIKYHNPLIADEISRPLLHGDHVTNSTGTGLVHTAPGHGADDYMLGVKNELEI 406
Query: 576 LNLITNQGKYSPDAGPG-LEGLNILGDGK-----------DQVLHLVEPDVLWTE--NYQ 621
+ + N+G+Y P L L + + K D +L L+ + +Y
Sbjct: 407 YSPVNNRGEYDLKQIPNHLHSLLTVPESKKSRNVLDKNTTDVILELLSKCGMLVNHHSYT 466
Query: 622 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYW 681
HSYPYDWR+KKP+I++A+ QWF D +K AL LE V F P K L I R W
Sbjct: 467 HSYPYDWRSKKPIIIRATPQWFADLSDVKTNALNSLESVEFFPRRGKNRLSAFIRGRNEW 526
Query: 682 CISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLN---- 734
CISRQR WGVPIP FY D + ++++ I+H I G + W+S S E +
Sbjct: 527 CISRQRYWGVPIPAFYRKDDPEHALISDEIIEHAINTISRKGINSWFSPSEEDGSDMVEW 586
Query: 735 ----TSDVNSNVTKSNDILDIWFDSGISWSHV---------LKDKP---AHVYMEGMDQI 778
SDV + + D +D+WFDSG +W + L P + +Y+EG DQ
Sbjct: 587 LPPSMSDVANQYIRGKDTMDVWFDSGSAWKDMERFYKEVLNLAKTPQLLSDIYLEGSDQH 646
Query: 779 NGWFMSSLLTSVALKHT--APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLP 836
GWF SSLLT VA H APF+ + HGF +DE G KMSKS+GN IS I +G KL
Sbjct: 647 RGWFQSSLLTKVADSHQSIAPFKTLITHGFTLDENGIKMSKSIGNTISPKAIIEGNDKL- 705
Query: 837 AYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQK 896
LPA G D LR+ V + V G ++ + ++K
Sbjct: 706 --------------------NLPALGTDGLRYLVCQTDFTNDIVA-GPLVMTHVAEALKK 744
Query: 897 IRSSLRYLLGVLHNHSESTGSIS--RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLL 954
R + RYLLG L + + R +D Y++ L E D + ++ +++ +
Sbjct: 745 FRLTFRYLLGNLQTGNFKVMPFNELRRLDQYIISSLNELLQNSDKNFKDYNFSKVLSGIQ 804
Query: 955 NFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
+ N LSAFYF + KD LY D I+ R TL I +API P L ++ ++
Sbjct: 805 YHMNNHLSAFYFDISKDSLYSDHIDSLKRRQIQSTLFYIMDSYRSILAPITPILVQDAWN 864
Query: 1015 HLP 1017
+LP
Sbjct: 865 YLP 867
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/417 (38%), Positives = 247/417 (59%), Gaps = 47/417 (11%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
F++ DGPPYANG H GHA+NKILKD+ R NL++GK V++ GWDCHGLPIE+KA+
Sbjct: 90 FVIQDGPPYANGDLHFGHALNKILKDVLNRYNLIKGKYVYFRTGWDCHGLPIEMKALKEI 149
Query: 81 D----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
D + +SPL IR A + A + + +Q +F+ + ++ +W ++ Y T +Y +QL
Sbjct: 150 DPNKLETISPLKIRSIAASHAKKAVASQLKQFKDFAIMTNW-NDHYETVQPKYEIDQLKV 208
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL----------- 185
F+ +YK+ YI R KPV+W +RTALAESELEY HVS++ Y++ L
Sbjct: 209 FHQMYKRGYIRRQNKPVFWGTETRTALAESELEYNEKHVSRAAYVRFPLTENSKNQFVSK 268
Query: 186 -----NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVAS-VKGAN--VIV 237
N++P+H ++ +++ LIWT+TPW+L +N+ I++N Y + S + +N IV
Sbjct: 269 IKQHSNELPSH-IDNIENIYCLIWTSTPWTLFSNRAISYNKNFNYVLISHTENSNDLTIV 327
Query: 238 AKCL---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGT 294
K L VESLK +V+C+ PG +L+DI Y +P+ ++ LL V++S GT
Sbjct: 328 EKTLFNQVESLK-----GYQVICEIPGVFLEDIKYHNPLIADEISRPLLHGDHVTNSTGT 382
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-LEGLNILGDGK------- 346
GLVH AP HG DD++L + ++ + + + N+G+Y P L L + + K
Sbjct: 383 GLVHTAPGHGADDYMLGVKNELEIYSPVNNRGEYDLKQIPNHLHSLLTVPESKKSRNVLD 442
Query: 347 ----DQVLHLVEPDVLWTE--NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
D +L L+ + +Y HSYPYDWR+KKP+I++A+ QWF D +K AL
Sbjct: 443 KNTTDVILELLSKCGMLVNHHSYTHSYPYDWRSKKPIIIRATPQWFADLSDVKTNAL 499
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1149 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQR 1208
+Y HSYPYDWR+KKP+I++A+ QWF D +K AL LE V F P K L I R
Sbjct: 464 SYTHSYPYDWRSKKPIIIRATPQWFADLSDVKTNALNSLESVEFFPRRGKNRLSAFIRGR 523
Query: 1209 PYWCISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQ 1261
WCISRQR WGVPIP FY D + ++++ I+H I G + W+S P E+
Sbjct: 524 NEWCISRQRYWGVPIPAFYRKDDPEHALISDEIIEHAINTISRKGINSWFS-PSEE 578
>gi|425747153|ref|ZP_18865168.1| isoleucine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425484162|gb|EKU50575.1| isoleucine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 945
Score = 350 bits (899), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 221/633 (34%), Positives = 337/633 (53%), Gaps = 70/633 (11%)
Query: 417 GTALAESELEYKPDHISKSI---YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPA 470
G++LAE+E+EY+ D S +I + + L + L ++ ATD+ +IWTTTPW+LPA
Sbjct: 201 GSSLAEAEVEYE-DKKSDAIDVGFTVVDLKDLSTRLNVEVKDATDI--VIWTTTPWTLPA 257
Query: 471 NQFIAFNPALEYSVASV---KGA-NVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDIT 525
NQ +A + ++Y + V +G N I+AK LVE+ ++ + VV DF G ++++
Sbjct: 258 NQAVALHAEIDYQLVQVTTDRGTQNFILAKDLVESAIERYKLENPVVLADFKGAAIENLL 317
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
HP+ + R + ++ V ++ GTG VH AP HG DD+ + L ++ V N + G Y
Sbjct: 318 LQHPLLTD-RQVPVILGEHVIATSGTGAVHTAPGHGVDDYKVGLLYQLKVENPVGGNGVY 376
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI 644
P A P G +I + L LW +HSYP+ WR K P+I +A+ QWFI
Sbjct: 377 LPTA-PIFAGEHIYKANPQIIEALGAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFI 435
Query: 645 --DTERIKPEALACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
D ++ AL +E ++ FVP+ + ++ I RP WCISRQR WGVPIP F DT
Sbjct: 436 SMDANGLRQNALNAIENDIEFVPDWGQSRIQSMIEGRPDWCISRQRTWGVPIPFFVHKDT 495
Query: 702 IIVNEAN------IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDS 755
NE + I+ LI++ G D W++ + N N + D LD+WFDS
Sbjct: 496 ---NELHPRTPELIEEVAKLIEQEGIDGWYNREASDFIGADAENYNAIR--DTLDVWFDS 550
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G + VL+++ PA +Y+EG DQ GWF SSLLTS+A+ AP++ + HGFVVDE
Sbjct: 551 GTTHYAVLREREDLQDPADLYLEGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDE 610
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GN+I+ DI + G D LR+W+
Sbjct: 611 KGRKMSKSLGNIITPQDIIKD-----------------------------MGADGLRFWI 641
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYM 926
A+ A + GK I + + D ++IR++LR+LL L+ ST ++ +D Y+
Sbjct: 642 AS-ADYRYEMTAGKEIFSRASDGYRRIRNTLRFLLANLNGFKPSTDALPVDQLIALDQYI 700
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E Q T+ Y E + + L NF +N+L FY ++KDR Y + +AR S
Sbjct: 701 LQRAAEVQKTIQQAYEEMNFHIVTNALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSA 760
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
L++I +R +API+ A+E + +P +
Sbjct: 761 QTALYHIVQAFVRWMAPILSFTAQEAWPLIPEQ 793
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 225/408 (55%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R + GK +++LHDGPPYANG H+GHAVNK+LKDI ++S +L G YVPGWD
Sbjct: 46 IYQQIRASRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVLDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W ++LAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRALGAIAKAGHIEPGLKPVNWCMDCGSSLAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---KGA- 233
+ L + L ++ ATD+ +IWTTTPW+LPANQ +A + ++Y + V +G
Sbjct: 224 TVVDLKDLSTRLNVEVKDATDI--VIWTTTPWTLPANQAVALHAEIDYQLVQVTTDRGTQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + VV DF G ++++ HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAIERYKLENPVVLADFKGAAIENLLLQHPLLTD-RQVPVILGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L ++ V N + G Y P A P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLLYQLKVENPVGGNGVYLPTA-PIFAGEHIYKANPQIIEAL 399
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW +HSYP+ WR K P+I +A+ QWFI D ++ AL
Sbjct: 400 GAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDANGLRQNAL 447
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW +HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTA-PIFAGEHIYKANPQIIEALGAVGRLWAHQPIKHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D ++ AL +E + FVP+ + ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDANGLRQNALNAIENDIEFVPDWGQSRIQSMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN------IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT NE + I+ LI++ G D W++ + N N +
Sbjct: 487 IPFFVHKDT---NELHPRTPELIEEVAKLIEQEGIDGWYNREASDFIGADAENYNAIR 541
>gi|227514816|ref|ZP_03944865.1| hypothetical protein HMPREF0511_0936 [Lactobacillus fermentum ATCC
14931]
gi|227086806|gb|EEI22118.1| hypothetical protein HMPREF0511_0936 [Lactobacillus fermentum ATCC
14931]
Length = 930
Score = 350 bits (899), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 324/618 (52%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ Q LL+ +D + + WTTTPW++PA++ +A +
Sbjct: 191 SALAEAEVEYH-DVVAKTAFFTEQV-QDGKGLLD--SDTYLVGWTTTPWTIPASEAVAVS 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
EY++ G++ +VA L+ +L F TD VV F G ++ +T HP
Sbjct: 247 ADFEYALVQPSGSDRKYVVAASLLGDLAQKFNWTDYQVVKTFKGAEMEGMTTKHPYI--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R+L + A +V+ GTGLVH AP +G DD+ +P+ + +QG + + GP +
Sbjct: 305 RELLVGLADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIFAPMNDQGVLTAENGPEFD 364
Query: 595 GLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D D L L+E +L E+ +HSYP+DWRTKKP++ +A+ QWF+ ++++ E
Sbjct: 365 GV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDE 423
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L ++EV + P K LR+ + R W ISRQRVWGVP+P+FY D T I+ E I H
Sbjct: 424 ILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIFYAEDGTPIMTEETINH 483
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L E+G + W+ + LL + N TK DI+D+WFDSG S VL ++
Sbjct: 484 VSDLFREYGSNVWFDREAKDLLPAGFTSEHSPNGKFTKETDIMDVWFDSGSSHQGVLAER 543
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSV + AP+++V GF +D+ G KMSKS+GN
Sbjct: 544 DYLTYPADMYLEGSDQYRGWFNSSLITSVVVSGHAPYKSVLSQGFTLDQSGKKMSKSLGN 603
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + + G +++R WV + A V
Sbjct: 604 VIDPNKVVK-----------------------------QMGAEIIRLWVMS-ADTSADVR 633
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYVDVYMLKRLCEFQNTMD 938
+ L + +K+R++ R+LL + VD YM F M
Sbjct: 634 VSMETLQQIAESYRKLRNTFRFLLANTSDFGPENFVAYEKREAVDQYMTVNFNRFLAGMR 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ + + A + L+NFV N+LS+FY + KD LY + + R S T + I L
Sbjct: 694 DEFDRYDFLNAYKHLINFVNNDLSSFYMNVAKDVLYIEPEDSHVRRSMQATFYEILSGLT 753
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EEV+S++
Sbjct: 754 KLLTPILPHTTEEVWSYM 771
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 232/395 (58%), Gaps = 16/395 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPSFVLHDGPPYANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + R + +ALE + QK F+ GV +W+H Y T K
Sbjct: 99 LPIEHQLTKAGYDRKKMSLTEFRDLCQKYALEQVEIQKKGFKRLGVAGEWDH-PYLTLAK 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++ Q
Sbjct: 158 EFEAAQIKVFGAFAKRGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFTEQV-Q 215
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESL 245
LL+ +D + + WTTTPW++PA++ +A + EY++ G++ +VA L+ L
Sbjct: 216 DGKGLLD--SDTYLVGWTTTPWTIPASEAVAVSADFEYALVQPSGSDRKYVVAASLLGDL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F TD +VV F G ++ +T HP R+L + A +V+ GTGLVH AP +G
Sbjct: 274 AQKFNWTDYQVVKTFKGAEMEGMTTKHPYI--DRELLVGLADYVTDDAGTGLVHTAPGYG 331
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTEN 362
DD+ +P+ + +QG + + GP +G+ D D L L+E +L E+
Sbjct: 332 DDDYNFGKKYNLPIFAPMNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEED 390
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+HSYP+DWRTKKP++ +A+ QWF+ ++++ E L
Sbjct: 391 LEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDEIL 425
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVIL 1166
+ +QG + + GP +G+ + D L L+E +L E+ +HSYP+DWRTKKP++
Sbjct: 349 MNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ ++++ E L ++ V + P K LR+ + R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIDKMRDEILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L E+G + W+ + LL
Sbjct: 468 YAEDGTPIMTEETINHVSDLFREYGSNVWFDREAKDLL 505
>gi|418018044|ref|ZP_12657600.1| isoleucyl-tRNA synthetase [Streptococcus salivarius M18]
gi|345526893|gb|EGX30204.1| isoleucyl-tRNA synthetase [Streptococcus salivarius M18]
Length = 932
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 324/617 (52%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G + +VA L+ +L F TD++V+ + G+ L I HP + E
Sbjct: 247 ADIEYVLVKPAGEDRKFVVASELLNSLSEKFGWTDVEVLQSYRGEELNKIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + + + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDTTN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +T +++ R VD YM R + T+
Sbjct: 635 MDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVKTIRD 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ + L+NF+ ELSAFY KD +Y +S R ++I + +
Sbjct: 695 AYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+ PI+PH AEE++S+L
Sbjct: 755 LLTPILPHTAEEIWSYL 771
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 225/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G YVPG
Sbjct: 34 AKMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G + +VA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGEDRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD+EV+ + G+ L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVEVLQSYRGEELNKIVTEHPWDTEVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L +EHG WW + LL
Sbjct: 469 EDKTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|402757613|ref|ZP_10859869.1| isoleucyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 945
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 217/634 (34%), Positives = 339/634 (53%), Gaps = 64/634 (10%)
Query: 417 GTALAESELEYKPDHISKSI---YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPA 470
G++LAE+E+EY+ D S +I + + L ++ A L ++ ATD+ +IWTTTPW+LPA
Sbjct: 201 GSSLAEAEVEYE-DKKSDAIDVGFTVVDLKELSARLNVDVQDATDI--VIWTTTPWTLPA 257
Query: 471 NQFIAFNPALEYSVASV---KGA-NVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDIT 525
NQ +A + ++Y + V +G N I+AK LVE+ ++ + V+ DF G ++++
Sbjct: 258 NQAVALHADIDYQLVQVTTERGTQNFILAKDLVESAIERYKLANPVVLADFKGAAIENLL 317
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
HP+ + R + ++ V ++ GTG VH AP HG DD+ + L ++ V N + G Y
Sbjct: 318 LQHPLLAD-RQVPVILGEHVIATSGTGAVHTAPGHGVDDYKVGLLYQLKVENPVGGNGVY 376
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI 644
+ P G +I + L LW +HSYP+ WR K P+I +A+ QWFI
Sbjct: 377 LATS-PIFAGEHIYKANPQIIEALGAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFI 435
Query: 645 --DTERIKPEALACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
D ++ AL +E E+ FVP+ + ++ I RP WCISRQR WGVPIP F DT
Sbjct: 436 SMDANGLRQNALNAIENEIEFVPDWGQSRIQSMIEGRPDWCISRQRTWGVPIPFFVHKDT 495
Query: 702 IIVNEAN---IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGIS 758
++ I+ LI++ G D W++ + + N + D LD+WFDSG +
Sbjct: 496 NALHPRTPELIEEVAKLIEQEGIDGWYNREASEFIGADAEQYNAIR--DTLDVWFDSGTT 553
Query: 759 WSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
VL+++ PA +Y+EG DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG
Sbjct: 554 HYAVLRERDDLQEPADLYLEGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGR 613
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GN+I+ DI + G D LR+W+A+
Sbjct: 614 KMSKSLGNIITPQDIIKD-----------------------------MGADGLRFWIAS- 643
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKR 929
A + GK I + + D ++IR++LR+LL L+ ST ++ +D Y+L+R
Sbjct: 644 ADYRYEMTAGKEIFSRASDGYRRIRNTLRFLLANLNGFKPSTDALPVDQLIALDQYILQR 703
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
E Q T+ Y E + + L NF +N+L FY ++KDR Y + +AR S
Sbjct: 704 AAEVQKTIQQAYEEMNFHIVTNALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSAQTA 763
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L++I +R ++PI+ A+E + +P + G +
Sbjct: 764 LYHIVQAFVRWMSPILSFTAQEAWPLIPEQTGKY 797
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 227/408 (55%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y RE+ GK +++LHDGPPYANG H+GHAVNK+LKDI ++S +L G YVPGWD
Sbjct: 46 IYQQIRESRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVLDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W ++LAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRALGAIAKAGHIEPGLKPVNWCMDCGSSLAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV---KGA- 233
+ L ++ A L ++ ATD+ +IWTTTPW+LPANQ +A + ++Y + V +G
Sbjct: 224 TVVDLKELSARLNVDVQDATDI--VIWTTTPWTLPANQAVALHADIDYQLVQVTTERGTQ 281
Query: 234 NVIVAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + V+ DF G ++++ HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAIERYKLANPVVLADFKGAAIENLLLQHPLLAD-RQVPVILGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L ++ V N + G Y + P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLLYQLKVENPVGGNGVYLATS-PIFAGEHIYKANPQIIEAL 399
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW +HSYP+ WR K P+I +A+ QWFI D ++ AL
Sbjct: 400 GAVGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDANGLRQNAL 447
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
Query: 1145 LWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKS 1200
LW +HSYP+ WR K P+I +A+ QWFI D ++ AL +E + FVP+ +
Sbjct: 405 LWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDANGLRQNALNAIENEIEFVPDWGQSR 464
Query: 1201 LRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSL 1257
++ I RP WCISRQR WGVPIP F DT ++ I+ LI++ G D W++
Sbjct: 465 IQSMIEGRPDWCISRQRTWGVPIPFFVHKDTNALHPRTPELIEEVAKLIEQEGIDGWYNR 524
Query: 1258 PVEQLLNTSDVNSNVTK 1274
+ + N +
Sbjct: 525 EASEFIGADAEQYNAIR 541
>gi|392987359|ref|YP_006485952.1| isoleucyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
gi|392334779|gb|AFM69061.1| isoleucyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
Length = 930
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 221/638 (34%), Positives = 334/638 (52%), Gaps = 60/638 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGLLDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ +D+ V+ + GQ ++ +T HP +R+
Sbjct: 247 PTYTYVLIEADGRKFVVAKDLLEKVQTEIGWSDVQVLKEIAGQEMEYMTAWHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+PV++ + ++G Y+ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGNRYKLPVVSPVDSKGVYTEEA-PGFEGV 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 364 -FYDKANPMITDLLQEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDDFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 EEVEKVDWIIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ + LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AQLFAEHGSIIWFEKEAKDLLPEGFTHPGSPNGQFTKETDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVLSQGFTLDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP K + +G D+LR WVA+ + V +
Sbjct: 602 I-----------LPD------------------KVIKQFGADILRLWVAS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+L+ + +IS R VD YM RL E +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLIANTEDFDPQKDTISFEELRSVDKYMTIRLNEVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LSAFY KD +Y +S N R + L
Sbjct: 692 EEGYEKYNFMHIYRTVMNFLTVDLSAFYLDFAKDVVYIESENDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQY 1035
+ + PI+PH AEE++S L + F Y +Y
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EFVQLSELPGYQEY 788
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 240/400 (60%), Gaps = 18/400 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP FILHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NKIYQKRQELNEGKPSFILHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRAPYVPG 93
Query: 65 WDCHGLPIEL----KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WD HGLPIE K I K+ +S + +K + +AL ++ Q+ +F+ GV DWEH
Sbjct: 94 WDTHGLPIEQVLANKGIKRKEMTMS--EYLEKCREYALSQVDKQREDFKRLGVAGDWEH- 150
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI+
Sbjct: 151 PYVTLDPSYEAAQIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIF 209
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ + L E D +IWTTTPW+LPANQ IA NP Y + G +VAK
Sbjct: 210 VAFNVKDGKGLLDE---DTAFVIWTTTPWTLPANQGIAVNPTYTYVLIEADGRKFVVAKD 266
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+E ++ +D++V+ + GQ ++ +T HP +R+ ++ V+ GTGLVH
Sbjct: 267 LLEKVQTEIGWSDVQVLKEIAGQEMEYMTAWHPFY--ERESLVILGDHVTLDAGTGLVHT 324
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--V 357
AP HG+DD++ K+PV++ + ++G Y+ +A PG EG+ + L++ +
Sbjct: 325 APGHGEDDYIAGNRYKLPVVSPVDSKGVYTEEA-PGFEGV-FYDKANPMITDLLQEKGAL 382
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 383 LKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDDFRQNIL 422
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G Y+ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGVYTEEA-PGFEGV-FYDKANPMITDLLQEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDDFRQNILEEVEKVDWIIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ + LL
Sbjct: 465 YAENGEAIITPE-TIEHVAQLFAEHGSIIWFEKEAKDLL 502
>gi|340399070|ref|YP_004728095.1| isoleucyl-tRNA synthetase [Streptococcus salivarius CCHSS3]
gi|338743063|emb|CCB93571.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) (IleRS)
[Streptococcus salivarius CCHSS3]
Length = 932
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 210/617 (34%), Positives = 324/617 (52%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G + +VA L+ +L F TD++V+ + G+ L I HP + E
Sbjct: 247 ADIEYVLVKPAGEDRKFVVASELLNSLSEKFGWTDVEVLQSYRGEELNQIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E + L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGRVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANNGVAPYKQLLSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + + + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDTTN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +T +++ R VD YM R + T+
Sbjct: 635 MDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVKTIRD 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ + L+NF+ ELSAFY KD +Y +S R ++I + +
Sbjct: 695 AYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+ PI+PH AEE++S+L
Sbjct: 755 LLTPILPHTAEEIWSYL 771
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 225/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G YVPG
Sbjct: 34 AKMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G + +VA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGEDRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD+EV+ + G+ L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVEVLQSYRGEELNQIVTEHPWDTEVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E + L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGRVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L +EHG WW + LL
Sbjct: 469 EDKTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|373497895|ref|ZP_09588411.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 12_1B]
gi|371962417|gb|EHO80018.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 12_1B]
Length = 933
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 207/623 (33%), Positives = 324/623 (52%), Gaps = 56/623 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EYK + S SIY+K+K N L + +IWTTTPW+LPAN I N
Sbjct: 193 TALAEAEIEYK-NVSSPSIYVKMKANADLLERLGLTEEAWVVIWTTTPWTLPANVAITLN 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P EY V + N+I+ K L E + +++ +F G+ L+ TY HP R
Sbjct: 252 PEFEYGVYKTEKGNLILGKDLAEKAFTEMDLEQFELIKEFQGKDLERTTYQHPFL--DRT 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ + +PV++ I N+G + +AG GL
Sbjct: 310 GLIILGTHVTADAGTGCVHTAPGHGQDDYVVGVRYGLPVISPINNKGVLTEEAGE-FAGL 368
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K HL + ++ + +HSYP+DWR++ PVI +A++QWF++ E I+ A
Sbjct: 369 FYAQANKAICAHLEKSGHLMKLKMIEHSYPHDWRSRTPVIFRATEQWFVNVEGSDIRERA 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L L++V F+P + + + RP WCISRQRVWGVPIPVF++ T I N+ +
Sbjct: 429 LKALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFFNEATGKEIFNKEILAR 488
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVLKD 765
++ + G W S E+L+ + + K +I+D+WFDSG+S VL+
Sbjct: 489 IVGIVKKEGTAAWLKYSAEELIGEELMEKYDLKGLELRKETNIMDVWFDSGVSHRAVLET 548
Query: 766 K------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF +SLLTS+ H APF+ + HGFV D +G KMSKSV
Sbjct: 549 RGDLLHRPADMYLEGSDQHRGWFQTSLLTSIGSTHDAPFKKILTHGFVNDGEGKKMSKSV 608
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN + D+ + YG D+LR W A+ ++
Sbjct: 609 GNTVVPSDV-----------------------------IKLYGADILRLWCASVDYRE-D 638
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V I NIL + +++R++ RY+LG ++ +T + +D + L +L +
Sbjct: 639 VKISDNILKQMAEAYRRVRNTARYILGNSNDFDPNTDKVPYEQLMEIDKWALNKLEILKR 698
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +++ + + F ++SAFY ++KDRLY + N R + + I
Sbjct: 699 KVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDIIKDRLYTEGTNSIERRAAQTVMTEILV 758
Query: 996 VLLRTVAPIMPHLAEEVYSHLPS 1018
L + + PI+ +EE++ LP
Sbjct: 759 TLTKMITPILSFTSEEIWETLPE 781
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 240/419 (57%), Gaps = 15/419 (3%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G FILHDGPPYANG HIGHA+NKILKDI L+ L+G +V YVPGWD HGLPIELK
Sbjct: 47 GTQTFILHDGPPYANGEIHIGHALNKILKDIILKYKRLRGYKVPYVPGWDTHGLPIELKV 106
Query: 77 ---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+ SK K +S ++IR+ +A + + Q+ F G+L DWE N Y T EY Q
Sbjct: 107 TEKLGSKAKEMSAVEIRELCAEYAKKWVGIQREGFVRLGILGDWE-NPYLTLKPEYEAKQ 165
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
L F LY+ YI++ LKP+YWSP + TALAE+E+EYK + S SIY+K+K N L
Sbjct: 166 LEVFGELYENGYIFKGLKPIYWSPVTETALAEAEIEYK-NVSSPSIYVKMKANADLLERL 224
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD- 252
+ +IWTTTPW+LPAN I NP EY V + N+I+ K L E +
Sbjct: 225 GLTEEAWVVIWTTTPWTLPANVAITLNPEFEYGVYKTEKGNLILGKDLAEKAFTEMDLEQ 284
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
E++ +F G+ L+ TY HP R ++ V++ GTG VH AP HGQDD+++ +
Sbjct: 285 FELIKEFQGKDLERTTYQHPFL--DRTGLIILGTHVTADAGTGCVHTAPGHGQDDYVVGV 342
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDW 371
+PV++ I N+G + +AG GL K HL + ++ + +HSYP+DW
Sbjct: 343 RYGLPVISPINNKGVLTEEAGE-FAGLFYAQANKAICAHLEKSGHLMKLKMIEHSYPHDW 401
Query: 372 RTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRPGTALAESELEYKPD 430
R++ PVI +A++QWF++ E K + ++ +R G S LE +PD
Sbjct: 402 RSRTPVIFRATEQWFVNVEGSDIRERALKALDDVEFIPAWGRNRIG-----SMLETRPD 455
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I N+G + +AG GL K HL + ++ + +HSYP+DWR++ PVI +
Sbjct: 352 INNKGVLTEEAGE-FAGLFYAQANKAICAHLEKSGHLMKLKMIEHSYPHDWRSRTPVIFR 410
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF++ E I+ AL L+ V F+P + + + RP WCISRQRVWGVPIPV
Sbjct: 411 ATEQWFVNVEGSDIRERALKALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPV 470
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F++ T I N+ + ++ + G W E+L+
Sbjct: 471 FFNEATGKEIFNKEILARIVGIVKKEGTAAWLKYSAEELI 510
>gi|184155058|ref|YP_001843398.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
gi|254782414|sp|B2GB86.1|SYI_LACF3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|183226402|dbj|BAG26918.1| isoleucyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
Length = 930
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 324/618 (52%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ + ++ Q LL+ +D + + WTTTPW++PA++ +A +
Sbjct: 191 SALAEAEVEYH-DVVAKTAFFTEQV-QDGKGLLD--SDTYLVGWTTTPWTIPASEAVAVS 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
EY++ G++ +VA L+ +L F TD VV F G ++ +T HP
Sbjct: 247 ADFEYALVQPSGSDRKYVVAASLLGDLAQKFNWTDYQVVKTFKGAEMEGMTTKHPYI--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R+L + A +V+ GTGLVH AP +G DD+ +P+ + +QG + + GP +
Sbjct: 305 RELLVGLADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIFAPMNDQGVLTAENGPEFD 364
Query: 595 GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D D L L+E +L E+ +HSYP+DWRTKKP++ +A+ QWF+ ++++ E
Sbjct: 365 GV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDE 423
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L ++EV + P K LR+ + R W ISRQRVWGVP+P+FY D T I+ E I H
Sbjct: 424 ILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIFYAEDGTPIMTEETINH 483
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L E+G + W+ + LL + N TK DI+D+WFDSG S VL ++
Sbjct: 484 VSDLFREYGSNVWFDREAKDLLPAGFTSEHSPNGKFTKETDIMDVWFDSGSSHQGVLAER 543
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSV + AP+++V GF +D+ G KMSKS+GN
Sbjct: 544 DYLTYPADMYLEGSDQYRGWFNSSLITSVVVSGHAPYKSVLSQGFTLDQSGKKMSKSLGN 603
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + + G +++R WV + A V
Sbjct: 604 VIDPNKVVK-----------------------------QMGAEIIRLWVMS-ADTSADVR 633
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYVDVYMLKRLCEFQNTMD 938
+ L + +K+R++ R+LL + VD YM F M
Sbjct: 634 VSMETLQQISESYRKLRNTFRFLLANTSDFGPENFVAYEKREAVDQYMTVNFNHFLAGMR 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
+ + + A + L+NFV N+LS+FY + KD LY + + R S T + I L
Sbjct: 694 DEFDRYDFLNAYKHLINFVNNDLSSFYMNVAKDVLYIEPEDSHVRRSMQATFYEILSGLT 753
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EEV+S++
Sbjct: 754 KLLTPILPHTTEEVWSYM 771
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 232/395 (58%), Gaps = 16/395 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPSFVLHDGPPYANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + R + +ALE + QK F+ GV +W+H Y T K
Sbjct: 99 LPIEHQLTKAGYDRKKMSLTEFRDLCQKYALEQVEIQKKGFKRLGVAGEWDH-PYLTLAK 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ + ++ Q
Sbjct: 158 EFEAAQIKVFGAFAKRGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAFFTEQV-Q 215
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESL 245
LL+ +D + + WTTTPW++PA++ +A + EY++ G++ +VA L+ L
Sbjct: 216 DGKGLLD--SDTYLVGWTTTPWTIPASEAVAVSADFEYALVQPSGSDRKYVVAASLLGDL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F TD +VV F G ++ +T HP R+L + A +V+ GTGLVH AP +G
Sbjct: 274 AQKFNWTDYQVVKTFKGAEMEGMTTKHPYI--DRELLVGLADYVTDDAGTGLVHTAPGYG 331
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTEN 362
DD+ +P+ + +QG + + GP +G+ D D L L+E +L E+
Sbjct: 332 DDDYNFGKKYNLPIFAPMNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEED 390
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+HSYP+DWRTKKP++ +A+ QWF+ ++++ E L
Sbjct: 391 LEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDEIL 425
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ +QG + + GP +G+ + D L L+E +L E+ +HSYP+DWRTKKP++
Sbjct: 349 MNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPIVF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ ++++ E L ++ V + P K LR+ + R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIDKMRDEILKAVDEVTYYPTWGKVRLRNMLKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L E+G + W+ + LL
Sbjct: 468 YAEDGTPIMTEETINHVSDLFREYGSNVWFDREAKDLL 505
>gi|418324566|ref|ZP_12935800.1| isoleucine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
gi|365225253|gb|EHM66498.1| isoleucine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
Length = 917
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 219/629 (34%), Positives = 333/629 (52%), Gaps = 69/629 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + E D +IWTTTPW+LPAN I +
Sbjct: 191 SSLAEAEIEYH-DKRSPSIYVAFDVKDGKNVVDE---DAQFIIWTTTPWTLPANVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L Y V G +V K LV ENL W DI++V +F G+ L+ + HP E
Sbjct: 247 PELTYGEYLVDGHKYVVGKDLVDDVAENLGWN-TDDIELVKEFSGKDLEYVEAQHPF-LE 304
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R + L+ V++ GTG VH AP HG+DD+++ +PV++ + +G + +AGP
Sbjct: 305 DRTVLLINGDHVTTDAGTGCVHTAPGHGEDDYIVGTKYDLPVISPVDYKGVLTEEAGP-- 362
Query: 594 EGLNILGDGKDQ----VLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G+ D+ + L++ + +L + HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 363 ----FAGEFYDKANKPITDLLKENGSLLKLDFITHSYPHDWRTKKPVIFRATPQWFASID 418
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVN 705
+++ + L +EE +F + K + + I R W ISRQRVWGVP+PVFY +GD I++
Sbjct: 419 KVRQDILDAIEETHFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGD-IVMT 477
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWS 760
E + H L++E+G + W+ + LL + N TK DI+D+WFDSG S
Sbjct: 478 EETVNHVADLVEEYGSNVWFDREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHR 537
Query: 761 HVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
VL+ +P A +Y+EG DQ GWF SS+ TSVA ++ +P++ + HGF +D +G KM
Sbjct: 538 GVLEQRPELSFPADLYLEGSDQYRGWFNSSITTSVATRNRSPYKMLLSHGFFMDGEGKKM 597
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNVI I + G D+ R WV++
Sbjct: 598 SKSLGNVIVPEQIVKQK-----------------------------GADIARLWVSS-VD 627
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLC 931
I I+ + D +KIR++LR++LG +++ + T +I+ VD Y+L R
Sbjct: 628 YLADARISDEIIKQTADVYRKIRNTLRFMLGNVNDFNPETDAIAEADLLEVDRYILNRFR 687
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
EF + Y F Y + + NF+ ELS FY KD LY + + R S L+
Sbjct: 688 EFTASTIKNYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSAHKRRSMQTVLY 747
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLPSRQ 1020
I + + +API+ H A+EV+S++P Q
Sbjct: 748 QIVVDMTKLLAPILAHTADEVWSYIPHVQ 776
Score = 279 bits (713), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 233/405 (57%), Gaps = 27/405 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E+Y E G +ILHDGPPYANG H+GHA+NKILKDI R +QG YVPGW
Sbjct: 35 EIYQKSLEKNKGNTSYILHDGPPYANGGLHMGHALNKILKDIITRYKTMQGYYTPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL I QK +F+ GV D++ N Y
Sbjct: 95 DTHGLPIE-QALTKKGVKRKEMSVSEFREKCKEFALNQIELQKKDFKRLGVSGDFD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY QL F + + IY+ LKPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLKPEYEAAQLRLFGEMAAKGLIYKGLKPVYWSPSSESSLAEAEIEYH-DKRSPSIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ + E D +IWTTTPW+LPAN I +P L Y V G +V K LV
Sbjct: 212 FDVKDGKNVVDE---DAQFIIWTTTPWTLPANVAITVHPELTYGEYLVDGHKYVVGKDLV 268
Query: 243 ----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W DIE+V +F G+ L+ + HP E R + L+ V++ GTG VH
Sbjct: 269 DDVAENLGWN-TDDIELVKEFSGKDLEYVEAQHPF-LEDRTVLLINGDHVTTDAGTGCVH 326
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQ----VLHLVE 354
AP HG+DD+++ +PV++ + +G + +AGP G+ D+ + L++
Sbjct: 327 TAPGHGEDDYIVGTKYDLPVISPVDYKGVLTEEAGP------FAGEFYDKANKPITDLLK 380
Query: 355 PD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +L + HSYP+DWRTKKPVI +A+ QWF ++++ + L
Sbjct: 381 ENGSLLKLDFITHSYPHDWRTKKPVIFRATPQWFASIDKVRQDIL 425
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKPVI +A+ QWF ++++ + L +E +F + K + + I R W
Sbjct: 393 HSYPHDWRTKKPVIFRATPQWFASIDKVRQDILDAIEETHFKVDWGKTRIYNMIRDRGEW 452
Query: 1212 CISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
ISRQRVWGVP+PVFY +GD I++ E + H L++E+G + W+ + LL
Sbjct: 453 VISRQRVWGVPLPVFYAENGD-IVMTEETVNHVADLVEEYGSNVWFDREAKDLL 505
>gi|421452187|ref|ZP_15901548.1| Isoleucyl-tRNA synthetase [Streptococcus salivarius K12]
gi|400182618|gb|EJO16880.1| Isoleucyl-tRNA synthetase [Streptococcus salivarius K12]
Length = 932
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 324/617 (52%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G + +VA L+ +L F TD++V+ + G+ L I HP + E
Sbjct: 247 ADIEYVLVKPAGEDRKFVVASELLNSLSEKFGWTDVEVLQSYRGEELNKIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANNGVAPYKQLLSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + + + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDTTN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +T +++ R VD YM R + T+
Sbjct: 635 MDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVKTIRD 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ + L+NF+ ELSAFY KD +Y +S R ++I + +
Sbjct: 695 AYANFEFLIIYKALVNFINVELSAFYLDFAKDVVYIESAESLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+ PI+PH AEE++S+L
Sbjct: 755 LLTPILPHTAEEIWSYL 771
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 225/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G YVPG
Sbjct: 34 AKMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G + +VA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGEDRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD+EV+ + G+ L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVEVLQSYRGEELNKIVTEHPWDTEVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGIANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L +EHG WW + LL
Sbjct: 469 EDKTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|226952305|ref|ZP_03822769.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226836971|gb|EEH69354.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 945
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 224/673 (33%), Positives = 350/673 (52%), Gaps = 78/673 (11%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + +++G I + G H PG +ALAE+E+EY+ D S +I
Sbjct: 165 TMNFKQEADIVRSLGAI-AKAG--HIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-- 489
+ + L + A L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + ++
Sbjct: 221 VGFTVVDLKDLSARLNVDVQDVTDI--VIWTTTPWTLPANQAVAVHADIDYQLVQIQNDR 278
Query: 490 --ANVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 546
N I+AK LVE+ ++ + VV DF G ++++ HP+ + R + ++ V
Sbjct: 279 GTQNFILAKDLVESAIERYKLENPVVLADFKGAVIENLLLQHPLITD-RQVPVIVGEHVI 337
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 606
++ GTG VH AP HG DD+ + L + V N + G Y P A P G +I +
Sbjct: 338 ATSGTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGVYLPTA-PIFAGEHIYKANPKII 396
Query: 607 LHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNF 662
L LW +HSYP+ WR K P+I +A+ QWFI D + ++ AL +E ++ F
Sbjct: 397 EALGATGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQTALNAIENDIEF 456
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN---IKHFCTLIDEH 719
VP+ K ++ I RP WCISRQR WGVPIP F DT ++ I+ LI++
Sbjct: 457 VPDWGKNRIQSMIEGRPDWCISRQRTWGVPIPFFVHKDTNALHPRTPELIEEVAQLIEQE 516
Query: 720 GPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEG 774
G D W++ + N + D LD+WFDSG + VL+++ PA +Y+EG
Sbjct: 517 GIDAWYNRDASDFIGADAEQYNAVR--DTLDVWFDSGTTHYAVLREREELQDPADLYLEG 574
Query: 775 MDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKK 834
DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KMSKS+GN+I+ DI +
Sbjct: 575 SDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKMSKSLGNIITPQDIIKD--- 631
Query: 835 LPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDV 894
G D LR+W+A+ A + GK I + + D
Sbjct: 632 --------------------------MGADGLRFWIAS-ADYRYEMTAGKEIFSRASDGY 664
Query: 895 QKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARAS 950
++IR++LR+LL L+ S+ ++ +D Y+L+R E Q T+ Y E + +
Sbjct: 665 RRIRNTLRFLLANLNGFKPSSDALPVDELIALDQYILQRAAEVQKTIQQAYEEMNFHIVT 724
Query: 951 RVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAE 1010
L NF +N+L +FY ++KDR Y + +AR S L+++ +R ++PI+ A+
Sbjct: 725 NALTNFCINDLGSFYLDIIKDRQYTTKADSQARRSAQTALYHLVQAFVRWMSPILSFTAQ 784
Query: 1011 EVYSHLPSRQGTF 1023
E + +P + +
Sbjct: 785 EAWPLIPEQTDKY 797
Score = 241 bits (614), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 225/408 (55%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R + GK +++LHDGPPYANG H+GHAVNK+LKDI ++S +L G YVPGWD
Sbjct: 46 IYQQIRTSRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVLDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A + QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAYTQVELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSLGAIAKAGHIEPGLKPVNWCLDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG----A 233
+ L + A L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + ++
Sbjct: 224 TVVDLKDLSARLNVDVQDVTDI--VIWTTTPWTLPANQAVAVHADIDYQLVQIQNDRGTQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + VV DF G ++++ HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAIERYKLENPVVLADFKGAVIENLLLQHPLITD-RQVPVIVGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P A P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLQYNLKVDNPVGGNGVYLPTA-PIFAGEHIYKANPKIIEAL 399
Query: 353 VEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW + +HSYP+ WR K P+I +A+ QWFI D + ++ AL
Sbjct: 400 GATGRLWAHQPIKHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQTAL 447
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW +HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTA-PIFAGEHIYKANPKIIEALGATGRLWAHQPIKHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E + FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAKGLRQTALNAIENDIEFVPDWGKNRIQSMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT ++ I+ LI++ G D W++ + N +
Sbjct: 487 IPFFVHKDTNALHPRTPELIEEVAQLIEQEGIDAWYNRDASDFIGADAEQYNAVR 541
>gi|395239330|ref|ZP_10417210.1| Isoleucyl-tRNA synthetase [Lactobacillus gigeriorum CRBIP 24.85]
gi|394476425|emb|CCI87187.1| Isoleucyl-tRNA synthetase [Lactobacillus gigeriorum CRBIP 24.85]
Length = 930
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/626 (33%), Positives = 327/626 (52%), Gaps = 61/626 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S +IY+ + L + + +IWTTTPW++PAN I+ N
Sbjct: 191 STLAEAEVEYH-DVKSPNIYVAFPVKDGKGIL--DTENTYFIIWTTTPWTIPANLGISVN 247
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V +V + + E L W + +VV G + + HP+ +
Sbjct: 248 PQFDYSVVQVGDKKYVVGTSRLEAVAETLGWE---NYEVVQHLKGSEMDRMVAKHPLYDQ 304
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPG 592
D ++ V++ GTGLVH AP G+DDF + +PV + I N+G ++ + P
Sbjct: 305 --DSLVMTGMHVTADDGTGLVHTAPGFGEDDFNVGQRYGLPVFSPIDNKGCFTDEVPDPD 362
Query: 593 LEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
L G+ D V+ +E +L + HSYP+DWRTKKPVI +A+ QWF + +
Sbjct: 363 LVGM-FYDDANKVVVEKLEAVGALLKLSFFTHSYPHDWRTKKPVIFRATTQWFASISKFR 421
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
E L + + +F+P + L + I R W ISRQR WGVP+P+FY D T IV I
Sbjct: 422 NEILDEINKASFMPSWGQTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETI 481
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H ++++ G + W++ + E+LL + N TK DILD+WFDSG SW+ V+K
Sbjct: 482 EHLAKIVEKEGTNAWYTHTAEELLPEGFTSEHSPNGKFTKEQDILDVWFDSGSSWAGVMK 541
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSVA + AP++ V GFV+D+KG KMSKS+
Sbjct: 542 NRDNLNYPADLYLEGSDQYRGWFNSSLITSVATQGKAPYKQVLSQGFVLDDKGHKMSKSL 601
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVIS +D+ KK+ G +++R WV A A
Sbjct: 602 GNVISPNDVI---KKM--------------------------GAEIIRLWV-AQADTTSD 631
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + +ILN + + +KIR++ RY+L + T + R VD Y+ +L +
Sbjct: 632 VAVSYDILNQAAESYRKIRNTFRYMLANTSDFDPETDRVVYDDLRSVDQYLEVKLNDLVK 691
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F + + + F+ N+LSAFY KD LY ++ N + R S +++
Sbjct: 692 SCLDAYDRFDFTTVFKQVFKFISNDLSAFYLDFAKDVLYIEAQNSKERRSMQTVIYDAAV 751
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQG 1021
L + + PI+PH EE++ L ++
Sbjct: 752 KLAKVLTPILPHTMEEIWGFLHEKEA 777
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 219/394 (55%), Gaps = 14/394 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F LHDGPP+ANG H+GH++NKI KDI +R ++G +VPGWD HG
Sbjct: 39 QRLKLNQGNPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRYKNMRGFYAPFVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K + R+ + FA+E I Q+ +F+ G+LADW+H Y T
Sbjct: 99 LPIEQQLAKQGVDRKTMDRAKYRELCRQFAMEQIEKQRTDFKRLGILADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ ++ F ++++ YIY+ KPVYWS SS + LAE+E+EY D S +IY+ +
Sbjct: 158 EFEAEEIRVFGKMFEKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DVKSPNIYVAFPVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
L + + +IWTTTPW++PAN I+ NP +YSV V +V +E++
Sbjct: 217 GKGIL--DTENTYFIIWTTTPWTIPANLGISVNPQFDYSVVQVGDKKYVVGTSRLEAVAE 274
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
T + EVV G + + HP+ + D ++ V++ GTGLVH AP G+D
Sbjct: 275 TLGWENYEVVQHLKGSEMDRMVAKHPLYDQ--DSLVMTGMHVTADDGTGLVHTAPGFGED 332
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--DVLWTENY 363
DF + +PV + I N+G ++ + P L G+ D V+ +E +L +
Sbjct: 333 DFNVGQRYGLPVFSPIDNKGCFTDEVPDPDLVGM-FYDDANKVVVEKLEAVGALLKLSFF 391
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + E L
Sbjct: 392 THSYPHDWRTKKPVIFRATTQWFASISKFRNEIL 425
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF + + E L + +F+P + L + I R
Sbjct: 391 FTHSYPHDWRTKKPVIFRATTQWFASISKFRNEILDEINKASFMPSWGQTRLYNMIKDRG 450
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H ++++ G + W++ E+LL
Sbjct: 451 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHLAKIVEKEGTNAWYTHTAEELL 505
>gi|77411442|ref|ZP_00787788.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
gi|77162528|gb|EAO73493.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
Length = 930
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 333/643 (51%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGIL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +EY V + G+ ++A+ LV++L F + ++V G+ L I HP + E
Sbjct: 247 PDMEYVVVAPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHTGKELNHIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + ++G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V LV+ + L +E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 366 G-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+ NF PE KK L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L E+G WW + LL + N K DI+D+WFDSG SW+ V+
Sbjct: 481 -DHVADLFAEYGSIVWWQRDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVM 539
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARENLSYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+ + +G ++LR WV + S +
Sbjct: 600 LGNTILPSDVEK-----------------------------QFGAEILRLWVTSVDSSN- 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V I +IL + + +KIR++LR+L+ + + +++ VD YM + +
Sbjct: 630 DVRISMDILKQTSETYRKIRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTIKFNQVV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+T++ Y + + + ++NFV +LSAFY KD +Y ++ N R ++I
Sbjct: 690 DTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
L + + PI+PH AEE++S+L + F V +SG
Sbjct: 750 VKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSG 792
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 231/397 (58%), Gaps = 21/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ALN GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQALNEGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K + + + +++AL ++ Q+ +F+ GV ADWE N Y T
Sbjct: 99 LPIEQVLAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y K+
Sbjct: 158 DYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYANKVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--NVIVAKCLVESL 245
L TD + ++WTTTP+++ A++ + P +EY V + G+ ++A+ LV+SL
Sbjct: 217 GKGIL---DTDTYIVVWTTTPFTVTASRGLTVGPDMEYVVVAPVGSERKYLLAEVLVDSL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F + E+V G+ L I HP + E +L +L V++ GTG+VH AP G
Sbjct: 274 AAKFGWENFEIVTHHTGKELNHIVTEHPWDTEVEELVIL-GDHVTTDSGTGIVHTAPGFG 332
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD----VLWT 360
+DD+ + +A + V+ + ++G +AGP E G D+V LV+ +L +
Sbjct: 333 EDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE-----GQFYDKVTPLVKEKLGDLLLAS 387
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 388 EVINHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ ++G +AGP EG + D+V LV+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDSRGLMMENAGPDFEG-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E NF PE KK L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L E+G WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVADLFAEYGSIVWWQRDAKDLL 504
>gi|225850238|ref|YP_002730472.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
gi|259511511|sp|C0QP76.1|SYI_PERMH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|225645021|gb|ACO03207.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
Length = 947
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 218/627 (34%), Positives = 322/627 (51%), Gaps = 64/627 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TA AE+E+EYK + SIY+ +L + P + E ++A+IWTTTPW+LPAN I N
Sbjct: 195 TAEAEAEVEYK-EKKDPSIYVAFELVESPFDIKE---KVYAVIWTTTPWTLPANLGIMVN 250
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P +Y + IVAK L+E+ + +V+ + G+ L+ + Y HP R
Sbjct: 251 PDFDYLFLRSEDKVYIVAKDLLESFSEKTGIEGEVIKEVKGRELEFLEYRHPFI--DRVS 308
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
K+ + FV GTGLVH AP HGQ+D+++ + + ++G+++ +A ++GL
Sbjct: 309 KIYLSEFVELGTGTGLVHMAPGHGQEDYIIGQRYGVEAFAPVDDEGRFTDEAPEFIQGLR 368
Query: 598 ILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDT-------ERI 649
+ + V L E VL E +HSYP+ WR K PVI +A+ QWFI E +
Sbjct: 369 VFEANERIVEKLRENGVLLHHETVKHSYPHCWRCKNPVIFRATPQWFISMDGITEKGETL 428
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEA 707
+ EAL +E V ++P + ++ I RP WCISRQR WGVPI VFY II +E
Sbjct: 429 RGEALKEIERVKWIPHWGENRIKSMIENRPDWCISRQRSWGVPIAVFYCKRCGNIIDDEK 488
Query: 708 NIKHFCTLI--DEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWS 760
+H L+ DE G D W+ E+LL K DILD+WFDSG+S +
Sbjct: 489 VFEHIADLVEKDEFGADIWFEREAEELLPEGYRCPKCDGEEFKKEEDILDVWFDSGVSHA 548
Query: 761 HVLKDK-------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
VLK PA +Y+EG DQ GWF SSLL VA AP+ V HGF++DEKG
Sbjct: 549 SVLKSGFWDELKWPADMYLEGSDQHRGWFQSSLLEGVASYGRAPYDAVLTHGFILDEKGN 608
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GNVI I + YG D+LR WV +
Sbjct: 609 KMSKSLGNVIPPEKIIK-----------------------------MYGADILRLWVVSE 639
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKR 929
+ + IG N+L S DD +KIR++ RY LG L++ + + +D +ML +
Sbjct: 640 DYTE-DIKIGMNLLKSIADDYRKIRNTFRYFLGNLYDFDANKDRVPYENLLEIDRWMLSK 698
Query: 930 LCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHT 989
L + + Y +++ + + FV+ +LSA Y ++KDRLY + + R S
Sbjct: 699 LQRLIDRSHSAYSNYRFHKIYHEIKRFVIVDLSAVYLDILKDRLYVYAPDSLERRSAQTV 758
Query: 990 LHNIFHVLLRTVAPIMPHLAEEVYSHL 1016
L+ + L + +API+ EE++ ++
Sbjct: 759 LYELLDSLTKLLAPILSFTTEEIWGYV 785
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 241/434 (55%), Gaps = 18/434 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY RE GK ++ILHDGPPYANG H+GHA+NKILKDI ++ ++GK +VPGW
Sbjct: 35 DLYKRLREERKGKEKYILHDGPPYANGNIHLGHALNKILKDILVKYESMKGKDAPFVPGW 94
Query: 66 DCHGLPIELKA------ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIE + + + LS + RK + +AL+ +N Q+ EF+ G++ +WE
Sbjct: 95 DCHGLPIEQQVEKLLKKEKKRKEDLSKSEFRKLCREYALKYVNIQREEFKRLGIIGNWE- 153
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
Y T Y ++ + ++++ YR KPVYW +TA AE+E+EYK + SI
Sbjct: 154 KPYLTMRPSYQAQEIRELGKIFRKGIAYRGKKPVYWCIYDKTAEAEAEVEYK-EKKDPSI 212
Query: 180 YLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
Y+ +L + P + E ++A+IWTTTPW+LPAN I NP +Y + IVAK
Sbjct: 213 YVAFELVESPFDIKE---KVYAVIWTTTPWTLPANLGIMVNPDFDYLFLRSEDKVYIVAK 269
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ES + EV+ + G+ L+ + Y HP R K+ + FV GTGLVH
Sbjct: 270 DLLESFSEKTGIEGEVIKEVKGRELEFLEYRHPFI--DRVSKIYLSEFVELGTGTGLVHM 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HGQ+D+++ + + ++G+++ +A ++GL + + V L E VL
Sbjct: 328 APGHGQEDYIIGQRYGVEAFAPVDDEGRFTDEAPEFIQGLRVFEANERIVEKLRENGVLL 387
Query: 360 -TENYQHSYPYDWRTKKPVILKASQQWFIDTERI--KPEALVCKTVGNILGRVGITHDRP 416
E +HSYP+ WR K PVI +A+ QWFI + I K E L + + I I H
Sbjct: 388 HHETVKHSYPHCWRCKNPVIFRATPQWFISMDGITEKGETLRGEALKEIERVKWIPH--W 445
Query: 417 GTALAESELEYKPD 430
G +S +E +PD
Sbjct: 446 GENRIKSMIENRPD 459
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 91/167 (54%), Gaps = 12/167 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ ++G+++ +A ++GL + + V L E VL E +HSYP+ WR K PVI +
Sbjct: 350 VDDEGRFTDEAPEFIQGLRVFEANERIVEKLRENGVLLHHETVKHSYPHCWRCKNPVIFR 409
Query: 1168 ASQQWFIDT-------ERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWG 1220
A+ QWFI E ++ EAL +E V ++P + ++ I RP WCISRQR WG
Sbjct: 410 ATPQWFISMDGITEKGETLRGEALKEIERVKWIPHWGENRIKSMIENRPDWCISRQRSWG 469
Query: 1221 VPIPVFY--DGDTIIVNEANIKHFCTLI--DEHGPDFWWSLPVEQLL 1263
VPI VFY II +E +H L+ DE G D W+ E+LL
Sbjct: 470 VPIAVFYCKRCGNIIDDEKVFEHIADLVEKDEFGADIWFEREAEELL 516
>gi|77408400|ref|ZP_00785140.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|77414696|ref|ZP_00790829.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 515]
gi|417004701|ref|ZP_11943340.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae FSL S3-026]
gi|421147591|ref|ZP_15607276.1| isoleucyl-tRNA ligase [Streptococcus agalactiae GB00112]
gi|77159256|gb|EAO70434.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 515]
gi|77173003|gb|EAO76132.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|341577683|gb|EGS28090.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae FSL S3-026]
gi|401685711|gb|EJS81706.1| isoleucyl-tRNA ligase [Streptococcus agalactiae GB00112]
Length = 930
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 333/643 (51%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGIL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +EY V + G+ ++A+ LV++L F + ++V G+ L I HP + E
Sbjct: 247 PDMEYVVVAPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHTGKELNHIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + ++G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V LV+ + L +E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 366 G-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+ NF PE KK L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L E+G WW + LL + N K DI+D+WFDSG SW+ V+
Sbjct: 481 -DHVADLFAEYGSIVWWQRDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVM 539
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARENLSYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+ + +G ++LR WV + S +
Sbjct: 600 LGNTILPSDVEK-----------------------------QFGAEILRLWVTSVDSSN- 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V I +IL + + +KIR++LR+L+ + + +++ VD YM + +
Sbjct: 630 DVRISMDILKQTSETYRKIRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTIKFNQVV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+T++ Y + + + ++NFV +LSAFY KD +Y ++ N R ++I
Sbjct: 690 DTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
L + + PI+PH AEE++S+L + F V +SG
Sbjct: 750 VKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSG 792
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 231/397 (58%), Gaps = 21/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ALN GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQALNEGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K + + + +++AL ++ Q+ +F+ GV ADWE N Y T
Sbjct: 99 LPIEQVLAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y K+
Sbjct: 158 DYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYANKVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--NVIVAKCLVESL 245
L TD + ++WTTTP+++ A++ + P +EY V + G+ ++A+ LV+SL
Sbjct: 217 GKGIL---DTDTYIVVWTTTPFTVTASRGLTVGPDMEYVVVAPVGSERKYLLAEVLVDSL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F + E+V G+ L I HP + E +L +L V++ GTG+VH AP G
Sbjct: 274 AAKFGWENFEIVTHHTGKELNHIVTEHPWDTEVEELVIL-GDHVTTDSGTGIVHTAPGFG 332
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD----VLWT 360
+DD+ + +A + V+ + ++G +AGP E G D+V LV+ +L +
Sbjct: 333 EDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE-----GQFYDKVTPLVKEKLGDLLLAS 387
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 388 EVINHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ ++G +AGP EG + D+V LV+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDSRGLMMENAGPDFEG-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E NF PE KK L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L E+G WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVADLFAEYGSIVWWQRDAKDLL 504
>gi|149195254|ref|ZP_01872343.1| isoleucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
gi|149134596|gb|EDM23083.1| isoleucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
Length = 911
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 216/634 (34%), Positives = 344/634 (54%), Gaps = 74/634 (11%)
Query: 413 HDRPGTALAESELEY--KPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPA 470
HD+ TALAE+E+EY K D+ SIY+ L++ L + +IWTTTPW+LPA
Sbjct: 190 HDK--TALAEAEVEYENKEDY---SIYVAFPLSEDANKKL-NINNAKIIIWTTTPWTLPA 243
Query: 471 NQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
N IA NP Y + S N IVAK E LK D++ +F +++ I+P+
Sbjct: 244 NMGIALNPEEAYVLTS---DNYIVAKKRYEALKEEGVIKGDILKEFSAAEFENLKAINPL 300
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALA-EKIPVLNLITNQGKYSPDA 589
N R+ ++ V+ G+G VH AP HG++D+ + L ++ + ++GKYS
Sbjct: 301 N--NRESLIILGEHVTMDGGSGCVHTAPGHGEEDYRVWLKYGNSEIIQPVDDEGKYSE-- 356
Query: 590 GPGLEGLNILGD---------GKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQ 640
++ N+L D +++L L+ +++ + HSYP+ WR PVI +A++
Sbjct: 357 --IIKKENLLPDEFVGEHIFKANEKILELLGDNLVSVSKFTHSYPHCWRCHNPVIFRATK 414
Query: 641 QWFIDTER------IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIP 694
Q+FI ++ ++ AL +E+V F PES K L+ ++ RP WCISRQR WGVPI
Sbjct: 415 QFFIAMDKEVEGDTLRNRALNEIEKVEFTPESGKNRLKSMVSNRPDWCISRQRDWGVPIA 474
Query: 695 VFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSD--VNSNVTKSNDILD 750
F D T +I+++ I++ + + G D W+ S+E+LL S + N+ K DILD
Sbjct: 475 FFRDKTTGELIIDDEIIENIYNIFKKEGADAWYDRSIEKLLPESKKHLAKNLEKVEDILD 534
Query: 751 IWFDSGISWSHVLK-------DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFL 803
+WFDSG +W VLK + PA +Y+EG DQ GWF SSLL S A++ AP++++
Sbjct: 535 VWFDSGSTWFAVLKSNRYDAGEYPASMYLEGSDQHRGWFQSSLLVSTAIEKKAPYKSILT 594
Query: 804 HGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGV 863
HGF VDEKG KMSKS GNV++ ++ + +G
Sbjct: 595 HGFTVDEKGEKMSKSKGNVVAPSEVAR-----------------------------KFGT 625
Query: 864 DVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVD 923
++LR WVA + + +G+NIL + +KIR+++R+LL +++ E +D
Sbjct: 626 EILRLWVAT-SDYSSDIKLGENILKQVAEQYRKIRNTIRFLLANINDLEEIKLDNPSMID 684
Query: 924 VYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEAR 983
++L R E + + L+G++ +++A ++L NF+V ELSA Y + KDRLYC+ +N R
Sbjct: 685 KWILARSKEVFDEVVYLFGKYDFSKAFQILNNFIVTELSAIYLDVCKDRLYCEELNSTKR 744
Query: 984 LSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ T+ I LL +AP++ + +E + P
Sbjct: 745 RNSQSTMAIILKELLALLAPVLTYTMDEAVENAP 778
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 218/405 (53%), Gaps = 31/405 (7%)
Query: 4 FSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
FSE +Y ++ G F LHDGPPYANG HIGHA+NKILKDI + QG + YV
Sbjct: 32 FSENVYDRMKQNRKGNDRFNLHDGPPYANGHIHIGHALNKILKDIINKYYYFQGFDIRYV 91
Query: 63 PGWDCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIE + K L IR+ + A + I QK EF+S GV+ DWE
Sbjct: 92 PGWDCHGLPIEQQVEKKLGKEKKESLPKTKIRELCREHASKFIEIQKEEFKSLGVIGDWE 151
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEY--KPDHVS 176
N Y T D E+ + + K+ + KPV+W +TALAE+E+EY K D+
Sbjct: 152 -NPYKTMDFEFEADIYKALSEIAKKGLLVERSKPVFWCMHDKTALAEAEVEYENKEDY-- 208
Query: 177 KSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVI 236
SIY+ L++ L + +IWTTTPW+LPAN IA NP Y + S N I
Sbjct: 209 -SIYVAFPLSEDANKKL-NINNAKIIIWTTTPWTLPANMGIALNPEEAYVLTS---DNYI 263
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VAK E+LK +++ +F +++ I+P+N R+ ++ V+ G+G
Sbjct: 264 VAKKRYEALKEEGVIKGDILKEFSAAEFENLKAINPLN--NRESLIILGEHVTMDGGSGC 321
Query: 297 VHCAPAHGQDDFLLALA-EKIPVLNLITNQGKYSPDAGPGLEGLNILGD---------GK 346
VH AP HG++D+ + L ++ + ++GKYS ++ N+L D
Sbjct: 322 VHTAPGHGEEDYRVWLKYGNSEIIQPVDDEGKYS----EIIKKENLLPDEFVGEHIFKAN 377
Query: 347 DQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
+++L L+ +++ + HSYP+ WR PVI +A++Q+FI ++
Sbjct: 378 EKILELLGDNLVSVSKFTHSYPHCWRCHNPVIFRATKQFFIAMDK 422
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 21/175 (12%)
Query: 1109 ITNQGKYS---------PDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWR 1159
+ ++GKYS PD G + + +++L L+ +++ + HSYP+ WR
Sbjct: 348 VDDEGKYSEIIKKENLLPDEFVGEH----IFKANEKILELLGDNLVSVSKFTHSYPHCWR 403
Query: 1160 TKKPVILKASQQWFIDTER------IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
PVI +A++Q+FI ++ ++ AL +E V F PES K L+ ++ RP WCI
Sbjct: 404 CHNPVIFRATKQFFIAMDKEVEGDTLRNRALNEIEKVEFTPESGKNRLKSMVSNRPDWCI 463
Query: 1214 SRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
SRQR WGVPI F D T +I+++ I++ + + G D W+ +E+LL S
Sbjct: 464 SRQRDWGVPIAFFRDKTTGELIIDDEIIENIYNIFKKEGADAWYDRSIEKLLPES 518
>gi|339301991|ref|ZP_08651064.1| isoleucine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
gi|319744572|gb|EFV96925.1| isoleucine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
Length = 930
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 333/643 (51%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGIL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +EY V + G+ ++A+ LV++L F + ++V G+ L I HP + E
Sbjct: 247 PDMEYVVVAPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHTGKELNHIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + ++G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V LV+ + L +E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 366 G-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+ NF PE KK L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L E+G WW + LL + N K DI+D+WFDSG SW+ V+
Sbjct: 481 -DHVADLFAEYGSIVWWQRDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVM 539
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARENLSYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+ + +G ++LR WV + S +
Sbjct: 600 LGNTILPSDVEK-----------------------------QFGAEILRLWVTSVDSSN- 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V I +IL + + +KIR++LR+L+ + + +++ VD YM + +
Sbjct: 630 DVRISMDILKQTSETYRKIRNTLRFLIANTSDFNPKQDAVAYENLGVVDRYMTIKFNQVV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+T++ Y + + + ++NFV +LSAFY KD +Y ++ N R ++I
Sbjct: 690 DTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
L + + PI+PH AEE++S+L + F V +SG
Sbjct: 750 VKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSG 792
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 231/397 (58%), Gaps = 21/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ALN GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQALNEGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K + + + +++AL ++ Q+ +F+ GV ADWE N Y T
Sbjct: 99 LPIEQVLAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y K+
Sbjct: 158 DYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYANKVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--NVIVAKCLVESL 245
L TD + ++WTTTP+++ A++ + P +EY V + G+ ++A+ LV+SL
Sbjct: 217 GKGIL---DTDTYIVVWTTTPFTVTASRGLTVGPDMEYVVVAPVGSERKYLLAEVLVDSL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F + E+V G+ L I HP + E +L +L V++ GTG+VH AP G
Sbjct: 274 AAKFGWENFEIVTHHTGKELNHIVTEHPWDTEVEELVIL-GDHVTTDSGTGIVHTAPGFG 332
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD----VLWT 360
+DD+ + +A + V+ + ++G +AGP E G D+V LV+ +L +
Sbjct: 333 EDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE-----GQFYDKVTPLVKEKLGDLLLAS 387
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 388 EVINHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ ++G +AGP EG + D+V LV+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDSRGLMMENAGPDFEG-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E NF PE KK L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L E+G WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVADLFAEYGSIVWWQRDAKDLL 504
>gi|392971790|ref|ZP_10337183.1| isoleucine-tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
gi|403046885|ref|ZP_10902354.1| isoleucyl-tRNA synthetase [Staphylococcus sp. OJ82]
gi|392510329|emb|CCI60473.1| isoleucine-tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
gi|402763581|gb|EJX17674.1| isoleucyl-tRNA synthetase [Staphylococcus sp. OJ82]
Length = 916
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 224/623 (35%), Positives = 333/623 (53%), Gaps = 64/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY+ D S SIY+ + + +D +IWTTTPW+LP+N I +
Sbjct: 191 SSLAEAEIEYQ-DKRSASIYVAFDVKDGKGVV---DSDAKFIIWTTTPWTLPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L Y +V G I+ K L VE L W T +++ +F G L+ + HP
Sbjct: 247 PDLTYGQYNVNGKKYIIGKDLASDVVEALGWDENT-LELEKEFKGSELEYVETQHPFVDR 305
Query: 534 QRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ L+ G V++ GTG VH AP HG+DD+++ K+PV++ + ++G ++ +AG
Sbjct: 306 ---VSLVINGLHVTTDAGTGCVHTAPGHGEDDYVVGQKYKLPVISPVDDKGVFTEEAGQ- 361
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ K L E D L E HSYP+DWRTKKPVI +A+ QWF ++++
Sbjct: 362 FEGMFYDKANKAITDVLKEKDALLNLEFITHSYPHDWRTKKPVIFRATPQWFASIDKVRQ 421
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
+ L +E +F + K + + I R W ISRQRVWGVP+PVFY +GD I+ NE +
Sbjct: 422 DILDAIEVTDFKVDWGKTRIFNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTNET-V 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L +E G + W+ + LL + S N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFEEFGSNVWFERDAKDLLPEGFTHPSSPNGEFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D G KMSKS+
Sbjct: 541 GRPELSYPADLYIEGSDQYRGWFNSSITTSVATRGKSPYKMLLSHGFVMDGSGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI I + G D+ R WV++
Sbjct: 601 GNVIVPDQIVKQK-----------------------------GADIARLWVSS-VDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQ- 934
V I IL + D +KIR++LR++LG +++++ +T +++ VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVNDYNPATDALAEADLLEVDKYLLNRLREFTA 690
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
NT+D Y + Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 NTLDH-YDNYDYLDIYQEVQNFINVELSNFYLDYGKDILYIEERDSHKRRSMQTVLYQIV 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH+P
Sbjct: 750 VDMTKLLAPILVHTAEEVWSHIP 772
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 229/390 (58%), Gaps = 20/390 (5%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G P +ILHDGPPYANG H+GHA+NKILKD+ +R ++G YVPGWD HGLPIE +A
Sbjct: 46 GNPSYILHDGPPYANGNLHMGHALNKILKDMMIRYKSMRGFYAPYVPGWDTHGLPIE-QA 104
Query: 77 ITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+T K K LS + RKK + FALE I QK +F+ GV D++ N Y T EY Q
Sbjct: 105 LTKKGVKRKELSIAEFRKKCEAFALEQIENQKKDFKRLGVKGDFD-NPYITLKPEYEAAQ 163
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
+ F + + IY+ KPVYWSPSS ++LAE+E+EY+ D S SIY+ + +
Sbjct: 164 IRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYQ-DKRSASIYVAFDVKDGKGVV- 221
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTF 249
+D +IWTTTPW+LP+N I +P L Y +V G I+ K L VE+L W
Sbjct: 222 --DSDAKFIIWTTTPWTLPSNVAITVHPDLTYGQYNVNGKKYIIGKDLASDVVEALGWDE 279
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDF 308
T +E+ +F G L+ + HP + L+ G V++ GTG VH AP HG+DD+
Sbjct: 280 NT-LELEKEFKGSELEYVETQHPFVDR---VSLVINGLHVTTDAGTGCVHTAPGHGEDDY 335
Query: 309 LLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSY 367
++ K+PV++ + ++G ++ +AG EG+ K L E D L E HSY
Sbjct: 336 VVGQKYKLPVISPVDDKGVFTEEAGQ-FEGMFYDKANKAITDVLKEKDALLNLEFITHSY 394
Query: 368 PYDWRTKKPVILKASQQWFIDTERIKPEAL 397
P+DWRTKKPVI +A+ QWF ++++ + L
Sbjct: 395 PHDWRTKKPVIFRATPQWFASIDKVRQDIL 424
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ ++G ++ +AG EG+ K L E D L E HSYP+DWRTKKPVI +
Sbjct: 349 VDDKGVFTEEAGQ-FEGMFYDKANKAITDVLKEKDALLNLEFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++++ + L +E +F + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASIDKVRQDILDAIEVTDFKVDWGKTRIFNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ NE + H L +E G + W+ + LL
Sbjct: 468 AENGDIIMTNET-VNHVADLFEEFGSNVWFERDAKDLL 504
>gi|418626701|ref|ZP_13189297.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU126]
gi|374831245|gb|EHR94987.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU126]
Length = 916
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFVEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++HG + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKHGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R V++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLCVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILVDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 228/393 (58%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPYITLTPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALSEEVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIQLEKEFTGKELEFVEAQHPF--LDRVSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ +PV++ + ++G ++ + GP EG+ K L E D L ++
Sbjct: 333 DDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L ++HG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKHGSNIWFEKEAKELL 504
>gi|404367837|ref|ZP_10973199.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|313688929|gb|EFS25764.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
Length = 933
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 206/623 (33%), Positives = 324/623 (52%), Gaps = 56/623 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EYK + S SIY+K+K N L + +IWTTTPW+LPAN I N
Sbjct: 193 TALAEAEIEYK-NVSSPSIYVKMKANADLLERLGLTEEAWVVIWTTTPWTLPANVAITLN 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P EY V + N+I+ K L E + +++ +F G+ L+ TY HP R
Sbjct: 252 PEFEYGVYKTEKGNLILGKDLAEKAFTEMDLEQFELIKEFQGKDLERTTYQHPFL--DRT 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTG VH AP HGQDD+++ + +PV++ I N+G + +AG GL
Sbjct: 310 GLIILGTHVTADAGTGCVHTAPGHGQDDYVVGVRYGLPVISPINNKGVLTEEAGE-FAGL 368
Query: 597 NILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKPEA 653
K HL + ++ + +HSYP+DWR++ PVI +A++QWF++ E I+ A
Sbjct: 369 FYAQANKAICAHLEKSGHLMKLKMIEHSYPHDWRSRTPVIFRATEQWFVNVEGSDIRERA 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKH 711
L L++V F+P + + + RP WCISRQRVWGVPIPVF++ T I N+ +
Sbjct: 429 LKALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFFNEATGKEIFNKEILAR 488
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHVLKD 765
++ + G W + E+L+ + + K +I+D+WFDSG+S VL+
Sbjct: 489 IVGIVKKEGTAAWLKYTAEELIGEELMEKYDLKGLELRKETNIMDVWFDSGVSHRAVLET 548
Query: 766 K------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF +SLLTS+ H APF+ + HGFV D +G KMSKSV
Sbjct: 549 RGDLLHRPADMYLEGSDQHRGWFQTSLLTSIGSTHDAPFKKILTHGFVNDGEGKKMSKSV 608
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN + D+ + YG D+LR W A+ ++
Sbjct: 609 GNTVVPSDV-----------------------------IKLYGADILRLWCASVDYRE-D 638
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V I NIL + +++R++ RY+LG ++ +T + +D + L +L +
Sbjct: 639 VKISDNILKQMAEAYRRVRNTARYILGNSNDFDPNTDKVPYEQLMEIDKWALNKLEILKR 698
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +++ + + F ++SAFY ++KDRLY + N R + + I
Sbjct: 699 KVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDIIKDRLYTEGTNSIERRAAQTVMTEILV 758
Query: 996 VLLRTVAPIMPHLAEEVYSHLPS 1018
L + + PI+ +EE++ LP
Sbjct: 759 TLTKMITPILSFTSEEIWETLPE 781
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 240/419 (57%), Gaps = 15/419 (3%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G FILHDGPPYANG HIGHA+NKILKDI L+ L+G +V YVPGWD HGLPIELK
Sbjct: 47 GTQTFILHDGPPYANGEIHIGHALNKILKDIILKYKRLRGYKVPYVPGWDTHGLPIELKV 106
Query: 77 ---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+ SK K +S ++IR+ +A + + Q+ F G+L DWE N Y T EY Q
Sbjct: 107 TEKLGSKAKEMSAVEIRELCAEYAKKWVGIQREGFVRLGILGDWE-NPYLTLKPEYEAKQ 165
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
L F LY+ YI++ LKP+YWSP + TALAE+E+EYK + S SIY+K+K N L
Sbjct: 166 LEVFGELYENGYIFKGLKPIYWSPVTETALAEAEIEYK-NVSSPSIYVKMKANADLLERL 224
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD- 252
+ +IWTTTPW+LPAN I NP EY V + N+I+ K L E +
Sbjct: 225 GLTEEAWVVIWTTTPWTLPANVAITLNPEFEYGVYKTEKGNLILGKDLAEKAFTEMDLEQ 284
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
E++ +F G+ L+ TY HP R ++ V++ GTG VH AP HGQDD+++ +
Sbjct: 285 FELIKEFQGKDLERTTYQHPFL--DRTGLIILGTHVTADAGTGCVHTAPGHGQDDYVVGV 342
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDW 371
+PV++ I N+G + +AG GL K HL + ++ + +HSYP+DW
Sbjct: 343 RYGLPVISPINNKGVLTEEAGE-FAGLFYAQANKAICAHLEKSGHLMKLKMIEHSYPHDW 401
Query: 372 RTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRPGTALAESELEYKPD 430
R++ PVI +A++QWF++ E K + ++ +R G S LE +PD
Sbjct: 402 RSRTPVIFRATEQWFVNVEGSDIRERALKALDDVEFIPAWGRNRIG-----SMLETRPD 455
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I N+G + +AG GL K HL + ++ + +HSYP+DWR++ PVI +
Sbjct: 352 INNKGVLTEEAGE-FAGLFYAQANKAICAHLEKSGHLMKLKMIEHSYPHDWRSRTPVIFR 410
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF++ E I+ AL L+ V F+P + + + RP WCISRQRVWGVPIPV
Sbjct: 411 ATEQWFVNVEGSDIRERALKALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPV 470
Query: 1226 FYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F++ T I N+ + ++ + G W E+L+
Sbjct: 471 FFNEATGKEIFNKEILARIVGIVKKEGTAAWLKYTAEELI 510
>gi|268319697|ref|YP_003293353.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
gi|262398072|emb|CAX67086.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
Length = 939
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 326/623 (52%), Gaps = 66/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 202 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 257
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V G ++ + E+L W D VV G +TY HP+
Sbjct: 258 PKFDYSVVEVNGKKYVIGSQRLSAVAEDLGWK---DYKVVKTLKGTDFDRMTYQHPL--- 311
Query: 534 QRDLK--LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-G 590
D+ ++ +V++ GTGLVH A G+DD+ + +PV + + QG+++ +
Sbjct: 312 -YDVTGLVMNDTYVTADDGTGLVHNATGFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPD 370
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF ++
Sbjct: 371 PDLVGM-FYDDANKVVADKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASIDK 429
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEA 707
+ + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 430 FRDQILAEIEKANFIPTWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVTPE 489
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I+H + ++ G + W++ + E+LL + N K DILD+WFDSG SW+ V
Sbjct: 490 TIEHVAQIFEKEGSNAWYTHTAEELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWAGV 549
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
++++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSK
Sbjct: 550 MQERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSK 609
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI S +D+ + G +++R WVA A
Sbjct: 610 SLGNVI-----------------------SPNDV------IKQMGAEIIRLWVAG-ADTT 639
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + ++IL S + +KIR+++R++L + +I+ VD YM +L
Sbjct: 640 SDVAVSQDILRQSAESYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIKLNRL 699
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y +F + + + +F+ N+LSAFY KD LY D+ + E R S ++++
Sbjct: 700 IEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTVIYDV 759
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EEV+ +L
Sbjct: 760 LVKLTKLMTPILPHTMEEVWGYL 782
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 221/415 (53%), Gaps = 25/415 (6%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 50 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 109
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA E + Q A+F+ GV+ADW+H Y T
Sbjct: 110 LPVEQQLAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDH-PYITLQP 168
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 169 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIKD 227
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +YSV V G ++ + E
Sbjct: 228 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYSVVEVNGKKYVIGSQRLSAVAE 284
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK--LLPAGFVSSSKGTGLVHCAP 301
L W D +VV G +TY HP+ D+ ++ +V++ GTGLVH A
Sbjct: 285 DLGW---KDYKVVKTLKGTDFDRMTYQHPL----YDVTGLVMNDTYVTADDGTGLVHNAT 337
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--DVL 358
G+DD+ + +PV + + QG+++ + P L G+ D V +E +L
Sbjct: 338 GFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPDPDLVGM-FYDDANKVVADKLEKAGALL 396
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+ HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 397 KLSFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPTWGKTR 451
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 401 FTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPTWGKTRLYNMIKDRG 460
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ E+LL
Sbjct: 461 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTHTAEELL 515
>gi|417837779|ref|ZP_12484017.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii pf01]
gi|338761322|gb|EGP12591.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii pf01]
Length = 928
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 326/623 (52%), Gaps = 66/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V G ++ + E+L W D VV G +TY HP+
Sbjct: 247 PKFDYSVVEVNGKKYVIGSQRLSAVAEDLGWE---DYKVVKTLKGTDFDRMTYQHPL--- 300
Query: 534 QRDLK--LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-G 590
D+ ++ +V++ GTGLVH A G+DD+ + +PV + + QG+++ +
Sbjct: 301 -YDVTGLVMNDTYVTADDGTGLVHNATGFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPD 359
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF ++
Sbjct: 360 PDLVGM-FYDDANKVVADKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASIDK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEA 707
+ + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 419 FRDQILAEIEKANFIPAWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVTPE 478
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I+H + ++ G + W++ + E+LL + N K DILD+WFDSG SW+ V
Sbjct: 479 TIEHVAQIFEKEGSNAWYTHTAEELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWAGV 538
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
++++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSK
Sbjct: 539 MQERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSK 598
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI S +D+ + G +++R WVA A
Sbjct: 599 SLGNVI-----------------------SPNDV------IKQMGAEIIRLWVAG-ADTT 628
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + ++IL S + +KIR+++R++L + +I+ VD YM +L
Sbjct: 629 SDVAVSQDILRQSAESYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIKLNRL 688
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y +F + + + +F+ N+LSAFY KD LY D+ + E R S ++++
Sbjct: 689 IEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTVIYDV 748
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EEV+ +L
Sbjct: 749 LVKLTKLMTPILPHTMEEVWGYL 771
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 221/415 (53%), Gaps = 25/415 (6%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA E + Q A+F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 158 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +YSV V G ++ + E
Sbjct: 217 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYSVVEVNGKKYVIGSQRLSAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK--LLPAGFVSSSKGTGLVHCAP 301
L W D +VV G +TY HP+ D+ ++ +V++ GTGLVH A
Sbjct: 274 DLGW---EDYKVVKTLKGTDFDRMTYQHPL----YDVTGLVMNDTYVTADDGTGLVHNAT 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--DVL 358
G+DD+ + +PV + + QG+++ + P L G+ D V +E +L
Sbjct: 327 GFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPDPDLVGM-FYDDANKVVADKLEKAGALL 385
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+ HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 386 KLSFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTR 440
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 390 FTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTRLYNMIKDRG 449
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ E+LL
Sbjct: 450 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTHTAEELL 504
>gi|227877331|ref|ZP_03995404.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
gi|256842893|ref|ZP_05548381.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
gi|293381727|ref|ZP_06627708.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
gi|312977589|ref|ZP_07789336.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
gi|423317798|ref|ZP_17295695.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB049-03]
gi|423321135|ref|ZP_17299007.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB077-07]
gi|227863187|gb|EEJ70633.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
gi|256614313|gb|EEU19514.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
gi|290921774|gb|EFD98795.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
gi|310895328|gb|EFQ44395.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
gi|405596458|gb|EKB69794.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB077-07]
gi|405597734|gb|EKB70985.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB049-03]
Length = 933
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 217/625 (34%), Positives = 321/625 (51%), Gaps = 65/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D+ +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDVSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YS+ V G ++ + E+L W D V+ G +TY HP+ +
Sbjct: 247 PRFDYSLVEVDGKKYVIGSDRLPAIAEDLGWK---DYKVLKQLKGTDFDGMTYKHPLYGK 303
Query: 534 ----QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD- 588
Q L ++ +V+ GTGLVH A G+DD+ + IPV + + QG+++ D
Sbjct: 304 TGVGQYGL-VMNDTYVTDDDGTGLVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKDI 362
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTE 647
P L G+ K L + L ++ HSYP+DWRTKKPV+ +A+ QWF
Sbjct: 363 PDPDLVGMFYDDANKVVADKLKKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASIS 422
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNE 706
+ + + L +E+ NF+P K L + I R W ISRQR WGVP+P+FY D T IV
Sbjct: 423 KFRDQILDQIEQANFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTP 482
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
I H + ++ G + W++ + ++LL + N TK DILD+WFDSG SWS
Sbjct: 483 ETIDHIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSG 542
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V++ + PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMS
Sbjct: 543 VMEKRDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMS 602
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHAS 875
KS+GNVIS +D+ KK+ G +++R WVA A +
Sbjct: 603 KSLGNVISPNDVI---KKM--------------------------GAEIIRLWVAQADTT 633
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
D V +G IL S + +KIR++ RY+L + ++ R VD YM +L
Sbjct: 634 SDVAVSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYADLRSVDQYMEVKLN 691
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
+ Y +F + + + NFV N+LSAFY KD LY D N R S ++
Sbjct: 692 DLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGENSHDRRSMQTVIY 751
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
+ L + + PI+PH EE++ L
Sbjct: 752 DAAVKLAKILTPILPHTMEEIWGFL 776
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 221/406 (54%), Gaps = 23/406 (5%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN GKP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 34 NKLYE-QRLKLNEGKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E + Q A+F+ GV+ADW+ N
Sbjct: 93 GWDTHGLPVEQQLAKQGVDRKTMDRAKYRELCRQYAEEQVQKQMADFKRLGVMADWD-NP 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F +YK+ YIY+ LKPVYWS SS + LAE+E+EY D S IY+
Sbjct: 152 YITLQHDFEAQEIRVFGEMYKKGYIYKGLKPVYWSWSSESTLAEAEVEYH-DIKSPRIYV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK-- 239
+ L +D+ +IWTTTPW++P+N I NP +YS+ V G ++
Sbjct: 211 AFPIKDGKGIL---DSDVSLVIWTTTPWTIPSNVGITVNPRFDYSLVEVDGKKYVIGSDR 267
Query: 240 --CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE----QRDLKLLPAGFVSSSKG 293
+ E L W D +V+ G +TY HP+ + Q L ++ +V+ G
Sbjct: 268 LPAIAEDLGW---KDYKVLKQLKGTDFDGMTYKHPLYGKTGVGQYGL-VMNDTYVTDDDG 323
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD-AGPGLEGLNILGDGKDQVLHL 352
TGLVH A G+DD+ + IPV + + QG+++ D P L G+ K L
Sbjct: 324 TGLVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKDIPDPDLVGMFYDDANKVVADKL 383
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ L + + HSYP+DWRTKKPV+ +A+ QWF + + + L
Sbjct: 384 KKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASISKFRDQIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPV+ +A+ QWF + + + L +E NF+P K L + I R
Sbjct: 395 FTHSYPHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIPSWGKTRLYNMIKDRG 454
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I H + ++ G + W++ ++LL
Sbjct: 455 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIDHIAKIFEKEGSNAWYTHTAKELL 509
>gi|255722089|ref|XP_002545979.1| hypothetical protein CTRG_00760 [Candida tropicalis MYA-3404]
gi|240136468|gb|EER36021.1| hypothetical protein CTRG_00760 [Candida tropicalis MYA-3404]
Length = 974
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 233/658 (35%), Positives = 336/658 (51%), Gaps = 73/658 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL---------NQVPAHLLEGATDLHALIWTTTPWSL 468
TALAE+ELEY H S +I++K + N ++ +G DL LIWT+TPW++
Sbjct: 209 TALAEAELEYNDKHKSVAIHVKFPVTSDKLYDYVNSKGYNVKQG--DLKLLIWTSTPWTI 266
Query: 469 PANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
PAN+ I N + Y++ S ++VAK L E++ + + +FPG ++ YI+
Sbjct: 267 PANKAICINRDMIYTLLSDGKETLVVAKSLAEDVLKIDDSYQLLDIEFPGSVVEGNDYIN 326
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P ++ +L V + GTGLVH AP+HG++D+L+ ++ + + + NQGKY +
Sbjct: 327 PAAEDSIKRPVLHGDHVVETAGTGLVHNAPSHGREDYLVGKKNELVMDSAVDNQGKYIVN 386
Query: 589 A-GPGLEGLNILGDGKDQVLH--------LVEPDVLWTEN--YQHSYPYDWRTKKPVILK 637
A PG + L GD K + L E +L+ N + HSYPYDWR+K PVI +
Sbjct: 387 ALAPGFKKL---GDVKVTEIRTNVLCANILEENGMLFHMNKKFAHSYPYDWRSKTPVIQR 443
Query: 638 ASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY 697
A+ QWF++ E+IKP A+ L +VNF PES L + R WCISRQRVWGVP+P+ Y
Sbjct: 444 ATPQWFVNVEKIKPYAIEALSKVNFYPESGSNRLTSFVENRNEWCISRQRVWGVPLPIVY 503
Query: 698 DGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVT---KSNDILDIW 752
+ DT I++ I H ++ +G D W+ E + V + T K D +D+W
Sbjct: 504 EKDTGKPILDPTVINHIVNKLEMYGTDEWFVTEDEDVSRWLPVEMDGTGYYKGKDTMDVW 563
Query: 753 FDSGISWSHVLKDKP---------AHVYMEGMDQINGWFMSSLLTSV--------ALKHT 795
FDSG SWS + + A VY+EG DQ GWF SSLL + + K
Sbjct: 564 FDSGTSWSTLKSNLEECAESEAPLADVYLEGSDQHRGWFQSSLLNKIIYSGNKGTSFKSV 623
Query: 796 APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGA 855
APF+ V HGF+ D KG KMSKS+GNV S + +G KK
Sbjct: 624 APFKTVITHGFITDGKGQKMSKSIGNVFSPKEAIEGCKK--------------------- 662
Query: 856 KKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSEST 915
P G D LR WVA+ + V +L + +K R + +YLLG LH+ E
Sbjct: 663 PLTPYLGTDGLRLWVASSNYRQ-DVSFTPEVLTRVSEVGKKYRITFKYLLGNLHDFVEPV 721
Query: 916 G--SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
+S +D Y+L L E +++ Y EF ++R + V + LSA YF + KD L
Sbjct: 722 AYEQLSD-LDKYILHSLYELKSSCVGFYDEFNFSRVVAAINTHVNSVLSAIYFDVSKDCL 780
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKV 1031
Y D ++ R S L+ I L +API P L +EV+S S+ S FKV
Sbjct: 781 YTDKVDSLRRRSIQTVLNEIMKTYLALLAPIQPLLTQEVWSEY-SKIANLSEDSVFKV 837
Score = 289 bits (739), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 246/413 (59%), Gaps = 27/413 (6%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLL-QGKRVHYVPG 64
+LY WQR A +GK EF+LHDGPPYANG H+GHA+NKI KDI R L+ + K ++Y PG
Sbjct: 54 DLYEWQRSAKSGKLEFVLHDGPPYANGDLHLGHALNKITKDIINRYQLIFKDKLINYRPG 113
Query: 65 WDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
WDCHGLPIE+K + K S ++IRK + +A I+ Q+ +F+ + ++A++E N Y T
Sbjct: 114 WDCHGLPIEMKVESLGKKFSSAVEIRKACREWAKTMIDRQREQFKEYAIMANFE-NPYIT 172
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D Y NQL F L + + + LKPV+W ++TALAE+ELEY H S +I++K
Sbjct: 173 MDHNYEINQLKIFVKLIENGLLSQQLKPVWWGCETQTALAEAELEYNDKHKSVAIHVKFP 232
Query: 185 ---------LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV 235
+N ++ +G DL LIWT+TPW++PAN+ I N + Y++ S +
Sbjct: 233 VTSDKLYDYVNSKGYNVKQG--DLKLLIWTSTPWTIPANKAICINRDMIYTLLSDGKETL 290
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+VAK L E + + + +FPG ++ YI+P ++ +L V + GTG
Sbjct: 291 VVAKSLAEDVLKIDDSYQLLDIEFPGSVVEGNDYINPAAEDSIKRPVLHGDHVVETAGTG 350
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLH--- 351
LVH AP+HG++D+L+ ++ + + + NQGKY +A PG + LGD K +
Sbjct: 351 LVHNAPSHGREDYLVGKKNELVMDSAVDNQGKYIVNALAPGFKK---LGDVKVTEIRTNV 407
Query: 352 -----LVEPDVLWTEN--YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E +L+ N + HSYPYDWR+K PVI +A+ QWF++ E+IKP A+
Sbjct: 408 LCANILEENGMLFHMNKKFAHSYPYDWRSKTPVIQRATPQWFVNVEKIKPYAI 460
Score = 123 bits (308), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 1109 ITNQGKYSPDA-GPGLEGLN--ILGEGKDQVLH---LVEPDVLWTEN--YQHSYPYDWRT 1160
+ NQGKY +A PG + L + E + VL L E +L+ N + HSYPYDWR+
Sbjct: 377 VDNQGKYIVNALAPGFKKLGDVKVTEIRTNVLCANILEENGMLFHMNKKFAHSYPYDWRS 436
Query: 1161 KKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWG 1220
K PVI +A+ QWF++ E+IKP A+ L VNF PES L + R WCISRQRVWG
Sbjct: 437 KTPVIQRATPQWFVNVEKIKPYAIEALSKVNFYPESGSNRLTSFVENRNEWCISRQRVWG 496
Query: 1221 VPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWW 1255
VP+P+ Y+ DT I++ I H ++ +G D W+
Sbjct: 497 VPLPIVYEKDTGKPILDPTVINHIVNKLEMYGTDEWF 533
>gi|262045859|ref|ZP_06018823.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
gi|260573818|gb|EEX30374.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
Length = 933
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 217/625 (34%), Positives = 321/625 (51%), Gaps = 65/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D+ +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDVSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YS+ V G ++ + E+L W D V+ G +TY HP+ +
Sbjct: 247 PRFDYSLVEVDGKKYVIGSDRLPAIAEDLGWK---DYKVLKQLKGTDFDGMTYKHPLYGK 303
Query: 534 ----QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD- 588
Q L ++ +V+ GTGLVH A G+DD+ + IPV + + QG+++ D
Sbjct: 304 TGVGQYGL-VMNDTYVTDDDGTGLVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKDI 362
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTE 647
P L G+ K L + L ++ HSYP+DWRTKKPV+ +A+ QWF
Sbjct: 363 PDPDLVGMFYDDANKVVADKLKKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASIS 422
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNE 706
+ + + L +E+ NF+P K L + I R W ISRQR WGVP+P+FY D T IV
Sbjct: 423 KFRDQILDQIEQANFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTP 482
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
I H + ++ G + W++ + ++LL + N TK DILD+WFDSG SWS
Sbjct: 483 ETIDHIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSG 542
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V++ + PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMS
Sbjct: 543 VMEKRDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMS 602
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHAS 875
KS+GNVIS +D+ KK+ G +++R WVA A +
Sbjct: 603 KSLGNVISPNDVI---KKM--------------------------GAEIIRLWVAQADTT 633
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
D V +G IL S + +KIR++ RY+L + ++ R VD YM +L
Sbjct: 634 SDVAVSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYADLRSVDQYMEVKLN 691
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
+ Y +F + + + NFV N+LSAFY KD LY D N R S ++
Sbjct: 692 DLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGENSHDRRSMQTVIY 751
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
+ L + + PI+PH EE++ L
Sbjct: 752 DAAVKLAKILTPILPHTMEEIWGFL 776
Score = 253 bits (646), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 221/406 (54%), Gaps = 23/406 (5%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN GKP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 34 NKLYE-QRLKLNEGKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E + Q A+F+ GV+ADW+ N
Sbjct: 93 GWDTHGLPVEQQLAKQGVDRKTMDRAKYRELCRQYAEEQVQKQMADFKRLGVMADWD-NP 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F +YK+ YIY+ LKPVYWS SS + LAE+E+EY D S IY+
Sbjct: 152 YITLQHDFEAQEIRVFGEMYKKGYIYKGLKPVYWSWSSESTLAEAEVEYH-DIKSPRIYV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK-- 239
+ L +D+ +IWTTTPW++P+N I NP +YS+ V G ++
Sbjct: 211 AFPIKDGKGIL---DSDVSLVIWTTTPWTIPSNVGITVNPRFDYSLVEVDGKKYVIGSDR 267
Query: 240 --CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE----QRDLKLLPAGFVSSSKG 293
+ E L W D +V+ G +TY HP+ + Q L ++ +V+ G
Sbjct: 268 LPAIAEDLGW---KDYKVLKQLKGTDFDGMTYKHPLYGKTGVGQYGL-VMNDTYVTDDDG 323
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD-AGPGLEGLNILGDGKDQVLHL 352
TGLVH A G+DD+ + IPV + + QG+++ D P L G+ K L
Sbjct: 324 TGLVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKDIPDPDLVGMFYDDANKVVADKL 383
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ L + + HSYP+DWRTKKPV+ +A+ QWF + + + L
Sbjct: 384 KKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASISKFRDQIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPV+ +A+ QWF + + + L +E NF+P K L + I R
Sbjct: 395 FTHSYPHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIPSWGKTRLYNMIKDRG 454
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I H + ++ G + W++ ++LL
Sbjct: 455 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIDHIAKIFEKEGSNAWYTHTAKELL 509
>gi|384500360|gb|EIE90851.1| hypothetical protein RO3G_15562 [Rhizopus delemar RA 99-880]
Length = 942
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 256/410 (62%), Gaps = 14/410 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ + N K FILHDGPPYANG H GHA+NKI+KDI R LLQG +++Y PGW
Sbjct: 78 DLYPWQLKN-NPKDTFILHDGPPYANGNVHAGHALNKIVKDIINRHKLLQGHKIYYRPGW 136
Query: 66 DCHGLPIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
DCHGLPIELKA I + LS ++IRK AK+ AL ++ QK +F SWG++ DWE N Y
Sbjct: 137 DCHGLPIELKALEQIRQNESTLSAVEIRKLAKSKALFEVDKQKKDFMSWGIMGDWE-NPY 195
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T K++ QL + K+ YIYR LKPVYWSPSS++ALAE+ELEYK +HVS S+Y+
Sbjct: 196 LTLTKDFEMRQLVVLREMIKKGYIYRQLKPVYWSPSSKSALAEAELEYKENHVSTSLYV- 254
Query: 183 IKLNQVPAHL-LEGATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGANVIVAKC 240
Q P + +HALIWTTTPW+LP+N+ I +P L+Y V S G + I+ K
Sbjct: 255 ----QFPIKVDCWKDKQVHALIWTTTPWTLPSNRAICVHPELDYHLVQSQTGQHWIIGKD 310
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+E+L+ + V+ G L +Y HPI+KEQ +L V++ GT LVH A
Sbjct: 311 RLEALQEELDQRLTVLDTVKGSALVGSSYQHPISKEQ--YPVLAGKHVTAESGTALVHTA 368
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG +D+ + LA I + + +GK++ +AGP EG +G + V+ L++ ++
Sbjct: 369 PGHGLEDYEVCLANNIQPFSWVDEEGKFTSEAGPQFEGKFAFREGNETVIELLDASIVKK 428
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVG 410
+Y H YPYDWRTK+PV+L+A+ QWF + E ++ +A + +L G
Sbjct: 429 SDYTHKYPYDWRTKQPVMLRATAQWFANVEDLQKKATSINHIIQVLTEKG 478
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/615 (32%), Positives = 300/615 (48%), Gaps = 119/615 (19%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL-LEGATDLHALIWTTTPWSLPANQFIAF 476
+ALAE+ELEYK +H+S S+Y+ Q P + +HALIWTTTPW+LP+N+ I
Sbjct: 234 SALAEAELEYKENHVSTSLYV-----QFPIKVDCWKDKQVHALIWTTTPWTLPSNRAICV 288
Query: 477 NPALEYS-VASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+P L+Y V S G + I+ K +E L+ + V+ G L +Y HPI+KEQ
Sbjct: 289 HPELDYHLVQSQTGQHWIIGKDRLEALQEELDQRLTVLDTVKGSALVGSSYQHPISKEQ- 347
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+L V++ GT LVH AP HG +D+ + LA I + + +GK++ +AGP EG
Sbjct: 348 -YPVLAGKHVTAESGTALVHTAPGHGLEDYEVCLANNIQPFSWVDEEGKFTSEAGPQFEG 406
Query: 596 LNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
+G + V+ L++ ++ +Y H YPYDWRTK+PV+L+A+ QWF + E ++ +A
Sbjct: 407 KFAFREGNETVIELLDASIVKKSDYTHKYPYDWRTKQPVMLRATAQWFANVEDLQKKA-- 464
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEANIKHFCTL 715
+I H +
Sbjct: 465 ---------------------------------------------------TSINHIIQV 473
Query: 716 IDEHGPDFWWSLSVEQLLNTSDVNSN---VTKSNDILDIWFDSGISWSHV-------LKD 765
+ E G D WW + + + + + D +D+WFDSG SW+ + L
Sbjct: 474 LTEKGTDAWWEEEDDLVFVAPEYRQDGKIYKRGYDTMDVWFDSGTSWTMLQGLFERDLSK 533
Query: 766 KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISA 825
A VY+EG DQ GWF SSLLTS +EKG KMSKS+GN I
Sbjct: 534 PVADVYLEGSDQHRGWFQSSLLTS-------------------NEKGDKMSKSLGNTIEP 574
Query: 826 HDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPTVPIGK 884
IT G K KK PAYG DVLR WVA +KD T IG
Sbjct: 575 ILITAGGK--------------------DKKKNPAYGSDVLRLWVANCDYTKDMT--IGP 612
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHN----HSESTGSISRYVDVYMLKRLCEFQNTMDTL 940
+I+ + D ++KIR++ R+LLG LH+ H + +D YML L ++ + + T
Sbjct: 613 SIIATISDHLRKIRTTARFLLGNLHDFDLKHYVDYNHLQE-IDQYMLHELYKYNHNVTTA 671
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
++ + +A + + NF N LS+FYF ++KDRLY +S + +R L+ + +
Sbjct: 672 MDDYSFNKAVQHVQNFTNNTLSSFYFDVIKDRLYNESQSALSRRMAQTVLYEVLKSYTTS 731
Query: 1001 VAPIMPHLAEEVYSH 1015
++P + H AEE+Y +
Sbjct: 732 ISPFVCHTAEEIYEN 746
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +GK++ +AGP EG EG + V+ L++ ++ +Y H YPYDWRTK+PV+L+A
Sbjct: 390 VDEEGKFTSEAGPQFEGKFAFREGNETVIELLDASIVKKSDYTHKYPYDWRTKQPVMLRA 449
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESA 1197
+ QWF + E ++ +A + + + E
Sbjct: 450 TAQWFANVEDLQKKATSINHIIQVLTEKG 478
>gi|422860637|ref|ZP_16907281.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK330]
gi|327469020|gb|EGF14492.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK330]
Length = 930
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 211/637 (33%), Positives = 330/637 (51%), Gaps = 56/637 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F TD+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWTDVQVLATYRGQELNHIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYHVGVANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+++V F E K L + I R W ISRQR WGVP+P+FY DG I+ +E I+H
Sbjct: 425 DEIDKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTSE-TIEHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLLNT-----SDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L +EHG WW + LL T + N TK DI+D+WFDSG SW+ VL ++
Sbjct: 484 AQLFEEHGSIVWWEREAKDLLPTGFTHPASPNGEFTKETDIMDVWFDSGSSWNGVLVNRP 543
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN
Sbjct: 544 ELTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNT 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ D+ + +G ++LR WV + S + V I
Sbjct: 604 IAPSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRI 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
+IL+ + +KIR++LR+L+ + + + +++ R VD YM R + +T+
Sbjct: 634 SMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIRFNQLVDTIR 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I +
Sbjct: 694 KAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDILVKIT 753
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQY 1035
+ + PI+PH AEE++S+L + F L +
Sbjct: 754 KLLTPILPHTAEEIWSYLEHEEEEFVQLSELPEALTF 790
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+N I KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNHISKDIIIRSKSMTGFYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + ++ K +AL + Q+ +F+ G+ DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKEMDLVEYLKLCHEYALSQVYKQRDDFKRLGMSGDWE-NLY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVQVLATYRGQELNHIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYHVGVANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVVPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY- 1227
QWF + + E L ++ V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIDKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNT 1265
DG I+ +E I+H L +EHG WW + LL T
Sbjct: 469 EDGTPIMTSE-TIEHVAQLFEEHGSIVWWEREAKDLLPT 506
>gi|227889764|ref|ZP_04007569.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
gi|227849628|gb|EEJ59714.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
Length = 939
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 326/623 (52%), Gaps = 66/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 202 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 257
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V G ++ + E+L W D VV G +TY HP+
Sbjct: 258 PKFDYSVVEVNGKKYVIGSQRLSAVAEDLGWK---DYKVVKTLKGTDFDRMTYQHPL--- 311
Query: 534 QRDLK--LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-G 590
D+ ++ +V++ GTGLVH A G+DD+ + +PV + + QG+++ +
Sbjct: 312 -YDVTGLVMNDTYVTADDGTGLVHNATGFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPD 370
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF ++
Sbjct: 371 PDLVGM-FYDDANKVVADKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASIDK 429
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEA 707
+ + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 430 FRDQILAEIEKANFIPTWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVTPE 489
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I+H + ++ G + W++ + E+LL + N K DILD+WFDSG SW+ V
Sbjct: 490 TIEHVAQIFEKEGSNAWYTHTAEELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWAGV 549
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
++++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSK
Sbjct: 550 MQERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSK 609
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI S +D+ + G +++R WVA A
Sbjct: 610 SLGNVI-----------------------SPNDV------IKQMGAEIIRLWVAG-ADTT 639
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + ++IL S + +KIR+++R++L + +I+ VD YM +L
Sbjct: 640 SDVAVSQDILRQSAESYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIKLNRL 699
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y +F + + + +F+ N+LSAFY KD LY D+ + E R S ++++
Sbjct: 700 IEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTVIYDV 759
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EEV+ +L
Sbjct: 760 LVKLTKLMTPILPHTMEEVWGYL 782
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 221/415 (53%), Gaps = 25/415 (6%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 50 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 109
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA E + Q A+F+ GV+ADW+H Y T
Sbjct: 110 LPVEQQLAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDH-PYITLQP 168
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 169 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIKD 227
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +YSV V G ++ + E
Sbjct: 228 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYSVVEVNGKKYVIGSQRLSAVAE 284
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK--LLPAGFVSSSKGTGLVHCAP 301
L W D +VV G +TY HP+ D+ ++ +V++ GTGLVH A
Sbjct: 285 DLGW---KDYKVVKTLKGTDFDRMTYQHPL----YDVTGLVMNDTYVTADDGTGLVHNAT 337
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--DVL 358
G+DD+ + +PV + + QG+++ + P L G+ D V +E +L
Sbjct: 338 GFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPDPDLVGM-FYDDANKVVADKLEKAGALL 396
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+ HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 397 KLSFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPTWGKTR 451
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 401 FTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPTWGKTRLYNMIKDRG 460
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ E+LL
Sbjct: 461 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTHTAEELL 515
>gi|256848733|ref|ZP_05554167.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
gi|256714272|gb|EEU29259.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
Length = 933
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 217/625 (34%), Positives = 321/625 (51%), Gaps = 65/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D+ +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDVSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YS+ V G ++ + E+L W D V+ G +TY HP+ +
Sbjct: 247 PRFDYSLVEVDGKKYVIGSDRLPAIAEDLGWK---DYKVLKQLKGTDFDGMTYKHPLYGK 303
Query: 534 ----QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD- 588
Q L ++ +V+ GTGLVH A G+DD+ + IPV + + QG+++ D
Sbjct: 304 TGVGQYGL-VMNDTYVTDDDGTGLVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKDI 362
Query: 589 AGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTE 647
P L G+ K L + L ++ HSYP+DWRTKKPV+ +A+ QWF
Sbjct: 363 PDPDLVGMFYDDANKVVADKLKKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASIS 422
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNE 706
+ + + L +E+ NF+P K L + I R W ISRQR WGVP+P+FY D T IV
Sbjct: 423 KFRDQILDQIEQANFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTP 482
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
I H + ++ G + W++ + ++LL + N TK DILD+WFDSG SWS
Sbjct: 483 ETIDHIAKIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSG 542
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V++ + PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMS
Sbjct: 543 VMEKRDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMS 602
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHAS 875
KS+GNVIS +D+ KK+ G +++R WVA A +
Sbjct: 603 KSLGNVISPNDVI---KKM--------------------------GAEIIRLWVAQADTT 633
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
D V +G IL S + +KIR++ RY+L + ++ R VD YM +L
Sbjct: 634 SDVAVSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYADLRSVDQYMEVKLN 691
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
+ Y +F + + + NFV N+LSAFY KD LY D N R S ++
Sbjct: 692 DLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGENSHDRRSMQTVIY 751
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
+ L + + PI+PH EE++ L
Sbjct: 752 DAAVKLAKILTPILPHTMEEIWGFL 776
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 224/422 (53%), Gaps = 23/422 (5%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN KP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 34 NKLYE-QRLKLNEDKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E + Q A+F+ GV+ADW+ N
Sbjct: 93 GWDTHGLPVEQQLAKQGVDRKTMDRAKYRELCRQYAEEQVQKQMADFKRLGVMADWD-NP 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F +YK+ YIY+ LKPVYWS SS + LAE+E+EY D S IY+
Sbjct: 152 YITLQHDFEAQEIRVFGEMYKKGYIYKGLKPVYWSWSSESTLAEAEVEYH-DIKSPRIYV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK-- 239
+ L +D+ +IWTTTPW++P+N I NP +YS+ V G ++
Sbjct: 211 AFPIKDGKGIL---DSDVSLVIWTTTPWTIPSNVGITVNPRFDYSLVEVDGKKYVIGSDR 267
Query: 240 --CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE----QRDLKLLPAGFVSSSKG 293
+ E L W D +V+ G +TY HP+ + Q L ++ +V+ G
Sbjct: 268 LPAIAEDLGW---KDYKVLKQLKGTDFDGMTYKHPLYGKTGVGQYGL-VMNDTYVTDDDG 323
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD-AGPGLEGLNILGDGKDQVLHL 352
TGLVH A G+DD+ + IPV + + QG+++ D P L G+ K L
Sbjct: 324 TGLVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKDIPDPDLVGMFYDDANKVVADKL 383
Query: 353 VEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGI 411
+ L + + HSYP+DWRTKKPV+ +A+ QWF + + + L N + G
Sbjct: 384 KKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIPSWGK 443
Query: 412 TH 413
T
Sbjct: 444 TR 445
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPV+ +A+ QWF + + + L +E NF+P K L + I R
Sbjct: 395 FTHSYPHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIPSWGKTRLYNMIKDRG 454
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I H + ++ G + W++ ++LL
Sbjct: 455 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIDHIAKIFEKEGSNAWYTHTAKELL 509
>gi|314933369|ref|ZP_07840734.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
gi|313653519|gb|EFS17276.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
Length = 916
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 324/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFNIKDDKGVV---DSDAKFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVEN----LKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L+Y +V G IVA+ L E L W ++ I + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGQKYIVAQALSETVADALGWDKES-IQLEKEFTGKELEYVEAQHPF--L 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HG+DD+++ ++PV++ + ++G ++ + G
Sbjct: 304 DRTSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPLDDKGVFTEEGGQ-F 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EG+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 363 EGMFYDKANKAVTDLLTEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQD 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +EE NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 423 ILDAIEETNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 482 HIADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRSVLET 541
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+G
Sbjct: 542 RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI + + G D+ R WV++ V
Sbjct: 602 NVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I IL + D +KIR++LR++LG +++++ + I VD Y+L RL EF +
Sbjct: 632 RISDEILKQTSDVYRKIRNTLRFMLGNINDYNPESDYIPENELLDVDRYLLNRLREFTAS 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 692 TINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILTD 751
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
+ + ++PI+ H AEEV+SH P
Sbjct: 752 MTKLLSPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 231/398 (58%), Gaps = 18/398 (4%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G +ILHDGPPYANG+ H+GHA+NKI+KD +R +QG YVPGWD
Sbjct: 37 YKKALEKNKGNQSYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FAL+ ++ QK +F+ GV D++ N Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSIAEFREKCKEFALKQVDIQKKDFKRLGVRGDFD-NPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFN 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+
Sbjct: 214 IKDDKGVV---DSDAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGQKYIVAQALSET 270
Query: 245 ----LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L W ++ I++ +F G+ L+ + HP R ++ V++ GTG VH A
Sbjct: 271 VADALGWDKES-IQLEKEFTGKELEYVEAQHPF--LDRTSLVINGEHVTTDAGTGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+++ ++PV++ + ++G ++ + G EG+ K L E D L
Sbjct: 328 PGHGEDDYIVGQKYELPVISPLDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 387 LDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + G EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEETNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHIADLFAEHGSNIWFEREAKDLL 504
>gi|418616614|ref|ZP_13179538.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU120]
gi|374820692|gb|EHR84768.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU120]
Length = 916
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L+Y +V G IVA+ L E + D D + +F G+ L+ I HP
Sbjct: 247 PELKYGQYNVDGHKYIVAQALSEEVAEALGWDKDSIQLEKEFTGKELEFIEAQHPF--LD 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + GP E
Sbjct: 305 RVSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+ NF + K + + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +++G + W+ ++LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEKYGSNIWFEKEAKELLPEGFSHPGSPNGEFTKETDIMDVWFDSGSSHRGVLETR 542
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D + KMSKS+GN
Sbjct: 543 PELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEDKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI + + G D+ R WV++ V
Sbjct: 603 VIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLSDVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTAST 692
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F Y + + NF+ ELS FY KD LY + + R S L+ I +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDM 752
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
+ +API+ H AEEV+SH P
Sbjct: 753 TKLLAPILVHTAEEVWSHTP 772
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 230/400 (57%), Gaps = 18/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
E Y E P FILHDGPPYANG H+GHA+NKI+KD +R +QG YVPGW
Sbjct: 35 EQYRKALEKNKNNPSFILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K K FAL+ I+ QK +F+ GV D+ +N Y
Sbjct: 95 DTHGLPIE-QALTKKGVDRKKMSVAEFREKCKEFALKQIDIQKKDFKRLGVRGDF-NNPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ + +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L
Sbjct: 212 FDVKDSKGKV---DSDAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGHKYIVAQALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L W + I++ +F G+ L+ I HP R ++ V++ GTG VH
Sbjct: 269 EEVAEALGWD-KDSIQLEKEFTGKELEFIEAQHPF--LDRVSLVINGEHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ +PV++ + ++G ++ + GP EG+ K L E D L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + GP EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGP-FEGMFYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEDTNFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEKYGSNIWFEKEAKELL 504
>gi|403213411|emb|CCK67913.1| hypothetical protein KNAG_0A02240 [Kazachstania naganishii CBS 8797]
Length = 1025
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 227/655 (34%), Positives = 343/655 (52%), Gaps = 82/655 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLL----------EGATDLHALIWTTTPWS 467
TALAESELEYK DH+S+++Y+K L L T + LIWT+TPW+
Sbjct: 236 TALAESELEYKEDHVSQTVYVKFPLTADSQQRLLVLAPLKTPITPNTRIQCLIWTSTPWT 295
Query: 468 LPANQFIAFNPALEYSVA--SVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDIT 525
L +NQ I +N +EY + S + +I+++ L++ + D +++ +F G L ++
Sbjct: 296 LFSNQAICYNDGMEYVLVHLSQRDEYLIISRDLLDQVG--IAQDYEILSEFTGACLSNLK 353
Query: 526 YIHPIN-KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGK 584
Y +P+ + LLP G V++ GTGLVH AP HG +D+++ + + + + I ++G
Sbjct: 354 YTNPMCLGGTTEFPLLPGGHVTNVTGTGLVHTAPGHGNEDYMVGIQNNLQIYSPIDHEGN 413
Query: 585 Y-----SPDAGPGLEGLNILGDGKDQVL-----HLVE-----PDVLWTENYQHSYPYDWR 629
Y SP+ P L+ N G++ +L H++E + ++Y HSYPYDWR
Sbjct: 414 YDLNEVSPELRPILQDPNDPQKGRNVLLSSTTTHIIEFLEGQGMLFQQKSYTHSYPYDWR 473
Query: 630 TKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVW 689
+KKPVI++++ QWF + IK AL+ L V + P L I R WCISRQR W
Sbjct: 474 SKKPVIIRSTPQWFTNLTDIKQLALSSLHNVEYTPLRGHNRLEAFIKTRNEWCISRQRSW 533
Query: 690 GVPIPVFYDG---DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLN-----TSDVNSN 741
GVPIP F D ++++ I H ++I+ G D W+ S E + V
Sbjct: 534 GVPIPFFQHKTVPDKVLMDSNLIDHVISVIERDGIDSWFE-SEEDISKWFPDEYKSVAHE 592
Query: 742 VTKSNDILDIWFDSGISWSHVLKD-------------KPAHVYMEGMDQINGWFMSSLLT 788
K D +D+WFDSG SW+ VL+D + A+VY+EG DQ GWF SSLLT
Sbjct: 593 YVKGKDTMDVWFDSGSSWT-VLRDFYRDVLKLDKCPEQLANVYLEGSDQHRGWFQSSLLT 651
Query: 789 SVALKHT--APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVI 846
VA T APF ++ HGF++D KG KMSKS+GNVIS D+ +G K+
Sbjct: 652 RVASSGTPFAPFHHLITHGFILDSKGIKMSKSIGNVISPKDVIRGNTKV----------- 700
Query: 847 SAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLG 906
+LPA GVD LR++VA + + G +++ D ++K+R + ++LLG
Sbjct: 701 ----------ELPAVGVDGLRYFVAQSDFTN-DITCGSTVMHRINDSLKKLRLTFKFLLG 749
Query: 907 VLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELS 962
L N S+ + R VD Y+L L + + Y F + + L + NELS
Sbjct: 750 NL-NTSQRPILLPIEQLRPVDKYILFTLQDLVSNAKQNYETFNFGKVLGALQFHLNNELS 808
Query: 963 AFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ YF + KD LYCD R TL +I + +API+P L +EV++++P
Sbjct: 809 SLYFDICKDSLYCDPEASLKRRQIHTTLFHILNTYRALLAPILPMLVQEVWNNVP 863
Score = 296 bits (757), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 249/424 (58%), Gaps = 39/424 (9%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLL-QGKRVHYVP 63
SE + + E L F+LHDGPPYANG H+GHA+NK+LKDI +R LL QG+ V++ P
Sbjct: 83 SERFKFAAERL-----FVLHDGPPYANGDLHLGHALNKVLKDIIVRYQLLAQGRHVYFKP 137
Query: 64 GWDCHGLPIELKAITSKDK--LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWDCHGLPIELKAI DK +SP+ IR A+ A +T+ Q+ +F +G+ DWE +
Sbjct: 138 GWDCHGLPIELKAIKQNDKGKRMSPVQIRSIARRHAEKTVLIQRDQFTQFGICTDWE-DP 196
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T + ++ NQL F L+ I R KPVYW +RTALAESELEYK DHVS+++Y+
Sbjct: 197 YITMNAQFEINQLKVFSQLFHLGLIKRQNKPVYWGTETRTALAESELEYKEDHVSQTVYV 256
Query: 182 KIKLNQVPAHLL----------EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA--S 229
K L L T + LIWT+TPW+L +NQ I +N +EY + S
Sbjct: 257 KFPLTADSQQRLLVLAPLKTPITPNTRIQCLIWTSTPWTLFSNQAICYNDGMEYVLVHLS 316
Query: 230 VKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPIN-KEQRDLKLLPAGFV 288
+ +I+++ L++ + D E++ +F G L ++ Y +P+ + LLP G V
Sbjct: 317 QRDEYLIISRDLLDQVG--IAQDYEILSEFTGACLSNLKYTNPMCLGGTTEFPLLPGGHV 374
Query: 289 SSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY-----SPDAGPGLEGLNILG 343
++ GTGLVH AP HG +D+++ + + + + I ++G Y SP+ P L+ N
Sbjct: 375 TNVTGTGLVHTAPGHGNEDYMVGIQNNLQIYSPIDHEGNYDLNEVSPELRPILQDPNDPQ 434
Query: 344 DGKDQVL-----HLVE-----PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 393
G++ +L H++E + ++Y HSYPYDWR+KKPVI++++ QWF + IK
Sbjct: 435 KGRNVLLSSTTTHIIEFLEGQGMLFQQKSYTHSYPYDWRSKKPVIIRSTPQWFTNLTDIK 494
Query: 394 PEAL 397
AL
Sbjct: 495 QLAL 498
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 18/165 (10%)
Query: 1109 ITNQGKY-----SPDAGPGLEGLNILGEGKDQVL-----HLVE-----PDVLWTENYQHS 1153
I ++G Y SP+ P L+ N +G++ +L H++E + ++Y HS
Sbjct: 408 IDHEGNYDLNEVSPELRPILQDPNDPQKGRNVLLSSTTTHIIEFLEGQGMLFQQKSYTHS 467
Query: 1154 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
YPYDWR+KKPVI++++ QWF + IK AL+ L V + P L I R WCI
Sbjct: 468 YPYDWRSKKPVIIRSTPQWFTNLTDIKQLALSSLHNVEYTPLRGHNRLEAFIKTRNEWCI 527
Query: 1214 SRQRVWGVPIPVFYDG---DTIIVNEANIKHFCTLIDEHGPDFWW 1255
SRQR WGVPIP F D ++++ I H ++I+ G D W+
Sbjct: 528 SRQRSWGVPIPFFQHKTVPDKVLMDSNLIDHVISVIERDGIDSWF 572
>gi|197120011|ref|YP_002140438.1| isoleucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|197089371|gb|ACH40642.1| isoleucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 925
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 217/639 (33%), Positives = 330/639 (51%), Gaps = 61/639 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFI 474
GTALAE+E+EY DH S S+++K L + ++ A +IWTTTPW+LPAN I
Sbjct: 191 GTALAEAEVEY-ADHKSPSVFVKFPLKEELGSVVPELAGKKASMVIWTTTPWTLPANLAI 249
Query: 475 AFNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
A +P L+Y ++ +V IVA L E+ + +++ FP + L+ HP
Sbjct: 250 AIHPDLDYVALKLESGDVVIVADGLKESFLKEIGAEGELLAKFPSRLLEKRLARHPFY-- 307
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
++D +L V+ GTG VH AP HGQ+D+ L L E + + N + N+G++ +
Sbjct: 308 EQDSVILLGEHVTLEAGTGCVHTAPGHGQEDYELGLKEGLDIYNPVDNRGRFYENI-QFF 366
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTER--IK 650
G + K+ + L+E L + HSYP+ WR KKP+I +A++QWFI ER ++
Sbjct: 367 GGQFVFDANKNVIEKLIEVGALLGQKEISHSYPHCWRCKKPIIFRATEQWFISMERNDLR 426
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
+AL + VN++P+ ++ + I RP WC+SRQR WGVPI FY ++ +
Sbjct: 427 GKALEAINSVNWIPKWGRERIYGMIENRPDWCVSRQRSWGVPITAFYCKSCGNVLADGKI 486
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVL 763
+ L EH D W+ + L S K DILD+WFDSG+S + VL
Sbjct: 487 MHQIADLFAEHTSDIWYDWEASRFLPEGTCCPSCGKSEFDKETDILDVWFDSGVSHAAVL 546
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSLL SV + AP++NV HGFV+D G KMSKS
Sbjct: 547 ELRDNLSSPADMYLEGSDQHRGWFHSSLLASVGTRGRAPYKNVLTHGFVMDGAGRKMSKS 606
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
VGNV++ D+ + +G DVLR WVAA +D
Sbjct: 607 VGNVVAPEDV-----------------------------IKKFGGDVLRLWVAAQDYRD- 636
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKR-----LCEF 933
+ I + IL + ++IR++ RY+LG +++ + T ++ Y D+ L R L
Sbjct: 637 DLRISQEILTRLSESYRRIRNTCRYILGNINDFNPDTDLVA-YADMPELDRWAMHQLELL 695
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y + ++ + F E+SAFY ++KDR+Y + AR SG ++ I
Sbjct: 696 KEKVLASYKDSEFHILYHAVNGFCTVEMSAFYLDILKDRVYTSKSSSVARRSGQTVMYLI 755
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVY 1032
L+R VAP++ AEEV++ +P GT S H +
Sbjct: 756 LDALVRMVAPVLSFTAEEVWAEMP---GTRESSVHLAQF 791
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 219/386 (56%), Gaps = 12/386 (3%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
EA KP ++LHDGPPYANG HIGHA+NKILKDI L+S ++G YVPGWDCHGLPI
Sbjct: 42 EAGKSKPRYVLHDGPPYANGHIHIGHALNKILKDIVLKSKRMEGFAAPYVPGWDCHGLPI 101
Query: 73 EL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
EL K + SK +S L++RK + +A + + Q+AEFE G+ +W+ Y T + Y
Sbjct: 102 ELQVEKNLGSKKHEISKLEMRKLCREYAAKFVAIQRAEFERLGIFGEWD-TPYLTMNASY 160
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
+ + +Y+ KPV+W S TALAE+E+EY DH S S+++K L +
Sbjct: 161 EGAIARELARFAENGGLYKGKKPVHWCSSCGTALAEAEVEY-ADHKSPSVFVKFPLKEEL 219
Query: 190 AHLLE--GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-VIVAKCLVESLK 246
++ +IWTTTPW+LPAN IA +P L+Y ++ + VIVA L ES
Sbjct: 220 GSVVPELAGKKASMVIWTTTPWTLPANLAIAIHPDLDYVALKLESGDVVIVADGLKESFL 279
Query: 247 WTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
+ E++ FP + L+ HP ++D +L V+ GTG VH AP HGQ+
Sbjct: 280 KEIGAEGELLAKFPSRLLEKRLARHPFY--EQDSVILLGEHVTLEAGTGCVHTAPGHGQE 337
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQH 365
D+ L L E + + N + N+G++ + G + K+ + L+E L + H
Sbjct: 338 DYELGLKEGLDIYNPVDNRGRFYENI-QFFGGQFVFDANKNVIEKLIEVGALLGQKEISH 396
Query: 366 SYPYDWRTKKPVILKASQQWFIDTER 391
SYP+ WR KKP+I +A++QWFI ER
Sbjct: 397 SYPHCWRCKKPIIFRATEQWFISMER 422
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + N+G++ + G + K+ + L+E L + HSYP+ WR KKP+I
Sbjct: 351 NPVDNRGRFYENI-QFFGGQFVFDANKNVIEKLIEVGALLGQKEISHSYPHCWRCKKPII 409
Query: 1166 LKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+A++QWFI ER ++ +AL + VN++P+ ++ + I RP WC+SRQR WGVPI
Sbjct: 410 FRATEQWFISMERNDLRGKALEAINSVNWIPKWGRERIYGMIENRPDWCVSRQRSWGVPI 469
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSN 1276
FY ++ + + L EH D W+ + L + KS
Sbjct: 470 TAFYCKSCGNVLADGKIMHQIADLFAEHTSDIWYDWEASRFLPEGTCCPSCGKSE 524
>gi|25010601|ref|NP_734996.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|81457393|sp|Q8E6N1.1|SYI_STRA3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|23094954|emb|CAD46176.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
Length = 930
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 333/643 (51%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGIL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +EY V + G+ ++A+ LV++L F + ++V G+ L I HP + E
Sbjct: 247 PDMEYVVVAPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHTGKELNHIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + ++G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V LV+ + L +E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 366 G-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+ NF PE KK L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L E+G WW + LL + N K DI+D+WFDSG SW+ V+
Sbjct: 481 -DHVADLFAEYGSIVWWQRDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVM 539
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARENLSYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+ + +G ++LR WV + S +
Sbjct: 600 LGNTILPSDVEK-----------------------------QFGAEILRLWVTSVDSSN- 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V I +IL + + +KIR++LR+L+ + + +++ VD YM + +
Sbjct: 630 DVRISMDILKQTSEIYRKIRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTIKFNQVV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+T++ Y + + + ++NFV +LSAFY KD +Y ++ N R ++I
Sbjct: 690 DTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
L + + PI+PH AEE++S+L + F V +SG
Sbjct: 750 VKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSG 792
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 231/397 (58%), Gaps = 21/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ALN GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQALNEGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K + + + +++AL ++ Q+ +F+ GV ADWE N Y T
Sbjct: 99 LPIEQVLAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y K+
Sbjct: 158 DYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYANKVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--NVIVAKCLVESL 245
L TD + ++WTTTP+++ A++ + P +EY V + G+ ++A+ LV+SL
Sbjct: 217 GKGIL---DTDTYIVVWTTTPFTVTASRGLTVGPDMEYVVVAPVGSERKYLLAEVLVDSL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F + E+V G+ L I HP + E +L +L V++ GTG+VH AP G
Sbjct: 274 AAKFGWENFEIVTHHTGKELNHIVTEHPWDTEVEELVIL-GDHVTTDSGTGIVHTAPGFG 332
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD----VLWT 360
+DD+ + +A + V+ + ++G +AGP E G D+V LV+ +L +
Sbjct: 333 EDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE-----GQFYDKVTPLVKEKLGDLLLAS 387
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 388 EVINHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ ++G +AGP EG + D+V LV+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDSRGLMMENAGPDFEG-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E NF PE KK L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L E+G WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVADLFAEYGSIVWWQRDAKDLL 504
>gi|317121723|ref|YP_004101726.1| isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
gi|315591703|gb|ADU50999.1| Isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
Length = 946
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 216/624 (34%), Positives = 322/624 (51%), Gaps = 58/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY+ + S SIY+ + L GA +IWTTTPW++PAN IA +
Sbjct: 192 TALAEAEIEYR-EKTSPSIYVAFDVVDGRGRLRAGA---RLVIWTTTPWTIPANLAIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCD-FPGQYLQDITYIHPINKEQRD 536
P Y ++VA+ LVE + + D + G L+ +TY HP+ R
Sbjct: 248 PEARYVAVETDRGLLVVAEPLVERVLQAARLDERGRSGPWTGAELEGVTYRHPLF--DRT 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ A VS +GTGLVH AP HGQ+DF + +PVL+ + ++G+++ +AGP GL
Sbjct: 306 SPVVLAEHVSMEEGTGLVHTAPGHGQEDFEVGRRYGLPVLSPVDDRGRFTEEAGP-FAGL 364
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
D ++ +E +L +H Y + WR ++PVI +A+ QWF E + +AL
Sbjct: 365 -FYADANPHIIRALEEAGALLADGTIRHQYAHCWRCRQPVIFRATTQWFASVEGFRQKAL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++ V ++PE + +R+ +A R WCISRQR WGVPIPVFY ++ E +I+
Sbjct: 424 ETIDRVRWIPEWGRDRIRNMVADRGDWCISRQRAWGVPIPVFYCEACQEPVITEESIRAV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTS------DVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L G + W+ ++L DI+D+WFDSG S + VL+ +
Sbjct: 484 AALFRREGSNAWFLREAAEILPAGFTCPHCGSRQGFRNETDIMDVWFDSGSSHAAVLETR 543
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y+EG DQ GWF SSLLT+VA + AP+R V HGFVVD +G KMSKS+GN
Sbjct: 544 PELAWPADLYLEGSDQHRGWFQSSLLTAVATRGQAPYRAVLTHGFVVDGEGRKMSKSLGN 603
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
V+ +D+ + YG DVLR W A + V
Sbjct: 604 VVDPNDVIR-----------------------------RYGADVLRLW-AVSSDYRGDVR 633
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTM 937
I ++IL + +KIR++LR+LLG L + + +++ +D + L RL + +
Sbjct: 634 ISEDILKQMAEIYRKIRNTLRFLLGNLGDFDPARDAVAYDQLPELDRWALARLAQVTERV 693
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+QY + NF V +LSAFY ++KDRLY R + L+ + L
Sbjct: 694 RRAYDEYQYHVLYHTIHNFCVTDLSAFYLDVLKDRLYASLPADPGRRAAQTVLYQLARTL 753
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQG 1021
+AP++ H AEEV+ HLP G
Sbjct: 754 TLLLAPVLCHTAEEVWGHLPRVDG 777
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 218/385 (56%), Gaps = 15/385 (3%)
Query: 19 PEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT 78
P F+LHDGPPYANG H+G A+NK+LKD+ +R + G YVPGWD HGLPIE +A+
Sbjct: 48 PRFVLHDGPPYANGDIHVGTALNKVLKDVVVRYASMAGYDAPYVPGWDTHGLPIERRALE 107
Query: 79 ---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
+ +SP+++R + +AL+ +N Q+ +F GVL DWE Y T + EY Q+
Sbjct: 108 VLGVDRRAISPVELRNHCRAYALDQMNRQRQQFRRLGVLGDWERP-YLTLEPEYEAKQVE 166
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG 195
F + ++ YIYR L VYW P TALAE+E+EY+ + S SIY+ + L G
Sbjct: 167 VFGEMARRGYIYRSLYSVYWCPVDETALAEAEIEYR-EKTSPSIYVAFDVVDGRGRLRAG 225
Query: 196 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEV 255
A +IWTTTPW++PAN IA +P Y ++VA+ LVE + + D
Sbjct: 226 A---RLVIWTTTPWTIPANLAIAVHPEARYVAVETDRGLLVVAEPLVERVLQAARLDERG 282
Query: 256 VCD-FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
+ G L+ +TY HP+ R ++ A VS +GTGLVH AP HGQ+DF +
Sbjct: 283 RSGPWTGAELEGVTYRHPLF--DRTSPVVLAEHVSMEEGTGLVHTAPGHGQEDFEVGRRY 340
Query: 315 KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWR 372
+PVL+ + ++G+++ +AGP GL D ++ +E +L +H Y + WR
Sbjct: 341 GLPVLSPVDDRGRFTEEAGP-FAGL-FYADANPHIIRALEEAGALLADGTIRHQYAHCWR 398
Query: 373 TKKPVILKASQQWFIDTERIKPEAL 397
++PVI +A+ QWF E + +AL
Sbjct: 399 CRQPVIFRATTQWFASVEGFRQKAL 423
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPV 1164
L+ + ++G+++ +AGP GL + L E L + +H Y + WR ++PV
Sbjct: 345 LSPVDDRGRFTEEAGP-FAGLFYADANPHIIRALEEAGALLADGTIRHQYAHCWRCRQPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF E + +AL ++ V ++PE + +R+ +A R WCISRQR WGVPIP
Sbjct: 404 IFRATTQWFASVEGFRQKALETIDRVRWIPEWGRDRIRNMVADRGDWCISRQRAWGVPIP 463
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY ++ E +I+ L G + W+ ++L
Sbjct: 464 VFYCEACQEPVITEESIRAVAALFRREGSNAWFLREAAEIL 504
>gi|336364148|gb|EGN92511.1| hypothetical protein SERLA73DRAFT_172840 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388296|gb|EGO29440.1| hypothetical protein SERLADRAFT_445261 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1025
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 224/659 (33%), Positives = 342/659 (51%), Gaps = 89/659 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKI-------KLNQVPAHLLEGATDLHALIWTTTPWSLPA 470
+ALAE+EL YK DH+S S+Y+ K++ V +L L+WTTTPW+L A
Sbjct: 228 SALAEAELTYKDDHVSHSVYVSYSLDLKAEKMSTVLREILAQEPRADLLVWTTTPWTLTA 287
Query: 471 NQFIAFNPALEYSVASVKGAN----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITY 526
N IA +P L Y+V GA +IVAK + +L I+V+ D G L D Y
Sbjct: 288 NMGIAVHPELTYTVLRRNGAPGNGVLIVAKDRILSLTEVVGP-IEVIADIKGSDLVDAPY 346
Query: 527 IHPINKEQRDL-----KLLPAGFVSSSKGTGLVHCAPAHGQDDF-------LLALAEKIP 574
+ P+ + K++PA V+S GTGLVHCAPAHG +D+ L+
Sbjct: 347 L-PLFSPSGAIVPIPYKIIPASHVTSDSGTGLVHCAPAHGGEDYQAFRTLGLINSHNPNS 405
Query: 575 VLNLITNQGKYS--------PDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSY 624
++ + GK++ +A + G +L DG ++ L+E ++ + +H Y
Sbjct: 406 IICHVDEAGKFTHKVADVVGEEAALTVIGQEVLKDGGKAIVKLLEHTGKLVKVQRIKHRY 465
Query: 625 PYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCIS 684
PYDW+T +P+I+ A+ QWF + + IK +AL L++V F P +++ L + R WCIS
Sbjct: 466 PYDWKTNEPIIVIATSQWFANLDNIKDDALNALKDVIFFPPASRNRLESFVRSRSEWCIS 525
Query: 685 RQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLN---TSDVN 739
RQRVWGVPIP Y+ T ++N ++ H +++E G +WW VE L ++
Sbjct: 526 RQRVWGVPIPALYNAHTNQPVLNTESLDHILKVLEEKGVAYWWDGPVEDFLTPQLEAEGG 585
Query: 740 SNV-TKSNDILDIWFDSGISWSH---VLKDKP-----AHVYMEGMDQINGWFMSSLLTSV 790
+N K D +D+WFDSG SWS + +D P A + +EG DQ GWF S LLT++
Sbjct: 586 ANAWRKGTDTMDVWFDSGTSWSMLKALKEDTPSRQFEADICLEGSDQHRGWFQSQLLTAI 645
Query: 791 ---ALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVIS 847
+ + ++P+ + HG V+D++G KMSKS+GN+IS I G K
Sbjct: 646 GSASEQPSSPYATLITHGMVLDQEGKKMSKSLGNIISPMTIINGGKD------------- 692
Query: 848 AHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLG 906
KK PAYG DVLR WVA +D + IG +L+ + ++KIR+S R++LG
Sbjct: 693 -------KKKEPAYGADVLRLWVATVEYWRD--MSIGPTVLSQVAESMRKIRNSARFILG 743
Query: 907 VLHN----------HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNF 956
+ + E G RYV + L + + Y + + + L NF
Sbjct: 744 NIGDIDSRKNFQRVEKEDLGLAERYV----MHELYKLEKVAHEGYASYNFPKVINSLTNF 799
Query: 957 VVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
LS+ YF + KD LY DS++ R + + L NI + ++ +AP++PHLAEE++ H
Sbjct: 800 ANLTLSSLYFDITKDCLYADSVHSMKRRAVVTVLENILNSIISVMAPVLPHLAEEIHFH 858
Score = 292 bits (748), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 246/429 (57%), Gaps = 40/429 (9%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY WQ E +G P F++HDGPPYANG H+GHA+NKI+KDI R ++L G RVHY PGW
Sbjct: 70 ELYRWQWENADG-PLFVMHDGPPYANGHLHMGHALNKIIKDIINRYHVLLGDRVHYFPGW 128
Query: 66 DCHGLPIELKAITS--KDKLLSPLD-IRKKAKNFALETINTQKAEFESWGVLADWE-HNC 121
DCHGLPIE KA+ KD L P + IR AK A + TQK EFE +G++ADW +
Sbjct: 129 DCHGLPIENKALQELRKDALSLPANTIRSVAKATAEREMKTQKDEFEHFGIMADWSTEST 188
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D +Y QL F + ++ IYR +PV++SPSS +ALAE+EL YK DHVS S+Y+
Sbjct: 189 YRTLDHDYEIRQLRIFQKMVEKGLIYRHYRPVHYSPSSHSALAEAELTYKDDHVSHSVYV 248
Query: 182 KI-------KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
K++ V +L L+WTTTPW+L AN IA +P L Y+V GA
Sbjct: 249 SYSLDLKAEKMSTVLREILAQEPRADLLVWTTTPWTLTANMGIAVHPELTYTVLRRNGAP 308
Query: 235 ----VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDL-----KLLPA 285
+IVAK + SL IEV+ D G L D Y+ P+ + K++PA
Sbjct: 309 GNGVLIVAKDRILSLTEVVGP-IEVIADIKGSDLVDAPYL-PLFSPSGAIVPIPYKIIPA 366
Query: 286 GFVSSSKGTGLVHCAPAHGQDDF-------LLALAEKIPVLNLITNQGKYS--------P 330
V+S GTGLVHCAPAHG +D+ L+ ++ + GK++
Sbjct: 367 SHVTSDSGTGLVHCAPAHGGEDYQAFRTLGLINSHNPNSIICHVDEAGKFTHKVADVVGE 426
Query: 331 DAGPGLEGLNILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFID 388
+A + G +L DG ++ L+E ++ + +H YPYDW+T +P+I+ A+ QWF +
Sbjct: 427 EAALTVIGQEVLKDGGKAIVKLLEHTGKLVKVQRIKHRYPYDWKTNEPIIVIATSQWFAN 486
Query: 389 TERIKPEAL 397
+ IK +AL
Sbjct: 487 LDNIKDDAL 495
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 4/144 (2%)
Query: 1125 GLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 1182
G +L +G ++ L+E ++ + +H YPYDW+T +P+I+ A+ QWF + + IK +
Sbjct: 434 GQEVLKDGGKAIVKLLEHTGKLVKVQRIKHRYPYDWKTNEPIIVIATSQWFANLDNIKDD 493
Query: 1183 ALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIK 1240
AL L+ V F P +++ L + R WCISRQRVWGVPIP Y+ T ++N ++
Sbjct: 494 ALNALKDVIFFPPASRNRLESFVRSRSEWCISRQRVWGVPIPALYNAHTNQPVLNTESLD 553
Query: 1241 HFCTLIDEHGPDFWWSLPVEQLLN 1264
H +++E G +WW PVE L
Sbjct: 554 HILKVLEEKGVAYWWDGPVEDFLT 577
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 1008 LAEEVYS--HLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIF 1065
+A E Y+ + P + ++F + + Y I K LY DS++ R + + L NI
Sbjct: 779 VAHEGYASYNFPKVINSLTNFANLTLSSLYF-DITKDCLYADSVHSMKRRAVVTVLENIL 837
Query: 1066 HVLLRTVAPIMPHLAEEVYSH 1086
+ ++ +AP++PHLAEE++ H
Sbjct: 838 NSIISVMAPVLPHLAEEIHFH 858
>gi|239616422|ref|YP_002939744.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
gi|259511506|sp|C5CHA1.1|SYI_KOSOT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|239505253|gb|ACR78740.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 921
Score = 349 bits (895), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 215/628 (34%), Positives = 327/628 (52%), Gaps = 61/628 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH S SIY+K + P +IWTTTPW+LPAN IA N
Sbjct: 192 TALAEAEVEYH-DHKSYSIYVKFQDKNKPNRFF--------VIWTTTPWTLPANVAIALN 242
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P +Y VK I+A+ L+E +K +++ G + HP RD
Sbjct: 243 PNFDYCEVKVKDEIWILAEGLLEQAMKAMGIESYEIISTKKGSEFEGEVAQHPFM--NRD 300
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ A +V+ GTG VH AP HG++D+ L ++PV++ + +QG ++ +AG GL
Sbjct: 301 SVIVMADYVALDAGTGCVHTAPGHGEEDYGTGLRYRLPVISPVNDQGIFTKEAGK-YAGL 359
Query: 597 NILGDGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTER--IKPEA 653
+ V L + L E +HSYP+ WR K PVI +A++QWFID ++ ++ +A
Sbjct: 360 FVFDANPIIVEDLRKSGHLVGEGKIEHSYPHCWRCKNPVIFRATEQWFIDVDKNDLRQKA 419
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L+ +E+ + P + + + RP WCISRQR WG+PIP F D I++ I H
Sbjct: 420 LSEIEKTEWHPSWGQNRITAMVQDRPDWCISRQRSWGIPIPAFRCQDCGESILDGKVIDH 479
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLK-- 764
F +++E G D W+ S LL + N+ K DILD+W DSG S+ V+K
Sbjct: 480 FAGIVEEKGTDVWFEWSESDLLPEGYTCPKCGSKNLKKQEDILDVWVDSGSSFEAVVKVM 539
Query: 765 DK---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
D+ PA VY+EG DQ GWF SSLL SV + APF++V HGF+ DE+G KMSKS+GN
Sbjct: 540 DELRFPADVYIEGSDQHRGWFQSSLLLSVGTEGVAPFKSVITHGFINDEQGRKMSKSLGN 599
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
+ +I YG ++LR WVA+ ++ +
Sbjct: 600 AVDPQEINN-----------------------------KYGAEILRLWVASSNYQE-DIR 629
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYV---DVYMLKRLCEFQNTMD 938
I NI+ ++ +KIR++LRYLLG L ++S + D + + +L + +
Sbjct: 630 ISMNIIQQQIENYKKIRNTLRYLLGNLSDYSPQDSVPYEELLELDKWAIMKLHKLIRDVT 689
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +++ + + +L F++ ++SAFY ++KDRLY + R S L I L
Sbjct: 690 RYYDRYEFYKVFQSILKFIITDMSAFYLDIIKDRLYVEGKTSPERRSAQTVLFEILVALN 749
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFSSF 1026
+ +API+ +EEVY+HLP + +
Sbjct: 750 KMLAPILTFTSEEVYAHLPEAARNYKTI 777
Score = 271 bits (692), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 220/391 (56%), Gaps = 18/391 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY + ++ G P F+LHDGPPYANG H+G A+NKILKD ++ +QG Y+PGW
Sbjct: 35 DLYKYVQKNREGAPLFVLHDGPPYANGNIHVGTALNKILKDFIIKYKTMQGYNAPYIPGW 94
Query: 66 DCHGLPIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE + + K K LS IRKK + +A + + Q+ +F+ GV DWE N Y
Sbjct: 95 DTHGLPIEHRVASELGEKAKELSKSTIRKKCRKYAEKYVKIQREQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
TFD +Y + L L K +YR LKP+YW S TALAE+E+EY DH S SIY+K
Sbjct: 154 LTFDPKYEASVLKVLSKLVKSGNVYRTLKPIYWCTSCETALAEAEVEYH-DHKSYSIYVK 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ P +IWTTTPW+LPAN IA NP +Y VK I+A+ L+
Sbjct: 213 FQDKNKPNRFF--------VIWTTTPWTLPANVAIALNPNFDYCEVKVKDEIWILAEGLL 264
Query: 243 E-SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E ++K E++ G + HP RD ++ A +V+ GTG VH AP
Sbjct: 265 EQAMKAMGIESYEIISTKKGSEFEGEVAQHPFM--NRDSVIVMADYVALDAGTGCVHTAP 322
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG++D+ L ++PV++ + +QG ++ +AG GL + V L + L E
Sbjct: 323 GHGEEDYGTGLRYRLPVISPVNDQGIFTKEAGK-YAGLFVFDANPIIVEDLRKSGHLVGE 381
Query: 362 -NYQHSYPYDWRTKKPVILKASQQWFIDTER 391
+HSYP+ WR K PVI +A++QWFID ++
Sbjct: 382 GKIEHSYPHCWRCKNPVIFRATEQWFIDVDK 412
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 1167
+ +QG ++ +AG GL + V L + L E +HSYP+ WR K PVI +
Sbjct: 343 VNDQGIFTKEAGK-YAGLFVFDANPIIVEDLRKSGHLVGEGKIEHSYPHCWRCKNPVIFR 401
Query: 1168 ASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWFID ++ ++ +AL+ +E + P + + + RP WCISRQR WG+PIP
Sbjct: 402 ATEQWFIDVDKNDLRQKALSEIEKTEWHPSWGQNRITAMVQDRPDWCISRQRSWGIPIPA 461
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F D I++ I HF +++E G D W+ LL
Sbjct: 462 FRCQDCGESILDGKVIDHFAGIVEEKGTDVWFEWSESDLL 501
>gi|404494112|ref|YP_006718218.1| isoleucyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|84029525|sp|Q3A1R3.1|SYI_PELCD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|77546132|gb|ABA89694.1| isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 927
Score = 349 bits (895), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 216/644 (33%), Positives = 328/644 (50%), Gaps = 59/644 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN-QVPAHLLE-GATDLHALIWTTTPWSLPANQFIA 475
TALAE+E+EY DH S SIY+K + ++PA L + L +IWTTTPW++PAN +
Sbjct: 192 TALAEAEVEY-ADHKSPSIYVKFPFDGELPAELNDLAGRKLSFVIWTTTPWTIPANLAVC 250
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
NP L Y+V +++A+ LV + + V+ F + T HP
Sbjct: 251 LNPNLPYAVVETGDELLVMAEGLVSGVMQELGLENYRVLKTFEAPIFERKTCRHPFY--D 308
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R L+ V+ GTG VH AP HGQDD+++ LA + V N + N G+Y D
Sbjct: 309 RPSLLILGDHVTLEAGTGCVHTAPGHGQDDYVVGLAYGLDVYNPVDNYGRYYEDV-EFFG 367
Query: 595 GLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTER--IKP 651
G+ I L E L E+ HSYP+ WR KKP+I +A++QWFI E ++
Sbjct: 368 GMKINQANGAVNAKLTEVGALLKESEVSHSYPHCWRCKKPIIFRATEQWFISMEANGLRE 427
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANI 709
+AL + +VN+VP + + + + RP WCISRQR WGVPI +FY + + +
Sbjct: 428 KALGHINDVNWVPRWGRDRIYNMVENRPDWCISRQRSWGVPITIFYCAKCGEALEDSKVM 487
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLK 764
+ L +E G D W+ ++L+ + TK DILD+WFDSG+S + VL
Sbjct: 488 DYVADLFEEGGSDLWFDKPAKELMPAGTTCPGCGHDEFTKETDILDVWFDSGVSHAAVLD 547
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSLL SV + P+++V HGFVVD KG KMSKSV
Sbjct: 548 NRDYLSWPADLYLEGSDQHRGWFHSSLLASVGTRELTPYKSVLTHGFVVDGKGKKMSKSV 607
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV++ ++ + YG ++LR WVAA +D
Sbjct: 608 GNVVAPEEVIK-----------------------------KYGAEILRLWVAAQDYRD-D 637
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQN 935
+ I IL D ++IR++ RY+LG L S ++ +D + L +L +
Sbjct: 638 IRISNEILQRLSDAYRRIRNTARYILGNLSGFDPSRDMVADDQLLELDRWALAKLEDLAG 697
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ Y ++++ + NF E+S+FY ++KDRLY + AR S ++ I
Sbjct: 698 RVEKAYEDYEFHIIYHAVHNFCSVEMSSFYLDVLKDRLYVSGTDSIARRSAQTAMYRILD 757
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSI 1039
+ R +AP++ AEE+++ +P G S H ++Q+ S
Sbjct: 758 CITRLIAPVLSFTAEEIWAFMP---GERSESVHLGEFVQFPTSF 798
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/406 (38%), Positives = 220/406 (54%), Gaps = 15/406 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY EA +P F LHDGPPYANG HIGHA+NKILKDI L+S ++G YVPGWD
Sbjct: 36 LYEKMEEAGRTRPNFTLHDGPPYANGHIHIGHALNKILKDIVLKSRRMKGFYAPYVPGWD 95
Query: 67 CHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIEL K + K + ++ ++IRK+ + +A + + Q EFE GV+ +W+ Y
Sbjct: 96 CHGLPIELMVDKKLGKKKRDMTKVEIRKECRVYADQWVKIQSEEFERLGVMGEWDRP-YL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T Y + ++ +++ KP++W S TALAE+E+EY DH S SIY+K
Sbjct: 155 TMTHHYEAVTARELARFVEKGGLFKGKKPIHWCSSCVTALAEAEVEY-ADHKSPSIYVKF 213
Query: 184 KLN-QVPAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ ++PA L + L +IWTTTPW++PAN + NP L Y+V +++A+ L
Sbjct: 214 PFDGELPAELNDLAGRKLSFVIWTTTPWTIPANLAVCLNPNLPYAVVETGDELLVMAEGL 273
Query: 242 VESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
V + + V+ F + T HP R L+ V+ GTG VH A
Sbjct: 274 VSGVMQELGLENYRVLKTFEAPIFERKTCRHPFY--DRPSLLILGDHVTLEAGTGCVHTA 331
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HGQDD+++ LA + V N + N G+Y D G+ I L E L
Sbjct: 332 PGHGQDDYVVGLAYGLDVYNPVDNYGRYYEDV-EFFGGMKINQANGAVNAKLTEVGALLK 390
Query: 361 EN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
E+ HSYP+ WR KKP+I +A++QWFI E L K +G+I
Sbjct: 391 ESEVSHSYPHCWRCKKPIIFRATEQWFISME---ANGLREKALGHI 433
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + N G+Y D G+ I L E L E+ HSYP+ WR KKP+I
Sbjct: 351 NPVDNYGRYYEDV-EFFGGMKINQANGAVNAKLTEVGALLKESEVSHSYPHCWRCKKPII 409
Query: 1166 LKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+A++QWFI E ++ +AL + VN+VP + + + + RP WCISRQR WGVPI
Sbjct: 410 FRATEQWFISMEANGLREKALGHINDVNWVPRWGRDRIYNMVENRPDWCISRQRSWGVPI 469
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY + + + + L +E G D W+ P ++L+
Sbjct: 470 TIFYCAKCGEALEDSKVMDYVADLFEEGGSDLWFDKPAKELM 511
>gi|78043727|ref|YP_359392.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
gi|123743221|sp|Q3AEP2.1|SYI_CARHZ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|77995842|gb|ABB14741.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
Length = 925
Score = 349 bits (895), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 323/624 (51%), Gaps = 61/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY + S SIY++ K+ + + E D + +IWTTTPW+LPAN IA +
Sbjct: 192 TALAEAEIEYA-EKKSPSIYVRFKVVEGKGKVPE---DAYLVIWTTTPWTLPANVAIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P Y++ + + +VA+ LV+ + ++V F G+ L + HP +R+
Sbjct: 248 PEFTYALVKTEKGDYVVAEGLVQQFFEATKLTGEIVARFKGEELLGVVTRHPFI--ERES 305
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ A +V+ GTGLVH AP HG +DF +PVL+ + +QG ++ AG G+
Sbjct: 306 PVVLADYVTLESGTGLVHTAPGHGTEDFETGKKYNLPVLSPVNHQGVFTEGAGK-YAGMK 364
Query: 598 ILGDGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
I DG + +E D+L +HSYP+ WR K PVI +A++QWF + + +AL
Sbjct: 365 I-DDGNKAITQDLEASGDLLAMSFIKHSYPHCWRCKNPVIFRATEQWFASIDGFREQALK 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTIIVNEANIKHF 712
+E+V ++P K + + + R WCISRQR WGVPIP+FY G II +E+ IK
Sbjct: 424 EIEKVEWIPAWGKDRIYNMVRDRGDWCISRQRTWGVPIPIFYCEACGKEIITDES-IKAV 482
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L G D WW ++L K DI+D+WFDSG S + VL+
Sbjct: 483 SDLFRVEGSDAWWKYEAGEILPDGFRCPHCGGVKFRKETDIMDVWFDSGSSHAAVLEQPE 542
Query: 767 -------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
PA +Y+EG DQ GWF SSL T+VA + AP++ V HGF+VDEKG KMSKS+
Sbjct: 543 YWPDLRWPADLYLEGSDQHRGWFNSSLSTAVATRGMAPYKAVLTHGFLVDEKGRKMSKSL 602
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ K + G D+LR WVA+ A
Sbjct: 603 GNVVDP-----------------------------LKVIKELGADILRLWVAS-ADYRSD 632
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
+ I NIL + + +KIR+++R+LLG L+++ + +D + L +L
Sbjct: 633 LAISNNILKQTAEGYRKIRNTIRFLLGNLYDYDHEKHRVPYERLLEIDRWALAKLHRLIA 692
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++++ + NF ++SA Y ++KDRLY + + E R S L+ I
Sbjct: 693 RVVRAYRDYEFHVVFHAVHNFCTVDMSAIYLDIIKDRLYVELPDSEKRRSAQTVLYEILD 752
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSR 1019
LLR + PI+ EE Y H P++
Sbjct: 753 SLLRLLTPILAFTTEEAYRHFPAK 776
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 14/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY ++ G+P+FILHDGPPYANG H+GH +NK+LKD+ ++ + G YVPGW
Sbjct: 35 DLYRKVQQKNEGRPKFILHDGPPYANGDIHMGHVLNKVLKDMIVKFKSMDGYDAPYVPGW 94
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +AI K +SPL+ R K + +A + QK +F+ GV DWE N Y
Sbjct: 95 DTHGLPIEQRAIKDLGINRKEISPLEFRAKCREYAEKYARIQKEQFKRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T Y Q+ F + K+ YIY+ LKPVYW P TALAE+E+EY + S SIY++
Sbjct: 154 LTLMPHYEAKQIEIFGEMAKKGYIYKGLKPVYWCPVCETALAEAEIEYA-EKKSPSIYVR 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K+ + + E D + +IWTTTPW+LPAN IA +P Y++ + + +VA+ LV
Sbjct: 213 FKVVEGKGKVPE---DAYLVIWTTTPWTLPANVAIAVHPEFTYALVKTEKGDYVVAEGLV 269
Query: 243 ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
+ + E+V F G+ L + HP +R+ ++ A +V+ GTGLVH AP
Sbjct: 270 QQFFEATKLTGEIVARFKGEELLGVVTRHPFI--ERESPVVLADYVTLESGTGLVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLWT 360
HG +DF +PVL+ + +QG ++ AG G+ I DG + +E D+L
Sbjct: 328 HGTEDFETGKKYNLPVLSPVNHQGVFTEGAGK-YAGMKI-DDGNKAITQDLEASGDLLAM 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+HSYP+ WR K PVI +A++QWF + + +AL
Sbjct: 386 SFIKHSYPHCWRCKNPVIFRATEQWFASIDGFREQAL 422
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKP 1163
L+ + +QG ++ AG G+ I +G + +E D+L +HSYP+ WR K P
Sbjct: 344 LSPVNHQGVFTEGAGK-YAGMKI-DDGNKAITQDLEASGDLLAMSFIKHSYPHCWRCKNP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A++QWF + + +AL +E V ++P K + + + R WCISRQR WGVPI
Sbjct: 402 VIFRATEQWFASIDGFREQALKEIEKVEWIPAWGKDRIYNMVRDRGDWCISRQRTWGVPI 461
Query: 1224 PVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY G II +E+ IK L G D WW ++L
Sbjct: 462 PIFYCEACGKEIITDES-IKAVSDLFRVEGSDAWWKYEAGEIL 503
>gi|410594164|ref|YP_006950891.1| isoleucine--tRNA ligase [Streptococcus agalactiae SA20-06]
gi|410517803|gb|AFV71947.1| Isoleucine--tRNA ligase [Streptococcus agalactiae SA20-06]
Length = 930
Score = 349 bits (895), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 332/643 (51%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGIL---DTDTYIVVWTTTPFTVTASRGLTIG 246
Query: 478 PALEYSVASVKGA--NVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +EY V G+ ++A+ LV++L F + ++V G+ L I HP + E
Sbjct: 247 PDMEYVVVVPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHSGKELNHIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + ++G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVIVTVDSRGLMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V LV+ + L +E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 366 G-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+ NF PE KK L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L E+G WW + LL + N K DI+D+WFDSG SW+ V+
Sbjct: 481 -DHVADLFAEYGSIVWWQRDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVM 539
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARENHSYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+ + +G ++LR WV + S +
Sbjct: 600 LGNTILPSDVEK-----------------------------QFGAEILRLWVTSVDSSN- 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V I +IL + + +KIR++LR+L+ + + +++ +D YM + +
Sbjct: 630 DVRISMDILKQTSETYRKIRNTLRFLIANTSDFNPKQDAVAYENLGTIDRYMTIKFNQVV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+T++ Y + + + ++NFV +LSAFY KD +Y ++ N R ++I
Sbjct: 690 DTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
L + + PI+PH AEE++S+L + F V +SG
Sbjct: 750 VKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSG 792
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 230/397 (57%), Gaps = 21/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ALN GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQALNEGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K + + + +++AL ++ Q+ +F+ GV ADWE N Y T
Sbjct: 99 LPIEQVLAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y K+
Sbjct: 158 DYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYANKVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--NVIVAKCLVESL 245
L TD + ++WTTTP+++ A++ + P +EY V G+ ++A+ LV+SL
Sbjct: 217 GKGIL---DTDTYIVVWTTTPFTVTASRGLTIGPDMEYVVVVPVGSERKYLLAEVLVDSL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F + E+V G+ L I HP + E +L +L V++ GTG+VH AP G
Sbjct: 274 AAKFGWENFEIVTHHSGKELNHIVTEHPWDTEVEELVIL-GDHVTTDSGTGIVHTAPGFG 332
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD----VLWT 360
+DD+ + +A + V+ + ++G +AGP E G D+V LV+ +L +
Sbjct: 333 EDDYNVGIANGLDVIVTVDSRGLMMENAGPDFE-----GQFYDKVTPLVKEKLGDLLLAS 387
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 388 EVINHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ ++G +AGP EG + D+V LV+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDSRGLMMENAGPDFEG-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E NF PE KK L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L E+G WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVADLFAEYGSIVWWQRDAKDLL 504
>gi|116334043|ref|YP_795570.1| isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
gi|122269273|sp|Q03QI3.1|SYI_LACBA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|116099390|gb|ABJ64539.1| Isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
Length = 937
Score = 348 bits (894), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 326/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+A+AE+E+EY D S S + ++ L TD + ++WTTTPW++P ++ I +
Sbjct: 191 SAMAEAEVEYH-DVTSPSAFYGEQVVDGKGVL---DTDTYLVVWTTTPWTIPGSEGITID 246
Query: 478 PALEYSVASVKGAN-----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+EY+V VK AN V+ A + +N + D+ V+ GQ L ++T HP
Sbjct: 247 AGIEYAV--VKPANDDRKFVLAADLVDQNAEMFGWEDVQVIKTVMGQDLDNVTAQHPFIA 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ R L ++ FV++ GTGLVH AP G+DDF + +PVL + ++G + +AG
Sbjct: 305 D-RKLVVMLGDFVTTESGTGLVHTAPGLGEDDFNVGALYHLPVLVPVDDKGYMTAEAGAD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G+ + + L + L Y+HSYP+DWRTKKPVI +A+ QWF ++I+
Sbjct: 364 FAGVFYEDANQIALDKLKAANALLKYMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIRD 423
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E LA L++V F P+ ++ L + I R W ISRQRVWGVP+P+FY DG+ II E +
Sbjct: 424 EILAQLKDVKFQPDWGQRRLANMIKDRGDWVISRQRVWGVPLPIFYGEDGEAIITPE-TV 482
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L E+G + W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 483 DHVADLFAEYGSNIWFKREAKDLLPDGFTSEHSPNGEFTKETDIMDVWFDSGTSHQGVLA 542
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSVA AP++ V GF +D+ G KMSKS+
Sbjct: 543 ERDYLDFPADLYLEGSDQYRGWFNSSLITSVAATGKAPYKQVVSQGFTLDKDGHKMSKSL 602
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ +I + G D++R WV + S
Sbjct: 603 GNTIAPDEI-----------------------------ISKMGADIVRLWVTSVDSS-AD 632
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + D +K+R+++RYLL + T +I+ + VD +ML +L EF
Sbjct: 633 VRVSTEAFVKISDSYKKLRNTMRYLLANTSDFDPQTDAIAVDDLQPVDRHMLYQLNEFAK 692
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ Y + + + L+NFVV++LSAFY KD LY ++ + R S + I
Sbjct: 693 SVRAHYDHYDFLNIYKELINFVVSDLSAFYLDFAKDILYIEAADSPVRRSMQTVFYQIAV 752
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH AEE++ L
Sbjct: 753 SLTKLITPILPHTAEEIWDFL 773
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 230/402 (57%), Gaps = 16/402 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y +++ GKP FILHDGPPYANG H+GHA+NKI KDI +R + G R YVPG
Sbjct: 34 NKMYEARQKLNEGKPTFILHDGPPYANGPIHMGHALNKISKDIIVRYKSMSGFRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K +S + R + +AL+ ++ Q+ F+ GV A+W+ N Y
Sbjct: 94 WDTHGLPIEQQLTKAGYDRKKMSTAEFRDLCREYALKQVDQQREGFKRLGVSAEWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ ++ F + K+ IY+ KPVYWS SS +A+AE+E+EY D S S +
Sbjct: 153 LTLKPEFEAAEVRVFGEMAKRGLIYKGKKPVYWSWSSESAMAEAEVEYH-DVTSPSAFYG 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTPW++P ++ I + +EY+V VK AN ++A
Sbjct: 212 EQVVDGKGVL---DTDTYLVVWTTTPWTIPGSEGITIDAGIEYAV--VKPANDDRKFVLA 266
Query: 239 KCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
LV+ F D++V+ GQ L ++T HP + R L ++ FV++ GTGLV
Sbjct: 267 ADLVDQNAEMFGWEDVQVIKTVMGQDLDNVTAQHPFIAD-RKLVVMLGDFVTTESGTGLV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H AP G+DDF + +PVL + ++G + +AG G+ + + L +
Sbjct: 326 HTAPGLGEDDFNVGALYHLPVLVPVDDKGYMTAEAGADFAGVFYEDANQIALDKLKAANA 385
Query: 358 LWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
L Y+HSYP+DWRTKKPVI +A+ QWF ++I+ E L
Sbjct: 386 LLKYMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIRDEILA 427
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
Y+HSYP+DWRTKKPVI +A+ QWF ++I+ E LA L+ V F P+ ++ L + I R
Sbjct: 392 YEHSYPFDWRTKKPVIFRATPQWFASVDKIRDEILAQLKDVKFQPDWGQRRLANMIKDRG 451
Query: 1210 YWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQRVWGVP+P+FY DG+ II E + H L E+G + W+ + LL
Sbjct: 452 DWVISRQRVWGVPLPIFYGEDGEAIITPE-TVDHVADLFAEYGSNIWFKREAKDLL 506
>gi|229918560|ref|YP_002887206.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
gi|229469989|gb|ACQ71761.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
Length = 908
Score = 348 bits (894), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 220/619 (35%), Positives = 321/619 (51%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S +IY+ ++ L +D H +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYY-DKKSPAIYVAFRVVDGKDTL---TSDDHFVIWTTTPWTIPANLGIAVS 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
L Y+ +G IVA+ LVE + TD V + G+ + +T HP+
Sbjct: 247 DELTYTRIEHEGKGYIVAETLVEEVTAALGWTDYTVSGSWNGRDFEYMTAQHPLYDRT-- 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L+ G ++ TGLVH AP HG+DD+ + A + VL + ++G Y D PG EGL
Sbjct: 305 -SLVILGDHVTADATGLVHTAPGHGEDDYRVGQAYGLDVLCPVDDRG-YMTDEAPGFEGL 362
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K + L E L + +HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 FYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFREDMLR 422
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EEVN+VPE L + + R W ISRQR WGVPIP+FY DG II NE I H
Sbjct: 423 EIEEVNWVPEWGMTRLYNMVRDRGDWVISRQRAWGVPIPIFYAEDGTEIITNE-TIDHIA 481
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + + N K DI+D+WFDSG S + VL+++
Sbjct: 482 NLFREHGSNVWYEREAKDLLPAGFTHPNSPNGEFRKELDIMDVWFDSGSSHAGVLEEREN 541
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA AP+RNV HGFV+D G KMSKS+GN I
Sbjct: 542 LRRPADLYLEGSDQYRGWFNSSLSTAVATTGKAPYRNVLSHGFVLDGDGRKMSKSLGNTI 601
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ +D+ + YG +++R WVA+ V
Sbjct: 602 APNDLVK-----------------------------QYGAEIVRLWVAS-VDYQSDVRAS 631
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR---YVDVYMLKRLCEFQNTMDTL 940
+ + +K+R+++R+LLG L+ S D +M +L + Q +
Sbjct: 632 HDNFKQVSEVYRKMRNTIRFLLGNLNGFEPSMRVAFDDMPEADRFMATKLKQLQTKVVKA 691
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y EF + ++ NF VNELS+FY KD LY + + R + +++ +L +
Sbjct: 692 YDEFDFMAVYHLVHNFCVNELSSFYLDFTKDILYIEREDDLRRRAVQTVMYDAVVLLTKL 751
Query: 1001 VAPIMPHLAEEVYSHLPSR 1019
+API+PH A+E + +P +
Sbjct: 752 LAPILPHTADEAWKEVPGK 770
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 234/399 (58%), Gaps = 19/399 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+ +E GKP++ILHDGPPYANG H+GHA+NK+LKDI +R + G + +PGW
Sbjct: 35 DLYNKVQEKNAGKPQYILHDGPPYANGDIHMGHAMNKVLKDIIVRFKGMNGYQSPMIPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L+ K ++ + R+K +A+E +N+Q+ +F+ G+LAD+E N Y
Sbjct: 95 DTHGLPIENALQKAGVNRKEMTVAEFREKCAEYAMEQVNSQREQFKRLGLLADFE-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F ++ ++ YIY+ KPVYWSPSS +ALAE+E+EY D S +IY+
Sbjct: 154 TLLPEYEAAQIRLFGSMAEKGYIYKGKKPVYWSPSSESALAEAEIEYY-DKKSPAIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
++ L +D H +IWTTTPW++PAN IA + L Y+ +G IVA+ LVE
Sbjct: 213 RVVDGKDTL---TSDDHFVIWTTTPWTIPANLGIAVSDELTYTRIEHEGKGYIVAETLVE 269
Query: 244 ----SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
+L W TD V + G+ + +T HP+ L+ G ++ TGLVH
Sbjct: 270 EVTAALGW---TDYTVSGSWNGRDFEYMTAQHPLYDRT---SLVILGDHVTADATGLVHT 323
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DD+ + A + VL + ++G Y D PG EGL K + L E L
Sbjct: 324 APGHGEDDYRVGQAYGLDVLCPVDDRG-YMTDEAPGFEGLFYEDANKQIGMKLEENGYLL 382
Query: 360 TENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 383 NLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFREDML 421
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 1115 YSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWF 1173
Y D PG EGL K + L E L + +HSYP+DWRTKKPVI +A+ QWF
Sbjct: 351 YMTDEAPGFEGLFYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVIFRATPQWF 410
Query: 1174 IDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDT 1231
+ + + L +E VN+VPE L + + R W ISRQR WGVPIP+FY DG
Sbjct: 411 ASIKDFREDMLREIEEVNWVPEWGMTRLYNMVRDRGDWVISRQRAWGVPIPIFYAEDGTE 470
Query: 1232 IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
II NE I H L EHG + W+ + LL
Sbjct: 471 IITNE-TIDHIANLFREHGSNVWYEREAKDLL 501
>gi|421531595|ref|ZP_15977976.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae STIR-CD-17]
gi|403643269|gb|EJZ04054.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae STIR-CD-17]
Length = 930
Score = 348 bits (894), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 332/643 (51%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGIL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGA--NVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +EY V G+ ++A+ LV++L F + ++V G+ L I HP + E
Sbjct: 247 PDMEYVVVVPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHSGKELNHIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + ++G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVIVTVDSRGLMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V LV+ + L +E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 366 G-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+ NF PE KK L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L E+G WW + LL + N K DI+D+WFDSG SW+ V+
Sbjct: 481 -DHVADLFAEYGSIVWWQRDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVM 539
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARENHSYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+ + +G ++LR WV + S +
Sbjct: 600 LGNTILPSDVEK-----------------------------QFGAEILRLWVTSVDSSN- 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V I +IL + + +KIR++LR+L+ + + +++ +D YM + +
Sbjct: 630 DVRISMDILKQTSETYRKIRNTLRFLIANTSDFNPKQDAVAYENLGTIDRYMTIKFNQVV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+T++ Y + + + ++NFV +LSAFY KD +Y ++ N R ++I
Sbjct: 690 DTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
L + + PI+PH AEE++S+L + F V +SG
Sbjct: 750 VKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSG 792
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 230/397 (57%), Gaps = 21/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ALN GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQALNEGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K + + + +++AL ++ Q+ +F+ GV ADWE N Y T
Sbjct: 99 LPIEQVLAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y K+
Sbjct: 158 DYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYANKVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--NVIVAKCLVESL 245
L TD + ++WTTTP+++ A++ + P +EY V G+ ++A+ LV+SL
Sbjct: 217 GKGIL---DTDTYIVVWTTTPFTVTASRGLTVGPDMEYVVVVPVGSERKYLLAEVLVDSL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F + E+V G+ L I HP + E +L +L V++ GTG+VH AP G
Sbjct: 274 AAKFGWENFEIVTHHSGKELNHIVTEHPWDTEVEELVIL-GDHVTTDSGTGIVHTAPGFG 332
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD----VLWT 360
+DD+ + +A + V+ + ++G +AGP E G D+V LV+ +L +
Sbjct: 333 EDDYNVGIANGLDVIVTVDSRGLMMENAGPDFE-----GQFYDKVTPLVKEKLGDLLLAS 387
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 388 EVINHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ ++G +AGP EG + D+V LV+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDSRGLMMENAGPDFEG-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E NF PE KK L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L E+G WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVADLFAEYGSIVWWQRDAKDLL 504
>gi|134298586|ref|YP_001112082.1| isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|172044256|sp|A4J2F4.1|SYI_DESRM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|134051286|gb|ABO49257.1| Isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 931
Score = 348 bits (894), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 207/622 (33%), Positives = 318/622 (51%), Gaps = 58/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY D S SIY+K + L + A +IWTTTPW+LPAN I+ +
Sbjct: 192 TALAEAEVEY-ADKTSPSIYVKFPVKDGKGVLPQDAA---VVIWTTTPWTLPANVAISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P EY +A+V+ ++VAK L+E+ K + +++ + G+ L+ + HP E+
Sbjct: 248 PEFEYVLAAVQNQKIVVAKELLESFKQAVGAEEAEILATYQGEQLERVVCQHPFIDERES 307
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L +L V+ GTG VH AP HG++DF++ ++PVL I N+G+++ + G +G
Sbjct: 308 LVIL-GEHVTLDAGTGAVHTAPGHGEEDFMVGKKYELPVLAPIDNRGRFTSEGGK-FQGQ 365
Query: 597 NILGDGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
I+ K + L E D L + +H YP+ WR K+P+ +A++QWF + + EAL
Sbjct: 366 FIMDANKTIIEELKERDALMGHVSIKHQYPHCWRCKQPIFFRATEQWFASVDGFRQEALQ 425
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+ V +VP + + + + R WC+SRQR WGVPIP+FY D I+ E I H
Sbjct: 426 AIRNVKWVPSWGEDRIYNMVEGRGDWCVSRQRTWGVPIPIFYCNDCGKEIITEETISHIE 485
Query: 714 TLIDEHGPDFWWSLSVEQLLNTS------DVNSNVTKSNDILDIWFDSGISWSHVL---- 763
L EHG D W++ +L+ S + K D +D+WFDSG S VL
Sbjct: 486 KLFREHGSDIWFAKEANELVPASLTCPHCGKGKDFRKETDTMDVWFDSGSSHLAVLNQPE 545
Query: 764 ----KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ +PA +Y+EG DQ GWF SSL TSVA+ P++ V HGF VDEKG KMSKS+
Sbjct: 546 LWPEQQRPADLYLEGSDQHRGWFNSSLSTSVAVTGKPPYKTVLTHGFTVDEKGRKMSKSL 605
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+ I G D+LR WV++ A
Sbjct: 606 GNVVDPLKICS-----------------------------QMGADILRLWVSS-ADYRAD 635
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQN 935
+ + +NIL + +KIR++ R+LLG L++ ++ +D L L +
Sbjct: 636 LALSQNILKQMTESYRKIRNTARFLLGNLYDFDPVKDKVAYDKLPELDRVALMELHKLIK 695
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +++ + N+ V +LSAFY ++KDRLY R + L+
Sbjct: 696 QVLAAYENYEFHIVYHAVHNYCVVDLSAFYLDIIKDRLYTAVPGSLERRAAQTVLYEALD 755
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
L+R + P++ EE+Y ++P
Sbjct: 756 ALVRLLTPVLAFTTEEIYKYMP 777
Score = 296 bits (758), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 235/397 (59%), Gaps = 12/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY +E GK +FILHDGPPYANG H+GH +NK+LKDI ++ + G YVPGW
Sbjct: 35 DLYKKVQEKNKGKTKFILHDGPPYANGHIHLGHTLNKVLKDIIVKYRSMSGYDAPYVPGW 94
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +AI ++P++ R K K++AL+ NTQ EF+ GV DWE N Y
Sbjct: 95 DTHGLPIEQQAIKQLGINRHQVNPVEFRAKCKDYALKWANTQSEEFQRLGVRGDWE-NPY 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
+T +Y Q+ F + K+ YIY+ LKPVYW S TALAE+E+EY D S SIY+K
Sbjct: 154 YTLLPQYEATQIRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEVEY-ADKTSPSIYVK 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L + D +IWTTTPW+LPAN I+ +P EY +A+V+ ++VAK L+
Sbjct: 213 FPVKDGKGVLPQ---DAAVVIWTTTPWTLPANVAISVHPEFEYVLAAVQNQKIVVAKELL 269
Query: 243 ESLKWTFQT-DIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
ES K + E++ + G+ L+ + HP E+ L +L V+ GTG VH AP
Sbjct: 270 ESFKQAVGAEEAEILATYQGEQLERVVCQHPFIDERESLVIL-GEHVTLDAGTGAVHTAP 328
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG++DF++ ++PVL I N+G+++ + G +G I+ K + L E D L
Sbjct: 329 GHGEEDFMVGKKYELPVLAPIDNRGRFTSEGGK-FQGQFIMDANKTIIEELKERDALMGH 387
Query: 362 -NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +H YP+ WR K+P+ +A++QWF + + EAL
Sbjct: 388 VSIKHQYPHCWRCKQPIFFRATEQWFASVDGFRQEAL 424
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 1167
I N+G+++ + G +G I+ K + L E D L + +H YP+ WR K+P+ +
Sbjct: 349 IDNRGRFTSEGGK-FQGQFIMDANKTIIEELKERDALMGHVSIKHQYPHCWRCKQPIFFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF + + EAL + V +VP + + + + R WC+SRQR WGVPIP+FY
Sbjct: 408 ATEQWFASVDGFRQEALQAIRNVKWVPSWGEDRIYNMVEGRGDWCVSRQRTWGVPIPIFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
D I+ E I H L EHG D W++ +L+ S
Sbjct: 468 CNDCGKEIITEETISHIEKLFREHGSDIWFAKEANELVPAS 508
>gi|418282941|ref|ZP_12895698.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
gi|365168538|gb|EHM59876.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
Length = 917
Score = 348 bits (894), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 324/622 (52%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
RD ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRDSLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL ++ N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHSGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I +IL + D +KIR++LR++LG +++ + T S+ VD Y+L RL EF
Sbjct: 631 VRISDDILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP RD ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRDSLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|22536664|ref|NP_687515.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
gi|76788204|ref|YP_329219.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae A909]
gi|77405574|ref|ZP_00782664.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae H36B]
gi|406709018|ref|YP_006763744.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae GD201008-001]
gi|424049916|ref|ZP_17787467.1| isoleucyl-tRNA ligase [Streptococcus agalactiae ZQ0910]
gi|81454978|sp|Q8E177.1|SYI_STRA5 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|84029569|sp|Q3K2N4.1|SYI_STRA1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|22533504|gb|AAM99387.1|AE014214_1 isoleucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
gi|76563261|gb|ABA45845.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae A909]
gi|77175796|gb|EAO78575.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae H36B]
gi|389648591|gb|EIM70090.1| isoleucyl-tRNA ligase [Streptococcus agalactiae ZQ0910]
gi|406649903|gb|AFS45304.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae GD201008-001]
Length = 930
Score = 348 bits (894), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 332/643 (51%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGIL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +EY V G+ ++A+ LV++L F + ++V G+ L I HP + E
Sbjct: 247 PDMEYVVVVPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHTGKELNHIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + ++G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V LV+ + L +E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 366 G-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+ NF PE KK L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L E+G WW + LL + N K DI+D+WFDSG SW+ V+
Sbjct: 481 -DHVADLFAEYGSIVWWQRDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVM 539
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARENLSYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I D+ + +G ++LR WV + S +
Sbjct: 600 LGNTILPSDVEK-----------------------------QFGAEILRLWVTSVDSSN- 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQ 934
V I +IL + + +KIR++LR+L+ + + +++ VD YM + +
Sbjct: 630 DVRISMDILKQTSETYRKIRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTIKFNQVV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+T++ Y + + + ++NFV +LSAFY KD +Y ++ N R ++I
Sbjct: 690 DTINKAYAAYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
L + + PI+PH AEE++S+L + F V +SG
Sbjct: 750 VKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSG 792
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 230/397 (57%), Gaps = 21/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ALN GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQALNEGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K + + + +++AL ++ Q+ +F+ GV ADWE N Y T
Sbjct: 99 LPIEQVLAKKGVKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE-NPYITLTP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y K+
Sbjct: 158 DYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYANKVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--NVIVAKCLVESL 245
L TD + ++WTTTP+++ A++ + P +EY V G+ ++A+ LV+SL
Sbjct: 217 GKGIL---DTDTYIVVWTTTPFTVTASRGLTVGPDMEYVVVVPVGSERKYLLAEVLVDSL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
F + E+V G+ L I HP + E +L +L V++ GTG+VH AP G
Sbjct: 274 AAKFGWENFEIVTHHTGKELNHIVTEHPWDTEVEELVIL-GDHVTTDSGTGIVHTAPGFG 332
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD----VLWT 360
+DD+ + +A + V+ + ++G +AGP E G D+V LV+ +L +
Sbjct: 333 EDDYNVGIANGLDVVVTVDSRGLMMENAGPDFE-----GQFYDKVTPLVKEKLGDLLLAS 387
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 388 EVINHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ ++G +AGP EG + D+V LV+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDSRGLMMENAGPDFEG-----QFYDKVTPLVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E NF PE KK L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L E+G WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVADLFAEYGSIVWWQRDAKDLL 504
>gi|220931770|ref|YP_002508678.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|254782408|sp|B8CWL4.1|SYI_HALOH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|219993080|gb|ACL69683.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 929
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 218/622 (35%), Positives = 329/622 (52%), Gaps = 59/622 (9%)
Query: 418 TALAESELEYKPDHISKSIY----LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+E+EY +H S SIY LK K+N L G D + +IWTTTPW++PAN
Sbjct: 192 TALAEAEVEYG-EHRSPSIYVKFPLKDKVNVGGVELTPG--DSYVVIWTTTPWTIPANMA 248
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCD--FPGQYLQDITYIHPIN 531
IA +P +Y V G +++A+ LV+ + + + V F G L++ HP
Sbjct: 249 IALHPEFDYVVVKASGEKLVMARELVDRVMEEAEVENYKVVGQAFKGTELENKRCRHPF- 307
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
E RD L+ V+ +GTG VH AP HG DD+L+ L + + + N+G ++ +A
Sbjct: 308 -EDRDSILILGDHVTLEQGTGCVHTAPGHGHDDYLVGLKYDLDIYAPMDNRGVFTEEA-E 365
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G+ K+ L E +L ++ H YP+ WR K +I +A+ QWF E IK
Sbjct: 366 RFAGMYYDDVNKEVTKILDEKGLLMNLSFISHQYPHCWRCKGALIFRATDQWFASIEAIK 425
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEAN 708
EAL + V++ P ++ + + I++R WCISRQ+ WGVPIPVFY D I+N+
Sbjct: 426 EEALKAIHSVDWYPAWGEERMANMISERTDWCISRQKKWGVPIPVFYCKDCGHSIINDET 485
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVL 763
I+ L G W+ S E++L + K DI+D+WFDSG S VL
Sbjct: 486 IEAVKKLFAREGSSGWYKYSAEEILPEGFSCPECGGKSFKKEEDIMDVWFDSGSSHKAVL 545
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ + P+ +Y+EG DQ GWF SSLLT+VA + P+ V +GFVVD+KG KMSKS
Sbjct: 546 ETRDHLSWPSQLYLEGTDQYRGWFNSSLLTAVATEGKPPYEAVVTNGFVVDDKGNKMSKS 605
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNV+ S D+ + YG D+LR WVA+ KD
Sbjct: 606 IGNVV-----------------------SPQDV------IKRYGADILRLWVASSNFKD- 635
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + IL + + ++IR++ R++LG +++ + + +D +++ +L +
Sbjct: 636 DVRVSDRILKQNSEVYRRIRNTFRFILGNINDFNPGQHYVDYNDRAEIDRWIMIKLQDLI 695
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y E++Y R + NF E+S+ Y +VKDRLY D N +R S TL++I
Sbjct: 696 KDVTRAYDEYEYHRVYHDVHNFCTIEMSSLYVDIVKDRLYTDGTNSLSRRSAQSTLYDIL 755
Query: 995 HVLLRTVAPIMPHLAEEVYSHL 1016
VL++ VAP++ H AEEV+ HL
Sbjct: 756 LVLVKLVAPVLAHTAEEVWQHL 777
Score = 259 bits (662), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 157/391 (40%), Positives = 218/391 (55%), Gaps = 17/391 (4%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE--- 73
G +FILHDGPPYANG HIGHA+NKILKDI R L G YVPGWD HGLPIE
Sbjct: 46 GNKQFILHDGPPYANGDIHIGHALNKILKDIVTRYKTLSGYYSPYVPGWDTHGLPIEHKV 105
Query: 74 LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
K + K K LS ++R K +++AL+ + QK +F+ GV +W+ Y T + EY Q
Sbjct: 106 TKEMGDKAKDLSVSELRDKCRDYALKYVERQKEQFKRLGVWGEWD-KPYLTLNPEYEVKQ 164
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY----LKIKLNQVP 189
+ F + K+ Y+ KPV+W PS TALAE+E+EY +H S SIY LK K+N
Sbjct: 165 IEVFGEMAKRGLFYKGKKPVHWCPSCETALAEAEVEYG-EHRSPSIYVKFPLKDKVNVGG 223
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTF 249
L G D + +IWTTTPW++PAN IA +P +Y V G +++A+ LV+ +
Sbjct: 224 VELTPG--DSYVVIWTTTPWTIPANMAIALHPEFDYVVVKASGEKLVMARELVDRVMEEA 281
Query: 250 QTDIEVVCD--FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDD 307
+ + V F G L++ HP E RD L+ V+ +GTG VH AP HG DD
Sbjct: 282 EVENYKVVGQAFKGTELENKRCRHPF--EDRDSILILGDHVTLEQGTGCVHTAPGHGHDD 339
Query: 308 FLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHS 366
+L+ L + + + N+G ++ +A G+ K+ L E +L ++ H
Sbjct: 340 YLVGLKYDLDIYAPMDNRGVFTEEA-ERFAGMYYDDVNKEVTKILDEKGLLMNLSFISHQ 398
Query: 367 YPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
YP+ WR K +I +A+ QWF E IK EAL
Sbjct: 399 YPHCWRCKGALIFRATDQWFASIEAIKEEAL 429
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
H YP+ WR K +I +A+ QWF E IK EAL + V++ P ++ + + I++R W
Sbjct: 397 HQYPHCWRCKGALIFRATDQWFASIEAIKEEALKAIHSVDWYPAWGEERMANMISERTDW 456
Query: 1212 CISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
CISRQ+ WGVPIPVFY D I+N+ I+ L G W+ E++L
Sbjct: 457 CISRQKKWGVPIPVFYCKDCGHSIINDETIEAVKKLFAREGSSGWYKYSAEEIL 510
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1025 SFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1084
+FC ++ Y I K LY D N +R S TL++I VL++ VAP++ H AEEV+
Sbjct: 716 NFCTIEMSSLYV-DIVKDRLYTDGTNSLSRRSAQSTLYDILLVLVKLVAPVLAHTAEEVW 774
Query: 1085 SHL 1087
HL
Sbjct: 775 QHL 777
>gi|402830017|gb|AFR11458.1| isoleucyl-tRNA-synthetase [Lactobacillus brevis]
Length = 937
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 326/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+A+AE+E+EY D S S + ++ L TD + ++WTTTPW++P ++ I +
Sbjct: 191 SAMAEAEVEYH-DVTSPSAFYGEQVVDGKGVL---DTDTYLVVWTTTPWTIPGSEGITID 246
Query: 478 PALEYSVASVKGAN-----VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+EY+V VK AN V+ A + +N + D+ V+ GQ L ++T HP
Sbjct: 247 AGIEYAV--VKPANDDRKFVLAADLVDQNAEMFGWEDVQVIKTVMGQDLDNVTAQHPFIA 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ R L ++ FV++ GTGLVH AP G+DDF + +PVL + ++G + +AG
Sbjct: 305 D-RKLVVMLGDFVTTESGTGLVHTAPGLGEDDFNVGALYHLPVLVPVDDKGYMTAEAGAD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G+ + + L + L Y+HSYP+DWRTKKPVI +A+ QWF ++I+
Sbjct: 364 FAGVFYEDANQIALDKLKAANALLKYMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIRD 423
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E LA L++V F P+ ++ L + I R W ISRQRVWGVP+P+FY DG+ II E +
Sbjct: 424 EILAQLKDVKFQPDWGQRRLANMIKDRGDWVISRQRVWGVPLPIFYGEDGEAIITPE-TV 482
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L E+G + W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 483 DHVADLFAEYGSNIWFKREAKDLLPDGFTSEHSPNGEFTKETDIMDVWFDSGTSHQGVLA 542
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSVA AP++ V GF +D+ G KMSKS+
Sbjct: 543 ERDYLDFPADLYLEGSDQYRGWFNSSLITSVAATGKAPYKQVVSQGFTLDKDGHKMSKSL 602
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ +I + G D++R WV + S
Sbjct: 603 GNTIAPDEI-----------------------------ISKMGADIVRLWVTSVDSS-AD 632
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + D +K+R+++RYLL + T +I+ + VD +ML +L EF
Sbjct: 633 VRVSTEAFVKISDSYKKLRNTMRYLLANTSDFDPQTDAIAVDDLQPVDRHMLYQLNEFTK 692
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ Y + + + L+NFVV++LSAFY KD LY ++ + R S + I
Sbjct: 693 SVRAHYDHYDFLNIYKELINFVVSDLSAFYLDFAKDILYIEAADSPIRRSMQTVFYQIAV 752
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH AEE++ L
Sbjct: 753 SLTKLITPILPHTAEEIWDFL 773
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 230/402 (57%), Gaps = 16/402 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y +++ GKP FILHDGPPYANG H+GHA+NKI KDI +R + G R YVPG
Sbjct: 34 NKMYEARQKLNEGKPTFILHDGPPYANGPIHMGHALNKISKDIIVRYKSMSGFRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K +S + R + +AL+ ++ Q+ F+ GV A+W+ N Y
Sbjct: 94 WDTHGLPIEQQLTKAGYDRKKMSTAEFRDLCREYALKQVDQQREGFKRLGVSAEWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ ++ F + K+ IY+ KPVYWS SS +A+AE+E+EY D S S +
Sbjct: 153 LTLKPEFEAAEVRVFGEMAKRGLIYKGKKPVYWSWSSESAMAEAEVEYH-DVTSPSAFYG 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTPW++P ++ I + +EY+V VK AN ++A
Sbjct: 212 EQVVDGKGVL---DTDTYLVVWTTTPWTIPGSEGITIDAGIEYAV--VKPANDDRKFVLA 266
Query: 239 KCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
LV+ F D++V+ GQ L ++T HP + R L ++ FV++ GTGLV
Sbjct: 267 ADLVDQNAEMFGWEDVQVIKTVMGQDLDNVTAQHPFIAD-RKLVVMLGDFVTTESGTGLV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H AP G+DDF + +PVL + ++G + +AG G+ + + L +
Sbjct: 326 HTAPGLGEDDFNVGALYHLPVLVPVDDKGYMTAEAGADFAGVFYEDANQIALDKLKAANA 385
Query: 358 LWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
L Y+HSYP+DWRTKKPVI +A+ QWF ++I+ E L
Sbjct: 386 LLKYMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIRDEILA 427
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
Y+HSYP+DWRTKKPVI +A+ QWF ++I+ E LA L+ V F P+ ++ L + I R
Sbjct: 392 YEHSYPFDWRTKKPVIFRATPQWFASVDKIRDEILAQLKDVKFQPDWGQRRLANMIKDRG 451
Query: 1210 YWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQRVWGVP+P+FY DG+ II E + H L E+G + W+ + LL
Sbjct: 452 DWVISRQRVWGVPLPIFYGEDGEAIITPE-TVDHVADLFAEYGSNIWFKREAKDLL 506
>gi|58337125|ref|YP_193710.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
gi|81311485|sp|Q5FKU5.1|SYI_LACAC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|58254442|gb|AAV42679.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
Length = 927
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 219/621 (35%), Positives = 322/621 (51%), Gaps = 63/621 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + V + + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFPV--VDSKGIIDPKDTYFVIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V +VA L+ E + W D VV G ++ + HP+ +
Sbjct: 248 PKFDYSVVQVGDKKYVVATGLLDKVAEEIGWD---DYKVVQTVKGADMEYMKAKHPLYDK 304
Query: 534 QRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ L+ GF V+ GTGLVH AP G DDF + +PV + + G+Y+ D P
Sbjct: 305 E---SLVTEGFHVTLDDGTGLVHTAPGFGADDFNVGQKYDLPVFSPVDAHGRYT-DEVPE 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
LEG+ K V L + L + + HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 361 LEGMFYQDVDKLMVEKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIAPFRD 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
+ L ++ F+P K L + I R W ISRQR WGVP+P+FY D T IV I+
Sbjct: 421 QILEQIDNAKFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIE 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H + D+ G + W++ + ++LL + N TK DILD+WFDSG SWS V++
Sbjct: 481 HIAEIFDKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEK 540
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+G
Sbjct: 541 RDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLG 600
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPT 879
NVI S +D+ + G +++R WVA A + D
Sbjct: 601 NVI-----------------------SPNDV------IKRMGAEIIRLWVAQADTTSDVA 631
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V +G IL S + +KIR++ RY+L + ++ R VD YM +L +
Sbjct: 632 VSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENGVAYDDLRSVDQYMEIKLNDLVA 689
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y +F + + + NF+ N+LSAFY KD LY + N R S +++
Sbjct: 690 ECLAAYDKFDFTTVFKKIFNFISNDLSAFYLDFAKDVLYIEGKNSLERRSMQTVIYDAAV 749
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++ L
Sbjct: 750 KLTKILTPILPHTMEEIWGFL 770
Score = 240 bits (612), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 216/385 (56%), Gaps = 20/385 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F LHDGPP+ANG H+GHA+NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGHPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + +A E + Q +F+ GV+ADW+ N Y T
Sbjct: 99 LPVEQQLAKKGIDRKTMDRAKYRELCRQYAEEQVQKQMTDFKRLGVMADWD-NPYITLQH 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ ++ F +YK+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++ +
Sbjct: 158 EFEGQEIRVFGEMYKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFPV-- 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV----E 243
V + + D + +IWTTTPW++PAN+ I NP +YSV V +VA L+ E
Sbjct: 215 VDSKGIIDPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKKYVVATGLLDKVAE 274
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPA 302
+ W D +VV G ++ + HP+ ++ L+ GF V+ GTGLVH AP
Sbjct: 275 EIGW---DDYKVVQTVKGADMEYMKAKHPLYDKE---SLVTEGFHVTLDDGTGLVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-E 361
G DDF + +PV + + G+Y+ D P LEG+ K V L + L +
Sbjct: 329 FGADDFNVGQKYDLPVFSPVDAHGRYT-DEVPELEGMFYQDVDKLMVEKLKDAGALLKLK 387
Query: 362 NYQHSYPYDWRTKKPVILKASQQWF 386
+ HSYP+DWRTKKPVI +A+ QWF
Sbjct: 388 VFTHSYPHDWRTKKPVIFRATTQWF 412
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ G+Y+ D P LEG+ K V L + L + + HSYP+DWRTKKPVI +
Sbjct: 348 VDAHGRYT-DEVPELEGMFYQDVDKLMVEKLKDAGALLKLKVFTHSYPHDWRTKKPVIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + L ++ F+P K L + I R W ISRQR WGVP+P+FY
Sbjct: 407 ATTQWFASIAPFRDQILEQIDNAKFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFY 466
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T IV I+H + D+ G + W++ ++LL
Sbjct: 467 AEDGTPIVTPETIEHIAEIFDKEGSNAWYTHTAKELL 503
>gi|347726977|gb|AEP19847.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. EPVM]
Length = 908
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 221/619 (35%), Positives = 319/619 (51%), Gaps = 56/619 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S +IY+ ++ L AT H +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYY-DKKSPAIYVAFQVVDGKGVL---ATTDHFVIWTTTPWTIPANLGIAVS 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
L Y+ G IVA+ LVE++ TD V + G+ + +T HP+
Sbjct: 247 DELTYTRIEHDGKGYIVAETLVEDVTTALGWTDYTVSGSWNGREFEHMTAQHPLYDRT-- 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L+ G ++ TGLVH AP HG+DD+ + A + VL + ++G Y + PG EGL
Sbjct: 305 -SLVMIGDHVTADATGLVHTAPGHGEDDYRVGQAYGLDVLCPVDDRG-YMTEEAPGFEGL 362
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K + L E L + +HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 FYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRADMLR 422
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+EEVN+VPE L + + R W ISRQR WGVPIP+FY DG II NE I H
Sbjct: 423 EIEEVNWVPEWGMTRLYNMVRDRGDWVISRQRAWGVPIPIFYAEDGTEIITNE-TIDHIA 481
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + + N K DI+D+WFDSG S + VL+ +
Sbjct: 482 NLFHEHGSNVWYEREAKDLLPEGFTHPNSPNGEFRKELDIMDVWFDSGSSHAGVLEQRDN 541
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA AP+RNV HGFV+D G KMSKS+GN I
Sbjct: 542 LRRPADLYLEGSDQYRGWFNSSLSTAVATTGKAPYRNVLSHGFVLDGDGRKMSKSLGNTI 601
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ +D+ + YG +++R WV++ V
Sbjct: 602 APNDLVK-----------------------------QYGAEIVRLWVSS-VDYQADVRAS 631
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR---YVDVYMLKRLCEFQNTMDTL 940
+ + +KIR++LR+LLG L+ S D +M +L + Q +
Sbjct: 632 HDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFEDMPEADRFMATKLKQLQTKVVKA 691
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y F + + NF VNELS+FY KD LY + + R + +++ L +
Sbjct: 692 YDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIEREDDARRRAVQTVMYDTVVTLTKL 751
Query: 1001 VAPIMPHLAEEVYSHLPSR 1019
+API+PH A+EV+ +P++
Sbjct: 752 LAPILPHTADEVWQEVPAK 770
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/399 (40%), Positives = 232/399 (58%), Gaps = 19/399 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+ +E GKP++ILHDGPPYANG H+GHA+NK+LKDI +R L G + +PGW
Sbjct: 35 DLYNRVQEKNAGKPQYILHDGPPYANGDIHMGHALNKVLKDIIVRFKSLNGYQSPMIPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L+ K ++ + R+K +A+E +N+Q+ +F+ G++AD++ N Y
Sbjct: 95 DTHGLPIENALQKAGVNRKEMTVAEFREKCAAYAMEQVNSQREQFKRLGLMADFD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + ++ YIY+ KPVYWSPSS +ALAE+E+EY D S +IY+
Sbjct: 154 TLLPEYEAAQIRLFGTMAEKGYIYKGKKPVYWSPSSESALAEAEIEYY-DKKSPAIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
++ L AT H +IWTTTPW++PAN IA + L Y+ G IVA+ LVE
Sbjct: 213 QVVDGKGVL---ATTDHFVIWTTTPWTIPANLGIAVSDELTYTRIEHDGKGYIVAETLVE 269
Query: 244 ----SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
+L W TD V + G+ + +T HP+ L+ G ++ TGLVH
Sbjct: 270 DVTTALGW---TDYTVSGSWNGREFEHMTAQHPLYDRT---SLVMIGDHVTADATGLVHT 323
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DD+ + A + VL + ++G Y + PG EGL K + L E L
Sbjct: 324 APGHGEDDYRVGQAYGLDVLCPVDDRG-YMTEEAPGFEGLFYEDANKQIGMKLEENGYLL 382
Query: 360 TENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 383 NLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRADML 421
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 1115 YSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWF 1173
Y + PG EGL K + L E L + +HSYP+DWRTKKPVI +A+ QWF
Sbjct: 351 YMTEEAPGFEGLFYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVIFRATPQWF 410
Query: 1174 IDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDT 1231
+ + + L +E VN+VPE L + + R W ISRQR WGVPIP+FY DG
Sbjct: 411 ASIKDFRADMLREIEEVNWVPEWGMTRLYNMVRDRGDWVISRQRAWGVPIPIFYAEDGTE 470
Query: 1232 IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
II NE I H L EHG + W+ + LL
Sbjct: 471 IITNE-TIDHIANLFHEHGSNVWYEREAKDLL 501
>gi|227903700|ref|ZP_04021505.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
gi|227868587|gb|EEJ76008.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
Length = 927
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 219/621 (35%), Positives = 321/621 (51%), Gaps = 63/621 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + V + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFPV--VDGKGIIDPKDTYFVIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V +VA L+ E + W D VV G ++ + HP+ +
Sbjct: 248 PKFDYSVVQVGDKKYVVATGLLDKVAEEIGWD---DYKVVQTVKGADMEYMKAKHPLYDK 304
Query: 534 QRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+ L+ GF V+ GTGLVH AP G DDF + +PV + + G+Y+ D P
Sbjct: 305 E---SLVTEGFHVTLDDGTGLVHTAPGFGADDFNVGQKYDLPVFSPVDAHGRYT-DEVPE 360
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
LEG+ K V L + L + + HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 361 LEGMFYQDVDKLMVEKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIAPFRD 420
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
+ L ++ F+P K L + I R W ISRQR WGVP+P+FY D T IV I+
Sbjct: 421 QILEQIDNAKFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIE 480
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H + D+ G + W++ + ++LL + N TK DILD+WFDSG SWS V++
Sbjct: 481 HIAEIFDKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEK 540
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+G
Sbjct: 541 RDGLHYPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLG 600
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPT 879
NVI S +D+ + G +++R WVA A + D
Sbjct: 601 NVI-----------------------SPNDV------IKRMGAEIIRLWVAQADTTSDVA 631
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V +G IL S + +KIR++ RY+L + ++ R VD YM +L +
Sbjct: 632 VSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENGVAYDDLRSVDQYMEIKLNDLVA 689
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y +F + + + NF+ N+LSAFY KD LY + N R S +++
Sbjct: 690 ECLAAYDKFDFTTVFKKIFNFISNDLSAFYLDFAKDVLYIEGKNSLERRSMQTVIYDAAV 749
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++ L
Sbjct: 750 KLTKILTPILPHTMEEIWGFL 770
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 215/385 (55%), Gaps = 20/385 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN G P F LHDGPP+ANG H+GHA+NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGHPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + +A E + Q +F+ GV+ADW+ N Y T
Sbjct: 99 LPVEQQLAKKGIDRKTMDRAKYRELCRQYAEEQVQKQMTDFKRLGVMADWD-NPYITLQH 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ ++ F +YK+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++ +
Sbjct: 158 EFEGQEIRVFGEMYKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFVAFPV-- 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV----E 243
V + D + +IWTTTPW++PAN+ I NP +YSV V +VA L+ E
Sbjct: 215 VDGKGIIDPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKKYVVATGLLDKVAE 274
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPA 302
+ W D +VV G ++ + HP+ ++ L+ GF V+ GTGLVH AP
Sbjct: 275 EIGW---DDYKVVQTVKGADMEYMKAKHPLYDKE---SLVTEGFHVTLDDGTGLVHTAPG 328
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-E 361
G DDF + +PV + + G+Y+ D P LEG+ K V L + L +
Sbjct: 329 FGADDFNVGQKYDLPVFSPVDAHGRYT-DEVPELEGMFYQDVDKLMVEKLKDAGALLKLK 387
Query: 362 NYQHSYPYDWRTKKPVILKASQQWF 386
+ HSYP+DWRTKKPVI +A+ QWF
Sbjct: 388 VFTHSYPHDWRTKKPVIFRATTQWF 412
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ G+Y+ D P LEG+ K V L + L + + HSYP+DWRTKKPVI +
Sbjct: 348 VDAHGRYT-DEVPELEGMFYQDVDKLMVEKLKDAGALLKLKVFTHSYPHDWRTKKPVIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + L ++ F+P K L + I R W ISRQR WGVP+P+FY
Sbjct: 407 ATTQWFASIAPFRDQILEQIDNAKFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFY 466
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T IV I+H + D+ G + W++ ++LL
Sbjct: 467 AEDGTPIVTPETIEHIAEIFDKEGSNAWYTHTAKELL 503
>gi|336054341|ref|YP_004562628.1| isoleucyl-tRNA synthetase [Lactobacillus kefiranofaciens ZW3]
gi|333957718|gb|AEG40526.1| Isoleucyl-tRNA synthetase [Lactobacillus kefiranofaciens ZW3]
Length = 927
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 218/618 (35%), Positives = 321/618 (51%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YSV V +VA L+E + D VV G ++ + HPI ++
Sbjct: 248 PKFDYSVVQVGDKKYVVASGLLEKVAEEIGWDNYKVVQTVKGADMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G+DDF + +P+ + + G Y+ D P L+G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQKYHLPIFSPVDAHGCYT-DEVPELKG 363
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K V L + L + + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 364 MFYQDVDKLMVQKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIAPFREQIL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+ NF+P K L + I R W ISRQR WGVP+P+FY D T IV I H
Sbjct: 424 DQIEKANFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIDHIA 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
+ ++ G + W++ + ++LL + N TK DILD+WFDSG SWS V++ +
Sbjct: 484 KIFEKEGSNAWYTHTAKELLPEGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEKRDG 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+GNVI
Sbjct: 544 LHYPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVI 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPTVPI 882
S +D+ + G +++R WVA A + D V +
Sbjct: 604 -----------------------SPNDV------IKRMGAEIIRLWVAQADTTSDVAVSM 634
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
G IL S + +KIR++ RY+L + ++ R VD YM +L +
Sbjct: 635 G--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYADLRSVDQYMEVKLNDLVKDCL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +F + + + NF+ N+LSAFY KD LY D + AR S +++ L
Sbjct: 693 AAYDKFDFTTVFKKVFNFISNDLSAFYLDFAKDVLYIDGKDSHARRSMQTVIYDAAVKLA 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++ L
Sbjct: 753 KILTPILPHTMEEIWGFL 770
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 218/388 (56%), Gaps = 15/388 (3%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN GKP F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 34 NKLYE-QRLKLNEGKPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E I Q +F+ GV+ADW+H
Sbjct: 93 GWDTHGLPVEQQLAKKGVDRKTMDRAKYRELCRQYAEEQIQKQMTDFKRLGVMADWDH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F +YK+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITLQHDFEAQEIRVFGEMYKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + D + +IWTTTPW++PAN+ I NP +YSV V +VA L
Sbjct: 211 AFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKKYVVASGL 268
Query: 242 VESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHC 299
+E + D +VV G ++ + HPI ++ L+ GF V+ GTGLVH
Sbjct: 269 LEKVAEEIGWDNYKVVQTVKGADMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DDF + +P+ + + G Y+ D P L+G+ K V L + L
Sbjct: 326 APGFGEDDFNVGQKYHLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMVQKLKDAGALL 384
Query: 360 T-ENYQHSYPYDWRTKKPVILKASQQWF 386
+ + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWF 412
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF + + L +E NF+P K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASIAPFREQILDQIEKANFIPSWGKTRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I H + ++ G + W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIDHIAKIFEKEGSNAWYTHTAKELL 503
>gi|322372695|ref|ZP_08047231.1| isoleucine--tRNA ligase [Streptococcus sp. C150]
gi|321277737|gb|EFX54806.1| isoleucine--tRNA ligase [Streptococcus sp. C150]
Length = 932
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 210/617 (34%), Positives = 323/617 (52%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTMG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+Y V G++ +VA L+ +L F D++V+ + G+ L I HP + E
Sbjct: 247 ADFDYVVVKPAGSDRKYVVASELLPSLSEKFGWEDVEVLATYQGKELDQIVTEHPWDSEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V+ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTLDSGTGIVHTAPGFGEDDYNVGVANGLEVAVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVVPTVIDKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK NDI+D+WFDSG SW+ V+ ++P
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + + + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDTTN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +T +++ R VD YM R + T+
Sbjct: 635 MDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEELRSVDQYMTIRFNQLVKTIRD 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ + L+NF+ ELSAFY KD +Y +S + R ++I + +
Sbjct: 695 AYANFEFLTIYKALVNFINVELSAFYLDFAKDVVYIESADSLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+ PI+PH AEE++S+L
Sbjct: 755 LLTPILPHTAEEIWSYL 771
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 221/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 ANMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIERSEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +Y V G++ +VA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTMGADFDYVVVKPAGSDRKYVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D+EV+ + G+ L I HP + E +L +L V+ GTG+VH
Sbjct: 269 LLPSLSEKFGWEDVEVLATYQGKELDQIVTEHPWDSEVDELVIL-GDHVTLDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVAVTVNERGIMMENAGPDFAG-QFYDKVVPTVIDKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 10/160 (6%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP + G+ D+V+ V + L E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGP-----DFAGQFYDKVVPTVIDKLGDLLLAKEEISHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E V F E K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY D T I+ E I+H L +EHG WW + LL
Sbjct: 465 IFYAEDKTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|6137708|pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure
With Trna(Ile) And Mupirocin
gi|6137710|pdb|1QU3|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure
With Trna(Ile) And Mupirocin
gi|10121057|pdb|1FFY|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure
With Trna(Ile) And Mupirocin
Length = 917
Score = 348 bits (892), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 216/622 (34%), Positives = 323/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFNVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEWVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + DD +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDDYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFNVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEWVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQQYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 109 bits (273), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|419706458|ref|ZP_14233979.1| Isoleucyl-tRNA synthetase [Streptococcus salivarius PS4]
gi|383283779|gb|EIC81722.1| Isoleucyl-tRNA synthetase [Streptococcus salivarius PS4]
Length = 932
Score = 348 bits (892), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/618 (34%), Positives = 322/618 (52%), Gaps = 56/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTMG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+Y V G++ +VA L+ +L F D++V+ + G+ L I HP + E
Sbjct: 247 ADFDYVVVKPAGSDRKYVVASELLPSLSEKFGWEDVEVLATYQGKELDHIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V+ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTLDSGTGIVHTAPGFGEDDYNVGVANGLEVAVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVVPTVIDKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK NDI+D+WFDSG SW+ V+ ++
Sbjct: 485 KLFEEHGSVIWWERDAKDLLPVGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDPTVPI 882
+ D+ + +G ++LR WV + S D V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVISVDTSND--VRI 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
+IL+ + +KIR++LR+LL + + T +++ R VD YM R + T+
Sbjct: 634 SMDILSQVSESYRKIRNTLRFLLANTSDFNPKTDAVAFEELRSVDQYMTIRFNQLVKTIR 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y F++ + L+NF+ ELSAFY KD +Y +S + R ++I +
Sbjct: 694 DAYANFEFLTIYKALVNFINIELSAFYLDFAKDVVYIESADSLERRQMQTVFYDILVKIT 753
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH AEE++S+L
Sbjct: 754 KLLTPILPHTAEEIWSYL 771
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 221/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 ANMYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + + K +++AL ++ Q+ +F+ GV ADW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIERSEYLKMCRDYALSQVDKQREDFKRLGVSADWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +Y V G++ +VA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTMGADFDYVVVKPAGSDRKYVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D+EV+ + G+ L I HP + E +L +L V+ GTG+VH
Sbjct: 269 LLPSLSEKFGWEDVEVLATYQGKELDHIVTEHPWDTEVDELVIL-GDHVTLDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVAVTVNERGIMMENAGPDFAG-QFYDKVVPTVIDKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 KEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 10/160 (6%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP + G+ D+V+ V + L E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGP-----DFAGQFYDKVVPTVIDKLGDLLLAKEEISHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E V F E K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY D T I+ E I+H L +EHG WW + LL
Sbjct: 465 IFYAEDKTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|147804918|emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]
Length = 1088
Score = 348 bits (892), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 227/682 (33%), Positives = 346/682 (50%), Gaps = 112/682 (16%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVP----AHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY HISKSIY +L P L + DL IWTTTPW++PAN
Sbjct: 256 TALAEAELEYPEGHISKSIYAIFRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANAA 315
Query: 474 IAFNPALEYSVASV-------------------------KGANVIVAKCLVENLKWTFQT 508
+A N L+YSV V K ++VA LV L+ +
Sbjct: 316 VAVNAKLQYSVVEVHSPLEDVSKSKQNEKGRLGNALKEQKNLFLVVASDLVPTLEAKWGL 375
Query: 509 DIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAG-FVSSSKGTGLVHCAPAHGQDDFLL 567
+ + G L++ YIHPI+K R+ ++ G ++++ GTGLVH AP HGQ+D++
Sbjct: 376 KLVIKKTLLGSDLENCRYIHPIDK--RECPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 433
Query: 568 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYP 625
+ +P+L+ + + GK++ +AG GL++LGDG V+ ++ + ++ E Y+H YP
Sbjct: 434 GMKYGLPILSPVDDDGKFTEEAGQ-FSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYP 492
Query: 626 YDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKK---------TLRDQIA 676
YDWRTKKP I +A++QWF E + A+ + +V ++P ++ T++ ++
Sbjct: 493 YDWRTKKPTIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQIEQPXPKSNGNGTMKKKVV 552
Query: 677 QRPYWCISRQRVWGVPIPV-FYDGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNT 735
R +S P+ + G + + ++ F +++ + G D WW ++VE+LL
Sbjct: 553 NR----LSISFAKNAPLRTEXFVGSSQLQLVISVTTFPSIVSQKGSDAWWYMTVEELLPD 608
Query: 736 SDVN--SNVTKSNDILDIWFDS----------------------------GISWSHVLKD 765
N S+ K D +D+WFDS G SW+ VL+
Sbjct: 609 KYRNKASDYEKGTDTMDVWFDSVKTYFLLMRIQEEAEIKFGVDSKYALKEGSSWAAVLES 668
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSLLTSVA K AP+ +V HGFV+DEKG KMSKS+G
Sbjct: 669 RNELSCPADLYLEGTDQHRGWFQSSLLTSVATKGRAPYSSVITHGFVLDEKGFKMSKSLG 728
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV+ + +G K L K+ P YG DVLR WV++ +
Sbjct: 729 NVVDPRTVIEGGKNL--------------------KEAPGYGADVLRLWVSSVDYTGDAM 768
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKR--LCEFQNTMD 938
IG +L D +K+R +LRYLL LH+ Y D+ M+ R L + +N +
Sbjct: 769 -IGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA--VPYCDLPMIDRHALFQLENVVK 825
Query: 939 TL---YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y +Q+ + +++ F + +LS FYF + KDRLY R S L
Sbjct: 826 NIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKDRLYVGGTTSFTRRSCQTVLAAHLL 885
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
++R +API+PHLAE+V+ +LP
Sbjct: 886 SIVRVIAPILPHLAEDVWQNLP 907
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/417 (39%), Positives = 229/417 (54%), Gaps = 60/417 (14%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLR-SNLLQGKRVHYVPGWDCHGLPIEL 74
N FILHDGPPYANG H+GHA+NKILKDI R +L Q R
Sbjct: 134 NNGGNFILHDGPPYANGDLHMGHALNKILKDIINRYKSLDQDAR---------------- 177
Query: 75 KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQL 134
+ L+PL +R KA FA T+ Q A F+ +GV DW +N Y T D EY +Q+
Sbjct: 178 -------RELTPLKLRAKASRFAKATVKNQMASFKRYGVWGDW-NNPYLTLDPEYEASQI 229
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP----A 190
F + Q YIYR KPV+WSPSSRTALAE+ELEY H+SKSIY +L P
Sbjct: 230 EVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFRLVSAPVTSGT 289
Query: 191 HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV-------------------- 230
L + DL IWTTTPW++PAN +A N L+YSV V
Sbjct: 290 SLEDFLPDLCLAIWTTTPWTIPANAAVAVNAKLQYSVVEVHSPLEDVSKSKQNEKGRLGN 349
Query: 231 -----KGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPA 285
K ++VA LV +L+ + + + G L++ YIHPI+K R+ ++
Sbjct: 350 ALKEQKNLFLVVASDLVPTLEAKWGLKLVIKKTLLGSDLENCRYIHPIDK--RECPVVIG 407
Query: 286 G-FVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGD 344
G ++++ GTGLVH AP HGQ+D++ + +P+L+ + + GK++ +AG GL++LGD
Sbjct: 408 GDYITTESGTGLVHTAPGHGQEDYVTGMKYGLPILSPVDDDGKFTEEAGQ-FSGLDVLGD 466
Query: 345 GKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
G V+ ++ + ++ E Y+H YPYDWRTKKP I +A++QWF E + A+
Sbjct: 467 GNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKPTIFRATEQWFASVEGFRQVAMTA 523
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + + GK++ +AG GL++LG+G V+ ++ + ++ E Y+H YPYDWRTKKP
Sbjct: 442 LSPVDDDGKFTEEAGQ-FSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKP 500
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKK---------SLRDQIAQRPYWCIS 1214
I +A++QWF E + A+ + V ++P ++ +++ ++ R +S
Sbjct: 501 TIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQIEQPXPKSNGNGTMKKKVVNR----LS 556
Query: 1215 RQRVWGVPIPV-FYDGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+ + G + + ++ F +++ + G D WW + VE+LL
Sbjct: 557 ISFAKNAPLRTEXFVGSSQLQLVISVTTFPSIVSQKGSDAWWYMTVEELL 606
>gi|409047568|gb|EKM57047.1| hypothetical protein PHACADRAFT_208201 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1021
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 223/664 (33%), Positives = 334/664 (50%), Gaps = 75/664 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAF 476
+ALAESELEYK H+S S+Y+ L L G + L+WTTTPW+L AN IA
Sbjct: 215 SALAESELEYKDAHVSHSVYVTFDLESTTTGALSGVEGPIRLLVWTTTPWTLTANMGIAV 274
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQTDID------VVCDFPGQYLQDITY---I 527
+P ++Y V A + K Q +D + PG L ++ Y
Sbjct: 275 SPEMQYVVGCSSQDPEAGALIFALDRKEDLQPILDGMGIDEIKITIPGSALVELKYRSLF 334
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIP--VLNLITNQGKY 585
N + L +LP+ V+ GTG+VH APAHGQ+D+ L + + ++ + +G++
Sbjct: 335 SSRNDAPQSLSILPSSHVTPDSGTGVVHLAPAHGQEDYELFRSRGLTSDMVCHVDRRGRF 394
Query: 586 SP-------DAGPG-LEGLNILGDG-KDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVI 635
+ +A G L G +L +G K V L E VL + Y+H YPYDW+T +P+I
Sbjct: 395 TSSVITVVGEAFAGRLIGKEVLSEGGKAMVDILTELQVLKKIQRYKHRYPYDWKTDQPII 454
Query: 636 LKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPV 695
+ A+ QWF + + IK +A+ L+EV+F P ++ L + R WCISRQRVWGVPIP
Sbjct: 455 MMATSQWFANLDAIKGDAINALQEVDFFPAVSRNRLEAFVRSRSEWCISRQRVWGVPIPA 514
Query: 696 FYD--GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS------DVNSNVTKSND 747
Y ++ I+ ++ H ++++ G WW+ SV + S DV+ K D
Sbjct: 515 LYHLPTESAILTPDSLTHIISVLERKGTRRWWNGSVADFVPPSLLFPGEDVDKTWVKGTD 574
Query: 748 ILDIWFDSGISW-----------SHVLKDKPAHVYMEGMDQINGWFMSSLLTSVA---LK 793
+D+WFDSG SW S + + A V +EG DQ GWF S LLT+VA LK
Sbjct: 575 TMDVWFDSGTSWSLLEGLAQVETSQKVPGRYADVCLEGSDQHRGWFQSLLLTAVASAPLK 634
Query: 794 H--TAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDI 851
AP+ + HG V+DE KMSKS+GN+++ I G K
Sbjct: 635 KPPVAPYGALITHGMVLDENDRKMSKSIGNIVTPQTIIHGGKD----------------- 677
Query: 852 TQGAKKLPAYGVDVLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN 910
KK PAYG VLR WVA +D + IG +L+ ++++KIR++ R+LLG L +
Sbjct: 678 ---TKKEPAYGTGVLRLWVATVEVGRD--MSIGPTVLSQCVENLRKIRNTARFLLGNLGD 732
Query: 911 H-----SESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFY 965
H ++ + D Y++ +L E ++T Y + + + L NF LS Y
Sbjct: 733 HRLSDEDKAPRELLGMTDRYVMHKLHELESTAREGYSTYNFPKVVAALSNFANITLSTLY 792
Query: 966 FTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY-SHLPSRQGTFS 1024
F KD LYCD+ + R + + + + + + +API+PHLAEE++ + P S
Sbjct: 793 FDTTKDPLYCDAKDSVRRRAIVTVMEQLLDTITKVMAPILPHLAEEIHQTRYPEGTEVSS 852
Query: 1025 SFCH 1028
FC
Sbjct: 853 VFCQ 856
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/417 (39%), Positives = 238/417 (57%), Gaps = 27/417 (6%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY WQ E G P F+ HDGPPYANG H+GHA+NKILKDI R ++ G+RVHYVPGWD
Sbjct: 58 LYEWQWENAKG-PLFVFHDGPPYANGDLHMGHALNKILKDIINRYHVSVGERVHYVPGWD 116
Query: 67 CHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NCY 122
CHGLPIE LKA+ +S + IR++A+ +A E + +QK +F+S G++A W+ Y
Sbjct: 117 CHGLPIEQKVLKALRKDVDEVSSVTIRQEAEKYAKEQVESQKDQFKSLGIMAKWDRETTY 176
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D +Y QL F + ++ I+R +PV++SPSS++ALAESELEYK HVS S+Y+
Sbjct: 177 RTMDHDYEMRQLRIFQKMVERGLIFRQHRPVHYSPSSQSALAESELEYKDAHVSHSVYVT 236
Query: 183 IKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
L L G + L+WTTTPW+L AN IA +P ++Y V A
Sbjct: 237 FDLESTTTGALSGVEGPIRLLVWTTTPWTLTANMGIAVSPEMQYVVGCSSQDPEAGALIF 296
Query: 242 VESLKWTFQTDI------EVVCDFPGQYLQDITY---IHPINKEQRDLKLLPAGFVSSSK 292
K Q + E+ PG L ++ Y N + L +LP+ V+
Sbjct: 297 ALDRKEDLQPILDGMGIDEIKITIPGSALVELKYRSLFSSRNDAPQSLSILPSSHVTPDS 356
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIP--VLNLITNQGKYSP-------DAGPG-LEGLNIL 342
GTG+VH APAHGQ+D+ L + + ++ + +G+++ +A G L G +L
Sbjct: 357 GTGVVHLAPAHGQEDYELFRSRGLTSDMVCHVDRRGRFTSSVITVVGEAFAGRLIGKEVL 416
Query: 343 GD-GKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ GK V L E VL + Y+H YPYDW+T +P+I+ A+ QWF + + IK +A+
Sbjct: 417 SEGGKAMVDILTELQVLKKIQRYKHRYPYDWKTDQPIIMMATSQWFANLDAIKGDAI 473
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 11/202 (5%)
Query: 1072 VAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYHHL--NLITNQGKYSPDAGPG-LEGLNI 1128
V + P +E Y SR T CH ++IT G +A G L G +
Sbjct: 360 VVHLAPAHGQEDYELFRSRGLTSDMVCHVDRRGRFTSSVITVVG----EAFAGRLIGKEV 415
Query: 1129 LGEG-KDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALAC 1186
L EG K V L E VL + Y+H YPYDW+T +P+I+ A+ QWF + + IK +A+
Sbjct: 416 LSEGGKAMVDILTELQVLKKIQRYKHRYPYDWKTDQPIIMMATSQWFANLDAIKGDAINA 475
Query: 1187 LEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD--GDTIIVNEANIKHFCT 1244
L+ V+F P ++ L + R WCISRQRVWGVPIP Y ++ I+ ++ H +
Sbjct: 476 LQEVDFFPAVSRNRLEAFVRSRSEWCISRQRVWGVPIPALYHLPTESAILTPDSLTHIIS 535
Query: 1245 LIDEHGPDFWWSLPVEQLLNTS 1266
+++ G WW+ V + S
Sbjct: 536 VLERKGTRRWWNGSVADFVPPS 557
>gi|406669223|ref|ZP_11076503.1| isoleucine-tRNA ligase [Facklamia ignava CCUG 37419]
gi|405584020|gb|EKB57946.1| isoleucine-tRNA ligase [Facklamia ignava CCUG 37419]
Length = 927
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 221/626 (35%), Positives = 328/626 (52%), Gaps = 64/626 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EYK D S SIY+ P G HA +IWTTTPW+LPAN I+
Sbjct: 192 SSLAEAEIEYK-DVKSPSIYVAF-----PVRSGSGVVPDHAEFVIWTTTPWTLPANLGIS 245
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
Y V IVAK L+E + + VV ++ G + HP
Sbjct: 246 VLGEATYVAVEVGTRIFIVAKDLLETIANEIGWENYQVVKEYQGAEFDRLKVKHPFY--D 303
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
RD ++ V+ GTGLVH AP HG+DDF++ + VL+ + N+G ++ D PG E
Sbjct: 304 RDSLVMVGDHVTLESGTGLVHTAPGHGEDDFIIGQRYGLEVLSPVDNRGHFT-DEAPGFE 362
Query: 595 GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ L G+ +VL ++E + +L+ +HSYP+DWRTK+PVI +A+ QWF ++ + +
Sbjct: 363 GMFYL-KGQKEVLKIIEENGTLLYLSEIEHSYPHDWRTKQPVIFRATPQWFASIDKFRDQ 421
Query: 653 ALACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
L +E EV + S + + + I R W ISRQRVWGVP+P+FY DG+ II + I
Sbjct: 422 LLDAVENEVTWYHPSGLRRIYNMIRDRGDWVISRQRVWGVPLPIFYGEDGEPIIDRQV-I 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L++EHG + W+ + LL + S N TK DI+D+WFDSG SWS VL+
Sbjct: 481 DHVADLVEEHGTNIWFEWEPKDLLPEGYQHPSSPNGQFTKELDIMDVWFDSGSSWSGVLE 540
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF SS TSVA + P++ V GFV+D KG KMSKS+
Sbjct: 541 TREELSYPADLYLEGSDQYRGWFNSSFTTSVATRDMPPYKAVLSQGFVMDGKGQKMSKSI 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV I+ +ITQ G D++R WV++ +
Sbjct: 601 GNV-----------------------ITPEEITQDL------GADIIRLWVSS-VDYEND 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY-----VDVYMLKRLCEFQ 934
V I ++ILN + +KIR++ R++L + + + VD YM+ +
Sbjct: 631 VRISRDILNQVAEAYRKIRNTFRFILSNIEADFDPAVDCVQEEEMEPVDRYMMSQYRLLV 690
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ M Y +++ R + L+NFV +LSAFY + KD +Y + +N R S + I
Sbjct: 691 HDMHEAYTHYEFNRVYKRLINFVTVDLSAFYSDIAKDIVYIEQMNNRKRRSIQTVFYEIL 750
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQ 1020
L R + PI+ H EE++ +P +
Sbjct: 751 SGLTRMLTPILLHTMEEIWQFIPGAE 776
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/406 (41%), Positives = 237/406 (58%), Gaps = 29/406 (7%)
Query: 9 SWQREAL--------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 60
W++E++ GKP FILHDGPPYANG H+GHA+NKI KD +R + G R
Sbjct: 30 EWEKESIYQKIQQKNEGKPTFILHDGPPYANGQLHMGHALNKISKDFIVRYYSMNGHRAP 89
Query: 61 YVPGWDCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLAD 116
YVPGWD HGLPIE +A+ + DK+ LS + RK + +AL+ + QKA+F+ GV D
Sbjct: 90 YVPGWDTHGLPIE-QALVNSDKVDRKSLSTAEFRKLCEAYALKQVENQKADFKRLGVTGD 148
Query: 117 WEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVS 176
W+H Y T EY QL F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S
Sbjct: 149 WDH-PYLTLTPEYEAQQLRVFGKMAERGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKS 206
Query: 177 KSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
SIY+ P G HA +IWTTTPW+LPAN I+ Y V
Sbjct: 207 PSIYVAF-----PVRSGSGVVPDHAEFVIWTTTPWTLPANLGISVLGEATYVAVEVGTRI 261
Query: 235 VIVAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
IVAK L+E++ + +VV ++ G + HP RD ++ V+ G
Sbjct: 262 FIVAKDLLETIANEIGWENYQVVKEYQGAEFDRLKVKHPFY--DRDSLVMVGDHVTLESG 319
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
TGLVH AP HG+DDF++ + VL+ + N+G ++ D PG EG+ L G+ +VL ++
Sbjct: 320 TGLVHTAPGHGEDDFIIGQRYGLEVLSPVDNRGHFT-DEAPGFEGMFYL-KGQKEVLKII 377
Query: 354 EPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E + +L+ +HSYP+DWRTK+PVI +A+ QWF ++ + + L
Sbjct: 378 EENGTLLYLSEIEHSYPHDWRTKQPVIFRATPQWFASIDKFRDQLL 423
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 100/163 (61%), Gaps = 8/163 (4%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ + N+G ++ D PG EG+ L +G+ +VL ++E + +L+ +HSYP+DWRTK+P
Sbjct: 345 LSPVDNRGHFT-DEAPGFEGMFYL-KGQKEVLKIIEENGTLLYLSEIEHSYPHDWRTKQP 402
Query: 1164 VILKASQQWFIDTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
VI +A+ QWF ++ + + L +E V + S + + + I R W ISRQRVWGVP
Sbjct: 403 VIFRATPQWFASIDKFRDQLLDAVENEVTWYHPSGLRRIYNMIRDRGDWVISRQRVWGVP 462
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+P+FY DG+ II + I H L++EHG + W+ + LL
Sbjct: 463 LPIFYGEDGEPIIDRQV-IDHVADLVEEHGTNIWFEWEPKDLL 504
>gi|357008379|ref|ZP_09073378.1| IleS [Paenibacillus elgii B69]
Length = 922
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 210/622 (33%), Positives = 327/622 (52%), Gaps = 61/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + L D +IWTTTPW++PAN I+ +
Sbjct: 192 SALAEAEIEYR-DKTSASIYVAFDVQDGKGKL---PADAAIVIWTTTPWTIPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVE----NLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y + G ++A+ L+E + WT D++V+ F G ++ + HP
Sbjct: 248 PDFDYVLVETGGRKFVLAQGLLEAASKEIGWT---DMNVLQTFKGSEIEHVLCRHPFY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V+ GTG VH AP HG+DDF++ + VL + +QG + +A PG
Sbjct: 303 DRTSLVMTGEHVTLEAGTGCVHTAPGHGEDDFVIGQKYGLGVLCPVDDQGHMTAEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K L E L ++ QH YP+DWRTKKPVI +A++QWF ++ +
Sbjct: 362 EGLFYDKANKAITEKLQESGHLLKMSFIQHQYPHDWRTKKPVIFRATEQWFASVDKFRQA 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++ V + PE + L + IA R WCISRQR WGVPIP+FY + +VNE I+
Sbjct: 422 MLDEIKRVKWTPEWGEIRLHNMIADRGDWCISRQRAWGVPIPIFYCRSCNEPLVNETTIE 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKD 765
H ++ ++ G + W+ ++LL + + + K DI+D+WFDSG S S VL+
Sbjct: 482 HVASIFEKEGSNAWFLRDEKELLPAGTICPKCGHDHFRKETDIMDVWFDSGSSHSAVLET 541
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GW+ SSL+T VA+K +P++ + HGF +D +G KMSKS+G
Sbjct: 542 REELQWPADLYLEGSDQYRGWYNSSLITGVAVKGQSPYKGILSHGFTLDGEGRKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N I D Q KL G D+LR WV++
Sbjct: 602 NTI---DPNQMCNKL--------------------------GADILRLWVSS-TDFQADQ 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
I NILN + +KIR++LR+LLG L + + ++ +D + L RL +
Sbjct: 632 RISDNILNQIAESYRKIRNTLRFLLGNLSDFDPAKDRVAVEQMSELDRFALLRLHRMTDR 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y + + + + +F ++SAFY ++KDRLY + AR + L++
Sbjct: 692 VIKAYDNYDFHVVYQTVNHFCAVDMSAFYLDILKDRLYASLPSDPARRAAQTVLYDALTA 751
Query: 997 LLRTVAPIMPHLAEEVYSHLPS 1018
+ + +API+PH A+EV+ ++P
Sbjct: 752 ITKLIAPILPHTADEVWKYIPG 773
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 233/399 (58%), Gaps = 15/399 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y +E+ GKP+F+LHDGPPYANG HIGHA+NK+LKDI +R +QG YVPG
Sbjct: 34 TDIYRQVQESRKGKPKFVLHDGPPYANGDIHIGHALNKVLKDIIVRFKTMQGYDAPYVPG 93
Query: 65 WDCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WD HGLPIE +AIT+ K+ +S + R K++AL+ + QKA+F+ G+ DW+
Sbjct: 94 WDTHGLPIE-QAITNSGKVDRKKMSVPEFRDYCKDYALQWVEKQKAQFKRLGIRGDWDRP 152
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T EY Q+ F + + YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY
Sbjct: 153 -YITLLPEYEAQQIRVFGGMVTKGYIYKGLKPVYWSPSSESALAEAEIEYR-DKTSASIY 210
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ + L D +IWTTTPW++PAN I+ +P +Y + G ++A+
Sbjct: 211 VAFDVQDGKGKL---PADAAIVIWTTTPWTIPANLGISVHPDFDYVLVETGGRKFVLAQG 267
Query: 241 LVESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+E+ K TD+ V+ F G ++ + HP R ++ V+ GTG VH
Sbjct: 268 LLEAASKEIGWTDMNVLQTFKGSEIEHVLCRHPFY--DRTSLVMTGEHVTLEAGTGCVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DDF++ + VL + +QG + +A PG EGL K L E L
Sbjct: 326 APGHGEDDFVIGQKYGLGVLCPVDDQGHMTAEA-PGFEGLFYDKANKAITEKLQESGHLL 384
Query: 360 TENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ QH YP+DWRTKKPVI +A++QWF ++ + L
Sbjct: 385 KMSFIQHQYPHDWRTKKPVIFRATEQWFASVDKFRQAML 423
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ +QG + +A PG EGL K L E L ++ QH YP+DWRTKKPVI +
Sbjct: 348 VDDQGHMTAEA-PGFEGLFYDKANKAITEKLQESGHLLKMSFIQHQYPHDWRTKKPVIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF ++ + L ++ V + PE + L + IA R WCISRQR WGVPIP+FY
Sbjct: 407 ATEQWFASVDKFRQAMLDEIKRVKWTPEWGEIRLHNMIADRGDWCISRQRAWGVPIPIFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ +VNE I+H ++ ++ G + W+ ++LL
Sbjct: 467 CRSCNEPLVNETTIEHVASIFEKEGSNAWFLRDEKELL 504
>gi|418559181|ref|ZP_13123727.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
gi|371975472|gb|EHO92766.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
Length = 917
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 216/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
RD ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRDSLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP RD ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRDSLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|345021941|ref|ZP_08785554.1| isoleucyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
Length = 918
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 216/617 (35%), Positives = 321/617 (52%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SI++ ++ L G +IWTTTPW+LPAN I+ +
Sbjct: 192 SALAEAEIEYY-DKRSASIFVAFEVADGKGVLDTGDK---IIIWTTTPWTLPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P Y V +V N +VA+ L+E++ + D V+ F G+ L +T HP R+
Sbjct: 248 PDYNYVVVNVNQDNFVVAEDLLESITQELEWDTPQVIKTFKGKELDRVTAKHPFY--DRE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTGLVH AP HG+DDF ++ + VL + +G ++ +A PG EGL
Sbjct: 306 SLVMLGDHVTTDAGTGLVHTAPGHGEDDFYVSAKYNLDVLCPVDEKGVFTSEA-PGFEGL 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L N HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 365 FYDDANKVITEKLQETGALLKLNIITHSYPHDWRTKKPTIFRATAQWFASIKDFREDILN 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCT 714
++EV + P + L + + R WCISRQR WGVPIPVFY D T I+ + I H
Sbjct: 425 EIKEVKWYPAWGETRLYNMVRDREDWCISRQRAWGVPIPVFYGEDGTPIITDETINHVAD 484
Query: 715 LIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDK--- 766
L E G + W+ + LL V N N +K DI+D+WFDSG S + VL ++
Sbjct: 485 LFAEFGSNVWFEREAKDLLPEGFVSEHSPNGNFSKETDIMDVWFDSGSSHAGVLLNREDH 544
Query: 767 --PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
PA +Y+EG DQ GWF SSL T+VA+ AP++ + HGFV+D G KMSKS+GNV+
Sbjct: 545 IRPADIYLEGSDQYRGWFNSSLSTAVAVSGKAPYKTIISHGFVLDGNGRKMSKSLGNVMV 604
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ + G D+LR WVA+ V I
Sbjct: 605 PSKVQK-----------------------------QLGADILRLWVAS-VDYQADVRISD 634
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTMDTL 940
+IL + + +KIR++ R+LL L + + T ++ VD YML RL +
Sbjct: 635 DILKQTSEAYRKIRNTFRFLLANLADFNPETDRVAERDLEEVDRYMLHRLQILVQDVRES 694
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y +++++ + NF ++LS+FY KD LY ++ + R S + I L++
Sbjct: 695 YEKYEFSPIFHRIHNFCADDLSSFYLDFAKDILYIEAADHHRRRSIQTGYYEILTTLVQL 754
Query: 1001 VAPIMPHLAEEVYSHLP 1017
+ PI+PH A+EV+ ++P
Sbjct: 755 LTPIIPHTADEVWEYIP 771
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 229/399 (57%), Gaps = 15/399 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ LY E G+P FILHDGPPYANG HIGHA+NK+LKD R + G Y+PG
Sbjct: 34 ANLYEKTLERTKGRPLFILHDGPPYANGDIHIGHALNKVLKDFITRYKSMTGFHAPYIPG 93
Query: 65 WDCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WD HGLPIE A+T K+ +S + RK + +AL ++ Q+ +F+ GV ADW +N
Sbjct: 94 WDTHGLPIE-SALTKNKKVDRKKMSVAEFRKLCEEYALTQVDGQRKQFKQLGVRADW-NN 151
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T K+Y Q+ F + KQ YIY+ LKPVYWSPSS +ALAE+E+EY D S SI+
Sbjct: 152 PYITLTKDYEAAQIRVFGEMAKQGYIYKGLKPVYWSPSSESALAEAEIEYY-DKRSASIF 210
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
+ ++ L G +IWTTTPW+LPAN I+ +P Y V +V N +VA+
Sbjct: 211 VAFEVADGKGVLDTGDK---IIIWTTTPWTLPANLGISVHPDYNYVVVNVNQDNFVVAED 267
Query: 241 LVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ES+ + D +V+ F G+ L +T HP R+ ++ V++ GTGLVH
Sbjct: 268 LLESITQELEWDTPQVIKTFKGKELDRVTAKHPFY--DRESLVMLGDHVTTDAGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DDF ++ + VL + +G ++ +A PG EGL K L E L
Sbjct: 326 APGHGEDDFYVSAKYNLDVLCPVDEKGVFTSEA-PGFEGLFYDDANKVITEKLQETGALL 384
Query: 360 TEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 385 KLNIITHSYPHDWRTKKPTIFRATAQWFASIKDFREDIL 423
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ +G ++ +A PG EGL K L E L N HSYP+DWRTKKP I +
Sbjct: 348 VDEKGVFTSEA-PGFEGLFYDDANKVITEKLQETGALLKLNIITHSYPHDWRTKKPTIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF + + + L ++ V + P + L + + R WCISRQR WGVPIPVFY
Sbjct: 407 ATAQWFASIKDFREDILNEIKEVKWYPAWGETRLYNMVRDREDWCISRQRAWGVPIPVFY 466
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ + I H L E G + W+ + LL
Sbjct: 467 GEDGTPIITDETINHVADLFAEFGSNVWFEREAKDLL 503
>gi|335357087|ref|ZP_08548957.1| isoleucyl-tRNA synthetase [Lactobacillus animalis KCTC 3501]
Length = 931
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/620 (33%), Positives = 328/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S + ++ L E D + ++WTTTPW++PA++ I +
Sbjct: 191 SALAEAEVEYH-DVTSPSAFYAERVLDGKGVLDE---DTYMVVWTTTPWTIPASEGITID 246
Query: 478 PALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
+ +Y+V G V+ A + +N + D+ + GQ L+ IT HP E
Sbjct: 247 ASFDYAVVQPAGEERKFVMAADLIQKNAELFGWEDVKTLKVVKGQDLEYITAQHPFY-ED 305
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R+L ++ FV++ GTGLVH AP +G DD+ + + + + +++ G + + GP +
Sbjct: 306 RELLVMLGDFVTTESGTGLVHTAPGYGDDDYKMGMKYGLEIFAPVSDTGHLTAECGPEFD 365
Query: 595 GLNILGDGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ D + L+ L E ++L E +Y+HSYP+DWRTKKP+I +A+ QWF ++I+
Sbjct: 366 GV-FYEDANEVALNKLREANLLLKEMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRDN 424
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L + EVNF+PE +K L + I R W ISRQRVWGVP+P+FY D T I+ + I+H
Sbjct: 425 ILNAINEVNFLPEWGQKRLYNMIRDRGDWVISRQRVWGVPLPIFYAEDGTTIMEKETIEH 484
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L++EHG + W+ L + LL N N TK DI+D+WFDSG S V +
Sbjct: 485 VAKLVEEHGSNIWFKLDAKDLLPEGYTNEHSPNGKFTKETDIMDVWFDSGSSHQGVCAQR 544
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSL+TSVA+ AP++ + GF +D +G KMSKS+GN
Sbjct: 545 DYLTYPADLYLEGSDQYRGWFNSSLITSVAVSGHAPYKQILSQGFTLDAEGRKMSKSLGN 604
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDPTV 880
I ++ KK+ G +++R WV + S D V
Sbjct: 605 TIVPEEVI---KKM--------------------------GAEIIRLWVLSVDTSAD--V 633
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ + +K R+++R+LL + + +I +D YML + +F
Sbjct: 634 RVSMESFAQISESYRKFRNTMRFLLANTTDFDPAKDTIPFDELEAIDQYMLILVNKFTKE 693
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y + + + ++NFV ELSAFY + KD +Y ++ + + R S L+
Sbjct: 694 ILDDYANYNFMDIYKKVINFVTTELSAFYLAVAKDVVYIEAKDAKKRRSMQTVLYETVVR 753
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L + + P+MPH EE+++ +
Sbjct: 754 LAKLMTPVMPHTTEEIWNFV 773
Score = 285 bits (728), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 236/395 (59%), Gaps = 15/395 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ LN GKP F+LHDGPPYANG H+GHA+NKI KDI +R+ + G R YVPGWD HG
Sbjct: 39 KRQKLNEGKPTFVLHDGPPYANGNIHMGHAMNKISKDIIIRAKSMMGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE LK K LS D R+K + +ALE ++ Q+ +F+ GV +W+ N Y T D
Sbjct: 99 LPIEQQLKKAGVDRKALSVADFREKCREYALEQVDKQRTDFKRLGVAGEWD-NPYVTLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY Q+ F + + D IY+ +PVYWS SS +ALAE+E+EY D S S + ++
Sbjct: 158 EYEAQQIRVFGKMAENDLIYKGKRPVYWSWSSESALAEAEVEYH-DVTSPSAFYAERVLD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCLVES 244
L E D + ++WTTTPW++PA++ I + + +Y+V G V+ A + ++
Sbjct: 217 GKGVLDE---DTYMVVWTTTPWTIPASEGITIDASFDYAVVQPAGEERKFVMAADLIQKN 273
Query: 245 LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
+ D++ + GQ L+ IT HP E R+L ++ FV++ GTGLVH AP +G
Sbjct: 274 AELFGWEDVKTLKVVKGQDLEYITAQHPFY-EDRELLVMLGDFVTTESGTGLVHTAPGYG 332
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDVLWTE-N 362
DD+ + + + + +++ G + + GP +G+ D + L+ L E ++L E +
Sbjct: 333 DDDYKMGMKYGLEIFAPVSDTGHLTAECGPEFDGV-FYEDANEVALNKLREANLLLKEMD 391
Query: 363 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y+HSYP+DWRTKKP+I +A+ QWF ++I+ L
Sbjct: 392 YEHSYPFDWRTKKPIIFRATPQWFASVDKIRDNIL 426
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 1167
+++ G + + GP +G+ + + L E ++L E +Y+HSYP+DWRTKKP+I +
Sbjct: 350 VSDTGHLTAECGPEFDGVFYEDANEVALNKLREANLLLKEMDYEHSYPFDWRTKKPIIFR 409
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++I+ L + VNF+PE +K L + I R W ISRQRVWGVP+P+FY
Sbjct: 410 ATPQWFASVDKIRDNILNAINEVNFLPEWGQKRLYNMIRDRGDWVISRQRVWGVPLPIFY 469
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ + I+H L++EHG + W+ L + LL
Sbjct: 470 AEDGTTIMEKETIEHVAKLVEEHGSNIWFKLDAKDLL 506
>gi|347727024|gb|AEP19870.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. 11-28]
Length = 908
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 221/621 (35%), Positives = 322/621 (51%), Gaps = 56/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S +IY+ ++ V + TD H +IWTTTPW++PAN IA +
Sbjct: 191 SALAEAEIEYY-DKKSPAIYVAFQV--VDGKDVLATTD-HFVIWTTTPWTIPANLGIAVS 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
L Y+ G IVA+ LVE++ TD V + G+ + +T HP+
Sbjct: 247 DELTYTRIEHDGKGYIVAETLVEDVTTALGWTDYTVSGSWNGREFEHMTAQHPLYDRT-- 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
L+ G ++ TGLVH AP HG+DD+ + A + VL + ++G Y + PG EGL
Sbjct: 305 -SLVMIGDHVTADATGLVHTAPGHGEDDYRVGQAYGLDVLCPVDDRG-YMTEEAPGFEGL 362
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K + L E L + +HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 363 FYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRDDMLR 422
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
++EVN+VPE L + + R W ISRQR WGVPIP+FY DG II NE I H
Sbjct: 423 EIKEVNWVPEWGMTRLYNMVRDRGDWVISRQRAWGVPIPIFYAEDGTEIITNE-TIDHIA 481
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L EHG + W+ + LL + + N K DI+D+WFDSG S + VL+ +
Sbjct: 482 NLFHEHGSNVWYEREAKDLLPEGFTHPNSPNGEFRKELDIMDVWFDSGSSHAGVLEQRDN 541
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T+VA AP+RNV HGFV+D G KMSKS+GN I
Sbjct: 542 LRRPADLYLEGSDQYRGWFNSSLSTAVATTGKAPYRNVLSHGFVLDGDGRKMSKSLGNTI 601
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ +D+ + YG +++R WV++ V
Sbjct: 602 APNDLVK-----------------------------QYGAEIVRLWVSS-VDYQSDVRAS 631
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYV---DVYMLKRLCEFQNTMDTL 940
+ + +KIR++LR+LLG L+ S + D +M +L + Q +
Sbjct: 632 HDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFEDMPEADRFMATKLKQLQTKVVKA 691
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y F + + NF VNELS+FY KD LY + + R + +++ L +
Sbjct: 692 YDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIEREDDARRRAVQTVMYDTVVTLTKL 751
Query: 1001 VAPIMPHLAEEVYSHLPSRQG 1021
+API+PH A+EV+ +P++Q
Sbjct: 752 LAPILPHTADEVWQEVPAKQA 772
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 233/399 (58%), Gaps = 19/399 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+ +E GKP++ILHDGPPYANG H+GHA+NK+LKDI +R L G + +PGW
Sbjct: 35 DLYNRVQEKNAGKPQYILHDGPPYANGDIHMGHALNKVLKDIIVRFKSLNGYQSPMIPGW 94
Query: 66 DCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE L+ K ++ + R+K +A+E +N+Q+ +F+ G+LAD++ N Y
Sbjct: 95 DTHGLPIENALQKAGVNRKEMTVAEFREKCAAYAMEQVNSQREQFKRLGLLADFD-NPYI 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY Q+ F + ++ YIY+ KPVYWSPSS +ALAE+E+EY D S +IY+
Sbjct: 154 TLLPEYEAAQIRLFGTMAEKGYIYKGKKPVYWSPSSESALAEAEIEYY-DKKSPAIYVAF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
++ V + TD H +IWTTTPW++PAN IA + L Y+ G IVA+ LVE
Sbjct: 213 QV--VDGKDVLATTD-HFVIWTTTPWTIPANLGIAVSDELTYTRIEHDGKGYIVAETLVE 269
Query: 244 ----SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
+L W TD V + G+ + +T HP+ L+ G ++ TGLVH
Sbjct: 270 DVTTALGW---TDYTVSGSWNGREFEHMTAQHPLYDRT---SLVMIGDHVTADATGLVHT 323
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DD+ + A + VL + ++G Y + PG EGL K + L E L
Sbjct: 324 APGHGEDDYRVGQAYGLDVLCPVDDRG-YMTEEAPGFEGLFYEDANKQIGMKLEENGYLL 382
Query: 360 TENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 383 NLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRDDML 421
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 1115 YSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWF 1173
Y + PG EGL K + L E L + +HSYP+DWRTKKPVI +A+ QWF
Sbjct: 351 YMTEEAPGFEGLFYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVIFRATPQWF 410
Query: 1174 IDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDT 1231
+ + + L ++ VN+VPE L + + R W ISRQR WGVPIP+FY DG
Sbjct: 411 ASIKDFRDDMLREIKEVNWVPEWGMTRLYNMVRDRGDWVISRQRAWGVPIPIFYAEDGTE 470
Query: 1232 IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
II NE I H L EHG + W+ + LL
Sbjct: 471 IITNE-TIDHIANLFHEHGSNVWYEREAKDLL 501
>gi|312880110|ref|ZP_07739910.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783401|gb|EFQ23799.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 931
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 218/621 (35%), Positives = 328/621 (52%), Gaps = 56/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAF 476
TALA +E+EY+ D S SIY+ L +V E +IWTTTPW+LPA+ +A
Sbjct: 194 TALAAAEIEYE-DESSPSIYVAYPLPEVEKRFPELAGRACSVVIWTTTPWTLPASLAVAL 252
Query: 477 NPALEYSVASV-KGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
+P Y+ S +G ++A L E K + + + G+ L+ + +HP +E+
Sbjct: 253 HPGYRYAFFSAPEGKAFLMATELKEAFEKACGLSLEEELLSLTGRDLEGVEALHPFYEER 312
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R + L+ A +V GTG VH AP HG +DF + + +LN + ++G + PD P +
Sbjct: 313 R-VPLVLADYVVLDSGTGCVHTAPGHGVEDFETGVRYGLEILNPVDDRGVFLPDT-PLVG 370
Query: 595 GLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
GL+ L DG VL + +L HSYP+ WR KKPVI +A+ QWF+ ++ + +
Sbjct: 371 GLS-LDDGAAVVLKTLSDSGRLLGRGKILHSYPHCWRCKKPVIFRATAQWFVSVQQFRDQ 429
Query: 653 ALACLEE-VNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
AL +EE V +VP + + + + R WCISRQRVWGVPIP FY D ++++ I
Sbjct: 430 ALKAIEEQVQWVPVWGQDRIGNMVRDRSDWCISRQRVWGVPIPAFYCRDCGKLVLDPEKI 489
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLK 764
+ + E G D WW S E LL V + N+ K DI+D+WFDSG+S VL+
Sbjct: 490 RRVAKRVKEQGSDIWWQESPEALLGDLAVCPHCASRNLRKDTDIMDVWFDSGVSHLAVLE 549
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF +SLLTSVA + +APFR V HGF+VD +G KMSKS+
Sbjct: 550 TRPELSWPADLYLEGSDQHRGWFQTSLLTSVATRGSAPFRTVLTHGFIVDGEGRKMSKSL 609
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV ++ + YG D+LR WVA+ +
Sbjct: 610 GNVTRPQEV-----------------------------IDRYGADILRLWVASTDYRG-D 639
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I + IL + + ++IR++ R+LLG L +SR +D+++L RL +
Sbjct: 640 VRISETILKNLVETYRRIRNTARFLLGNLEGFDPQKHRVSRGDMEPLDLWLLARLQDLVE 699
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y ++++ S + F NE+S+F+ + KDRLY D G +R S L
Sbjct: 700 RVTKGYEDYEFHVPSFLTHQFCDNEMSSFFLDVSKDRLYADQKGGLSRRSAQTVLWETLT 759
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L R +AP++ AEE++ +L
Sbjct: 760 TLCRLLAPVLSFTAEEIWQNL 780
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 228/399 (57%), Gaps = 13/399 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y Q++ G P F+LHDGPPYAN HIG A NKILKD + ++G R YVPGWD
Sbjct: 38 IYQKQQDQREGSPTFVLHDGPPYANANIHIGTAFNKILKDFIPKYKAMRGFRAPYVPGWD 97
Query: 67 CHGLPIELKAITSK--DK-LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIELK + + DK + P+++R++ ++A + I+ Q+ EF GVL DWE N Y
Sbjct: 98 THGLPIELKVLKEQGLDKDNVDPVELRRRCTSYAHQFIDIQREEFRRLGVLGDWE-NPYL 156
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T EY QL F ++ ++ +Y+ KPV+W +TALA +E+EY+ D S SIY+
Sbjct: 157 TLRPEYEAAQLGAFADMVEKGLVYKGQKPVFWCTDCQTALAAAEIEYE-DESSPSIYVAY 215
Query: 184 KLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV-KGANVIVAKCL 241
L +V E +IWTTTPW+LPA+ +A +P Y+ S +G ++A L
Sbjct: 216 PLPEVEKRFPELAGRACSVVIWTTTPWTLPASLAVALHPGYRYAFFSAPEGKAFLMATEL 275
Query: 242 VESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
E+ K + E + G+ L+ + +HP +E+R + L+ A +V GTG VH A
Sbjct: 276 KEAFEKACGLSLEEELLSLTGRDLEGVEALHPFYEERR-VPLVLADYVVLDSGTGCVHTA 334
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VL 358
P HG +DF + + +LN + ++G + PD P + GL+ L DG VL + +L
Sbjct: 335 PGHGVEDFETGVRYGLEILNPVDDRGVFLPDT-PLVGGLS-LDDGAAVVLKTLSDSGRLL 392
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+ WR KKPVI +A+ QWF+ ++ + +AL
Sbjct: 393 GRGKILHSYPHCWRCKKPVIFRATAQWFVSVQQFRDQAL 431
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
LN + ++G + PD P + GL+ L +G VL + +L HSYP+ WR KKP
Sbjct: 353 LNPVDDRGVFLPDT-PLVGGLS-LDDGAAVVLKTLSDSGRLLGRGKILHSYPHCWRCKKP 410
Query: 1164 VILKASQQWFIDTERIKPEALACLE-GVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
VI +A+ QWF+ ++ + +AL +E V +VP + + + + R WCISRQRVWGVP
Sbjct: 411 VIFRATAQWFVSVQQFRDQALKAIEEQVQWVPVWGQDRIGNMVRDRSDWCISRQRVWGVP 470
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTKSN 1276
IP FY D ++++ I+ + E G D WW E LL V + N
Sbjct: 471 IPAFYCRDCGKLVLDPEKIRRVAKRVKEQGSDIWWQESPEALLGDLAVCPHCASRN 526
>gi|121535254|ref|ZP_01667068.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
gi|121306139|gb|EAX47067.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
Length = 930
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 210/628 (33%), Positives = 325/628 (51%), Gaps = 54/628 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT--DLHALIWTTTPWSLPANQFIA 475
TALAE+E+EY + S +IY+K L L G ++A+IWTTTPW++PAN IA
Sbjct: 192 TALAEAEIEYA-EKKSHAIYVKFPLIDDKGSLPVGIKHEGVYAVIWTTTPWTIPANVAIA 250
Query: 476 FNPALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
NP EY+ V ++A L++ + K D ++ G+ L+ + + HP
Sbjct: 251 VNPEFEYAWVQVNNEIYLLASGLIDAVVKANGLGDYTILATVKGEALEGMVFGHPFL--D 308
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R+ ++ V+ +GTG VH AP HGQ+DF + + +PV+N + + G+++ + G
Sbjct: 309 RESVVVLGDHVTLEQGTGCVHTAPGHGQEDFEIGMKYNLPVINPVDHSGRFTAEGGK-FA 367
Query: 595 GLNILGDGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ + + L E ++L + +H Y + WR K P+I +A++QWF E + A
Sbjct: 368 GMLVHDANVPIIKELAERNMLLGKGTIRHQYAHCWRCKNPIIYRATEQWFASVEGFRQMA 427
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L ++EV +VP ++ + + +A R WCISRQRVWGVPIP+FY + IVN+ I
Sbjct: 428 LEAIKEVEWVPSWGEERIHNMVADRQDWCISRQRVWGVPIPIFYCNQCNEHIVNDTTISV 487
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDK 766
L G D WW+ S ++L + K DI+D+WFDSG S + VL+++
Sbjct: 488 VAELFRREGSDAWWAKSAAEILPQGFACPHCGHGTFRKETDIMDVWFDSGSSHAAVLEER 547
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y+EG DQ GWF SSLLT+VA + AP++ V HGFVVD +G KMSKS+GN
Sbjct: 548 PELHWPADMYLEGSDQHRGWFQSSLLTAVASRGRAPYKTVLTHGFVVDGEGRKMSKSIGN 607
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI ++ + YG D+LR WVA+ A +
Sbjct: 608 VIYPQEV-----------------------------IKQYGADILRLWVAS-ADYKADIR 637
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I +IL + +KIR++ RYL+G L + + +D + L RL + +
Sbjct: 638 ISNDILKQMAEVYRKIRNTFRYLIGNLADFDPDRDCVGYDQLTELDRWALLRLERVRERV 697
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+++ + NF +LSA Y ++KDRLY + R + ++ I L
Sbjct: 698 TKAYDEYEFHLLYHTVHNFCAVDLSAIYLDILKDRLYTAVPHAIERRAAQTAMYEILQTL 757
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSS 1025
+ +API+ AEEV+ ++P R G S
Sbjct: 758 VVMLAPILTFTAEEVWQYMPKRAGMPES 785
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 229/400 (57%), Gaps = 12/400 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y + GKP+F+LHDGPPYANG HIG A+NKILKDI ++ L+G YVPG
Sbjct: 34 NRIYEKKISKAKGKPKFVLHDGPPYANGNIHIGTALNKILKDIIVKYKSLRGYDAPYVPG 93
Query: 65 WDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE +K + L+PLD+R++ K +AL+ ++ Q+ +F+ GV DW+ N
Sbjct: 94 WDTHGLPIEHAAIKILGLNRHELNPLDLRRQCKEYALKCLDMQREDFKRLGVSGDWD-NP 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY Q+ F + K+ YIY+ LK VYW S TALAE+E+EY + S +IY+
Sbjct: 153 YITLTPEYEAKQIEVFGEMAKKGYIYKGLKSVYWCTSCETALAEAEIEYA-EKKSHAIYV 211
Query: 182 KIKLNQVPAHLLEGAT--DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
K L L G ++A+IWTTTPW++PAN IA NP EY+ V ++A
Sbjct: 212 KFPLIDDKGSLPVGIKHEGVYAVIWTTTPWTIPANVAIAVNPEFEYAWVQVNNEIYLLAS 271
Query: 240 CLVES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
L+++ +K D ++ G+ L+ + + HP R+ ++ V+ +GTG VH
Sbjct: 272 GLIDAVVKANGLGDYTILATVKGEALEGMVFGHPFL--DRESVVVLGDHVTLEQGTGCVH 329
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HGQ+DF + + +PV+N + + G+++ + G G+ + + L E ++L
Sbjct: 330 TAPGHGQEDFEIGMKYNLPVINPVDHSGRFTAEGGK-FAGMLVHDANVPIIKELAERNML 388
Query: 359 WTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +H Y + WR K P+I +A++QWF E + AL
Sbjct: 389 LGKGTIRHQYAHCWRCKNPIIYRATEQWFASVEGFRQMAL 428
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPV 1164
+N + + G+++ + G G+ + + L E ++L + +H Y + WR K P+
Sbjct: 350 INPVDHSGRFTAEGGK-FAGMLVHDANVPIIKELAERNMLLGKGTIRHQYAHCWRCKNPI 408
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A++QWF E + AL ++ V +VP ++ + + +A R WCISRQRVWGVPIP
Sbjct: 409 IYRATEQWFASVEGFRQMALEAIKEVEWVPSWGEERIHNMVADRQDWCISRQRVWGVPIP 468
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY + IVN+ I L G D WW+ ++L
Sbjct: 469 IFYCNQCNEHIVNDTTISVVAELFRREGSDAWWAKSAAEIL 509
>gi|116629831|ref|YP_815003.1| isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
gi|116095413|gb|ABJ60565.1| Isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
Length = 944
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 322/625 (51%), Gaps = 65/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 202 STLAEAEVEYH-DIKSPRIYVAFPIEDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 257
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y V V G ++ + E+L W D V+ G +TY HP+ +
Sbjct: 258 PKFDYVVVEVNGKKYVIGADRLSAVAEDLGWK---DYKVLKTLKGTDFDRMTYRHPLYGK 314
Query: 534 ----QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
Q L ++ +V+ GTGLVH A G+DD+ + + V + QG+++ +
Sbjct: 315 TGLGQYGL-VMNDTYVTDDDGTGLVHNATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEV 373
Query: 590 -GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 374 PDPDLVGM-FYDDANKVVTDKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASV 432
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVN 705
++ + + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 433 DKFRDQILAEIEKANFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVT 492
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWS 760
I+H + ++ G + W++ + ++LL + N K DILD+WFDSG SW+
Sbjct: 493 PETIEHVAQIFEKEGSNAWYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWA 552
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V+K++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KM
Sbjct: 553 GVMKERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKM 612
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNVIS +D+ + G +++R WVA A
Sbjct: 613 SKSLGNVISPNDV-----------------------------IKQMGAEIIRLWVAG-AD 642
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
V + ++IL S + +KIR+++R++L + SI+ VD YM +L
Sbjct: 643 TTSDVAVSQDILRQSAESYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYMEIKLN 702
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
Y +F + + + +F+ N+LSAFY KD LY D + E R S ++
Sbjct: 703 RLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDVLYIDPEDSETRRSMQTVIY 762
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
++ L + + PI+PH EEV+ +L
Sbjct: 763 DVLVKLTKLMTPILPHTMEEVWGYL 787
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 219/417 (52%), Gaps = 24/417 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 50 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 109
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA+E + Q A+F+ GV+ADW+H Y T
Sbjct: 110 LPVEQQLAKKGVDRKSMDRAKYRELCRQFAVEQVKKQMADFKRLGVMADWDH-PYITLQP 168
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 169 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIED 227
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +Y V V G ++ + E
Sbjct: 228 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYVVVEVNGKKYVIGADRLSAVAE 284
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE----QRDLKLLPAGFVSSSKGTGLVHC 299
L W D +V+ G +TY HP+ + Q L ++ +V+ GTGLVH
Sbjct: 285 DLGW---KDYKVLKTLKGTDFDRMTYRHPLYGKTGLGQYGL-VMNDTYVTDDDGTGLVHN 340
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--D 356
A G+DD+ + + V + QG+++ + P L G+ D V +E
Sbjct: 341 ATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEVPDPDLVGM-FYDDANKVVTDKLEKAGA 399
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+L + HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 400 LLKLSFFTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKANFIPSWGKTR 456
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 406 FTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKANFIPSWGKTRLYNMIKDRG 465
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ ++LL
Sbjct: 466 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTHTAKELL 520
>gi|282851660|ref|ZP_06261025.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
gi|420148403|ref|ZP_14655671.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactobacillus
gasseri CECT 5714]
gi|282557628|gb|EFB63225.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
gi|398399955|gb|EJN53551.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactobacillus
gasseri CECT 5714]
Length = 933
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 322/625 (51%), Gaps = 65/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIEDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y V V G ++ + E+L W D V+ G +TY HP+ +
Sbjct: 247 PKFDYVVVEVNGKKYVIGADRLSAVAEDLGWK---DYKVLKTLKGTDFDRMTYRHPLYGK 303
Query: 534 ----QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
Q L ++ +V+ GTGLVH A G+DD+ + + V + QG+++ +
Sbjct: 304 TGLGQYGL-VMNDTYVTDDDGTGLVHNATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEV 362
Query: 590 -GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 363 PDPDLVGM-FYDDANKVVTDKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASV 421
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVN 705
++ + + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 422 DKFRDQILAEIEKANFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVT 481
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWS 760
I+H + ++ G + W++ + ++LL + N K DILD+WFDSG SW+
Sbjct: 482 PETIEHVAQIFEKEGSNAWYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWA 541
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V+K++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KM
Sbjct: 542 GVMKERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKM 601
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNVIS +D+ + G +++R WVA A
Sbjct: 602 SKSLGNVISPNDV-----------------------------IKQMGAEIIRLWVAG-AD 631
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
V + ++IL S + +KIR+++R++L + SI+ VD YM +L
Sbjct: 632 TTSDVAVSQDILRQSAESYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYMEIKLN 691
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
Y +F + + + +F+ N+LSAFY KD LY D + E R S ++
Sbjct: 692 RLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDVLYIDPEDSETRRSMQTVIY 751
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
++ L + + PI+PH EEV+ +L
Sbjct: 752 DVLVKLTKLMTPILPHTMEEVWGYL 776
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 219/417 (52%), Gaps = 24/417 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA+E + Q A+F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKSMDRAKYRELCRQFAVEQVKKQMADFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 158 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIED 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +Y V V G ++ + E
Sbjct: 217 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYVVVEVNGKKYVIGADRLSAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE----QRDLKLLPAGFVSSSKGTGLVHC 299
L W D +V+ G +TY HP+ + Q L ++ +V+ GTGLVH
Sbjct: 274 DLGW---KDYKVLKTLKGTDFDRMTYRHPLYGKTGLGQYGL-VMNDTYVTDDDGTGLVHN 329
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--D 356
A G+DD+ + + V + QG+++ + P L G+ D V +E
Sbjct: 330 ATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEVPDPDLVGM-FYDDANKVVTDKLEKAGA 388
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+L + HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 389 LLKLSFFTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKANFIPSWGKTR 445
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 395 FTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKANFIPSWGKTRLYNMIKDRG 454
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ ++LL
Sbjct: 455 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTHTAKELL 509
>gi|311110527|ref|ZP_07711924.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
gi|311065681|gb|EFQ46021.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
Length = 930
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 322/625 (51%), Gaps = 65/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIEDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y V V G ++ + E+L W D V+ G +TY HP+ +
Sbjct: 247 PKFDYVVVEVNGKKYVIGADRLSAVAEDLGWK---DYKVLKTLKGTDFDRMTYRHPLYGK 303
Query: 534 ----QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
Q L ++ +V+ GTGLVH A G+DD+ + + V + QG+++ +
Sbjct: 304 TGLGQYGL-VMNDTYVTDDDGTGLVHNATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEV 362
Query: 590 -GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 363 PDPDLVGM-FYDDANKVVTDKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASV 421
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVN 705
++ + + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 422 DKFRDQILAEIEKANFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVT 481
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWS 760
I+H + ++ G + W++ + ++LL + N K DILD+WFDSG SW+
Sbjct: 482 PETIEHVAQIFEKEGSNAWYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWA 541
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V+K++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KM
Sbjct: 542 GVMKERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKM 601
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNVIS +D+ + G +++R WVA A
Sbjct: 602 SKSLGNVISPNDV-----------------------------IKQMGAEIIRLWVAG-AD 631
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
V + ++IL S + +KIR+++R++L + SI+ VD YM +L
Sbjct: 632 TTSDVAVSQDILRQSAESYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYMEIKLN 691
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
Y +F + + + +F+ N+LSAFY KD LY D + E R S ++
Sbjct: 692 RLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDVLYIDPEDSETRRSMQTVIY 751
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
++ L + + PI+PH EEV+ +L
Sbjct: 752 DVLVKLTKLMTPILPHTMEEVWGYL 776
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 219/417 (52%), Gaps = 24/417 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA+E + Q A+F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKSMDRAKYRELCRQFAVEQVKKQMADFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 158 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIED 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +Y V V G ++ + E
Sbjct: 217 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYVVVEVNGKKYVIGADRLSAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE----QRDLKLLPAGFVSSSKGTGLVHC 299
L W D +V+ G +TY HP+ + Q L ++ +V+ GTGLVH
Sbjct: 274 DLGW---KDYKVLKTLKGTDFDRMTYRHPLYGKTGLGQYGL-VMNDTYVTDDDGTGLVHN 329
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--D 356
A G+DD+ + + V + QG+++ + P L G+ D V +E
Sbjct: 330 ATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEVPDPDLVGM-FYDDANKVVTDKLEKAGA 388
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+L + HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 389 LLKLSFFTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKANFIPSWGKTR 445
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 395 FTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKANFIPSWGKTRLYNMIKDRG 454
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ ++LL
Sbjct: 455 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTHTAKELL 509
>gi|114777695|ref|ZP_01452655.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans PV-1]
gi|114551911|gb|EAU54445.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans PV-1]
Length = 936
Score = 347 bits (890), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 216/637 (33%), Positives = 323/637 (50%), Gaps = 73/637 (11%)
Query: 417 GTALAESELEYKPDHISKSIYLKIK----LNQVPAHLLEGATDLHALIWTTTPWSLPANQ 472
TALAE+E+EY+ DH S SIY+K L+ + A L + D+ +IWTTTPW++PAN
Sbjct: 211 ATALAEAEVEYE-DHTSHSIYVKFAAGEDLSDIDAAL---SGDVSIVIWTTTPWTIPANL 266
Query: 473 FIAFNPALEYSVASVK----------GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQ 522
++ PA+EYS + G +I+A+ L + + +V+ F G L
Sbjct: 267 AVSVGPAIEYSAVRITDSGDNTNLKVGEILILAEDLRAGVLSAIGAEGEVIARFNGGKLD 326
Query: 523 DITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
+ HP ++D +L G V+ GTG VH AP HGQ+D+ + L +P N + +
Sbjct: 327 RRRFRHPY--LEQDAPVLVGGHVTLEAGTGAVHTAPGHGQEDYEIGLKYGLPAFNPVGST 384
Query: 583 GKYSPDAG-PGLEGLNILGDGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQ 640
G + DAG P +EG ++ V HL+ L T +HSYP+ WR KP+I +A+
Sbjct: 385 GLF--DAGTPVVEGRHVYQANAIMVEHLLSCGALLETSEIKHSYPHCWRCHKPLIFRATP 442
Query: 641 QWFI--DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD 698
QWFI +T ++ +ALA + E + PE + +R + QRP WC+SRQR WGVPI
Sbjct: 443 QWFISMETNNLRDKALAAISETTWTPEWGENRIRAMVEQRPDWCVSRQRNWGVPITAIRC 502
Query: 699 ---GDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL----NTSDVNSNV-TKSNDILD 750
G + A ++ ++ G D W++ L D N + DILD
Sbjct: 503 EACGSHKVTTPAVVEGIAKAVELGGADIWFAHDAAHFLPDGATCPDCGGNAFARETDILD 562
Query: 751 IWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHG 805
+WFDSG + + VL+ + PA +Y+EG DQ GWF SSLL SV + APF+ V HG
Sbjct: 563 VWFDSGSTHACVLEQREELTSPADLYLEGSDQHRGWFQSSLLESVGTRGRAPFKGVLTHG 622
Query: 806 FVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDV 865
FVVD+ G KMSKS GNVI+ I Q G D+
Sbjct: 623 FVVDKNGNKMSKSKGNVIAPQKIIQ-----------------------------QMGADI 653
Query: 866 LRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN----HSESTGSISRY 921
LR W+A+ + + I +I+ + ++IR+++R+LLG L H S
Sbjct: 654 LRLWIAS-SDYSADIRISDDIIKQLSEAYRRIRNTIRFLLGNLDGFDPAHDAVALSERTP 712
Query: 922 VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGE 981
+D +++ RL + + +Q+ R + + NF +L FY ++KDRLYCD +
Sbjct: 713 LDQWVMHRLSRLERHVHACNESYQFHRIHQEIHNFCSVDLGGFYLDMIKDRLYCDGADSA 772
Query: 982 ARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
R S TL+++ L R +AP++P AEE + HLP
Sbjct: 773 RRRSARATLYDLADTLTRLIAPLLPFTAEEAWDHLPG 809
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 226/407 (55%), Gaps = 31/407 (7%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y REA P+FILHDGPPYANG+ HIGHA+NK+LKDI +RS + G YVPGW
Sbjct: 52 DIYGQLREARKDAPKFILHDGPPYANGSIHIGHALNKVLKDIVIRSRSMLGFDAPYVPGW 111
Query: 66 DCHGLPIELKAITSKDKL------LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
DCHGLPIELK K +S + R +++A I+ Q+ EF+ GV+ DW+H
Sbjct: 112 DCHGLPIELKVEEQFKKKKQKKEDISDAEFRSACRDYAKGQIDVQREEFKRLGVIGDWDH 171
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
Y T D + N + + + +++ KPV+W S TALAE+E+EY+ DH S SI
Sbjct: 172 P-YVTMDYRFEANTVREIGRFLENGGLFKGAKPVHWCVSCATALAEAEVEYE-DHTSHSI 229
Query: 180 YLKIK----LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK---- 231
Y+K L+ + A L + D+ +IWTTTPW++PAN ++ PA+EYS +
Sbjct: 230 YVKFAAGEDLSDIDAAL---SGDVSIVIWTTTPWTIPANLAVSVGPAIEYSAVRITDSGD 286
Query: 232 ------GANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPA 285
G +I+A+ L + + EV+ F G L + HP ++D +L
Sbjct: 287 NTNLKVGEILILAEDLRAGVLSAIGAEGEVIARFNGGKLDRRRFRHPY--LEQDAPVLVG 344
Query: 286 GFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG-PGLEGLNILGD 344
G V+ GTG VH AP HGQ+D+ + L +P N + + G + DAG P +EG ++
Sbjct: 345 GHVTLEAGTGAVHTAPGHGQEDYEIGLKYGLPAFNPVGSTGLF--DAGTPVVEGRHVYQA 402
Query: 345 GKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTE 390
V HL+ L T +HSYP+ WR KP+I +A+ QWFI E
Sbjct: 403 NAIMVEHLLSCGALLETSEIKHSYPHCWRCHKPLIFRATPQWFISME 449
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 9/165 (5%)
Query: 1106 LNLITNQGKYSPDAG-PGLEGLNILGEGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKP 1163
N + + G + DAG P +EG ++ V HL+ L T +HSYP+ WR KP
Sbjct: 378 FNPVGSTGLF--DAGTPVVEGRHVYQANAIMVEHLLSCGALLETSEIKHSYPHCWRCHKP 435
Query: 1164 VILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGV 1221
+I +A+ QWFI +T ++ +ALA + + PE + +R + QRP WC+SRQR WGV
Sbjct: 436 LIFRATPQWFISMETNNLRDKALAAISETTWTPEWGENRIRAMVEQRPDWCVSRQRNWGV 495
Query: 1222 PIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PI G + A ++ ++ G D W++ L
Sbjct: 496 PITAIRCEACGSHKVTTPAVVEGIAKAVELGGADIWFAHDAAHFL 540
>gi|325288845|ref|YP_004265026.1| isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324964246|gb|ADY55025.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 924
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 325/617 (52%), Gaps = 52/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E++Y D S +I++K + + L G + +IWTTTPW+LPAN I+ +
Sbjct: 192 TALAEAEIDY-ADKKSTAIFVKFPVKEDQGLL--GKDNTSVVIWTTTPWTLPANLAISVH 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P EY++ ++VAK L+E L T+ ++ V G+ L+ I HP+ RD
Sbjct: 249 PEYEYALVRDGEEYLVVAKELMEALNKTWNRELTAVKTVKGKELEGIVCRHPLM--SRDS 306
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
L+ V+ +GTG VH AP HG+DDF++ + VL + +QGK++ + G EG+
Sbjct: 307 VLICGEHVTLEQGTGCVHTAPGHGEDDFIVGRQYGLDVLCPVDHQGKFTKEGGQ-YEGMK 365
Query: 598 ILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALAC 656
+ + L E +L ++ +HSYP+ WR K P+I +A++QWF + + AL
Sbjct: 366 VEQANAVILKDLQEAGMLIHQDKIKHSYPHCWRCKNPIIFRATEQWFASIDGFRQAALEE 425
Query: 657 LEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCT 714
++ V ++P K + + IA R WCISRQR WGVPIP+FY D I+NE I+
Sbjct: 426 IDRVEWIPAWGKDRIYNMIADRGDWCISRQRTWGVPIPIFYCEDCGKEIINEQTIEKLQE 485
Query: 715 LIDEHGPDFWWSLSVEQLL----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP--- 767
+ + G D W++ SVE+LL + K DI+D+WFDSG S VLK +P
Sbjct: 486 IFRQEGSDAWFAHSVEELLPEGLKCQCGGTEFRKETDIMDVWFDSGTSHVGVLKLRPELS 545
Query: 768 --AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISA 825
A +Y+EG DQ GWF SSL TSVA AP++ V HGF+VDEKG KMSKS GN +
Sbjct: 546 YPADMYLEGSDQHRGWFNSSLSTSVAAYGQAPYKTVLTHGFLVDEKGRKMSKSQGNGVDP 605
Query: 826 HDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKN 885
+ + G D+LR WV++ ++ V
Sbjct: 606 LQVVRDM-----------------------------GADILRLWVSSADYRN-DVAASPR 635
Query: 886 ILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLY 941
I+N + +KIR++LR+LLG L++ + + + +D ++L RL + Y
Sbjct: 636 IMNQMVEAYRKIRNTLRFLLGNLYDFNPEQDRVEYSKLQEIDRWVLTRLARVIEKVIKAY 695
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
+++ + NF ELSA Y +VKDR Y + R S ++ I + L+R +
Sbjct: 696 ETYEFHVVYHTVHNFCTVELSAIYLDIVKDRAYVEGKESLLRRSAQTVMNEILNALVRLL 755
Query: 1002 APIMPHLAEEVYSHLPS 1018
API+ A+E+++++P
Sbjct: 756 APILVFTADEIWAYIPG 772
Score = 286 bits (733), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 234/397 (58%), Gaps = 11/397 (2%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++Y +E+ G+ +FILHDGPPYANG H+GHA+NK+LKDI +R +QG YVPG
Sbjct: 34 GDIYGQVQESRRGRRKFILHDGPPYANGDIHLGHALNKVLKDIIIRFKTMQGYDAPYVPG 93
Query: 65 WDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE +K + +S L+ R + ++A E + QKAEF+ GV +W+ N
Sbjct: 94 WDTHGLPIEQQVIKKLGLNRHAVSTLEFRARCSDYAKEYVEIQKAEFKRLGVRGNWD-NA 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T KEY Q+ F + K+ YIY+ LKPVYW PS TALAE+E++Y D S +I++
Sbjct: 153 YLTLHKEYEAAQIGVFGEMAKKGYIYKGLKPVYWCPSCETALAEAEIDY-ADKKSTAIFV 211
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
K + + L G + +IWTTTPW+LPAN I+ +P EY++ ++VAK L
Sbjct: 212 KFPVKEDQGLL--GKDNTSVVIWTTTPWTLPANLAISVHPEYEYALVRDGEEYLVVAKEL 269
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
+E+L T+ ++ V G+ L+ I HP+ RD L+ V+ +GTG VH AP
Sbjct: 270 MEALNKTWNRELTAVKTVKGKELEGIVCRHPLM--SRDSVLICGEHVTLEQGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE 361
HG+DDF++ + VL + +QGK++ + G EG+ + + L E +L +
Sbjct: 328 GHGEDDFIVGRQYGLDVLCPVDHQGKFTKEGGQ-YEGMKVEQANAVILKDLQEAGMLIHQ 386
Query: 362 N-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +HSYP+ WR K P+I +A++QWF + + AL
Sbjct: 387 DKIKHSYPHCWRCKNPIIFRATEQWFASIDGFRQAAL 423
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 90/158 (56%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILK 1167
+ +QGK++ + G EG+ + + L E +L ++ +HSYP+ WR K P+I +
Sbjct: 348 VDHQGKFTKEGGQ-YEGMKVEQANAVILKDLQEAGMLIHQDKIKHSYPHCWRCKNPIIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF + + AL ++ V ++P K + + IA R WCISRQR WGVPIP+FY
Sbjct: 407 ATEQWFASIDGFRQAALEEIDRVEWIPAWGKDRIYNMIADRGDWCISRQRTWGVPIPIFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D I+NE I+ + + G D W++ VE+LL
Sbjct: 467 CEDCGKEIINEQTIEKLQEIFRQEGSDAWFAHSVEELL 504
>gi|238853976|ref|ZP_04644333.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
gi|238833421|gb|EEQ25701.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
Length = 933
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 322/625 (51%), Gaps = 65/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIEDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y V V G ++ + E+L W D V+ G +TY HP+ +
Sbjct: 247 PKFDYVVVEVNGKKYVIGADRLSAVAEDLGWK---DYKVLKTLKGTDFDRMTYRHPLYGK 303
Query: 534 ----QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
Q L ++ +V+ GTGLVH A G+DD+ + + V + QG+++ +
Sbjct: 304 TGLGQYGL-IMNDTYVTDDDGTGLVHNATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEV 362
Query: 590 -GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 363 PDPDLVGM-FYDDANKVVTDKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASV 421
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVN 705
++ + + LA +E+ NF+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 422 DKFRDQILAEIEKANFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVT 481
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWS 760
I+H + ++ G + W++ + ++LL + N K DILD+WFDSG SW+
Sbjct: 482 PETIEHVAQIFEKEGSNAWYTHTAKELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWA 541
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V+K++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KM
Sbjct: 542 GVMKERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKM 601
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNVIS +D+ + G +++R WVA A
Sbjct: 602 SKSLGNVISPNDV-----------------------------IKQMGAEIIRLWVAG-AD 631
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
V + ++IL S + +KIR+++R++L + SI+ VD YM +L
Sbjct: 632 TTSDVVVSQDILRQSAESYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYMEIKLN 691
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
Y +F + + + +F+ N+LSAFY KD LY D + E R S ++
Sbjct: 692 RLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDVLYIDPEDSETRRSMQTVIY 751
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
++ L + + PI+PH EEV+ +L
Sbjct: 752 DVLVKLTKLMTPILPHTMEEVWGYL 776
Score = 232 bits (592), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 219/417 (52%), Gaps = 24/417 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA+E + Q A+F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKSMDRAKYRELCRQFAVEQVKKQMADFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 158 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIED 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +Y V V G ++ + E
Sbjct: 217 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYVVVEVNGKKYVIGADRLSAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKE----QRDLKLLPAGFVSSSKGTGLVHC 299
L W D +V+ G +TY HP+ + Q L ++ +V+ GTGLVH
Sbjct: 274 DLGW---KDYKVLKTLKGTDFDRMTYRHPLYGKTGLGQYGL-IMNDTYVTDDDGTGLVHN 329
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--D 356
A G+DD+ + + V + QG+++ + P L G+ D V +E
Sbjct: 330 ATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEVPDPDLVGM-FYDDANKVVTDKLEKAGA 388
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
+L + HSYP+DWRTKKPVI +A+ QWF ++ + + L N + G T
Sbjct: 389 LLKLSFFTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKANFIPSWGKTR 445
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E NF+P K L + I R
Sbjct: 395 FTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKANFIPSWGKTRLYNMIKDRG 454
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ ++LL
Sbjct: 455 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTHTAKELL 509
>gi|377831352|ref|ZP_09814329.1| isoleucyl-tRNA synthetase [Lactobacillus mucosae LM1]
gi|377554779|gb|EHT16481.1| isoleucyl-tRNA synthetase [Lactobacillus mucosae LM1]
Length = 931
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/623 (32%), Positives = 325/623 (52%), Gaps = 65/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D ++K+ Y ++ L D + + WTTTPW++PA++ +A N
Sbjct: 191 SALAEAEVEYH-DVVAKTAYFCEQVIDGKGRL---DNDTYLVGWTTTPWTIPASEAVAVN 246
Query: 478 PALEYSVASVKG-------ANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
P + Y+V A+ +VAKC E W + +VV GQ + +T HP
Sbjct: 247 PKIIYAVVKPANDDRKFVIADELVAKC-AEKFGWD---EYEVVDRLSGQDMDRMTSKHPY 302
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
N +++ ++ V+ GTGLVH AP +G DD+ + +P+ + +QG + + G
Sbjct: 303 N--DKEMLVVNGDHVTLEAGTGLVHTAPGYGDDDYQVGKKYGLPIFAPMNDQGVLTAENG 360
Query: 591 PGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
P +G+ D D L L++ +L E +HSYP+DWRTKKP++ +A+ QWF+ ++
Sbjct: 361 PEFDGV-FYQDADDISLDLLKKHHALLKQEPLEHSYPFDWRTKKPIVFRATDQWFVSIDK 419
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 707
++ E L ++EV + P K L + + R W ISRQRVWGVP+P+FY D T I+ E
Sbjct: 420 MRDEILNAVDEVKYYPGWGKVRLHNMLKDRGDWVISRQRVWGVPLPIFYAEDGTPIMTEE 479
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I H L E+G + W+ + LL + + K DI+D+WFDSG S V
Sbjct: 480 TINHVSDLFREYGSNVWFERDAKDLLPEGFTSEHSPHGQFKKETDIMDVWFDSGSSHQGV 539
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
L ++ P +Y+EG DQ GWF SSL+ SV L AP++++ GF +D+ G KMSK
Sbjct: 540 LAERDYLTYPCDMYLEGSDQYRGWFNSSLICSVVLSGHAPYKSIVSQGFTLDKDGKKMSK 599
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNVI + + + G +++R WV + A
Sbjct: 600 SIGNVIDPNKVVK-----------------------------QMGAEIIRLWVMS-ADTS 629
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + + D +K+R++ R+LL + + ++S VD YM+ +L F
Sbjct: 630 ADVRVSMDTFKQISDAYRKLRNTFRFLLANTADFDANDDTVSYEKLESVDQYMVVKLNRF 689
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
M L+ E+ + A + L+NFV N+LSAFY + KD LY ++ + AR S ++I
Sbjct: 690 LKEMRDLFDEYDFMTAYKKLINFVNNDLSAFYMNVAKDVLYVEAKDSHARRSMQTVFYDI 749
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L++ + PI+PH EEV+ ++
Sbjct: 750 LVTLVKLLTPILPHTTEEVWEYM 772
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 229/399 (57%), Gaps = 24/399 (6%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP FILHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HG
Sbjct: 39 QRQKLNQGKPTFILHDGPPYANGNIHIGHAMNKISKDFIVRYKSMAGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L + K +S + R + FALE ++ Q+ +F+ GV +W+ N Y T K
Sbjct: 99 LPIEHQLTKMGYDRKKMSTTEFRDLCRKFALEQVDKQRTDFKRLGVSGEWD-NPYLTLAK 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F K+ +Y+ KPVYWS SS +ALAE+E+EY D V+K+ Y ++
Sbjct: 158 EFEAQQIKVFGAFAKKGLLYQAKKPVYWSWSSESALAEAEVEYH-DVVAKTAYFCEQVID 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-------ANVIVAKC 240
L D + + WTTTPW++PA++ +A NP + Y+V A+ +VAKC
Sbjct: 217 GKGRL---DNDTYLVGWTTTPWTIPASEAVAVNPKIIYAVVKPANDDRKFVIADELVAKC 273
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
E W + EVV GQ + +T HP N +++ ++ V+ GTGLVH A
Sbjct: 274 -AEKFGW---DEYEVVDRLSGQDMDRMTSKHPYN--DKEMLVVNGDHVTLEAGTGLVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VL 358
P +G DD+ + +P+ + +QG + + GP +G+ D D L L++ +L
Sbjct: 328 PGYGDDDYQVGKKYGLPIFAPMNDQGVLTAENGPEFDGV-FYQDADDISLDLLKKHHALL 386
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E +HSYP+DWRTKKP++ +A+ QWF+ ++++ E L
Sbjct: 387 KQEPLEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDEIL 425
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ +QG + + GP +G+ + D L L++ +L E +HSYP+DWRTKKP++
Sbjct: 349 MNDQGVLTAENGPEFDGV-FYQDADDISLDLLKKHHALLKQEPLEHSYPFDWRTKKPIVF 407
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF+ ++++ E L ++ V + P K L + + R W ISRQRVWGVP+P+F
Sbjct: 408 RATDQWFVSIDKMRDEILNAVDEVKYYPGWGKVRLHNMLKDRGDWVISRQRVWGVPLPIF 467
Query: 1227 YDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D T I+ E I H L E+G + W+ + LL
Sbjct: 468 YAEDGTPIMTEETINHVSDLFREYGSNVWFERDAKDLL 505
>gi|154173836|ref|YP_001407768.1| isoleucyl-tRNA synthetase [Campylobacter curvus 525.92]
gi|166200201|sp|A7GX26.1|SYI_CAMC5 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|112802487|gb|EAT99831.1| isoleucyl-tRNA synthetase [Campylobacter curvus 525.92]
Length = 919
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 324/630 (51%), Gaps = 68/630 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D SIY+ +L+ L G A+IWTTTPW+LPANQ I+
Sbjct: 194 SALAEAEVEYE-DKEDYSIYVAFELDSDALAKL-GVKLAKAVIWTTTPWTLPANQAISLK 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P Y + S N+I AK L+E+L T +++ +F L++ I+P+N R
Sbjct: 252 PDEIYVLTS---ENLIFAKPLLESLVNLGLTKGEILKEFVSNELENTHAINPLN--DRKS 306
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIP-VLNLITNQGKYS---------- 586
+ L V GTGLVH AP HG+DD+ + L +L + + G Y
Sbjct: 307 RFLLGDHVLMDGGTGLVHTAPGHGEDDYYICLRYGFKEILMPVDDGGLYDETLKAHSLLR 366
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
D G++I ++++ L+ ++L + HSYP+ WRT KPVI +A++QWFI
Sbjct: 367 ADVVDSFVGMHIF-KANEKIIELLGENLLHVSKFTHSYPFCWRTHKPVIYRATKQWFIAM 425
Query: 647 ER-------IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDG 699
+ ++ A LE V F P K + I RP WCISRQR WGVPI F
Sbjct: 426 DEPKLGGKTLREVARGELENVKFYPSVGIKRIGSMIENRPDWCISRQRDWGVPIAFFRRK 485
Query: 700 DTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWFDS 755
DT I ++H + ++ G D WW +SVE+LL ++ N+ K DILD+WFDS
Sbjct: 486 DTKEPIFEPKILEHIAKIFEQKGADAWWDMSVEELLAPDSGFEAKNLEKVMDILDVWFDS 545
Query: 756 GISWSHVLKDK-------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVV 808
G +W VL K PA +Y+EG DQ GWF SSLL S A+ AP++N+ HGF V
Sbjct: 546 GSTWHAVLNSKNYDAGSYPADMYLEGSDQHRGWFQSSLLVSTAINSHAPYKNILTHGFTV 605
Query: 809 DEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRW 868
DE G KMSKS GNV++ D+ + +YGV++LR
Sbjct: 606 DENGQKMSKSKGNVVAPQDVAK-----------------------------SYGVEILRL 636
Query: 869 WVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLK 928
WV + + I +NIL + +KIR+++R+LL + N E+ G+ ++D ++L
Sbjct: 637 WVGL-SDYSSDLKISENILKQVSEQYRKIRNTIRFLLANV-NDLETIGTDFGFLDQWILG 694
Query: 929 RLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLH 988
R + + + +++ +LLNF+ +LS Y + KDRLYCD+ + R S
Sbjct: 695 RAKRVFDEASKCFRAYDFSKGFNLLLNFLSADLSGIYLDICKDRLYCDAKDSPRRRSAQS 754
Query: 989 TLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
+ I LL +AP + + +EV + P+
Sbjct: 755 AMAIITKSLLPLIAPTLTYTVDEVMDYAPA 784
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 215/381 (56%), Gaps = 23/381 (6%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA---I 77
F +HDGPPYANG HIGHA+NKILKDI +++ G+ V YVPGWDCHGLPIE + +
Sbjct: 52 FAIHDGPPYANGHLHIGHALNKILKDIITKTHYFFGENVRYVPGWDCHGLPIEQQVEVKL 111
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
K K LS IR+ + A E I+ Q+ EF++ G++ D+E N Y T E+ +
Sbjct: 112 GDKKKELSKTQIRELCRAHAREFIDIQREEFKALGIIGDFE-NPYMTMKFEFEADIYRSL 170
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGAT 197
+ K+ + KPVYWS ++++ALAE+E+EY+ D SIY+ +L+ L G
Sbjct: 171 CEIAKKGLLIERSKPVYWSWAAKSALAEAEVEYE-DKEDYSIYVAFELDSDALAKL-GVK 228
Query: 198 DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEVVC 257
A+IWTTTPW+LPANQ I+ P Y + S N+I AK L+ESL T E++
Sbjct: 229 LAKAVIWTTTPWTLPANQAISLKPDEIYVLTS---ENLIFAKPLLESLVNLGLTKGEILK 285
Query: 258 DFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIP 317
+F L++ I+P+N R + L V GTGLVH AP HG+DD+ + L
Sbjct: 286 EFVSNELENTHAINPLN--DRKSRFLLGDHVLMDGGTGLVHTAPGHGEDDYYICLRYGFK 343
Query: 318 -VLNLITNQGKYS----------PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHS 366
+L + + G Y D G++I ++++ L+ ++L + HS
Sbjct: 344 EILMPVDDGGLYDETLKAHSLLRADVVDSFVGMHIF-KANEKIIELLGENLLHVSKFTHS 402
Query: 367 YPYDWRTKKPVILKASQQWFI 387
YP+ WRT KPVI +A++QWFI
Sbjct: 403 YPFCWRTHKPVIYRATKQWFI 423
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 1125 GLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER------ 1178
G++I + ++++ L+ ++L + HSYP+ WRT KPVI +A++QWFI +
Sbjct: 375 GMHIF-KANEKIIELLGENLLHVSKFTHSYPFCWRTHKPVIYRATKQWFIAMDEPKLGGK 433
Query: 1179 -IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVN 1235
++ A LE V F P K + I RP WCISRQR WGVPI F DT I
Sbjct: 434 TLREVARGELENVKFYPSVGIKRIGSMIENRPDWCISRQRDWGVPIAFFRRKDTKEPIFE 493
Query: 1236 EANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
++H + ++ G D WW + VE+LL
Sbjct: 494 PKILEHIAKIFEQKGADAWWDMSVEELL 521
>gi|259046445|ref|ZP_05736846.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
gi|259036861|gb|EEW38116.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
Length = 929
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 218/623 (34%), Positives = 331/623 (53%), Gaps = 57/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ K+ + + D +IWTTTPW+LPAN I +
Sbjct: 192 SSLAEAEIEYK-DVESPSIYVAFKVKDGKGVV---SDDASFVIWTTTPWTLPANLGIFVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y+ + +VAK LV +L T ++VV +F G L+ T HP +R+
Sbjct: 248 PDYVYAEVKTEKGTFVVAKELVNSLAETLGWESVEVVKEFRGNELEYATAWHPFY--ERE 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ +V+ GTGLVH AP HG+DDF + + VL+ + NQG Y+ +A PG EG+
Sbjct: 306 SLVMLGDYVTLDAGTGLVHSAPGHGEDDFYYSRKYNLDVLSPVDNQGHYTAEA-PGFEGM 364
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L + L +Y HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 365 FYAKANKVITDMLADNGSLLKLSYFVHSYPHDWRTKKPVIFRATPQWFASIDTFRQDILD 424
Query: 656 CLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E +V + S + + + + R W ISRQRVWGVP+PVFY +G+ II E I+H
Sbjct: 425 VIENDVKWYHPSGQVRIYNMVRDRGDWVISRQRVWGVPLPVFYGENGEPIITPE-TIEHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L+ E G D W+ + LL + S N TK DI+D+WFDSG S + VL +P
Sbjct: 484 AKLVGEFGSDVWFEREAKDLLPEGFTHPSSPNGTFTKEMDIMDVWFDSGSSHAGVLSVRP 543
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSL TSVA+ AP++ V GFV+D +G KMSKS+GNV
Sbjct: 544 ELTFPADLYLEGSDQYRGWFNSSLTTSVAVHKQAPYKAVLSQGFVMDGEGKKMSKSLGNV 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
IS AK++ G D++R WV++ + V I
Sbjct: 604 ISP-----------------------------AKEMQTKGADIIRLWVSS-VDYESDVRI 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
ILN + +KIR+++R++L + S +++ R VD YM+ R + T++
Sbjct: 634 STEILNQISEAYRKIRNTMRFMLANTTDFEPSKHAVAFKDLRSVDQYMMIRFNDVVKTIE 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y ++++ + ++NF +LS FY KD +Y + + R + +++I L
Sbjct: 694 EAYENYEFSTIYQTVMNFCTVDLSQFYLDFAKDVVYIEHEDNYQRRAMQTVIYDILVKLT 753
Query: 999 RTVAPIMPHLAEEVYSHLPSRQG 1021
+ ++PI+ H +EEV+ +L +
Sbjct: 754 KLLSPILVHTSEEVWKYLKEEEA 776
Score = 292 bits (748), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 231/390 (59%), Gaps = 18/390 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+A N GKP F+LHDGPPYANG H+GHA+NKI KD +RS + G R YVPGWD HG
Sbjct: 39 QRQAKNEGKPSFVLHDGPPYANGALHMGHALNKISKDFIVRSKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIELKAITSKD----KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTF 125
LPIE +A+ + + K LS + RK +AL ++ Q+AEF+ GV W+ N Y T
Sbjct: 99 LPIE-QALANAEGVDRKKLSIAEFRKLCAEYALRQVDNQRAEFKRLGVTGTWD-NPYLTL 156
Query: 126 DKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKL 185
E+ Q+ F + + YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ K+
Sbjct: 157 QPEFEAEQIRVFGKMAENGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVESPSIYVAFKV 215
Query: 186 NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL 245
+ + D +IWTTTPW+LPAN I +P Y+ + +VAK LV SL
Sbjct: 216 KDGKGVV---SDDASFVIWTTTPWTLPANLGIFVHPDYVYAEVKTEKGTFVVAKELVNSL 272
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
T +EVV +F G L+ T HP +R+ ++ +V+ GTGLVH AP HG
Sbjct: 273 AETLGWESVEVVKEFRGNELEYATAWHPFY--ERESLVMLGDYVTLDAGTGLVHSAPGHG 330
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY- 363
+DDF + + VL+ + NQG Y+ +A PG EG+ K L + L +Y
Sbjct: 331 EDDFYYSRKYNLDVLSPVDNQGHYTAEA-PGFEGMFYAKANKVITDMLADNGSLLKLSYF 389
Query: 364 QHSYPYDWRTKKPVILKASQQWF--IDTER 391
HSYP+DWRTKKPVI +A+ QWF IDT R
Sbjct: 390 VHSYPHDWRTKKPVIFRATPQWFASIDTFR 419
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 6/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
L+ + NQG Y+ +A PG EG+ K L + L +Y HSYP+DWRTKKPV
Sbjct: 345 LSPVDNQGHYTAEA-PGFEGMFYAKANKVITDMLADNGSLLKLSYFVHSYPHDWRTKKPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A+ QWF + + + L +E V + S + + + + R W ISRQRVWGVP+
Sbjct: 404 IFRATPQWFASIDTFRQDILDVIENDVKWYHPSGQVRIYNMVRDRGDWVISRQRVWGVPL 463
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
PVFY +G+ II E I+H L+ E G D W+ + LL
Sbjct: 464 PVFYGENGEPIITPE-TIEHVAKLVGEFGSDVWFEREAKDLL 504
>gi|374583006|ref|ZP_09656100.1| isoleucyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
gi|374419088|gb|EHQ91523.1| isoleucyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
Length = 925
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 328/621 (52%), Gaps = 52/621 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY D + +IY+K + + L E T +IWTTTPW+LPAN I+ +
Sbjct: 192 TALAEAEIEYA-DKPATAIYVKFAVRNGLSVLTEENT--FVVIWTTTPWTLPANLAISVH 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P L Y+V S + + +VA+ ++++L+ +Q ++ V G+ L+ + +P+ RD
Sbjct: 249 PELTYAVVSAQQEHWVVAEGMLDSLRSLWQLELPVERTLTGKELEGVLCKNPLM--DRDS 306
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ V+ GTG VH APAHG+DDFL+ +PVL + ++GK++ + G GL
Sbjct: 307 MVICGEHVTLEAGTGCVHTAPAHGEDDFLVGKQYGLPVLCPVDHRGKFTSEGG-AYAGLK 365
Query: 598 ILGDGKDQVLHLV-EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALAC 656
V L D++ E +HSYP+ WR K P+I +A++QWF + + AL
Sbjct: 366 TEKANPVIVEDLKGTGDLVLEETIKHSYPHCWRCKSPIIFRATEQWFASIDGFRQAALDE 425
Query: 657 LEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCT 714
+E+V ++P + + + IA R WCISRQR WGVPIP+FY D ++VN+ I
Sbjct: 426 IEKVRWIPAWGRDRIFNMIADRGDWCISRQRTWGVPIPIFYCEDCGNVLVNDQTIAKVQD 485
Query: 715 LIDEHGPDFWWSLSVEQLLNTSDV----NSNVTKSNDILDIWFDSGISWSHVLKDK---- 766
+ G D W++ S +LL + K DI+D+WFDSG S + VLK +
Sbjct: 486 FFRQEGSDAWFAHSPAELLPEGTACECGGTKFRKETDIMDVWFDSGTSHAGVLKQRAELA 545
Query: 767 -PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISA 825
PA +Y+EG DQ GWF SSL TSVA AP+RNV HGFVVDE+G KMSKS+GN +
Sbjct: 546 WPADLYLEGSDQHRGWFNSSLSTSVAAFGQAPYRNVLTHGFVVDEQGRKMSKSLGNGVDP 605
Query: 826 HDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKN 885
+ Q G D+LR WV++ K+ V
Sbjct: 606 LKVVQ-----------------------------ELGADILRLWVSSVDYKN-DVAASPR 635
Query: 886 ILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLY 941
I+ + +KIR+++R+LL L++ + +S + +D + L +L + + Y
Sbjct: 636 IMKQMSEAYRKIRNTMRFLLSNLNDFDPAKDKVSYQELQEIDRWALLKLSKVVERVLLGY 695
Query: 942 GEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTV 1001
+++ A + NF ELSA Y + KDRLY + R S L+ + L+R +
Sbjct: 696 ESYEFHWAYHTIHNFCTIELSAVYLDIAKDRLYVEGKTSLLRRSAQTVLYEVLDALVRLL 755
Query: 1002 APIMPHLAEEVYSHLPSRQGT 1022
API+ + EE++ ++P + T
Sbjct: 756 APILSFMTEEIWPYIPGEKTT 776
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 237/397 (59%), Gaps = 11/397 (2%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY ++A G+P+FILHDGPPYANG H+GHA+NK+LKDI ++ + G YVPG
Sbjct: 34 EKLYEKVQKAREGRPKFILHDGPPYANGDIHLGHAINKVLKDIIVKYKTMMGFDAPYVPG 93
Query: 65 WDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE +K + +S L+ R+K K++A + + Q+ EF+ GV DW+H
Sbjct: 94 WDTHGLPIEQQVIKKLGVNRHAVSALEFRQKCKDYAEKYVGIQREEFKRLGVRGDWDHP- 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T KEY Q+ F ++ K+ YIY+ LKPVYW PS TALAE+E+EY D + +IY+
Sbjct: 153 YLTLQKEYEAAQIGVFGDMTKKGYIYKGLKPVYWCPSCETALAEAEIEYA-DKPATAIYV 211
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
K + + L E T +IWTTTPW+LPAN I+ +P L Y+V S + + +VA+ +
Sbjct: 212 KFAVRNGLSVLTEENT--FVVIWTTTPWTLPANLAISVHPELTYAVVSAQQEHWVVAEGM 269
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
++SL+ +Q ++ V G+ L+ + +P+ RD ++ V+ GTG VH AP
Sbjct: 270 LDSLRSLWQLELPVERTLTGKELEGVLCKNPLM--DRDSMVICGEHVTLEAGTGCVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV-EPDVLWT 360
AHG+DDFL+ +PVL + ++GK++ + G GL V L D++
Sbjct: 328 AHGEDDFLVGKQYGLPVLCPVDHRGKFTSEGG-AYAGLKTEKANPVIVEDLKGTGDLVLE 386
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E +HSYP+ WR K P+I +A++QWF + + AL
Sbjct: 387 ETIKHSYPHCWRCKSPIIFRATEQWFASIDGFRQAAL 423
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 1143 DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLR 1202
D++ E +HSYP+ WR K P+I +A++QWF + + AL +E V ++P + +
Sbjct: 382 DLVLEETIKHSYPHCWRCKSPIIFRATEQWFASIDGFRQAALDEIEKVRWIPAWGRDRIF 441
Query: 1203 DQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVE 1260
+ IA R WCISRQR WGVPIP+FY D ++VN+ I + G D W++
Sbjct: 442 NMIADRGDWCISRQRTWGVPIPIFYCEDCGNVLVNDQTIAKVQDFFRQEGSDAWFAHSPA 501
Query: 1261 QLL 1263
+LL
Sbjct: 502 ELL 504
>gi|387129440|ref|YP_006292330.1| isoleucyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386270729|gb|AFJ01643.1| Isoleucyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 912
Score = 347 bits (889), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 212/653 (32%), Positives = 339/653 (51%), Gaps = 63/653 (9%)
Query: 395 EALVCKTVGNILGRVGITHD-RP-------GTALAESELEYKPDHISKSIYLKIKLNQVP 446
EA + +T+GNI+ + +P G+ALAE+E+EY+ D S +I ++ K+
Sbjct: 148 EADIIRTLGNIIANDHLHKGVKPVHWCVDCGSALAEAEVEYE-DKRSSAIDVRFKVADQA 206
Query: 447 AH----LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVENL 502
A EGA + +IWTTTPW+LPANQ + +P L+Y + +++A+ L E
Sbjct: 207 AFDAVCANEGAGETSLVIWTTTPWTLPANQAVCLHPELDYVLLQCGQERLLLAEALYETA 266
Query: 503 KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 562
+Q +++ G L+ +T HP R + ++ V++ GTG VH AP HGQ
Sbjct: 267 LQRYQLSGEIIARVKGAALEGLTLNHPFYS--RQVPVILGDHVTTEAGTGAVHTAPGHGQ 324
Query: 563 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE-NYQ 621
DD+++ + + V N + G + PD P G ++ + L + D L +
Sbjct: 325 DDYIVGIKYGLKVDNPVGGNGVFLPDT-PLFAGQSVFKANPQVIETLQQHDALLCHVEIE 383
Query: 622 HSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRP 679
HSYP+ WR K P+I +A+ QWFI D ++ A+ +E+ +++P+ +K + + ++ RP
Sbjct: 384 HSYPHCWRHKTPIIFRATPQWFISMDQNGLRQAAMQEIEQTDWLPDWGQKRIENMVSGRP 443
Query: 680 YWCISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTS 736
WCISRQR WGVPIP+F G+ A I+ +++ G D W+ LS E L+
Sbjct: 444 DWCISRQRTWGVPIPLFVHQQTGELHPNTAALIEQVAVAVEQKGIDAWFELSAESLI--G 501
Query: 737 DVNSNVTKSNDILDIWFDSGISWSHVLK-----DKPAHVYMEGMDQINGWFMSSLLTSVA 791
D ++ K D LD+WFDSG++ + VL +PA +Y+EG DQ GWF SSLLTSVA
Sbjct: 502 DDANDYDKVTDTLDVWFDSGVTHACVLDRREQLTRPADLYLEGSDQHRGWFQSSLLTSVA 561
Query: 792 LKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDI 851
AP+++V HGF VD G KMSKS GNV++ + V N+
Sbjct: 562 ATGKAPYKSVLTHGFTVDAHGKKMSKSKGNVVAPQQV-------------VNNL------ 602
Query: 852 TQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNH 911
G D++R WVAA + + IL + D ++IR++ RYLL L++
Sbjct: 603 ----------GADIIRLWVAA-TDYSAEMTVSDEILKRTADSYRRIRNTARYLLSNLNDF 651
Query: 912 SESTGSISRY----VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFT 967
T + +D ++L R + Q + T Y +Q+ + + + NF NEL + Y
Sbjct: 652 DPETNLVQATELLPLDRWILDRAYQVQTEVKTAYENYQFHQIYQKVHNFCANELGSAYLD 711
Query: 968 LVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQ 1020
+ KDR Y N R S ++++ L+R +API+ A+E++S +P ++
Sbjct: 712 ITKDRQYTMPANSLGRRSSQTAMYHVLEALVRWIAPILTFTADELWSFIPGKR 764
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 225/396 (56%), Gaps = 15/396 (3%)
Query: 4 FSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
+ +L + A NGK FILHDGPPYANG HIGHAVNKILKD+ L+S L G YVP
Sbjct: 22 YQQLREKGKSAPNGK--FILHDGPPYANGDIHIGHAVNKILKDMILKSKTLSGYDTPYVP 79
Query: 64 GWDCHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
GWDCHGLPIEL K + ++P + R+ +++A + +N Q+ +F+ GVLADW+ N
Sbjct: 80 GWDCHGLPIELNVEKKVGKPGVKVTPAEFRQACRDYAAKQVNGQREDFKRLGVLADWD-N 138
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T D + + + N+ D++++ +KPV+W +ALAE+E+EY+ D S +I
Sbjct: 139 PYLTMDFAFEADIIRTLGNIIANDHLHKGVKPVHWCVDCGSALAEAEVEYE-DKRSSAID 197
Query: 181 LKIKLNQVPAH----LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVI 236
++ K+ A EGA + +IWTTTPW+LPANQ + +P L+Y + ++
Sbjct: 198 VRFKVADQAAFDAVCANEGAGETSLVIWTTTPWTLPANQAVCLHPELDYVLLQCGQERLL 257
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
+A+ L E+ +Q E++ G L+ +T HP R + ++ V++ GTG
Sbjct: 258 LAEALYETALQRYQLSGEIIARVKGAALEGLTLNHPFYS--RQVPVILGDHVTTEAGTGA 315
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP HGQDD+++ + + V N + G + PD P G ++ + L + D
Sbjct: 316 VHTAPGHGQDDYIVGIKYGLKVDNPVGGNGVFLPDT-PLFAGQSVFKANPQVIETLQQHD 374
Query: 357 VLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTER 391
L +HSYP+ WR K P+I +A+ QWFI ++
Sbjct: 375 ALLCHVEIEHSYPHCWRHKTPIIFRATPQWFISMDQ 410
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVI 1165
N + G + PD P G ++ + L + D L +HSYP+ WR K P+I
Sbjct: 339 NPVGGNGVFLPDT-PLFAGQSVFKANPQVIETLQQHDALLCHVEIEHSYPHCWRHKTPII 397
Query: 1166 LKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+A+ QWFI D ++ A+ +E +++P+ +K + + ++ RP WCISRQR WGVPI
Sbjct: 398 FRATPQWFISMDQNGLRQAAMQEIEQTDWLPDWGQKRIENMVSGRPDWCISRQRTWGVPI 457
Query: 1224 PVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
P+F G+ A I+ +++ G D W+ L E L+
Sbjct: 458 PLFVHQQTGELHPNTAALIEQVAVAVEQKGIDAWFELSAESLIG 501
>gi|431751288|ref|ZP_19539979.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2620]
gi|430615728|gb|ELB52671.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2620]
Length = 932
Score = 347 bits (889), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 338/643 (52%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D+ +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DIAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWEKVTVLKEFAGQEMEYMTASHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 302 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 359
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 360 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 478 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 537
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 538 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 598 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL +
Sbjct: 628 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVI 687
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 688 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 748 AVALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 789
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 237/397 (59%), Gaps = 23/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQKLNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K +S + KK + +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 99 LPIEQVLANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEH-PYVTLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++ +
Sbjct: 158 SYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVAFNVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
L E D+ +IWTTTPW+LPANQ IA NP Y + G +VAK L+E
Sbjct: 217 GKGILDE---DIAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLLE---- 269
Query: 248 TFQTDI-----EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
T QT+I V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP
Sbjct: 270 TVQTEIGWEKVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWT 360
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 328 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKL 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 386 DFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|377557351|ref|ZP_09787001.1| Isoleucyl-tRNA synthetase [Lactobacillus gastricus PS3]
gi|376165757|gb|EHS84698.1| Isoleucyl-tRNA synthetase [Lactobacillus gastricus PS3]
Length = 939
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 326/625 (52%), Gaps = 60/625 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E++YK D S+S + ++ L D + L+WTTTPW++PA++ I
Sbjct: 191 SALAEAEVDYK-DITSQSAFYGERVKDGKGVL---DNDTYFLVWTTTPWTIPASEGIVVG 246
Query: 478 PALEYSVASVKG--ANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINK-- 532
+YS+ + +VA LVE L F ++ + + G + +T H +
Sbjct: 247 ADFDYSLFTHDDDPKKYVVASDLVEKLSEKFGWHNVQTLKTYKGAEFEYMTAEHAFSSVD 306
Query: 533 ---EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
+ R++ ++ FV++S GTGLVH AP +G DD+ + + +PV + +QG + +A
Sbjct: 307 PFYKDREVLVMLGDFVTTSDGTGLVHTAPGYGDDDYQVGIKYGLPVFAPVNDQGYQTEEA 366
Query: 590 GPGLEGLNILGDGKDQVLHLVEPDVL-WTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
GP G+ + L + D+L E+ HSYP+DWRTKKP+I +A+ QWF+ ++
Sbjct: 367 GPDFAGVFYQDSEAIALKKLEDADLLVLQEDVTHSYPFDWRTKKPIIFRATDQWFVSIDK 426
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 707
++ + L ++EV + P K LR+ + R W ISRQRVWGVP+P+FY D T I+ +
Sbjct: 427 MRDDILKAVDEVTYYPAWGKTRLRNMLRDRGDWVISRQRVWGVPLPIFYAEDGTPIMTKE 486
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I H L ++G + W+ + LL + N VTK DI+D+WFDSG S V
Sbjct: 487 TIDHVSDLFRQYGSNVWFDRDAKDLLPEGFTSEHSPNGKVTKETDIMDVWFDSGSSHQGV 546
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
L ++ P+ +Y+EG DQ GWF SSL+TSV + AP+++V GF +D +G KMSK
Sbjct: 547 LAERDYLTYPSDMYLEGSDQYRGWFNSSLITSVVVSGHAPYKSVLSQGFTLDGEGKKMSK 606
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASK 876
SVGNVI +++ + G +++R WV +A S
Sbjct: 607 SVGNVIDPNEVVE-----------------------------KMGAEIIRLWVMSADTSA 637
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V +G L + +K+R++ R+LL + T + VD YM +
Sbjct: 638 DVRVSMG--TLQQMSEAYRKLRNTFRFLLANTSDFDPKTNRVDYADLSSVDQYMAVKFNR 695
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
F M ++ + + ++L+NFV N+LSAFY + KD LY D + + R S ++
Sbjct: 696 FLKHMREYMDQYDFLDSYKLLINFVNNDLSAFYMNVAKDVLYIDGEDSQTRRSMQTVFYD 755
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
I + + + P +PH EEV+ +LP
Sbjct: 756 ILVGMTKLLTPFLPHTTEEVWEYLP 780
Score = 263 bits (671), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 226/399 (56%), Gaps = 17/399 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KD +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPTFVLHDGPPYANGPIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S D R +A + I+ Q+ F+ GV +W+ N Y T+
Sbjct: 99 LPIEQQLTKEGYDRKKMSTTDFRDLCLEYAKKQIDIQRKGFKRLGVSGEWD-NPYVTYAH 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY Q+ F L ++ +YR KPVYWS SS +ALAE+E++YK D S+S + ++
Sbjct: 158 EYEAAQIKVFGALAEKGLLYRGKKPVYWSWSSESALAEAEVDYK-DITSQSAFYGERVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG--ANVIVAKCLVESL 245
L D + L+WTTTPW++PA++ I +YS+ + +VA LVE L
Sbjct: 217 GKGVL---DNDTYFLVWTTTPWTIPASEGIVVGADFDYSLFTHDDDPKKYVVASDLVEKL 273
Query: 246 KWTFQ-TDIEVVCDFPGQYLQDITYIHPINK-----EQRDLKLLPAGFVSSSKGTGLVHC 299
F +++ + + G + +T H + + R++ ++ FV++S GTGLVH
Sbjct: 274 SEKFGWHNVQTLKTYKGAEFEYMTAEHAFSSVDPFYKDREVLVMLGDFVTTSDGTGLVHT 333
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL- 358
AP +G DD+ + + +PV + +QG + +AGP G+ + L + D+L
Sbjct: 334 APGYGDDDYQVGIKYGLPVFAPVNDQGYQTEEAGPDFAGVFYQDSEAIALKKLEDADLLV 393
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E+ HSYP+DWRTKKP+I +A+ QWF+ ++++ + L
Sbjct: 394 LQEDVTHSYPFDWRTKKPIIFRATDQWFVSIDKMRDDIL 432
Score = 119 bits (299), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVL-WTENYQHSYPYDWRTKKPVILK 1167
+ +QG + +AGP G+ + L + D+L E+ HSYP+DWRTKKP+I +
Sbjct: 356 VNDQGYQTEEAGPDFAGVFYQDSEAIALKKLEDADLLVLQEDVTHSYPFDWRTKKPIIFR 415
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF+ ++++ + L ++ V + P K LR+ + R W ISRQRVWGVP+P+FY
Sbjct: 416 ATDQWFVSIDKMRDDILKAVDEVTYYPAWGKTRLRNMLRDRGDWVISRQRVWGVPLPIFY 475
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ + I H L ++G + W+ + LL
Sbjct: 476 AEDGTPIMTKETIDHVSDLFRQYGSNVWFDRDAKDLL 512
>gi|242373479|ref|ZP_04819053.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
gi|242348842|gb|EES40444.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
Length = 916
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 216/622 (34%), Positives = 324/622 (52%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDPDAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTD---IDVVCDFPGQYLQDITYIHPINK 532
+P L+Y +V G I+A+ L E + + D I + +F G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGQKYIIAEALSETVAEALEWDKESIQLEKEFTGKELEYVEAQHPF-- 302
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R ++ V++ GTG VH AP HG+DD+++ ++PV++ + ++G ++ + G
Sbjct: 303 LDRVSLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPLDDKGVFTEEGGQ- 361
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EG+ K L E L N+ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 FEGMFYDKANKAVTDLLTEKGALLKLNFITHSYPHDWRTKKPVIFRATPQWFASISKVRQ 421
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
+ L +E+ +F + K + + I R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 422 DILDAIEDTDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-V 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHIADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+
Sbjct: 541 NRPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++++ T I VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDYNPETDRIPENDLLDVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 156/400 (39%), Positives = 232/400 (58%), Gaps = 22/400 (5%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y E G +ILHDGPPYANG+ H+GHA+NKI+KD +R +QG YVPGWD
Sbjct: 37 YQKALEKNKGNQSYILHDGPPYANGSLHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDT 96
Query: 68 HGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE +A+T K K +S + R+K K FAL+ ++ QK +F+ GV D+ +N Y T
Sbjct: 97 HGLPIE-QALTKKGVDRKKMSIAEFREKCKEFALKQVDIQKKDFKRLGVRGDF-NNPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
EY Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 155 LTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFD 213
Query: 185 LNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL- 241
+ +G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L
Sbjct: 214 VKDD-----KGVVDPDAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGQKYIIAEALS 268
Query: 242 ---VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+L+W ++ I++ +F G+ L+ + HP R ++ V++ GTG VH
Sbjct: 269 ETVAEALEWDKES-IQLEKEFTGKELEYVEAQHPF--LDRVSLVINGDHVTTDAGTGCVH 325
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG+DD+++ ++PV++ + ++G ++ + G EG+ K L E L
Sbjct: 326 TAPGHGEDDYIVGQKYELPVISPLDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGAL 384
Query: 359 WTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
N+ HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 385 LKLNFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + G EG+ K L E L N+ HSYP+DWRTKKPVI +
Sbjct: 349 LDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLNFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E +F + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIEDTDFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHIADLFAEHGSNIWFEREAKDLL 504
>gi|403379006|ref|ZP_10921063.1| protein IleS [Paenibacillus sp. JC66]
Length = 923
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/620 (33%), Positives = 319/620 (51%), Gaps = 57/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK + S SIY+ + L E D +IWTTTPW+LPAN I+ +
Sbjct: 192 SALAEAEIEYK-EKTSPSIYVAFPVKDGKGKLPE---DAEVIIWTTTPWTLPANLGISVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINKEQRD 536
P L Y V +V G ++A+ L+E + +V+ G L+ + HP RD
Sbjct: 248 PELPYVVVNVAGRKFVLAEGLLETAAKAIGWEAYEVISTVQGSELEHVVCQHPFY--DRD 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTG VH AP HG+DDF + I VL I +QGK++ +A PG EG+
Sbjct: 306 SLVMTGDHVTLEAGTGCVHTAPGHGEDDFAVGQKYGIGVLCPIDDQGKFTSEA-PGYEGM 364
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
++ L+E +L QH Y +DWRTKKPVI +A++QWF + + + L
Sbjct: 365 -FYEKANAPIMDLLEQKGRLLKQGTIQHQYAHDWRTKKPVIYRATEQWFASIDGFREKML 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+ +N+ P+ + L + IA R WCISRQR WGVPIP+FY + +VNE+ I H
Sbjct: 424 EEIRNINWTPKWGEVRLHNMIADRGDWCISRQRAWGVPIPIFYCRSCNQPLVNESTIDHI 483
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDKP 767
++ G + W++ +LL + + K DI+D+WFDSG S + VL+ +P
Sbjct: 484 ASIFAAEGSNAWFARDERELLPENTACEGCGHHEFRKETDIMDVWFDSGSSHAAVLRGRP 543
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GW+ SSL+TS A+ AP+R + HGF +D +G KMSKS+GN
Sbjct: 544 ELQWPADLYLEGSDQYRGWYNSSLITSTAVNGKAPYRGILSHGFTLDGEGRKMSKSLGNT 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ +K G D+LR WV++ V I
Sbjct: 604 VDP-----------------------------SKVCDRLGADILRLWVSS-VDYQADVRI 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
NIL+ + +KIR++LR+ LG LH + +D + + L +
Sbjct: 634 SDNILSQISEVYRKIRNTLRFFLGNLHGFDPRKDQVPFQEMNELDRFAIIHLNRLIEKVL 693
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +++ + + +F E+SAFY +VKDRLY ++ N R + L+ V+
Sbjct: 694 KAYDAYEFHMVYQAVHHFCAVEMSAFYLDIVKDRLYTEAPNDPGRKAAQTVLYEALTVIT 753
Query: 999 RTVAPIMPHLAEEVYSHLPS 1018
+ +API+PH ++EV+ H+P
Sbjct: 754 KLIAPILPHTSDEVWKHIPG 773
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/389 (42%), Positives = 229/389 (58%), Gaps = 17/389 (4%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
GKP+F+LHDGPPYANG HIGHA+NKILKDI +R L+G YVPGWD HGLPIE +
Sbjct: 45 QGKPKFVLHDGPPYANGDIHIGHALNKILKDIIVRYKSLRGYDAPYVPGWDTHGLPIE-Q 103
Query: 76 AITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
AI + K+ +S + R+ K +AL+ ++ Q+A+F+ GV DWE N Y T EY
Sbjct: 104 AIANSGKVDRKKMSIPEFREYCKEYALQWVDKQRAQFKRLGVRGDWE-NPYITLQPEYEA 162
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
Q+ F + + YIY+ LKPVYWSPSS +ALAE+E+EYK + S SIY+ +
Sbjct: 163 LQIRVFGEMVNKGYIYKGLKPVYWSPSSESALAEAEIEYK-EKTSPSIYVAFPVKDGKGK 221
Query: 192 LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQT 251
L E D +IWTTTPW+LPAN I+ +P L Y V +V G ++A+ L+E+
Sbjct: 222 LPE---DAEVIIWTTTPWTLPANLGISVHPELPYVVVNVAGRKFVLAEGLLETAAKAIGW 278
Query: 252 DI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL 310
+ EV+ G L+ + HP RD ++ V+ GTG VH AP HG+DDF +
Sbjct: 279 EAYEVISTVQGSELEHVVCQHPFY--DRDSLVMTGDHVTLEAGTGCVHTAPGHGEDDFAV 336
Query: 311 ALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYP 368
I VL I +QGK++ +A PG EG+ ++ L+E +L QH Y
Sbjct: 337 GQKYGIGVLCPIDDQGKFTSEA-PGYEGM-FYEKANAPIMDLLEQKGRLLKQGTIQHQYA 394
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
+DWRTKKPVI +A++QWF + + + L
Sbjct: 395 HDWRTKKPVIYRATEQWFASIDGFREKML 423
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I +QGK++ +A PG EG+ + ++ L+E +L QH Y +DWRTKKPVI
Sbjct: 348 IDDQGKFTSEA-PGYEGM-FYEKANAPIMDLLEQKGRLLKQGTIQHQYAHDWRTKKPVIY 405
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + + + L + +N+ P+ + L + IA R WCISRQR WGVPIP+F
Sbjct: 406 RATEQWFASIDGFREKMLEEIRNINWTPKWGEVRLHNMIADRGDWCISRQRAWGVPIPIF 465
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y + +VNE+ I H ++ G + W++ +LL
Sbjct: 466 YCRSCNQPLVNESTIDHIASIFAAEGSNAWFARDERELL 504
>gi|418307414|ref|ZP_12919127.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
gi|365245681|gb|EHM86297.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
Length = 917
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 219/623 (35%), Positives = 323/623 (51%), Gaps = 64/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +GA D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGAVDSDAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G IVA+ L E L W + I + +F G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVDGQKYIVAEALSDAVAEALGWD-KDSIKLEKEFSGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRKSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
+ L +E NF K + + + R W ISRQRVWGVP+PVFY +GD I+ E
Sbjct: 421 KDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET- 479
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
+ H L EHG + W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 480 VNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVL 539
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ T+VA + +P++ + HGFV+D +G KMSKS
Sbjct: 540 ETRPELSFPADMYLEGSDQYRGWFNSSITTAVATRGVSPYKFLLSHGFVMDGEGKKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + + G D+ R WV++
Sbjct: 600 LGNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLA 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQ 934
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 630 DVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFT 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 690 ASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 750 VDMTKLLAPILVHTAEEVWSHTP 772
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/395 (40%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+GA D A +IWTTTPW++P+N I +P L+Y +V G IVA+ L E
Sbjct: 218 ----KGAVDSDAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGQKYIVAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP H
Sbjct: 274 ALGWD-KDSIKLEKEFSGKELEYVVAQHPF--LDRKSLVINGEHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRKDIL 424
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRKDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFAEHGSNIWFEREAKDLL 504
>gi|224369583|ref|YP_002603747.1| protein IleS [Desulfobacterium autotrophicum HRM2]
gi|223692300|gb|ACN15583.1| IleS [Desulfobacterium autotrophicum HRM2]
Length = 936
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 221/627 (35%), Positives = 325/627 (51%), Gaps = 57/627 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
TALAE+E+EYK D S SIY+K + + LL D +IWTTTPW++PAN +
Sbjct: 192 TALAEAEIEYK-DIGSPSIYVKFAVKDDLSRLLPALKDKETSFVIWTTTPWTIPANLGVC 250
Query: 476 FNPALEYSVASVKGANV-IVAKCLVENLKWTFQTDIDV-VCDFPGQYLQDITYIHPINKE 533
+P YS + V I+AK LVE + TF D + D + L++ HP+
Sbjct: 251 LHPEFIYSAVETQNHGVLILAKELVEQVMATFNIDTYTNLGDLDAKDLENTKCSHPLYG- 309
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD ++ V+ GTG VH AP HG DD ++ L + + + + G +S D
Sbjct: 310 -RDSLVILGEHVTLEAGTGCVHTAPGHGADDHVVGLKYGLEPYSPVLDNGCFSDDVEE-F 367
Query: 594 EGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERI--K 650
+G I K V L L EN HSYP+ WR KKPVI +A+ QWFI +++ +
Sbjct: 368 KGQFIFKANKGIVERLDNLGALIKQENITHSYPHCWRCKKPVIFRATPQWFISMDKLDLR 427
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
++LA ++ VN++P K + I RP WC+SRQR WGVPIPVF+ I V +
Sbjct: 428 KKSLAEIDNVNWIPAWGKARIYSMIENRPDWCLSRQRSWGVPIPVFHCESCGEIYVTRES 487
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVL 763
+ +L H D W+ + L+ V TK ++ILD+WFDSG+S + VL
Sbjct: 488 VDKIHSLFTAHSSDIWFEWEAKDLMPEGAVCKSCGKDKFTKDHNILDVWFDSGVSHAAVL 547
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+++ PA +Y+EG DQ GWF SSLLT+V AP+++V HGFVVD +G KMSKS
Sbjct: 548 EEREGLERPADLYLEGSDQHRGWFHSSLLTAVGRTGKAPYKSVLTHGFVVDSQGKKMSKS 607
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
VGNV++ I + A+G D+LR WVA+ +D
Sbjct: 608 VGNVVAPEKI-----------------------------IKAHGADILRLWVASADYRD- 637
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V I NI+N D ++IR++ R++LG L + + + + +D ++L RL +
Sbjct: 638 DVRISDNIVNQLSDAYRRIRNTCRFMLGNLSDFNPAVDARPVENMEGLDRFILHRLNQVL 697
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
Y +++ L NF V +LSAFY ++KDRLY AR ++ I
Sbjct: 698 ERCLGAYDTYEFHTIHHSLHNFCVVDLSAFYLDIIKDRLYTSPATDTARRDAQTAMYLIL 757
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQG 1021
+ R +API+P AEE+++++P QG
Sbjct: 758 DSITRLMAPILPFTAEEIWTYMPEVQG 784
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 218/396 (55%), Gaps = 13/396 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
S LY R++ GKP+FILHDGPPYANG HIGHA+NKILKDI +RS + G YVPG
Sbjct: 34 SGLYQKIRQSSKGKPKFILHDGPPYANGHLHIGHAINKILKDIIIRSKQMAGFDAPYVPG 93
Query: 65 WDCHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WDCHGLPIE K + SK ++P+ +R+ + +A ++ Q+ EF+ +GV +W+
Sbjct: 94 WDCHGLPIEHNVDKKLGSKKADMTPVQVRQACREYAKGFVDIQREEFKRFGVAGEWDEP- 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T +K Y + Q ++ KP+YW S +TALAE+E+EYK D S SIY+
Sbjct: 153 YLTMNKAYEARIAKECGEFALQGDMFLGKKPIYWCCSCQTALAEAEIEYK-DIGSPSIYV 211
Query: 182 KIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IVA 238
K + + LL D +IWTTTPW++PAN + +P YS + V I+A
Sbjct: 212 KFAVKDDLSRLLPALKDKETSFVIWTTTPWTIPANLGVCLHPEFIYSAVETQNHGVLILA 271
Query: 239 KCLVESLKWTFQTDIEV-VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
K LVE + TF D + D + L++ HP+ RD ++ V+ GTG V
Sbjct: 272 KELVEQVMATFNIDTYTNLGDLDAKDLENTKCSHPLY--GRDSLVILGEHVTLEAGTGCV 329
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H AP HG DD ++ L + + + + G +S D +G I K V L
Sbjct: 330 HTAPGHGADDHVVGLKYGLEPYSPVLDNGCFSDDV-EEFKGQFIFKANKGIVERLDNLGA 388
Query: 358 LWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERI 392
L EN HSYP+ WR KKPVI +A+ QWFI +++
Sbjct: 389 LIKQENITHSYPHCWRCKKPVIFRATPQWFISMDKL 424
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 1148 ENYQHSYPYDWRTKKPVILKASQQWFIDTERI--KPEALACLEGVNFVPESAKKSLRDQI 1205
EN HSYP+ WR KKPVI +A+ QWFI +++ + ++LA ++ VN++P K + I
Sbjct: 393 ENITHSYPHCWRCKKPVIFRATPQWFISMDKLDLRKKSLAEIDNVNWIPAWGKARIYSMI 452
Query: 1206 AQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
RP WC+SRQR WGVPIPVF+ I V ++ +L H D W+ + L+
Sbjct: 453 ENRPDWCLSRQRSWGVPIPVFHCESCGEIYVTRESVDKIHSLFTAHSSDIWFEWEAKDLM 512
Query: 1264 NTSDVNSNVTK 1274
V + K
Sbjct: 513 PEGAVCKSCGK 523
>gi|300361465|ref|ZP_07057642.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
gi|300354084|gb|EFJ69955.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
Length = 934
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/625 (33%), Positives = 320/625 (51%), Gaps = 64/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIEDGKGIL---DSDTSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +Y V V G ++ + E+L W D V+ G +TY HP+ +
Sbjct: 247 PKFDYVVVEVNGKKYVIGADRLSAVAEDLGWK---DYKVLKTLKGTDFDRMTYRHPLYGK 303
Query: 534 QRDLK----LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
L ++ +V+ GTGLVH A G+DD+ + + V + QG+++ +
Sbjct: 304 TTGLGQYGLVMNDTYVTDDDGTGLVHNATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEV 363
Query: 590 -GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDT 646
P L G+ D V +E +L + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 364 PDPDLVGM-FYDDANKVVADKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASV 422
Query: 647 ERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVN 705
++ + + LA +E+ +F+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 423 DKFRDQILAEIEKASFIPTWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVT 482
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWS 760
I+H + ++ G + W++ + E+LL + N K DILD+WFDSG SW+
Sbjct: 483 PETIEHVAQIFEKEGSNAWYTHTAEELLPKGFKSEHSPNGKFRKETDILDVWFDSGSSWA 542
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V+K++ PA +Y+EG DQ GWF SL+TSVA+ AP++ V GFV+D+KG KM
Sbjct: 543 GVMKERDGLGFPADLYLEGSDQYRGWFNLSLITSVAVTGKAPYKQVLSQGFVLDDKGHKM 602
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNVIS +D+ + G +++R WVA A
Sbjct: 603 SKSLGNVISPNDVVK-----------------------------QMGAEIIRLWVAG-AD 632
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLC 931
V + ++IL S + +KIR+++R++L + SI+ VD YM +L
Sbjct: 633 TTSDVAVSQDILRQSAESYRKIRNTMRFMLANTTDFDPKQNSIAYPDMSGVDQYMEIKLN 692
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
Y +F + + + +F+ N+LSAFY KD LY D + E R S ++
Sbjct: 693 RLIEEAIETYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDVLYIDPEDSETRRSMQTVIY 752
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHL 1016
++ L + + PI+PH EEV+ +L
Sbjct: 753 DVLVKLTKLMTPILPHTMEEVWGYL 777
Score = 230 bits (587), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 212/402 (52%), Gaps = 23/402 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA E + Q +F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKSMDRAKYRELCRQFAEEQVKKQMTDFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
++ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 158 KFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIED 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA----KCLVE 243
L +D +IWTTTPW++P+N I NP +Y V V G ++ + E
Sbjct: 217 GKGIL---DSDTSLVIWTTTPWTIPSNVGITVNPKFDYVVVEVNGKKYVIGADRLSAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK----LLPAGFVSSSKGTGLVHC 299
L W D +V+ G +TY HP+ + L ++ +V+ GTGLVH
Sbjct: 274 DLGW---KDYKVLKTLKGTDFDRMTYRHPLYGKTTGLGQYGLVMNDTYVTDDDGTGLVHN 330
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--D 356
A G+DD+ + + V + QG+++ + P L G+ D V +E
Sbjct: 331 ATGFGEDDYNVGRRYGLAVFGPMDAQGRFTKEVPDPDLVGM-FYDDANKVVADKLEKAGA 389
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
+L + HSYP+DWRTKKPVI +A+ QWF ++ + + L
Sbjct: 390 LLKLSFFTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILA 431
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + LA +E +F+P K L + I R
Sbjct: 396 FTHSYPHDWRTKKPVIYRATTQWFASVDKFRDQILAEIEKASFIPTWGKTRLYNMIKDRG 455
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ E+LL
Sbjct: 456 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTHTAEELL 510
>gi|190149313|ref|YP_001967838.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307262626|ref|ZP_07544256.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
gi|254782357|sp|B3GZN4.1|SYI_ACTP7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|189914444|gb|ACE60696.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306872049|gb|EFN03763.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
Length = 938
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 217/666 (32%), Positives = 352/666 (52%), Gaps = 70/666 (10%)
Query: 389 TERIKPEALVCKTVGNILGRVGI-THDRP-------GTALAESELEYKPDHISKSIYLKI 440
T EA + +T+G ++ + +P G++LAE+E+EY+ D +S SIY++
Sbjct: 156 TMNFDTEAHIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYE-DKVSPSIYVRF 214
Query: 441 K-LNQVPAH-----LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 494
K ++ V + +G+ + A+IWTTTPW+LP+N+ I+ NP +Y + G V++
Sbjct: 215 KAVDSVAVEAKFNAVGKGSGQISAVIWTTTPWTLPSNKAISINPEFDYQLVQFGGERVVL 274
Query: 495 AKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 553
K LVE+++ + ++V+ + G L+ + + HP + L+ V++ GTGL
Sbjct: 275 VKDLVESVQKAVGIESVEVLGEVKGDALELMQFQHPFY--DYSVPLILGDHVTTDGGTGL 332
Query: 554 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 613
VH AP HGQDDF+++ I + L+ N GK+ P GL + + + L E
Sbjct: 333 VHTAPDHGQDDFVVSKKYNIEMAGLVANDGKFISST-PFFAGLGVFESNEKVLEKLKEVG 391
Query: 614 VLWT-ENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLEEVNFVPESAKKT 670
L E +HSYP+ WR K P+I +A+ QWFI +T+ ++ +AL ++ V ++P +
Sbjct: 392 ALLKLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEAR 451
Query: 671 LRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEANIKHFCTL---IDEHGPDFWWSL 727
+ +A RP WCISRQR WGVP+ +F +T ++ ++ ++ ++E G WW L
Sbjct: 452 IDTMVANRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDL 511
Query: 728 SVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP------AHVYMEGMDQINGW 781
++L D N K D LD+WFDSG +++ V++ +P +Y+EG DQ GW
Sbjct: 512 DPVEVLGEEDAK-NYRKVPDTLDVWFDSGSTYASVVEARPEFNGNSTDMYLEGSDQHRGW 570
Query: 782 FMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKS 841
FMSSL+ S A AP++ V HGFVVDEKG KMSKS+GNVI ++ + K+
Sbjct: 571 FMSSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEV---------WNKN 621
Query: 842 VGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRS 899
G D+LR WV AS D T + + NILNS+ + ++IR+
Sbjct: 622 --------------------GADILRLWV---ASTDYTGEIAVSHNILNSAGESYRRIRN 658
Query: 900 SLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLN 955
+ R+LL L+ + +D + + E QN + Y +Q+ + L+
Sbjct: 659 TARFLLANLNGFDPKRDLVKPEEMIALDRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMR 718
Query: 956 FVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
F E+ +FY ++KDR Y + AR S L +I L+R +API+ A+E++S+
Sbjct: 719 FCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTADEIWSY 778
Query: 1016 LPSRQG 1021
LP +G
Sbjct: 779 LPQVEG 784
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 235/404 (58%), Gaps = 18/404 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY RE+ GK FILHDGPPYANG HIGHAVNKILKDI ++S G YVPGWD
Sbjct: 37 LYQKVRESSKGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWD 96
Query: 67 CHGLPIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK + ++ +S + R+ +++A E + QKA+F G+L DW+ N Y
Sbjct: 97 CHGLPIELKVEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWD-NPYL 155
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + + + + + ++Y+ KPV+W ++LAE+E+EY+ D VS SIY++
Sbjct: 156 TMNFDTEAHIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYE-DKVSPSIYVRF 214
Query: 184 K-LNQVPAH-----LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 237
K ++ V + +G+ + A+IWTTTPW+LP+N+ I+ NP +Y + G V++
Sbjct: 215 KAVDSVAVEAKFNAVGKGSGQISAVIWTTTPWTLPSNKAISINPEFDYQLVQFGGERVVL 274
Query: 238 AKCLVESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
K LVES++ + +EV+ + G L+ + + HP + L+ V++ GTGL
Sbjct: 275 VKDLVESVQKAVGIESVEVLGEVKGDALELMQFQHPFY--DYSVPLILGDHVTTDGGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP HGQDDF+++ I + L+ N GK+ P GL + + + L E
Sbjct: 333 VHTAPDHGQDDFVVSKKYNIEMAGLVANDGKFISST-PFFAGLGVFESNEKVLEKLKEVG 391
Query: 357 VLWT-ENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
L E +HSYP+ WR K P+I +A+ QWFI +T+ ++ +AL
Sbjct: 392 ALLKLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQAL 435
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPV 1164
L+ N GK+ P GL + E ++VL ++ +L E +HSYP+ WR K P+
Sbjct: 356 GLVANDGKFISST-PFFAGLGVF-ESNEKVLEKLKEVGALLKLERIKHSYPHCWRHKTPI 413
Query: 1165 ILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
I +A+ QWFI +T+ ++ +AL ++ V ++P + + +A RP WCISRQR WGVP
Sbjct: 414 IFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVANRPDWCISRQRTWGVP 473
Query: 1223 IPVFYDGDTIIVNEANIKHFCTL---IDEHGPDFWWSL-PVEQL 1262
+ +F +T ++ ++ ++ ++E G WW L PVE L
Sbjct: 474 MTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 517
>gi|73662887|ref|YP_301668.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|84029568|sp|Q49WX5.1|SYI_STAS1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|72495402|dbj|BAE18723.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 916
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 220/627 (35%), Positives = 336/627 (53%), Gaps = 72/627 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQF 473
++LAE+E+EY+ D S SIY V +++G D +IWTTTPW+LP+N
Sbjct: 191 SSLAEAEIEYQ-DKRSPSIY-------VAFDVIDGKGIVDDDAQFIIWTTTPWTLPSNVA 242
Query: 474 IAFNPALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
I +P L Y +V G I+ K L E L W T +++ +F G+ L+ I HP
Sbjct: 243 ITVHPDLTYGQYNVNGKKYIIGKDLASDVAEALDWDEDT-LELEKEFKGKDLEYIKAQHP 301
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
R+ ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ +A
Sbjct: 302 FF--DRESLVINGLHVTTDAGTGCVHTAPGHGEDDYIVGQKYNLPVISPVDDKGVFTDEA 359
Query: 590 GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G EG+ ++ L++ D +L E HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 360 GQ-FEGM-FYDKANKEITDLLKEDGSLLKLEFITHSYPHDWRTKKPVIFRATPQWFASID 417
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVN 705
+++ + L+ +++ F + K + + I R W ISRQRVWGVP+PVFY +GD I+ +
Sbjct: 418 KVREDILSAIDDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTS 477
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWS 760
E + H L + +G + W+ + LL + N TK DI+D+WFDSG S
Sbjct: 478 ET-VNHVADLFEANGSNIWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHR 536
Query: 761 HVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
VL+ +P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KM
Sbjct: 537 GVLEARPELSYPADLYLEGSDQYRGWFNSSITTSVATRGQSPYKMLLSHGFVMDGEGKKM 596
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNVI I + G D+ R WV++
Sbjct: 597 SKSLGNVIVPDQIVKQK-----------------------------GADIARLWVSS-VD 626
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLC 931
V I IL S D +KIR++LR++LG + +++ +T +I+ VD Y+L RL
Sbjct: 627 YLADVRISDEILKQSSDVYRKIRNTLRFMLGNVSDYNPATDAIAEKDLLEVDKYLLNRLR 686
Query: 932 EFQ-NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
EF NT+D Y + Y + + NF+ ELS FY KD LY + + R S L
Sbjct: 687 EFTANTLDH-YDNYDYLDIYQEVQNFINVELSNFYLDYGKDILYIEERDSHKRRSMQTVL 745
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I + + +API+ H AEEV+SH+P
Sbjct: 746 YQIVVDMTKLLAPILVHTAEEVWSHIP 772
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 231/394 (58%), Gaps = 28/394 (7%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G P FILHDGPPYANG H+GHA+NKILKDI R + G YVPGWD HGLPIE +A
Sbjct: 46 GNPSFILHDGPPYANGNLHMGHALNKILKDIITRYKSMLGYYAPYVPGWDTHGLPIE-QA 104
Query: 77 ITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+T K K LS + RKK + FALE I+ QK +F+ GV D+ +N Y T EY Q
Sbjct: 105 LTKKGVKRKELSIAEFRKKCEAFALEQIDNQKKDFKRLGVKGDF-NNPYITLKPEYEAAQ 163
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
+ F + + IY+ KPVYWSPSS ++LAE+E+EY+ D S SIY V ++
Sbjct: 164 IRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYQ-DKRSPSIY-------VAFDVI 215
Query: 194 EGA----TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+G D +IWTTTPW+LP+N I +P L Y +V G I+ K L E+L
Sbjct: 216 DGKGIVDDDAQFIIWTTTPWTLPSNVAITVHPDLTYGQYNVNGKKYIIGKDLASDVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W T +E+ +F G+ L+ I HP R+ ++ V++ GTG VH AP HG+
Sbjct: 276 DWDEDT-LELEKEFKGKDLEYIKAQHPFF--DRESLVINGLHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD+++ +PV++ + ++G ++ +AG EG+ ++ L++ D +L E
Sbjct: 333 DDYIVGQKYNLPVISPVDDKGVFTDEAGQ-FEGM-FYDKANKEITDLLKEDGSLLKLEFI 390
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF ++++ + L
Sbjct: 391 THSYPHDWRTKKPVIFRATPQWFASIDKVREDIL 424
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +AG EG+ + ++ L++ D +L E HSYP+DWRTKKPVI
Sbjct: 349 VDDKGVFTDEAGQ-FEGM-FYDKANKEITDLLKEDGSLLKLEFITHSYPHDWRTKKPVIF 406
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++++ + L+ ++ F + K + + I R W ISRQRVWGVP+PVF
Sbjct: 407 RATPQWFASIDKVREDILSAIDDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVF 466
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +GD I+ +E + H L + +G + W+ + LL
Sbjct: 467 YAENGDIIMTSET-VNHVADLFEANGSNIWFEREAKDLL 504
>gi|451852151|gb|EMD65446.1| hypothetical protein COCSADRAFT_35497 [Cochliobolus sativus ND90Pr]
Length = 1067
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 220/645 (34%), Positives = 335/645 (51%), Gaps = 48/645 (7%)
Query: 418 TALAESELEYKPDHISKSIYLK--IKLNQV--PAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+ELEY + S + +++ +KL++ L + ++ +IWTTTPW+LPAN+
Sbjct: 227 TALAEAELEYDEGYKSLAAFVRYPVKLSEALKAGALRDVEEEVSVVIWTTTPWTLPANKA 286
Query: 474 IAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDV-VCDFPGQYLQD-ITYIH 528
IA + ++Y + G N +++A + + + + + V + G L D + Y +
Sbjct: 287 IAVHRDMQYCIVKDAGNNNELILIATSRIPEYEKILERKLQIIVSELRGSDLADQVQYEN 346
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P K ++ A FV+ S GTGLVH AP HG DD+ + + IP + + G + D
Sbjct: 347 PFQKASGLQPIIHADFVTDSSGTGLVHLAPGHGMDDYNVCMPLGIPAFAPVDDAGALTKD 406
Query: 589 AGPG----LEGL---NILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKAS 639
A P LEGL +I G + V + ++ L +NY+H YP DWRTK+PVI +A+
Sbjct: 407 AFPEQPDLLEGLPVTDIKKSGSNAVCNYLQKLGLLRAKQNYRHKYPIDWRTKEPVITRAT 466
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF + E IK ++ + V F PES + L I R WCISRQR WGVPIP Y
Sbjct: 467 EQWFANVEGIKDASMKAIANVAFKPESGRSRLESFIQGRSQWCISRQRAWGVPIPALYKV 526
Query: 698 DGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQ-LLNTSDVNSNVTKSNDILDIWFD 754
+GDT+ ++ I+H +I + G + WW+ + + S +N + D +D+WFD
Sbjct: 527 EGDTLEATMDSKVIEHIVQVIKKRGINAWWTDAPDDPAWKPSHLNGTYVRGRDTMDVWFD 586
Query: 755 SGISWSHV--LKDKP-AHVYMEGMDQINGWFMSSLLTSVALKH------TAPFRNVFLHG 805
SG SW+ + KD+P A VY+EG DQ GWF SSLLT VA + AP++ + HG
Sbjct: 587 SGTSWTLLPPQKDEPVADVYLEGTDQHRGWFQSSLLTHVATQPYSTATVKAPYKTLITHG 646
Query: 806 FVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDV 865
F +D G KMSKS+GNVIS I G + LP ++ + T+ + G D
Sbjct: 647 FTLDSDGRKMSKSLGNVISPFQIMSG-ELLPPVKRKKQKGVKQDAATKHTPTYDSMGADA 705
Query: 866 LRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS------------E 913
LR W AA + V IG+ +L S + K R + ++LLG+ S
Sbjct: 706 LRLW-AASSDYTRDVTIGQPLLMSVNQALHKYRVTFKWLLGIFSLPSCPPPFVSFNSLVP 764
Query: 914 STGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
ST D + RL + + + ++ + + L ++ +LSAFYF +KDR+
Sbjct: 765 STSDFGELTDRLAVHRLVQVSSEAHAHFAKYDFFKGLNTLNKYIAMDLSAFYFETLKDRV 824
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
Y + L L IF+ LL+ +AP+ P L EEV+ H+P+
Sbjct: 825 YTGDTSDCQTLQ--RVLGLIFYELLQMLAPVCPLLVEEVWDHVPT 867
Score = 295 bits (756), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 161/406 (39%), Positives = 241/406 (59%), Gaps = 24/406 (5%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
F LHDGPPYANG HIGHA+NKI KD+ R + QGK+V Y+PGWDCHGLPIE+KA+ ++
Sbjct: 85 FTLHDGPPYANGPLHIGHALNKITKDVICRFEVGQGKKVSYIPGWDCHGLPIEIKALQAQ 144
Query: 81 DKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
K + D +R+ A+ A TI QK+ F W V+ +WE N Y T ++ + QL F
Sbjct: 145 KKDAAQTDAVSVREAARELATRTIEEQKSGFREWAVMGEWE-NAYQTMERGFELRQLEVF 203
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK--IKLNQV--PAHLL 193
++++ +YR KPVYWSPSSRTALAE+ELEY + S + +++ +KL++ L
Sbjct: 204 KVMFEKGLVYRQFKPVYWSPSSRTALAEAELEYDEGYKSLAAFVRYPVKLSEALKAGALR 263
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCLVESLKWTFQ 250
+ ++ +IWTTTPW+LPAN+ IA + ++Y + G N +++A + + +
Sbjct: 264 DVEEEVSVVIWTTTPWTLPANKAIAVHRDMQYCIVKDAGNNNELILIATSRIPEYEKILE 323
Query: 251 TDIE-VVCDFPGQYLQD-ITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF 308
++ +V + G L D + Y +P K ++ A FV+ S GTGLVH AP HG DD+
Sbjct: 324 RKLQIIVSELRGSDLADQVQYENPFQKASGLQPIIHADFVTDSSGTGLVHLAPGHGMDDY 383
Query: 309 LLALAEKIPVLNLITNQGKYSPDAGPG----LEGL---NILGDGKDQVLHLVEPDVLW-- 359
+ + IP + + G + DA P LEGL +I G + V + ++ L
Sbjct: 384 NVCMPLGIPAFAPVDDAGALTKDAFPEQPDLLEGLPVTDIKKSGSNAVCNYLQKLGLLRA 443
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
+NY+H YP DWRTK+PVI +A++QWF + E IK ++ K + N+
Sbjct: 444 KQNYRHKYPIDWRTKEPVITRATEQWFANVEGIKDASM--KAIANV 487
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 1117 PDAGPGLEGLNILGEGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFI 1174
PD GL +I G + V + ++ L +NY+H YP DWRTK+PVI +A++QWF
Sbjct: 412 PDLLEGLPVTDIKKSGSNAVCNYLQKLGLLRAKQNYRHKYPIDWRTKEPVITRATEQWFA 471
Query: 1175 DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTI 1232
+ E IK ++ + V F PES + L I R WCISRQR WGVPIP Y +GDT+
Sbjct: 472 NVEGIKDASMKAIANVAFKPESGRSRLESFIQGRSQWCISRQRAWGVPIPALYKVEGDTL 531
Query: 1233 --IVNEANIKHFCTLIDEHGPDFWWS 1256
++ I+H +I + G + WW+
Sbjct: 532 EATMDSKVIEHIVQVIKKRGINAWWT 557
>gi|431741881|ref|ZP_19530781.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2039]
gi|430601034|gb|ELB38656.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2039]
Length = 932
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 338/643 (52%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I ++ +F GQ ++ +T HP
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWENVTILKEFAGQEMEYMTASHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 302 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 359
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 360 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 478 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 537
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 538 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 598 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM+ RL +
Sbjct: 628 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMIVRLNQVI 687
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 688 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 748 AVALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 789
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 238/398 (59%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NQIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+ +F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQREDFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ ++ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQTEIGWENVTILKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|297208165|ref|ZP_06924595.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300912243|ref|ZP_07129686.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
gi|296886904|gb|EFH25807.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886489|gb|EFK81691.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
Length = 920
Score = 346 bits (888), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 323/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 194 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 247
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 248 VHPELKYGQYNVDGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 305
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 306 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 364
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 365 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 423
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 424 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 483
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 484 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 543
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 544 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 603
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 604 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 633
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF
Sbjct: 634 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSITESELLEVDRYLLNRLREFTA 693
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 694 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 753
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 754 DMTKLLAPILVHTAEEVWSHTP 775
Score = 269 bits (687), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 45 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 104
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 105 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 162
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 163 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 220
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 221 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGEKYIIAEALSDAVAE 276
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 277 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 333
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 334 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 392
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 393 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 427
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 352 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 410
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 411 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 470
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 471 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 507
>gi|404418423|ref|ZP_11000190.1| isoleucyl-tRNA ligase [Staphylococcus arlettae CVD059]
gi|403489016|gb|EJY94594.1| isoleucyl-tRNA ligase [Staphylococcus arlettae CVD059]
Length = 916
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 213/621 (34%), Positives = 328/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + D +IWTTTPW+LP+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDGKGIV---DNDAKFIIWTTTPWTLPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLVEN----LKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L Y+ V G IV K L+ + L+W + +I++ +F G L+ + HP
Sbjct: 247 PDLTYAQYKVNGEKYIVGKDLISDVVNQLEWD-ENEIELEKEFRGSELEYVEAQHPFM-- 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ +AG
Sbjct: 304 DRTSVVINGTHVTTDAGTGCVHTAPGHGEDDYIVGQKYNLPVISPVNDKGVFTEEAGQ-F 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EGL K+ L E L E HSYP+DWRTKKPVI +A+ QWF ++++ +
Sbjct: 363 EGLFYDKANKEITDLLKEKHALLKLEFITHSYPHDWRTKKPVIFRATPQWFASIDKVRSD 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
LA +E+ +F + K + + I R W ISRQRVWGVP+PVFY +G+ +I E +
Sbjct: 423 ILAAVEDTHFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGEPVITTET-VN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L++++G + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 482 HVADLVEQYGSNVWFEREAKDLLPEGFTHEGSPNGTFTKETDIMDVWFDSGSSHRGVLEA 541
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y+EG DQ GWF SS+ T+VA + +P++ + HGFV+D +G KMSKS+G
Sbjct: 542 RPELSFPADLYLEGSDQYRGWFNSSITTAVATRAQSPYKMLLSHGFVMDGEGKKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N I I + G D+ R WV++ V
Sbjct: 602 NTIVPDQIVKQK-----------------------------GADIARLWVSS-VDYLADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I IL + D +KIR++LR++LG +++ + T ++ +D Y+L RL EF +
Sbjct: 632 RISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPETDALPETELLEIDQYLLNRLREFTAS 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y F Y + + NF+ ELS FY KD LY ++ + R S L+ I
Sbjct: 692 TIEHYDNFDYLDIYQEVQNFINVELSNFYLDYGKDILYIEAQDAHKRRSMQTVLYQIIVD 751
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH+P
Sbjct: 752 MTKLLAPILAHTAEEVWSHIP 772
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 221/388 (56%), Gaps = 16/388 (4%)
Query: 19 PEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE--LKA 76
P +ILHDGPPYANG+ H+GHA+NKILKDI R +QG YVPGWD HGLPIE L
Sbjct: 48 PSYILHDGPPYANGSLHMGHALNKILKDIITRYKTMQGFYTPYVPGWDTHGLPIEQALAK 107
Query: 77 ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
K K +S D RKK + FALE I QK +F+ GV D+ +N Y T EY QL
Sbjct: 108 KGVKRKEMSISDFRKKCEAFALEQIELQKKDFKRLGVKGDF-NNPYITLKPEYEAAQLRL 166
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ + +
Sbjct: 167 FGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDGKGIV---D 222
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTFQTD 252
D +IWTTTPW+LP+N I +P L Y+ V G IV K L V L+W + +
Sbjct: 223 NDAKFIIWTTTPWTLPSNVAITVHPDLTYAQYKVNGEKYIVGKDLISDVVNQLEWD-ENE 281
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
IE+ +F G L+ + HP R ++ V++ GTG VH AP HG+DD+++
Sbjct: 282 IELEKEFRGSELEYVEAQHPFM--DRTSVVINGTHVTTDAGTGCVHTAPGHGEDDYIVGQ 339
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDW 371
+PV++ + ++G ++ +AG EGL K+ L E L E HSYP+DW
Sbjct: 340 KYNLPVISPVNDKGVFTEEAGQ-FEGLFYDKANKEITDLLKEKHALLKLEFITHSYPHDW 398
Query: 372 RTKKPVILKASQQWFIDTERIKPEALVC 399
RTKKPVI +A+ QWF ++++ + L
Sbjct: 399 RTKKPVIFRATPQWFASIDKVRSDILAA 426
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
+ ++G ++ +AG EGL K+ L E L E HSYP+DWRTKKPVI +
Sbjct: 349 VNDKGVFTEEAGQ-FEGLFYDKANKEITDLLKEKHALLKLEFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++++ + LA +E +F + K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASIDKVRSDILAAVEDTHFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ +I E + H L++++G + W+ + LL
Sbjct: 468 AENGEPVITTET-VNHVADLVEQYGSNVWFEREAKDLL 504
>gi|288574922|ref|ZP_06393279.1| isoleucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570663|gb|EFC92220.1| isoleucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 924
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 215/620 (34%), Positives = 331/620 (53%), Gaps = 55/620 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA-TDLHALIWTTTPWSLPANQFIAF 476
TALA +E+EY D S SIY+ + V + E A D++ ++WTTTPW+LPA+ +A
Sbjct: 194 TALAAAEIEYG-DETSPSIYVAYSMPDVAERIPEVAGRDVNVIVWTTTPWTLPASMAVAI 252
Query: 477 NPALEYSVASVKGANVIVAKCLVENL-KWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
+PA EY + ++AK L+ ++ K T T + + G L+ + +HP E R
Sbjct: 253 HPAYEYVFVPSGDSVYLLAKALIADVEKTTGMTFGEPLATVKGAELEKVEAVHPFY-EDR 311
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+L A +V GTG VH AP HG +D+ + I V N + G+Y P+ P + G
Sbjct: 312 KTPVLLADYVVLDTGTGCVHTAPGHGVEDYETGVRYGIEVYNPVDPTGRYLPET-PLVGG 370
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ L +G VL + + +L HSYP+ WR KKPVI +++ QWF++ + + +A
Sbjct: 371 MT-LDEGASLVLKTLTNNGRLLGQLEILHSYPHCWRCKKPVIFRSTDQWFVNVAQFRQQA 429
Query: 654 LACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +E EV ++P+ K + + + R WCISRQRVWGVPIPVFY D ++++ I+
Sbjct: 430 LDVIENEVKWIPDWGKDRIYNMVRDRSDWCISRQRVWGVPIPVFYCQDCGKMLLDPDAIR 489
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNT-----SDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
+ E G D WW S E+LL S + N+ K DI+D+WFDSGIS VL++
Sbjct: 490 LVQQKVKERGGDVWWQESPEELLGDLCKCPSCGSGNLKKEKDIMDVWFDSGISHFAVLEN 549
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y+EG DQ GWF +SLLTSVA + AP++ V HGF+VD KG KMSKS+G
Sbjct: 550 RPELSWPADLYLEGSDQHRGWFQTSLLTSVATRGVAPYKAVLTHGFIVDGKGKKMSKSIG 609
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NV++ +I + G D+LR WVA+ K+ +
Sbjct: 610 NVVAPQEI-----------------------------IDTNGADILRLWVASTDYKN-DI 639
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I K I+ + ++ ++IR++ R+LLG L + + ST +S D ++L RL
Sbjct: 640 RISKTIIRTLSEEYRRIRNTARFLLGNLCDFNPSTDFVSEAEMSSFDRWILSRLNRLIKR 699
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +++ + + F VNEL + Y KD LY D++N + R + + I
Sbjct: 700 VTKGYDSYEFHIPTVSIHQFCVNELGSLYLDAAKDSLYADALNFKGRRAIQTVMWRIVTA 759
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L +AP++ +EE++ L
Sbjct: 760 LSTMLAPVLSFTSEEIWREL 779
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 229/399 (57%), Gaps = 12/399 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+L+S + KP FILHDGPPYANG HIG A NKI+KD ++ ++G R YVPGW
Sbjct: 37 DLHSLMLKKNEDKPSFILHDGPPYANGDIHIGTAFNKIIKDFIVKFKSMRGYRCPYVPGW 96
Query: 66 DCHGLPIELKAITSK--DK-LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIELK + + DK + P+++R++ ++AL +++Q+++F G + DWE N Y
Sbjct: 97 DTHGLPIELKVLKGEGVDKDSIDPVELRRRCTDYALGFLDSQRSQFRRLGGVGDWE-NPY 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F ++ ++ +Y+ KPVYW +TALA +E+EY D S SIY+
Sbjct: 156 ITLKPEYEAAQIGVFADMVEKGLVYKGQKPVYWCIDCQTALAAAEIEYG-DETSPSIYVA 214
Query: 183 IKLNQVPAHLLEGA-TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ V + E A D++ ++WTTTPW+LPA+ +A +PA EY + ++AK L
Sbjct: 215 YSMPDVAERIPEVAGRDVNVIVWTTTPWTLPASMAVAIHPAYEYVFVPSGDSVYLLAKAL 274
Query: 242 VESL-KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
+ + K T T E + G L+ + +HP E R +L A +V GTG VH A
Sbjct: 275 IADVEKTTGMTFGEPLATVKGAELEKVEAVHPFY-EDRKTPVLLADYVVLDTGTGCVHTA 333
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VL 358
P HG +D+ + I V N + G+Y P+ P + G+ L +G VL + + +L
Sbjct: 334 PGHGVEDYETGVRYGIEVYNPVDPTGRYLPET-PLVGGMT-LDEGASLVLKTLTNNGRLL 391
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+ WR KKPVI +++ QWF++ + + +AL
Sbjct: 392 GQLEILHSYPHCWRCKKPVIFRSTDQWFVNVAQFRQQAL 430
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPV 1164
N + G+Y P+ P + G+ L EG VL + + +L HSYP+ WR KKPV
Sbjct: 353 NPVDPTGRYLPET-PLVGGMT-LDEGASLVLKTLTNNGRLLGQLEILHSYPHCWRCKKPV 410
Query: 1165 ILKASQQWFIDTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +++ QWF++ + + +AL +E V ++P+ K + + + R WCISRQRVWGVPI
Sbjct: 411 IFRSTDQWFVNVAQFRQQALDVIENEVKWIPDWGKDRIYNMVRDRSDWCISRQRVWGVPI 470
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
PVFY D ++++ I+ + E G D WW E+LL
Sbjct: 471 PVFYCQDCGKMLLDPDAIRLVQQKVKERGGDVWWQESPEELLG 513
>gi|379795559|ref|YP_005325557.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872549|emb|CCE58888.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 916
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 323/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDDKGIV---DSDAKFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L+Y +V G IVA+ L E L W + I + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGQKYIVAEALSDAVAEALGWD-KDSIKLEKEFSGKELEYVVAQHPF--L 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 304 DRESLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-F 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 363 EGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRKD 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +E NF K + + + R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 423 ILDAIESTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 482 HVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLET 541
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y+EG DQ GWF SS+ T+VA + +P++ + HGFV+D +G KMSKS+G
Sbjct: 542 RPELRFPADMYLEGSDQYRGWFNSSITTAVATRGVSPYKFLLSHGFVMDGEGKKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI + + G D+ R WV++ V
Sbjct: 602 NVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I +IL + D +KIR++LR++LG +++ + T S+ VD Y+L RL EF +
Sbjct: 632 RISDDILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPESELLEVDRYLLNRLREFTAS 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 692 TINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVD 751
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 752 MTKLLAPILVHTAEEVWSHTP 772
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 226/393 (57%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDDK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GIV---DSDAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGQKYIVAEALSDAVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R+ ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIKLEKEFSGKELEYVVAQHPF--LDRESLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 333 DDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASISKVRKDIL 424
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRKDILDAIESTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFAEHGSNIWFEREAKDLL 504
>gi|326693770|ref|ZP_08230775.1| isoleucyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
Length = 930
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 217/628 (34%), Positives = 329/628 (52%), Gaps = 58/628 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L +D + ++WTTTP+++ A++ I
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKGIL---DSDTYLVVWTTTPFTVTASRGITLG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQ 534
P ++Y V +G +VA +E + F D +V+ + G+ L IT HP +++
Sbjct: 247 PDMDYVVVQPEGETRKFVVAAGRLEAIAPKFGWDKYEVLATYKGRELDRITAYHPWDEDV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L ++ V+ GTGLVH AP G+DDF + A + V + +G + +AG E
Sbjct: 307 EEL-VMNGDHVTLDSGTGLVHTAPGFGEDDFNVGKAYGLEVAVTVDEKGYMTKNAGADFE 365
Query: 595 GLNILGDGKDQVLH-LVEPDV-LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G D V++ L E ++ L E HSYP+DWRTKKP+I +A QWF E+ +
Sbjct: 366 G-KFYDDVVGLVINKLSEANLFLGKEKITHSYPFDWRTKKPIIWRAVPQWFASVEKFRQN 424
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L L+ VNF PE KK L + I R W ISRQRVWGVP+P+FY D T I+++ I H
Sbjct: 425 ILDELDNVNFYPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIFYAEDQTPILDQVVINH 484
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK-- 764
L ++HG ++W+ + LL N N TK DI+D+WFDSG SW+ V+
Sbjct: 485 VADLFEKHGSNYWFEHEAKDLLPEGYTNEHSPNGIFTKEEDIMDVWFDSGSSWAGVMDTR 544
Query: 765 ---DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
D PA +Y+EG DQ GWF SSL+TSVA AP++NV GF +D KG KMSKS+GN
Sbjct: 545 EHLDYPADLYLEGSDQYRGWFNSSLITSVAATGHAPYKNVLSQGFTLDGKGNKMSKSLGN 604
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW-VAAHASKDPTV 880
IS D+ G+++LR W ++ S+D +
Sbjct: 605 TISPLDVAD-----------------------------QMGIEILRLWTISVDTSQD--M 633
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSI----SRYVDVYMLKRLCEFQNT 936
P+ IL + +K+R++LR+L+ + + +T ++ D Y L F
Sbjct: 634 PVSNEILKQVSESYRKLRNTLRFLMANTSDFNYATDAVPFADRAGHDQYFSVLLNNFVKD 693
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +Q+ + ++NFV +LSAFY + KD +Y ++ G AR S +
Sbjct: 694 IRGYYDNYQFNDIFKRMINFVNVDLSAFYLDIAKDVVYVEAPTGHARRSMQTVFYETLLA 753
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTFS 1024
L + + PI+PH AEEV+ +LP+ F+
Sbjct: 754 LTKLMLPILPHTAEEVWEYLPNETAAFA 781
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/387 (39%), Positives = 217/387 (56%), Gaps = 14/387 (3%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE--LK 75
KP F LHDGPPYANG H+GHA+NKI KDI +R + G YVPGWD HGLPIE L
Sbjct: 47 KPHFNLHDGPPYANGNIHLGHALNKISKDIIVRYKNMAGFYAPYVPGWDTHGLPIEQQLT 106
Query: 76 AITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
K + R AK FALE ++ Q+ +F+ G++ADWE N Y T E+ Q+
Sbjct: 107 KAGHDRKSMPKAAWRDLAKAFALEQVDKQRQDFKRLGIMADWE-NPYITLQPEFEAAQVR 165
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG 195
F + + YI++ KPVYWS SS +ALAE+E+EY D S S+Y ++ L
Sbjct: 166 VFGEMAGKGYIFKGSKPVYWSWSSESALAEAEIEYH-DIDSTSLYYANRVKDGKGIL--- 221
Query: 196 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESLKWTFQTD- 252
+D + ++WTTTP+++ A++ I P ++Y V +G +VA +E++ F D
Sbjct: 222 DSDTYLVVWTTTPFTVTASRGITLGPDMDYVVVQPEGETRKFVVAAGRLEAIAPKFGWDK 281
Query: 253 IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLAL 312
EV+ + G+ L IT HP +++ +L ++ V+ GTGLVH AP G+DDF +
Sbjct: 282 YEVLATYKGRELDRITAYHPWDEDVEEL-VMNGDHVTLDSGTGLVHTAPGFGEDDFNVGK 340
Query: 313 AEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH-LVEPDV-LWTENYQHSYPYD 370
A + V + +G + +AG EG D V++ L E ++ L E HSYP+D
Sbjct: 341 AYGLEVAVTVDEKGYMTKNAGADFEG-KFYDDVVGLVINKLSEANLFLGKEKITHSYPFD 399
Query: 371 WRTKKPVILKASQQWFIDTERIKPEAL 397
WRTKKP+I +A QWF E+ + L
Sbjct: 400 WRTKKPIIWRAVPQWFASVEKFRQNIL 426
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 92/162 (56%), Gaps = 12/162 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLV-----EPDV-LWTENYQHSYPYDWRTKK 1162
+ +G + +AG EG + D V+ LV E ++ L E HSYP+DWRTKK
Sbjct: 350 VDEKGYMTKNAGADFEG-----KFYDDVVGLVINKLSEANLFLGKEKITHSYPFDWRTKK 404
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I +A QWF E+ + L L+ VNF PE KK L + I R W ISRQRVWGVP
Sbjct: 405 PIIWRAVPQWFASVEKFRQNILDELDNVNFYPEWGKKRLYNMIRDRGDWVISRQRVWGVP 464
Query: 1223 IPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+P+FY D T I+++ I H L ++HG ++W+ + LL
Sbjct: 465 LPIFYAEDQTPILDQVVINHVADLFEKHGSNYWFEHEAKDLL 506
>gi|21282805|ref|NP_645893.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49486033|ref|YP_043254.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|418934092|ref|ZP_13487916.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC128]
gi|448740327|ref|ZP_21722307.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/314250]
gi|39932218|sp|Q8NX29.1|SYI_STAAW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|81649443|sp|Q6GA19.1|SYI_STAAS RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|21204243|dbj|BAB94941.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49244476|emb|CAG42904.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|377771872|gb|EHT95626.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC128]
gi|445548972|gb|ELY17218.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/314250]
Length = 917
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 323/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVDGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSITESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|94267665|ref|ZP_01290951.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
gi|93451903|gb|EAT02631.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
Length = 946
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 228/665 (34%), Positives = 338/665 (50%), Gaps = 77/665 (11%)
Query: 395 EALVCKTVGNILGRVGITHDRP--------GTALAESELEYKPDHISKSIYLKIKLNQ-- 444
EA + + N L I+ R TALAE+E+EY H S SIY+K L
Sbjct: 161 EAAIAREFNNFLLNGAISRSRKPVHWCASCTTALAEAEVEYAEQH-SPSIYVKFPLAPAT 219
Query: 445 ----VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 500
VP L L +IWTTTPW+LPAN +A +P Y+ G +I+A LVE
Sbjct: 220 LAAAVP-ELAADQRPLAVVIWTTTPWTLPANLAVALHPDFTYAAVEHDGEILIMAAELVE 278
Query: 501 N-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 559
+ +D ++ FP L + HP+ + Q L+ A +V+ G+G VH AP
Sbjct: 279 RVMAECGLSDYKLLASFPAAALLGQSCRHPLLERQS--LLIAADYVTLESGSGCVHTAPG 336
Query: 560 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN 619
HG+DD+L L +P+L+ + +G ++ +AGP EGL IL K + L L E
Sbjct: 337 HGRDDYLSGLKHHLPILSPVDERGHFTGEAGP-YEGLFILKGNKRIIADLQAGGALLGEQ 395
Query: 620 -YQHSYPYDWRTKKPVILKASQQWFI--------DTER-IKPEALACLEEVNFVPESAKK 669
HSYP+ WR KKPV+ +A++QWFI D E+ ++ ALA ++EV ++P ++
Sbjct: 396 AITHSYPHCWRCKKPVMFRATEQWFIAMDAAAGDDPEQTLRRRALAAIDEVEWIPRWGRE 455
Query: 670 TLRDQIAQRPYWCISRQRVWGVPI-PVFYDGDTIIVNEANIKHFCT-LIDEHGPDFWWSL 727
++ +A RP WC+SRQR WGVP+ V+ ++N+ I T + G D W++
Sbjct: 456 RIQAMVAGRPDWCLSRQRSWGVPLTAVWCKACGRVLNDEKIAATITEIFTREGADAWFAR 515
Query: 728 SVEQLLN----TSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQI 778
+ + S ++ K DILD+WFDSG+S++ VL+ + PA +Y+EG DQ
Sbjct: 516 PLADFIGPDARCSCGATDFAKEEDILDVWFDSGVSFAAVLEQRDELTSPADLYLEGSDQH 575
Query: 779 NGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAY 838
GWF SSLL SV + AP++ V HGFVVD +G KMSKSVGNVI+ I +
Sbjct: 576 RGWFQSSLLASVGTRGAAPYKAVLTHGFVVDGQGKKMSKSVGNVIAPDKIIK-------- 627
Query: 839 EKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIR 898
+G ++LR W A+ +D + I +NIL D +K R
Sbjct: 628 ---------------------QHGAEILRLWAASEDYRD-DIRISENILRQLADAYRKTR 665
Query: 899 SSLRYLLGVLHN-----HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVL 953
+++R++LG LH+ H ++ +D ++L R F+ Y +F++ + L
Sbjct: 666 NTIRFMLGNLHDFEPARHRRPAEGMAE-LDRWILARFELFRQKSQESYDKFEFHQFYHQL 724
Query: 954 LNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
NF LSA Y +VKDRLY R L+ I LLR +AP++ LA E +
Sbjct: 725 YNFCTVSLSALYLDIVKDRLYILPPADPRRRDAQSVLYEICDGLLRLLAPVLSFLAAEAW 784
Query: 1014 SHLPS 1018
HLP+
Sbjct: 785 EHLPA 789
Score = 273 bits (698), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 218/393 (55%), Gaps = 17/393 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY A G+P +ILHDGPPYANG H+GHA+NKILKDI L++ + G YVPGW
Sbjct: 35 DLYGAIDRATAGRPLYILHDGPPYANGHLHMGHALNKILKDIILKAKRMSGYHCPYVPGW 94
Query: 66 DCHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
DCHGLPIEL K + SK + L R+ + +A + I Q+ EF GVLADW+ Y
Sbjct: 95 DCHGLPIELNVDKELGSKKAEVDKLAFRETCRRYAAKWIAIQREEFARLGVLADWQQP-Y 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y +F N I R KPV+W S TALAE+E+EY H S SIY+K
Sbjct: 154 LTIDYSYEAAIAREFNNFLLNGAISRSRKPVHWCASCTTALAEAEVEYAEQH-SPSIYVK 212
Query: 183 I------KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVI 236
VP L L +IWTTTPW+LPAN +A +P Y+ G +I
Sbjct: 213 FPLAPATLAAAVP-ELAADQRPLAVVIWTTTPWTLPANLAVALHPDFTYAAVEHDGEILI 271
Query: 237 VAKCLVES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTG 295
+A LVE + +D +++ FP L + HP+ + Q L+ A +V+ G+G
Sbjct: 272 MAAELVERVMAECGLSDYKLLASFPAAALLGQSCRHPLLERQS--LLIAADYVTLESGSG 329
Query: 296 LVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP 355
VH AP HG+DD+L L +P+L+ + +G ++ +AGP EGL IL K + L
Sbjct: 330 CVHTAPGHGRDDYLSGLKHHLPILSPVDERGHFTGEAGP-YEGLFILKGNKRIIADLQAG 388
Query: 356 DVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI 387
L E HSYP+ WR KKPV+ +A++QWFI
Sbjct: 389 GALLGEQAITHSYPHCWRCKKPVMFRATEQWFI 421
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 16/176 (9%)
Query: 1104 HHLNLIT---NQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWR 1159
HHL +++ +G ++ +AGP EGL IL K + L L E HSYP+ WR
Sbjct: 348 HHLPILSPVDERGHFTGEAGP-YEGLFILKGNKRIIADLQAGGALLGEQAITHSYPHCWR 406
Query: 1160 TKKPVILKASQQWFI--------DTER-IKPEALACLEGVNFVPESAKKSLRDQIAQRPY 1210
KKPV+ +A++QWFI D E+ ++ ALA ++ V ++P ++ ++ +A RP
Sbjct: 407 CKKPVMFRATEQWFIAMDAAAGDDPEQTLRRRALAAIDEVEWIPRWGRERIQAMVAGRPD 466
Query: 1211 WCISRQRVWGVPI-PVFYDGDTIIVNEANIKHFCT-LIDEHGPDFWWSLPVEQLLN 1264
WC+SRQR WGVP+ V+ ++N+ I T + G D W++ P+ +
Sbjct: 467 WCLSRQRSWGVPLTAVWCKACGRVLNDEKIAATITEIFTREGADAWFARPLADFIG 522
>gi|82750799|ref|YP_416540.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
gi|123754638|sp|Q2YXH4.1|SYI_STAAB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|82656330|emb|CAI80746.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
Length = 917
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 323/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I++ ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIELEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFLNVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + IE+ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIELEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|289209715|ref|YP_003461781.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
gi|288945346|gb|ADC73045.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
Length = 948
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 220/655 (33%), Positives = 345/655 (52%), Gaps = 67/655 (10%)
Query: 395 EALVCKTVGNILGRVGITH-DRP-------GTALAESELEYKPDHISKSIYLKIKLNQVP 446
EA + +G I R + ++P G+ALAE+E+EY+ D IS++I ++ ++
Sbjct: 169 EADTVRALGRIFKRGHVQMGEKPVHWCVDCGSALAEAEVEYE-DKISQAIDVRFRVIDDI 227
Query: 447 AHL--LEGATD----LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 500
L EGA D + +IWTTTPW+LPANQ +A +P L+Y++ + +++A+ LVE
Sbjct: 228 DFLRRFEGAKDSRGPISVVIWTTTPWTLPANQAVALHPELDYALVQLDNERLLLAEALVE 287
Query: 501 N-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 559
+ LK + VV GQ L+ +T HP R++ L+ V++ GTG VH AP
Sbjct: 288 DCLKRYSLGEGMVVARVRGQALEGLTLQHPFL--DREVPLILGDHVTTETGTGAVHTAPG 345
Query: 560 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE- 618
HGQ+D+ + L +PV N + G++ PD P G N+ + L E L
Sbjct: 346 HGQEDYAVGLKYSLPVHNPVGPDGRFLPDT-PLFAGENVHQANGHVIDVLKERGALVVAV 404
Query: 619 NYQHSYPYDWRTKKPVILKASQQWFIDTER--IKPEALACLEEVNFVPESAKKTLRDQIA 676
++HSYP+ WR K P+I +A+ QWFI +R ++ +AL + E ++P + + +
Sbjct: 405 KFEHSYPHCWRHKTPIIFRATPQWFISMDRAELRADALKAIAETRWMPNWGEARIHGMVV 464
Query: 677 QRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLSVEQLL 733
RP WCISRQR WGVPIP F +T ++ I+ I++ G + W+ L ++LL
Sbjct: 465 NRPDWCISRQRNWGVPIPFFVHRETGRLHPHTPELIESVAQRIEQAGIEAWFQLDPKELL 524
Query: 734 NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP------AHVYMEGMDQINGWFMSSLL 787
D + K ND LD+WFDSG+ S V++ +P +++EG DQ GWF SSLL
Sbjct: 525 G--DKAEDYIKLNDTLDVWFDSGVLHSTVVEKRPELGGLPVDLFLEGSDQHRGWFQSSLL 582
Query: 788 TSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVIS 847
TSVA++ AP+R V HGF VDEKG KMSKS GNV++ ++
Sbjct: 583 TSVAMRGEAPYRAVLTHGFTVDEKGEKMSKSRGNVVAPQEV------------------- 623
Query: 848 AHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGV 907
+ G D+LR WVAA + I K+IL+ + D ++IR++ R+LLG
Sbjct: 624 ----------VSTLGADILRLWVAA-TDFSGEMAISKDILDRTADAYRRIRNTTRFLLGN 672
Query: 908 LHNHSESTGSISRYVDV----YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSA 963
L+ + ++ + +++ R + Q + Y ++ + + + + NF EL +
Sbjct: 673 LNGFDPAEHALELDELLPLDRWIVARALQVQEQVTKAYDDYLFHQIYQRVHNFCSVELGS 732
Query: 964 FYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
FY ++KDR Y + AR S L+++ L R VAPI+ AEE++ LP
Sbjct: 733 FYLDVIKDRQYTTQADSRARRSAQTALYHVAEALTRWVAPILTFTAEEIWQLLPG 787
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 231/408 (56%), Gaps = 16/408 (3%)
Query: 8 YSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDC 67
Y RE G+P F+L DGPPYANG+ H+GHAVNK+LKDI ++S L G YVPGWDC
Sbjct: 45 YHRLREHCAGRPRFVLADGPPYANGSIHVGHAVNKVLKDIIVKSRTLSGFDAPYVPGWDC 104
Query: 68 HGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIELK + K +D RK + +A E ++ Q A+F+ GVL DW+H Y T
Sbjct: 105 HGLPIELKVEQNLGKAGRDVDAATFRKACREYAQEQVDGQSADFQRLGVLGDWDHP-YLT 163
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+ + + + ++K+ ++ KPV+W +ALAE+E+EY+ D +S++I ++ +
Sbjct: 164 MNYQVEADTVRALGRIFKRGHVQMGEKPVHWCVDCGSALAEAEVEYE-DKISQAIDVRFR 222
Query: 185 LNQVPAHL--LEGATD----LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA 238
+ L EGA D + +IWTTTPW+LPANQ +A +P L+Y++ + +++A
Sbjct: 223 VIDDIDFLRRFEGAKDSRGPISVVIWTTTPWTLPANQAVALHPELDYALVQLDNERLLLA 282
Query: 239 KCLVES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ LVE LK + VV GQ L+ +T HP R++ L+ V++ GTG V
Sbjct: 283 EALVEDCLKRYSLGEGMVVARVRGQALEGLTLQHPFL--DREVPLILGDHVTTETGTGAV 340
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV 357
H AP HGQ+D+ + L +PV N + G++ PD P G N+ + L E
Sbjct: 341 HTAPGHGQEDYAVGLKYSLPVHNPVGPDGRFLPDT-PLFAGENVHQANGHVIDVLKERGA 399
Query: 358 LWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGN 404
L ++HSYP+ WR K P+I +A+ QWFI +R + A K +
Sbjct: 400 LVVAVKFEHSYPHCWRHKTPIIFRATPQWFISMDRAELRADALKAIAE 447
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVI 1165
N + G++ PD P G N+ + L E L ++HSYP+ WR K P+I
Sbjct: 363 NPVGPDGRFLPDT-PLFAGENVHQANGHVIDVLKERGALVVAVKFEHSYPHCWRHKTPII 421
Query: 1166 LKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+A+ QWFI +R ++ +AL + ++P + + + RP WCISRQR WGVPI
Sbjct: 422 FRATPQWFISMDRAELRADALKAIAETRWMPNWGEARIHGMVVNRPDWCISRQRNWGVPI 481
Query: 1224 PVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLPVEQLLN 1264
P F +T ++ I+ I++ G + W+ L ++LL
Sbjct: 482 PFFVHRETGRLHPHTPELIESVAQRIEQAGIEAWFQLDPKELLG 525
>gi|418988014|ref|ZP_13535687.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1835]
gi|377719802|gb|EHT43972.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1835]
Length = 917
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 323/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVDGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI+ VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSITESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 228/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F S GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRSLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|30962529|dbj|BAC76731.1| isoleucyl-tRNA synthetase (mitochondrial) [Caenorhabditis elegans]
Length = 972
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 215/647 (33%), Positives = 320/647 (49%), Gaps = 83/647 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA-------TDLHALIWTTTPWSLPA 470
TALAESELEY H S S Y + KL + + A + ALIWTTTPW+LP
Sbjct: 230 TALAESELEYNDKHQSTSAYFRFKLINFSSSDVIWAHSEPSKISQFFALIWTTTPWTLPL 289
Query: 471 NQFIAFNPALEYSVASVKGA--------NVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQ 522
N I+ + A++YS+ VI +K L E FQ D C G
Sbjct: 290 NNAISVSSAIQYSLIQFDNEINNPTSTFYVIASKLLEE-----FQKSSDRKCKVVGT--- 341
Query: 523 DITYIHPINKEQRDLK----------LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 572
+ P N R K + V+ + GTGLVH A AHG D+ +A+++
Sbjct: 342 ----VKPANLIGRRYKSCWHNELGLPIYEGPHVTDTVGTGLVHTAFAHGFQDYDVAISKG 397
Query: 573 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKK 632
V + + ++G Y+ G L+G +LG+G+ L L+ D++ + HSYPYDWRTKK
Sbjct: 398 DRVESFVDSRGCYTRHLGHDLDGKEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKK 457
Query: 633 PVILKASQQWFIDTERIKPEALACLEEVNFVPESA--KKTLRDQIAQRPYWCISRQRVWG 690
PVI+++S+QWFID + I A L++++ + + +L+ + R WCISRQRVWG
Sbjct: 458 PVIIRSSEQWFIDVDEIGKRASMMLDDISVAAGDSDLRASLKQLVTTRKSWCISRQRVWG 517
Query: 691 VPIPVFYDGDTIIVNEANIKHFCTLI--DEHGPDFWWSLSVEQLLNT----------SDV 738
PIP D + + + + + D WW + V+++L SD+
Sbjct: 518 TPIPALVDDNGGSYTSRKLIEWVAKLTRERENTDVWWEIDVKEILENEEVRRSLEIPSDI 577
Query: 739 NSNVTKSNDILDIWFDSGISWSHVLKDKP------AHVYMEGMDQINGWFMSSLLTSVAL 792
S + K+ DI+D+W DSG++W H +D A V +EG+DQ GWF S LLTSVA+
Sbjct: 578 VSQLKKNTDIMDVWLDSGLAW-HAARDNDTEREHVADVVLEGVDQFRGWFQSLLLTSVAV 636
Query: 793 KHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDIT 852
++ P++ + +HGF +DE KMSKS+GNV+ D T +T
Sbjct: 637 QNKLPYKKIIVHGFCIDENNNKMSKSIGNVV---DPTM--------------------LT 673
Query: 853 QGAKKLPAYGVDVLRWWVAAHASKDP-TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNH 911
G+ K A G D LR+WVA S++ IG I++ V R+ R+++G
Sbjct: 674 DGSLKQKAIGADGLRFWVALSGSENAGESKIGMKIIDDVDKKVIAFRNGFRFMIGGCQGF 733
Query: 912 SESTGSIS-RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVK 970
+ +D+ ML+ Y +F++ + L F+ SA Y V+
Sbjct: 734 DGKQVKFPLKTLDIDMLQNCDAIVKRSIVNYNDFKFRTVANDLTQFLQRNFSANYVKYVR 793
Query: 971 DRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
DRLYCD + E+ +S TLH + H L ++PI+PHL+ EV HLP
Sbjct: 794 DRLYCDKVGSESHISAQFTLHRLAHNLAHIISPILPHLSSEVLQHLP 840
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 226/421 (53%), Gaps = 40/421 (9%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
G ++LYSWQ+ A F L DGPPYANG H GHA+NKILKD ++S + G RV +
Sbjct: 71 GLNDLYSWQKAARKDSEIFELLDGPPYANGEAHTGHAINKILKDFVVKSRIALGYRVLFR 130
Query: 63 PGWDCHGLPIELKAITSKDKLLS--PLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
PGWDCHGLPIELK + S PL+ R A+ A E I Q F WGV ADWE
Sbjct: 131 PGWDCHGLPIELKIGKQQGNAGSRTPLETRAAARIVADEAIGKQMNAFRRWGVTADWE-K 189
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T YV QL F L +Q +YR KPVYWSPSS TALAESELEY H S S Y
Sbjct: 190 PYVTKSPSYVAAQLDIFAKLVEQKLVYRSFKPVYWSPSSNTALAESELEYNDKHQSTSAY 249
Query: 181 LKIKLNQVPAHLLEGA-------TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA 233
+ KL + + A + ALIWTTTPW+LP N I+ + A++YS+
Sbjct: 250 FRFKLINFSSSDVIWAHSEPSKISQFFALIWTTTPWTLPLNNAISVSSAIQYSLIQFDNE 309
Query: 234 --------NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK---- 281
VI +K L E FQ + C G + P N R K
Sbjct: 310 INNPTSTFYVIASKLLEE-----FQKSSDRKCKVVGT-------VKPANLIGRRYKSCWH 357
Query: 282 ------LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 335
+ V+ + GTGLVH A AHG D+ +A+++ V + + ++G Y+ G
Sbjct: 358 NELGLPIYEGPHVTDTVGTGLVHTAFAHGFQDYDVAISKGDRVESFVDSRGCYTRHLGHD 417
Query: 336 LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 395
L+G +LG+G+ L L+ D++ + HSYPYDWRTKKPVI+++S+QWFID + I
Sbjct: 418 LDGKEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKKPVIIRSSEQWFIDVDEIGKR 477
Query: 396 A 396
A
Sbjct: 478 A 478
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+ + ++G Y+ G L+G +LGEG+ L L+ D++ + HSYPYDWRTKKPVI+
Sbjct: 402 SFVDSRGCYTRHLGHDLDGKEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKKPVII 461
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESA--KKSLRDQIAQRPYWCISRQRVWGVPIP 1224
++S+QWFID + I A L+ ++ + + SL+ + R WCISRQRVWG PIP
Sbjct: 462 RSSEQWFIDVDEIGKRASMMLDDISVAAGDSDLRASLKQLVTTRKSWCISRQRVWGTPIP 521
Query: 1225 VFYDGDTIIVNEANIKHFCTLI--DEHGPDFWWSLPVEQLLNTSDVNSNV 1272
D + + + + + D WW + V+++L +V ++
Sbjct: 522 ALVDDNGGSYTSRKLIEWVAKLTRERENTDVWWEIDVKEILENEEVRRSL 571
>gi|332981922|ref|YP_004463363.1| isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699600|gb|AEE96541.1| Isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 924
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 330/640 (51%), Gaps = 54/640 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY DH ++S+Y+K + L +G + + +IWTTT W+LPAN + N
Sbjct: 192 TALAEAEIEY-ADHATESLYVKFPVVDDKG-LFDGVDNAYLVIWTTTAWTLPANMAVCLN 249
Query: 478 PALEYSVASVKGANV-IVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQR 535
P +EY + V ++A L++++ D++ F G+ L+ I HP R
Sbjct: 250 PDIEYGLVRFDNGEVYVLAVALIDSVAADAGLGHYDILKRFKGKQLEGIKAKHPFF--DR 307
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
++ +V+ +GTG VH AP HGQ+DF + + VLN + ++G + AG G
Sbjct: 308 FSPVILGEYVTLEQGTGCVHIAPGHGQEDFEVGRKYGLEVLNPVDDKGYMTQKAGK-FAG 366
Query: 596 LNILGDGKDQVLHL-VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ G+ + L +L + QHSYP+ WR K PVI +A++QWF + + +AL
Sbjct: 367 MFYEDAGRAIIEELNANKMLLAVKTVQHSYPHCWRCKNPVIFRATEQWFASIDGFRQQAL 426
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+ V + P ++ + I +R WCISRQR+WGVPIP+FY D I+N+ +
Sbjct: 427 DAVASVKWTPAWGQERMSGMIRERYDWCISRQRLWGVPIPIFYCKDCGEAIINDETVAAV 486
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L + G D W+++ +L V + TK DI+D+WFDSG S + VL+ +
Sbjct: 487 SDLFRQKGSDAWFAMDEADILPEGFVCPHCGGRSFTKEKDIMDVWFDSGSSHAAVLETRD 546
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA++Y+EG DQ GWF SSLLTSVA + AP+ V HG VVD +G KMSKS+GN
Sbjct: 547 DLHWPANMYLEGYDQFRGWFQSSLLTSVATRGRAPYDEVLTHGMVVDGEGRKMSKSLGNG 606
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
+ D+ Q YG D+LR WV + K+ + I
Sbjct: 607 VDPQDVVQ-----------------------------EYGADILRLWVTSADYKN-DMRI 636
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
K+IL + +KIR++ R+L+G L++ + T ++ + +D + L RL + +
Sbjct: 637 SKSILKQLSEVYRKIRNTARFLMGNLYDFNPDTDAMPYDELKEIDRWALMRLHQLIQEVT 696
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y ++Y + F V ++S FY ++KDRLY + + R S L+ I ++
Sbjct: 697 EAYDNYEYHVVHHAIYGFCVVDMSNFYLDVLKDRLYTYRADSKERRSAQTVLYAILDAMV 756
Query: 999 RTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
R +AP++ AEE++ ++P G + H + GS
Sbjct: 757 RMLAPVLSFTAEEIWRYMPHSAGNDTRSVHLASWPVADGS 796
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 227/399 (56%), Gaps = 12/399 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY E + KP FILHDGPPYANG H+GHA+NKILKDI ++ ++G + YVPG
Sbjct: 34 NDLYRKSLEVNDQKPLFILHDGPPYANGDIHLGHALNKILKDIIVKFKSMRGYKAPYVPG 93
Query: 65 WDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE +AI P++ R+ ++FAL+ ++ QK EF+ G+ DW+ N
Sbjct: 94 WDTHGLPIESQAIKKLGVNRYETDPVEFRRMCRDFALKYVDIQKDEFKRLGIRGDWD-NP 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T E+ Q+ F + K+ YIY+ LKPVYW TALAE+E+EY DH ++S+Y+
Sbjct: 153 YLTLKPEFEAKQIEVFGEMAKKGYIYKGLKPVYWCTDCETALAEAEIEY-ADHATESLYV 211
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IVAKC 240
K + L +G + + +IWTTT W+LPAN + NP +EY + V ++A
Sbjct: 212 KFPVVDDKG-LFDGVDNAYLVIWTTTAWTLPANMAVCLNPDIEYGLVRFDNGEVYVLAVA 270
Query: 241 LVESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L++S+ +++ F G+ L+ I HP R ++ +V+ +GTG VH
Sbjct: 271 LIDSVAADAGLGHYDILKRFKGKQLEGIKAKHPFF--DRFSPVILGEYVTLEQGTGCVHI 328
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL-VEPDVL 358
AP HGQ+DF + + VLN + ++G + AG G+ G+ + L +L
Sbjct: 329 APGHGQEDFEVGRKYGLEVLNPVDDKGYMTQKAGK-FAGMFYEDAGRAIIEELNANKMLL 387
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ QHSYP+ WR K PVI +A++QWF + + +AL
Sbjct: 388 AVKTVQHSYPHCWRCKNPVIFRATEQWFASIDGFRQQAL 426
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHL-VEPDVLWTENYQHSYPYDWRTKKPV 1164
LN + ++G + AG G+ G+ + L +L + QHSYP+ WR K PV
Sbjct: 348 LNPVDDKGYMTQKAGK-FAGMFYEDAGRAIIEELNANKMLLAVKTVQHSYPHCWRCKNPV 406
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A++QWF + + +AL + V + P ++ + I +R WCISRQR+WGVPIP
Sbjct: 407 IFRATEQWFASIDGFRQQALDAVASVKWTPAWGQERMSGMIRERYDWCISRQRLWGVPIP 466
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY D I+N+ + L + G D W+++ +L
Sbjct: 467 IFYCKDCGEAIINDETVAAVSDLFRQKGSDAWFAMDEADIL 507
>gi|418993809|ref|ZP_13541446.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG290]
gi|377746968|gb|EHT70938.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG290]
Length = 917
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 321/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
RD ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRDSLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGF +D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFFMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP RD ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRDSLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|293571723|ref|ZP_06682742.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
gi|430840728|ref|ZP_19458651.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1007]
gi|431066289|ref|ZP_19493912.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1604]
gi|431099333|ref|ZP_19496499.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1613]
gi|431594954|ref|ZP_19522060.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1861]
gi|431738280|ref|ZP_19527225.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1972]
gi|291608180|gb|EFF37483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
gi|430494934|gb|ELA71152.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1007]
gi|430568328|gb|ELB07376.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1604]
gi|430570834|gb|ELB09773.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1613]
gi|430590880|gb|ELB28926.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1861]
gi|430597718|gb|ELB35501.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1972]
Length = 932
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 337/643 (52%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWENVTVLKEFAGQEMEYMTASHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 302 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 359
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 360 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 478 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 537
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 538 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 598 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL +
Sbjct: 628 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVI 687
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 688 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 748 AVALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 789
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 238/398 (59%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NQIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+ +F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQREDFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQTEIGWENVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|290890672|ref|ZP_06553742.1| hypothetical protein AWRIB429_1132 [Oenococcus oeni AWRIB429]
gi|419857931|ref|ZP_14380632.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB202]
gi|421184040|ref|ZP_15641467.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB318]
gi|421195619|ref|ZP_15652824.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB568]
gi|421197731|ref|ZP_15654903.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB576]
gi|290479647|gb|EFD88301.1| hypothetical protein AWRIB429_1132 [Oenococcus oeni AWRIB429]
gi|399968274|gb|EJO02726.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB318]
gi|399974783|gb|EJO08866.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB576]
gi|399975449|gb|EJO09501.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB568]
gi|410497083|gb|EKP88561.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB202]
Length = 921
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 328/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S++ ++ L D + ++WTTTP+++ A++ I
Sbjct: 191 SALAEAEVEYH-DLESTSLFYANRVKDGKGVL---DNDTYLVVWTTTPFTITASRGITVG 246
Query: 478 PALEYSVASVKG--ANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +Y + KG + +VAK L+E F + +V+ + G L IT HP +K
Sbjct: 247 PNFDYVLVKPKGQTSKYVVAKALLEENAARFGWKEPEVLATYKGIDLDKITVEHPWDKNI 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L ++ A V+ GTGLVH AP G+DD+ + + +P+ + ++G AG E
Sbjct: 307 TEL-VMNADHVTLDSGTGLVHTAPGFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G D V+ ++ LW TE +HSYP+DWRTKKP+I +A QWF+ E + E
Sbjct: 366 G-KFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKE 424
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L +++V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E I H
Sbjct: 425 ILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEKLIDH 484
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +HG +W+ + ++LL N N TK DI+D+WFDSG SWS V++++
Sbjct: 485 VADLFAKHGSTYWFEHTAKELLPDGYTNEHSPNGKFTKEEDIMDVWFDSGSSWSGVMQER 544
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA VY+EG DQ GWF S+++TSVA+ AP+++V GFV D+KG KMSKS+GN
Sbjct: 545 SYLDYPADVYLEGADQFRGWFNSNIITSVAVNGIAPYKSVIAQGFVFDDKGQKMSKSLGN 604
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTV 880
+IS +D+ G +++R WV + +S+D V
Sbjct: 605 IISPNDVAN-----------------------------QMGTEIVRLWVMSIDSSQD--V 633
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ K+IL + +KIR+++R+LL + S++ +D +M +F
Sbjct: 634 HVSKDILKQVSESYRKIRNTMRFLLANTEDFDPKKNSVAFSDREPIDKWMTADFNQFIKD 693
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
G + + + L+NFV N+LSAFY + KD +Y D + R S + I
Sbjct: 694 WHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTVFYEISVK 753
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L + + P +PH AEE++ +L
Sbjct: 754 LTKLLTPFLPHTAEELWENL 773
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 222/398 (55%), Gaps = 14/398 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY + + K F LHDGPPYANG HIGHA+NKI KDI +R + G YVPGWD
Sbjct: 36 LYEKRLDLNKNKAHFNLHDGPPYANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K +S D R+ A ++AL+ + QK +F+ GVL +W+ N Y T
Sbjct: 96 THGLPIEQQLTKAGYDRKSMSKADWRRLAHDYALKQVEMQKRDFKRLGVLGEWD-NPYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+ E+ Q+ F + + YIYR LKPVYWS SS +ALAE+E+EY D S S++ +
Sbjct: 155 LNPEFEAAQVRVFGAMAGKGYIYRGLKPVYWSWSSESALAEAEVEYH-DLESTSLFYANR 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG--ANVIVAKCLV 242
+ L D + ++WTTTP+++ A++ I P +Y + KG + +VAK L+
Sbjct: 214 VKDGKGVL---DNDTYLVVWTTTPFTITASRGITVGPNFDYVLVKPKGQTSKYVVAKALL 270
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E F + EV+ + G L IT HP +K +L ++ A V+ GTGLVH AP
Sbjct: 271 EENAARFGWKEPEVLATYKGIDLDKITVEHPWDKNITEL-VMNADHVTLDSGTGLVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-- 359
G+DD+ + + +P+ + ++G AG EG D V+ ++ LW
Sbjct: 330 GFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFEG-KFYDDVVPLVIEKLKKAGLWLA 388
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
TE +HSYP+DWRTKKP+I +A QWF+ E + E L
Sbjct: 389 TEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKEIL 426
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 1125 GLNILGEGKDQVLHLVEPDV----LW--TENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
G + G+ D V+ LV + LW TE +HSYP+DWRTKKP+I +A QWF+ E
Sbjct: 361 GSDFEGKFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEP 420
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 1237
+ E L ++ V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E
Sbjct: 421 FRKEILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEK 480
Query: 1238 NIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L +HG +W+ ++LL
Sbjct: 481 LIDHVADLFAKHGSTYWFEHTAKELL 506
>gi|386830730|ref|YP_006237384.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|417797869|ref|ZP_12445055.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
gi|418655149|ref|ZP_13217026.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-105]
gi|334276991|gb|EGL95230.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
gi|375037998|gb|EHS30998.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-105]
gi|385196122|emb|CCG15741.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO
5096 0412]
Length = 917
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV ++ +N Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGNF-NNPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|427392308|ref|ZP_18886313.1| isoleucine-tRNA ligase [Alloiococcus otitis ATCC 51267]
gi|425731575|gb|EKU94391.1| isoleucine-tRNA ligase [Alloiococcus otitis ATCC 51267]
Length = 926
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 229/672 (34%), Positives = 349/672 (51%), Gaps = 75/672 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EYK D SIY+ + L +G +IWTTTPW+LP+N IA +
Sbjct: 191 SALAEAEIEYK-DVRGPSIYVSFDVKDGKGVLDQGD---KIVIWTTTPWTLPSNLAIAVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P EY V V+G N +VA L+ E + W DI++V G+ L++I +HP
Sbjct: 247 PEGEYGVYQVEGQNYVVATKLIDEVSEKVGWE---DIELVRTIKGEDLENIICLHPY--L 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+ ++ V+ GTGLVH AP HG DD+++ +PVL+ I ++G Y D P
Sbjct: 302 DRESLVILGDHVTFDSGTGLVHTAPGHGDDDYIVCQKYDLPVLSPIDDKG-YFTDEVPEF 360
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EGL D + L++ + +L E HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 361 EGL-FYDDANIKSTDLLKENNALLHMEFRTHSYPHDWRTKKPVIFRATPQWFASIDKFRQ 419
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
L +E+V++ + K L + + R W ISRQR WGVP+P+FY D T I+ E ++
Sbjct: 420 AILDEVEKVDWTQDWGMKRLYNMVENRGDWVISRQRAWGVPLPIFYGEDGTAIMTEETLR 479
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H LI E+G + W+ + LL + S N TK DI+D+WFDSG S VLK
Sbjct: 480 HVEALIAEYGSNVWFERDAKDLLPEGFEHPSSPNGQFTKETDIMDVWFDSGSSHQAVLKG 539
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SS+ T VA+ AP++ V GFV+D +G KMSKSVG
Sbjct: 540 RGDLSYPADLYLEGSDQYRGWFNSSITTGVAVNGQAPYKAVLSQGFVLDGEGYKMSKSVG 599
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI +D+ A+D+ G D++R W + + V
Sbjct: 600 NVIDPNDV-------------------ANDM----------GADIIRLW-SISVDTEADV 629
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
+ +ILN + +KIR+++R+L+ + + +D Y+L + +
Sbjct: 630 RVSHDILNQVAEVYRKIRNTVRFLIQNTEDFDPKVNEVDYQDLSGLDQYILVQTDRLVDQ 689
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ T Y E+ Y + + F LS FY + KD LY D + ++R + + I V
Sbjct: 690 VLTAYDEYNYLDIYKTVNQFCTVTLSNFYMNISKDILYIDPEDAQSRRAVQTVFYKILLV 749
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGEARLS 1056
L + +AP++PH AEE++S+L + Y+Q S + KR Y +++ E + S
Sbjct: 750 LAKLLAPVIPHTAEEIWSYLSEPED----------YVQLS-DMPKRQNYQNALELEDKWS 798
Query: 1057 GLHTLHNIFHVL 1068
++ + HVL
Sbjct: 799 QFLSIRD--HVL 808
Score = 279 bits (713), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/401 (41%), Positives = 228/401 (56%), Gaps = 20/401 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+L+ E K FILHDGPPYANG HIGHA+NKI KDI R + G YVPG
Sbjct: 34 DQLFEQMLEKNKDKEPFILHDGPPYANGNIHIGHALNKITKDIINRYKTMAGYYTPYVPG 93
Query: 65 WDCHGLPIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE S K +S + RK +++A + IN Q+ +F+ GVL W+ + Y
Sbjct: 94 WDTHGLPIESALTKSGVDRKSMSVAEFRKLCEDYAWDQINQQRKDFKRLGVLGRWD-DPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T K+Y Q+ F + + YIYR LKPVYWSPSS +ALAE+E+EYK D SIY+
Sbjct: 153 VTLTKDYEAAQIRVFSEMALKGYIYRGLKPVYWSPSSESALAEAEIEYK-DVRGPSIYVS 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L +G +IWTTTPW+LP+N IA +P EY V V+G N +VA L+
Sbjct: 212 FDVKDGKGVLDQGD---KIVIWTTTPWTLPSNLAIAVHPEGEYGVYQVEGQNYVVATKLI 268
Query: 243 ----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E + W DIE+V G+ L++I +HP R+ ++ V+ GTGLVH
Sbjct: 269 DEVSEKVGW---EDIELVRTIKGEDLENIICLHPY--LDRESLVILGDHVTFDSGTGLVH 323
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-- 356
AP HG DD+++ +PVL+ I ++G Y D P EGL D + L++ +
Sbjct: 324 TAPGHGDDDYIVCQKYDLPVLSPIDDKG-YFTDEVPEFEGL-FYDDANIKSTDLLKENNA 381
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 382 LLHMEFRTHSYPHDWRTKKPVIFRATPQWFASIDKFRQAIL 422
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
L+ I ++G Y D P EGL + + L++ + +L E HSYP+DWRTKKP
Sbjct: 344 LSPIDDKG-YFTDEVPEFEGL-FYDDANIKSTDLLKENNALLHMEFRTHSYPHDWRTKKP 401
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A+ QWF ++ + L +E V++ + K L + + R W ISRQR WGVP+
Sbjct: 402 VIFRATPQWFASIDKFRQAILDEVEKVDWTQDWGMKRLYNMVENRGDWVISRQRAWGVPL 461
Query: 1224 PVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY D T I+ E ++H LI E+G + W+ + LL
Sbjct: 462 PIFYGEDGTAIMTEETLRHVEALIAEYGSNVWFERDAKDLL 502
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1022 TFSSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAE 1081
T + FC + + +I+K ILY D + ++R + + I VL + +AP++PH AE
Sbjct: 705 TVNQFCTVTLS-NFYMNISKDILYIDPEDAQSRRAVQTVFYKILLVLAKLLAPVIPHTAE 763
Query: 1082 EVYSHL 1087
E++S+L
Sbjct: 764 EIWSYL 769
>gi|419758701|ref|ZP_14285015.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB304]
gi|399904531|gb|EJN91985.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB304]
Length = 906
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 328/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S++ ++ L D + ++WTTTP+++ A++ I
Sbjct: 176 SALAEAEVEYH-DLESTSLFYANRVKDGKGVL---DNDTYLVVWTTTPFTITASRGITVG 231
Query: 478 PALEYSVASVKG--ANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +Y + KG + +VAK L+E F + +V+ + G L IT HP +K
Sbjct: 232 PNFDYVLVKPKGQTSKYVVAKALLEENAARFGWKEPEVLATYKGIDLDKITVEHPWDKNI 291
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L ++ A V+ GTGLVH AP G+DD+ + + +P+ + ++G AG E
Sbjct: 292 TEL-VMNADHVTLDSGTGLVHTAPGFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFE 350
Query: 595 GLNILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G D V+ ++ LW TE +HSYP+DWRTKKP+I +A QWF+ E + E
Sbjct: 351 G-KFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKE 409
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L +++V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E I H
Sbjct: 410 ILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEKLIDH 469
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +HG +W+ + ++LL N N TK DI+D+WFDSG SWS V++++
Sbjct: 470 VADLFAKHGSTYWFEHTAKELLPDGYTNEHSPNGKFTKEEDIMDVWFDSGSSWSGVMQER 529
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA VY+EG DQ GWF S+++TSVA+ AP+++V GFV D+KG KMSKS+GN
Sbjct: 530 SYLDYPADVYLEGADQFRGWFNSNIITSVAVNGIAPYKSVIAQGFVFDDKGQKMSKSLGN 589
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTV 880
+IS +D+ G +++R WV + +S+D V
Sbjct: 590 IISPNDVAN-----------------------------QMGTEIVRLWVMSIDSSQD--V 618
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ K+IL + +KIR+++R+LL + S++ +D +M +F
Sbjct: 619 HVSKDILKQVSESYRKIRNTMRFLLANTEDFDPKKNSVAFSDREPIDKWMTADFNQFIKD 678
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
G + + + L+NFV N+LSAFY + KD +Y D + R S + I
Sbjct: 679 WHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTVFYEISVK 738
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L + + P +PH AEE++ +L
Sbjct: 739 LTKLLTPFLPHTAEELWENL 758
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 222/398 (55%), Gaps = 14/398 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY + + K F LHDGPPYANG HIGHA+NKI KDI +R + G YVPGWD
Sbjct: 21 LYEKRLDLNKNKAHFNLHDGPPYANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWD 80
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K +S D R+ A ++AL+ + QK +F+ GVL +W+ N Y T
Sbjct: 81 THGLPIEQQLTKAGYDRKSMSKADWRRLAHDYALKQVEMQKRDFKRLGVLGEWD-NPYLT 139
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+ E+ Q+ F + + YIYR LKPVYWS SS +ALAE+E+EY D S S++ +
Sbjct: 140 LNPEFEAAQVRVFGAMAGKGYIYRGLKPVYWSWSSESALAEAEVEYH-DLESTSLFYANR 198
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG--ANVIVAKCLV 242
+ L D + ++WTTTP+++ A++ I P +Y + KG + +VAK L+
Sbjct: 199 VKDGKGVL---DNDTYLVVWTTTPFTITASRGITVGPNFDYVLVKPKGQTSKYVVAKALL 255
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E F + EV+ + G L IT HP +K +L ++ A V+ GTGLVH AP
Sbjct: 256 EENAARFGWKEPEVLATYKGIDLDKITVEHPWDKNITEL-VMNADHVTLDSGTGLVHTAP 314
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-- 359
G+DD+ + + +P+ + ++G AG EG D V+ ++ LW
Sbjct: 315 GFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFEG-KFYDDVVPLVIEKLKKAGLWLA 373
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
TE +HSYP+DWRTKKP+I +A QWF+ E + E L
Sbjct: 374 TEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKEIL 411
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 1125 GLNILGEGKDQVLHLVEPDV----LW--TENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
G + G+ D V+ LV + LW TE +HSYP+DWRTKKP+I +A QWF+ E
Sbjct: 346 GSDFEGKFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEP 405
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 1237
+ E L ++ V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E
Sbjct: 406 FRKEILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEK 465
Query: 1238 NIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L +HG +W+ ++LL
Sbjct: 466 LIDHVADLFAKHGSTYWFEHTAKELL 491
>gi|258423763|ref|ZP_05686649.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
gi|418888983|ref|ZP_13443119.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1524]
gi|257845995|gb|EEV70023.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
gi|377754493|gb|EHT78402.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1524]
Length = 917
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 321/621 (51%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDDKGVV---DSDAKFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L+Y +V G IVA+ L E L W + I + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGQKYIVAEALSDAVAEALGWD-KDSIKLEKEFSGKELEYVVAQHPF--L 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 304 DRKSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-F 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 363 EGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRKD 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +E NF K + + + R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 423 ILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 482 HVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLET 541
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y+EG DQ GWF SS+ T+VA + +P++ + HGFV+D +G KMSKS+G
Sbjct: 542 RPELSFPADMYLEGSDQYRGWFNSSITTAVATRGVSPYKFLLSHGFVMDGEGKKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI + + G D+ R WV++ V
Sbjct: 602 NVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF +
Sbjct: 632 RISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTKS 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 692 TINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVD 751
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 752 MTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 225/393 (57%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDDK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GVV---DSDAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGQKYIVAEALSDAVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIKLEKEFSGKELEYVVAQHPF--LDRKSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 333 DDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASISKVRKDIL 424
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRKDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFAEHGSNIWFEREAKDLL 504
>gi|297591363|ref|ZP_06950001.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|384867925|ref|YP_005748121.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
gi|297576249|gb|EFH94965.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|312438430|gb|ADQ77501.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
Length = 920
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 194 SSLAEAEIEYH-DKRSASIYVAFNVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 247
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 248 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 305
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 306 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 364
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 365 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 423
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 424 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 483
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 484 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 543
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 544 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 603
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 604 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 633
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 634 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 693
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 694 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 753
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 754 DMTKLLAPILVHTAEEVWSHTP 775
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 45 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 104
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 105 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 162
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 163 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFNVKDD- 220
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 221 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 276
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 277 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 333
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 334 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 392
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 393 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 427
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 352 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 410
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 411 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 470
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 471 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 507
>gi|49483356|ref|YP_040580.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257427907|ref|ZP_05604305.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430540|ref|ZP_05606922.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433301|ref|ZP_05609659.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
gi|257436143|ref|ZP_05612190.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
gi|282903745|ref|ZP_06311633.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|282905509|ref|ZP_06313364.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282910766|ref|ZP_06318569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282913969|ref|ZP_06321756.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282918891|ref|ZP_06326626.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
gi|282924014|ref|ZP_06331690.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
gi|283957935|ref|ZP_06375386.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293501002|ref|ZP_06666853.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509960|ref|ZP_06668669.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
gi|293526549|ref|ZP_06671234.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|295427679|ref|ZP_06820311.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|415683781|ref|ZP_11448983.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
gi|417888864|ref|ZP_12532966.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
gi|418565192|ref|ZP_13129606.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
gi|418582027|ref|ZP_13146105.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1605]
gi|418595545|ref|ZP_13159152.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
gi|418601278|ref|ZP_13164716.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
gi|418891825|ref|ZP_13445940.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1176]
gi|418897730|ref|ZP_13451800.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418908904|ref|ZP_13462907.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG149]
gi|418922775|ref|ZP_13476692.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1233]
gi|418985773|ref|ZP_13533459.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1500]
gi|1174521|sp|P41972.1|SYI1_STAAU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|81651290|sp|Q6GHP2.1|SYI_STAAR RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|437916|emb|CAA52296.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
gi|49241485|emb|CAG40171.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257274748|gb|EEV06235.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278668|gb|EEV09287.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281394|gb|EEV11531.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
gi|257284425|gb|EEV14545.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
gi|282313986|gb|EFB44378.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
gi|282316701|gb|EFB47075.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
gi|282322037|gb|EFB52361.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282325371|gb|EFB55680.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282330801|gb|EFB60315.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595363|gb|EFC00327.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|283790084|gb|EFC28901.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920621|gb|EFD97684.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|291096007|gb|EFE26268.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467410|gb|EFF09927.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
gi|295128037|gb|EFG57671.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|315194079|gb|EFU24472.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
gi|341853984|gb|EGS94860.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
gi|371974673|gb|EHO91992.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
gi|374399105|gb|EHQ70253.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
gi|374401125|gb|EHQ72212.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
gi|377705591|gb|EHT29895.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1500]
gi|377710437|gb|EHT34675.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1605]
gi|377731157|gb|EHT55214.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1176]
gi|377736098|gb|EHT60128.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1233]
gi|377753942|gb|EHT77852.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG149]
gi|377760765|gb|EHT84641.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 917
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFNVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFNVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|416839234|ref|ZP_11902628.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O11]
gi|416847398|ref|ZP_11907120.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O46]
gi|323440965|gb|EGA98672.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O11]
gi|323442282|gb|EGA99912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O46]
Length = 917
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGDKYIIAEALSDAVAEALDWD-KASIKLENEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILEAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 270 bits (689), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 228/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + ++ IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMAEKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGDKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLENEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILEAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|402574190|ref|YP_006623533.1| isoleucyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
gi|402255387|gb|AFQ45662.1| Isoleucyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
Length = 928
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 329/620 (53%), Gaps = 54/620 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY D + +IY+K + + L E T +IWTTTPW+LPANQ I+ +
Sbjct: 192 TALAEAEIEYA-DKPATAIYVKFAVRDGLSVLTEDNT--FVVIWTTTPWTLPANQAISVH 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDL 537
P +Y+V + +VA+ ++E+L+ ++ ++ VV G+ L+ + +P+ RD
Sbjct: 249 PEFKYAVVKANQEHWVVAEGMLESLRSLWKLELPVVKILSGKELEGVICKNPLM--NRDS 306
Query: 538 KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLN 597
++ V+ GTG VH APAHG+DDF ++ + VL + +QGK++ + G GL
Sbjct: 307 LVICGEHVTLEAGTGCVHTAPAHGEDDFYVSKKYDLTVLCPVDHQGKFTSEGG-AYAGLK 365
Query: 598 ILGDGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
G ++ ++ D++ E +HSYP+ WR K P+I +A++QWF + AL
Sbjct: 366 T-GKANPVIVEDLKNSGDLVLEEIIEHSYPHCWRCKSPIIFRATEQWFASINGFRQAALD 424
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFC 713
+E+V ++P K + + IA R WCISRQR WGVPIP+FY D ++VN+ I
Sbjct: 425 EIEKVRWIPAWGKDRIFNMIADRGDWCISRQRTWGVPIPIFYCQDCGKVLVNDQTIARVQ 484
Query: 714 TLIDEHGPDFWWSLSVEQLLNTSDV----NSNVTKSNDILDIWFDSGISWSHVLKDKP-- 767
+ G D W++ S +LL +N +K DI+D+WFDSG S + VLK +P
Sbjct: 485 EFFRQEGSDAWFAHSALELLPAGTACECGGTNFSKETDIMDVWFDSGTSHAGVLKQRPEL 544
Query: 768 ---AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
A +Y+EG DQ GWF SSL TSVA AP+RNV HGFVVDE+G KMSKS+GN +
Sbjct: 545 SWPADLYLEGSDQHRGWFNSSLSTSVAAFGQAPYRNVLTHGFVVDEQGRKMSKSLGNGVD 604
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+ Q G D+LR WV++ K+ V
Sbjct: 605 PLKVVQ-----------------------------ELGADILRLWVSSVDYKN-DVAASP 634
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTL 940
I+ + +KIR++LR+LL L++ + ++ + +D + L +L + +
Sbjct: 635 RIMKQMSEAYRKIRNTLRFLLSNLNDFDPAKDKVAYKDLQEIDRWALLKLSKVVERVLLG 694
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y +++ + NF ELSA Y +VKDRLY + R S L+ + L+R
Sbjct: 695 YESYEFHWTYHTIHNFCTIELSAVYLDIVKDRLYVEGKTSLLRRSAQTVLYEVLDALVRL 754
Query: 1001 VAPIMPHLAEEVYSHLPSRQ 1020
+ PI+ + EE++ ++P +
Sbjct: 755 LTPILSFMTEEIWPYIPGEK 774
Score = 283 bits (724), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/396 (39%), Positives = 235/396 (59%), Gaps = 13/396 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY ++A G P+FILHDGPPYANG H+GHA+NK+LKDI ++ + G YVPGWD
Sbjct: 36 LYEKVQKAREGCPKFILHDGPPYANGDIHLGHAINKVLKDIIVKYKTMMGFDAPYVPGWD 95
Query: 67 CHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +K + +S L+ R+K K++A + + Q+ EF GV DWE N Y
Sbjct: 96 THGLPIEQQVIKKLGVNRHSVSALEFREKCKDYAEKYVGIQREEFRRLGVRGDWE-NPYL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T KEY Q+ F ++ K+ YIY+ LKPVYW PS TALAE+E+EY D + +IY+K
Sbjct: 155 TLQKEYEAAQIGVFGDMTKKGYIYKGLKPVYWCPSCETALAEAEIEYA-DKPATAIYVKF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+ + L E T +IWTTTPW+LPANQ I+ +P +Y+V + +VA+ ++E
Sbjct: 214 AVRDGLSVLTEDNT--FVVIWTTTPWTLPANQAISVHPEFKYAVVKANQEHWVVAEGMLE 271
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
SL+ ++ ++ VV G+ L+ + +P+ RD ++ V+ GTG VH APAH
Sbjct: 272 SLRSLWKLELPVVKILSGKELEGVICKNPLM--NRDSLVICGEHVTLEAGTGCVHTAPAH 329
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE--PDVLWTE 361
G+DDF ++ + VL + +QGK++ + G GL G ++ ++ D++ E
Sbjct: 330 GEDDFYVSKKYDLTVLCPVDHQGKFTSEGG-AYAGLKT-GKANPVIVEDLKNSGDLVLEE 387
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+HSYP+ WR K P+I +A++QWF + AL
Sbjct: 388 IIEHSYPHCWRCKSPIIFRATEQWFASINGFRQAAL 423
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVE--PDVLWTENYQHSYPYDWRTKKPVIL 1166
+ +QGK++ + G GL G+ ++ ++ D++ E +HSYP+ WR K P+I
Sbjct: 348 VDHQGKFTSEGG-AYAGLKT-GKANPVIVEDLKNSGDLVLEEIIEHSYPHCWRCKSPIIF 405
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + AL +E V ++P K + + IA R WCISRQR WGVPIP+F
Sbjct: 406 RATEQWFASINGFRQAALDEIEKVRWIPAWGKDRIFNMIADRGDWCISRQRTWGVPIPIF 465
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D ++VN+ I + G D W++ +LL
Sbjct: 466 YCQDCGKVLVNDQTIARVQEFFRQEGSDAWFAHSALELL 504
>gi|393247218|gb|EJD54726.1| isoleucyl-tRNA synthetase [Auricularia delicata TFB-10046 SS5]
Length = 959
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 212/645 (32%), Positives = 325/645 (50%), Gaps = 66/645 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQ----------VPAHLLEGATDLHALIWTTTPWS 467
TALAE+ELEY +H S ++++ L++ V AH L L+WTTTPW+
Sbjct: 192 TALAEAELEYNDNHKSTAVFVTFDLDESSFTPQLRALVQAHGLP-----RLLVWTTTPWT 246
Query: 468 LPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYI 527
LP+N IA + L YS+ ++ A L+E+ D +V+ G L Y
Sbjct: 247 LPSNMAIAVHNELNYSL--LRRAETQELLLLLESAAAPIIGDFEVLTTISGGDLIGARY- 303
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI------PVLNLITN 581
P+ + L+ + V + KGTGLVH A H +D+L+ A + VL+ +
Sbjct: 304 KPLFSSRPSQPLIHSPHVKADKGTGLVHSAAGHAHEDYLVMQALGLLGARGENVLSPVGP 363
Query: 582 QGKYSPDAGP------GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 633
G ++ + GL G +LG G ++ ++ ++ E + HSYPYDWRTK+P
Sbjct: 364 DGHFTSEVAELWPEVDGLSGQFVLGKGTAVIVQALQERGHLVKQEKFVHSYPYDWRTKQP 423
Query: 634 VILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPI 693
I+ A+ QWF + + +K A A L V F+P ++ LR I +R WCISRQR WGVPI
Sbjct: 424 TIVTATSQWFANIDDLKSAAFAALNNVQFIPAGSETRLRSFIRERSEWCISRQRTWGVPI 483
Query: 694 PVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVN-SNVTKSNDILDI 751
P +D D ++ ++ + +++D+HG +WW + + S TKS D +D+
Sbjct: 484 PALFDSDGNAVLTPESLDYIISVLDKHGTSYWWDAPASEFVPPSLAGKGEFTKSRDTMDV 543
Query: 752 WFDSGISWSHVLKDKPAHVYMEGMDQINGWFMSSLLTSVALKHT---APFRNVFLHGFVV 808
WFDSG +W+ + PA V +EG DQ GWF S LLTS+ AP++ V HGF +
Sbjct: 544 WFDSGTAWTAL--SAPADVVLEGSDQHRGWFQSLLLTSLGAGEAGLGAPYKTVVTHGFTL 601
Query: 809 DEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRW 868
D+KG KM+KS+GNV+S I G KK P YG DVLR
Sbjct: 602 DDKGRKMAKSLGNVVSPLTIVNGGPD--------------------QKKEPPYGADVLRL 641
Query: 869 WVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVD 923
WVA+ +D + IG ++L ++ + +K+R+ R++L L + +E ++R +
Sbjct: 642 WVASVDFGRD--MSIGASVLANTAEAHRKLRNCSRFMLANLSDGAEQFEPVTRSEMGLAE 699
Query: 924 VYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEAR 983
YM+ + E Q Y + + L+NF LSAFYF + KD LY D + R
Sbjct: 700 RYMMHEMYELQREAHAAYATLNFPKVVTSLVNFCNVTLSAFYFNITKDSLYADVADAPRR 759
Query: 984 LSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
+ L ++ + +AP++PHLAEE+++ S S F
Sbjct: 760 RAALTVFDHVLRTMTMIMAPLLPHLAEEIHATWKSSDPKLSVFAR 804
Score = 272 bits (696), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 233/422 (55%), Gaps = 37/422 (8%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
ELY WQ+E + G+ F+L DGPPYANG+ H+GHA+NKILKDI LR LL GKRV Y+PGW
Sbjct: 34 ELYKWQQENVKGEA-FVLQDGPPYANGSLHMGHALNKILKDIILRFQLLNGKRVQYIPGW 92
Query: 66 DCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADW-EHNC 121
DCHGLPIE KA+ +K L P IR A+ AL ++ Q+ + + +G+L +W +
Sbjct: 93 DCHGLPIENKALAELGAKAHELEPHVIRDAARKVALREVDNQREQMKVFGLLGNWSDGTT 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T + Y QL F + K+ I R +PV+WSPSSRTALAE+ELEY +H S ++++
Sbjct: 153 YRTIEHAYEIRQLRTFQAMVKKGLITRHYRPVHWSPSSRTALAEAELEYNDNHKSTAVFV 212
Query: 182 KIKLNQ----------VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK 231
L++ V AH L L+WTTTPW+LP+N IA + L YS+ ++
Sbjct: 213 TFDLDESSFTPQLRALVQAHGLP-----RLLVWTTTPWTLPSNMAIAVHNELNYSL--LR 265
Query: 232 GANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSS 291
A L+ES D EV+ G L Y P+ + L+ + V +
Sbjct: 266 RAETQELLLLLESAAAPIIGDFEVLTTISGGDLIGARY-KPLFSSRPSQPLIHSPHVKAD 324
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKI------PVLNLITNQGKYSPDAGP------GLEGL 339
KGTGLVH A H +D+L+ A + VL+ + G ++ + GL G
Sbjct: 325 KGTGLVHSAAGHAHEDYLVMQALGLLGARGENVLSPVGPDGHFTSEVAELWPEVDGLSGQ 384
Query: 340 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+LG G ++ ++ ++ E + HSYPYDWRTK+P I+ A+ QWF + + +K A
Sbjct: 385 FVLGKGTAVIVQALQERGHLVKQEKFVHSYPYDWRTKQPTIVTATSQWFANIDDLKSAAF 444
Query: 398 VC 399
Sbjct: 445 AA 446
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 88/148 (59%), Gaps = 3/148 (2%)
Query: 1122 GLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 1179
GL G +LG+G ++ ++ ++ E + HSYPYDWRTK+P I+ A+ QWF + + +
Sbjct: 380 GLSGQFVLGKGTAVIVQALQERGHLVKQEKFVHSYPYDWRTKQPTIVTATSQWFANIDDL 439
Query: 1180 KPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEAN 1238
K A A L V F+P ++ LR I +R WCISRQR WGVPIP +D D ++ +
Sbjct: 440 KSAAFAALNNVQFIPAGSETRLRSFIRERSEWCISRQRTWGVPIPALFDSDGNAVLTPES 499
Query: 1239 IKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
+ + +++D+HG +WW P + + S
Sbjct: 500 LDYIISVLDKHGTSYWWDAPASEFVPPS 527
>gi|418598300|ref|ZP_13161810.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
gi|374399657|gb|EHQ70793.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
Length = 917
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|384864420|ref|YP_005749779.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|312829587|emb|CBX34429.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
2]
Length = 917
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|293377353|ref|ZP_06623557.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
gi|431031530|ref|ZP_19490704.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1590]
gi|292644045|gb|EFF62151.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
gi|430564940|gb|ELB04115.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1590]
Length = 932
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 337/643 (52%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWEKVTVLKEFAGQEMEYMTASHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 302 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 359
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 360 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 478 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 537
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 538 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 598 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL +
Sbjct: 628 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVI 687
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 688 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 748 AVALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 789
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 236/397 (59%), Gaps = 23/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQKLNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K +S + KK + +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 99 LPIEQVLANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEH-PYVTLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++ +
Sbjct: 158 SYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVAFNVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+E
Sbjct: 217 GKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLLE---- 269
Query: 248 TFQTDI-----EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
T QT+I V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP
Sbjct: 270 TVQTEIGWEKVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWT 360
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 328 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKL 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 386 DFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|15924183|ref|NP_371717.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926776|ref|NP_374309.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
gi|57651763|ref|YP_186069.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|87161418|ref|YP_493784.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194899|ref|YP_499699.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148267685|ref|YP_001246628.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150393743|ref|YP_001316418.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|151221315|ref|YP_001332137.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979514|ref|YP_001441773.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|161509367|ref|YP_001575026.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253314953|ref|ZP_04838166.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253731812|ref|ZP_04865977.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|255005980|ref|ZP_05144581.2| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257795751|ref|ZP_05644730.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|258415975|ref|ZP_05682245.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|258419722|ref|ZP_05682689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|258438764|ref|ZP_05689917.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|258444530|ref|ZP_05692859.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
gi|258447637|ref|ZP_05695781.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|258449479|ref|ZP_05697582.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|258451891|ref|ZP_05699912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|258454858|ref|ZP_05702822.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|262048766|ref|ZP_06021648.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
gi|262051692|ref|ZP_06023911.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
gi|269202808|ref|YP_003282077.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
gi|282892679|ref|ZP_06300914.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
gi|282919974|ref|ZP_06327703.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
gi|282929238|ref|ZP_06336813.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
gi|284024117|ref|ZP_06378515.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
gi|295407131|ref|ZP_06816932.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|296276131|ref|ZP_06858638.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
gi|297245983|ref|ZP_06929842.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|379014384|ref|YP_005290620.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VC40]
gi|384869726|ref|YP_005752440.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
gi|387150336|ref|YP_005741900.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
gi|415688519|ref|ZP_11452209.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
gi|415691040|ref|ZP_11453279.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
gi|417650020|ref|ZP_12299800.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
gi|417651355|ref|ZP_12301118.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
gi|417800988|ref|ZP_12448090.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
gi|417893442|ref|ZP_12537471.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
gi|417898891|ref|ZP_12542804.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
gi|417901503|ref|ZP_12545379.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
gi|418286458|ref|ZP_12899104.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
gi|418312757|ref|ZP_12924266.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
gi|418316131|ref|ZP_12927575.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
gi|418318217|ref|ZP_12929627.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
gi|418427328|ref|ZP_13000340.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS2]
gi|418430169|ref|ZP_13003085.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433130|ref|ZP_13005910.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS4]
gi|418436805|ref|ZP_13008607.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS5]
gi|418439676|ref|ZP_13011384.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS6]
gi|418442729|ref|ZP_13014331.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS7]
gi|418445788|ref|ZP_13017264.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS8]
gi|418448732|ref|ZP_13020124.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS9]
gi|418451556|ref|ZP_13022890.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS10]
gi|418561885|ref|ZP_13126360.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
gi|418569089|ref|ZP_13133429.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
gi|418570829|ref|ZP_13135090.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
gi|418579023|ref|ZP_13143118.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1114]
gi|418638184|ref|ZP_13200487.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
gi|418642777|ref|ZP_13204963.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
gi|418643746|ref|ZP_13205904.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
gi|418647714|ref|ZP_13209777.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
gi|418649435|ref|ZP_13211463.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-91]
gi|418654625|ref|ZP_13216521.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
gi|418657805|ref|ZP_13219560.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-111]
gi|418873480|ref|ZP_13427775.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-125]
gi|418878043|ref|ZP_13432278.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880870|ref|ZP_13435089.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883799|ref|ZP_13437994.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1769]
gi|418886453|ref|ZP_13440601.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1150]
gi|418894812|ref|ZP_13448909.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1057]
gi|418903401|ref|ZP_13457442.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1770]
gi|418906127|ref|ZP_13460154.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418911798|ref|ZP_13465781.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG547]
gi|418914290|ref|ZP_13468262.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418920271|ref|ZP_13474204.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC348]
gi|418925425|ref|ZP_13479327.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG2018]
gi|418928449|ref|ZP_13482335.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1612]
gi|418931259|ref|ZP_13485101.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1750]
gi|418946962|ref|ZP_13499361.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-157]
gi|418991055|ref|ZP_13538716.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1096]
gi|419775373|ref|ZP_14301315.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
gi|419785561|ref|ZP_14311313.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
gi|421150076|ref|ZP_15609732.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|422743417|ref|ZP_16797401.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MRSA177]
gi|424785022|ref|ZP_18211825.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus CN79]
gi|440708391|ref|ZP_20889057.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
gi|440734638|ref|ZP_20914250.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443637313|ref|ZP_21121395.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
gi|443640116|ref|ZP_21124113.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
gi|54039673|sp|P67509.1|SYI_STAAN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|54042036|sp|P67508.1|SYI_STAAM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|81859601|sp|Q5HGN8.1|SYI_STAAC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|123407059|sp|Q2FZ82.1|SYI_STAA8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|123749624|sp|Q2FHP4.1|SYI_STAA3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|166229773|sp|A7X1D8.1|SYI_STAA1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|172048846|sp|A6QG93.1|SYI_STAAE RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|189082335|sp|A6U113.1|SYI_STAA2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|189082336|sp|A5IS79.1|SYI_STAA9 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|189082337|sp|A8Z3N1.1|SYI_STAAT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|13700992|dbj|BAB42288.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
gi|14246963|dbj|BAB57355.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
gi|57285949|gb|AAW38043.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|87127392|gb|ABD21906.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202457|gb|ABD30267.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147740754|gb|ABQ49052.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|149946195|gb|ABR52131.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|150374115|dbj|BAF67375.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721649|dbj|BAF78066.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|160368176|gb|ABX29147.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724462|gb|EES93191.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257789723|gb|EEV28063.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|257839311|gb|EEV63785.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|257844307|gb|EEV68689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|257848023|gb|EEV72016.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|257850023|gb|EEV73976.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
gi|257853828|gb|EEV76787.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|257857467|gb|EEV80365.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|257860499|gb|EEV83326.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|257863241|gb|EEV86005.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|259160427|gb|EEW45452.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
gi|259163222|gb|EEW47782.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
gi|262075098|gb|ACY11071.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
gi|282589197|gb|EFB94294.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
gi|282594690|gb|EFB99674.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
gi|282764676|gb|EFC04801.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
gi|285816875|gb|ADC37362.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
gi|294967984|gb|EFG44012.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|297177147|gb|EFH36401.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|315130984|gb|EFT86968.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
gi|315196923|gb|EFU27266.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
gi|320143048|gb|EFW34838.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MRSA177]
gi|329313861|gb|AEB88274.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
gi|329725029|gb|EGG61525.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
gi|329727539|gb|EGG63995.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
gi|334277482|gb|EGL95712.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
gi|341845342|gb|EGS86544.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
gi|341847174|gb|EGS88359.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
gi|341854827|gb|EGS95689.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
gi|365167166|gb|EHM58642.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
gi|365238402|gb|EHM79239.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
gi|365241802|gb|EHM82537.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
gi|365243665|gb|EHM84336.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
gi|371975161|gb|EHO92461.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
gi|371978274|gb|EHO95524.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
gi|371983009|gb|EHP00157.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
gi|374363081|gb|AEZ37186.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VC40]
gi|375014450|gb|EHS08131.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
gi|375015890|gb|EHS09534.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
gi|375023408|gb|EHS16871.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
gi|375028044|gb|EHS21400.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
gi|375029424|gb|EHS22752.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
gi|375029808|gb|EHS23133.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-91]
gi|375039969|gb|EHS32879.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-111]
gi|375366017|gb|EHS70029.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-125]
gi|375377159|gb|EHS80649.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-157]
gi|377694165|gb|EHT18530.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1165]
gi|377695676|gb|EHT20036.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1057]
gi|377697050|gb|EHT21405.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1114]
gi|377714886|gb|EHT39084.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1769]
gi|377715092|gb|EHT39289.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1750]
gi|377723177|gb|EHT47302.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1096]
gi|377725176|gb|EHT49291.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG547]
gi|377725406|gb|EHT49519.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731763|gb|EHT55816.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1213]
gi|377738361|gb|EHT62370.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1612]
gi|377742416|gb|EHT66401.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1770]
gi|377744494|gb|EHT68471.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG2018]
gi|377757792|gb|EHT81680.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377765427|gb|EHT89277.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377765630|gb|EHT89479.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC348]
gi|383362531|gb|EID39882.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
gi|383971057|gb|EID87147.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
gi|387718564|gb|EIK06522.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS3a]
gi|387718915|gb|EIK06871.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS2]
gi|387725796|gb|EIK13394.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS4]
gi|387727909|gb|EIK15409.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS5]
gi|387730779|gb|EIK18137.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS6]
gi|387735716|gb|EIK22826.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS8]
gi|387737394|gb|EIK24460.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS7]
gi|387737948|gb|EIK25002.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS9]
gi|387744437|gb|EIK31201.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS10]
gi|394329466|gb|EJE55568.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|408423397|emb|CCJ10808.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408425387|emb|CCJ12774.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408427375|emb|CCJ14738.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408429362|emb|CCJ26527.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408431350|emb|CCJ18665.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408433344|emb|CCJ20629.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408435335|emb|CCJ22595.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|408437320|emb|CCJ24563.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
gi|421956432|gb|EKU08761.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus CN79]
gi|436431666|gb|ELP29019.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436504974|gb|ELP40935.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
gi|443405863|gb|ELS64454.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
gi|443405894|gb|ELS64484.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
Length = 917
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|257897130|ref|ZP_05676783.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
gi|257833695|gb|EEV60116.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
Length = 930
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 213/642 (33%), Positives = 335/642 (52%), Gaps = 66/642 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 189 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 244
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 245 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWEKVTVLKEFAGQEMEYMTASHPFY- 299
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 300 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 357
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 358 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 416
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
L +E+V++V K L + I R W ISRQR WGVP+P+FY + I+ A I
Sbjct: 417 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPATI 476
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL+
Sbjct: 477 EHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLR 536
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+
Sbjct: 537 QRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSL 596
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN+I+ + + +G D+LR WV++ +
Sbjct: 597 GNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEAD 626
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQ 934
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 627 VRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIK 686
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 687 EIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTA 746
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 747 VALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 787
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 236/397 (59%), Gaps = 23/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 37 KRQKLNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHG 96
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K +S + KK + +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 97 LPIEQVLANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEH-PYVTLDP 155
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++ +
Sbjct: 156 SYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVAFNVKD 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+E
Sbjct: 215 GKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLLE---- 267
Query: 248 TFQTDI-----EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
T QT+I V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP
Sbjct: 268 TVQTEIGWEKVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAPG 325
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWT 360
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 326 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKL 383
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 384 DFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 420
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 345 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 402
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 403 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 462
Query: 1227 Y-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y + I+ A I+H L EHG W+ ++LL
Sbjct: 463 YAENGEAIITPATIEHVAKLFAEHGSIIWFEKEAKELL 500
>gi|227550467|ref|ZP_03980516.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
gi|227180368|gb|EEI61340.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
Length = 932
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 213/642 (33%), Positives = 335/642 (52%), Gaps = 66/642 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWEKVTVLKEFAGQEMEYMTASHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 302 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 359
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 360 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
L +E+V++V K L + I R W ISRQR WGVP+P+FY + I+ A I
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPATI 478
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL+
Sbjct: 479 EHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLR 538
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+
Sbjct: 539 QRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSL 598
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN+I+ + + +G D+LR WV++ +
Sbjct: 599 GNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEAD 628
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQ 934
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 629 VRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIK 688
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 689 EIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTA 748
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 749 VALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 789
Score = 292 bits (748), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 236/397 (59%), Gaps = 23/397 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQKLNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K +S + KK + +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 99 LPIEQVLANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEH-PYVTLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++ +
Sbjct: 158 SYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVAFNVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+E
Sbjct: 217 GKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLLE---- 269
Query: 248 TFQTDI-----EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
T QT+I V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP
Sbjct: 270 TVQTEIGWEKVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAPG 327
Query: 303 HGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWT 360
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 328 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKL 385
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 386 DFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y + I+ A I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPATIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|253733568|ref|ZP_04867733.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|304381246|ref|ZP_07363899.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|422745577|ref|ZP_16799516.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MRSA131]
gi|253728438|gb|EES97167.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|304340229|gb|EFM06170.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|320140992|gb|EFW32839.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MRSA131]
Length = 920
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 194 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 247
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 248 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 305
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 306 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 364
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 365 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 423
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 424 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 483
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 484 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 543
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 544 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 603
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 604 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 633
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 634 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 693
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 694 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 753
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 754 DMTKLLAPILVHTAEEVWSHTP 775
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 45 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 104
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 105 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 162
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 163 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 220
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 221 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 276
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 277 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 333
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 334 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 392
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 393 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 427
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 352 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 410
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 411 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 470
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 471 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 507
>gi|330813622|ref|YP_004357861.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486717|gb|AEA81122.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
Length = 917
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 213/633 (33%), Positives = 323/633 (51%), Gaps = 57/633 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
TALA++E+EY DH S +I+ K + E ++ +IWTTTPW++P N+ +AF
Sbjct: 193 ATALADAEVEY-ADHKSNTIFTKFPIQGT----FESLDNVKVVIWTTTPWTIPCNRALAF 247
Query: 477 NPALEYSVASV-----KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+ EYS+ V K V+ K + E + D ++ F G L+++ HP
Sbjct: 248 SSNYEYSLVEVTQHGEKDTVVLATKLISEVMNSCEIEDFKIIKSFLGSNLKNVKCSHPFQ 307
Query: 532 --KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
D+ LL A FV+ +GTG+VH AP+HG DDF L L I N I + G Y+ +
Sbjct: 308 LYGYDFDVPLLEADFVTLEQGTGIVHIAPSHGPDDFNLGLKNNIKAENTINDHGHYT-NV 366
Query: 590 GPGLEGLNILGDGKDQVLHL-VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG++I K + L + +L + HSYP+ WR+K P++ +A+ QWFI E
Sbjct: 367 IKKFEGIHIFKADKIIIEELNLNKKLLGSGTLVHSYPHSWRSKAPLVHRATPQWFISMES 426
Query: 649 --IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIV 704
++ AL ++ F P + LR I RP WCISRQR WGVPIP+F + T ++
Sbjct: 427 NDLRNVALKAIDNTKFYPPVGQNRLRSMIETRPDWCISRQRFWGVPIPIFVNKKTHEPLI 486
Query: 705 NEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+E K + + G D W+ E+ L + K NDI+++WFDSG S S+VL+
Sbjct: 487 DEDVFKRIENIFLKEGSDAWFVKKDEEFLGPKYKREDYKKVNDIVEVWFDSGSSHSYVLE 546
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF SSLL S + AP++++ HGFVVD KG KMSKS+
Sbjct: 547 KRKDLKWPADMYLEGSDQHRGWFHSSLLQSCGTRGQAPYKSILCHGFVVDGKGQKMSKSL 606
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNV+S ++ + YG D+LR WV A D
Sbjct: 607 GNVVSPDEV-----------------------------IKKYGADILRLWVIASDYSD-D 636
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHN--HSESTGSISR--YVDVYMLKRLCEFQN 935
+ I IL +KIR++ R+LLG L++ + E T +S ++ Y+L ++ +
Sbjct: 637 LKIDNAILEQHSQSYRKIRNTFRFLLGNLNDQLNLEETVKLSECEEIEKYILHKISSLDS 696
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
L + + + +LNF +LSA YF + KD LYCD ++ R++ L +
Sbjct: 697 EFKNLNKSYDFHKIFIDILNFCTIDLSALYFDIRKDSLYCDDLDSAKRINCTKVLSIVAR 756
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCH 1028
LL+ ++PI+ EE+Y + + S F H
Sbjct: 757 FLLKWLSPILVFTCEEIYQIVKKEKFKESIFLH 789
Score = 253 bits (645), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 225/438 (51%), Gaps = 26/438 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY QR K +FILHDGPPYANG HIG A+NKILKD+ +R L GK YVPGWD
Sbjct: 35 LYEQQRSQSLDKEKFILHDGPPYANGNIHIGTALNKILKDVIIRYQQLLGKNAVYVPGWD 94
Query: 67 CHGLPIELKAITSKDKL------LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
CHGLPIE K K +S ++ RK+ ++FA I QK +F+ GV DW +N
Sbjct: 95 CHGLPIEWKIEEEFKKKGKDKKNISIIEFRKECRDFASSWILKQKEQFKRLGVEGDW-NN 153
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T E + K +Y KPV WS TALA++E+EY DH S +I+
Sbjct: 154 PYTTMSTEAEAQIAVEILKFLKNGGLYNGFKPVLWSVVEATALADAEVEY-ADHKSNTIF 212
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV-----KGANV 235
K + E ++ +IWTTTPW++P N+ +AF+ EYS+ V K V
Sbjct: 213 TKFPIQGT----FESLDNVKVVIWTTTPWTIPCNRALAFSSNYEYSLVEVTQHGEKDTVV 268
Query: 236 IVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPIN--KEQRDLKLLPAGFVSSSKG 293
+ K + E + D +++ F G L+++ HP D+ LL A FV+ +G
Sbjct: 269 LATKLISEVMNSCEIEDFKIIKSFLGSNLKNVKCSHPFQLYGYDFDVPLLEADFVTLEQG 328
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL- 352
TG+VH AP+HG DDF L L I N I + G Y+ + EG++I K + L
Sbjct: 329 TGIVHIAPSHGPDDFNLGLKNNIKAENTINDHGHYT-NVIKKFEGIHIFKADKIIIEELN 387
Query: 353 VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGIT 412
+ +L + HSYP+ WR+K P++ +A+ QWFI E + K + N +
Sbjct: 388 LNKKLLGSGTLVHSYPHSWRSKAPLVHRATPQWFISMESNDLRNVALKAIDNTKFYPPVG 447
Query: 413 HDRPGTALAESELEYKPD 430
+R S +E +PD
Sbjct: 448 QNR-----LRSMIETRPD 460
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHL-VEPDVLWTENYQHSYPYDWRTKKPVI 1165
N I + G Y+ + EG++I K + L + +L + HSYP+ WR+K P++
Sbjct: 355 NTINDHGHYT-NVIKKFEGIHIFKADKIIIEELNLNKKLLGSGTLVHSYPHSWRSKAPLV 413
Query: 1166 LKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
+A+ QWFI E ++ AL ++ F P + LR I RP WCISRQR WGVPI
Sbjct: 414 HRATPQWFISMESNDLRNVALKAIDNTKFYPPVGQNRLRSMIETRPDWCISRQRFWGVPI 473
Query: 1224 PVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+F + T +++E K + + G D W+ E+ L
Sbjct: 474 PIFVNKKTHEPLIDEDVFKRIENIFLKEGSDAWFVKKDEEFL 515
>gi|392886928|ref|NP_001251317.1| Protein IARS-2, isoform a [Caenorhabditis elegans]
gi|308071956|emb|CBX25138.1| Protein IARS-2, isoform a [Caenorhabditis elegans]
Length = 1071
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 215/647 (33%), Positives = 320/647 (49%), Gaps = 83/647 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA-------TDLHALIWTTTPWSLPA 470
TALAESELEY H S S Y + KL + + A + ALIWTTTPW+LP
Sbjct: 331 TALAESELEYNDKHQSTSAYFRFKLINFSSSDVIWAHSEPSKISQFFALIWTTTPWTLPL 390
Query: 471 NQFIAFNPALEYSVASVKGA--------NVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQ 522
N I+ + A++YS+ VI +K L E FQ D C G
Sbjct: 391 NNAISVSSAIQYSLIQFDNEINNPTSTFYVIASKLLEE-----FQKSSDRKCKVVGT--- 442
Query: 523 DITYIHPINKEQRDLK----------LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 572
+ P N R K + V+ + GTGLVH A AHG D+ +A+++
Sbjct: 443 ----VKPANLIGRRYKSCWHNELGLPIYEGPHVTDTVGTGLVHTAFAHGFQDYDVAISKG 498
Query: 573 IPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKK 632
V + + ++G Y+ G L+G +LG+G+ L L+ D++ + HSYPYDWRTKK
Sbjct: 499 DRVESFVDSRGCYTRHLGHDLDGKEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKK 558
Query: 633 PVILKASQQWFIDTERIKPEALACLEEVNFVPESA--KKTLRDQIAQRPYWCISRQRVWG 690
PVI+++S+QWFID + I A L++++ + + +L+ + R WCISRQRVWG
Sbjct: 559 PVIIRSSEQWFIDVDEIGKRASMMLDDISVAAGDSDLRASLKQLVTTRKSWCISRQRVWG 618
Query: 691 VPIPVFYDGDTIIVNEANIKHFCTLI--DEHGPDFWWSLSVEQLLNT----------SDV 738
PIP D + + + + + D WW + V+++L SD+
Sbjct: 619 TPIPALVDDNGGSYTSRKLIEWVAKLTRERENTDVWWEIDVKEILENEEVRRSLEIPSDI 678
Query: 739 NSNVTKSNDILDIWFDSGISWSHVLKDKP------AHVYMEGMDQINGWFMSSLLTSVAL 792
S + K+ DI+D+W DSG++W H +D A V +EG+DQ GWF S LLTSVA+
Sbjct: 679 VSQLKKNTDIMDVWLDSGLAW-HAARDNDTEREHVADVVLEGVDQFRGWFQSLLLTSVAV 737
Query: 793 KHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDIT 852
++ P++ + +HGF +DE KMSKS+GNV+ D T +T
Sbjct: 738 QNKLPYKKIIVHGFCIDENNNKMSKSIGNVV---DPTM--------------------LT 774
Query: 853 QGAKKLPAYGVDVLRWWVAAHASKDP-TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNH 911
G+ K A G D LR+WVA S++ IG I++ V R+ R+++G
Sbjct: 775 DGSLKQKAIGADGLRFWVALSGSENAGESKIGMKIIDDVDKKVIAFRNGFRFMIGGCQGF 834
Query: 912 SESTGSIS-RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVK 970
+ +D+ ML+ Y +F++ + L F+ SA Y V+
Sbjct: 835 DGKQVKFPLKTLDIDMLQNCDAIVKRSIVNYNDFKFRTVANDLTQFLQRNFSANYVKYVR 894
Query: 971 DRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
DRLYCD + E+ +S TLH + H L ++PI+PHL+ EV HLP
Sbjct: 895 DRLYCDKVGSESHISAQFTLHRLAHNLAHIISPILPHLSSEVLQHLP 941
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 226/421 (53%), Gaps = 40/421 (9%)
Query: 3 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
G ++LYSWQ+ A F L DGPPYANG H GHA+NKILKD ++S + G RV +
Sbjct: 172 GLNDLYSWQKAARKDSEIFELLDGPPYANGEAHTGHAINKILKDFVVKSRIALGYRVLFR 231
Query: 63 PGWDCHGLPIELKAITSKDKLLS--PLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
PGWDCHGLPIELK + S PL+ R A+ A E I Q F WGV ADWE
Sbjct: 232 PGWDCHGLPIELKIGKQQGNAGSRTPLETRAAARIVADEAIGKQMNAFRRWGVTADWE-K 290
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T YV QL F L +Q +YR KPVYWSPSS TALAESELEY H S S Y
Sbjct: 291 PYVTKSPSYVAAQLDIFAKLVEQKLVYRSFKPVYWSPSSNTALAESELEYNDKHQSTSAY 350
Query: 181 LKIKLNQVPAHLLEGA-------TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA 233
+ KL + + A + ALIWTTTPW+LP N I+ + A++YS+
Sbjct: 351 FRFKLINFSSSDVIWAHSEPSKISQFFALIWTTTPWTLPLNNAISVSSAIQYSLIQFDNE 410
Query: 234 --------NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLK---- 281
VI +K L E FQ + C G + P N R K
Sbjct: 411 INNPTSTFYVIASKLLEE-----FQKSSDRKCKVVGT-------VKPANLIGRRYKSCWH 458
Query: 282 ------LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 335
+ V+ + GTGLVH A AHG D+ +A+++ V + + ++G Y+ G
Sbjct: 459 NELGLPIYEGPHVTDTVGTGLVHTAFAHGFQDYDVAISKGDRVESFVDSRGCYTRHLGHD 518
Query: 336 LEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 395
L+G +LG+G+ L L+ D++ + HSYPYDWRTKKPVI+++S+QWFID + I
Sbjct: 519 LDGKEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKKPVIIRSSEQWFIDVDEIGKR 578
Query: 396 A 396
A
Sbjct: 579 A 579
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVIL 1166
+ + ++G Y+ G L+G +LGEG+ L L+ D++ + HSYPYDWRTKKPVI+
Sbjct: 503 SFVDSRGCYTRHLGHDLDGKEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKKPVII 562
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESA--KKSLRDQIAQRPYWCISRQRVWGVPIP 1224
++S+QWFID + I A L+ ++ + + SL+ + R WCISRQRVWG PIP
Sbjct: 563 RSSEQWFIDVDEIGKRASMMLDDISVAAGDSDLRASLKQLVTTRKSWCISRQRVWGTPIP 622
Query: 1225 VFYDGDTIIVNEANIKHFCTLI--DEHGPDFWWSLPVEQLLNTSDVNSNV 1272
D + + + + + D WW + V+++L +V ++
Sbjct: 623 ALVDDNGGSYTSRKLIEWVAKLTRERENTDVWWEIDVKEILENEEVRRSL 672
>gi|257888495|ref|ZP_05668148.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
gi|257824549|gb|EEV51481.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
Length = 930
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 337/643 (52%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 189 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 244
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 245 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWENVTVLKEFAGQEMEYMTASHPFY- 299
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 300 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 357
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 358 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 416
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 417 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 475
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 476 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 535
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 536 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 595
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 596 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 625
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL +
Sbjct: 626 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVI 685
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 686 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 745
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 746 AVALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 787
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 37 KRQKLNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHG 96
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K +S + KK + +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 97 LPIEQVLANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEH-PYVTLDP 155
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++ +
Sbjct: 156 SYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVAFNVKD 214
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+E+++
Sbjct: 215 GKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLLETVQT 271
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++ V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP HG+D
Sbjct: 272 EIGWENVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAPGHGED 329
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++ K+ V++ + ++G ++ +A PG EG+ + L++ +L + +
Sbjct: 330 DYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFT 387
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 388 HSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 420
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 345 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 402
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 403 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 462
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 463 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 500
>gi|339445028|ref|YP_004711032.1| isoleucyl-tRNA synthetase [Eggerthella sp. YY7918]
gi|338904780|dbj|BAK44631.1| isoleucyl-tRNA synthetase [Eggerthella sp. YY7918]
Length = 950
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 220/639 (34%), Positives = 338/639 (52%), Gaps = 72/639 (11%)
Query: 415 RPGTALAESELEYKPDHISKSIYLKIKLNQVPAHL-LEGAT-DLHALIWTTTPWSLPANQ 472
R TALAE+E+EY D S SI++K KL+ VP G T D + LIWTTTPW+LPAN
Sbjct: 192 RCHTALAEAEIEYS-DETSPSIFVKFKLDTVPGMFETAGVTGDAYILIWTTTPWTLPANT 250
Query: 473 FIAFNPALEYSVASVKGANVIVAKCLVENL-------KWTF-QTDIDVVCDFPGQYLQDI 524
++ P +Y + G+N+I+A+ LVE + W+ + + G+ L +
Sbjct: 251 AVSLAPDADYVMVQADGSNMIMARELVEQVAEIAGWEDWSLVEEATGTLVSLKGRELTGL 310
Query: 525 TYIHPINKEQRDLK--LLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQ 582
TY P+ ++DLK ++ V+ GTG VH AP HGQDD+L+AL +P+L + +
Sbjct: 311 TYTCPV---RQDLKGTIIYGDHVTLDTGTGCVHTAPGHGQDDYLVALEFDVPLLMPVDDN 367
Query: 583 GKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQ 641
G ++ +AGP GL++ + L E L E + HSYP+ WR +PVI +A+ Q
Sbjct: 368 GCFTDEAGP-FSGLDVDEANPVIINWLRERGTLVAEKSILHSYPHCWRCHEPVIFRATDQ 426
Query: 642 WFI--DTERIKPEALACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD 698
WF+ D ++ +AL+ +E +V ++P A + +A RP WCISRQR WGVPIPVF
Sbjct: 427 WFVSMDKNSLREDALSAIENDVEWIPAWAANRIGSMVADRPDWCISRQRSWGVPIPVFKC 486
Query: 699 GD--TIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDI 751
+ + NEA L G D W++ + L + + DILD+
Sbjct: 487 AKCGSTVANEATFDAVIDLFYREGADAWFTRKPSEYLPRGTKCEVCGSMELVPEKDILDV 546
Query: 752 WFDSGISWSHVLKDK-------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLH 804
W++SG+S + VL+ + PA +Y+EG DQ GWF SSLLTS+ P+++V
Sbjct: 547 WWESGVSHTSVLRHREAEGLHFPAEMYLEGSDQHRGWFQSSLLTSMGAYGVPPYKSVMHC 606
Query: 805 GFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVD 864
GF VD +G KMSKS+GN + ++ EKS G D
Sbjct: 607 GFTVDGEGRKMSKSLGNGVDPAEVM---------EKS--------------------GAD 637
Query: 865 VLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY-- 921
VLR WVA+ S+D V I IL + + ++IR++ R+LLG L + ++T + +
Sbjct: 638 VLRLWVASVDYSQD--VSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDATDMVEDFDE 695
Query: 922 ---VDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSI 978
+D +ML RL ++ Y ++++ R + +++VN+LSA Y KDRLY ++
Sbjct: 696 LEPMDQWMLVRLSHLLADVEAAYNDYKFHLVYRAVYDYIVNDLSAVYMDATKDRLYSEAP 755
Query: 979 NGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ R + L +I VL+R +AP++ +EV+ H P
Sbjct: 756 DSPRRRAVQTVLMDILEVLVRVLAPVLSFTTDEVWEHYP 794
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 228/401 (56%), Gaps = 26/401 (6%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE-L 74
+GKP F+LHDGPPYANG HIGHA NKILKD +S+ +G YVPGWDCHG PIE +
Sbjct: 48 DGKP-FVLHDGPPYANGPIHIGHAFNKILKDFVNKSHAQRGYFTPYVPGWDCHGQPIEHM 106
Query: 75 KAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVK 131
T + ++ +D +R+ + +A + I+ Q+ F+ GV DWEH Y TF Y
Sbjct: 107 VEKTLGPEKMAKIDQPTLRRLCREWAEKYIDIQRDGFKRLGVNGDWEHP-YLTFTPNYEA 165
Query: 132 NQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAH 191
+ F +Y +YR KP++W TALAE+E+EY D S SI++K KL+ VP
Sbjct: 166 GNVEVFKKMYLDGSVYRGRKPIHWCKRCHTALAEAEIEYS-DETSPSIFVKFKLDTVPGM 224
Query: 192 L-LEGAT-DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL---- 245
G T D + LIWTTTPW+LPAN ++ P +Y + G+N+I+A+ LVE +
Sbjct: 225 FETAGVTGDAYILIWTTTPWTLPANTAVSLAPDADYVMVQADGSNMIMARELVEQVAEIA 284
Query: 246 ---KWTF-QTDIEVVCDFPGQYLQDITYIHPINKEQRDLK--LLPAGFVSSSKGTGLVHC 299
W+ + + G+ L +TY P+ ++DLK ++ V+ GTG VH
Sbjct: 285 GWEDWSLVEEATGTLVSLKGRELTGLTYTCPV---RQDLKGTIIYGDHVTLDTGTGCVHT 341
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HGQDD+L+AL +P+L + + G ++ +AGP GL++ + L E L
Sbjct: 342 APGHGQDDYLVALEFDVPLLMPVDDNGCFTDEAGP-FSGLDVDEANPVIINWLRERGTLV 400
Query: 360 TE-NYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
E + HSYP+ WR +PVI +A+ QWF+ D ++ +AL
Sbjct: 401 AEKSILHSYPHCWRCHEPVIFRATDQWFVSMDKNSLREDAL 441
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 1167
+ + G ++ +AGP GL++ + L E L E + HSYP+ WR +PVI +
Sbjct: 364 VDDNGCFTDEAGP-FSGLDVDEANPVIINWLRERGTLVAEKSILHSYPHCWRCHEPVIFR 422
Query: 1168 ASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
A+ QWF+ D ++ +AL+ +E V ++P A + +A RP WCISRQR WGVPIP
Sbjct: 423 ATDQWFVSMDKNSLREDALSAIENDVEWIPAWAANRIGSMVADRPDWCISRQRSWGVPIP 482
Query: 1225 VFYDGD--TIIVNEANIKHFCTLIDEHGPDFWWS 1256
VF + + NEA L G D W++
Sbjct: 483 VFKCAKCGSTVANEATFDAVIDLFYREGADAWFT 516
>gi|116491156|ref|YP_810700.1| isoleucyl-tRNA synthetase [Oenococcus oeni PSU-1]
gi|419858389|ref|ZP_14381062.1| isoleucyl-tRNA synthetase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421190580|ref|ZP_15647878.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB422]
gi|421191514|ref|ZP_15648788.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB548]
gi|116091881|gb|ABJ57035.1| Isoleucyl-tRNA synthetase [Oenococcus oeni PSU-1]
gi|399969632|gb|EJO03962.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB422]
gi|399971632|gb|EJO05872.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB548]
gi|410498825|gb|EKP90270.1| isoleucyl-tRNA synthetase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 921
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 328/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S++ ++ L D + ++WTTTP+++ A++ I
Sbjct: 191 SALAEAEVEYH-DLESTSLFYANRVKDGKGVL---DNDTYLVVWTTTPFTITASRGITVG 246
Query: 478 PALEYSVASVKG--ANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +Y + KG + +VAK L+E F + +V+ + G L IT HP +K
Sbjct: 247 PNFDYVLVKPKGQTSKYVVAKALLEENAARFGWKEPEVLATYKGIDLDKITVEHPWDKNI 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L ++ A V+ GTGLVH AP G+DD+ + + +P+ + ++G AG E
Sbjct: 307 TEL-VMNADHVTLDSGTGLVHTAPGFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G D V+ ++ LW TE +HSYP+DWRTKKP+I +A QWF+ E + E
Sbjct: 366 G-KFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKE 424
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L +++V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E I H
Sbjct: 425 ILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEKLIDH 484
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +HG +W+ + ++LL N N TK DI+D+WFDSG SWS V++++
Sbjct: 485 VADLFAKHGSTYWFEHTAKELLPDGYTNEHSPNGKFTKEEDIMDVWFDSGSSWSGVMQER 544
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA VY+EG DQ GWF S+++TSVA+ AP+++V GFV D+KG KMSKS+GN
Sbjct: 545 SYLDYPADVYLEGADQFRGWFNSNIITSVAVNGIAPYKSVIAQGFVFDDKGQKMSKSLGN 604
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTV 880
+IS +D+ G +++R WV + +S+D V
Sbjct: 605 IISPNDVAN-----------------------------QMGTEIVRLWVMSIDSSQD--V 633
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ K+IL + +KIR+++R+LL + S++ +D +M +F
Sbjct: 634 HVSKDILKQVSESYRKIRNTMRFLLANTEDFDPKKNSVAFSDREPIDKWMTADFNQFIKD 693
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
G + + + L+NFV N+LSAFY + KD +Y D + R S + I
Sbjct: 694 WHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTVFYEISVK 753
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L + + P +PH AEE++ +L
Sbjct: 754 LTKLLTPFLPHTAEELWENL 773
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 222/398 (55%), Gaps = 14/398 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY + + K F LHDGPPYANG HIGHA+NKI KDI +R + G YVPGWD
Sbjct: 36 LYEKRLDLNKNKAHFNLHDGPPYANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K +S D R+ A ++AL+ + QK +F+ GVL +W+ N Y T
Sbjct: 96 THGLPIEQQLTKAGYDRKSMSKADWRRLAHDYALKQVEMQKRDFKRLGVLGEWD-NPYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+ E+ Q+ F + + YIYR LKPVYWS SS +ALAE+E+EY D S S++ +
Sbjct: 155 LNPEFEAAQVRVFGAMAGKGYIYRGLKPVYWSWSSESALAEAEVEYH-DLESTSLFYANR 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG--ANVIVAKCLV 242
+ L D + ++WTTTP+++ A++ I P +Y + KG + +VAK L+
Sbjct: 214 VKDGKGVL---DNDTYLVVWTTTPFTITASRGITVGPNFDYVLVKPKGQTSKYVVAKALL 270
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E F + EV+ + G L IT HP +K +L ++ A V+ GTGLVH AP
Sbjct: 271 EENAARFGWKEPEVLATYKGIDLDKITVEHPWDKNITEL-VMNADHVTLDSGTGLVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-- 359
G+DD+ + + +P+ + ++G AG EG D V+ ++ LW
Sbjct: 330 GFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFEG-KFYDDVVPLVIEKLKKAGLWLA 388
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
TE +HSYP+DWRTKKP+I +A QWF+ E + E L
Sbjct: 389 TEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKEIL 426
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 1125 GLNILGEGKDQVLHLVEPDV----LW--TENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
G + G+ D V+ LV + LW TE +HSYP+DWRTKKP+I +A QWF+ E
Sbjct: 361 GSDFEGKFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEP 420
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 1237
+ E L ++ V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E
Sbjct: 421 FRKEILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEK 480
Query: 1238 NIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L +HG +W+ ++LL
Sbjct: 481 LIDHVADLFAKHGSTYWFEHTAKELL 506
>gi|424763057|ref|ZP_18190536.1| isoleucine--tRNA ligase [Enterococcus faecium TX1337RF]
gi|431763889|ref|ZP_19552437.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3548]
gi|402423524|gb|EJV55737.1| isoleucine--tRNA ligase [Enterococcus faecium TX1337RF]
gi|430621713|gb|ELB58465.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3548]
Length = 932
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 337/643 (52%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWENVTVLKEFAGQEMEYMTASHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 302 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 359
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 360 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 478 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 537
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 538 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 598 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL +
Sbjct: 628 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVI 687
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 688 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 748 AVALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 789
Score = 292 bits (748), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQKLNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K +S + KK + +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 99 LPIEQVLANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEH-PYVTLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++ +
Sbjct: 158 SYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVAFNVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+E+++
Sbjct: 217 GKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLLETVQT 273
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++ V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP HG+D
Sbjct: 274 EIGWENVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAPGHGED 331
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++ K+ V++ + ++G ++ +A PG EG+ + L++ +L + +
Sbjct: 332 DYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFT 389
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 390 HSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|387780303|ref|YP_005755101.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
LGA251]
gi|344177405|emb|CCC87872.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
LGA251]
Length = 917
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KVSIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILEAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T S+ VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSVPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KVSIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILEAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|116627611|ref|YP_820230.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|386086419|ref|YP_006002293.1| Isoleucyl-tRNA synthetase IleS [Streptococcus thermophilus ND03]
gi|387909516|ref|YP_006339822.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus MN-ZLW-002]
gi|122267791|sp|Q03L88.1|SYI_STRTD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|116100888|gb|ABJ66034.1| Isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|312278132|gb|ADQ62789.1| Isoleucyl-tRNA synthetase IleS [Streptococcus thermophilus ND03]
gi|387574451|gb|AFJ83157.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus MN-ZLW-002]
Length = 929
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 325/621 (52%), Gaps = 62/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +A
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLAVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G IVA L+ +L F +++V+ + G L I HP + E
Sbjct: 247 ADIEYVLVKPAGETRKFIVASELLNSLSEKFAWEEVEVLNTYRGDELNQIVTEHPWDSEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + +G +AGP
Sbjct: 307 DELVIL-GEHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVVVTVNERGIMMENAGP--- 362
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
+ G D+V +V + L E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 363 --DFAGKFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
E L +E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I
Sbjct: 421 QEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDRTPIMTEETI 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L +EHG WW + LL + N TK NDI+D+WFDSG SW+ V+
Sbjct: 481 EHVAKLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVVV 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++P A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+
Sbjct: 541 NRPELTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ D+ + +G ++LR WV + + +
Sbjct: 601 GNTIAPSDVEK-----------------------------QFGAEILRLWVTSVDTSN-D 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V I +IL+ + +KIR++LR+L+ + + +T +++ R VD YM R +
Sbjct: 631 VRISMDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVK 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F++ + L+NF+ ELSAFY KD +Y +S R ++I
Sbjct: 691 NIRDAYENFEFLTIYKSLVNFINVELSAFYLDFAKDVVYIESAKSLERRQMQTVFYDILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
+ + + PI+PH AEE++S+L
Sbjct: 751 KITKLLTPILPHTAEEIWSYL 771
Score = 261 bits (666), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 226/402 (56%), Gaps = 20/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G ++PG
Sbjct: 34 AKVYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ +A +EY + G IVA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLAVGADIEYVLVKPAGETRKFIVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F ++EV+ + G L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFAWEEVEVLNTYRGDELNQIVTEHPWDSEVDELVIL-GEHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--- 356
AP G+DD+ + +A + V+ + +G +AGP + G D+V +V
Sbjct: 328 APGFGEDDYNVGVANGLEVVVTVNERGIMMENAGP-----DFAGKFYDKVAPIVMEKLGD 382
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 383 LLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 10/160 (6%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP + G+ D+V +V + L E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGP-----DFAGKFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E V F E K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY D T I+ E I+H L +EHG WW + LL
Sbjct: 465 IFYAEDRTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|15829138|ref|NP_326498.1| isoleucyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
gi|81532810|sp|Q98PQ2.1|SYI_MYCPU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|14090082|emb|CAC13840.1| ISOLEUCYL-TRNA SYNTHETASE (ISOLEUCINE--TRNA LIGASE) (ILERS)
[Mycoplasma pulmonis]
Length = 888
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 211/608 (34%), Positives = 326/608 (53%), Gaps = 48/608 (7%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY DH+S SIY + + + D LIWTTTPW+L AN +A
Sbjct: 196 SALAEAEVEY-YDHVSPSIYTCFTITKGNEFV---EVDDELLIWTTTPWTLIANSGVAVG 251
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
+EYS N IVA L+E + F VV F G+ L + Y PI +
Sbjct: 252 LDIEYSKVKFNKKNYIVASDLLEKVMEIFGVQKYKVVDTFKGKNLLGVEYQRPIKTDL-- 309
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
++ AG+ VS GTGLVH AP G+DDF++ ++ + I + G + + G +G
Sbjct: 310 FGIVVAGYHVSIDAGTGLVHMAPLFGEDDFIIGQENELDQIMHINDDGSINSE-GDEFQG 368
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
L ++ +E + V++ E + HSYP+DWRTKKP+I + + QWF+ ++IKP
Sbjct: 369 L-FYSSANIKIKEFLEKNDKVMFFEYFTHSYPHDWRTKKPIIFRGTPQWFVSIDKIKPAI 427
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEANI-KHF 712
L +E++ P A K L I R W ISRQR WGVPIP+FY+ IVN+ + H
Sbjct: 428 LKEIEKIEGRPSWAVKRLATMIENRKTWTISRQRSWGVPIPIFYNEKNEIVNDEKVFDHV 487
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK---PAH 769
L++++G D W+ SV++LL + N N TK +I+D+WFDSG + V + P
Sbjct: 488 IELVEKYGSDVWFEKSVDELLPSEYKNKNWTKETNIMDVWFDSGSTSIGVEIEGVSVPFD 547
Query: 770 VYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDIT 829
+Y+EG+DQ GWF SS++ SVA +P+R + HGFV+D KG KMSK +GNV+ +I
Sbjct: 548 LYLEGIDQYRGWFNSSIINSVAYWGQSPYRLLLSHGFVLDGKGKKMSKQLGNVVDPQEII 607
Query: 830 QGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNS 889
Q YG D+LR WVA + V + ++I+
Sbjct: 608 Q-----------------------------KYGADILRLWVA-NCEYAHDVSVSESIIKQ 637
Query: 890 SQDDVQKIRSSLRYLLGVLHNHSESTGSIS-RYVDVYMLKRLCEFQNTMDTLYGEFQYAR 948
+ ++ +KIR+++++LLG L ++ S ++ + + +RL + + + Y ++ +
Sbjct: 638 TVENYRKIRNTIKFLLGNLQDYDHSKFNLKLEGIHELINERLKKVKFDILQAYNDYDFND 697
Query: 949 ASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHL 1008
+ L NF+ +LS+FY ++ KD LY D IN + R + ++NI L +APIMP
Sbjct: 698 VIKTLTNFLT-DLSSFYLSISKDSLYADKINSKERRMIQYNMYNILEATLVVIAPIMPTT 756
Query: 1009 AEEVYSHL 1016
AE+ Y +
Sbjct: 757 AEDAYDNF 764
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 163/408 (39%), Positives = 230/408 (56%), Gaps = 18/408 (4%)
Query: 20 EFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS 79
+F++HDGPPYANG+ HIGHA+NKILKDI +R LQG +VPGWD HGLPIE K ++
Sbjct: 53 QFVVHDGPPYANGSIHIGHALNKILKDIVVRFKSLQGFYSPFVPGWDTHGLPIENKMLSE 112
Query: 80 ---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
K + + +RK+A +AL + QK +F +L+D+E Y T DK + QL
Sbjct: 113 LKVNHKQIEVVKLRKEAAKYALNQMLIQKEQFLKLQMLSDFEE-IYLTLDKNFEAKQLKL 171
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGA 196
F ++ IY+ LKPVYWSPSS +ALAE+E+EY DHVS SIY + + +
Sbjct: 172 FKKMFFDGLIYKGLKPVYWSPSSMSALAEAEVEY-YDHVSPSIYTCFTITKGNEFV---E 227
Query: 197 TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD-IEV 255
D LIWTTTPW+L AN +A +EYS N IVA L+E + F +V
Sbjct: 228 VDDELLIWTTTPWTLIANSGVAVGLDIEYSKVKFNKKNYIVASDLLEKVMEIFGVQKYKV 287
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAE 314
V F G+ L + Y PI + ++ AG+ VS GTGLVH AP G+DDF++
Sbjct: 288 VDTFKGKNLLGVEYQRPIKTDL--FGIVVAGYHVSIDAGTGLVHMAPLFGEDDFIIGQEN 345
Query: 315 KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWR 372
++ + I + G + + G +GL ++ +E + V++ E + HSYP+DWR
Sbjct: 346 ELDQIMHINDDGSINSE-GDEFQGL-FYSSANIKIKEFLEKNDKVMFFEYFTHSYPHDWR 403
Query: 373 TKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRPGTAL 420
TKKP+I + + QWF+ ++IKP L K + I GR R T +
Sbjct: 404 TKKPIIFRGTPQWFVSIDKIKPAIL--KEIEKIEGRPSWAVKRLATMI 449
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Query: 1144 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRD 1203
V++ E + HSYP+DWRTKKP+I + + QWF+ ++IKP L +E + P A K L
Sbjct: 388 VMFFEYFTHSYPHDWRTKKPIIFRGTPQWFVSIDKIKPAILKEIEKIEGRPSWAVKRLAT 447
Query: 1204 QIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEANI-KHFCTLIDEHGPDFWWSLPVEQL 1262
I R W ISRQR WGVPIP+FY+ IVN+ + H L++++G D W+ V++L
Sbjct: 448 MIENRKTWTISRQRSWGVPIPIFYNEKNEIVNDEKVFDHVIELVEKYGSDVWFEKSVDEL 507
Query: 1263 LNTSDVNSNVTK 1274
L + N N TK
Sbjct: 508 LPSEYKNKNWTK 519
>gi|421187178|ref|ZP_15644554.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB418]
gi|399964005|gb|EJN98660.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB418]
Length = 921
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 328/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S++ ++ L D + ++WTTTP+++ A++ I
Sbjct: 191 SALAEAEVEYH-DLESTSLFYANRVKDGKGVL---DNDTYLVVWTTTPFTITASRGITVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +Y + KG +VAK L+E F + +V+ + G L IT HP +K
Sbjct: 247 PNFDYVLVKPKGQTRKYVVAKALLEENAARFGWGEPEVLATYKGIDLDKITVEHPWDKNI 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L ++ A V+ GTGLVH AP G+DD+ + + +P+ + ++G AG E
Sbjct: 307 TEL-VMNADHVTLDSGTGLVHTAPGFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G D V+ ++ LW TE +HSYP+DWRTKKP+I +A QWF+ E + E
Sbjct: 366 G-KFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKE 424
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L +++V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E I H
Sbjct: 425 ILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEKLIDH 484
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +HG +W+ + ++LL N N TK DI+D+WFDSG SWS V++++
Sbjct: 485 VADLFAKHGSTYWFEHTAKELLPDGYTNEHSPNGKFTKEEDIMDVWFDSGSSWSGVMQER 544
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA VY+EG DQ GWF S+++TSVA+ AP+++V GFV D+KG KMSKS+GN
Sbjct: 545 SYLDYPADVYLEGADQFRGWFNSNIITSVAVNGIAPYKSVIAQGFVFDDKGQKMSKSLGN 604
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTV 880
+IS +D+ G +++R WV + +S+D V
Sbjct: 605 IISPNDVAN-----------------------------QMGAEIVRLWVMSIDSSQD--V 633
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ K+IL + +KIR+++R+LL + S++ + +D +M +F
Sbjct: 634 HVSKDILKQVSESYRKIRNTMRFLLANTEDFDPKKNSVAFSDRKPIDKWMTADFNQFIKD 693
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
G + + + L+NFV N+LSAFY + KD +Y D + R S + I
Sbjct: 694 WHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTVFYEISVK 753
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L + + P +PH AEE++ +L
Sbjct: 754 LTKLLTPFLPHTAEELWENL 773
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 221/398 (55%), Gaps = 14/398 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY + + K F LHDGPPYANG HIGHA+NKI KDI +R + G YVPGWD
Sbjct: 36 LYEKRLDLNKNKAHFNLHDGPPYANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K +S D R+ A ++AL+ + QK +F+ GVL +W+ N Y T
Sbjct: 96 THGLPIEQQLTKAGYDRKSMSKADWRRLAHDYALKQVEMQKRDFKRLGVLGEWD-NPYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+ E+ Q+ F + + YIYR LKPVYWS SS +ALAE+E+EY D S S++ +
Sbjct: 155 LNPEFEAAQVRVFGAMAGKGYIYRGLKPVYWSWSSESALAEAEVEYH-DLESTSLFYANR 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLV 242
+ L D + ++WTTTP+++ A++ I P +Y + KG +VAK L+
Sbjct: 214 VKDGKGVL---DNDTYLVVWTTTPFTITASRGITVGPNFDYVLVKPKGQTRKYVVAKALL 270
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E F + EV+ + G L IT HP +K +L ++ A V+ GTGLVH AP
Sbjct: 271 EENAARFGWGEPEVLATYKGIDLDKITVEHPWDKNITEL-VMNADHVTLDSGTGLVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-- 359
G+DD+ + + +P+ + ++G AG EG D V+ ++ LW
Sbjct: 330 GFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFEG-KFYDDVVPLVIEKLKKAGLWLA 388
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
TE +HSYP+DWRTKKP+I +A QWF+ E + E L
Sbjct: 389 TEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKEIL 426
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 1125 GLNILGEGKDQVLHLVEPDV----LW--TENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
G + G+ D V+ LV + LW TE +HSYP+DWRTKKP+I +A QWF+ E
Sbjct: 361 GSDFEGKFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEP 420
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 1237
+ E L ++ V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E
Sbjct: 421 FRKEILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEK 480
Query: 1238 NIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L +HG +W+ ++LL
Sbjct: 481 LIDHVADLFAKHGSTYWFEHTAKELL 506
>gi|294848186|ref|ZP_06788933.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
gi|294824986|gb|EFG41408.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
Length = 917
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (687), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|326202019|ref|ZP_08191889.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
gi|325987814|gb|EGD48640.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
Length = 929
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 204/622 (32%), Positives = 325/622 (52%), Gaps = 55/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFI 474
TALAE+E+EY D + SIY+K ++ + EG ++ +IWTTT W+LPAN I
Sbjct: 194 TALAEAEIEY-ADDTTVSIYVKFQVRDDKG-IFEGVAPKEKINFVIWTTTTWTLPANLAI 251
Query: 475 AFNPALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
N + EYSV ++A LVEN +K T+ + V F G L+ I HP
Sbjct: 252 CLNESFEYSVVKANDEYYVLAAELVENTMKAAAITEYETVAKFKGSELEGILCKHPFL-- 309
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD ++ V+ GTG VH AP HG +DFL+ KIPVL + ++G + +AGP
Sbjct: 310 DRDSLVILGDHVTLEAGTGCVHTAPGHGAEDFLVCQKYKIPVLVPVDSKGFLTKEAGP-F 368
Query: 594 EGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G+ + L + +L +E+ H YP+ WR K P+I +A++QWF + +
Sbjct: 369 AGMFYKKSNPAIIEKLTQDGRLLASESITHQYPHCWRCKDPIIFRATEQWFASIDSFRDA 428
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
AL ++ V +VPE ++ + + + R WCISRQR+WGVPIP+FY D ++ + +IK
Sbjct: 429 ALEAIKTVKWVPEWGQERITNMVRDRGDWCISRQRIWGVPIPIFYCKDCGKELITDESIK 488
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDV----NSNVTKSNDILDIWFDSGISWSHVLKDK 766
L G + W+++ ++L + +K DI+D+WFDSG S VL+++
Sbjct: 489 AVAELFRVKGSNAWYAMDASEILPKGTKCGCGHDEFSKETDIMDVWFDSGSSHVAVLENR 548
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLTSVA + AP++ V HG+V+DE+ KMSKS+GN
Sbjct: 549 EGLSWPADLYLEGSDQHRGWFQSSLLTSVATRKGAPYKKVLTHGYVIDEEKRKMSKSLGN 608
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I D+ + YG D+LR WVA+ + +
Sbjct: 609 GIDPADV-----------------------------IKEYGADILRLWVAS-SDYTTDIK 638
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I K++L + +KIR++ RY+LG ++ + T S+ +D + L ++ +
Sbjct: 639 ISKDLLKQLSEVYRKIRNTARYILGNINGFNPDTDSVDYSELSELDRWALYKMTNLIKKV 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y +++ + NF V ++S FY ++KDRLY + + R + ++ I L
Sbjct: 699 NEAYSGYEFHMMFHAIHNFCVVDMSNFYLDIIKDRLYTSKPDSKERRAAQTVMYEILQSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSR 1019
+R + P++ EE++ ++P R
Sbjct: 759 VRMLTPVLAFTTEEIWQYMPHR 780
Score = 273 bits (697), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 160/406 (39%), Positives = 228/406 (56%), Gaps = 15/406 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y+ Q + GKP FILHDGPPYANG H+G ++NKILKDI ++ + G YVPGW
Sbjct: 37 DIYNKQLKKAEGKPSFILHDGPPYANGGIHLGTSLNKILKDIVVKYKSMSGYYTPYVPGW 96
Query: 66 DCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +AI K + P+ R+ + FA++ ++ Q+ F+ GV ADWEH Y
Sbjct: 97 DTHGLPIEQRAIKELGLKRHEVGPVVFREACEGFAMKYLDIQRESFKRLGVRADWEHP-Y 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F + K+ +IY+ LKPVYW P TALAE+E+EY D + SIY+K
Sbjct: 156 VTLKPEFEAKQIEVFGEMAKKGHIYKGLKPVYWCPECETALAEAEIEY-ADDTTVSIYVK 214
Query: 183 IKLNQVPAHLLEGAT---DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
++ + EG ++ +IWTTT W+LPAN I N + EYSV ++A
Sbjct: 215 FQVRDDKG-IFEGVAPKEKINFVIWTTTTWTLPANLAICLNESFEYSVVKANDEYYVLAA 273
Query: 240 CLVE-SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
LVE ++K T+ E V F G L+ I HP RD ++ V+ GTG VH
Sbjct: 274 ELVENTMKAAAITEYETVAKFKGSELEGILCKHPFL--DRDSLVILGDHVTLEAGTGCVH 331
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-V 357
AP HG +DFL+ KIPVL + ++G + +AGP G+ + L + +
Sbjct: 332 TAPGHGAEDFLVCQKYKIPVLVPVDSKGFLTKEAGP-FAGMFYKKSNPAIIEKLTQDGRL 390
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTV 402
L +E+ H YP+ WR K P+I +A++QWF + + AL KTV
Sbjct: 391 LASESITHQYPHCWRCKDPIIFRATEQWFASIDSFRDAALEAIKTV 436
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 1144 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRD 1203
+L +E+ H YP+ WR K P+I +A++QWF + + AL ++ V +VPE ++ + +
Sbjct: 390 LLASESITHQYPHCWRCKDPIIFRATEQWFASIDSFRDAALEAIKTVKWVPEWGQERITN 449
Query: 1204 QIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQ 1261
+ R WCISRQR+WGVPIP+FY D ++ + +IK L G + W+++ +
Sbjct: 450 MVRDRGDWCISRQRIWGVPIPIFYCKDCGKELITDESIKAVAELFRVKGSNAWYAMDASE 509
Query: 1262 LL 1263
+L
Sbjct: 510 IL 511
>gi|94264111|ref|ZP_01287910.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
gi|93455527|gb|EAT05717.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
Length = 949
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 228/667 (34%), Positives = 341/667 (51%), Gaps = 78/667 (11%)
Query: 395 EALVCKTVGNILGRVGITHDRP--------GTALAESELEYKPDHISKSIYLKI-----K 441
EA + + N L I+ R TALAE+E+EY H S SIY+K
Sbjct: 161 EAAIAREFNNFLLNGAISRSRKPVHWCASCTTALAEAEVEYAEQH-SPSIYVKFPLAPAA 219
Query: 442 LNQVPAHLLEGATD---LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 498
+ + A + E A D L +IWTTTPW+LPAN +A +P Y+ G +I+A L
Sbjct: 220 VASLAAAVPELAVDERPLAVVIWTTTPWTLPANLAVALHPDFTYAAVEHDGEILIMAAEL 279
Query: 499 VEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 557
VE + +D ++ FP L + HP+ + Q L+ A +V+ G+G VH A
Sbjct: 280 VERVMAECGLSDYKLLASFPAAALLGQSCRHPLLERQS--LLIAADYVTLESGSGCVHTA 337
Query: 558 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 617
P HG+DD+L L +P+L+ + +G ++ +AGP EGL IL K + L L
Sbjct: 338 PGHGRDDYLSGLKHNLPILSPVDERGHFTAEAGP-YEGLFILKGNKRIIADLQAGGALLG 396
Query: 618 EN-YQHSYPYDWRTKKPVILKASQQWFI--------DTER-IKPEALACLEEVNFVPESA 667
E HSYP+ WR KKPV+ +A++QWFI D E+ ++ ALA ++EV ++P
Sbjct: 397 EQAITHSYPHCWRCKKPVMFRATEQWFIAMDAACGDDPEQTLRRRALAAIDEVEWIPRWG 456
Query: 668 KKTLRDQIAQRPYWCISRQRVWGVPI-PVFYDGDTIIVNEANIKHFCT-LIDEHGPDFWW 725
++ ++ +A RP WC+SRQR WGVP+ V+ ++N+ I T + G D W+
Sbjct: 457 RERIQAMVAGRPDWCLSRQRSWGVPLTAVWCKACGRVLNDEKIAATITEIFTREGADAWF 516
Query: 726 SLSVEQLL----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMD 776
+ + + S ++ K DILD+WFDSG+S++ VL+ + PA +Y+EG D
Sbjct: 517 ARPLADFIGPDARCSCGATDFAKEEDILDVWFDSGVSFAAVLEQRDELTSPADLYLEGSD 576
Query: 777 QINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLP 836
Q GWF SSLL SV + AP++ V HGFVVD +G KMSKSVGNVI+ I +
Sbjct: 577 QHRGWFQSSLLASVGTRGAAPYKAVLTHGFVVDGQGKKMSKSVGNVIAPDKIIK------ 630
Query: 837 AYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQK 896
+G ++LR W A+ +D + I +NIL D +K
Sbjct: 631 -----------------------QHGAEILRLWAASEDYRD-DIRISENILRQLADAYRK 666
Query: 897 IRSSLRYLLGVLHN-----HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASR 951
R+++R++LG LH+ H ++ +D ++L R F+ Y +F++ +
Sbjct: 667 TRNTIRFMLGNLHDFEPARHRRPAEGMAE-LDRWILARFELFRQKSQESYDKFEFHQFYH 725
Query: 952 VLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEE 1011
L NF LSA Y +VKDRLY R L+ I LLR +AP++ LA E
Sbjct: 726 QLYNFCTVSLSALYLDIVKDRLYILPPADPRRRDAQSVLYEICDGLLRLLAPVLSFLAAE 785
Query: 1012 VYSHLPS 1018
+ HLP+
Sbjct: 786 AWEHLPA 792
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/395 (41%), Positives = 221/395 (55%), Gaps = 18/395 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY A G+P +ILHDGPPYANG H+GHA+NKILKDI L++ + G YVPGW
Sbjct: 35 DLYGAIDRATAGRPLYILHDGPPYANGHLHMGHALNKILKDIILKAKRMSGYHCPYVPGW 94
Query: 66 DCHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
DCHGLPIEL K + SK + L R+ + +A + I Q+ EF GVL DW+ Y
Sbjct: 95 DCHGLPIELNVDKELGSKKAEVDKLAFRETCRRYAAKWIAIQREEFARLGVLGDWQQP-Y 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y +F N I R KPV+W S TALAE+E+EY H S SIY+K
Sbjct: 154 LTIDYSYEAAIAREFNNFLLNGAISRSRKPVHWCASCTTALAEAEVEYAEQH-SPSIYVK 212
Query: 183 I-----KLNQVPAHLLEGATD---LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
+ + A + E A D L +IWTTTPW+LPAN +A +P Y+ G
Sbjct: 213 FPLAPAAVASLAAAVPELAVDERPLAVVIWTTTPWTLPANLAVALHPDFTYAAVEHDGEI 272
Query: 235 VIVAKCLVES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKG 293
+I+A LVE + +D +++ FP L + HP+ + Q L+ A +V+ G
Sbjct: 273 LIMAAELVERVMAECGLSDYKLLASFPAAALLGQSCRHPLLERQS--LLIAADYVTLESG 330
Query: 294 TGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV 353
+G VH AP HG+DD+L L +P+L+ + +G ++ +AGP EGL IL K + L
Sbjct: 331 SGCVHTAPGHGRDDYLSGLKHNLPILSPVDERGHFTAEAGP-YEGLFILKGNKRIIADLQ 389
Query: 354 EPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI 387
L E HSYP+ WR KKPV+ +A++QWFI
Sbjct: 390 AGGALLGEQAITHSYPHCWRCKKPVMFRATEQWFI 424
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPV 1164
L+ + +G ++ +AGP EGL IL K + L L E HSYP+ WR KKPV
Sbjct: 356 LSPVDERGHFTAEAGP-YEGLFILKGNKRIIADLQAGGALLGEQAITHSYPHCWRCKKPV 414
Query: 1165 ILKASQQWFI--------DTER-IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISR 1215
+ +A++QWFI D E+ ++ ALA ++ V ++P ++ ++ +A RP WC+SR
Sbjct: 415 MFRATEQWFIAMDAACGDDPEQTLRRRALAAIDEVEWIPRWGRERIQAMVAGRPDWCLSR 474
Query: 1216 QRVWGVPI-PVFYDGDTIIVNEANIKHFCT-LIDEHGPDFWWSLPVEQLLN 1264
QR WGVP+ V+ ++N+ I T + G D W++ P+ +
Sbjct: 475 QRSWGVPLTAVWCKACGRVLNDEKIAATITEIFTREGADAWFARPLADFIG 525
>gi|418663174|ref|ZP_13224699.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-122]
gi|418955382|ref|ZP_13507322.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-189]
gi|375034807|gb|EHS27957.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-122]
gi|375370865|gb|EHS74657.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-189]
Length = 853
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 127 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 180
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 181 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 238
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 239 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 297
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 298 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 356
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 357 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 416
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 417 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 476
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 477 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 536
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 537 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 566
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 567 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 626
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 627 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 686
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 687 DMTKLLAPILVHTAEEVWSHTP 708
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 212/372 (56%), Gaps = 22/372 (5%)
Query: 36 IGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSKD---KLLSPLDIRKK 92
+GHA+NKILKD +R +QG YVPGWD HGLPIE +A+T K K +S + R+K
Sbjct: 1 MGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKKMSTAEFREK 59
Query: 93 AKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKP 152
K FALE I QK +F GV D+ ++ Y T EY Q+ F + + IY+ KP
Sbjct: 60 CKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 118
Query: 153 VYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWS 210
VYWSPSS ++LAE+E+EY D S SIY+ + +G D A +IWTTTPW+
Sbjct: 119 VYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWT 172
Query: 211 LPANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTFQTDIEVVCDFPGQYLQD 266
+P+N I +P L+Y +V G I+A+ L E+L W + I++ ++ G+ L+
Sbjct: 173 IPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEY 231
Query: 267 ITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQG 326
+ HP R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G
Sbjct: 232 VVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKG 289
Query: 327 KYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQW 385
++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QW
Sbjct: 290 VFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQW 348
Query: 386 FIDTERIKPEAL 397
F +++ + L
Sbjct: 349 FASISKVRQDIL 360
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 285 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 343
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 344 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 403
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 404 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 440
>gi|389632789|ref|XP_003714047.1| isoleucyl-tRNA synthetase [Magnaporthe oryzae 70-15]
gi|351646380|gb|EHA54240.1| isoleucyl-tRNA synthetase [Magnaporthe oryzae 70-15]
gi|440489494|gb|ELQ69142.1| isoleucyl-tRNA synthetase [Magnaporthe oryzae P131]
Length = 974
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 212/617 (34%), Positives = 323/617 (52%), Gaps = 44/617 (7%)
Query: 430 DHISKSIYLKIKLN-QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK 488
+H+S + Y+K+ L + A L+ +T L +IWTTTPW+LPANQ IA + L Y ++
Sbjct: 204 NHVSLAAYVKMPLTGDLEALGLDPSTSL--VIWTTTPWTLPANQAIAVHKDLVYLAVKLR 261
Query: 489 GANVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVS 546
G +I+ + + D+ VV G+ L ++Y++ + + + ++ A FVS
Sbjct: 262 GETMIIGADALGRMSEIMAPDVPVVLTSLVGEQLLAVSYLNQLQGSKAQPQPIIHADFVS 321
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-------LEGLNIL 599
+ G+GLVH AP HG +D+ + + +P ++ + G ++ D P G ++L
Sbjct: 322 ADSGSGLVHLAPGHGFEDYEVCKSLGLPAVSAVDGAGIFAKDVCPANTEIPREGAGADVL 381
Query: 600 GDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEE 659
G ++ ++ DVL + ++H YPYDWRTKKP++++A+ QWF D IK AL L++
Sbjct: 382 KGGSKAIIKILGRDVLHSHKHKHKYPYDWRTKKPIVVRATAQWFADVASIKESALDALKD 441
Query: 660 VNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-----IIVNEANIKHFCT 714
V F+P + + L I R WCISRQR WGVPIP FYD D I+ E I H
Sbjct: 442 VKFIPAAGQTRLESFIKGRSEWCISRQRAWGVPIPAFYDNDIADGGEAIMTEETIDHVIK 501
Query: 715 LIDEHGPDFWWSLSVEQ--LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKPAHVYM 772
+++ G D WWS + ++ + S N+ + D +D+WFDSG SW+ + A VY+
Sbjct: 502 TVEQRGVDAWWSDAADEPAWIPESLRGRNLRRGTDTMDVWFDSGSSWTQT--EGRADVYL 559
Query: 773 EGMDQINGWFMSSLLTSVALK------HTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAH 826
EG DQ GWF SSLLT VA + APF+N+ HGF +D G KMSKS+GNVIS
Sbjct: 560 EGTDQHRGWFQSSLLTKVATRADENSAQKAPFKNLITHGFTLDAHGKKMSKSLGNVISPM 619
Query: 827 DITQG---AKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA-SKDPTVPI 882
D+ +G A + P K + + A G D LR VA+ +KD + I
Sbjct: 620 DVIEGKLLAPRKPGRNKQRKKT-QEKNQSDPAATHEVLGPDALRLLVASSDYTKD--IVI 676
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYG 942
+ L+S ++K RS+ + LLG + + VD + L + + + Y
Sbjct: 677 SERALSSIHTSLRKFRSTFKILLGSMQQPPRQEPFDA--VDQIAMLHLKDALSQVGKHYD 734
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYC--DSINGEARLSGLHTLHNIFHVLLRT 1000
F++ + VL ++V +LSA Y VKD+LYC D+ N A L IF R
Sbjct: 735 SFEFYKGFAVLNHWVSQQLSAIYLEAVKDKLYCGGDAANATA------ALVPIFDGFCRM 788
Query: 1001 VAPIMPHLAEEVYSHLP 1017
+AP+ P + EE + H P
Sbjct: 789 LAPMAPLVVEEAWDHAP 805
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/408 (41%), Positives = 246/408 (60%), Gaps = 22/408 (5%)
Query: 6 ELYSWQREALNGKPE---FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
ELY WQ +PE FILHDGPPYANG H+GHA+NKILKD+ LR + QG RV YV
Sbjct: 35 ELYKWQ---ATNRPESNPFILHDGPPYANGDLHVGHALNKILKDMILRVKVQQGHRVKYV 91
Query: 63 PGWDCHGLPIELKAITSK---DKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
PGWDCHGLPIELKA+ + + ++P ++R A+ A T+ +Q F+ +GV+ADW+
Sbjct: 92 PGWDCHGLPIELKALGGRAEGQEQMTPAEVRALARELAATTVESQMRGFQEFGVMADWDQ 151
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+ T YV +QL F + + IYR KPVYWS SSRTALAE+ELEY+ +HVS +
Sbjct: 152 R-WETMQPSYVADQLRLFQRMVSRGLIYRRHKPVYWSSSSRTALAEAELEYEENHVSLAA 210
Query: 180 YLKIKL-NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA 238
Y+K+ L + A L+ +T L +IWTTTPW+LPANQ IA + L Y ++G +I+
Sbjct: 211 YVKMPLTGDLEALGLDPSTSL--VIWTTTPWTLPANQAIAVHKDLVYLAVKLRGETMIIG 268
Query: 239 KCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGL 296
+ + D+ VV G+ L ++Y++ + + + ++ A FVS+ G+GL
Sbjct: 269 ADALGRMSEIMAPDVPVVLTSLVGEQLLAVSYLNQLQGSKAQPQPIIHADFVSADSGSGL 328
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-------LEGLNILGDGKDQV 349
VH AP HG +D+ + + +P ++ + G ++ D P G ++L G +
Sbjct: 329 VHLAPGHGFEDYEVCKSLGLPAVSAVDGAGIFAKDVCPANTEIPREGAGADVLKGGSKAI 388
Query: 350 LHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ ++ DVL + ++H YPYDWRTKKP++++A+ QWF D IK AL
Sbjct: 389 IKILGRDVLHSHKHKHKYPYDWRTKKPIVVRATAQWFADVASIKESAL 436
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Query: 1125 GLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 1184
G ++L G ++ ++ DVL + ++H YPYDWRTKKP++++A+ QWF D IK AL
Sbjct: 377 GADVLKGGSKAIIKILGRDVLHSHKHKHKYPYDWRTKKPIVVRATAQWFADVASIKESAL 436
Query: 1185 ACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-----IIVNEANI 1239
L+ V F+P + + L I R WCISRQR WGVPIP FYD D I+ E I
Sbjct: 437 DALKDVKFIPAAGQTRLESFIKGRSEWCISRQRAWGVPIPAFYDNDIADGGEAIMTEETI 496
Query: 1240 KHFCTLIDEHGPDFWWS 1256
H +++ G D WWS
Sbjct: 497 DHVIKTVEQRGVDAWWS 513
>gi|431758416|ref|ZP_19547043.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3083]
gi|430617474|gb|ELB54347.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3083]
Length = 932
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 337/643 (52%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 247 PKFTYLLVEADGRKFVVAKDLLE----TVQTEIGWENVTVLKEFAGQEMEYMTASHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 302 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 359
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 360 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 478 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 537
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 538 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 598 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL +
Sbjct: 628 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVI 687
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 688 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 748 AVALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 789
Score = 292 bits (747), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
+R+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 KRQKLNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K +S + KK + +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 99 LPIEQVLANKGVKRKEMSMAEYLKKCREYALSQVDKQREDFKRLGVAGDWEH-PYVTLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++ +
Sbjct: 158 SYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVAFNVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+E+++
Sbjct: 217 GKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYLLVEADGRKFVVAKDLLETVQT 273
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++ V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP HG+D
Sbjct: 274 EIGWENVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAPGHGED 331
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++ K+ V++ + ++G ++ +A PG EG+ + L++ +L + +
Sbjct: 332 DYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFT 389
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 390 HSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|418280884|ref|ZP_12893706.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
gi|365166985|gb|EHM58462.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
Length = 917
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKILLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|422849171|ref|ZP_16895847.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK115]
gi|325690192|gb|EGD32196.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK115]
Length = 930
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 208/624 (33%), Positives = 321/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F TD+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWTDVQVLDTYRGQELNQIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
S D+ + +G ++LR WV + S + V I
Sbjct: 605 SPSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILGQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYEDLRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L + F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEEEEF 778
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 223/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP F+LHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFVLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTSDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVQVLDTYRGQELNQIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|451997524|gb|EMD89989.1| hypothetical protein COCHEDRAFT_1138808 [Cochliobolus heterostrophus
C5]
Length = 1015
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 341/651 (52%), Gaps = 60/651 (9%)
Query: 418 TALAESELEYKPDHISKSIYLK--IKLNQ-VPAHLLEGATD-LHALIWTTTPWSLPANQF 473
TALAE+ELEY S + +++ +KL++ + A +L+ D + +IWTTTPW+LPAN+
Sbjct: 203 TALAEAELEYDEGFKSLAAFVRYPVKLSEALKAGVLKNVEDEVSVVIWTTTPWTLPANKA 262
Query: 474 IAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQD-ITYIH 528
IA + ++Y + G N +++A + + + +++V + G L + + Y +
Sbjct: 263 IAVHRDMQYCIVKDAGNNNELILIATSRIPEYEKILEHKLEIVISELRGSDLANQVQYEN 322
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPD 588
P K ++ A FV+ S GTGLVH AP HG DD+ + IP + + G ++ D
Sbjct: 323 PFQKASGLQPIIHADFVTDSSGTGLVHLAPGHGMDDYNVCTPLGIPAFAPVDDAGAFTKD 382
Query: 589 AGPG----LEGL---NILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKAS 639
A P LEGL +I G + V + ++ L +NY+H YP DWRTK+PVI +A+
Sbjct: 383 AFPEQPDLLEGLPVTDIKKSGSNAVCNYLQKLGLLRAKQNYRHKYPIDWRTKEPVITRAT 442
Query: 640 QQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-- 697
+QWF + E IK ++ + V F PES + L I R WCISRQR WGVPIP Y
Sbjct: 443 EQWFANVEGIKDASMKAIANVAFKPESGRSRLESFIQGRSQWCISRQRAWGVPIPALYKV 502
Query: 698 DGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-NTSDVNSNVTKSNDILDIWFD 754
+GD + ++ I+H +I E G + WW+ + + S +N + D +D+WFD
Sbjct: 503 EGDRLEAAMDSKVIEHVIQVIKERGINAWWTDAPDDAAWKPSHLNGTYVRGRDTMDVWFD 562
Query: 755 SGISWSHV--LKDKP-AHVYMEGMDQINGWFMSSLLTSVALKH------TAPFRNVFLHG 805
SG SW+ + +D+P A VY+EG DQ GWF SSLLT VA + AP++ + HG
Sbjct: 563 SGTSWTLLPRRQDEPVADVYLEGTDQHRGWFQSSLLTHVATQPYSTATVKAPYKTLITHG 622
Query: 806 FVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAY---G 862
F +D G KMSKS+GNVIS I G P K V GA++ P Y G
Sbjct: 623 FTLDSDGRKMSKSLGNVISPFQIMSGELLPPVKRKKQKGVKQ----DAGARQAPTYDSMG 678
Query: 863 VDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS---------- 912
D LR W AA + V IG+ +L S + K R + ++LLG+ S
Sbjct: 679 ADALRLW-AASSDYTRDVTIGQPLLMSVNQALHKYRVTFKWLLGIFSLPSCPPPFVSFNS 737
Query: 913 --ESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVK 970
T D + RL + + + + + + L ++ +LSAFYF +K
Sbjct: 738 LVPCTSDFGELTDRLAVHRLVQVSSEAHAHFANYDFFKGLNTLNKYIAMDLSAFYFETLK 797
Query: 971 DRLYC-DSINGEA--RLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
DR+Y D+ +G+ R+ GL IF+ LL+ +AP+ P L EEV+ H+P+
Sbjct: 798 DRVYTGDTADGQTLQRVLGL-----IFYELLQMLAPVCPLLVEEVWDHVPA 843
Score = 301 bits (770), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 254/425 (59%), Gaps = 28/425 (6%)
Query: 6 ELYSWQR--EALNGKP--EFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
ELY+WQR + + G F LHDGPPYANG HIGHA+NKI KD+ R + QGK+V Y
Sbjct: 42 ELYAWQRSPDRIEGPAITSFTLHDGPPYANGPLHIGHALNKITKDVICRFEVGQGKKVSY 101
Query: 62 VPGWDCHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWE 118
+PGWDCHGLPIE+KA+ ++ K + D +R+ A+ A +TI QK+ F W V+ +WE
Sbjct: 102 IPGWDCHGLPIEIKALQAQKKDAAQTDAVSVREAARELAAKTIEEQKSGFREWAVMGEWE 161
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
N Y T ++ + QL F ++++ +YR KPVYWSPSSRTALAE+ELEY S +
Sbjct: 162 -NAYQTMERGFELRQLEVFKVMFEKGLVYRQFKPVYWSPSSRTALAEAELEYDEGFKSLA 220
Query: 179 IYLK--IKLNQ-VPAHLLEGATD-LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN 234
+++ +KL++ + A +L+ D + +IWTTTPW+LPAN+ IA + ++Y + G N
Sbjct: 221 AFVRYPVKLSEALKAGVLKNVEDEVSVVIWTTTPWTLPANKAIAVHRDMQYCIVKDAGNN 280
Query: 235 ---VIVAKCLVESLKWTFQTDIE-VVCDFPGQYLQD-ITYIHPINKEQRDLKLLPAGFVS 289
+++A + + + +E V+ + G L + + Y +P K ++ A FV+
Sbjct: 281 NELILIATSRIPEYEKILEHKLEIVISELRGSDLANQVQYENPFQKASGLQPIIHADFVT 340
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG----LEGL---NIL 342
S GTGLVH AP HG DD+ + IP + + G ++ DA P LEGL +I
Sbjct: 341 DSSGTGLVHLAPGHGMDDYNVCTPLGIPAFAPVDDAGAFTKDAFPEQPDLLEGLPVTDIK 400
Query: 343 GDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCK 400
G + V + ++ L +NY+H YP DWRTK+PVI +A++QWF + E IK ++ K
Sbjct: 401 KSGSNAVCNYLQKLGLLRAKQNYRHKYPIDWRTKEPVITRATEQWFANVEGIKDASM--K 458
Query: 401 TVGNI 405
+ N+
Sbjct: 459 AIANV 463
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 91/161 (56%), Gaps = 13/161 (8%)
Query: 1109 ITNQGKYSPDAGPG----LEGL---NILGEGKDQVLHLVEPDVLW--TENYQHSYPYDWR 1159
+ + G ++ DA P LEGL +I G + V + ++ L +NY+H YP DWR
Sbjct: 373 VDDAGAFTKDAFPEQPDLLEGLPVTDIKKSGSNAVCNYLQKLGLLRAKQNYRHKYPIDWR 432
Query: 1160 TKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVW 1219
TK+PVI +A++QWF + E IK ++ + V F PES + L I R WCISRQR W
Sbjct: 433 TKEPVITRATEQWFANVEGIKDASMKAIANVAFKPESGRSRLESFIQGRSQWCISRQRAW 492
Query: 1220 GVPIPVFY--DGDTI--IVNEANIKHFCTLIDEHGPDFWWS 1256
GVPIP Y +GD + ++ I+H +I E G + WW+
Sbjct: 493 GVPIPALYKVEGDRLEAAMDSKVIEHVIQVIKERGINAWWT 533
>gi|421187377|ref|ZP_15644737.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB419]
gi|421193756|ref|ZP_15651002.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB553]
gi|399969176|gb|EJO03599.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB419]
gi|399971915|gb|EJO06154.1| isoleucyl-tRNA synthetase [Oenococcus oeni AWRIB553]
Length = 921
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 328/620 (52%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S++ ++ L D + ++WTTTP+++ A++ I
Sbjct: 191 SALAEAEVEYH-DLESTSLFYANRVKDGKGVL---DNDTYLVVWTTTPFTITASRGITVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +Y + KG +VAK L+E F + +V+ + G L IT HP +K
Sbjct: 247 PNFDYVLVKPKGQTRKYVVAKALLEENAARFGWGEPEVLATYKGIDLDKITVEHPWDKNI 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L ++ A V+ GTGLVH AP G+DD+ + + +P+ + ++G AG E
Sbjct: 307 TEL-VMNADHVTLDSGTGLVHTAPGFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G D V+ ++ LW TE +HSYP+DWRTKKP+I +A QWF+ E + E
Sbjct: 366 G-KFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKE 424
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKH 711
L +++V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E I H
Sbjct: 425 ILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEKLIDH 484
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +HG +W+ + ++LL N N TK DI+D+WFDSG SWS V++++
Sbjct: 485 VADLFAKHGSTYWFEHTAKELLPDGYTNDHSPNGKFTKEEDIMDVWFDSGSSWSGVMQER 544
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA VY+EG DQ GWF S+++TSVA+ AP+++V GFV D+KG KMSKS+GN
Sbjct: 545 SYLDYPADVYLEGADQFRGWFNSNIITSVAVNGIAPYKSVIAQGFVFDDKGQKMSKSLGN 604
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTV 880
+IS +D+ G +++R WV + +S+D V
Sbjct: 605 IISPNDVAN-----------------------------QMGAEIVRLWVMSIDSSQD--V 633
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ K+IL + +KIR+++R+LL + S++ + +D +M +F
Sbjct: 634 HVSKDILKQVSESYRKIRNTMRFLLANTEDFDPKKNSVAFSDRKPIDKWMTADFNQFIKD 693
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
G + + + L+NFV N+LSAFY + KD +Y D + R S + I
Sbjct: 694 WHEKMGRYDFYDLFKQLINFVSNDLSAFYLDVAKDIVYIDEADSSERRSMQTVFYEISVK 753
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L + + P +PH AEE++ +L
Sbjct: 754 LTKLLTPFLPHTAEELWENL 773
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 221/398 (55%), Gaps = 14/398 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY + + K F LHDGPPYANG HIGHA+NKI KDI +R + G YVPGWD
Sbjct: 36 LYEKRLDLNKNKAHFNLHDGPPYANGNIHIGHAMNKISKDIIVRYKNMTGYNAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L K +S D R+ A ++AL+ + QK +F+ GVL +W+ N Y T
Sbjct: 96 THGLPIEQQLTKAGYDRKSMSKADWRRLAHDYALKQVEMQKRDFKRLGVLGEWD-NPYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+ E+ Q+ F + + YIYR LKPVYWS SS +ALAE+E+EY D S S++ +
Sbjct: 155 LNPEFEAAQVRVFGAMAGKGYIYRGLKPVYWSWSSESALAEAEVEYH-DLESTSLFYANR 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA--NVIVAKCLV 242
+ L D + ++WTTTP+++ A++ I P +Y + KG +VAK L+
Sbjct: 214 VKDGKGVL---DNDTYLVVWTTTPFTITASRGITVGPNFDYVLVKPKGQTRKYVVAKALL 270
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E F + EV+ + G L IT HP +K +L ++ A V+ GTGLVH AP
Sbjct: 271 EENAARFGWGEPEVLATYKGIDLDKITVEHPWDKNITEL-VMNADHVTLDSGTGLVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW-- 359
G+DD+ + + +P+ + ++G AG EG D V+ ++ LW
Sbjct: 330 GFGEDDYNVGMKYGLPIDMTVDSKGYLMKSAGSDFEG-KFYDDVVPLVIEKLKKAGLWLA 388
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
TE +HSYP+DWRTKKP+I +A QWF+ E + E L
Sbjct: 389 TEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEPFRKEIL 426
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 1125 GLNILGEGKDQVLHLVEPDV----LW--TENYQHSYPYDWRTKKPVILKASQQWFIDTER 1178
G + G+ D V+ LV + LW TE +HSYP+DWRTKKP+I +A QWF+ E
Sbjct: 361 GSDFEGKFYDDVVPLVIEKLKKAGLWLATEKIKHSYPFDWRTKKPIIWRAVPQWFVSIEP 420
Query: 1179 IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 1237
+ E L ++ V F P+ + L + I R W ISRQRVWGVP+P+FY D T IV+E
Sbjct: 421 FRKEILDQIKDVKFYPDWGEVRLYNMIKDRGDWVISRQRVWGVPLPIFYAEDGTPIVDEK 480
Query: 1238 NIKHFCTLIDEHGPDFWWSLPVEQLL 1263
I H L +HG +W+ ++LL
Sbjct: 481 LIDHVADLFAKHGSTYWFEHTAKELL 506
>gi|257899128|ref|ZP_05678781.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
gi|257837040|gb|EEV62114.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
Length = 930
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 337/643 (52%), Gaps = 68/643 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 189 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 244
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 245 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWENVTVLKEFAGQEMEYMTASHPFY- 299
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 300 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 357
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 358 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 416
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 417 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 475
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 476 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 535
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 536 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 595
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 596 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 625
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL +
Sbjct: 626 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVI 685
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 686 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 745
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
L + + PI+PH AEE++S L + + F Y +++
Sbjct: 746 AVALTKLLTPIIPHTAEEIWSFLKEEEA-YVQLSEFPGYEEFA 787
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 238/398 (59%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 32 NQIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 91
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+ +F+ GV DWEH Y
Sbjct: 92 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQREDFKRLGVAGDWEH-PY 150
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 151 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 209
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 210 FNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 266
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP
Sbjct: 267 ETVQTEIGWENVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAP 324
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 325 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 382
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 383 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 420
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 345 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 402
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 403 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 462
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 463 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 500
>gi|418576427|ref|ZP_13140573.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325489|gb|EHY92621.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 916
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 220/627 (35%), Positives = 336/627 (53%), Gaps = 72/627 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQF 473
++LAE+E+EY+ D S SIY V +++G D +IWTTTPW+LP+N
Sbjct: 191 SSLAEAEIEYQ-DKRSPSIY-------VAFDVIDGKGIVDDDAQFIIWTTTPWTLPSNVA 242
Query: 474 IAFNPALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHP 529
I +P L Y +V G I+ K L E L W T +++ +F G+ L+ I HP
Sbjct: 243 ITVHPDLTYGQYNVNGKKYIIGKDLASDVAEALDWDEDT-LELEKEFKGKDLEYIKAQHP 301
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
R+ ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ +A
Sbjct: 302 FF--DRESLVINGLHVTTDAGTGCVHTAPGHGEDDYIVGQKYNLPVISPVDDKGVFTDEA 359
Query: 590 GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G EG+ ++ L++ D +L E HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 360 GQ-FEGM-FYDKANKEITDLLKEDGSLLKLEFITHSYPHDWRTKKPVIFRATPQWFASID 417
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVN 705
+++ + L+ +++ F + K + + I R W ISRQRVWGVP+PVFY +GD I+ +
Sbjct: 418 KVREDILSAIDDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTS 477
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWS 760
E + H L + +G + W+ + LL + N TK DI+D+WFDSG S
Sbjct: 478 ET-VNHVADLFEANGSNIWFEREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHR 536
Query: 761 HVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
VL+ +P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KM
Sbjct: 537 GVLEVRPELSYPADLYLEGSDQYRGWFNSSITTSVATRGQSPYKMLLSHGFVMDGEGKKM 596
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNVI I + G D+ R WV++
Sbjct: 597 SKSLGNVIVPDQIVKQK-----------------------------GADIARLWVSS-VD 626
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLC 931
V I IL S D +KIR++LR++LG + +++ +T +I+ VD Y+L RL
Sbjct: 627 YLADVRISDEILKQSSDVYRKIRNTLRFMLGNVSDYNPATDAIAEKDLLEVDKYILNRLR 686
Query: 932 EFQ-NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
EF NT+D Y + Y + + NF+ ELS FY KD LY + + R S L
Sbjct: 687 EFTANTLDH-YDNYDYLDIYQEVQNFINVELSNFYLDYGKDILYIEERDSHKRRSMQTVL 745
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ I + + +API+ H AEEV+SH+P
Sbjct: 746 YQIVVDMTKLLAPILVHTAEEVWSHIP 772
Score = 276 bits (706), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 232/394 (58%), Gaps = 28/394 (7%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G P FILHDGPPYANG H+GHA+NKILKDI R ++G YVPGWD HGLPIE +A
Sbjct: 46 GNPSFILHDGPPYANGNLHMGHALNKILKDIITRYKSMRGYYAPYVPGWDTHGLPIE-QA 104
Query: 77 ITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+T K K LS + RKK + FALE I+ QK +F+ GV D+ +N Y T EY Q
Sbjct: 105 LTKKGVKRKELSIAEFRKKCEAFALEQIDNQKKDFKRLGVKGDF-NNPYITLKPEYEAAQ 163
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
+ F + + IY+ KPVYWSPSS ++LAE+E+EY+ D S SIY V ++
Sbjct: 164 IRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYQ-DKRSPSIY-------VAFDVI 215
Query: 194 EGA----TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+G D +IWTTTPW+LP+N I +P L Y +V G I+ K L E+L
Sbjct: 216 DGKGIVDDDAQFIIWTTTPWTLPSNVAITVHPDLTYGQYNVNGKKYIIGKDLASDVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W T +E+ +F G+ L+ I HP R+ ++ V++ GTG VH AP HG+
Sbjct: 276 DWDEDT-LELEKEFKGKDLEYIKAQHPFF--DRESLVINGLHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD+++ +PV++ + ++G ++ +AG EG+ ++ L++ D +L E
Sbjct: 333 DDYIVGQKYNLPVISPVDDKGVFTDEAGQ-FEGM-FYDKANKEITDLLKEDGSLLKLEFI 390
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF ++++ + L
Sbjct: 391 THSYPHDWRTKKPVIFRATPQWFASIDKVREDIL 424
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +AG EG+ + ++ L++ D +L E HSYP+DWRTKKPVI
Sbjct: 349 VDDKGVFTDEAGQ-FEGM-FYDKANKEITDLLKEDGSLLKLEFITHSYPHDWRTKKPVIF 406
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++++ + L+ ++ F + K + + I R W ISRQRVWGVP+PVF
Sbjct: 407 RATPQWFASIDKVREDILSAIDDTQFKVDWGKTRIYNMIRDRGEWVISRQRVWGVPLPVF 466
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +GD I+ +E + H L + +G + W+ + LL
Sbjct: 467 YAENGDIIMTSET-VNHVADLFEANGSNIWFEREAKDLL 504
>gi|358011280|ref|ZP_09143090.1| isoleucyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 947
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 223/673 (33%), Positives = 349/673 (51%), Gaps = 78/673 (11%)
Query: 389 TERIKPEALVCKTVGNILGRVGITHDRPG-----------TALAESELEYKPDHISKSI- 436
T K EA + + +G I + G H PG +ALAE+E++Y+ D S +I
Sbjct: 165 TMNFKQEADIVRALGEI-AKAG--HIEPGLKPVNWCLDCGSALAEAEVDYQ-DKKSDAID 220
Query: 437 --YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA- 490
+ + L + A + + TD+ +IWTTTPW+LPANQ +A + +EY + ++
Sbjct: 221 VGFGVVDLADLSAKVGVTVSNPTDV--VIWTTTPWTLPANQAVALHAEIEYQLVEIQSDR 278
Query: 491 ---NVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 546
N+I+AK LV + ++ + V+ DF G L+++ HP+ + R + ++ V
Sbjct: 279 GTHNLILAKDLVSSACERYKLENPKVLADFVGAKLENLQLQHPLITD-RQVPVILGEHVI 337
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 606
++ GTG VH AP HG DD+ + L + V N + G Y P A P G +I +
Sbjct: 338 ATSGTGAVHTAPGHGVDDYKVGLQYNLTVDNPVGGNGVYLPTA-PIFAGEHIYKANPQII 396
Query: 607 LHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLE-EVNF 662
L LW HSYP+ WR K P+I +A+ QWFI D + ++ +AL +E +++F
Sbjct: 397 EALCTAGKLWAHVAITHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQDALNAIENDIDF 456
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN---IKHFCTLIDEH 719
VP+ K ++ I RP WCISRQR WGVPIP F DT ++ I+ LI++
Sbjct: 457 VPDWGKNRIQSMIDGRPDWCISRQRTWGVPIPFFVHKDTHELHPRTPELIEEVAKLIEQE 516
Query: 720 GPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEG 774
G D W++ + + N + D LD+WFDSG + VL+++ PA +Y+EG
Sbjct: 517 GIDGWYNRDASEFIGADAEQYNAVR--DTLDVWFDSGTTHYAVLREREDLTDPADLYLEG 574
Query: 775 MDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKK 834
DQ GWF SSLLTSVA+ AP++ + HGFVVDEKG KMSKS+GN+I+ DI +
Sbjct: 575 SDQHRGWFQSSLLTSVAINKRAPYKGLLTHGFVVDEKGRKMSKSIGNIITPQDIIKD--- 631
Query: 835 LPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDV 894
G D LR+W+A+ A + GK I + + D
Sbjct: 632 --------------------------MGADGLRFWIAS-ADYRYEMTAGKEIFSRASDGY 664
Query: 895 QKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARAS 950
++IR++LR+LL L+ ST ++ +D Y+L+R + Q T+ Y + + +
Sbjct: 665 RRIRNTLRFLLANLNGFKPSTDALPVDQLIAIDQYILQRAADVQKTIQQAYEDMNFHIVT 724
Query: 951 RVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAE 1010
L NF +N+L FY ++KDR Y + +AR S L+++ +R +API+ A+
Sbjct: 725 NALTNFCINDLGGFYLDIIKDRQYTTKADSKARHSAQTALYHLVQAFVRWMAPILSFTAQ 784
Query: 1011 EVYSHLPSRQGTF 1023
E + +P + +
Sbjct: 785 EAWPLIPEQSEKY 797
Score = 236 bits (602), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 224/408 (54%), Gaps = 23/408 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R + GK +++LHDGPPYANG H+GHAVNK+LKDI ++S ++ G YVPGWD
Sbjct: 46 IYQQIRASRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIIKSRVMDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A I QK +F GV DW+ N Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYANTQIELQKKDFVRMGVFGDWD-NPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E++Y+ D S +I +
Sbjct: 165 TMNFKQEADIVRALGEIAKAGHIEPGLKPVNWCLDCGSALAEAEVDYQ-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA---- 233
+ L + A + + TD+ +IWTTTPW+LPANQ +A + +EY + ++
Sbjct: 224 GVVDLADLSAKVGVTVSNPTDV--VIWTTTPWTLPANQAVALHAEIEYQLVEIQSDRGTH 281
Query: 234 NVIVAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N+I+AK LV S ++ + +V+ DF G L+++ HP+ + R + ++ V ++
Sbjct: 282 NLILAKDLVSSACERYKLENPKVLADFVGAKLENLQLQHPLITD-RQVPVILGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P A P G +I + L
Sbjct: 341 GTGAVHTAPGHGVDDYKVGLQYNLTVDNPVGGNGVYLPTA-PIFAGEHIYKANPQIIEAL 399
Query: 353 VEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
LW HSYP+ WR K P+I +A+ QWFI D + ++ +AL
Sbjct: 400 CTAGKLWAHVAITHSYPHCWRHKTPIIFRATPQWFISMDAKGLRQDAL 447
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTA-PIFAGEHIYKANPQIIEALCTAGKLWAHVAITHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ +AL +E ++FVP+ K ++ I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAKGLRQDALNAIENDIDFVPDWGKNRIQSMIDGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT ++ I+ LI++ G D W++ + + N +
Sbjct: 487 IPFFVHKDTHELHPRTPELIEEVAKLIEQEGIDGWYNRDASEFIGADAEQYNAVR 541
>gi|421074252|ref|ZP_15535292.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392527758|gb|EIW50844.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 928
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/623 (33%), Positives = 328/623 (52%), Gaps = 54/623 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG--ATDLHALIWTTTPWSLPANQFIA 475
TALAE+E+EY + S +IY+K L L G A +++ +IWTTTPW++PAN IA
Sbjct: 191 TALAEAEIEY-AEKKSHTIYVKFPLVDDKGTLPVGINAENVYGVIWTTTPWTMPANVAIA 249
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQ 534
+P LEY+ +G ++A L++ + + + ++ G L+ + + HP +
Sbjct: 250 VHPELEYAWVESQGEIYLLAVELIDAVAKDNKLESYTILSTLKGADLEGVVFSHPFI--E 307
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R+ ++ A +V+ +GTG VH AP HG DDF + +PV+N + + G+++ + G E
Sbjct: 308 RESIIVLADYVTLEQGTGCVHTAPGHGPDDFETGIRHGLPVINPVDHAGRFTAEGGI-FE 366
Query: 595 GLNILGDGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ I + L D+L + +H Y + WR K PVI +A++QWF + + +A
Sbjct: 367 GMLIHDADVPVIKELAARDMLLGKGKIKHQYAHCWRCKNPVIYRATEQWFASVDGFREQA 426
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +++V ++P + + + +A R WCISRQRVWGVPIP+FY + ++N+ I
Sbjct: 427 LQAIKDVKWIPGWGEDRIHNMVADRHDWCISRQRVWGVPIPIFYCTQCNEHVINDITITA 486
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV-----TKSNDILDIWFDSGISWSHVLKDK 766
L + G D WW+ ++L S+ K DI+D+WFDSG S + VL+
Sbjct: 487 VKNLFRQEGSDAWWAKDSSEILPEGFTCSHCGHDTFRKETDIMDVWFDSGSSHAAVLEQH 546
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLTSVA K AP++ V HGFVVD G KMSKSVGN
Sbjct: 547 DELAWPADLYLEGSDQHRGWFQSSLLTSVATKGIAPYKAVLTHGFVVDGDGRKMSKSVGN 606
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI D+ + YG D+LR WVA+ A V
Sbjct: 607 VIFPQDV-----------------------------IKKYGADILRLWVAS-ADYQADVR 636
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTM 937
+ +IL + +KIR++ RY+LG +H+ + T + +D + L RL + + +
Sbjct: 637 VSNDILKQLSEVYRKIRNTFRYILGSIHDFNPDTDKVGYNELLEIDRWALLRLEQVREKV 696
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+++ + NF +LS+ Y ++KDR+Y R + ++ I + L
Sbjct: 697 TKAYEEYEFHLIYHTVHNFCTVDLSSIYLDILKDRVYTALPASRERRAAQTVMYEIVNTL 756
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+R ++P++ AEEV+ H+ Q
Sbjct: 757 VRLISPVLTFTAEEVWQHMKQEQ 779
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/387 (38%), Positives = 230/387 (59%), Gaps = 12/387 (3%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE---L 74
KP+FILHDGPPYANG HIGHA+NKILKD+ L+ L+G YVPGWD HGLPIE +
Sbjct: 46 KPKFILHDGPPYANGDIHIGHALNKILKDMILKYKSLRGFNTPYVPGWDTHGLPIEHAAI 105
Query: 75 KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQL 134
K + L PLD+R++ K++AL+ ++TQ+ +F+ G+ ADW+ N Y T Y Q+
Sbjct: 106 KILGLNRHELKPLDLRRECKDYALKFVDTQRQDFKRLGIGADWD-NPYVTLRPAYEAKQI 164
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
F + K+ +IY+ LK VYW S TALAE+E+EY + S +IY+K L L
Sbjct: 165 EVFGEMAKKGHIYKGLKSVYWCTSCETALAEAEIEY-AEKKSHTIYVKFPLVDDKGTLPV 223
Query: 195 G--ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD 252
G A +++ +IWTTTPW++PAN IA +P LEY+ +G ++A L++++ + +
Sbjct: 224 GINAENVYGVIWTTTPWTMPANVAIAVHPELEYAWVESQGEIYLLAVELIDAVAKDNKLE 283
Query: 253 -IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 311
++ G L+ + + HP +R+ ++ A +V+ +GTG VH AP HG DDF
Sbjct: 284 SYTILSTLKGADLEGVVFSHPFI--ERESIIVLADYVTLEQGTGCVHTAPGHGPDDFETG 341
Query: 312 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE-NYQHSYPYD 370
+ +PV+N + + G+++ + G EG+ I + L D+L + +H Y +
Sbjct: 342 IRHGLPVINPVDHAGRFTAEGGI-FEGMLIHDADVPVIKELAARDMLLGKGKIKHQYAHC 400
Query: 371 WRTKKPVILKASQQWFIDTERIKPEAL 397
WR K PVI +A++QWF + + +AL
Sbjct: 401 WRCKNPVIYRATEQWFASVDGFREQAL 427
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPV 1164
+N + + G+++ + G EG+ I + L D+L + +H Y + WR K PV
Sbjct: 349 INPVDHAGRFTAEGGI-FEGMLIHDADVPVIKELAARDMLLGKGKIKHQYAHCWRCKNPV 407
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A++QWF + + +AL ++ V ++P + + + +A R WCISRQRVWGVPIP
Sbjct: 408 IYRATEQWFASVDGFREQALQAIKDVKWIPGWGEDRIHNMVADRHDWCISRQRVWGVPIP 467
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY + ++N+ I L + G D WW+ ++L
Sbjct: 468 IFYCTQCNEHVINDITITAVKNLFRQEGSDAWWAKDSSEIL 508
>gi|424768619|ref|ZP_18195883.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
gi|402348510|gb|EJU83496.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
Length = 920
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 194 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 247
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 248 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 305
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 306 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 364
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 365 -FEGIFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 423
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 424 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 483
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 484 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 543
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 544 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 603
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 604 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 633
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 634 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 693
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 694 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 753
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 754 DMTKLLAPILVHTAEEVWSHTP 775
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 45 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 104
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 105 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 162
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 163 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 220
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 221 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 276
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 277 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 333
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 334 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGIFYDKANKAVTDLLTEKGALLKLDF 392
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 393 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 427
Score = 109 bits (273), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 352 IDDKGVFTEEGGQ-FEGIFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 410
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 411 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 470
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 471 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 507
>gi|395242915|ref|ZP_10419903.1| Isoleucyl-tRNA synthetase [Lactobacillus hominis CRBIP 24.179]
gi|394484735|emb|CCI80911.1| Isoleucyl-tRNA synthetase [Lactobacillus hominis CRBIP 24.179]
Length = 934
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 210/624 (33%), Positives = 324/624 (51%), Gaps = 63/624 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY D S IY+ + L +D+ +IWTTTPW++P+N I N
Sbjct: 191 STLAEAEVEYH-DIKSPRIYVAFPIKDGKGIL---DSDVSLVIWTTTPWTIPSNVGITVN 246
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI--- 530
P +YSV V G ++ + E+L W D V+ G +TY HP+
Sbjct: 247 PKFDYSVVEVNGKKYVIGSDRLPAVAEDLGWN---DYKVLKTLKGTDFDHMTYRHPLYDK 303
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA- 589
N ++ +V+ GTGLVH A G+DD+ + IPV + QG+++ +
Sbjct: 304 NGLGEYGLVMNDTYVTDDDGTGLVHNATGFGEDDYNVGRRYGIPVFGPMDAQGRFTKEVP 363
Query: 590 GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
P L G+ D V +E +L + + HSYP+DWRTKKPVI +A+ QWF +
Sbjct: 364 DPDLVGM-FYDDANKVVAEKLEKAGALLKLDFFTHSYPHDWRTKKPVIYRATTQWFASID 422
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNE 706
+ + + L +E+ +F+P K L + I R W ISRQR WGVP+P+FY + DT IV
Sbjct: 423 KFRDQILDQIEKADFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVTP 482
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
I+H + ++ G + W++ S E+LL + N K DILD+WFDSG SW+
Sbjct: 483 ETIEHVAEIFEKEGSNAWYTHSAEELLPEGFTSEHSPNGKFRKETDILDVWFDSGSSWAG 542
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
V+K + PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMS
Sbjct: 543 VMKQRDGLNFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMS 602
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GNVI S +D+ + G +++R WVA+ A
Sbjct: 603 KSLGNVI-----------------------SPNDV------IKQMGAEIIRLWVAS-ADT 632
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
V + + IL S + +KIR++ R++L + +I+ VD +M +L
Sbjct: 633 TSDVAVSQEILRQSAEAYRKIRNTFRFMLANTSDFDPKADTIAYPDMAGVDQFMEVKLNR 692
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ Y ++ + + + +F+ N+LSAFY KD LY D+ + E+R S +++
Sbjct: 693 LVQEVLDAYNKYDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDTQDSESRRSMQTVIYD 752
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHL 1016
+ L + + PI+PH EE++S L
Sbjct: 753 VLVKLAKVLTPILPHTMEEIWSFL 776
Score = 239 bits (611), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 216/400 (54%), Gaps = 22/400 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR LN GKP F LHDGPP+ANG H+GH++NKI KDI +R + G YVPGWD HG
Sbjct: 39 QRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LP+E L K + R+ + FA E + Q A+F+ GV+ADW+H Y T
Sbjct: 99 LPVEQQLAKKGVDRKTMDRAKYRELCRQFAQEQVQKQMADFKRLGVMADWDH-PYITLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ ++ F ++K+ YIY+ KPVYWS SS + LAE+E+EY D S IY+ +
Sbjct: 158 EFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYH-DIKSPRIYVAFPIKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK----CLVE 243
L +D+ +IWTTTPW++P+N I NP +YSV V G ++ + E
Sbjct: 217 GKGIL---DSDVSLVIWTTTPWTIPSNVGITVNPKFDYSVVEVNGKKYVIGSDRLPAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPI---NKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L W D +V+ G +TY HP+ N ++ +V+ GTGLVH A
Sbjct: 274 DLGW---NDYKVLKTLKGTDFDHMTYRHPLYDKNGLGEYGLVMNDTYVTDDDGTGLVHNA 330
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDA-GPGLEGLNILGDGKDQVLHLVEP--DV 357
G+DD+ + IPV + QG+++ + P L G+ D V +E +
Sbjct: 331 TGFGEDDYNVGRRYGIPVFGPMDAQGRFTKEVPDPDLVGM-FYDDANKVVAEKLEKAGAL 389
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + + HSYP+DWRTKKPVI +A+ QWF ++ + + L
Sbjct: 390 LKLDFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQIL 429
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + L +E +F+P K L + I R
Sbjct: 395 FTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILDQIEKADFIPSWGKTRLYNMIKDRG 454
Query: 1210 YWCISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY + DT IV I+H + ++ G + W++ E+LL
Sbjct: 455 DWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAEIFEKEGSNAWYTHSAEELL 509
>gi|408356931|ref|YP_006845462.1| isoleucyl-tRNA synthetase [Amphibacillus xylanus NBRC 15112]
gi|407727702|dbj|BAM47700.1| isoleucyl-tRNA synthetase [Amphibacillus xylanus NBRC 15112]
Length = 916
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 217/619 (35%), Positives = 325/619 (52%), Gaps = 54/619 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ D S SIY+ + LL G D +IWTTTPW+LPAN IA +
Sbjct: 191 SALAEAEIEYQ-DKRSPSIYVAFDVKD-GGELLSG--DEKFVIWTTTPWTLPANLAIALH 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P L+Y V +V I+ + L+E + + D + F G + HP RD
Sbjct: 247 PNLDYVVVNVNDKKYIIGEELLEKVATKLEWADYTITKKFKGIEADRLVAKHPFY--DRD 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V++ GTGLVH AP HG+DDF++ + VL + +G ++ D PG EG+
Sbjct: 305 SLIIVGDHVTTEDGTGLVHTAPGHGEDDFIVGQKYDLDVLCPVDYKGVFT-DEAPGFEGV 363
Query: 597 NILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
K L E L + ++ HSYP+DWRTK+PVI +A+ QWF + + E L
Sbjct: 364 FYDKANKMVTDLLEEKGALLSLDFITHSYPHDWRTKQPVIYRATPQWFASIKDFREEILE 423
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCT 714
+ V ++P+ + L + + R W ISRQRVWGVPIPVFY D T I+ + I H
Sbjct: 424 EIGNVEWLPKWGETRLYNMVRDRGDWVISRQRVWGVPIPVFYAEDQTPIITDETIAHVVK 483
Query: 715 LIDEHGPDFWWSLSVEQLLN---TSDVNSN--VTKSNDILDIWFDSGISWSHVLKD---- 765
L EHG + W+ + LL TS+ + N TK DI+D+WFDSG S VL+D
Sbjct: 484 LFREHGSNIWFEWDTKDLLPEGFTSEHSPNGIFTKETDIMDVWFDSGSSHQGVLEDHPEL 543
Query: 766 -KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVIS 824
+PA +Y+EG DQ GWF SS+ T+VA+ AP++ V HGF +D +G KMSKS+GNVI
Sbjct: 544 RRPADLYLEGSDQYRGWFNSSISTAVAVTGKAPYKAVLSHGFTLDGQGRKMSKSIGNVI- 602
Query: 825 AHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGK 884
+P AK + YG D+LR WVA+ V +
Sbjct: 603 ----------VP------------------AKIMKQYGADILRLWVAS-VDYQADVRVSD 633
Query: 885 NILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTMDTL 940
+I+ + + +KIR++ R+LLG L + + +D YML +L + + +
Sbjct: 634 DIIRQTTEGYRKIRNTFRFLLGNLADFDPEVNKVEDQHLDELDRYMLVKLQQLISRVLNA 693
Query: 941 YGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRT 1000
Y + ++ ++ F ELS+FY KD LY + N + R + + +++
Sbjct: 694 YDNYDFSTVFNLIHQFCSQELSSFYLDYAKDILYIEQENSQRRRAIQTVYYENIVTIVKL 753
Query: 1001 VAPIMPHLAEEVYSHLPSR 1019
+ PI+ H AEEV+S++P++
Sbjct: 754 ITPILTHTAEEVWSYIPNQ 772
Score = 285 bits (728), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 231/403 (57%), Gaps = 14/403 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY +E G+P F+LHDGPPYANG H+GHA+NK+LKD ++ + G YVPGWD
Sbjct: 36 LYQQVQERTKGRPLFVLHDGPPYANGDIHMGHALNKVLKDFIVKYKSMAGYHAPYVPGWD 95
Query: 67 CHGLPIELKAITSK--DKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE K K ++ + R+ +ALE I+ Q+A+F+ GV DW+ N Y T
Sbjct: 96 THGLPIETALAKKKVDRKKMTTAEFRRLCAEYALEQIDNQRAQFKQLGVRGDWD-NPYIT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
+KEY Q+ F + K+ YIY+ LKPVYWSPSS +ALAE+E+EY+ D S SIY+
Sbjct: 155 LNKEYEAAQIEVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEIEYQ-DKRSPSIYVAFD 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVES 244
+ LL G D +IWTTTPW+LPAN IA +P L+Y V +V I+ + L+E
Sbjct: 214 VKD-GGELLSG--DEKFVIWTTTPWTLPANLAIALHPNLDYVVVNVNDKKYIIGEELLEK 270
Query: 245 LKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+ + D + F G + HP RD ++ V++ GTGLVH AP H
Sbjct: 271 VATKLEWADYTITKKFKGIEADRLVAKHPFY--DRDSLIIVGDHVTTEDGTGLVHTAPGH 328
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DDF++ + VL + +G ++ D PG EG+ K L E L + ++
Sbjct: 329 GEDDFIVGQKYDLDVLCPVDYKGVFT-DEAPGFEGVFYDKANKMVTDLLEEKGALLSLDF 387
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
HSYP+DWRTK+PVI +A+ QWF + + E L + +GN+
Sbjct: 388 ITHSYPHDWRTKQPVIYRATPQWFASIKDFREEIL--EEIGNV 428
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 1118 DAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFID 1175
D PG EG+ + V L+E +L + HSYP+DWRTK+PVI +A+ QWF
Sbjct: 355 DEAPGFEGV-FYDKANKMVTDLLEEKGALLSLDFITHSYPHDWRTKQPVIYRATPQWFAS 413
Query: 1176 TERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIV 1234
+ + E L + V ++P+ + L + + R W ISRQRVWGVPIPVFY D T I+
Sbjct: 414 IKDFREEILEEIGNVEWLPKWGETRLYNMVRDRGDWVISRQRVWGVPIPVFYAEDQTPII 473
Query: 1235 NEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ I H L EHG + W+ + LL
Sbjct: 474 TDETIAHVVKLFREHGSNIWFEWDTKDLL 502
>gi|384547435|ref|YP_005736688.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
gi|298694484|gb|ADI97706.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
Length = 917
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T S+ VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSVPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|417904169|ref|ZP_12547999.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
gi|341847992|gb|EGS89161.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
Length = 917
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T S+ VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSVPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|365987077|ref|XP_003670370.1| hypothetical protein NDAI_0E03100 [Naumovozyma dairenensis CBS 421]
gi|343769140|emb|CCD25127.1| hypothetical protein NDAI_0E03100 [Naumovozyma dairenensis CBS 421]
Length = 1013
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 233/663 (35%), Positives = 352/663 (53%), Gaps = 89/663 (13%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--------LEGATDLHALIWTTTPWSLP 469
TALAESELEY +H S S Y++ L++ L + + LIWTTTPW+L
Sbjct: 226 TALAESELEYNKEHKSTSAYVQFPLSRKSQTLFLEKLGMTVGSMNSIDCLIWTTTPWTLF 285
Query: 470 ANQFIAFNPALEYS-VASVKGAN-------VIVAKCLVENLKWTFQTDIDVVCDFPGQYL 521
+N+ I FN EYS V S K A +I+ L+ + + + D ++ F G+ L
Sbjct: 286 SNKAICFNKHFEYSLVTSSKSAENYNKPDLLIIETNLISQV-YKQKEDYTILKTFSGEIL 344
Query: 522 QDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITN 581
+++ Y +P+ + LL A V+ GTGLVH AP HG DD+LL + + + + I +
Sbjct: 345 ENLHYTNPLLSNNLEYPLLHADHVTKEAGTGLVHTAPGHGADDYLLGIQNNLIIYSPIDH 404
Query: 582 QGKYS----PD-----------AGPGLEGLNILGDGKDQVL--HLVEPDVLW-TENYQHS 623
+G+Y PD + P G ++L +++ L E ++L+ + HS
Sbjct: 405 EGRYKLSELPDNVQQLLSDNESSSPIPVGRSVLDPRTTKLILNKLDELEMLFGCKELVHS 464
Query: 624 YPYDWRTKKPVILKASQQWFIDTERIKPEALACLEE--VNFVPESAKKTLRDQIAQRPYW 681
YPYDWR+KKPVIL+A+ QWF++ ++K A+ L++ V F PE K L I R W
Sbjct: 465 YPYDWRSKKPVILRATPQWFLNLNKVKTLAMESLDKKGVEFFPERGKTRLLSFIKNRNEW 524
Query: 682 CISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSV--EQLL--N 734
CISRQRVWGVPIP FY + D +++ E I+H I+ +G D W++ SV E+ L
Sbjct: 525 CISRQRVWGVPIPAFYKISNPDELLMTEEIIEHVIKTIESNGIDRWFNESVPTEEWLPEK 584
Query: 735 TSDVNSNVTKSNDILDIWFDSGISWSHVLKD------------KPAHVY---MEGMDQIN 779
++ + + D +D+WFDSG SW V++D +P H++ +EG DQ
Sbjct: 585 YQNIANEYKRGFDTMDVWFDSGSSWK-VIEDFYKNTLKLNPAYRPKHLFDLCLEGSDQHR 643
Query: 780 GWFMSSLLTSVA--LKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPA 837
GWF S LLT++A +K AP+ V HGF +DE G KMSKS+GN IS D+ +G K+
Sbjct: 644 GWFQSLLLTNIAMTMKKVAPYSEVITHGFTLDENGIKMSKSIGNTISPKDVIEGNAKI-- 701
Query: 838 YEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKI 897
DI LP GVD LR++V A+++ + IG N++ + ++KI
Sbjct: 702 ------------DI------LP-LGVDGLRYFV-AYSNFTTDITIGPNVMKHVAEALKKI 741
Query: 898 RSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVL 953
R S +++ G L SE I R +D ++L L E LY E+ +++ +L
Sbjct: 742 RISFKFMQGNLEK-SEDFKLIPIDDLRPIDKFVLSNLNELLVNTKQLYEEYNFSKILTLL 800
Query: 954 LNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
+ + NELSA YF + KD LY DS+ + R S L +I V + PI+P L +EV
Sbjct: 801 QHHLTNELSAVYFDISKDSLYSDSMTSKKRQSIQTVLFSILQVYCNILYPILPTLVQEVR 860
Query: 1014 SHL 1016
+++
Sbjct: 861 NNI 863
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 244/414 (58%), Gaps = 38/414 (9%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT-- 78
FILHDGPPYANG H+GHAVNKILKDI +R GK + Y PGWDCHGLPIELK +
Sbjct: 83 FILHDGPPYANGDLHLGHAVNKILKDIIIRYQKSTGKYIFYKPGWDCHGLPIELKVLKNF 142
Query: 79 SKDKL--LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQ 136
SKD+L +SPL IR AK AL+TI QK +FE +G+ DW+ + Y T +K+Y NQL
Sbjct: 143 SKDELQNVSPLKIRSLAKKHALKTIKDQKRQFEQFGIFTDWD-DPYITLNKDYELNQLRI 201
Query: 137 FYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL---- 192
F+ ++K I R KPV+W ++TALAESELEY +H S S Y++ L++ L
Sbjct: 202 FHKMFKLGLIKRQNKPVFWGTETKTALAESELEYNKEHKSTSAYVQFPLSRKSQTLFLEK 261
Query: 193 ----LEGATDLHALIWTTTPWSLPANQFIAFNPALEYS-VASVKGA------NVIVAKCL 241
+ + LIWTTTPW+L +N+ I FN EYS V S K A ++++ +
Sbjct: 262 LGMTVGSMNSIDCLIWTTTPWTLFSNKAICFNKHFEYSLVTSSKSAENYNKPDLLIIETN 321
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
+ S + + D ++ F G+ L+++ Y +P+ + LL A V+ GTGLVH AP
Sbjct: 322 LISQVYKQKEDYTILKTFSGEILENLHYTNPLLSNNLEYPLLHADHVTKEAGTGLVHTAP 381
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYS----PD-----------AGPGLEGLNILGDGK 346
HG DD+LL + + + + I ++G+Y PD + P G ++L
Sbjct: 382 GHGADDYLLGIQNNLIIYSPIDHEGRYKLSELPDNVQQLLSDNESSSPIPVGRSVLDPRT 441
Query: 347 DQVL--HLVEPDVLW-TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+++ L E ++L+ + HSYPYDWR+KKPVIL+A+ QWF++ ++K A+
Sbjct: 442 TKLILNKLDELEMLFGCKELVHSYPYDWRSKKPVILRATPQWFLNLNKVKTLAM 495
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 77/119 (64%), Gaps = 7/119 (5%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLE--GVNFVPESAKKSLRDQIAQRP 1209
HSYPYDWR+KKPVIL+A+ QWF++ ++K A+ L+ GV F PE K L I R
Sbjct: 463 HSYPYDWRSKKPVILRATPQWFLNLNKVKTLAMESLDKKGVEFFPERGKTRLLSFIKNRN 522
Query: 1210 YWCISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWW--SLPVEQLL 1263
WCISRQRVWGVPIP FY + D +++ E I+H I+ +G D W+ S+P E+ L
Sbjct: 523 EWCISRQRVWGVPIPAFYKISNPDELLMTEEIIEHVIKTIESNGIDRWFNESVPTEEWL 581
>gi|422824073|ref|ZP_16872261.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK405]
gi|422825852|ref|ZP_16874031.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK678]
gi|422856013|ref|ZP_16902671.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1]
gi|422865982|ref|ZP_16912607.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1058]
gi|324993400|gb|EGC25320.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK405]
gi|324995288|gb|EGC27200.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK678]
gi|327461674|gb|EGF08005.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1]
gi|327489527|gb|EGF21320.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1058]
Length = 930
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 323/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F D+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWADVQVLATYRGQELNHIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANDLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL ++ N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHSGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R +++ + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDVLVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L + F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEEEEF 778
Score = 265 bits (678), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWADVQVLATYRGQELNHIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANDLEVFVTVNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|221140635|ref|ZP_03565128.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|384861787|ref|YP_005744507.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|302751016|gb|ADL65193.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 917
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFLNVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|440470791|gb|ELQ39842.1| isoleucyl-tRNA synthetase [Magnaporthe oryzae Y34]
Length = 975
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/617 (34%), Positives = 323/617 (52%), Gaps = 44/617 (7%)
Query: 430 DHISKSIYLKIKLN-QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK 488
+H+S + Y+K+ L + A L+ +T L +IWTTTPW+LPANQ IA + L Y ++
Sbjct: 205 NHVSLAAYVKMPLTGDLEALGLDPSTSL--VIWTTTPWTLPANQAIAVHKDLVYLAVKLR 262
Query: 489 GANVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVS 546
G +I+ + + D+ VV G+ L ++Y++ + + + ++ A FVS
Sbjct: 263 GETMIIGADALGRMSEIMAPDVPVVLTSLVGEQLLAVSYLNQLQGSKAQPQPIIHADFVS 322
Query: 547 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-------LEGLNIL 599
+ G+GLVH AP HG +D+ + + +P ++ + G ++ D P G ++L
Sbjct: 323 ADSGSGLVHLAPGHGFEDYEVCKSLGLPAVSAVDGAGIFAKDVCPANTEIPREGAGADVL 382
Query: 600 GDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEE 659
G ++ ++ DVL + ++H YPYDWRTKKP++++A+ QWF D IK AL L++
Sbjct: 383 KGGSKAIIKILGRDVLHSHKHKHKYPYDWRTKKPIVVRATAQWFADVASIKESALDALKD 442
Query: 660 VNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-----IIVNEANIKHFCT 714
V F+P + + L I R WCISRQR WGVPIP FYD D I+ E I H
Sbjct: 443 VKFIPAAGQTRLESFIKGRSEWCISRQRAWGVPIPAFYDNDIADGGEAIMTEETIDHVIK 502
Query: 715 LIDEHGPDFWWSLSVEQ--LLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKPAHVYM 772
+++ G D WWS + ++ + S N+ + D +D+WFDSG SW+ + A VY+
Sbjct: 503 TVEQRGVDAWWSDAADEPAWIPESLRGRNLRRGTDTMDVWFDSGSSWTQT--EGRADVYL 560
Query: 773 EGMDQINGWFMSSLLTSVALK------HTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAH 826
EG DQ GWF SSLLT VA + APF+N+ HGF +D G KMSKS+GNVIS
Sbjct: 561 EGTDQHRGWFQSSLLTKVATRADENSAQKAPFKNLITHGFTLDAHGKKMSKSLGNVISPM 620
Query: 827 DITQG---AKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA-SKDPTVPI 882
D+ +G A + P K + + A G D LR VA+ +KD + I
Sbjct: 621 DVIEGKLLAPRKPGRNKQRKKT-QEKNQSDPAATHEVLGPDALRLLVASSDYTKD--IVI 677
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYG 942
+ L+S ++K RS+ + LLG + + VD + L + + + Y
Sbjct: 678 SERALSSIHTSLRKFRSTFKILLGSMQQPPRQEPFDA--VDQIAMLHLKDALSQVGKHYD 735
Query: 943 EFQYARASRVLLNFVVNELSAFYFTLVKDRLYC--DSINGEARLSGLHTLHNIFHVLLRT 1000
F++ + VL ++V +LSA Y VKD+LYC D+ N A L IF R
Sbjct: 736 SFEFYKGFAVLNHWVSQQLSAIYLEAVKDKLYCGGDAANATA------ALVPIFDGFCRM 789
Query: 1001 VAPIMPHLAEEVYSHLP 1017
+AP+ P + EE + H P
Sbjct: 790 LAPMAPLVVEEAWDHAP 806
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/408 (41%), Positives = 246/408 (60%), Gaps = 22/408 (5%)
Query: 6 ELYSWQREALNGKPE---FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 62
ELY WQ +PE FILHDGPPYANG H+GHA+NKILKD+ LR + QG RV YV
Sbjct: 36 ELYKWQ---ATNRPESNPFILHDGPPYANGDLHVGHALNKILKDMILRVKVQQGHRVKYV 92
Query: 63 PGWDCHGLPIELKAITSK---DKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH 119
PGWDCHGLPIELKA+ + + ++P ++R A+ A T+ +Q F+ +GV+ADW+
Sbjct: 93 PGWDCHGLPIELKALGGRAEGQEQMTPAEVRALARELAATTVESQMRGFQEFGVMADWDQ 152
Query: 120 NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI 179
+ T YV +QL F + + IYR KPVYWS SSRTALAE+ELEY+ +HVS +
Sbjct: 153 R-WETMQPSYVADQLRLFQRMVSRGLIYRRHKPVYWSSSSRTALAEAELEYEENHVSLAA 211
Query: 180 YLKIKL-NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA 238
Y+K+ L + A L+ +T L +IWTTTPW+LPANQ IA + L Y ++G +I+
Sbjct: 212 YVKMPLTGDLEALGLDPSTSL--VIWTTTPWTLPANQAIAVHKDLVYLAVKLRGETMIIG 269
Query: 239 KCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLK-LLPAGFVSSSKGTGL 296
+ + D+ VV G+ L ++Y++ + + + ++ A FVS+ G+GL
Sbjct: 270 ADALGRMSEIMAPDVPVVLTSLVGEQLLAVSYLNQLQGSKAQPQPIIHADFVSADSGSGL 329
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-------LEGLNILGDGKDQV 349
VH AP HG +D+ + + +P ++ + G ++ D P G ++L G +
Sbjct: 330 VHLAPGHGFEDYEVCKSLGLPAVSAVDGAGIFAKDVCPANTEIPREGAGADVLKGGSKAI 389
Query: 350 LHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ ++ DVL + ++H YPYDWRTKKP++++A+ QWF D IK AL
Sbjct: 390 IKILGRDVLHSHKHKHKYPYDWRTKKPIVVRATAQWFADVASIKESAL 437
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Query: 1125 GLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 1184
G ++L G ++ ++ DVL + ++H YPYDWRTKKP++++A+ QWF D IK AL
Sbjct: 378 GADVLKGGSKAIIKILGRDVLHSHKHKHKYPYDWRTKKPIVVRATAQWFADVASIKESAL 437
Query: 1185 ACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT-----IIVNEANI 1239
L+ V F+P + + L I R WCISRQR WGVPIP FYD D I+ E I
Sbjct: 438 DALKDVKFIPAAGQTRLESFIKGRSEWCISRQRAWGVPIPAFYDNDIADGGEAIMTEETI 497
Query: 1240 KHFCTLIDEHGPDFWWS 1256
H +++ G D WWS
Sbjct: 498 DHVIKTVEQRGVDAWWS 514
>gi|222151014|ref|YP_002560167.1| isoleucyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
gi|254782419|sp|B9EB60.1|SYI_MACCJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|222120136|dbj|BAH17471.1| Ile-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
Length = 914
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 218/630 (34%), Positives = 338/630 (53%), Gaps = 78/630 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQF 473
++LAE+E+EY+ D +S SIY V +L+G D+ +IWTTTPW+LPAN
Sbjct: 191 SSLAEAEIEYQ-DKVSPSIY-------VAFDVLDGKGLVDDDVKFVIWTTTPWTLPANVA 242
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENL----KWTFQTDIDVVCDFPGQYLQDITYIHP 529
IA N L+Y V + IVA+ L++N+ W + + + F G L+ + HP
Sbjct: 243 IALNKDLDYVQVRVNDTSYIVAQALLDNVCDAVGWD-KEGVQIEKTFKGADLEFVKARHP 301
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
R+ ++ V++ GTG VH AP HG+DDF++ ++ V++ + +G Y+ +A
Sbjct: 302 FI--DRESLIILGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYELDVISPVDGKGVYTSEA 359
Query: 590 GPGLEGL------NILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWF 643
G EG+ ++ + + HL++ D ++HSYP+DWRTKKPVI +A+ QWF
Sbjct: 360 GE-FEGMYYDKANKVITEKLEASGHLLKLDF-----FKHSYPHDWRTKKPVIFRATPQWF 413
Query: 644 IDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDT 701
+++ + L +EE F E K + + I R W ISRQRVWGVP+PVFY +GD
Sbjct: 414 ASINKVRQDILNAIEETEFKVEWGKTRIYNMIRDRGDWVISRQRVWGVPLPVFYAENGD- 472
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSG 756
II+++A I+H TL+++HG + W+ LL + N TK DI+D+WFDSG
Sbjct: 473 IIMDKAVIEHVATLVEKHGTNVWYEREATDLLPEGYTHPGSPNGVFTKEKDIMDVWFDSG 532
Query: 757 ISWSHVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
S VL+ +P A +Y EG DQ GWF SS+ T+VA + +P++ + HGFV+D +
Sbjct: 533 SSHRGVLEARPELSFPADLYFEGSDQYRGWFNSSITTAVATRGKSPYKKLLSHGFVMDGQ 592
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA 871
G KMSKS+GN + LP EK V + G D++R WV
Sbjct: 593 GRKMSKSLGNTV-----------LP--EKVVKQM----------------GADIIRLWVM 623
Query: 872 AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYML 927
+ V I +IL + +KIR++ ++LLG +++ + +T ++ +D +ML
Sbjct: 624 S-VDYLADVRISDDILKQVSEVYRKIRNTFKFLLGNVNDFNPATDAVPYAELVEIDQFML 682
Query: 928 KRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGL 987
+L F N Y Y + L NF+ ELS FY KD LY ++ + R S
Sbjct: 683 NKLYTFVNNAHKHYDNNDYLFMYQELQNFINVELSNFYLDYGKDILYIEAQDSHVRRSMQ 742
Query: 988 HTLHNIFHVLLRTVAPIMPHLAEEVYSHLP 1017
++ + L + +API+PH A+E++SH P
Sbjct: 743 TVVYEVLTSLTKVLAPIIPHTADEIWSHTP 772
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 235/398 (59%), Gaps = 36/398 (9%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G+ +ILHDGPPYANG H+GHA+NKI+KD+ +R + G YVPGWD HGLPIE A
Sbjct: 46 GRTPYILHDGPPYANGQIHMGHALNKIIKDMIMRYKAMNGYYAPYVPGWDTHGLPIE-TA 104
Query: 77 ITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+T K K +S + R+ + +ALE I QKA+F+ GV DWE N Y T +++ Q
Sbjct: 105 LTKKGVDRKSMSEAEFRELCRAYALEQIELQKADFKRLGVNGDWE-NPYITLQEKFEAEQ 163
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
+ F ++ + YIY+ KPVYWSPSS ++LAE+E+EY+ D VS SIY V +L
Sbjct: 164 IRLFGDMAAKGYIYKGKKPVYWSPSSESSLAEAEIEYQ-DKVSPSIY-------VAFDVL 215
Query: 194 EGA----TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV----ESL 245
+G D+ +IWTTTPW+LPAN IA N L+Y V + IVA+ L+ +++
Sbjct: 216 DGKGLVDDDVKFVIWTTTPWTLPANVAIALNKDLDYVQVRVNDTSYIVAQALLDNVCDAV 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + +++ F G L+ + HP R+ ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KEGVQIEKTFKGADLEFVKARHPFI--DRESLIILGDHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL------NILGDGKDQVLHLVEPDVLW 359
DDF++ ++ V++ + +G Y+ +AG EG+ ++ + + HL++ D
Sbjct: 333 DDFIVGQKYELDVISPVDGKGVYTSEAGE-FEGMYYDKANKVITEKLEASGHLLKLDF-- 389
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ---FKHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 15/163 (9%)
Query: 1109 ITNQGKYSPDAGPGLEGL------NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKK 1162
+ +G Y+ +AG EG+ ++ E + HL++ D ++HSYP+DWRTKK
Sbjct: 349 VDGKGVYTSEAGE-FEGMYYDKANKVITEKLEASGHLLKLDF-----FKHSYPHDWRTKK 402
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
PVI +A+ QWF +++ + L +E F E K + + I R W ISRQRVWGVP
Sbjct: 403 PVIFRATPQWFASINKVRQDILNAIEETEFKVEWGKTRIYNMIRDRGDWVISRQRVWGVP 462
Query: 1223 IPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+PVFY +GD II+++A I+H TL+++HG + W+ LL
Sbjct: 463 LPVFYAENGD-IIMDKAVIEHVATLVEKHGTNVWYEREATDLL 504
>gi|289551024|ref|YP_003471928.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
gi|385784645|ref|YP_005760818.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis N920143]
gi|418414320|ref|ZP_12987535.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180556|gb|ADC87801.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
gi|339894901|emb|CCB54202.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis N920143]
gi|410876927|gb|EKS24824.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 916
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 323/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + E D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGVVDE---DAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L+Y +V G I+A+ L E L W + I + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGKKYIIAEALADEVAEALDWD-KNHIKLEKEFMGKELEYVEAQHPF--L 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + G
Sbjct: 304 DRVSLVINGNHVTTDAGTGCVHTAPGHGEDDYIVGQKYGLPVISPLNDKGVFTEEGGQ-F 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EG+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 363 EGMFYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKPVIFRATPQWFASINKVRQD 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +EE F K + + I R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 423 ILDAIEETEFKVNWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L +++G + W+ ++LL + N TK DI+D+WFDSG S VL++
Sbjct: 482 HVADLFEQYGSNVWFEREAKELLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLEN 541
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+G
Sbjct: 542 RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI + + G D+ R WV++ V
Sbjct: 602 NVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I IL + D +KIR++LR++LG +++ + T ++ VD Y+L RL EF +
Sbjct: 632 RISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTAS 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y F Y + + NF+ ELS FY KD LY + N R S L+ I
Sbjct: 692 TIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILVD 751
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 752 MTKLLAPILVHTAEEVWSHTP 772
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 226/389 (58%), Gaps = 18/389 (4%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G +ILHDGPPYANG H+GHA+NKI+KD +R +QG +VPGWD HGLPIE +A
Sbjct: 46 GNQTYILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLPIE-QA 104
Query: 77 ITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+T K K +S + R+K K FALE + QK +F+S GV D+ +N Y T EY Q
Sbjct: 105 LTKKGVDRKKMSIAEFREKCKEFALEQVELQKKDFKSLGVRGDF-NNPYITLKPEYEAAQ 163
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ + +
Sbjct: 164 IRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSKGVVD 222
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTF 249
E D +IWTTTPW++P+N I +P L+Y +V G I+A+ L E+L W
Sbjct: 223 E---DAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGKKYIIAEALADEVAEALDWD- 278
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
+ I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+DD++
Sbjct: 279 KNHIKLEKEFMGKELEYVEAQHPF--LDRVSLVINGNHVTTDAGTGCVHTAPGHGEDDYI 336
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYP 368
+ +PV++ + ++G ++ + G EG+ K L E D L ++ HSYP
Sbjct: 337 VGQKYGLPVISPLNDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLSFITHSYP 395
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 396 HDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + G EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E F K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEETEFKVNWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEQYGSNVWFEREAKELL 504
>gi|418637502|ref|ZP_13199821.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis VCU139]
gi|374838748|gb|EHS02283.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis VCU139]
Length = 916
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 323/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + E D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGVVDE---DAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L+Y +V G I+A+ L E L W + I + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGKKYIIAEALADEVAEALDWD-KNHIKLEKEFMGKELEYVEAQHPF--L 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + G
Sbjct: 304 DRVSLVINGNHVTTDAGTGCVHTAPGHGEDDYIVGQKYGLPVISPLNDKGVFTEEGGQ-F 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EG+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 363 EGMFYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKPVIFRATPQWFASINKVRQD 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +EE F K + + I R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 423 ILDAIEETEFKVNWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L +++G + W+ ++LL + N TK DI+D+WFDSG S VL++
Sbjct: 482 HVADLFEQYGSNVWFEREAKELLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLEN 541
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+G
Sbjct: 542 RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI + + G D+ R WV++ V
Sbjct: 602 NVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I IL + D +KIR++LR++LG +++ + T ++ VD Y+L RL EF +
Sbjct: 632 RISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTAS 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y F Y + + NF+ ELS FY KD LY + N R S L+ I
Sbjct: 692 TIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILVD 751
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 752 MTKLLAPILVHTAEEVWSHTP 772
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 226/389 (58%), Gaps = 18/389 (4%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G +ILHDGPPYANG H+GHA+NKI+KD +R +QG +VPGWD HGLPIE +A
Sbjct: 46 GNQTYILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLPIE-QA 104
Query: 77 ITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+T K K +S + R+K K FALE + QK +F+S GV D+ +N Y T EY Q
Sbjct: 105 LTKKGVDRKKMSIAEFREKCKEFALEQVELQKKDFKSLGVRGDF-NNPYITLKPEYEAAQ 163
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ + +
Sbjct: 164 IRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSKGVVD 222
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTF 249
E D +IWTTTPW++P+N I +P L+Y +V G I+A+ L E+L W
Sbjct: 223 E---DAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGKKYIIAEALADEVAEALDWD- 278
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
+ I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+DD++
Sbjct: 279 KNHIKLEKEFMGKELEYVEAQHPF--LDRVSLVINGNHVTTDAGTGCVHTAPGHGEDDYI 336
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYP 368
+ +PV++ + ++G ++ + G EG+ K L E D L ++ HSYP
Sbjct: 337 VGQKYGLPVISPLNDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLSFITHSYP 395
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 396 HDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + G EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E F K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEETEFKVNWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEQYGSNVWFEREAKELL 504
>gi|384549949|ref|YP_005739201.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302332798|gb|ADL22991.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 917
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/623 (34%), Positives = 324/623 (52%), Gaps = 64/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y ++ G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNINGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
+ L +E NF K + + + R W ISRQRVWGVP+PVFY +GD I+ E
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET- 479
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
+ H L EHG + W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 480 VNHVADLFAEHGSNIWFEREAKELLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVL 539
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ T+VA + +P++ + HGFV+D +G KMSKS
Sbjct: 540 ETRPELSFPADMYLEGSDQYRGWFNSSITTAVATRGVSPYKFLLSHGFVMDGEGKKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVI + + G D+ R WV++
Sbjct: 600 LGNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLA 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQ 934
V I IL + D +KIR++LR++LG +++ + T S+ VD Y+L RL EF
Sbjct: 630 DVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSVPESELLEVDRYLLNRLREFT 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 690 ASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 750 VDMTKLLAPILVHTAEEVWSHTP 772
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y ++ G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNINGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L EHG + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFAEHGSNIWFEREAKELL 504
>gi|385781420|ref|YP_005757591.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
11819-97]
gi|418574657|ref|ZP_13138824.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
gi|364522409|gb|AEW65159.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
11819-97]
gi|371978788|gb|EHO96029.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
Length = 917
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVGGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVGGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|257425247|ref|ZP_05601672.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257271704|gb|EEV03842.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
Length = 748
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 22 SSLAEAEIEYH-DKRSASIYVAFNVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 75
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 76 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 133
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 134 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 192
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 193 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 251
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 252 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 311
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 312 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 371
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 372 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 431
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 432 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 461
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 462 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 521
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 522 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 581
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 582 DMTKLLAPILVHTAEEVWSHTP 603
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 147/259 (56%), Gaps = 17/259 (6%)
Query: 146 IYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGATDLHA--LI 203
IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ + +G D A +I
Sbjct: 7 IYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFNVKDD-----KGVVDADAKFII 60
Query: 204 WTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTFQTDIEVVCDF 259
WTTTPW++P+N I +P L+Y +V G I+A+ L E+L W + I++ ++
Sbjct: 61 WTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEY 119
Query: 260 PGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVL 319
G+ L+ + HP R+ ++ V++ GTG VH AP HG+DD+++ ++PV+
Sbjct: 120 TGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 177
Query: 320 NLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVI 378
+ I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI
Sbjct: 178 SPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 236
Query: 379 LKASQQWFIDTERIKPEAL 397
+A+ QWF +++ + L
Sbjct: 237 FRATPQWFASISKVRQDIL 255
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 180 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 238
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 239 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 298
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 299 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 335
>gi|417891673|ref|ZP_12535730.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
gi|341850959|gb|EGS91888.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
Length = 917
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 321/621 (51%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + +D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDDKGVV---DSDAKFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L+Y +V G IVA+ L E L W + I + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVDGQKYIVAEALSDAVAEALGWD-KDSIKLEKEFSGKELEYVVAQHPF--L 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 304 DRKSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-F 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 363 EGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRKD 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +E NF K + + + R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 423 ILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 482 HVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLET 541
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y+EG DQ GWF SS+ T+VA + +P++ + HGFV+D +G KMSKS+G
Sbjct: 542 RPELSFPADMYLEGSDQYRGWFNSSITTAVATRGVSPYKFLLSHGFVMDGEGKKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI + + G D+ R WV++ V
Sbjct: 602 NVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF +
Sbjct: 632 RISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTAS 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 692 TINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVD 751
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 752 MTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 225/393 (57%), Gaps = 18/393 (4%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDDK 218
Query: 190 AHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESL 245
+ +D +IWTTTPW++P+N I +P L+Y +V G IVA+ L E+L
Sbjct: 219 GVV---DSDAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVDGQKYIVAEALSDAVAEAL 275
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
W + I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+
Sbjct: 276 GWD-KDSIKLEKEFSGKELEYVVAQHPF--LDRKSLVINGEHVTTDAGTGCVHTAPGHGE 332
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-Q 364
DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 333 DDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFIT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASISKVRKDIL 424
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRKDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFAEHGSNIWFEREAKDLL 504
>gi|315658520|ref|ZP_07911392.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
gi|315496849|gb|EFU85172.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
Length = 916
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 323/621 (52%), Gaps = 60/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + E D +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDSKGVVDE---DAQFIIWTTTPWTIPSNVAITVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P L+Y +V G I+A+ L E L W + I + +F G+ L+ + HP
Sbjct: 247 PELKYGQYNVNGKKYIIAEALADEVAEALDWD-KNHIKLEKEFMGKELEYVEAQHPF--L 303
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HG+DD+++ +PV++ + ++G ++ + G
Sbjct: 304 DRVSLVINGNHVTTDAGTGCVHTAPGHGEDDYIVGQKYGLPVISPLNDKGVFTEEGGQ-F 362
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EG+ K L E D L ++ HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 363 EGMFYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKPVIFRATPQWFASINKVRQD 422
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +EE F K + + I R W ISRQRVWGVP+PVFY +GD I+ E +
Sbjct: 423 ILDAIEETEFKVNWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VN 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L +++G + W+ ++LL + N TK DI+D+WFDSG S VL++
Sbjct: 482 HVADLFEQYGSNVWFEREAKELLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSHRGVLEN 541
Query: 766 KP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+P A +Y EG DQ GWF SS+ T+VA + AP++ + HGFV+D +G KMSKS+G
Sbjct: 542 RPELSFPADLYFEGSDQYRGWFNSSITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLG 601
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI + + G D+ R WV++ V
Sbjct: 602 NVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLADV 631
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNT 936
I IL + D +KIR++LR++LG +++ + T ++ VD Y+L RL EF +
Sbjct: 632 RISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTAS 691
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
Y F Y + + NF+ ELS FY KD LY + N R S L+ I
Sbjct: 692 TIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILVD 751
Query: 997 LLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 752 MTKLLAPILVHTAEEVWSHTP 772
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 226/389 (58%), Gaps = 18/389 (4%)
Query: 17 GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA 76
G +ILHDGPPYANG H+GHA+NKI+KD +R +QG +VPGWD HGLPIE +A
Sbjct: 46 GNQTYILHDGPPYANGNLHMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLPIE-QA 104
Query: 77 ITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQ 133
+T K K +S + R+K K FALE + QK +F+S GV D+ +N Y T EY Q
Sbjct: 105 LTKKGVDRKKMSIAEFREKCKEFALEQVELQKKDFKSLGVRGDF-NNPYITLKPEYEAAQ 163
Query: 134 LCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLL 193
+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ + +
Sbjct: 164 IRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDSKGVVD 222
Query: 194 EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VESLKWTF 249
E D +IWTTTPW++P+N I +P L+Y +V G I+A+ L E+L W
Sbjct: 223 E---DAQFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGKKYIIAEALADEVAEALDWD- 278
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
+ I++ +F G+ L+ + HP R ++ V++ GTG VH AP HG+DD++
Sbjct: 279 KNHIKLEKEFMGKELEYVEAQHPF--LDRVSLVINGNHVTTDAGTGCVHTAPGHGEDDYI 336
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYP 368
+ +PV++ + ++G ++ + G EG+ K L E D L ++ HSYP
Sbjct: 337 VGQKYGLPVISPLNDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLSFITHSYP 395
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 396 HDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G ++ + G EG+ K L E D L ++ HSYP+DWRTKKPVI +
Sbjct: 349 LNDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E F K + + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIEETEFKVNWGKTRIYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +++G + W+ ++LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEQYGSNVWFEREAKELL 504
>gi|410940136|ref|ZP_11371954.1| isoleucine--tRNA ligase [Leptospira noguchii str. 2006001870]
gi|410784766|gb|EKR73739.1| isoleucine--tRNA ligase [Leptospira noguchii str. 2006001870]
Length = 914
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 216/627 (34%), Positives = 322/627 (51%), Gaps = 63/627 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
TA AE+E+EY P HIS SIY+K + G LIWTTTPW+LPAN I F
Sbjct: 198 ATAHAEAEIEYYP-HISPSIYVKFPIV--------GEQKKFCLIWTTTPWTLPANLGICF 248
Query: 477 NPALEYSVASVK-GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
N +EYS+ + G I+A LVEN+ + V L + + HP R
Sbjct: 249 NRKIEYSIFKTESGEEFILADGLVENVTSATGVSFNKVKSISSDELSALKFQHPFI--DR 306
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L V+ GTG VH AP HGQDD+ + LA + + + + G+Y+ D P ++G
Sbjct: 307 ISIPLFGDHVTLDAGTGCVHTAPGHGQDDYKVGLAAGLEPFSPVDDYGRYT-DEFPLMQG 365
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWF--IDTERIKP 651
+ D +++ L++ +L+ ++HSYP+ WR+KKP+I +A+ QWF +D ++
Sbjct: 366 KKVF-DANPEIIQLLKDKNLLLYHSEFEHSYPHSWRSKKPLIFRATPQWFFKMDFNELRE 424
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTIIVNEAN 708
++L+ ++ V ++P +R + RP WC+SRQR WGVPIP F G T I ++ +
Sbjct: 425 KSLSAIDGVRWIPSWGITRIRSMVEARPDWCLSRQRNWGVPIPAFTCESCGQTHI-DDVS 483
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVL 763
I+ F ++ E G + W+S LL N + K NDILD+WFDSG+S VL
Sbjct: 484 IQFFTKMVREKGIEIWYSEKATDLLPQGTKCGKCGNDSFKKGNDILDVWFDSGVSSFAVL 543
Query: 764 KDK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y EG DQ GWF SSL S+AL+ P++ V HG+V+DEKG MSKS+
Sbjct: 544 GERKNEPPADLYFEGSDQHRGWFQSSLWPSMALRGIPPYKTVLTHGYVLDEKGHPMSKSL 603
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I D+ Q YG D+LR WV++ +D
Sbjct: 604 GNGIDP----------------------TADVIQ------IYGADILRLWVSSLDFRD-D 634
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYVDVYMLKRLCEFQNT 936
+ +GK L + +KIR++ RYLLG L H+ +D + L +L +F
Sbjct: 635 IKVGKESLKIVSEQYRKIRNTFRYLLGNLDGHTSEQNLPFEELEELDRFYLSKLSQFVED 694
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y +Q+ + + L+ F LS YF +++DR+YCD+ N + R S L I +
Sbjct: 695 VGVSYESYQFHQIYQKLILFCTVTLSQDYFDMIRDRMYCDARNSKTRKSSATALQYILEI 754
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQGTF 1023
L API+ AEEV++ + F
Sbjct: 755 LCILTAPILSFTAEEVWASNGKKDSVF 781
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 232/434 (53%), Gaps = 31/434 (7%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+++ +E GK EF+LHDGPPYANG H+GH++NKI+KDI ++S L G +PGW
Sbjct: 42 QIFRKMKEQRKGKKEFVLHDGPPYANGNFHLGHSLNKIVKDIIVKSKSLAGFYADMIPGW 101
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN-C 121
DCHGLPIE LK + K + ++R+ +N+A E + Q + + L WE +
Sbjct: 102 DCHGLPIEVQVLKNLGKKARETGAEELRRLCRNYAEEFVGKQGEDLSRF--LCFWEEDRI 159
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ + F L+++ Y+YR KPVYWS TA AE+E+EY P H+S SIY+
Sbjct: 160 YKTMSPDFEAKIVEVFGELFQKGYVYRGKKPVYWSIDLATAHAEAEIEYYP-HISPSIYV 218
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK-GANVIVAKC 240
K + G LIWTTTPW+LPAN I FN +EYS+ + G I+A
Sbjct: 219 KFPIV--------GEQKKFCLIWTTTPWTLPANLGICFNRKIEYSIFKTESGEEFILADG 270
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
LVE++ V L + + HP R L V+ GTG VH A
Sbjct: 271 LVENVTSATGVSFNKVKSISSDELSALKFQHPFI--DRISIPLFGDHVTLDAGTGCVHTA 328
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VL 358
P HGQDD+ + LA + + + + G+Y+ D P ++G + D +++ L++ +L
Sbjct: 329 PGHGQDDYKVGLAAGLEPFSPVDDYGRYT-DEFPLMQGKKVF-DANPEIIQLLKDKNLLL 386
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWF--IDTERIKPEALVCKTVGNILGRVGITHDRP 416
+ ++HSYP+ WR+KKP+I +A+ QWF +D ++ ++L + GIT R
Sbjct: 387 YHSEFEHSYPHSWRSKKPLIFRATPQWFFKMDFNELREKSLSAIDGVRWIPSWGITRIR- 445
Query: 417 GTALAESELEYKPD 430
S +E +PD
Sbjct: 446 ------SMVEARPD 453
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 96/162 (59%), Gaps = 10/162 (6%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ + G+Y+ D P ++G + + +++ L++ +L+ ++HSYP+ WR+KKP+I
Sbjct: 350 VDDYGRYT-DEFPLMQGKKVF-DANPEIIQLLKDKNLLLYHSEFEHSYPHSWRSKKPLIF 407
Query: 1167 KASQQWF--IDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
+A+ QWF +D ++ ++L+ ++GV ++P +R + RP WC+SRQR WGVPIP
Sbjct: 408 RATPQWFFKMDFNELREKSLSAIDGVRWIPSWGITRIRSMVEARPDWCLSRQRNWGVPIP 467
Query: 1225 VFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F G T I ++ +I+ F ++ E G + W+S LL
Sbjct: 468 AFTCESCGQTHI-DDVSIQFFTKMVREKGIEIWYSEKATDLL 508
>gi|295398665|ref|ZP_06808689.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
gi|294973100|gb|EFG48903.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
Length = 929
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/641 (33%), Positives = 332/641 (51%), Gaps = 59/641 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EY+ D S SIY+ K L E + +IWTTTPW++P+N IA N
Sbjct: 197 STLAEAEIEYQ-DVESPSIYVAFKARDTKGKLPE---NTEFIIWTTTPWTIPSNMAIAVN 252
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCD-FPGQYLQDITYIHPINKEQR 535
P EYSV +V +VA LV +L + D V + G L+ + HP R
Sbjct: 253 PNFEYSVVAVADRKFVVATDLVNSLATELEWVDYTVEGEPVKGHDLEYMVAEHPYY--DR 310
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
D L+ V++ GTGLVH AP HG+DD+ +L + VL+ + +QG ++ D PG EG
Sbjct: 311 DSLLILGDHVTTESGTGLVHTAPGHGEDDYFASLNYNLDVLSPLDDQGHFT-DEAPGFEG 369
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ + + + E + L +Y HSYP+DWRTKKPVI +A+ QWF E+I+ L
Sbjct: 370 IFYEKGNEISIEKMKENNRLLKLDYFSHSYPHDWRTKKPVIYRATPQWFCSVEKIRERTL 429
Query: 655 ACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
++ EV + S + + + I R W ISRQRVWGVP+P+FY +G+ + E I+H
Sbjct: 430 DVIDNEVKWWHPSGQTRIYNMIRDRKDWVISRQRVWGVPLPIFYAENGEPVCTPET-IEH 488
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L DE G + W+ + LL + + N TK DI+D+WFDSG S VL+ +
Sbjct: 489 VANLFDEFGSNIWFEREAKDLLPEGFTHPASPNGEFTKEMDIMDVWFDSGSSHHGVLRTR 548
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLTSVA+ + AP+R+V GFV D +G KMSKS+GN
Sbjct: 549 EDLTFPADMYLEGSDQYRGWFHSSLLTSVAVNNEAPYRSVLSQGFVNDGEGRKMSKSIGN 608
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
+S +D+ + G D+LR WV++ V
Sbjct: 609 TVSPNDV-----------------------------IKQRGADILRLWVSS-VDTYYDVR 638
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I +IL ++ ++IR+++R+LLG L++ +++ +D YM+ RL E +
Sbjct: 639 ISDDILGQVAENYRRIRNTVRFLLGNLYDFDAKKDAVAYEDLASIDQYMMNRLNEMVRNV 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y F + + + NF+ ++S FY KD +Y + R + ++ + +
Sbjct: 699 RHAYDTFDFMTVNHEITNFLTLDMSNFYLDYAKDVVYIELPESAQRRNMQTVMYAVAKAV 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
+ P++PH EE++++L + ++ F + Y +
Sbjct: 759 TTLLTPVIPHTTEEIWTYLQEEEA-YAQLADFPEVVTYDNA 798
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 234/398 (58%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y+ ++E K ++LHDGPPYANG HIGHA+NKI KDI +RS + G R YVPGW
Sbjct: 41 DVYAQRQEKNKDKTPWVLHDGPPYANGNIHIGHAMNKISKDIIIRSKSMSGFRSPYVPGW 100
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T+ K ++ + RK + +A + IN Q+ +F+ GV DWE N Y
Sbjct: 101 DTHGLPIE-QALTNSGVDRKSMTVAEFRKLCEEYAWKQINGQRDDFKRLGVAGDWE-NPY 158
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ Q+ F ++Y++ IY+ KPVYWSPSS + LAE+E+EY+ D S SIY+
Sbjct: 159 LTLAPEFEAQQIRLFGDMYEKGLIYKGAKPVYWSPSSESTLAEAEIEYQ-DVESPSIYVA 217
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
K L E + +IWTTTPW++P+N IA NP EYSV +V +VA LV
Sbjct: 218 FKARDTKGKLPE---NTEFIIWTTTPWTIPSNMAIAVNPNFEYSVVAVADRKFVVATDLV 274
Query: 243 ESLKWTFQ-TDIEVVCD-FPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
SL + D V + G L+ + HP RD L+ V++ GTGLVH A
Sbjct: 275 NSLATELEWVDYTVEGEPVKGHDLEYMVAEHPYY--DRDSLLILGDHVTTESGTGLVHTA 332
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DD+ +L + VL+ + +QG ++ D PG EG+ + + + E + L
Sbjct: 333 PGHGEDDYFASLNYNLDVLSPLDDQGHFT-DEAPGFEGIFYEKGNEISIEKMKENNRLLK 391
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y HSYP+DWRTKKPVI +A+ QWF E+I+ L
Sbjct: 392 LDYFSHSYPHDWRTKKPVIYRATPQWFCSVEKIRERTL 429
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
L+ + +QG ++ D PG EG+ + + + E + L +Y HSYP+DWRTKKPV
Sbjct: 351 LSPLDDQGHFT-DEAPGFEGIFYEKGNEISIEKMKENNRLLKLDYFSHSYPHDWRTKKPV 409
Query: 1165 ILKASQQWFIDTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
I +A+ QWF E+I+ L ++ V + S + + + I R W ISRQRVWGVP+
Sbjct: 410 IYRATPQWFCSVEKIRERTLDVIDNEVKWWHPSGQTRIYNMIRDRKDWVISRQRVWGVPL 469
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+FY +G+ + E I+H L DE G + W+ + LL
Sbjct: 470 PIFYAENGEPVCTPET-IEHVANLFDEFGSNIWFEREAKDLL 510
>gi|343491877|ref|ZP_08730256.1| isoleucyl-tRNA synthetase [Mycoplasma columbinum SF7]
gi|343128331|gb|EGV00133.1| isoleucyl-tRNA synthetase [Mycoplasma columbinum SF7]
Length = 893
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 213/621 (34%), Positives = 326/621 (52%), Gaps = 73/621 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL--NQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
+ALAE+E+ YK D +S SIY+ K+ N + G + +IWTTTPW+L AN IA
Sbjct: 195 SALAEAEVVYK-DVVSPSIYVAFKIVNNNQSKKINNGD---YLVIWTTTPWTLIANAGIA 250
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY+ + IVA LVE + F+ T+ ++ F L ++ Y+ +N+
Sbjct: 251 VGEKIEYAKIKYQNNYFIVAADLVEKVAKEFEWTNYEIESTFKSDELVNMQYLSIVNQ-- 308
Query: 535 RDLKLLPAGF---VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
L P + VS G+GLVH AP G+DDF + + + + I N G
Sbjct: 309 ---NLAPVVYGHHVSLESGSGLVHIAPLFGEDDFQIGIKNSLNSIMHIENDG-------- 357
Query: 592 GLEGLNILGDGKDQVLH-----------LVEPDVLWTENYQHSYPYDWRTKKPVILKASQ 640
+N LG +++ + ++ +L HSYP+DWRT KP++ + +
Sbjct: 358 ---TINELGGKYEKMFYQKANNLIIEDLILNKTLLKNSTISHSYPHDWRTHKPILFRGTP 414
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 700
QWF+ ++IK E L LE+V PE AKK L + I++R W ISRQR WGVPI VFYD +
Sbjct: 415 QWFVSIDKIKREILTQLEKVQTYPEWAKKRLTNMISERYDWTISRQRTWGVPIIVFYDEN 474
Query: 701 TI-IVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISW 759
++ E + LI+++G D WWS S ++LL N T+ DI+D+WFDSG +
Sbjct: 475 QKPVLREDIFDYVIKLIEDNGADIWWSKSTDELLPEEYRNKGYTREMDIMDVWFDSGSTS 534
Query: 760 SHVLKD----KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
V D P +Y+EG DQ GWF SSL+ SVA P++N+ HGFV+D KG KM
Sbjct: 535 FAVEIDPSISAPYDLYLEGSDQYRGWFNSSLINSVAYAGVTPYKNLVSHGFVLDAKGEKM 594
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS GNV+ I + + G D+LR WV A++
Sbjct: 595 SKSKGNVVDPLKIIKKS-----------------------------GADILRLWV-ANSE 624
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYMLKRLCEFQN 935
V I NI+N + + +KIR+++++LLG L+ + + V ++ + L +F+
Sbjct: 625 YTNDVTISDNIINQNSEIYRKIRNTIKFLLGNLNGFKYDSSLERKGVHAFIKEELEKFKT 684
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ T Y E+++ ++L N+VVN LS+FY + KD LY + +N + RL L + I
Sbjct: 685 EIITAYNEYKFINVVKLLNNYVVN-LSSFYLNITKDILYVEELNSQERLMTLTNFYEIAD 743
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
+++T+API+P AE+ Y +
Sbjct: 744 FIIKTIAPILPTTAEDAYMYF 764
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 225/412 (54%), Gaps = 41/412 (9%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y E P FILHDGPPYANG HIGHA+NKILKDI +R + G +VPGW
Sbjct: 38 QIYKKVLEQNKNNPSFILHDGPPYANGNLHIGHAMNKILKDIIVRYKSMSGFYSPFVPGW 97
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HG+PIE K + K L PL++R+KA +ALE + QKA+F+ +L D+E Y
Sbjct: 98 DTHGMPIEHKMLEQAQLNFKNLDPLELRQKAAKYALEQVEIQKAQFKEMQMLTDFEK-YY 156
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T DK++V QL F + +Y+ LKPVYWSPSS++ALAE+E+ YK D VS SIY+
Sbjct: 157 ITLDKKFVAKQLKLFKKMVFSGLVYKGLKPVYWSPSSQSALAEAEVVYK-DVVSPSIYVA 215
Query: 183 IKL--NQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKC 240
K+ N + G + +IWTTTPW+L AN IA +EY+ + IVA
Sbjct: 216 FKIVNNNQSKKINNGD---YLVIWTTTPWTLIANAGIAVGEKIEYAKIKYQNNYFIVAAD 272
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF---VSSSKGTGL 296
LVE + F+ T+ E+ F L ++ Y+ +N+ L P + VS G+GL
Sbjct: 273 LVEKVAKEFEWTNYEIESTFKSDELVNMQYLSIVNQ-----NLAPVVYGHHVSLESGSGL 327
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH----- 351
VH AP G+DDF + + + + I N G +N LG +++ +
Sbjct: 328 VHIAPLFGEDDFQIGIKNSLNSIMHIENDG-----------TINELGGKYEKMFYQKANN 376
Query: 352 ------LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
++ +L HSYP+DWRT KP++ + + QWF+ ++IK E L
Sbjct: 377 LIIEDLILNKTLLKNSTISHSYPHDWRTHKPILFRGTPQWFVSIDKIKREIL 428
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRT KP++ + + QWF+ ++IK E L LE V PE AKK L + I++R W
Sbjct: 396 HSYPHDWRTHKPILFRGTPQWFVSIDKIKREILTQLEKVQTYPEWAKKRLTNMISERYDW 455
Query: 1212 CISRQRVWGVPIPVFYDGDTI-IVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
ISRQR WGVPI VFYD + ++ E + LI+++G D WWS ++LL
Sbjct: 456 TISRQRTWGVPIIVFYDENQKPVLREDIFDYVIKLIEDNGADIWWSKSTDELL 508
Score = 44.3 bits (103), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1087
+I K ILY + +N + RL L + I +++T+API+P AE+ Y +
Sbjct: 715 NITKDILYVEELNSQERLMTLTNFYEIADFIIKTIAPILPTTAEDAYMYF 764
>gi|310778463|ref|YP_003966796.1| isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
gi|309747786|gb|ADO82448.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
Length = 931
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 210/639 (32%), Positives = 337/639 (52%), Gaps = 62/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLE--GATDLHALIWTTTPWSLPANQFIA 475
TALAE+E+EYK +H+S SIY+K++ N + LLE G + +IWTTTPW++PAN I
Sbjct: 194 TALAEAEIEYK-NHVSPSIYVKMEAN---SDLLEKLGLDEASLVIWTTTPWTIPANVAIC 249
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQ 534
N EY V + N+I+AK L E + ++++ +F G L+ TY HP
Sbjct: 250 LNAEFEYGVYKTEKGNLILAKGLSEKAFADMGIENVELLKEFTGDKLERTTYKHPFL--D 307
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V+ GTG VH AP HGQDD+++ +PV++ I N+G + +AG
Sbjct: 308 RTGVVILGEHVTMEAGTGCVHTAPGHGQDDYVVGTRYGLPVISPINNKGHLTEEAGK-FA 366
Query: 595 GLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE--RIKP 651
G+ K+ H+ E +L + +HSYP+DWR+K PVI +A++QWF+ E ++
Sbjct: 367 GMFYKKANKEIAAHMDETGHLLMLKEIEHSYPHDWRSKTPVIFRATEQWFVRAEGSDLRE 426
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYD---GDTIIVNEAN 708
+AL +E+V+F+P + + + RP WCISRQR+WGVPIP+FY+ G+ I E
Sbjct: 427 KALKAIEDVDFIPAWGRNRISTMLESRPDWCISRQRIWGVPIPIFYNEATGEEIFYGEI- 485
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNS------NVTKSNDILDIWFDSGISWSHV 762
I ++ + G W S E+L+ + + K +I+D+WFDSG+S V
Sbjct: 486 IDRVIGIVKKEGTIAWVKYSPEELIGEELLEKYNLAGLELRKETNIMDVWFDSGVSHRSV 545
Query: 763 LK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
L+ +PA +Y+EG DQ GWF +SLLTS+ AP++ V HGFV D +G KMSK
Sbjct: 546 LETRENLKRPADLYLEGSDQHRGWFQTSLLTSIGSTGDAPYKQVLTHGFVNDGEGKKMSK 605
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S GNV+S D+ + YG D+LR W A+ ++
Sbjct: 606 STGNVMSPDDV-----------------------------IKTYGADILRLWCASVDYRE 636
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEF 933
V I +NIL + +++R++ RY+LG ++ +S +D + + +L
Sbjct: 637 -DVKISENILKQMAEAYRRVRNTARYILGNTNDFDPIKDRVSYDELPEIDRWAMHKLETL 695
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++++ + F ++SAFY ++KDRLY ++ + R + ++ +
Sbjct: 696 KRKVTENYNKYEFYNLFHDIHYFAGIDMSAFYLDIIKDRLYAENGDSVDRRAAQTVMYEV 755
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVY 1032
+ + +API+ AEE++S +P S K Y
Sbjct: 756 LVSMNKMIAPILSFTAEEIWSKIPETSKDAESILISKWY 794
Score = 306 bits (784), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/387 (43%), Positives = 237/387 (61%), Gaps = 16/387 (4%)
Query: 12 REALNGK-PEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
+++L GK +FILHDGPPYANG HIGHA+NKILKDI L+ LQG Y+PGWD HGL
Sbjct: 42 KKSLEGKEKQFILHDGPPYANGNIHIGHALNKILKDIILKYKRLQGYNAPYIPGWDTHGL 101
Query: 71 PIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
PIELK + K +SPL IR K +A + + QK++F GV+ DW+ N Y T +
Sbjct: 102 PIELKVTEELGEAAKDMSPLKIRDKCTKYAKKWVQKQKSDFIRLGVMGDWD-NPYLTLNP 160
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY QL F LY+ YI++ LKP+YWSP++ TALAE+E+EYK +HVS SIY+K++ N
Sbjct: 161 EYEAKQLEVFKELYENGYIFKGLKPIYWSPATETALAEAEIEYK-NHVSPSIYVKMEAN- 218
Query: 188 VPAHLLE--GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESL 245
+ LLE G + +IWTTTPW++PAN I N EY V + N+I+AK L E
Sbjct: 219 --SDLLEKLGLDEASLVIWTTTPWTIPANVAICLNAEFEYGVYKTEKGNLILAKGLSEKA 276
Query: 246 KWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHG 304
+ +E++ +F G L+ TY HP R ++ V+ GTG VH AP HG
Sbjct: 277 FADMGIENVELLKEFTGDKLERTTYKHPF--LDRTGVVILGEHVTMEAGTGCVHTAPGHG 334
Query: 305 QDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-VLWTENY 363
QDD+++ +PV++ I N+G + +AG G+ K+ H+ E +L +
Sbjct: 335 QDDYVVGTRYGLPVISPINNKGHLTEEAGK-FAGMFYKKANKEIAAHMDETGHLLMLKEI 393
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTE 390
+HSYP+DWR+K PVI +A++QWF+ E
Sbjct: 394 EHSYPHDWRSKTPVIFRATEQWFVRAE 420
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILK 1167
I N+G + +AG G+ K+ H+ E +L + +HSYP+DWR+K PVI +
Sbjct: 352 INNKGHLTEEAGK-FAGMFYKKANKEIAAHMDETGHLLMLKEIEHSYPHDWRSKTPVIFR 410
Query: 1168 ASQQWFIDTE--RIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A++QWF+ E ++ +AL +E V+F+P + + + RP WCISRQR+WGVPIP+
Sbjct: 411 ATEQWFVRAEGSDLREKALKAIEDVDFIPAWGRNRISTMLESRPDWCISRQRIWGVPIPI 470
Query: 1226 FYD---GDTIIVNEANIKHFCTLIDEHGPDFW 1254
FY+ G+ I E I ++ + G W
Sbjct: 471 FYNEATGEEIFYGEI-IDRVIGIVKKEGTIAW 501
>gi|410583555|ref|ZP_11320661.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
gi|410506375|gb|EKP95884.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
Length = 939
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 216/624 (34%), Positives = 318/624 (50%), Gaps = 58/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY+ + S SIY+ + L GA +IWTTTPW++PAN IA +
Sbjct: 192 TALAEAEIEYR-EKTSPSIYVAFPVVDGRGRLPGGA---RLVIWTTTPWTIPANLAIAVH 247
Query: 478 PALEYSVASVKGANVIVAKCLVEN-LKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y ++VA+ LVE L + + G L+ +TY HP+ R
Sbjct: 248 PEARYVAVETGRGLLVVAEPLVERVLAAAGLEERGRSGPWTGAELEGVTYRHPLF--DRT 305
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ A VS +GTGLVH AP HGQ+DF + +PVL+ + G+++ +AGP GL
Sbjct: 306 SPVVLAEHVSMEEGTGLVHTAPGHGQEDFEVGRRYGLPVLSPVDASGRFTGEAGP-FAGL 364
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
D + +E +L +H Y + WR ++PVI +A+ QWF E + +AL
Sbjct: 365 -FYADANPHITRALEEAGALLAQGTIRHQYAHCWRCRQPVIFRATTQWFASVEGFRRQAL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
++ V ++PE ++ + + +A R WCISRQR WGVPIPVFY ++ E +I+
Sbjct: 424 EAIDGVRWIPEWGRERIHNMVADRGDWCISRQRAWGVPIPVFYCEACQEPVITEESIRAV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTS------DVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L G + W+ Q+L K DI+D+WFDSG S + VL+ +
Sbjct: 484 AELFRREGSNAWFLREAAQILPEGFACPHCGSRQGFRKETDIMDVWFDSGSSHAAVLETR 543
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLT+VA + AP+R V HGFVVD +G KMSKS+GN
Sbjct: 544 EDLTWPADLYLEGSDQHRGWFQSSLLTAVATRGRAPYRAVLTHGFVVDGEGRKMSKSLGN 603
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
V+ +D+ + YG DVLR W A + V
Sbjct: 604 VVDPNDVIR-----------------------------RYGADVLRLW-AVSSDYRGDVR 633
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I ++IL + +KIR++LR+LL L + + ++ +D + L RL + +
Sbjct: 634 ISEDILKQMAEVYRKIRNTLRFLLANLGDFDPARDAVPYGELGELDRWALARLAQVTERV 693
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+QY + NF V +LSAFY ++KDRLY R + L+ + L
Sbjct: 694 RRAYEEYQYHLVYHAVHNFCVTDLSAFYLDVLKDRLYASLPADPRRRAAQTVLYQLARHL 753
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQG 1021
+AP++ H AEEV+ HLP +G
Sbjct: 754 TLLLAPVLCHTAEEVWGHLPRLEG 777
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 225/398 (56%), Gaps = 15/398 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY R+A G+P F+LHDGPPYANG H+G A+NKILKD+ +R + G YVPGW
Sbjct: 35 DLYRRLRQARRGRPRFVLHDGPPYANGDIHVGTALNKILKDVVVRHASMAGYDAPYVPGW 94
Query: 66 DCHGLPIELKAIT---SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+ + +SP+++R + +++AL+ +N Q+ +F GVL DWE Y
Sbjct: 95 DTHGLPIERRALEVLGVDRRAISPVELRNRCRDYALDQMNRQRQQFRRLGVLGDWERP-Y 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T + EY Q+ F + ++ YIYR+L VYW P TALAE+E+EY+ + S SIY+
Sbjct: 154 LTLEPEYEAKQIEVFGEMARRGYIYRNLYSVYWCPVDETALAEAEIEYR-EKTSPSIYVA 212
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L GA +IWTTTPW++PAN IA +P Y ++VA+ LV
Sbjct: 213 FPVVDGRGRLPGGA---RLVIWTTTPWTIPANLAIAVHPEARYVAVETGRGLLVVAEPLV 269
Query: 243 ES-LKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E L + + G L+ +TY HP+ R ++ A VS +GTGLVH AP
Sbjct: 270 ERVLAAAGLEERGRSGPWTGAELEGVTYRHPLF--DRTSPVVLAEHVSMEEGTGLVHTAP 327
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP--DVLW 359
HGQ+DF + +PVL+ + G+++ +AGP GL D + +E +L
Sbjct: 328 GHGQEDFEVGRRYGLPVLSPVDASGRFTGEAGP-FAGL-FYADANPHITRALEEAGALLA 385
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+H Y + WR ++PVI +A+ QWF E + +AL
Sbjct: 386 QGTIRHQYAHCWRCRQPVIFRATTQWFASVEGFRRQAL 423
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPV 1164
L+ + G+++ +AGP GL L E L + +H Y + WR ++PV
Sbjct: 345 LSPVDASGRFTGEAGP-FAGLFYADANPHITRALEEAGALLAQGTIRHQYAHCWRCRQPV 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF E + +AL ++GV ++PE ++ + + +A R WCISRQR WGVPIP
Sbjct: 404 IFRATTQWFASVEGFRRQALEAIDGVRWIPEWGRERIHNMVADRGDWCISRQRAWGVPIP 463
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY ++ E +I+ L G + W+ Q+L
Sbjct: 464 VFYCEACQEPVITEESIRAVAELFRREGSNAWFLREAAQIL 504
>gi|424873899|ref|ZP_18297561.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393169600|gb|EJC69647.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 982
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 224/666 (33%), Positives = 334/666 (50%), Gaps = 99/666 (14%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL-NQVPAHLLEGAT--------------DLHALIWT 462
TALAE+E+EY D+ S +I++K + V A T D +IWT
Sbjct: 202 TALAEAEVEYH-DYESDTIWVKFPVVRGVTADYRRDGTSPTADEVNPPLVKEDAFIVIWT 260
Query: 463 TTPWSLPANQFIAFNPALEYSVASVK----------GANVIVAKCLVENLKWTFQTDIDV 512
TTPW++P N+ IAF+ LEY + V+ G ++ AK L ++ + +
Sbjct: 261 TTPWTIPGNRAIAFSARLEYGLYEVESATNDFGPQPGERLVFAKRLADDCASKAKVTLRF 320
Query: 513 VCDFPGQYLQDITYIHPI----NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF--- 565
V D G L ++ HP+ N D+ LL V+ GTG VH AP+HG++DF
Sbjct: 321 VRDVSGDELSNVVCAHPLRNLDNGYTFDVPLLDGDHVTDDAGTGFVHTAPSHGREDFDAW 380
Query: 566 --------LLALAEKIPVLNLITNQGKYSPDAGPGLEGLNIL------GDGKDQVLH-LV 610
+ KIP + + G Y+ DA PGLEG ++ GD D+V+ L+
Sbjct: 381 MSAVRTLEARGIDTKIPFP--VDDGGFYTADA-PGLEGARVIDDNGKKGDANDRVIRELI 437
Query: 611 EPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFI-------DTERIKPEALACLEEVNF 662
L+ +H YP+ WR+KKPVI + + QWF+ D ++ AL +++ F
Sbjct: 438 ARGALFARGRLKHQYPHSWRSKKPVIFRNTPQWFVYMDKTLADGTTLRSRALGAIDDTRF 497
Query: 663 VPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGP 721
VP + + LR I RP W +SRQR WGVPI VF D + ++V+EA ++ G
Sbjct: 498 VPAAGQNRLRAMIEGRPDWVLSRQRAWGVPIAVFADDEGEVLVDEAVNARILEAFEDEGA 557
Query: 722 DFWWSLSV-EQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP-----AHVYMEGM 775
D W++ E+ L +S T+ DILD+WFDSG + + L+D+P A +Y+EG
Sbjct: 558 DAWFAEGAKERFLGNDHDHSRWTQVMDILDVWFDSGSTHTFTLEDRPDLKWPADLYLEGS 617
Query: 776 DQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKL 835
DQ GWF SSLL S A + AP+ V HGF +DEKG KMSKS GNV + ++ + A
Sbjct: 618 DQHRGWFHSSLLESAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDA--- 674
Query: 836 PAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQ 895
G D+LR WV D + +GK I+ ++ D +
Sbjct: 675 --------------------------GADILRLWVMTSDYAD-DLRVGKTIIQTNVDAYR 707
Query: 896 KIRSSLRYLLGVL-HNHSESTGSISR-YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVL 953
K+R+++R++LG L H+ E ++ ML RL E + Y F + + +R L
Sbjct: 708 KLRNTIRWMLGTLAHDKGEEIALADLPELEQLMLHRLTELDELVRENYDAFDFKKIARAL 767
Query: 954 LNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
++F ELSAFYF + KD LYCD+ + R + LH + IF ++ +AP++P EE +
Sbjct: 768 IDFANVELSAFYFDVRKDALYCDAPSSLRRRASLHVIRQIFDCMVTWLAPMLPFTTEEAW 827
Query: 1014 -SHLPS 1018
S PS
Sbjct: 828 LSRNPS 833
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 239/482 (49%), Gaps = 63/482 (13%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY R + G+ +F+LHDGPPYANG HIGHA+NKILKD+ RS ++G +YVPGWD
Sbjct: 43 LYKKLRASAAGREKFVLHDGPPYANGNIHIGHALNKILKDVINRSFQMRGYDANYVPGWD 102
Query: 67 CHGLPIELK-----AITSKDKLLSPL-DIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
CHGLPIE K K+K P+ + RK+ + FA I Q EF+ G+ D++ N
Sbjct: 103 CHGLPIEWKIEEKYREKGKNKDEVPVNEFRKECREFAAGWIKVQAEEFKRLGIEGDFD-N 161
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T + + + +YR KP+ WS RTALAE+E+EY D+ S +I+
Sbjct: 162 PYTTMNFHAESRIAGELLKIAASGQLYRGSKPIMWSVVERTALAEAEVEYH-DYESDTIW 220
Query: 181 LKIK-LNQVPAHLLEGAT--------------DLHALIWTTTPWSLPANQFIAFNPALEY 225
+K + V A T D +IWTTTPW++P N+ IAF+ LEY
Sbjct: 221 VKFPVVRGVTADYRRDGTSPTADEVNPPLVKEDAFIVIWTTTPWTIPGNRAIAFSARLEY 280
Query: 226 SVASVK----------GANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPI-- 273
+ V+ G ++ AK L + + + V D G L ++ HP+
Sbjct: 281 GLYEVESATNDFGPQPGERLVFAKRLADDCASKAKVTLRFVRDVSGDELSNVVCAHPLRN 340
Query: 274 --NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDF-----------LLALAEKIPVLN 320
N D+ LL V+ GTG VH AP+HG++DF + KIP
Sbjct: 341 LDNGYTFDVPLLDGDHVTDDAGTGFVHTAPSHGREDFDAWMSAVRTLEARGIDTKIPF-- 398
Query: 321 LITNQGKYSPDAGPGLEGLNIL------GDGKDQVLH-LVEPDVLWTE-NYQHSYPYDWR 372
+ + G Y+ DA PGLEG ++ GD D+V+ L+ L+ +H YP+ WR
Sbjct: 399 PVDDGGFYTADA-PGLEGARVIDDNGKKGDANDRVIRELIARGALFARGRLKHQYPHSWR 457
Query: 373 TKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITHDRP--GTALAESELEYKPD 430
+KKPVI + + QWF+ ++ + ++ LG + T P G + +E +PD
Sbjct: 458 SKKPVIFRNTPQWFVYMDKTLADGTTLRS--RALGAIDDTRFVPAAGQNRLRAMIEGRPD 515
Query: 431 HI 432
+
Sbjct: 516 WV 517
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1109 ITNQGKYSPDAGPGLEGLNIL------GEGKDQVLH-LVEPDVLWTE-NYQHSYPYDWRT 1160
+ + G Y+ DA PGLEG ++ G+ D+V+ L+ L+ +H YP+ WR+
Sbjct: 400 VDDGGFYTADA-PGLEGARVIDDNGKKGDANDRVIRELIARGALFARGRLKHQYPHSWRS 458
Query: 1161 KKPVILKASQQWFI-------DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCI 1213
KKPVI + + QWF+ D ++ AL ++ FVP + + LR I RP W +
Sbjct: 459 KKPVIFRNTPQWFVYMDKTLADGTTLRSRALGAIDDTRFVPAAGQNRLRAMIEGRPDWVL 518
Query: 1214 SRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWS 1256
SRQR WGVPI VF D + ++V+EA ++ G D W++
Sbjct: 519 SRQRAWGVPIAVFADDEGEVLVDEAVNARILEAFEDEGADAWFA 562
>gi|339448180|ref|ZP_08651736.1| isoleucyl-tRNA synthetase [Lactobacillus fructivorans KCTC 3543]
Length = 933
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 211/620 (34%), Positives = 319/620 (51%), Gaps = 58/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S + K+ L D + ++WTTTPW++P ++ I
Sbjct: 191 SALAEAEVEYH-DVTSPSAFFAEKVIDGNGVL---DNDTYMVVWTTTPWTIPGSEGITVE 246
Query: 478 PALEYSVASVKG---ANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
P +YS+ VI L ++ + ++ + G+ L +I HP +
Sbjct: 247 PDFDYSIIQHDDDPKKYVIGTDLLDQDAEMFGWKNVRTLQTVKGKDLDNIKAQHPFD-SS 305
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R L ++ FV++ GTGLVH AP G+DD+ + + + V + ++G + +AGP E
Sbjct: 306 RQLVVMNGDFVTNDAGTGLVHTAPGFGEDDYNIGMQYGLDVFAPVDSKGYLTKEAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEP-DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ + + L E ++ Y+HSYP+DWRTKKPVI +A+ QWF ++I+ E
Sbjct: 366 GVFYEDANQIALDKLKEQGQLIHYMPYKHSYPFDWRTKKPVIYRATPQWFASVDKIRKEI 425
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L ++ V F P +K L + I R W ISRQRVWGVP+P+FY DG+ II +E I+H
Sbjct: 426 LDAIDTVGFNPSWGQKRLYNMIRDRGDWVISRQRVWGVPLPIFYGEDGEPIITDET-IEH 484
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L ++G D W+ + LL + N TK DI+D+WFDSG S VL ++
Sbjct: 485 IADLFGQYGSDIWFERDAKDLLPEGFTSKHSPNGKFTKETDIMDVWFDSGTSHQGVLAER 544
Query: 767 PAHVY-----MEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P Y +EG DQ GWF SSL+TSVA AP+++V GF +D+KG KMSKS+GN
Sbjct: 545 PNLTYPSDLVVEGSDQYRGWFNSSLITSVAYADIAPYKHVLSQGFTLDKKGHKMSKSLGN 604
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTV 880
I+ D+ + G D++R WV + S D V
Sbjct: 605 TIAPSDV-----------------------------IKQMGADIVRLWVTSVDTSADVRV 635
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+G D +KIR+++RY+L + + +I VD YML RL +
Sbjct: 636 SMGN--FKVVSDSYKKIRNTIRYMLANTSDFDPESDAIKYEDMNSVDQYMLIRLNQLIQN 693
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++ + ++ LL+F+ ++LSAFY KD LY D NG+ R S L+ I
Sbjct: 694 VKDDYDQYDFMSINKELLSFITSDLSAFYLDFAKDILYIDPKNGQRRRSMQTVLYTILVA 753
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++S L
Sbjct: 754 LTKLMTPIIPHTTEEIWSFL 773
Score = 260 bits (664), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 228/407 (56%), Gaps = 15/407 (3%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR+ LN GKP F+LHDGPPYANG H+GHA+NKI KD+ +R + G R YVP
Sbjct: 34 NQLYQ-QRQKLNEGKPSFVLHDGPPYANGDIHMGHAMNKITKDMIVRFKSMNGYRAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLPIE LK K +S + RK ++AL+ ++ Q+ EF+ GV ADW+ N
Sbjct: 93 GWDTHGLPIEQQLKKKGYNRKKMSTNEFRKLCHDYALKQVDRQRDEFKRLGVSADWD-NP 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY ++ F + + IY+ LKPV WS SS +ALAE+E+EY D S S +
Sbjct: 152 YLTLMPEYEAAEVRVFGKMADRGLIYKGLKPVIWSWSSESALAEAEVEYH-DVTSPSAFF 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG---ANVIVA 238
K+ L D + ++WTTTPW++P ++ I P +YS+ VI
Sbjct: 211 AEKVIDGNGVL---DNDTYMVVWTTTPWTIPGSEGITVEPDFDYSIIQHDDDPKKYVIGT 267
Query: 239 KCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
L + + ++ + G+ L +I HP + R L ++ FV++ GTGLVH
Sbjct: 268 DLLDQDAEMFGWKNVRTLQTVKGKDLDNIKAQHPFD-SSRQLVVMNGDFVTNDAGTGLVH 326
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEP-DV 357
AP G+DD+ + + + V + ++G + +AGP EG+ + + L E +
Sbjct: 327 TAPGFGEDDYNIGMQYGLDVFAPVDSKGYLTKEAGPDFEGVFYEDANQIALDKLKEQGQL 386
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL-VCKTVG 403
+ Y+HSYP+DWRTKKPVI +A+ QWF ++I+ E L TVG
Sbjct: 387 IHYMPYKHSYPFDWRTKKPVIYRATPQWFASVDKIRKEILDAIDTVG 433
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 96/167 (57%), Gaps = 22/167 (13%)
Query: 1109 ITNQGKYSPDAGPGLEG----------LNILGEGKDQVLHLVEPDVLWTENYQHSYPYDW 1158
+ ++G + +AGP EG L+ L E + Q++H + Y+HSYP+DW
Sbjct: 350 VDSKGYLTKEAGPDFEGVFYEDANQIALDKLKE-QGQLIHYMP--------YKHSYPFDW 400
Query: 1159 RTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRV 1218
RTKKPVI +A+ QWF ++I+ E L ++ V F P +K L + I R W ISRQRV
Sbjct: 401 RTKKPVIYRATPQWFASVDKIRKEILDAIDTVGFNPSWGQKRLYNMIRDRGDWVISRQRV 460
Query: 1219 WGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
WGVP+P+FY DG+ II +E I+H L ++G D W+ + LL
Sbjct: 461 WGVPLPIFYGEDGEPIITDET-IEHIADLFGQYGSDIWFERDAKDLL 506
>gi|402547144|ref|ZP_10844017.1| isoleucine--tRNA ligase [Campylobacter sp. FOBRC14]
gi|401016979|gb|EJP75742.1| isoleucine--tRNA ligase [Campylobacter sp. FOBRC14]
Length = 919
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 217/632 (34%), Positives = 324/632 (51%), Gaps = 72/632 (11%)
Query: 418 TALAESELEY--KPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIA 475
+ALAE+E+EY K D+ SIY+ +L+ L G A+IWTTTPW+LPANQ I+
Sbjct: 194 SALAEAEVEYENKEDY---SIYVAFELDSDALAKL-GVKQAKAVIWTTTPWTLPANQAIS 249
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
P Y + S N+I AK L+E+L T +++ +F L++ I+P+N R
Sbjct: 250 LKPDEIYVLTS---ENLIFAKPLLESLVNLGLTKGEILKEFVSNELENTHAINPLN--DR 304
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIP-VLNLITNQGKYS-------- 586
+ L V GTGLVH AP HG+DD+ + L +L + + G Y
Sbjct: 305 KSRFLLGDHVLMDGGTGLVHTAPGHGEDDYYICLRYGFKEILMPVDDGGLYDETLRAHSL 364
Query: 587 --PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
D G++I ++++ L+ ++L + HSYP+ WRT KPVI +A++QWFI
Sbjct: 365 LRADVVDSFVGMHIF-KANEKIIKLLGENLLHVSKFTHSYPFCWRTHKPVIYRATKQWFI 423
Query: 645 DTER-------IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY 697
+ ++ A LE V F P K + I RP WCISRQR WGVPI F
Sbjct: 424 AMDEPKLGGKTLREVARGELENVKFYPSVGIKRIGSMIENRPDWCISRQRDWGVPIAFFR 483
Query: 698 DGDTI--IVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--NTSDVNSNVTKSNDILDIWF 753
DT I ++H + ++ G D WW +SVE+LL ++ N+ K DILD+WF
Sbjct: 484 RKDTKEPIFEPKILEHIAKIFEQKGADAWWDMSVEELLAPDSGFEAKNLEKVMDILDVWF 543
Query: 754 DSGISWSHVLKDK-------PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGF 806
DSG +W VL K PA +Y+EG DQ GWF SSLL S A+ AP++N+ HGF
Sbjct: 544 DSGSTWHAVLNSKNYDAGSYPADMYLEGSDQHRGWFQSSLLVSTAINSHAPYKNILTHGF 603
Query: 807 VVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVL 866
VDE G KMSKS GNV++ D+ + +YGV++L
Sbjct: 604 TVDENGQKMSKSKGNVVAPQDVAK-----------------------------SYGVEIL 634
Query: 867 RWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDVYM 926
R WV + + I +NIL + +KIR+++R+LL + N E+ + ++D ++
Sbjct: 635 RLWVGL-SDYSSDLKISENILKQVSEQYRKIRNTIRFLLANV-NDLETISTDFGFLDQWI 692
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L R + + + +++ +LLNF+ +LS Y + KDRLYCD+ + R S
Sbjct: 693 LGRAKRVFDEASKCFRAYDFSKGFNLLLNFLSADLSGIYLDICKDRLYCDAKDAPRRRSA 752
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
+ I LL +AP + + +EV + P+
Sbjct: 753 QSAMAIITKSLLPLIAPTLTYTVDEVMDYAPA 784
Score = 246 bits (628), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 216/383 (56%), Gaps = 27/383 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKA---I 77
F +HDGPPYANG HIGHA+NKILKDI +++ G+ V YVPGWDCHGLPIE + +
Sbjct: 52 FAIHDGPPYANGHLHIGHALNKILKDIITKTHYFFGENVRYVPGWDCHGLPIEQQVEVKL 111
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
K K LS IR+ + A E I+ Q+ EF++ G++ D+E N Y T E+ +
Sbjct: 112 GDKKKELSKTQIRELCRAHAREFIDIQREEFKALGIIGDFE-NPYMTMKFEFEADIYRSL 170
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEY--KPDHVSKSIYLKIKLNQVPAHLLEG 195
+ K+ + KPVYWS ++++ALAE+E+EY K D+ SIY+ +L+ L G
Sbjct: 171 CEIAKKGLLIERSKPVYWSWAAKSALAEAEVEYENKEDY---SIYVAFELDSDALAKL-G 226
Query: 196 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTDIEV 255
A+IWTTTPW+LPANQ I+ P Y + S N+I AK L+ESL T E+
Sbjct: 227 VKQAKAVIWTTTPWTLPANQAISLKPDEIYVLTS---ENLIFAKPLLESLVNLGLTKGEI 283
Query: 256 VCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEK 315
+ +F L++ I+P+N R + L V GTGLVH AP HG+DD+ + L
Sbjct: 284 LKEFVSNELENTHAINPLN--DRKSRFLLGDHVLMDGGTGLVHTAPGHGEDDYYICLRYG 341
Query: 316 IP-VLNLITNQGKYS----------PDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQ 364
+L + + G Y D G++I ++++ L+ ++L +
Sbjct: 342 FKEILMPVDDGGLYDETLRAHSLLRADVVDSFVGMHIF-KANEKIIKLLGENLLHVSKFT 400
Query: 365 HSYPYDWRTKKPVILKASQQWFI 387
HSYP+ WRT KPVI +A++QWFI
Sbjct: 401 HSYPFCWRTHKPVIYRATKQWFI 423
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 1125 GLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER------ 1178
G++I + ++++ L+ ++L + HSYP+ WRT KPVI +A++QWFI +
Sbjct: 375 GMHIF-KANEKIIKLLGENLLHVSKFTHSYPFCWRTHKPVIYRATKQWFIAMDEPKLGGK 433
Query: 1179 -IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTI--IVN 1235
++ A LE V F P K + I RP WCISRQR WGVPI F DT I
Sbjct: 434 TLREVARGELENVKFYPSVGIKRIGSMIENRPDWCISRQRDWGVPIAFFRRKDTKEPIFE 493
Query: 1236 EANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
++H + ++ G D WW + VE+LL
Sbjct: 494 PKILEHIAKIFEQKGADAWWDMSVEELL 521
>gi|422863095|ref|ZP_16909727.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK408]
gi|327473395|gb|EGF18815.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK408]
Length = 930
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 322/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F D+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWADVQVLATYRGQELNHIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANDLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL ++ N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKRGAKDLLPEGFTHSGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRSE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------HFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++LR+L+ + + + +++ R VD YM R + T+
Sbjct: 635 MDILGQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R +++ + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDVLVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L + F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEEEEF 778
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWADVQVLATYRGQELNHIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANDLEVFVTVNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKRGAKDLL 504
>gi|365903046|ref|ZP_09440869.1| isoleucyl-tRNA synthetase [Lactobacillus malefermentans KCTC 3548]
Length = 933
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 210/626 (33%), Positives = 323/626 (51%), Gaps = 59/626 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+A+AE+E+EY D S S + K+ L T + ++WTTTPW++PA++ I +
Sbjct: 191 SAMAEAEVEYH-DVTSPSAFYGEKVVDGKGILDNEVT--YLVVWTTTPWTIPASEGITVD 247
Query: 478 PALEYSVA--SVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+YSV ++A LV F DI V G L + HP E+
Sbjct: 248 ANFDYSVVKHDEDERQFVIATELVSEAAEKFGWKDIQTVKTLKGSQLDRVLCQHPFYPER 307
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+ + +L FV+ GTGLVH AP G DD+ + + + VL + ++G + +AG E
Sbjct: 308 KLVTML-GNFVTLEAGTGLVHTAPGFGMDDWQVGMKYGLDVLVPVDDKGFMTAEAGKDFE 366
Query: 595 GLNILGDGKDQVL--HLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G + D +Q+ L E ++L Y+HSYP+DWRTKKPVI +A+ QWF ++IK
Sbjct: 367 G--VFYDDANQIALDKLKEQNLLLDYMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIKD 424
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E L +++V F P K+ L + I R W ISRQRVWGVP+P+FY DG+ II E I
Sbjct: 425 EILGAIDDVEFFPGWGKRRLYNMIKDRGDWVISRQRVWGVPLPIFYGEDGEAIITPET-I 483
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L +++G D W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 484 NHVADLFEQYGSDVWFDREAKDLLPDNFKSDHSPNGKFTKETDIMDVWFDSGSSHQGVLA 543
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D +G KMSKS+
Sbjct: 544 ERDNLDYPADLYLEGSDQYRGWFNSSLITSVAFSGKAPYKKLLSQGFTLDSQGHKMSKSL 603
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ ++ + G +++R WV++ S
Sbjct: 604 GNTIAPAEV-----------------------------IKRMGAEIIRLWVSSVDSS-AD 633
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + + D +K+R++LRYLL + T +++ D +ML +L +F +
Sbjct: 634 VRVSMDAFAKISDSYKKLRNTLRYLLANTSDFDPKTNAVADDDLESADKFMLIKLNDFIS 693
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
++ Y +F + + L+NFV+ +LSAFY KD LY DS++ + R S + +
Sbjct: 694 EVEADYEKFDFLNIYKKLMNFVITDLSAFYLDFAKDLLYIDSVDSQTRRSMQTVFYKVLV 753
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQG 1021
L++ + PI+PH EE++ L +
Sbjct: 754 SLVKLLTPILPHTTEEIWEFLDESEA 779
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 223/399 (55%), Gaps = 15/399 (3%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +++ GKP FILHDGPPYANG H+GHA+NKI KD +R + G R YVPGWD
Sbjct: 36 VYQLRQKINEGKPTFILHDGPPYANGDIHMGHALNKISKDFIVRYKSMSGYRAPYVPGWD 95
Query: 67 CHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
HGLPIE L + K +S + R+ + +ALE ++ Q+ EF+ GV +W+ N Y T
Sbjct: 96 THGLPIEQQLTKMGYDRKKMSTTEFRQLCRKYALEQVDRQREEFKRLGVAGEWD-NPYLT 154
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
E+ ++ F + K+ IY+ KPV+WS SS +A+AE+E+EY D S S + K
Sbjct: 155 LKPEFEAQEIRVFGEMAKKGLIYKGKKPVFWSWSSESAMAEAEVEYH-DVTSPSAFYGEK 213
Query: 185 LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA--SVKGANVIVAKCLV 242
+ L T + ++WTTTPW++PA++ I + +YSV ++A LV
Sbjct: 214 VVDGKGILDNEVT--YLVVWTTTPWTIPASEGITVDANFDYSVVKHDEDERQFVIATELV 271
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
F DI+ V G L + HP E++ + +L FV+ GTGLVH AP
Sbjct: 272 SEAAEKFGWKDIQTVKTLKGSQLDRVLCQHPFYPERKLVTML-GNFVTLEAGTGLVHTAP 330
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVL--HLVEPDVLW 359
G DD+ + + + VL + ++G + +AG EG + D +Q+ L E ++L
Sbjct: 331 GFGMDDWQVGMKYGLDVLVPVDDKGFMTAEAGKDFEG--VFYDDANQIALDKLKEQNLLL 388
Query: 360 TEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
Y+HSYP+DWRTKKPVI +A+ QWF ++IK E L
Sbjct: 389 DYMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIKDEIL 427
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILK 1167
+ ++G + +AG EG+ + + L E ++L Y+HSYP+DWRTKKPVI +
Sbjct: 351 VDDKGFMTAEAGKDFEGVFYDDANQIALDKLKEQNLLLDYMPYEHSYPFDWRTKKPVIFR 410
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++IK E L ++ V F P K+ L + I R W ISRQRVWGVP+P+FY
Sbjct: 411 ATPQWFASVDKIKDEILGAIDDVEFFPGWGKRRLYNMIKDRGDWVISRQRVWGVPLPIFY 470
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
DG+ II E I H L +++G D W+ + LL
Sbjct: 471 GEDGEAIITPET-INHVADLFEQYGSDVWFDREAKDLL 507
>gi|431536451|ref|ZP_19517411.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1731]
gi|430594938|gb|ELB32890.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1731]
Length = 932
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ I ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPIDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ I ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPIDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
I ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 IDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|425056575|ref|ZP_18460026.1| isoleucine--tRNA ligase [Enterococcus faecium 505]
gi|403031605|gb|EJY43205.1| isoleucine--tRNA ligase [Enterococcus faecium 505]
Length = 932
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 213/628 (33%), Positives = 331/628 (52%), Gaps = 67/628 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDID-----VVCDFPGQYLQDITYIHPINK 532
P Y + G +VAK L+E T QT+I V+ +F GQ ++ +T HP
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLE----TVQTEIGWENVTVLKEFAGQEMEYMTASHPFY- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
R+ ++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG
Sbjct: 302 -DRESLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PG 359
Query: 593 LEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ + L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 360 FEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFR 418
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
L +E+V++V K L + I R W ISRQR WGVP+P+FY +G+ II E
Sbjct: 419 QNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-T 477
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L EHG W+ ++LL + N TK DI+D+WFDSG S VL
Sbjct: 478 IEHVAKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVL 537
Query: 764 KDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ +P A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS
Sbjct: 538 RQRPELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKS 597
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN+I+ + + +G D+LR WV++ +
Sbjct: 598 LGNIIAPEKV-----------------------------IKQFGADILRLWVSS-VDYEA 627
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-F 933
V + +IL+ + +KIR+++R+LL + ++S R VD YM RL +
Sbjct: 628 DVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVI 687
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ + Y ++ + R ++NF+ +LS+FY KD +Y ++ + R +
Sbjct: 688 KEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQT 747
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQG 1021
L + + PI+PH AEE++S L +
Sbjct: 748 AVALTKLLTPIIPHTAEEIWSFLKEEEA 775
Score = 292 bits (747), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 238/398 (59%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NQIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+ +F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQREDFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQTEIGWENVTVLKEFAGQEMEYMTASHPFY--DRESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V++V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVDWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|270291450|ref|ZP_06197672.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
gi|270280296|gb|EFA26132.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
Length = 933
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 325/623 (52%), Gaps = 64/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+A+AE+E+EY D S S + +++ L + D + ++WTTTPW++PA++ I +
Sbjct: 191 SAMAEAEVEYH-DVTSPSAFYAERVSDGKGVLDQ---DTYFVVWTTTPWTIPASEGITID 246
Query: 478 PALEYSVASVKGAN---VIVAKCL---VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+YSV G + VI L E W D++ + GQ L++IT +HP +
Sbjct: 247 AGFDYSVVKPAGDDRKFVIATDRLSYATEQFGWQ---DVETIKTVRGQELENITALHPFD 303
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ R L ++ FV+ GTGLVH AP G+DDF + + + + ++G + +AGP
Sbjct: 304 SD-RKLVVMLGDFVTLDSGTGLVHTAPGFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGP 362
Query: 592 GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
EG+ D + L+ ++ +L +Y HSYP+DWRTKKP+I +A+ QWF ++I
Sbjct: 363 DFEGV-FYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPIIFRATPQWFASVDKI 421
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEAN 708
+ + L L++V F+PE +K L + I R W ISRQRVWGVP+P+FY D T I+N
Sbjct: 422 RDQILDALKDVKFLPEWGQKRLHNMIRDRGDWVISRQRVWGVPLPIFYAEDGTPIMNGET 481
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L ++HG D W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 482 IEHVAELFEKHGSDIWFEWDAKDLLPEGYTSEHSPNGTFTKETDIMDVWFDSGSSHQGVL 541
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA + +EG DQ GWF SSL+TSVA+ AP++ V GF +D +G KMSKS
Sbjct: 542 AKRDYLKYPADLTLEGSDQYRGWFNSSLITSVAMSGHAPYKQVISQGFTLDGQGHKMSKS 601
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I DI KK+ G +++R WV + S
Sbjct: 602 LGNTIVPADII---KKM--------------------------GAEIIRLWVLSIDSS-S 631
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV-----YMLKRLCEF 933
V + ++ D +KIR+++RYLL + +++ Y D+ YML R E
Sbjct: 632 DVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDPQANTVA-YADLQPEDRYMLVRFNEL 690
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y ++ + + L+N+++ +LSAFY KD +Y + + R S + I
Sbjct: 691 VKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFAKDVVYIEPEDSLKRRSMQTVFYQI 750
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + P++PH EE++ L
Sbjct: 751 LVGLTKLMTPVLPHTTEEIWQFL 773
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 230/398 (57%), Gaps = 21/398 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GHA+NKI KDI +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPSFVLHDGPPYANGNIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + RK +++AL+ ++ Q+ +F+ GV A+W+ N Y T
Sbjct: 99 LPIEQQLTKEGHDRKKMSTAEFRKLCRDYALKQVDKQREDFKRLGVAAEWD-NPYLTLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+ ++ F + + IYR KPV+WS SS +A+AE+E+EY D S S + +++
Sbjct: 158 SFEAEEIRTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEVEYH-DVTSPSAFYAERVSD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCL--- 241
L + D + ++WTTTPW++PA++ I + +YSV G + VI L
Sbjct: 217 GKGVLDQ---DTYFVVWTTTPWTIPASEGITIDAGFDYSVVKPAGDDRKFVIATDRLSYA 273
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E W D+E + GQ L++IT +HP + + R L ++ FV+ GTGLVH AP
Sbjct: 274 TEQFGW---QDVETIKTVRGQELENITALHPFDSD-RKLVVMLGDFVTLDSGTGLVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
G+DDF + + + + ++G + +AGP EG+ D + L+ ++ +L
Sbjct: 330 GFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALLK 388
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y HSYP+DWRTKKP+I +A+ QWF ++I+ + L
Sbjct: 389 QMDYTHSYPFDWRTKKPIIFRATPQWFASVDKIRDQIL 426
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 1167
+ ++G + +AGP EG+ + + L + L + +Y HSYP+DWRTKKP+I +
Sbjct: 350 VDDRGYLTAEAGPDFEGVFYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPIIFR 409
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++I+ + L L+ V F+PE +K L + I R W ISRQRVWGVP+P+FY
Sbjct: 410 ATPQWFASVDKIRDQILDALKDVKFLPEWGQKRLHNMIRDRGDWVISRQRVWGVPLPIFY 469
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+N I+H L ++HG D W+ + LL
Sbjct: 470 AEDGTPIMNGETIEHVAELFEKHGSDIWFEWDAKDLL 506
>gi|302391662|ref|YP_003827482.1| isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302203739|gb|ADL12417.1| Isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 927
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/585 (33%), Positives = 309/585 (52%), Gaps = 53/585 (9%)
Query: 453 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD-ID 511
A D + +IWTTTPW++P+N I +P +Y VA +G ++VAK LV+ + D +
Sbjct: 228 AEDSYVVIWTTTPWTIPSNMAITVHPDFDYVVAEAEGDLLVVAKELVDEMMEIVGIDEYE 287
Query: 512 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 571
+V + G L+ + HP R+ ++ V+ +GTG VH AP HG +D+++ +
Sbjct: 288 IVEEIEGDALEGLVTTHPFF--DRESPIIFGDHVTLEQGTGCVHTAPGHGHEDYVIGVEY 345
Query: 572 KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT--ENYQHSYPYDWR 629
+PV + N G ++ +AGP G+ D +V ++E D L + HSYP WR
Sbjct: 346 DLPVFAPMDNDGVFTEEAGP-FAGM-YYDDANIKVTDMLEDDDLLMNLDFIDHSYPNCWR 403
Query: 630 TKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVW 689
K P+I +A++QWF + IK +AL +++V++ PE ++ + + I R WCISRQ+ W
Sbjct: 404 CKNPIIFRATEQWFASVDAIKDDALETIKDVDWYPEWGEERMANMIEDRSDWCISRQKSW 463
Query: 690 GVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNV 742
GVPIP+FY D I + IK L E G + W+ + E++L
Sbjct: 464 GVPIPIFYCQDCGADIATDETIKAVKELFAEEGSNAWFEKTAEEILPAGFECPECGEIEF 523
Query: 743 TKSNDILDIWFDSGISWSHVLK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAP 797
K +DI+D+WFDSG S + VL+ ++PA +Y+EG DQ GWF SSLLTS+A K AP
Sbjct: 524 EKESDIMDVWFDSGSSHASVLEIREELERPADIYLEGTDQYRGWFNSSLLTSIAYKGEAP 583
Query: 798 FRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKK 857
++ V +GF VD G KMSKS GNV+S H++
Sbjct: 584 YKGVVTNGFTVDANGKKMSKSQGNVVSPHEV----------------------------- 614
Query: 858 LPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGS 917
+ YG D+LR WVA+ K+ V + IL + + ++IR++ RY+LG + N +
Sbjct: 615 IDQYGADILRLWVASSDFKE-DVRVSDKILQQNAEVYRRIRNTFRYILGNMDNFDPVENT 673
Query: 918 ISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRL 973
+ +D + L +L + + + Y E+ Y + + NF E+S+FY ++KDRL
Sbjct: 674 VEYDELLEIDKWALHKLQKLVDEITEAYEEYDYHKLYHKVHNFCATEMSSFYMDVLKDRL 733
Query: 974 YCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
Y + R + ++ I L++ ++P++ H AEE + HLP
Sbjct: 734 YTSVTDSTKRRAAQTAMYEILTTLIKVLSPVLVHTAEEAWQHLPE 778
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 230/401 (57%), Gaps = 14/401 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+E+Y + G +FILHDGPPYANG HIGHA+N++LKDI R LQG + Y+PG
Sbjct: 34 NEIYDEALKNREGAEKFILHDGPPYANGDIHIGHALNQVLKDILTRYKTLQGYQSPYIPG 93
Query: 65 WDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE K + K + LS ++R++ KN+AL+ I+ Q+ +F+ G +W+ N
Sbjct: 94 WDTHGLPIEHQITKELGDKIEELSTAELREECKNYALKYIDRQREQFKRLGAWGEWD-NP 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D EY Q+ F + K Y+ + +KPVYW P TALAE+E+EY+ + SIY+
Sbjct: 153 YVTLDPEYEAKQIEVFGEIIKNGYLSKGMKPVYWCPHCNTALAEAEVEYEE-ARAPSIYV 211
Query: 182 KIKLNQ--VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
K + + A D + +IWTTTPW++P+N I +P +Y VA +G ++VAK
Sbjct: 212 KFPVQEGITVGDTELTAEDSYVVIWTTTPWTIPSNMAITVHPDFDYVVAEAEGDLLVVAK 271
Query: 240 CLVESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
LV+ + D E+V + G L+ + HP R+ ++ V+ +GTG VH
Sbjct: 272 ELVDEMMEIVGIDEYEIVEEIEGDALEGLVTTHPFF--DRESPIIFGDHVTLEQGTGCVH 329
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG +D+++ + +PV + N G ++ +AGP G+ D +V ++E D L
Sbjct: 330 TAPGHGHEDYVIGVEYDLPVFAPMDNDGVFTEEAGP-FAGM-YYDDANIKVTDMLEDDDL 387
Query: 359 WT--ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP WR K P+I +A++QWF + IK +AL
Sbjct: 388 LMNLDFIDHSYPNCWRCKNPIIFRATEQWFASVDAIKDDAL 428
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT--ENYQHSYPYDWRTKKPVIL 1166
+ N G ++ +AGP G+ + +V ++E D L + HSYP WR K P+I
Sbjct: 353 MDNDGVFTEEAGP-FAGM-YYDDANIKVTDMLEDDDLLMNLDFIDHSYPNCWRCKNPIIF 410
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF + IK +AL ++ V++ PE ++ + + I R WCISRQ+ WGVPIP+F
Sbjct: 411 RATEQWFASVDAIKDDALETIKDVDWYPEWGEERMANMIEDRSDWCISRQKSWGVPIPIF 470
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y D I + IK L E G + W+ E++L
Sbjct: 471 YCQDCGADIATDETIKAVKELFAEEGSNAWFEKTAEEIL 509
>gi|427439868|ref|ZP_18924432.1| isoleucine--tRNA ligase [Pediococcus lolii NGRI 0510Q]
gi|425788000|dbj|GAC45220.1| isoleucine--tRNA ligase [Pediococcus lolii NGRI 0510Q]
Length = 936
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 325/623 (52%), Gaps = 64/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+A+AE+E+EY D S S + +++ L + D + ++WTTTPW++PA++ I +
Sbjct: 194 SAMAEAEVEYH-DVTSPSAFYAERVSDGKGVLDQ---DTYFVVWTTTPWTIPASEGITID 249
Query: 478 PALEYSVASVKGAN---VIVAKCL---VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+YSV G + VI L E W D++ + GQ L++IT +HP +
Sbjct: 250 AGFDYSVVKPAGDDRKFVIATDRLSYAAEQFGWQ---DVETIKTVRGQELENITALHPFD 306
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ R L ++ FV+ GTGLVH AP G+DDF + + + + ++G + +AGP
Sbjct: 307 SD-RKLVVMLGDFVTLDSGTGLVHTAPGFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGP 365
Query: 592 GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
EG+ D + L+ ++ +L +Y HSYP+DWRTKKP+I +A+ QWF ++I
Sbjct: 366 DFEGV-FYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPIIFRATPQWFASVDKI 424
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEAN 708
+ + L L++V F+PE +K L + I R W ISRQRVWGVP+P+FY D T I+N
Sbjct: 425 RDQILDALKDVKFLPEWGQKRLHNMIRDRGDWVISRQRVWGVPLPIFYAEDGTPIMNGET 484
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L ++HG D W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 485 IEHVAELFEKHGSDIWFEWDAKDLLPEGYTSEHSPNGTFTKETDIMDVWFDSGSSHQGVL 544
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA + +EG DQ GWF SSL+TSVA+ AP++ V GF +D +G KMSKS
Sbjct: 545 AKRDYLKYPADLTLEGSDQYRGWFNSSLITSVAMSGHAPYKQVISQGFTLDGQGHKMSKS 604
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I DI KK+ G +++R WV + S
Sbjct: 605 LGNTIVPADII---KKM--------------------------GAEIIRLWVLSIDSS-S 634
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV-----YMLKRLCEF 933
V + ++ D +KIR+++RYLL + +++ Y D+ YML R E
Sbjct: 635 DVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDPQANTVA-YADLQPEDRYMLVRFNEL 693
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y ++ + + L+N+++ +LSAFY KD +Y + + R S + I
Sbjct: 694 VKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFAKDVVYIEPEDSLKRRSMQTVFYQI 753
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + P++PH EE++ L
Sbjct: 754 LVGLTKLMTPVLPHTTEEIWQFL 776
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 230/398 (57%), Gaps = 21/398 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GHA+NKI KDI +R + G R YVPGWD HG
Sbjct: 42 QRQKLNEGKPSFVLHDGPPYANGNIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHG 101
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + RK +++AL+ ++ Q+ +F+ GV A+W+ N Y T
Sbjct: 102 LPIEQQLTKEGHDRKKMSTAEFRKLCRDYALKQVDKQREDFKRLGVAAEWD-NPYLTLQP 160
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+ ++ F + + IYR KPV+WS SS +A+AE+E+EY D S S + +++
Sbjct: 161 SFEAEEIRTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEVEYH-DVTSPSAFYAERVSD 219
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCL--- 241
L + D + ++WTTTPW++PA++ I + +YSV G + VI L
Sbjct: 220 GKGVLDQ---DTYFVVWTTTPWTIPASEGITIDAGFDYSVVKPAGDDRKFVIATDRLSYA 276
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E W D+E + GQ L++IT +HP + + R L ++ FV+ GTGLVH AP
Sbjct: 277 AEQFGW---QDVETIKTVRGQELENITALHPFDSD-RKLVVMLGDFVTLDSGTGLVHTAP 332
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
G+DDF + + + + ++G + +AGP EG+ D + L+ ++ +L
Sbjct: 333 GFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALLK 391
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y HSYP+DWRTKKP+I +A+ QWF ++I+ + L
Sbjct: 392 QMDYTHSYPFDWRTKKPIIFRATPQWFASVDKIRDQIL 429
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 1167
+ ++G + +AGP EG+ + + L + L + +Y HSYP+DWRTKKP+I +
Sbjct: 353 VDDRGYLTAEAGPDFEGVFYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPIIFR 412
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++I+ + L L+ V F+PE +K L + I R W ISRQRVWGVP+P+FY
Sbjct: 413 ATPQWFASVDKIRDQILDALKDVKFLPEWGQKRLHNMIRDRGDWVISRQRVWGVPLPIFY 472
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+N I+H L ++HG D W+ + LL
Sbjct: 473 AEDGTPIMNGETIEHVAELFEKHGSDIWFEWDAKDLL 509
>gi|333394734|ref|ZP_08476553.1| isoleucyl-tRNA synthetase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 930
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 217/621 (34%), Positives = 324/621 (52%), Gaps = 61/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+ELEYK D S S Y ++ L TD + ++WTTTPW++PA++ I
Sbjct: 191 SALAEAELEYK-DIESPSAYYGEQVKDGKGIL---DTDTYFVVWTTTPWTIPASEGIVVE 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+YSV G + +VA L+ L K +Q D+ V+ GQ ++ +T HP +E
Sbjct: 247 AEYDYSVVQPAGEDRKFVVASELINTLAEKAGWQ-DVKVLKTLKGQDMEYMTAQHPFYQE 305
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+L ++ +V+ GTGLVH AP G DDF + + +L+ + +QG+ + D PG
Sbjct: 306 -RELLVMLGDYVTLDSGTGLVHTAPGLGDDDFKVGKKYGLDILSPVDDQGRLT-DEAPGF 363
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EGL D + VE +L E Y HSYP DWRTKKPVI +++ QWF + +
Sbjct: 364 EGL-FYEDANKLSIKKVEDAGLMLKQEPYLHSYPMDWRTKKPVIFRSTPQWFASVDAFRD 422
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
+ LA +E+V+F P+ K L + I R W ISRQRVWGVP+P+FY DG+ II E I
Sbjct: 423 QILAAIEKVSFTPDWGKTRLYNMIRDRGDWVISRQRVWGVPLPIFYGEDGEAIITPE-TI 481
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L +HG W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 482 DHVADLFAKHGSSVWFDREAKDLLPEGFTSEHSPNGQFTKETDIMDVWFDSGSSHQGVLA 541
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + GF +D+ G KMSKS+
Sbjct: 542 ERDYLTYPADLYLEGSDQYRGWFNSSLITSVAVSGEAPYKQILSQGFTMDKDGHKMSKSL 601
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ +K + G ++LR WVA S
Sbjct: 602 GNTIAP-----------------------------SKIIKQMGAEILRLWVATVDSS-AD 631
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + D +KIR++LR+LL + +T ++ + VD Y++ RL + +
Sbjct: 632 VRVSMEGFKQVSDSYRKIRNTLRFLLANTTDFDPATDALDYSELQSVDKYLMIRLNQVKA 691
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y ++ +A + + NF+ +LSAFY KD +Y ++ + R + ++N+
Sbjct: 692 ASLAAYNKYDFATVYKQISNFITVDLSAFYLDFAKDIVYIEAADDPKRRAMQTVMYNVLV 751
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EEV+ L
Sbjct: 752 DLTKLLTPILPHTTEEVWGFL 772
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 231/398 (58%), Gaps = 18/398 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KDI +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPTFVLHDGPPYANGNIHIGHALNKISKDIIVRFKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + R +ALE ++ Q+ +F+ GV ADW+ Y T
Sbjct: 99 LPIEQQLTKQGYDRKKMSISEFRALCHKYALEQVDKQRTDFKRLGVSADWDR-PYLTLAP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ +++ F + K+ YIYR KP++WSPSS +ALAE+ELEYK D S S Y ++
Sbjct: 158 EFEAHEVRVFGEMAKKGYIYRGNKPIHWSPSSESALAEAELEYK-DIESPSAYYGEQVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESL 245
L TD + ++WTTTPW++PA++ I +YSV G + +VA L+ +L
Sbjct: 217 GKGIL---DTDTYFVVWTTTPWTIPASEGIVVEAEYDYSVVQPAGEDRKFVVASELINTL 273
Query: 246 --KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
K +Q D++V+ GQ ++ +T HP +E R+L ++ +V+ GTGLVH AP
Sbjct: 274 AEKAGWQ-DVKVLKTLKGQDMEYMTAQHPFYQE-RELLVMLGDYVTLDSGTGLVHTAPGL 331
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
G DDF + + +L+ + +QG+ + D PG EGL D + VE +L E
Sbjct: 332 GDDDFKVGKKYGLDILSPVDDQGRLT-DEAPGFEGL-FYEDANKLSIKKVEDAGLMLKQE 389
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
Y HSYP DWRTKKPVI +++ QWF + + + L
Sbjct: 390 PYLHSYPMDWRTKKPVIFRSTPQWFASVDAFRDQILAA 427
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPV 1164
L+ + +QG+ + D PG EGL K + + + +L E Y HSYP DWRTKKPV
Sbjct: 347 LSPVDDQGRLT-DEAPGFEGLFYEDANKLSIKKVEDAGLMLKQEPYLHSYPMDWRTKKPV 405
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +++ QWF + + + LA +E V+F P+ K L + I R W ISRQRVWGVP+P
Sbjct: 406 IFRSTPQWFASVDAFRDQILAAIEKVSFTPDWGKTRLYNMIRDRGDWVISRQRVWGVPLP 465
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG+ II E I H L +HG W+ + LL
Sbjct: 466 IFYGEDGEAIITPE-TIDHVADLFAKHGSSVWFDREAKDLL 505
>gi|457094973|gb|EMG25468.1| Isoleucyl-tRNA synthetase [Streptococcus parauberis KRS-02083]
Length = 931
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 214/645 (33%), Positives = 326/645 (50%), Gaps = 64/645 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGKL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGANV--IVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P ++Y G++ +VA+ L+E+L F + +V+ F G L+ I HP + E
Sbjct: 247 PDMDYVQVKPAGSDCKYLVAEGLLESLSNKFGWPEFEVLNSFKGSELEYIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V+ GTG+VH AP G+DD+ + K+ V + +G +AGP +
Sbjct: 307 DELVIL-GDHVTLESGTGIVHTAPGFGEDDYNVGSKYKLEVAVTVDERGIMMENAGPDFQ 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V +V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 366 G-----QFYDKVTPIVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSDFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+VNF P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKVNFHPSWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L ++ G WW ++LL + N TK DI+D+WFDSG SW+ V+
Sbjct: 481 -DHIANLFEQEGSIIWWKKEAKELLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVM 539
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
D PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARGHLDYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKEVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
GN I D+T+ YG ++LR WV + D
Sbjct: 600 KGNTILPSDVTK-----------------------------QYGAEILRLWVTS-VDTDN 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + +IL + +KIR++LR+L+ + + +T +++ VD YM + +
Sbjct: 630 DVRVSMDILGQVSETYRKIRNTLRFLIANTSDFNPNTDAVAYENLSAVDKYMTIKFNKLV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
++T Y + + + ++NFV +LSAFY KD +Y + N R ++I
Sbjct: 690 ELINTSYASYDFMAIYKAVVNFVTIDLSAFYLDFAKDVVYIEGANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSI 1039
+ + + PI+PH AEE++S+L F + Y G +
Sbjct: 750 VKITKLLTPILPHTAEEIWSYLEFESEEFVQLSELPLAESYEGEV 794
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 225/402 (55%), Gaps = 20/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ LY ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G + +VPG
Sbjct: 34 ANLYKKRQELNEGKPSFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPFVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + + + + +AL ++ Q+ +F+ GV ADWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEMDLAEYLEMCRTYALSQVDKQREDFKRLGVSADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 VTLMPQYEADQIRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV--IVAKC 240
K+ L TD + ++WTTTP+++ A++ + P ++Y G++ +VA+
Sbjct: 212 NKVKDGKGKL---DTDTYIVVWTTTPFTVTASRGLTVGPDMDYVQVKPAGSDCKYLVAEG 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ESL F + EV+ F G L+ I HP + E +L +L V+ GTG+VH
Sbjct: 269 LLESLSNKFGWPEFEVLNSFKGSELEYIVTEHPWDTEVDELVIL-GDHVTLESGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--- 356
AP G+DD+ + K+ V + +G +AGP + G D+V +V+
Sbjct: 328 APGFGEDDYNVGSKYKLEVAVTVDERGIMMENAGPDFQ-----GQFYDKVTPIVKEKLGD 382
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + E L
Sbjct: 383 LLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSDFRQEIL 424
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP +G + D+V +V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDERGIMMENAGPDFQG-----QFYDKVTPIVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + E L +E VNF P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSDFRQEILDEIEKVNFHPSWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L ++ G WW ++LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHIANLFEQEGSIIWWKKEAKELL 504
>gi|283770255|ref|ZP_06343147.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
gi|283460402|gb|EFC07492.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
Length = 917
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 321/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATSQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAIDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 270 bits (689), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATSQWFASISKVRQDIL 424
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATSQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAIDLL 504
>gi|418069447|ref|ZP_12706725.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
gi|357536916|gb|EHJ20944.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
Length = 933
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 325/623 (52%), Gaps = 64/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+A+AE+E+EY D S S + +++ L + D + ++WTTTPW++PA++ I +
Sbjct: 191 SAMAEAEVEYH-DVTSPSAFYAERVSDGKGVLDQ---DTYFVVWTTTPWTIPASEGITID 246
Query: 478 PALEYSVASVKGAN---VIVAKCL---VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+YSV G + VI L E W D++ + GQ L++IT +HP +
Sbjct: 247 AGFDYSVVKPAGDDRKFVIATDRLSYATEQFGWQ---DVETIKTVRGQELENITALHPFD 303
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ R L ++ FV+ GTGLVH AP G+DDF + + + + ++G + +AGP
Sbjct: 304 SD-RKLVVMLGDFVTLDSGTGLVHTAPGFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGP 362
Query: 592 GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
EG+ D + L+ ++ +L +Y HSYP+DWRTKKP+I +A+ QWF ++I
Sbjct: 363 DFEGV-FYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPIIFRATPQWFASVDKI 421
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEAN 708
+ + L L++V F+PE +K L + I R W ISRQRVWGVP+P+FY D T I+N
Sbjct: 422 RDQILDALKDVKFLPEWGQKRLHNMIRDRGDWVISRQRVWGVPLPIFYAEDGTPIMNGET 481
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L ++HG D W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 482 IEHVAELFEKHGSDIWFEWDAKDLLPEGYTSEHSPNGTFTKETDIMDVWFDSGSSHQGVL 541
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA + +EG DQ GWF SSL+TSVA+ AP++ V GF +D +G KMSKS
Sbjct: 542 AKRDYLKYPADLTLEGSDQYRGWFNSSLITSVAMSGHAPYKQVISQGFTLDGQGHKMSKS 601
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I DI KK+ G +++R WV + S
Sbjct: 602 LGNTIVPADII---KKM--------------------------GAEIIRLWVLSIDSS-S 631
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV-----YMLKRLCEF 933
V + ++ D +KIR+++RYLL + +++ Y D+ YML R E
Sbjct: 632 DVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDPQANTVA-YADLQPEDRYMLVRFNEL 690
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y ++ + + L+N+++ +LSAFY KD +Y + + R S + I
Sbjct: 691 VKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFAKDVVYIEPEDSLKRRSMQTVFYQI 750
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + P++PH EE++ L
Sbjct: 751 LVGLTKLMTPVLPHTTEEIWQFL 773
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 230/398 (57%), Gaps = 21/398 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GHA+NKI KDI +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPSFVLHDGPPYANGNIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + RK +++AL+ ++ Q+ +F+ GV A+W+ N Y T
Sbjct: 99 LPIEQQLTKEGHDRKKMSTAEFRKLCRDYALKQVDKQREDFKRLGVAAEWD-NPYLTLQP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+ ++ F + + IYR KPV+WS SS +A+AE+E+EY D S S + +++
Sbjct: 158 SFEAEEIRTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEVEYH-DVTSPSAFYAERVSD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCL--- 241
L + D + ++WTTTPW++PA++ I + +YSV G + VI L
Sbjct: 217 GKGVLDQ---DTYFVVWTTTPWTIPASEGITIDAGFDYSVVKPAGDDRKFVIATDRLSYA 273
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E W D+E + GQ L++IT +HP + + R L ++ FV+ GTGLVH AP
Sbjct: 274 TEQFGW---QDVETIKTVRGQELENITALHPFDSD-RKLVVMLGDFVTLDSGTGLVHTAP 329
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
G+DDF + + + + ++G + +AGP EG+ D + L+ ++ +L
Sbjct: 330 GFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALLK 388
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y HSYP+DWRTKKP+I +A+ QWF ++I+ + L
Sbjct: 389 QMDYTHSYPFDWRTKKPIIFRATPQWFASVDKIRDQIL 426
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 1167
+ ++G + +AGP EG+ + + L + L + +Y HSYP+DWRTKKP+I +
Sbjct: 350 VDDRGYLTAEAGPDFEGVFYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPIIFR 409
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++I+ + L L+ V F+PE +K L + I R W ISRQRVWGVP+P+FY
Sbjct: 410 ATPQWFASVDKIRDQILDALKDVKFLPEWGQKRLHNMIRDRGDWVISRQRVWGVPLPIFY 469
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+N I+H L ++HG D W+ + LL
Sbjct: 470 AEDGTPIMNGETIEHVAELFEKHGSDIWFEWDAKDLL 506
>gi|386728872|ref|YP_006195255.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 71193]
gi|418978565|ref|ZP_13526365.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus DR10]
gi|379993389|gb|EIA14835.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus DR10]
gi|384230165|gb|AFH69412.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 71193]
Length = 920
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 194 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 247
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 248 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 305
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 306 -LDRESLVINGYHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 364
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 365 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 423
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 424 HDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 483
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 484 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 543
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 544 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 603
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 604 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 633
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 634 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 693
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 694 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 753
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 754 DMTKLLAPILVHTAEEVWSHTP 775
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 45 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 104
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 105 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 162
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 163 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 220
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 221 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 276
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 277 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGYHVTTDAGTGCVHTAPGH 333
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 334 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 392
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 393 ITHSYPHDWRTKKPVIFRATPQWFASISKVRHDIL 427
Score = 109 bits (273), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 352 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 410
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 411 ATPQWFASISKVRHDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 470
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 471 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 507
>gi|387602466|ref|YP_005733987.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
gi|404478531|ref|YP_006709961.1| isoleucyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
gi|418309750|ref|ZP_12921301.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
gi|283470404|emb|CAQ49615.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
gi|365237873|gb|EHM78712.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
gi|404440020|gb|AFR73213.1| isoleucyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
Length = 917
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGYHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 HDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGYHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRHDIL 424
Score = 109 bits (273), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRHDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|418900600|ref|ZP_13454657.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1214]
gi|418916988|ref|ZP_13470947.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1267]
gi|418982106|ref|ZP_13529814.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377703068|gb|EHT27384.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1214]
gi|377704387|gb|EHT28696.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377750162|gb|EHT74100.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIG1267]
Length = 917
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 321/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFNVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGF +D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFFMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFNVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|227893344|ref|ZP_04011149.1| isoleucyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
gi|227864759|gb|EEJ72180.1| isoleucyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
Length = 929
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 324/621 (52%), Gaps = 63/621 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + + D + +IWTTTPW++PAN+ I N
Sbjct: 193 STLAEAEVEYK-DVEANSIFVAFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVN 249
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P +YSV V +VA L+ E + W D VV G+ ++ + HPI +
Sbjct: 250 PKFDYSVVQVGDKRYVVATGLLDKVAEEIGWD---DYKVVQTVKGKDMEYMKAKHPIYDK 306
Query: 534 QRDLKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
L+ GF V+ GTGLVH AP G+DDF + +P+ + + G Y+ D P
Sbjct: 307 D---SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQKYHLPIFSPVDAHGCYT-DEVPE 362
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L+G+ K + L + L + + HSYP+DWRTKKPVI +A+ QWF ++ +
Sbjct: 363 LKGMFYQDVDKLMIQKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIDKFRD 422
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIK 710
+ L + + +F+P K L + I R W ISRQR WGVP+P+FY D T IV I
Sbjct: 423 QILDQINKASFIPSWGKTRLYNMIKDRSDWVISRQRAWGVPLPIFYAEDGTPIVTPETID 482
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H + ++ G + W++ + ++LL + N TK DILD+WFDSG SWS V++
Sbjct: 483 HIAKIFEKEGSNAWYTHTAKELLPDGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEK 542
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+G
Sbjct: 543 RDGLQYPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLG 602
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPT 879
NVI S +D+ + G +++R WVA A + D
Sbjct: 603 NVI-----------------------SPNDV------IKRMGAEIIRLWVAQADTTSDVA 633
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V +G IL S + +KIR++ RY+L + ++ R VD Y+ +L +
Sbjct: 634 VSMG--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYNDLRSVDQYVEVKLNDLVK 691
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y +F + + + NF+ N+LSAFY KD LY +S + AR S +++
Sbjct: 692 DCLAAYDKFDFTTVFKKVFNFISNDLSAFYLDFAKDVLYIESKDSHARRSMQTVIYDAAV 751
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EE++ L
Sbjct: 752 KLDKVLTPILPHTMEEIWGFL 772
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 223/402 (55%), Gaps = 21/402 (5%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN G P F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 36 NDLYE-QRLKLNEGHPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMSGYYAPYVP 94
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E I Q +F+ GV+ADW+H
Sbjct: 95 GWDTHGLPVEQQLAKKGVDRKTMDRAKYRELCRQYAEEQIQKQMKDFKRLGVMADWDH-P 153
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F +YK+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 154 YITLQHDFEAQEIRVFGEMYKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 212
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + D + +IWTTTPW++PAN+ I NP +YSV V +VA L
Sbjct: 213 AFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKRYVVATGL 270
Query: 242 V----ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGL 296
+ E + W D +VV G+ ++ + HPI + L+ GF V+ GTGL
Sbjct: 271 LDKVAEEIGW---DDYKVVQTVKGKDMEYMKAKHPIYDKD---SLVIEGFHVTLDDGTGL 324
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP G+DDF + +P+ + + G Y+ D P L+G+ K + L +
Sbjct: 325 VHTAPGFGEDDFNVGQKYHLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMIQKLKDAG 383
Query: 357 VLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + + HSYP+DWRTKKPVI +A+ QWF ++ + + L
Sbjct: 384 ALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASIDKFRDQIL 425
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF ++ + + L + +F+P K L + I R
Sbjct: 391 FTHSYPHDWRTKKPVIFRATTQWFASIDKFRDQILDQINKASFIPSWGKTRLYNMIKDRS 450
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I H + ++ G + W++ ++LL
Sbjct: 451 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIDHIAKIFEKEGSNAWYTHTAKELL 505
>gi|404495208|ref|YP_006719314.1| isoleucyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418065674|ref|ZP_12703045.1| isoleucyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|78192827|gb|ABB30594.1| isoleucyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373561754|gb|EHP87980.1| isoleucyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 923
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/633 (34%), Positives = 329/633 (51%), Gaps = 76/633 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLN-----QVPAHLLEGATDLHALIWTTTPWSLPANQ 472
TALAE+E+EY D S SIY+K L VPA L G + +IWTTTPW++PAN
Sbjct: 192 TALAEAEVEYA-DKTSPSIYVKFLLQDDISASVPA--LAG-KKVSLVIWTTTPWTIPANL 247
Query: 473 FIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINK 532
+A +P LEY G ++VA+ L + V+ F L HP
Sbjct: 248 AVALHPELEYVALEAGGEVLVVAEGLKDAFMAATGVQGSVIATFRADILYRKRCKHPFY- 306
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
RD +L V+ GTG VH AP HGQ+D+ LAL E + + N + N+G+Y
Sbjct: 307 -DRDSIVLLGEHVTLDAGTGCVHTAPGHGQEDYELALVEGLDIYNPVDNRGRY------- 358
Query: 593 LEGLNILG-----DGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFID 645
++ L G D V+ ++ ++ + +HSYP+ WR KKP+I +A++QWFI
Sbjct: 359 IQSLEFFGGQFVFDANATVIEKLQEVGALVGQGSVEHSYPHCWRCKKPIIFRATEQWFIS 418
Query: 646 TER--IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDT 701
E+ ++ +AL ++ V++VP+ ++ + I RP WCISRQR WGVPI FY +
Sbjct: 419 MEKNDLRKKALEEIDRVSWVPKWGRERIHGMIENRPDWCISRQRSWGVPITAFYCTECGE 478
Query: 702 IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSG 756
I+ + + H L E G D W+ +LL V S K DILD+WFDSG
Sbjct: 479 ILADGTIMHHVADLFMEGGADLWYEKEAAELLPPGTVCPQCGKSAFEKEMDILDVWFDSG 538
Query: 757 ISWSHVLKDKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEK 811
+S + VL+++P A++Y+EG DQ GWF SSLL SV + TAP++ V HGFVVD
Sbjct: 539 VSHAAVLENRPELGSPANMYLEGSDQHRGWFHSSLLASVGTRGTAPYKEVLTHGFVVDGS 598
Query: 812 GAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA 871
G KMSKSVGNV++ ++ + YG ++LR WVA
Sbjct: 599 GRKMSKSVGNVVAPEEV-----------------------------IKKYGAEILRLWVA 629
Query: 872 AHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSEST-----GSISRYVDVYM 926
A +D V I + IL + ++IR++ RYLLG L++ +T G ++ +D +
Sbjct: 630 AQDYRD-DVRISQEILTRLAEAYRRIRNTCRYLLGNLYDFDPATDMVPFGEMTE-LDRWA 687
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L +L + + T Y E+++ + F E+SAFY ++K+R Y + R S
Sbjct: 688 LHQLEVLKEKVFTAYNEYEFHILYHAVNGFCTVEMSAFYLDIIKER-YTSRKDSPERRSA 746
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
++ + L+R +AP++ A+EV+ ++P R
Sbjct: 747 QTVMYLVLESLVRLMAPVLSFTADEVWGYMPKR 779
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 219/402 (54%), Gaps = 29/402 (7%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY A GKP ++LHDGPPYANG HIGHA+NKILKDI L+S +QG YVPG
Sbjct: 34 NDLYGKLTAAGEGKPRYVLHDGPPYANGHIHIGHALNKILKDIILKSKRMQGFDAPYVPG 93
Query: 65 WDCHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WDCHGLPIEL K + SK + L +RK+ + +A + + Q+ EFE GV+ DW+
Sbjct: 94 WDCHGLPIELQVEKNLGSKKHETTKLQMRKQCREYAEKFVKIQRDEFERLGVIGDWDRP- 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T +Y + +Y+ KPV+W S TALAE+E+EY D S SIY+
Sbjct: 153 YLTMTHDYEGITARELARFAANGGLYKGKKPVHWCSSCVTALAEAEVEY-ADKTSPSIYV 211
Query: 182 KIKLN-----QVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVI 236
K L VPA L G + +IWTTTPW++PAN +A +P LEY G ++
Sbjct: 212 KFLLQDDISASVPA--LAG-KKVSLVIWTTTPWTIPANLAVALHPELEYVALEAGGEVLV 268
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
VA+ L ++ V+ F L HP RD +L V+ GTG
Sbjct: 269 VAEGLKDAFMAATGVQGSVIATFRADILYRKRCKHPFY--DRDSIVLLGEHVTLDAGTGC 326
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILG-----DGKDQVLH 351
VH AP HGQ+D+ LAL E + + N + N+G+Y ++ L G D V+
Sbjct: 327 VHTAPGHGQEDYELALVEGLDIYNPVDNRGRY-------IQSLEFFGGQFVFDANATVIE 379
Query: 352 LVEP--DVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
++ ++ + +HSYP+ WR KKP+I +A++QWFI E+
Sbjct: 380 KLQEVGALVGQGSVEHSYPHCWRCKKPIIFRATEQWFISMEK 421
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 1151 QHSYPYDWRTKKPVILKASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQR 1208
+HSYP+ WR KKP+I +A++QWFI E+ ++ +AL ++ V++VP+ ++ + I R
Sbjct: 394 EHSYPHCWRCKKPIIFRATEQWFISMEKNDLRKKALEEIDRVSWVPKWGRERIHGMIENR 453
Query: 1209 PYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
P WCISRQR WGVPI FY + I+ + + H L E G D W+ +LL
Sbjct: 454 PDWCISRQRSWGVPITAFYCTECGEILADGTIMHHVADLFMEGGADLWYEKEAAELLPPG 513
Query: 1267 DVNSNVTKS 1275
V KS
Sbjct: 514 TVCPQCGKS 522
>gi|390599465|gb|EIN08861.1| isoleucyl-tRNA synthetase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1024
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 220/652 (33%), Positives = 332/652 (50%), Gaps = 82/652 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKL----NQVPAHLLE-----GATDLHALIWTTTPWSL 468
+ALAE+ELEY D IS S+Y+ + VP L E + AL+WTTTPW+L
Sbjct: 230 SALAEAELEYD-DIISHSVYVSFTVPASAGSVPPLLRELMAREKVDSIGALVWTTTPWTL 288
Query: 469 PANQFIAFNPALEYSVASVK--GANVIVAKCLVENLKWTFQTDI----DVVCDFPGQYLQ 522
AN IA N + Y+V K G ++VAK + L+ + DI V+ D PG+ L
Sbjct: 289 TANMGIAVNEGMTYTVLRQKKTGQLLLVAKDRLSALE---KDDILGHTVVLADIPGKDLV 345
Query: 523 DITYIHPINKEQRDL-KLLPAGFVSSSKGTGLVHCAPAHGQDDFLL-----ALAEKIPVL 576
+TY + Q + K+ P+ VS + GTG VHCAPAHG +D+ L L +L
Sbjct: 346 GVTYKPLFGRSQPFVYKIHPSAHVSPNTGTGFVHCAPAHGMEDYHLFRSLNLLPRHSGML 405
Query: 577 NLITNQGKYSPD--------AGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDW 628
+ GK+SP+ AG L GL +L DG V+ ++ ++W +H YP DW
Sbjct: 406 CHVDALGKFSPEVVDVVGHEAGRSLVGLQVLRDGGRVVIDILGDKIVWNGKLKHRYPIDW 465
Query: 629 RTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRV 688
+TK+PVI+ A++QWF + IK A+ L++V+F P ++ L + R WCISRQRV
Sbjct: 466 KTKEPVIIMATEQWFANLNNIKDAAVTALKDVDFYPTVSRNRLESFVNTRSEWCISRQRV 525
Query: 689 WGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV-TKS 745
WG+PIP Y+ T ++ E +++H ++ID G WW VE + S K
Sbjct: 526 WGMPIPALYNDQTGETLLTEQSLEHILSVIDNKGIQHWWDGPVEDFVPLSRAGEKGWRKG 585
Query: 746 NDILDIWFDSGISWSHV-----LKDKPAHVYMEGMDQINGWFMSSLLTSVALKH------ 794
+ +D+WFDSG SWS + + A V +EG DQ GWF S LLT VA+
Sbjct: 586 TETMDVWFDSGSSWSMLEGLGESRQHLADVCVEGSDQHRGWFQSQLLTKVAVSQWHGTET 645
Query: 795 -TAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQ 853
AP+ + HG V+D++G KMSK++GN++S + G K
Sbjct: 646 SVAPYGTLITHGMVLDQEGKKMSKTLGNIVSPMVVVNGGKD------------------- 686
Query: 854 GAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHN--- 910
KK PAYG D LR W AA +G +L + + ++KIR++ R++LG ++N
Sbjct: 687 -KKKEPAYGADALRLW-AATVEYWRDAALGPTVLAQAAESLRKIRNTARFILGNVYNGFG 744
Query: 911 ------HSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAF 964
+ G RYV + L + + Y + + +A L NF +S+
Sbjct: 745 GEWERVERKDLGLAERYV----MYELYKVEQAAMEGYASYNFPKAVNALSNFANITMSSL 800
Query: 965 YFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHL 1016
YF + KD LY + ++R + L + + + VAP++PHLAEE+++++
Sbjct: 801 YFDITKDCLYAEKPESQSRRAVATVLEQVLKSMTKAVAPVLPHLAEEIHANI 852
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 180/428 (42%), Positives = 250/428 (58%), Gaps = 39/428 (9%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY WQ E G P F+LHDGPPYANG H+GHA+NKILKDI R ++L G RVHYVPGW
Sbjct: 71 DLYRWQWENAKG-PLFVLHDGPPYANGDLHMGHALNKILKDIINRYHVLLGHRVHYVPGW 129
Query: 66 DCHGLPIELKAIT--SKDKL-LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH--N 120
DCHGLPIE KA+ KD L L P +R +A +A + + Q+ EF+ G++ADW++ +
Sbjct: 130 DCHGLPIENKALKRLRKDPLKLPPGVVRAEALKYAHKEVEKQREEFKQLGIMADWDNPSS 189
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T D +Y+ QL F + I+R +PVY+SPSSR+ALAE+ELEY D +S S+Y
Sbjct: 190 TYRTIDHDYMLRQLRIFQRMIGAGLIHRAHRPVYYSPSSRSALAEAELEYD-DIISHSVY 248
Query: 181 LKIKL----NQVPAHL-----LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK 231
+ + VP L E + AL+WTTTPW+L AN IA N + Y+V K
Sbjct: 249 VSFTVPASAGSVPPLLRELMAREKVDSIGALVWTTTPWTLTANMGIAVNEGMTYTVLRQK 308
Query: 232 --GANVIVAKCLVESLKWTFQTDI----EVVCDFPGQYLQDITYIHPINKEQRDL-KLLP 284
G ++VAK + +L+ + DI V+ D PG+ L +TY + Q + K+ P
Sbjct: 309 KTGQLLLVAKDRLSALE---KDDILGHTVVLADIPGKDLVGVTYKPLFGRSQPFVYKIHP 365
Query: 285 AGFVSSSKGTGLVHCAPAHGQDDFLL-----ALAEKIPVLNLITNQGKYSP--------D 331
+ VS + GTG VHCAPAHG +D+ L L +L + GK+SP +
Sbjct: 366 SAHVSPNTGTGFVHCAPAHGMEDYHLFRSLNLLPRHSGMLCHVDALGKFSPEVVDVVGHE 425
Query: 332 AGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
AG L GL +L DG V+ ++ ++W +H YP DW+TK+PVI+ A++QWF +
Sbjct: 426 AGRSLVGLQVLRDGGRVVIDILGDKIVWNGKLKHRYPIDWKTKEPVIIMATEQWFANLNN 485
Query: 392 IKPEALVC 399
IK A+
Sbjct: 486 IKDAAVTA 493
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 10/164 (6%)
Query: 1113 GKYSPD--------AGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
GK+SP+ AG L GL +L +G V+ ++ ++W +H YP DW+TK+PV
Sbjct: 412 GKFSPEVVDVVGHEAGRSLVGLQVLRDGGRVVIDILGDKIVWNGKLKHRYPIDWKTKEPV 471
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I+ A++QWF + IK A+ L+ V+F P ++ L + R WCISRQRVWG+PIP
Sbjct: 472 IIMATEQWFANLNNIKDAAVTALKDVDFYPTVSRNRLESFVNTRSEWCISRQRVWGMPIP 531
Query: 1225 VFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
Y+ T ++ E +++H ++ID G WW PVE + S
Sbjct: 532 ALYNDQTGETLLTEQSLEHILSVIDNKGIQHWWDGPVEDFVPLS 575
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 1015 HLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAP 1074
+ P S+F + + Y I K LY + ++R + L + + + VAP
Sbjct: 781 NFPKAVNALSNFANITMSSLYF-DITKDCLYAEKPESQSRRAVATVLEQVLKSMTKAVAP 839
Query: 1075 IMPHLAEEVYSHLPS--RQGTFSSFCHFKVYHHLNLITNQGKYSPDAGPGLEGLNILGEG 1132
++PHLAEE+++++ + R G + V+ + + P A E +N+L
Sbjct: 840 VLPHLAEEIHANIANLERVGKAAYPSFQSVFMEPWVPLSVEWRDPQAE---EDMNVLLRA 896
Query: 1133 KDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNF 1192
+ +VL L+E ++ ++S + P + ++ +D R + E L L V+
Sbjct: 897 RSEVLLLLE-KARGEKHLRNSLEAEVDVVLPDVPSSNISELVDVLRRESEYLKTLFIVSD 955
Query: 1193 VPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVN-EANIKHFCTLIDEHGP 1251
V + K SL P W ++ G P D+I++ + KH C P
Sbjct: 956 VTVTDKASLG---VSEPTWIVT-----GTIPPTDSKTDSILLRVRPSSKHKC-------P 1000
Query: 1252 DFW-WSLPVEQLL 1263
W ++ P E LL
Sbjct: 1001 RCWTYTRPAEDLL 1013
>gi|350646419|emb|CCD58916.1| isoleucine--tRNA ligase [Schistosoma mansoni]
Length = 1027
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 341/651 (52%), Gaps = 84/651 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
+A+AESELEY +H S S+YLK+ L + HL + ++++A+IWTT PW++ +N+ +
Sbjct: 201 SAIAESELEYNLEHKSCSVYLKVILTRYNNHLRKYVSKDSNVYAIIWTTNPWTIFSNEAV 260
Query: 475 AFNPALEYSVASVKGAN--VIVAKCLVENLKWTF-QTDIDVVCDFPGQYLQDITYIHPIN 531
A++ Y V + + +V+K + L + + V + G L D Y HP
Sbjct: 261 AYDVNATYVVLQCQASREVYLVSKNFSDKLISLLPRARLHKVGELIGNDLCDCFYYHP-T 319
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ ++ LP+ V S GTGLVH AP HG++DF LA +P+ + G ++ + G
Sbjct: 320 RVSCEMPFLPSSHVCESVGTGLVHIAPCHGKEDFELAKKYDLPLNLFVDESGCFTQEIGA 379
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L GL++L +G V+ L+EP + E HSYPYDWRT+KPV+++ S QWF+DTE++
Sbjct: 380 ELAGLSVLDEGNASVIKLLEPITIHKEVISHSYPYDWRTRKPVVIRLSSQWFVDTEKLSH 439
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD--TIIVNEANI 709
AL ++VN +P S K ++ I+QRP WCISRQR WGVPIPV + + I++ I
Sbjct: 440 FALEEYKKVNVIPASHKHSMLPFISQRPNWCISRQRAWGVPIPVLFRRSDYSPIIDYDLI 499
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL------NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H + + G DFW++ + +QL+ S + +V KS ++ D+WFDSG+SW V+
Sbjct: 500 DHISSRVASEGSDFWFTETCDQLIPEIFWKKWSLESHDVYKSTEVFDVWFDSGLSWLCVI 559
Query: 764 K----------DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
++ A Y+EG DQ GWF +SLL S+AL APF+N+ +HGFV D G
Sbjct: 560 NSSNYSRLPCSNRVADTYLEGHDQFRGWFSASLLLSIALTGCAPFKNLVIHGFVADSCGR 619
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GN I+ ++ VD++R W A +
Sbjct: 620 KMSKSLGNGITPKELISSQNGC---------------------------VDIMRRW-ACY 651
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLH--------NHSESTG-SISRYV-- 922
+ D +G ++ + + +R+SLR++ G L+ N++E T S+S+ +
Sbjct: 652 SGLDTVCHLGSKEISQNAASYKALRNSLRFMTGNLYDFCPVTQLNYNEKTNYSLSKLILD 711
Query: 923 ------------------DVYMLKRLCEF-QNTMDTLYGEFQYARASRVLLNFVVNELSA 963
D +L L N+++T Y +F+Y + F+ + LS+
Sbjct: 712 MANNVSEDTCNSLCLTALDKAVLYSLSTIISNSLNTYYPQFRYNTILSEIDQFL-SYLSS 770
Query: 964 FYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
Y T VKDRLY +S + +R + L +API+P+L EEV S
Sbjct: 771 VYITSVKDRLYFNSPDDSSRRNTQTVFWLTVECLKALLAPILPYLMEEVES 821
Score = 303 bits (775), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 236/388 (60%), Gaps = 12/388 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
+ + +FILHDGPPYANG H GHA+NK+LKD+ LR LL G V Y+PGWDCHGLPIELK
Sbjct: 61 DAQHKFILHDGPPYANGELHAGHALNKVLKDVLLRLKLLSGHSVEYIPGWDCHGLPIELK 120
Query: 76 AITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
A+ + + + SP + RK A A + + TQK F+ WG++ W CY T DK + +L
Sbjct: 121 AVENLN-ISSPEETRKLASLLAEKFVKTQKTSFQDWGIIGSWT-GCYSTMDKCFEAVELK 178
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL--- 192
F +L+ + R L PVYWS +R+A+AESELEY +H S S+YLK+ L + HL
Sbjct: 179 AFSDLHSK--ALRSL-PVYWSTCTRSAIAESELEYNLEHKSCSVYLKVILTRYNNHLRKY 235
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESLKWTF- 249
+ ++++A+IWTT PW++ +N+ +A++ Y V + + +V+K + L
Sbjct: 236 VSKDSNVYAIIWTTNPWTIFSNEAVAYDVNATYVVLQCQASREVYLVSKNFSDKLISLLP 295
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
+ + V + G L D Y HP + ++ LP+ V S GTGLVH AP HG++DF
Sbjct: 296 RARLHKVGELIGNDLCDCFYYHP-TRVSCEMPFLPSSHVCESVGTGLVHIAPCHGKEDFE 354
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPY 369
LA +P+ + G ++ + G L GL++L +G V+ L+EP + E HSYPY
Sbjct: 355 LAKKYDLPLNLFVDESGCFTQEIGAELAGLSVLDEGNASVIKLLEPITIHKEVISHSYPY 414
Query: 370 DWRTKKPVILKASQQWFIDTERIKPEAL 397
DWRT+KPV+++ S QWF+DTE++ AL
Sbjct: 415 DWRTRKPVVIRLSSQWFVDTEKLSHFAL 442
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 1106 LNLITNQ-GKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
LNL ++ G ++ + G L GL++L EG V+ L+EP + E HSYPYDWRT+KPV
Sbjct: 363 LNLFVDESGCFTQEIGAELAGLSVLDEGNASVIKLLEPITIHKEVISHSYPYDWRTRKPV 422
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
+++ S QWF+DTE++ AL + VN +P S K S+ I+QRP WCISRQR WGVPIP
Sbjct: 423 VIRLSSQWFVDTEKLSHFALEEYKKVNVIPASHKHSMLPFISQRPNWCISRQRAWGVPIP 482
Query: 1225 VFYDGD--TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
V + + I++ I H + + G DFW++ +QL+
Sbjct: 483 VLFRRSDYSPIIDYDLIDHISSRVASEGSDFWFTETCDQLI 523
>gi|422871405|ref|ZP_16917898.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1087]
gi|328945573|gb|EGG39724.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1087]
Length = 937
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 323/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F TD+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWTDVQVLATYRGQELNQIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYHVGVANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
++++ F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIDKIKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL + +KIR++LR+L+ + + + +++ R VD YM R + T+
Sbjct: 635 MDILGQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R +++ + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTIDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDVLVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L + F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEKEEF 778
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 224/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTSDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVQVLATYRGQELNQIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYHVGVANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVVPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L ++ + F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIDKIKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|256073075|ref|XP_002572858.1| isoleucine--tRNA ligase [Schistosoma mansoni]
Length = 1027
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 341/651 (52%), Gaps = 84/651 (12%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFI 474
+A+AESELEY +H S S+YLK+ L + HL + ++++A+IWTT PW++ +N+ +
Sbjct: 201 SAIAESELEYNLEHKSCSVYLKVILTRYNNHLRKYVSKDSNVYAIIWTTNPWTIFSNEAV 260
Query: 475 AFNPALEYSVASVKGAN--VIVAKCLVENLKWTF-QTDIDVVCDFPGQYLQDITYIHPIN 531
A++ Y V + + +V+K + L + + V + G L D Y HP
Sbjct: 261 AYDVNATYVVLQCQASREVYLVSKNFSDKLISLLPRARLHKVGELIGNDLCDCFYYHP-T 319
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ ++ LP+ V S GTGLVH AP HG++DF LA +P+ + G ++ + G
Sbjct: 320 RVSCEMPFLPSSHVCESVGTGLVHIAPCHGKEDFELAKKYDLPLNLFVDESGCFTQEIGA 379
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
L GL++L +G V+ L+EP + E HSYPYDWRT+KPV+++ S QWF+DTE++
Sbjct: 380 ELAGLSVLDEGNASVIKLLEPITIHKEVISHSYPYDWRTRKPVVIRLSSQWFVDTEKLSH 439
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD--TIIVNEANI 709
AL ++VN +P S K ++ I+QRP WCISRQR WGVPIPV + + I++ I
Sbjct: 440 FALEEYKKVNVIPASHKHSMLPFISQRPNWCISRQRAWGVPIPVLFRRSDYSPIIDYDLI 499
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL------NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H + + G DFW++ + +QL+ S + +V KS ++ D+WFDSG+SW V+
Sbjct: 500 DHISSRVASEGSDFWFTETCDQLIPEIFWKKWSLESHDVYKSTEVFDVWFDSGLSWLCVI 559
Query: 764 K----------DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGA 813
++ A Y+EG DQ GWF +SLL S+AL APF+N+ +HGFV D G
Sbjct: 560 NSSNYSRLPCSNRVADTYLEGHDQFRGWFSASLLLSIALTGCAPFKNLVIHGFVADSCGR 619
Query: 814 KMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAH 873
KMSKS+GN I+ ++ VD++R W A +
Sbjct: 620 KMSKSLGNGITPKELISSQNGC---------------------------VDIMRRW-ACY 651
Query: 874 ASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLH--------NHSESTG-SISRYV-- 922
+ D +G ++ + + +R+SLR++ G L+ N++E T S+S+ +
Sbjct: 652 SGLDTVCHLGSKEISQNAASYKALRNSLRFMTGNLYDFCPVTQLNYNEKTNYSLSKLILD 711
Query: 923 ------------------DVYMLKRLCEF-QNTMDTLYGEFQYARASRVLLNFVVNELSA 963
D +L L N+++T Y +F+Y + F+ + LS+
Sbjct: 712 MANNVSEDTCNSLCLTALDKAVLYSLSTIISNSLNTYYPQFRYNTILSEIDQFL-SYLSS 770
Query: 964 FYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
Y T VKDRLY +S + +R + L +API+P+L EEV S
Sbjct: 771 VYITSVKDRLYFNSPDDSSRRNTQTVFWLTVECLKALLAPILPYLMEEVES 821
Score = 303 bits (775), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 236/388 (60%), Gaps = 12/388 (3%)
Query: 16 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 75
+ + +FILHDGPPYANG H GHA+NK+LKD+ LR LL G V Y+PGWDCHGLPIELK
Sbjct: 61 DAQHKFILHDGPPYANGELHAGHALNKVLKDVLLRLKLLSGHSVEYIPGWDCHGLPIELK 120
Query: 76 AITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
A+ + + + SP + RK A A + + TQK F+ WG++ W CY T DK + +L
Sbjct: 121 AVENLN-ISSPEETRKLASLLAEKFVKTQKTSFQDWGIIGSWT-GCYSTMDKCFEAVELK 178
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHL--- 192
F +L+ + R L PVYWS +R+A+AESELEY +H S S+YLK+ L + HL
Sbjct: 179 AFSDLHSK--ALRSL-PVYWSTCTRSAIAESELEYNLEHKSCSVYLKVILTRYNNHLRKY 235
Query: 193 LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESLKWTF- 249
+ ++++A+IWTT PW++ +N+ +A++ Y V + + +V+K + L
Sbjct: 236 VSKDSNVYAIIWTTNPWTIFSNEAVAYDVNATYVVLQCQASREVYLVSKNFSDKLISLLP 295
Query: 250 QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
+ + V + G L D Y HP + ++ LP+ V S GTGLVH AP HG++DF
Sbjct: 296 RARLHKVGELIGNDLCDCFYYHP-TRVSCEMPFLPSSHVCESVGTGLVHIAPCHGKEDFE 354
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENYQHSYPY 369
LA +P+ + G ++ + G L GL++L +G V+ L+EP + E HSYPY
Sbjct: 355 LAKKYDLPLNLFVDESGCFTQEIGAELAGLSVLDEGNASVIKLLEPITIHKEVISHSYPY 414
Query: 370 DWRTKKPVILKASQQWFIDTERIKPEAL 397
DWRT+KPV+++ S QWF+DTE++ AL
Sbjct: 415 DWRTRKPVVIRLSSQWFVDTEKLSHFAL 442
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 1106 LNLITNQ-GKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPV 1164
LNL ++ G ++ + G L GL++L EG V+ L+EP + E HSYPYDWRT+KPV
Sbjct: 363 LNLFVDESGCFTQEIGAELAGLSVLDEGNASVIKLLEPITIHKEVISHSYPYDWRTRKPV 422
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
+++ S QWF+DTE++ AL + VN +P S K S+ I+QRP WCISRQR WGVPIP
Sbjct: 423 VIRLSSQWFVDTEKLSHFALEEYKKVNVIPASHKHSMLPFISQRPNWCISRQRAWGVPIP 482
Query: 1225 VFYDGD--TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
V + + I++ I H + + G DFW++ +QL+
Sbjct: 483 VLFRRSDYSPIIDYDLIDHISSRVASEGSDFWFTETCDQLI 523
>gi|425058745|ref|ZP_18462121.1| isoleucine--tRNA ligase [Enterococcus faecium 504]
gi|403037600|gb|EJY48865.1| isoleucine--tRNA ligase [Enterococcus faecium 504]
Length = 932
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 237/398 (59%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GK F+LHDGPPYANG H+GH++NKI KDI +RS + G R YV G
Sbjct: 34 NRIYQKRQELNEGKTSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVLG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|387142803|ref|YP_005731196.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
gi|418424331|ref|ZP_12997454.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS1]
gi|418454612|ref|ZP_13025874.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457488|ref|ZP_13028691.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS11b]
gi|269940686|emb|CBI49066.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
gi|387720634|gb|EIK08541.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus VRS1]
gi|387745727|gb|EIK32477.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387747220|gb|EIK33929.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
VRS11b]
Length = 917
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 321/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGF +D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFFMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|430833719|ref|ZP_19451730.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0679]
gi|430486124|gb|ELA62992.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0679]
Length = 932
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVKWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVKWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|424994832|ref|ZP_18406751.1| isoleucine--tRNA ligase [Enterococcus faecium ERV168]
gi|402978930|gb|EJX94631.1| isoleucine--tRNA ligase [Enterococcus faecium ERV168]
Length = 937
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|329767098|ref|ZP_08258626.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
gi|328837823|gb|EGF87448.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
Length = 910
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 228/624 (36%), Positives = 325/624 (52%), Gaps = 65/624 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY DH S SIY+ +L + +G +IWTTTPW+LPAN IA +
Sbjct: 192 SALAEAEIEYH-DHTSPSIYVAFELVSENGAVEKGT---KFVIWTTTPWTLPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P EY V G + +VAK L E W +V+ G+ L+ + HP
Sbjct: 248 PDFEYQVVKYNGESYLVAKERVAFLAEKFGWENYETGEVLV---GKDLEYLLCKHPF--L 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA-LAEKIPVLNLITNQGKYSPDAGPG 592
R L+ A +V+ GTGLVH AP HG DD+L+ L K+ VL+ + NQG + +AG
Sbjct: 303 DRTSTLILADYVTLDSGTGLVHTAPGHGVDDYLVGQLQYKLGVLSPVDNQGVLTEEAGQ- 361
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G + KD + HL E L E+ HSYP+DWR+KKP+I +A+ QWF + +
Sbjct: 362 FAGKFVFDANKDIIAHLDETGALLKQEDITHSYPHDWRSKKPIIFRATPQWFCSVDAFRS 421
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E L ++ F E K L + I R W ISRQRVWGVPIPVFY +G+ I+ E I
Sbjct: 422 ELLEAVDNTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIPVFYAENGEAILDIEL-I 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H + +E G + W+ ++LL + N TK DI+D+WFDSG S
Sbjct: 481 EHVAKIFEEEGSNVWFYKDAKELLPEGYTHPGSPNGEFTKEMDIMDVWFDSGTSHQGCCA 540
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + GFV+D G KMSKS+
Sbjct: 541 IREDLTYPADLYLEGSDQYRGWFNSSLITSVAVSGVAPYKELVSAGFVMDGNGNKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVIS +D+ K+L G +++R W +A
Sbjct: 601 GNVISPNDV---GKEL--------------------------GAEIIRLW-SASVDYTQD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS-ESTGSISRY-----VDVYMLKRLCEF 933
V I K+IL + +KIR++ R+LLG L N S + + Y +D YM+ + +
Sbjct: 631 VRISKDILKQVSETYRKIRNTFRFLLGNLFNGSFNNKTDLVAYENLEELDKYMVLKFEKV 690
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y +Q+ + L+NF ELS+FY KD LY + + RLS L L+ +
Sbjct: 691 VAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIEGEDSHKRLSMLTVLYTV 750
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLP 1017
+R +API+ AEEVY ++P
Sbjct: 751 LSKSVRLLAPILSFTAEEVYDNMP 774
Score = 289 bits (739), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 234/400 (58%), Gaps = 19/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+ E GKP ++LHDGPPYANG HIGHA+NKILKD ++ + G +YVPGW
Sbjct: 36 DLYNKILEKNAGKPSYVLHDGPPYANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGW 95
Query: 66 DCHGLPIELKAITSK-DKLLSPLD-IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE + + D+ P + R K K++AL+ ++ Q+A+F+ GVL DW+ N Y
Sbjct: 96 DTHGLPIEQVLVNNGVDRKSMPANKFRNKCKDYALKQVDKQRADFKKLGVLGDWD-NPYL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T D ++ Q+ F + + YIY+ LKP+YWSPSS +ALAE+E+EY DH S SIY+
Sbjct: 155 TLDPKFEAEQIRVFGKMVDKGYIYKGLKPIYWSPSSESALAEAEIEYH-DHTSPSIYVAF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK---- 239
+L + +G +IWTTTPW+LPAN IA +P EY V G + +VAK
Sbjct: 214 ELVSENGAVEKGT---KFVIWTTTPWTLPANLGIAVHPDFEYQVVKYNGESYLVAKERVA 270
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L E W EV+ G+ L+ + HP R L+ A +V+ GTGLVH
Sbjct: 271 FLAEKFGWENYETGEVLV---GKDLEYLLCKHPF--LDRTSTLILADYVTLDSGTGLVHT 325
Query: 300 APAHGQDDFLLA-LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG DD+L+ L K+ VL+ + NQG + +AG G + KD + HL E L
Sbjct: 326 APGHGVDDYLVGQLQYKLGVLSPVDNQGVLTEEAGQ-FAGKFVFDANKDIIAHLDETGAL 384
Query: 359 WT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E+ HSYP+DWR+KKP+I +A+ QWF + + E L
Sbjct: 385 LKQEDITHSYPHDWRSKKPIIFRATPQWFCSVDAFRSELL 424
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPV 1164
L+ + NQG + +AG G + KD + HL E L E+ HSYP+DWR+KKP+
Sbjct: 346 LSPVDNQGVLTEEAGQ-FAGKFVFDANKDIIAHLDETGALLKQEDITHSYPHDWRSKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF + + E L ++ F E K L + I R W ISRQRVWGVPIP
Sbjct: 405 IFRATPQWFCSVDAFRSELLEAVDNTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY +G+ I+ E I+H + +E G + W+ ++LL
Sbjct: 465 VFYAENGEAILDIEL-IEHVAKIFEEEGSNVWFYKDAKELL 504
>gi|323489509|ref|ZP_08094736.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
gi|323396640|gb|EGA89459.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
Length = 920
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 220/620 (35%), Positives = 328/620 (52%), Gaps = 62/620 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + L EG + +IWTTTPW++PAN I+ +
Sbjct: 191 SSLAEAEIEYH-DKKSPSIYVSFPVTDGKGVLAEGT---NFIIWTTTPWTIPANLGISVH 246
Query: 478 PALEYSVASVKGANVIVAKCLV----ENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
L+Y+ SV G+ IVA+ L+ E L WT D +VV G+ L++I HP+
Sbjct: 247 AKLDYAEVSVNGSQYIVAQELLKEVSEELGWT---DAEVVRVIKGEELENILTKHPLY-- 301
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R ++ V++ GTG VH AP HG+DDFL+ + VL + +G + +A PG
Sbjct: 302 DRTSLVMLGEHVTTDSGTGCVHTAPGHGEDDFLIGKKYGLDVLCPVDERGVMTAEA-PGF 360
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
EG K L + L + HSYP+DWRTKKPVI +A+ QWF+ E + +
Sbjct: 361 EGEFYDKANKSITEALDKVGALEKLTFITHSYPHDWRTKKPVIYRATAQWFVSIEAFRDQ 420
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L ++E +F P + L + + R W ISRQRVWGVPIPVFY +GD +I E I
Sbjct: 421 ILNAIKETSFTPAWGETRLFNMLRDRGDWNISRQRVWGVPIPVFYAENGDPVITEET-IA 479
Query: 711 HFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
H L E+G + W+ S ++LL + S N TK DI+D+WFDSG S VL +
Sbjct: 480 HIAKLFRENGSNVWFERSTDELLPPGFTHPSSPNGVFTKEMDIMDVWFDSGSSHQGVLDE 539
Query: 766 K-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
+ PA +Y+EG DQ GWF SSL TSVA+ AP++ + HGF +D G KMSKS+G
Sbjct: 540 REDLQYPADLYLEGSDQYRGWFNSSLTTSVAINGHAPYKGILSHGFTLDGNGRKMSKSLG 599
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI +P+ K + G D+LR WVA+ V
Sbjct: 600 NVI-----------VPS------------------KVMNQMGADILRLWVAS-VDYTADV 629
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNT 936
+ + +KIR++L++L G L + +E ++ R +D YM +L + T
Sbjct: 630 RVSDENFKQVSEVYRKIRNTLKFLHGNLADFNEQEHRVAFEDMREMDQYMAMKLQKMVET 689
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++++ L N+ N+LS+FY + KD +Y +S + R + + +
Sbjct: 690 VRKGYETYEFSTIYHALNNYCANDLSSFYLDVAKDVVYIESADHPHRRAMQTVMFDSLMA 749
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
+L+ API+PH A+E++S+L
Sbjct: 750 ILKLAAPIIPHTADELWSYL 769
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 233/399 (58%), Gaps = 20/399 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y ++ G+P F+LHDGPPYANG H+GHA+NK+LKD+ +RS + G YVPGWD
Sbjct: 36 IYKQVQDRTAGRPFFVLHDGPPYANGDLHMGHALNKVLKDMIVRSRSMMGFHAPYVPGWD 95
Query: 67 CHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
HGLPIE +A+T+K K +S + RK + +A + I+ Q+++F+ GV DWE N Y
Sbjct: 96 THGLPIE-QALTNKGVNRKEMSLAEFRKLCEEYAFQQIDNQRSQFKRIGVRGDWE-NPYV 153
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T Y Q+ F + + YIY+ LKPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 154 TLKPAYEARQIEVFGKMANKGYIYKGLKPVYWSPSSESSLAEAEIEYH-DKKSPSIYVSF 212
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV- 242
+ L EG + +IWTTTPW++PAN I+ + L+Y+ SV G+ IVA+ L+
Sbjct: 213 PVTDGKGVLAEGT---NFIIWTTTPWTIPANLGISVHAKLDYAEVSVNGSQYIVAQELLK 269
Query: 243 ---ESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
E L W TD EVV G+ L++I HP+ R ++ V++ GTG VH
Sbjct: 270 EVSEELGW---TDAEVVRVIKGEELENILTKHPLY--DRTSLVMLGEHVTTDSGTGCVHT 324
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DDFL+ + VL + +G + +A PG EG K L + L
Sbjct: 325 APGHGEDDFLIGKKYGLDVLCPVDERGVMTAEA-PGFEGEFYDKANKSITEALDKVGALE 383
Query: 360 TENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ HSYP+DWRTKKPVI +A+ QWF+ E + + L
Sbjct: 384 KLTFITHSYPHDWRTKKPVIYRATAQWFVSIEAFRDQIL 422
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKPVI +A+ QWF+ E + + L ++ +F P + L + + R W
Sbjct: 390 HSYPHDWRTKKPVIYRATAQWFVSIEAFRDQILNAIKETSFTPAWGETRLFNMLRDRGDW 449
Query: 1212 CISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
ISRQRVWGVPIPVFY +GD +I E I H L E+G + W+ ++LL
Sbjct: 450 NISRQRVWGVPIPVFYAENGDPVITEET-IAHIAKLFRENGSNVWFERSTDELL 502
>gi|431768788|ref|ZP_19557221.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1321]
gi|430628656|gb|ELB65090.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1321]
Length = 932
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYKKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|386344432|ref|YP_006040596.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus JIM 8232]
gi|339277893|emb|CCC19641.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus JIM 8232]
Length = 929
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 213/622 (34%), Positives = 325/622 (52%), Gaps = 64/622 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G IVA L+ +L F +++V+ + G L I HP + E
Sbjct: 247 ADIEYVLVKPAGETRKFIVASELLNSLSEKFAWEEVEVLNTYRGDELNQIVTEHPWDSEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + +G +AGP
Sbjct: 307 DELVIL-GEHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVVVTVNERGIMMENAGP--- 362
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
+ G D+V +V + L E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 363 --DFAGKFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
E L +E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I
Sbjct: 421 QEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDRTPIMTEETI 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L +EHG WW + LL + N TK NDI+D+WFDSG SW+ V+
Sbjct: 481 EHVAKLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVVV 540
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+
Sbjct: 541 NRPELTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV-AAHASKDP 878
GN I+ D+ + +G ++LR WV + S D
Sbjct: 601 GNTIAPSDVEK-----------------------------QFGAEILRLWVISVDTSND- 630
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V I +IL+ + +KIR++LR+L+ + + +T +++ R VD YM R +
Sbjct: 631 -VRISMDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
++ Y F++ + L+NF+ ELSAFY KD +Y +S R ++I
Sbjct: 690 KSIRDAYENFEFLTIYKSLVNFINVELSAFYLDFAKDVVYIESAKSLERRQMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHL 1016
+ + + PI+PH AEE++S+L
Sbjct: 750 VKITKLLTPILPHTAEEIWSYL 771
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 225/402 (55%), Gaps = 20/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G ++PG
Sbjct: 34 AKVYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G IVA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGETRKFIVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F ++EV+ + G L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFAWEEVEVLNTYRGDELNQIVTEHPWDSEVDELVIL-GEHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--- 356
AP G+DD+ + +A + V+ + +G +AGP + G D+V +V
Sbjct: 328 APGFGEDDYNVGVANGLEVVVTVNERGIMMENAGP-----DFAGKFYDKVAPIVMEKLGD 382
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 383 LLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 10/160 (6%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP + G+ D+V +V + L E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGP-----DFAGKFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E V F E K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY D T I+ E I+H L +EHG WW + LL
Sbjct: 465 IFYAEDRTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|269792595|ref|YP_003317499.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100230|gb|ACZ19217.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 927
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/622 (33%), Positives = 331/622 (53%), Gaps = 64/622 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL-LEGA-TDLHALIWTTTPWSLPANQFIA 475
TALA +E+EY+ D S SIY+ + +P+ + LEG DL+ +IWTTTPW+LPA+ +A
Sbjct: 194 TALAAAEIEYE-DESSPSIYVAYPMESLPSGVSLEGGLQDLYVVIWTTTPWTLPASMAVA 252
Query: 476 FNPALEYSVASVK-GANVIVAKCLVENLKWTFQTDI-----DVVCDFPGQYLQDITYIHP 529
+P +Y V + G IVA E F+ D+ ++ F G+ L+ +HP
Sbjct: 253 LHPQYKYGVFRARDGRRFIVALERREE----FEGDVHLGLGEMEAVFTGEQLEGAMAVHP 308
Query: 530 INKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
++ R + L+ A +V GTG VH AP HG +DF + + +LN + N+G + D
Sbjct: 309 FYQD-RKIPLVLADYVVLDSGTGCVHTAPGHGVEDFETGVRYGLEILNPVDNRGVFLKDV 367
Query: 590 GPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
P + GL I DG +L ++ +L + +HSYP+ WR K+PVI +A++QWF+ +
Sbjct: 368 -PLVGGLPI-SDGAKVILEILTESRRLLSSGEIKHSYPHCWRCKQPVIFRATEQWFVSVQ 425
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVN 705
+ +A+ ++ V +VP K + + + R WCISRQRVWGVPIP FY D ++
Sbjct: 426 AFRDQAMDAIDTVQWVPSWGKDRIGNMVRDRSDWCISRQRVWGVPIPAFYCQDCGKLVAE 485
Query: 706 EANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWS 760
A ++ +I G D WW+ S +LL +SN++K +DI+D+WFDSG+S
Sbjct: 486 PAMVRRVAQVIRSEGSDAWWARSPMELLGDLCSCPHCGSSNLSKESDIMDVWFDSGVSHL 545
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
VL+ + PA +Y+EG DQ GWF +SLLT +A + APF+ V HGF+VD KG KM
Sbjct: 546 AVLETRKELGWPADMYLEGSDQHRGWFQTSLLTGIATRGKAPFQQVLTHGFIVDGKGRKM 605
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GNV+S ++ + YG D+LR WVA+
Sbjct: 606 SKSLGNVVSPQEV-----------------------------IDKYGADILRLWVASTDY 636
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLC 931
+ V I IL + + ++IR++ R++LG L + + I R D + + RL
Sbjct: 637 RG-DVRISDRILKNLVESYRRIRNTARFILGNLSDFDPAKHRIPRTEMLPFDKWAVSRLQ 695
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
+ + Y E+++ + F N++S+ Y + KDRLY D +G +R S +
Sbjct: 696 DLIEKVTRGYEEYEFHVPYFAVHQFCDNDMSSLYLDVCKDRLYADHQDGISRRSAQSAMW 755
Query: 992 NIFHVLLRTVAPIMPHLAEEVY 1013
I L + ++PI+ EE++
Sbjct: 756 EILISLCKILSPILSFTCEEIW 777
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 237/405 (58%), Gaps = 24/405 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y +E +G P FILHDGPPYANG HIG A NKILKD + ++G R YVPGWD
Sbjct: 38 IYQKMQEIRDGSPTFILHDGPPYANGHIHIGTAFNKILKDFIPKFKSMRGFRAPYVPGWD 97
Query: 67 CHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
HGLPIELK + +DK+ +SPL++R + +AL ++ Q+ EF+ GVL DW+ + Y
Sbjct: 98 THGLPIELK-VLKEDKVDREQVSPLELRSRCAKYALGFVDVQREEFKRLGVLGDWD-DPY 155
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T EY Q+ F ++ ++ +Y+ KPV+W +TALA +E+EY+ D S SIY+
Sbjct: 156 LTLKPEYEAAQVEAFADMLERGLVYKGKKPVFWCTDCQTALAAAEIEYE-DESSPSIYVA 214
Query: 183 IKLNQVPAHL-LEGA-TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK-GANVIVAK 239
+ +P+ + LEG DL+ +IWTTTPW+LPA+ +A +P +Y V + G IVA
Sbjct: 215 YPMESLPSGVSLEGGLQDLYVVIWTTTPWTLPASMAVALHPQYKYGVFRARDGRRFIVAL 274
Query: 240 CLVESLKWTFQTDI-----EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGT 294
E F+ D+ E+ F G+ L+ +HP ++ R + L+ A +V GT
Sbjct: 275 ERREE----FEGDVHLGLGEMEAVFTGEQLEGAMAVHPFYQD-RKIPLVLADYVVLDSGT 329
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
G VH AP HG +DF + + +LN + N+G + D P + GL I DG +L ++
Sbjct: 330 GCVHTAPGHGVEDFETGVRYGLEILNPVDNRGVFLKDV-PLVGGLPI-SDGAKVILEILT 387
Query: 355 PD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L + +HSYP+ WR K+PVI +A++QWF+ + + +A+
Sbjct: 388 ESRRLLSSGEIKHSYPHCWRCKQPVIFRATEQWFVSVQAFRDQAM 432
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKP 1163
LN + N+G + D P + GL I +G +L ++ +L + +HSYP+ WR K+P
Sbjct: 354 LNPVDNRGVFLKDV-PLVGGLPI-SDGAKVILEILTESRRLLSSGEIKHSYPHCWRCKQP 411
Query: 1164 VILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPI 1223
VI +A++QWF+ + + +A+ ++ V +VP K + + + R WCISRQRVWGVPI
Sbjct: 412 VIFRATEQWFVSVQAFRDQAMDAIDTVQWVPSWGKDRIGNMVRDRSDWCISRQRVWGVPI 471
Query: 1224 PVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
P FY D ++ A ++ +I G D WW+ +LL
Sbjct: 472 PAFYCQDCGKLVAEPAMVRRVAQVIRSEGSDAWWARSPMELLG 514
>gi|417655626|ref|ZP_12305336.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
gi|418321964|ref|ZP_12933303.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus VCU006]
gi|418875127|ref|ZP_13429387.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC93]
gi|448744996|ref|ZP_21726872.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/Y21]
gi|329728844|gb|EGG65265.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
gi|365224579|gb|EHM65844.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus VCU006]
gi|377770187|gb|EHT93949.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CIGC93]
gi|445561705|gb|ELY17896.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/Y21]
Length = 917
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF + + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGETRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF + + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGETRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|293560464|ref|ZP_06676956.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
gi|314937861|ref|ZP_07845177.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
gi|314941352|ref|ZP_07848245.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
gi|314951348|ref|ZP_07854402.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
gi|314992821|ref|ZP_07858222.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
gi|314997981|ref|ZP_07862876.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
gi|424971989|ref|ZP_18385386.1| isoleucine--tRNA ligase [Enterococcus faecium P1139]
gi|424977781|ref|ZP_18390766.1| isoleucine--tRNA ligase [Enterococcus faecium P1123]
gi|425036630|ref|ZP_18441372.1| isoleucine--tRNA ligase [Enterococcus faecium 514]
gi|425043082|ref|ZP_18447351.1| isoleucine--tRNA ligase [Enterococcus faecium 511]
gi|425048716|ref|ZP_18452607.1| isoleucine--tRNA ligase [Enterococcus faecium 509]
gi|291605612|gb|EFF35054.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
gi|313587993|gb|EFR66838.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
gi|313592625|gb|EFR71470.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
gi|313596565|gb|EFR75410.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
gi|313599775|gb|EFR78618.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
gi|313642719|gb|EFS07299.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
gi|402956928|gb|EJX74351.1| isoleucine--tRNA ligase [Enterococcus faecium P1139]
gi|402964523|gb|EJX81297.1| isoleucine--tRNA ligase [Enterococcus faecium P1123]
gi|403014171|gb|EJY27189.1| isoleucine--tRNA ligase [Enterococcus faecium 514]
gi|403021321|gb|EJY33788.1| isoleucine--tRNA ligase [Enterococcus faecium 511]
gi|403030031|gb|EJY41751.1| isoleucine--tRNA ligase [Enterococcus faecium 509]
Length = 932
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKSYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|257885188|ref|ZP_05664841.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
gi|257821040|gb|EEV48174.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
Length = 932
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQAEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQAEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|69244704|ref|ZP_00602968.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
gi|257879376|ref|ZP_05659029.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|257881758|ref|ZP_05661411.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|260558818|ref|ZP_05831007.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
gi|261206528|ref|ZP_05921228.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289565438|ref|ZP_06445887.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|293568290|ref|ZP_06679614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
gi|294614701|ref|ZP_06694603.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
gi|294619001|ref|ZP_06698496.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
gi|294621613|ref|ZP_06700778.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
gi|314950111|ref|ZP_07853397.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
gi|383328095|ref|YP_005353979.1| isoleucyl-tRNA synthetase [Enterococcus faecium Aus0004]
gi|389867985|ref|YP_006375408.1| isoleucine--tRNA ligase [Enterococcus faecium DO]
gi|415898391|ref|ZP_11551276.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4453]
gi|416130926|ref|ZP_11597589.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4452]
gi|424789437|ref|ZP_18216091.1| isoleucine--tRNA ligase [Enterococcus faecium V689]
gi|424809968|ref|ZP_18235336.1| isoleucine--tRNA ligase [Enterococcus faecium S447]
gi|424826044|ref|ZP_18250985.1| isoleucine--tRNA ligase [Enterococcus faecium R501]
gi|424859459|ref|ZP_18283467.1| isoleucine--tRNA ligase [Enterococcus faecium R499]
gi|424901151|ref|ZP_18324688.1| isoleucine--tRNA ligase [Enterococcus faecium R497]
gi|424951730|ref|ZP_18366798.1| isoleucine--tRNA ligase [Enterococcus faecium R496]
gi|424955096|ref|ZP_18369956.1| isoleucine--tRNA ligase [Enterococcus faecium R494]
gi|424958664|ref|ZP_18373300.1| isoleucine--tRNA ligase [Enterococcus faecium R446]
gi|424959603|ref|ZP_18374181.1| isoleucine--tRNA ligase [Enterococcus faecium P1986]
gi|424964060|ref|ZP_18378201.1| isoleucine--tRNA ligase [Enterococcus faecium P1190]
gi|424969219|ref|ZP_18382802.1| isoleucine--tRNA ligase [Enterococcus faecium P1140]
gi|424973333|ref|ZP_18386621.1| isoleucine--tRNA ligase [Enterococcus faecium P1137]
gi|424982084|ref|ZP_18394767.1| isoleucine--tRNA ligase [Enterococcus faecium ERV99]
gi|424985813|ref|ZP_18398273.1| isoleucine--tRNA ligase [Enterococcus faecium ERV69]
gi|424988376|ref|ZP_18400698.1| isoleucine--tRNA ligase [Enterococcus faecium ERV38]
gi|424990631|ref|ZP_18402837.1| isoleucine--tRNA ligase [Enterococcus faecium ERV26]
gi|424998818|ref|ZP_18410481.1| isoleucine--tRNA ligase [Enterococcus faecium ERV165]
gi|425002665|ref|ZP_18414085.1| isoleucine--tRNA ligase [Enterococcus faecium ERV161]
gi|425004809|ref|ZP_18416094.1| isoleucine--tRNA ligase [Enterococcus faecium ERV102]
gi|425009765|ref|ZP_18420759.1| isoleucine--tRNA ligase [Enterococcus faecium E422]
gi|425014538|ref|ZP_18425212.1| isoleucine--tRNA ligase [Enterococcus faecium E417]
gi|425019154|ref|ZP_18429540.1| isoleucine--tRNA ligase [Enterococcus faecium C621]
gi|425019563|ref|ZP_18429911.1| isoleucine--tRNA ligase [Enterococcus faecium C497]
gi|425023878|ref|ZP_18433973.1| isoleucine--tRNA ligase [Enterococcus faecium C1904]
gi|425031126|ref|ZP_18436269.1| isoleucine--tRNA ligase [Enterococcus faecium 515]
gi|425039757|ref|ZP_18444261.1| isoleucine--tRNA ligase [Enterococcus faecium 513]
gi|425061062|ref|ZP_18464327.1| isoleucine--tRNA ligase [Enterococcus faecium 503]
gi|427395404|ref|ZP_18888326.1| isoleucyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
gi|430821332|ref|ZP_19439943.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0045]
gi|430824071|ref|ZP_19442638.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0120]
gi|430829503|ref|ZP_19447596.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0269]
gi|430831542|ref|ZP_19449593.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0333]
gi|430837029|ref|ZP_19455005.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0680]
gi|430839107|ref|ZP_19457049.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0688]
gi|430844771|ref|ZP_19462668.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1050]
gi|430846893|ref|ZP_19464747.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1133]
gi|430851039|ref|ZP_19468795.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1185]
gi|430853477|ref|ZP_19471205.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1258]
gi|430856780|ref|ZP_19474464.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1392]
gi|430859682|ref|ZP_19477291.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1552]
gi|430862434|ref|ZP_19479751.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1573]
gi|430867384|ref|ZP_19482378.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1574]
gi|430869878|ref|ZP_19483033.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1575]
gi|430963170|ref|ZP_19487462.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1576]
gi|431011088|ref|ZP_19489832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1578]
gi|431185992|ref|ZP_19500055.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1620]
gi|431237081|ref|ZP_19503224.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1622]
gi|431264016|ref|ZP_19505904.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1623]
gi|431290542|ref|ZP_19506677.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1626]
gi|431382760|ref|ZP_19511353.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1627]
gi|431446026|ref|ZP_19513708.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1630]
gi|431523810|ref|ZP_19516835.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1634]
gi|431677804|ref|ZP_19524402.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1904]
gi|431743243|ref|ZP_19532123.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2071]
gi|431745481|ref|ZP_19534325.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2134]
gi|431747871|ref|ZP_19536635.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2297]
gi|431754102|ref|ZP_19542767.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2883]
gi|431760587|ref|ZP_19549184.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3346]
gi|431770080|ref|ZP_19558483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1644]
gi|431774392|ref|ZP_19562700.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2369]
gi|431777053|ref|ZP_19565310.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2560]
gi|431779319|ref|ZP_19567514.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4389]
gi|431781360|ref|ZP_19569508.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6012]
gi|431784991|ref|ZP_19573026.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6045]
gi|447913350|ref|YP_007394762.1| Isoleucyl-tRNA synthetase [Enterococcus faecium NRRL B-2354]
gi|68196295|gb|EAN10724.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
gi|257813604|gb|EEV42362.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|257817416|gb|EEV44744.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|260075277|gb|EEW63590.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
gi|260079238|gb|EEW66929.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289162767|gb|EFD10618.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|291589002|gb|EFF20826.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
gi|291592439|gb|EFF24046.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
gi|291594662|gb|EFF26044.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
gi|291598778|gb|EFF29830.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
gi|313643552|gb|EFS08132.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
gi|364090059|gb|EHM32690.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4453]
gi|364093801|gb|EHM36037.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4452]
gi|378937789|gb|AFC62861.1| isoleucyl-tRNA synthetase [Enterococcus faecium Aus0004]
gi|388533234|gb|AFK58426.1| isoleucine--tRNA ligase [Enterococcus faecium DO]
gi|402918201|gb|EJX38915.1| isoleucine--tRNA ligase [Enterococcus faecium S447]
gi|402922117|gb|EJX42522.1| isoleucine--tRNA ligase [Enterococcus faecium V689]
gi|402924713|gb|EJX44905.1| isoleucine--tRNA ligase [Enterococcus faecium R501]
gi|402926491|gb|EJX46527.1| isoleucine--tRNA ligase [Enterococcus faecium R499]
gi|402928951|gb|EJX48757.1| isoleucine--tRNA ligase [Enterococcus faecium R496]
gi|402931320|gb|EJX50906.1| isoleucine--tRNA ligase [Enterococcus faecium R497]
gi|402934983|gb|EJX54276.1| isoleucine--tRNA ligase [Enterococcus faecium R494]
gi|402939561|gb|EJX58466.1| isoleucine--tRNA ligase [Enterococcus faecium R446]
gi|402947474|gb|EJX65682.1| isoleucine--tRNA ligase [Enterococcus faecium P1190]
gi|402949175|gb|EJX67256.1| isoleucine--tRNA ligase [Enterococcus faecium P1140]
gi|402950117|gb|EJX68132.1| isoleucine--tRNA ligase [Enterococcus faecium P1986]
gi|402958969|gb|EJX76250.1| isoleucine--tRNA ligase [Enterococcus faecium P1137]
gi|402961840|gb|EJX78835.1| isoleucine--tRNA ligase [Enterococcus faecium ERV99]
gi|402965064|gb|EJX81802.1| isoleucine--tRNA ligase [Enterococcus faecium ERV69]
gi|402972075|gb|EJX88300.1| isoleucine--tRNA ligase [Enterococcus faecium ERV38]
gi|402979119|gb|EJX94806.1| isoleucine--tRNA ligase [Enterococcus faecium ERV26]
gi|402981855|gb|EJX97362.1| isoleucine--tRNA ligase [Enterococcus faecium ERV165]
gi|402982848|gb|EJX98285.1| isoleucine--tRNA ligase [Enterococcus faecium ERV161]
gi|402988454|gb|EJY03461.1| isoleucine--tRNA ligase [Enterococcus faecium ERV102]
gi|402998605|gb|EJY12854.1| isoleucine--tRNA ligase [Enterococcus faecium E417]
gi|402999199|gb|EJY13401.1| isoleucine--tRNA ligase [Enterococcus faecium C621]
gi|403002019|gb|EJY16032.1| isoleucine--tRNA ligase [Enterococcus faecium E422]
gi|403008486|gb|EJY21990.1| isoleucine--tRNA ligase [Enterococcus faecium C1904]
gi|403011114|gb|EJY24443.1| isoleucine--tRNA ligase [Enterococcus faecium C497]
gi|403014743|gb|EJY27713.1| isoleucine--tRNA ligase [Enterococcus faecium 513]
gi|403016295|gb|EJY29119.1| isoleucine--tRNA ligase [Enterococcus faecium 515]
gi|403041999|gb|EJY52975.1| isoleucine--tRNA ligase [Enterococcus faecium 503]
gi|425723904|gb|EKU86790.1| isoleucyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
gi|430438595|gb|ELA49012.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0045]
gi|430441455|gb|ELA51552.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0120]
gi|430480942|gb|ELA58113.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0269]
gi|430481425|gb|ELA58581.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0333]
gi|430487810|gb|ELA64518.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0680]
gi|430491104|gb|ELA67586.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0688]
gi|430496202|gb|ELA72307.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1050]
gi|430534796|gb|ELA75231.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1185]
gi|430538447|gb|ELA78739.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1133]
gi|430540558|gb|ELA80760.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1258]
gi|430543219|gb|ELA83294.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1552]
gi|430543893|gb|ELA83945.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1392]
gi|430549012|gb|ELA88859.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1573]
gi|430550395|gb|ELA90191.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1574]
gi|430555595|gb|ELA95132.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1576]
gi|430559255|gb|ELA98614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1575]
gi|430560110|gb|ELA99416.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1578]
gi|430572645|gb|ELB11495.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1622]
gi|430572977|gb|ELB11812.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1620]
gi|430576452|gb|ELB15103.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1623]
gi|430581131|gb|ELB19578.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1627]
gi|430582642|gb|ELB21064.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1626]
gi|430584768|gb|ELB23082.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1634]
gi|430585670|gb|ELB23942.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1630]
gi|430599297|gb|ELB37008.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1904]
gi|430607077|gb|ELB44405.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2071]
gi|430610237|gb|ELB47389.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2134]
gi|430614747|gb|ELB51718.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2297]
gi|430620025|gb|ELB56828.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2883]
gi|430623672|gb|ELB60350.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3346]
gi|430634141|gb|ELB70276.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2369]
gi|430635833|gb|ELB71912.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1644]
gi|430639994|gb|ELB75848.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2560]
gi|430642174|gb|ELB77955.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4389]
gi|430648547|gb|ELB83953.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6045]
gi|430649721|gb|ELB85089.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6012]
gi|445189059|gb|AGE30701.1| Isoleucyl-tRNA synthetase [Enterococcus faecium NRRL B-2354]
Length = 932
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|304385164|ref|ZP_07367510.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
gi|304329358|gb|EFL96578.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
Length = 936
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 325/623 (52%), Gaps = 64/623 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+A+AE+E+EY D S S + +++ L + D + ++WTTTPW++PA++ I +
Sbjct: 194 SAMAEAEVEYH-DVTSPSAFYAERVSDGKGVLDQ---DTYFVVWTTTPWTIPASEGITID 249
Query: 478 PALEYSVASVKGAN---VIVAKCL---VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+YSV G + VI L E W D++ + GQ L++IT +HP +
Sbjct: 250 AGFDYSVVKPAGDDRKFVIATDRLSYATEQFGWQ---DVETIKTVRGQELENITALHPFD 306
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
+ R L ++ FV+ GTGLVH AP G+DDF + + + + ++G + +AGP
Sbjct: 307 SD-RKLVVMLGDFVTLDSGTGLVHTAPGFGEDDFGVGKEYGLDIFVPVDDRGYLTAEAGP 365
Query: 592 GLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
EG+ D + L+ ++ +L +Y HSYP+DWRTKKP+I +A+ QWF ++I
Sbjct: 366 DFEGV-FYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPIIFRATPQWFASVDKI 424
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEAN 708
+ + L L++V F+PE +K L + I R W ISRQRVWGVP+P+FY D T I+N
Sbjct: 425 RDQILDALKDVKFLPEWGQKRLHNMIRDRGDWVISRQRVWGVPLPIFYAEDGTPIMNGET 484
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
I+H L ++HG D W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 485 IEHVAELFEKHGSDIWFEWDAKDLLPEGYTSEHSPNGTFTKETDIMDVWFDSGSSHQGVL 544
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA + +EG DQ GWF SSL+TSVA+ AP++ V GF +D +G KMSKS
Sbjct: 545 AKRDYLKYPADLTLEGSDQYRGWFNSSLITSVAMSGHAPYKQVISQGFTLDGQGHKMSKS 604
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GN I DI KK+ G +++R WV + S
Sbjct: 605 LGNTIVPADII---KKM--------------------------GAEIIRLWVLSIDSS-S 634
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYVDV-----YMLKRLCEF 933
V + ++ D +KIR+++RYLL + +++ Y D+ YML R E
Sbjct: 635 DVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDPQANTVA-YADLQPEDRYMLVRFNEL 693
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y ++ + + L+N+++ +LSAFY KD +Y + + R S + I
Sbjct: 694 VKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFAKDVVYIEPEDSLKRRSMQTVFYQI 753
Query: 994 FHVLLRTVAPIMPHLAEEVYSHL 1016
L + + P++PH EE++ L
Sbjct: 754 LVGLTKLMTPVLPHTTEEIWQFL 776
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 230/398 (57%), Gaps = 21/398 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GHA+NKI KDI +R + G R YVPGWD HG
Sbjct: 42 QRQKLNEGKPSFVLHDGPPYANGNIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHG 101
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + RK +++AL+ ++ Q+ +F+ GV A+W+ N Y T
Sbjct: 102 LPIEQQLTKEGHDRKKMSTAEFRKLCRDYALKQVDKQREDFKRLGVAAEWD-NPYLTLQP 160
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
+ ++ F + + IYR KPV+WS SS +A+AE+E+EY D S S + +++
Sbjct: 161 SFEAEEIRTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEVEYH-DVTSPSAFYAERVSD 219
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCL--- 241
L + D + ++WTTTPW++PA++ I + +YSV G + VI L
Sbjct: 220 GKGVLDQ---DTYFVVWTTTPWTIPASEGITIDAGFDYSVVKPAGDDRKFVIATDRLSYA 276
Query: 242 VESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E W D+E + GQ L++IT +HP + + R L ++ FV+ GTGLVH AP
Sbjct: 277 TEQFGW---QDVETIKTVRGQELENITALHPFDSD-RKLVVMLGDFVTLDSGTGLVHTAP 332
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
G+DDF + + + + ++G + +AGP EG+ D + L+ ++ +L
Sbjct: 333 GFGEDDFGVGKEYGLDIFVPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALLK 391
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+Y HSYP+DWRTKKP+I +A+ QWF ++I+ + L
Sbjct: 392 QMDYTHSYPFDWRTKKPIIFRATPQWFASVDKIRDQIL 429
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILK 1167
+ ++G + +AGP EG+ + + L + L + +Y HSYP+DWRTKKP+I +
Sbjct: 353 VDDRGYLTAEAGPDFEGVFYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPIIFR 412
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF ++I+ + L L+ V F+PE +K L + I R W ISRQRVWGVP+P+FY
Sbjct: 413 ATPQWFASVDKIRDQILDALKDVKFLPEWGQKRLHNMIRDRGDWVISRQRVWGVPLPIFY 472
Query: 1228 DGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+N I+H L ++HG D W+ + LL
Sbjct: 473 AEDGTPIMNGETIEHVAELFEKHGSDIWFEWDAKDLL 509
>gi|422858978|ref|ZP_16905628.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1057]
gi|327458758|gb|EGF05106.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1057]
Length = 930
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/624 (33%), Positives = 323/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F TD+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWTDVQVLATYRGQELNHIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYHVGVANGLEVAVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
++++ F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIDKIKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVINRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERCQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L + F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEKEEF 778
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 224/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTSDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F TD++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWTDVQVLATYRGQELNHIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYHVGVANGLEVAVTVNERGIMMENAGPDFEG-QFYDKVVPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L ++ + F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIDKIKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|282916443|ref|ZP_06324205.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
gi|282319883|gb|EFB50231.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
Length = 917
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 321/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAIDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAIDLL 504
>gi|378835628|ref|YP_005204904.1| isoleucyl-tRNA synthetase [Mycoplasma hyorhinis GDL-1]
gi|367460413|gb|AEX13936.1| isoleucyl-tRNA synthetase [Mycoplasma hyorhinis GDL-1]
Length = 892
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 216/612 (35%), Positives = 329/612 (53%), Gaps = 52/612 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY DH S SIY+ +++Q + + +G + +IWTTTPW+L AN +A
Sbjct: 195 SALAEAEIEY-LDHRSPSIYVAFEISQGNSKVTKGD---YLVIWTTTPWTLIANSGVAVG 250
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
EYS + +VA LVE L F D ++V F G+ L D+ YI PI KE ++
Sbjct: 251 EKFEYSKVKHQDKFFVVATELVEKLAQEFNWDHFEIVDTFLGEKLVDVKYIRPIMKE-KE 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
K++ V+ + G+GLVH AP G+DDF ++ + + + + G + + EGL
Sbjct: 310 GKVVQGHHVTVASGSGLVHIAPLFGEDDFWISKKTGLEHVMHVNDDGTLN-ELARKYEGL 368
Query: 597 NILGDGKDQVLHL-VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
L K+ L E +L +HSYP+DWRT KPVI + + QWF+ E+IK E L
Sbjct: 369 FYLDANKEIGQDLEKEGKLLKFSILKHSYPHDWRTNKPVIYRGTPQWFVAIEKIKSEILK 428
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFC 713
EEV F E K+ L+ I R W ISRQR WGVPI VFYD + ++ +
Sbjct: 429 ASEEVIFPQEWIKRRLQTMIENRQDWTISRQRSWGVPIIVFYDENKNPVLDKPELFDYVI 488
Query: 714 TLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK---PAHV 770
L+ ++G D W+ V++LL N TK NDI+D+WFDSG + V DK P +
Sbjct: 489 NLVKQYGTDVWYEKEVDELLPEEYRNLGWTKENDIMDVWFDSGSTSISVKVDKTELPFDL 548
Query: 771 YMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQ 830
Y+EG DQ GWF SSL+ S + AP+R + HGF+VD+ G KMSKS GN +S D+
Sbjct: 549 YLEGSDQYRGWFNSSLINSYIYYNKAPYRRLLSHGFIVDQNGNKMSKSKGNGVSPLDL-- 606
Query: 831 GAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSS 890
+ YG D+LR WV+ + V K+I +
Sbjct: 607 ---------------------------IKTYGADILRLWVSNSEYFNDVV-YSKDIFEQN 638
Query: 891 QDDVQKIRSSLRYLLGVL----HNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQY 946
+ +KIR+++++L+ L HN + S+ +Y+D ++ +F+NT+ Y F++
Sbjct: 639 VEIYRKIRNTIKFLITNLEDYKHNPNLQLESVHQYID----NKIKKFKNTIIDNYDNFRF 694
Query: 947 ARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMP 1006
+ + NF++ + S FY ++ KD LY D ++ R + L+N+ +VL ++API+P
Sbjct: 695 VKIIKEANNFII-DFSNFYLSIAKDSLYTDKLDNPNRRQFQYNLYNLLNVLTISLAPILP 753
Query: 1007 HLAEEVYSHLPS 1018
EE+YS++ S
Sbjct: 754 TTTEEIYSYIKS 765
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 231/384 (60%), Gaps = 12/384 (3%)
Query: 19 PEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT 78
P+F+LHDGPPYANG HIGHA+NK+LKDI +R +QG YVPGWD HGLPIE K ++
Sbjct: 51 PQFVLHDGPPYANGDIHIGHALNKVLKDIVVRYKTMQGFYSPYVPGWDTHGLPIENKILS 110
Query: 79 SKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
+ K LS L++RK+A N+A E I +QK +FE +L D+ Y T + QL
Sbjct: 111 LNNISHKSLSVLELRKQANNYANEQIESQKKQFEQLNLLTDFS-TTYQTNAPTFEAKQLE 169
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG 195
F + ++D +YR LKPVYWSP+S++ALAE+E+EY DH S SIY+ +++Q + + +G
Sbjct: 170 LFKVMVQKDLVYRGLKPVYWSPTSQSALAEAEIEY-LDHRSPSIYVAFEISQGNSKVTKG 228
Query: 196 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD-IE 254
+ +IWTTTPW+L AN +A EYS + +VA LVE L F D E
Sbjct: 229 D---YLVIWTTTPWTLIANSGVAVGEKFEYSKVKHQDKFFVVATELVEKLAQEFNWDHFE 285
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
+V F G+ L D+ YI PI KE ++ K++ V+ + G+GLVH AP G+DDF ++
Sbjct: 286 IVDTFLGEKLVDVKYIRPIMKE-KEGKVVQGHHVTVASGSGLVHIAPLFGEDDFWISKKT 344
Query: 315 KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL-VEPDVLWTENYQHSYPYDWRT 373
+ + + + G + + EGL L K+ L E +L +HSYP+DWRT
Sbjct: 345 GLEHVMHVNDDGTLN-ELARKYEGLFYLDANKEIGQDLEKEGKLLKFSILKHSYPHDWRT 403
Query: 374 KKPVILKASQQWFIDTERIKPEAL 397
KPVI + + QWF+ E+IK E L
Sbjct: 404 NKPVIYRGTPQWFVAIEKIKSEIL 427
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 1151 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPY 1210
+HSYP+DWRT KPVI + + QWF+ E+IK E L E V F E K+ L+ I R
Sbjct: 394 KHSYPHDWRTNKPVIYRGTPQWFVAIEKIKSEILKASEEVIFPQEWIKRRLQTMIENRQD 453
Query: 1211 WCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
W ISRQR WGVPI VFYD + ++ + L+ ++G D W+ V++LL
Sbjct: 454 WTISRQRSWGVPIIVFYDENKNPVLDKPELFDYVINLVKQYGTDVWYEKEVDELLPEEYR 513
Query: 1269 NSNVTKSN 1276
N TK N
Sbjct: 514 NLGWTKEN 521
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1089
SIAK LY D ++ R + L+N+ +VL ++API+P EE+YS++ S
Sbjct: 714 SIAKDSLYTDKLDNPNRRQFQYNLYNLLNVLTISLAPILPTTTEEIYSYIKS 765
>gi|344304064|gb|EGW34313.1| hypothetical protein SPAPADRAFT_54466 [Spathaspora passalidarum NRRL
Y-27907]
Length = 968
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 221/630 (35%), Positives = 330/630 (52%), Gaps = 56/630 (8%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD--------LHALIWTTTPWSL 468
GTALAE+ELEY +H S +I++K + V +L E + + LIWT+TPW++
Sbjct: 205 GTALAEAELEYNDNHTSVAIHVKFPV--VSENLYEYIKNNYQKTIEKIQLLIWTSTPWTI 262
Query: 469 PANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
PAN+ + N + Y++ + ++VAK LVE++ + PG L TY +
Sbjct: 263 PANRAVCVNEHMTYTLITNNSEYLVVAKPLVEHVLSLNSDYKQTNVEIPGSVLVGNTYTN 322
Query: 529 PINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY-SP 587
P +K+ + +L V + GTGLVH APAHG++D+L+A + + ++I GK
Sbjct: 323 PGSKKDQQYPVLHGDHVVDNAGTGLVHNAPAHGREDYLVAKKYDLSIDSVIDEAGKLVEA 382
Query: 588 DAGPGLEGLN--ILGDGKDQVLH---LVEPDVLW--TENYQHSYPYDWRTKKPVILKASQ 640
PG + L + + K V+ L E ++L+ + ++HSYPYDWR+K PV+ +A+
Sbjct: 383 TLAPGFQSLAGFKVTEPKTNVICANILAENNMLFHINKKFKHSYPYDWRSKTPVVQRATP 442
Query: 641 QWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 700
QWF++ ++IKP AL + +V FVPE+ K L I R WCISRQRVWGVP+P+ Y+
Sbjct: 443 QWFVNVDKIKPLALEAISKVKFVPETGKHRLASFIENRSEWCISRQRVWGVPLPLIYNKH 502
Query: 701 T--IIVNEANIKHFCTLIDEHGPDFWW-----------SLSVEQLLNTSDVN-SNVTKSN 746
T +++ A + + +DE+G D W+ S S L +N ++ K
Sbjct: 503 TNEPVLDLAVVDYLIGRLDENGTDQWFVDEVDISRWLPSESESAELGIPFINGADYYKGK 562
Query: 747 DILDIWFDSGISWSHVL-KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHG 805
D +D+WFDSG SWS + +D+PA +Y+EG DQ GWF SSLL V ++APF++V HG
Sbjct: 563 DTMDVWFDSGTSWSTLENQDEPADIYLEGSDQHRGWFQSSLLNKVITSNSAPFKSVITHG 622
Query: 806 FVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDV 865
F+ D KG KMSKS+GNV S + +G KK + P G D
Sbjct: 623 FITDGKGQKMSKSLGNVFSPQEAIEGCKK---------------------PRTPYLGPDG 661
Query: 866 LRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY-VDV 924
LR WVA+ K V +L + +K R + +YLLG L++ E +D
Sbjct: 662 LRTWVASSNYKS-DVNFSPEVLTRVSEISKKYRVTFKYLLGNLYDRGEPVAYEELADLDK 720
Query: 925 YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARL 984
+ L L + Q Y E ++R L V + LSA YF + KD LY D + R
Sbjct: 721 FTLHSLYKLQQECVDFYQEHNFSRVMNSLNLHVNSMLSAIYFDISKDCLYTDKKDSLKRR 780
Query: 985 SGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
S L I + +API P L +EV++
Sbjct: 781 SIQTVLDKILVTYIGLLAPIQPLLTQEVWT 810
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 242/413 (58%), Gaps = 29/413 (7%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKR-VHYVPG 64
+LY+WQ E + K F+LHDGPPYANG H+GHA+NKI KDI R L+ + Y PG
Sbjct: 52 DLYAWQSEHNSDKKPFVLHDGPPYANGDLHLGHALNKICKDIINRFQLIHNNALIKYRPG 111
Query: 65 WDCHGLPIELKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHT 124
WDCHGLPIE+K + + PL+IR+ ++ A I+ Q+ +F + ++ D+ Y T
Sbjct: 112 WDCHGLPIEMK-VNPHQTIRDPLEIRQACRDLATTMIDRQRQQFLQYAIMTDFT-TPYIT 169
Query: 125 FDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIK 184
D Y NQL F L ++ + R LKPV+W + TALAE+ELEY +H S +I++K
Sbjct: 170 MDHSYEINQLKVFKKLMERGLLSRQLKPVWWGCDTGTALAEAELEYNDNHTSVAIHVKFP 229
Query: 185 LNQVPAHLLEGATD--------LHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVI 236
+ V +L E + + LIWT+TPW++PAN+ + N + Y++ + ++
Sbjct: 230 V--VSENLYEYIKNNYQKTIEKIQLLIWTSTPWTIPANRAVCVNEHMTYTLITNNSEYLV 287
Query: 237 VAKCLVE---SLKWTF-QTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
VAK LVE SL + QT++E+ PG L TY +P +K+ + +L V +
Sbjct: 288 VAKPLVEHVLSLNSDYKQTNVEI----PGSVLVGNTYTNPGSKKDQQYPVLHGDHVVDNA 343
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY-SPDAGPGLEGLN--ILGDGKDQV 349
GTGLVH APAHG++D+L+A + + ++I GK PG + L + + K V
Sbjct: 344 GTGLVHNAPAHGREDYLVAKKYDLSIDSVIDEAGKLVEATLAPGFQSLAGFKVTEPKTNV 403
Query: 350 LH---LVEPDVLW--TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ L E ++L+ + ++HSYPYDWR+K PV+ +A+ QWF++ ++IKP AL
Sbjct: 404 ICANILAENNMLFHINKKFKHSYPYDWRSKTPVVQRATPQWFVNVDKIKPLAL 456
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 82/131 (62%), Gaps = 10/131 (7%)
Query: 1127 NILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALAC 1186
NIL E + + H+ + ++HSYPYDWR+K PV+ +A+ QWF++ ++IKP AL
Sbjct: 407 NILAEN-NMLFHI-------NKKFKHSYPYDWRSKTPVVQRATPQWFVNVDKIKPLALEA 458
Query: 1187 LEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCT 1244
+ V FVPE+ K L I R WCISRQRVWGVP+P+ Y+ T +++ A + +
Sbjct: 459 ISKVKFVPETGKHRLASFIENRSEWCISRQRVWGVPLPLIYNKHTNEPVLDLAVVDYLIG 518
Query: 1245 LIDEHGPDFWW 1255
+DE+G D W+
Sbjct: 519 RLDENGTDQWF 529
>gi|422853764|ref|ZP_16900428.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK160]
gi|325697075|gb|EGD38962.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK160]
Length = 930
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 322/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F D+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWADVQVLATYRGQELNHIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVTPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYEELRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R +++ + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDVLVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L + F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEEEEF 778
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWADVQVLATYRGQELNHIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFAG-QFYDKVTPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVTPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|257890202|ref|ZP_05669855.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257826562|gb|EEV53188.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
Length = 930
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 189 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 244
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 245 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 302
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 303 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 361
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 362 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 420
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 421 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 479
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 480 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 539
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 540 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 599
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 600 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 629
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 630 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 689
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 690 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 749
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 750 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 787
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 32 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 91
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 92 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 150
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 151 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 209
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 210 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 266
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 267 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 324
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 325 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 382
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 383 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 420
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 345 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 402
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 403 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 462
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 463 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 500
>gi|257081256|ref|ZP_05575617.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
gi|256989286|gb|EEU76588.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
Length = 933
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 334/624 (53%), Gaps = 61/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH-LLEGATDLHALIWTTTPWSLPANQFIAF 476
++LAE+E+EYK D S SIY + N V LL+ T +IWTTTPW+LPAN I+
Sbjct: 198 SSLAEAEIEYK-DVKSPSIY--VAFNVVDGKGLLDNETAF--VIWTTTPWTLPANLGISV 252
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 253 NPDFTYVEVKADGRKFVIAKDLLATVKEAISWEEVEVLREFSGEKLDRMTAQHPFY--DR 310
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG
Sbjct: 311 TSLVMIGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEG 369
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ + L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + +
Sbjct: 370 I-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDI 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 429 LDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEH 487
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 488 VANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRER 547
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 548 EELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGN 607
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I LP EK + + G D+LR WV++ + V
Sbjct: 608 TI-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVR 637
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNT 936
+ +ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 638 VSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEI 697
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R +
Sbjct: 698 RENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVS 757
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQ 1020
L + + PI+PH AEE++S L +
Sbjct: 758 LTKLLTPIIPHTAEEIWSFLQEEE 781
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 237/394 (60%), Gaps = 17/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY + N
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIY--VAFNV 221
Query: 188 VPAH-LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
V LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 222 VDGKGLLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVK 279
Query: 247 WTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+
Sbjct: 280 EAISWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMIGDHVTLDAGTGLVHTAPGHGE 337
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 338 DDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFF 395
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 396 THSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|55820807|ref|YP_139249.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55822708|ref|YP_141149.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
gi|418027557|ref|ZP_12666190.1| Isoleucine--tRNA ligase [Streptococcus thermophilus CNCM I-1630]
gi|81820317|sp|Q5M0C5.1|SYI_STRT1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|81820480|sp|Q5M4X2.1|SYI_STRT2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|55736792|gb|AAV60434.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55738693|gb|AAV62334.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
gi|354691641|gb|EHE91559.1| Isoleucine--tRNA ligase [Streptococcus thermophilus CNCM I-1630]
Length = 929
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/621 (33%), Positives = 324/621 (52%), Gaps = 62/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G IVA L+ +L F +++V+ + G L I HP + E
Sbjct: 247 ADIEYVLVKPAGETRKFIVASELLNSLSEKFAWEEVEVLNTYRGDELNQIVTEHPWDSEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + +G +AGP
Sbjct: 307 DELVIL-GEHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVVVTVNERGIMMENAGP--- 362
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
+ G D+V +V + L E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 363 --DFAGKFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
E L +E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I
Sbjct: 421 QEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDRTPIMTEETI 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L +EHG WW + LL + N TK NDI+D+WFDSG SW+ V+
Sbjct: 481 EHVAKLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVVV 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++P A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+
Sbjct: 541 NRPELTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ D+ + +G ++LR WV + + +
Sbjct: 601 GNTIAPSDVEK-----------------------------QFGAEILRLWVTSVDTSN-D 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V I +IL+ + +KIR++LR+L+ + + +T +++ R VD YM R +
Sbjct: 631 VRISMDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVK 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F++ + L+NF+ ELSAFY KD +Y +S R ++I
Sbjct: 691 NIRDAYENFEFLTIYKSLVNFINVELSAFYLDFAKDVVYIESAKSLERRQMQTVFYDILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
+ + + PI+PH AEE++S+L
Sbjct: 751 KITKLLTPILPHTAEEIWSYL 771
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 225/402 (55%), Gaps = 20/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G ++PG
Sbjct: 34 AKVYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G IVA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGETRKFIVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F ++EV+ + G L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFAWEEVEVLNTYRGDELNQIVTEHPWDSEVDELVIL-GEHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--- 356
AP G+DD+ + +A + V+ + +G +AGP + G D+V +V
Sbjct: 328 APGFGEDDYNVGVANGLEVVVTVNERGIMMENAGP-----DFAGKFYDKVAPIVMEKLGD 382
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 383 LLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 10/160 (6%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP + G+ D+V +V + L E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGP-----DFAGKFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E V F E K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY D T I+ E I+H L +EHG WW + LL
Sbjct: 465 IFYAEDRTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|26554335|ref|NP_758269.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
gi|81747446|sp|Q8EUN9.1|SYI_MYCPE RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|26454344|dbj|BAC44673.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
Length = 900
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 216/641 (33%), Positives = 347/641 (54%), Gaps = 56/641 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALA++E+ Y+ D S SIY+ +++ + +G +IWTTTPW+LP+N IA N
Sbjct: 193 TALADAEIIYQ-DVESDSIYVSLEILDKNEFVSKGD---KVIIWTTTPWTLPSNLAIAAN 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P + Y V+ + +++K LVE L T + T+ +++ +F G+ L+++ Y PI+ +
Sbjct: 249 PKVTYCRVQVENSVYVISKNLVEKLAETLEWTNYEILSEFSGKKLENLPYKSPIS--DKK 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG-LEG 595
K++ G+VS S GTGLVH AP G +D+L I I N GK++ + L G
Sbjct: 307 CKIIVDGYVSDSDGTGLVHNAPGFGHEDYLACKKYNIKPYCPIDNLGKFTGEVNDKELAG 366
Query: 596 LNILGDGKDQVLH--LVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
L D ++ + +L + HS +DWRTKKPVI +A++QWF++ ++I E
Sbjct: 367 L-FYKDANPIIIERLAKKKLLLKASKFTHSAAHDWRTKKPVIYRATKQWFVNIDKISKEI 425
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
+A L +V + + K +++ + R WCISRQR+WGVPI + YD D I++ + +
Sbjct: 426 VAALNKVKSIDNTIIKKIKEMVLNRQEWCISRQRIWGVPICIIYDKDYNPILDPKLLNNI 485
Query: 713 CTLIDEHGPDFWWSLSVEQLLNTS-DVNSNVTKSNDILDIWFDSGISWSHVLKDK---PA 768
++++ G + W++ + L S + + K DI+D+WFDSG S+S + DK PA
Sbjct: 486 VDILNDEGINAWYNEDAKYFLTDSYNTSKKYIKETDIMDVWFDSGTSYSVLQADKLGYPA 545
Query: 769 HVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDI 828
+Y EG DQ GWF SSL+TSVA +P++ + HGFV+DE G KMSKS+GN+I +
Sbjct: 546 DLYFEGKDQFRGWFNSSLITSVAAFKKSPYKELLTHGFVLDENGNKMSKSLGNIIDPLQV 605
Query: 829 TQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTVPIGKNIL 887
+ YG DVLR WVA+ SKD V I K+I+
Sbjct: 606 CK-----------------------------EYGADVLRLWVASVDFSKD--VSISKDII 634
Query: 888 NSSQDDVQKIRSSL-RYLLGVLH--NHSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEF 944
+ + ++IR++L R++LG L+ N + G+ D+Y+L L T+ Y ++
Sbjct: 635 AQNAELYRRIRNTLFRFILGNLNGFNLKKLRGAKYSEADLYVLSCLSNDIKTIKACYDKY 694
Query: 945 QYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPI 1004
+ + +++ V +LS++YF +KD LYC+ + E R++ TL+ + LR +API
Sbjct: 695 DFKQIVKIVSKNVA-DLSSWYFDYIKDPLYCEKEDNEQRIAIQATLYQLLDSYLRILAPI 753
Query: 1005 MPHLAEEVYSHLPSRQGTFS----SFCHFKVYLQYSGSIAK 1041
+PH EE Y + S F +FK+ +Y K
Sbjct: 754 IPHTCEEAYEFFDKKDKQKSVHLEGFTNFKIDSKYKVDFKK 794
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 225/384 (58%), Gaps = 15/384 (3%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE---LKAI 77
FI+ DGPPYANG H GHA+NKILKDI LR G Y+PGWD HGLPIE K
Sbjct: 51 FIIADGPPYANGDLHTGHALNKILKDIILRFKASVGFYTKYIPGWDTHGLPIEQEMAKRG 110
Query: 78 TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
+K+ + + RK KNFA+E + Q+ +F G+L++ + Y T D +YV Q+ F
Sbjct: 111 LNKNANQTITEKRKNCKNFAIENVYKQRDQFRRLGILSEMDE-IYVTCDLDYVIRQIKIF 169
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEGAT 197
+ + IY+DLKPVYWS SS+TALA++E+ Y+ D S SIY+ +++ + +G
Sbjct: 170 NKMLSKGLIYQDLKPVYWSWSSQTALADAEIIYQ-DVESDSIYVSLEILDKNEFVSKGD- 227
Query: 198 DLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQ-TDIEVV 256
+IWTTTPW+LP+N IA NP + Y V+ + +++K LVE L T + T+ E++
Sbjct: 228 --KVIIWTTTPWTLPSNLAIAANPKVTYCRVQVENSVYVISKNLVEKLAETLEWTNYEIL 285
Query: 257 CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI 316
+F G+ L+++ Y PI+ + K++ G+VS S GTGLVH AP G +D+L I
Sbjct: 286 SEFSGKKLENLPYKSPIS--DKKCKIIVDGYVSDSDGTGLVHNAPGFGHEDYLACKKYNI 343
Query: 317 PVLNLITNQGKYSPDAGPG-LEGLNILGDGKDQVLH--LVEPDVLWTENYQHSYPYDWRT 373
I N GK++ + L GL D ++ + +L + HS +DWRT
Sbjct: 344 KPYCPIDNLGKFTGEVNDKELAGL-FYKDANPIIIERLAKKKLLLKASKFTHSAAHDWRT 402
Query: 374 KKPVILKASQQWFIDTERIKPEAL 397
KKPVI +A++QWF++ ++I E +
Sbjct: 403 KKPVIYRATKQWFVNIDKISKEIV 426
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HS +DWRTKKPVI +A++QWF++ ++I E +A L V + + K +++ + R
Sbjct: 392 FTHSAAHDWRTKKPVIYRATKQWFVNIDKISKEIVAALNKVKSIDNTIIKKIKEMVLNRQ 451
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
WCISRQR+WGVPI + YD D I++ + + ++++ G + W++ + L S
Sbjct: 452 EWCISRQRIWGVPICIIYDKDYNPILDPKLLNNIVDILNDEGINAWYNEDAKYFLTDS 509
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 21/161 (13%)
Query: 946 YARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIM 1005
Y R L F++ L+ F ++ Y EA L L L N + A
Sbjct: 641 YRRIRNTLFRFILGNLNGFNLKKLRGAKY-----SEADLYVLSCLSNDIKTI---KACYD 692
Query: 1006 PHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSIAKRILYCDSINGEARLSGLHTLHNIF 1065
+ +++ + SS+ Y Y K LYC+ + E R++ TL+ +
Sbjct: 693 KYDFKQIVKIVSKNVADLSSW-----YFDY----IKDPLYCEKEDNEQRIAIQATLYQLL 743
Query: 1066 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFS----SFCHFKV 1102
LR +API+PH EE Y + S F +FK+
Sbjct: 744 DSYLRILAPIIPHTCEEAYEFFDKKDKQKSVHLEGFTNFKI 784
>gi|445375293|ref|ZP_21426484.1| isoleucyl-tRNA ligase [Streptococcus thermophilus MTCC 5460]
gi|445389780|ref|ZP_21428201.1| isoleucyl-tRNA ligase [Streptococcus thermophilus MTCC 5461]
gi|444750268|gb|ELW75095.1| isoleucyl-tRNA ligase [Streptococcus thermophilus MTCC 5461]
gi|444750375|gb|ELW75193.1| isoleucyl-tRNA ligase [Streptococcus thermophilus MTCC 5460]
Length = 929
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/621 (33%), Positives = 324/621 (52%), Gaps = 62/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+EY + G IVA L+ +L F +++V+ + G L I HP + E
Sbjct: 247 ADIEYVLVKPAGETRKFIVASELLNSLSEKFAWEEVEVLNTYRGDELNQIVTEHPWDSEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V+ + +G +AGP
Sbjct: 307 DELVIL-GEHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVVVTVNERGIMMENAGP--- 362
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
+ G D+V +V + L E HSYP+DWRTKKP+I +A QWF + +
Sbjct: 363 --DFAGKFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANI 709
E L +E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I
Sbjct: 421 QEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDRTPIMTEETI 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H L +EHG WW + LL + N TK NDI+D+WFDSG SW+ V+
Sbjct: 481 EHVAKLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVVV 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++P A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+
Sbjct: 541 NRPELTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ D+ + +G ++LR WV + + +
Sbjct: 601 GNTIAPSDVEK-----------------------------QFGAEILRLWVTSVDTSN-D 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V I +IL+ + +KIR++LR+L+ + + +T +++ R VD YM R +
Sbjct: 631 VRISMDILSQVSESYRKIRNTLRFLIANTSDFNPTTDAVAFEDLRSVDQYMTIRFNQLVK 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F++ + L+NF+ ELSAFY KD +Y +S R ++I
Sbjct: 691 NIRDAYENFEFLTIYKSLVNFINVELSAFYLDFAKDVVYIESAKSLERRQMQTVFYDILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
+ + + PI+PH AEE++S+L
Sbjct: 751 KITKLLTPILPHTAEEIWSYL 771
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 225/402 (55%), Gaps = 20/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G ++PG
Sbjct: 34 AKVYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L + K +++AL ++ Q+ +F+ GV ADWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDRAEYLKMCRDYALSQVDKQREDFKRLGVSADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIY+ KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYQGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + +EY + G IVA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIEYVLVKPAGETRKFIVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F ++EV+ + G L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFAWEEVEVLNTYRGDELNQIVTEHPWDSEVDELVIL-GEHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--- 356
AP G+DD+ + +A + V+ + +G +AGP + G D+V +V
Sbjct: 328 APGFGEDDYNVGVANGLEVVVTVNERGIMMENAGP-----DFAGKFYDKVAPIVMEKLGD 382
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 383 LLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 10/160 (6%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP + G+ D+V +V + L E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGP-----DFAGKFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + E L +E V F E K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY D T I+ E I+H L +EHG WW + LL
Sbjct: 465 IFYAEDRTPIMTEETIEHVAKLFEEHGSVIWWERDAKDLL 504
>gi|307249243|ref|ZP_07531240.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306858767|gb|EFM90826.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
Length = 938
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 349/666 (52%), Gaps = 70/666 (10%)
Query: 389 TERIKPEALVCKTVGNILGRVGI-THDRP-------GTALAESELEYKPDHISKSIYLKI 440
T EA + +T+G ++ + +P G++LAE+E+EY+ D +S SIY++
Sbjct: 156 TMNFDTEAHIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYE-DKVSPSIYVRF 214
Query: 441 KLNQVPA------HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 494
K A + +G+ + A+IWTTTPW+LP+N+ I+ NP +Y + V++
Sbjct: 215 KAIDSAAVEAKFKAVGKGSGQISAVIWTTTPWTLPSNKAISINPEFDYQLVQFGDERVVL 274
Query: 495 AKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 553
K LVE+++ + ++V+ + G L+ + + HP + L+ V++ GTGL
Sbjct: 275 VKDLVESVQKAVGVESVEVLGEVKGDALELMQFQHPFY--DYSVPLILGDHVTTDGGTGL 332
Query: 554 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 613
VH AP HGQDDF+++ I + L+ N GK+ P GL + + + L E
Sbjct: 333 VHTAPDHGQDDFVVSKKYNIEMAGLVANDGKFISST-PFFAGLGVFESNEKVLEKLKEVG 391
Query: 614 VLWT-ENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLEEVNFVPESAKKT 670
L E +HSYP+ WR K P+I +A+ QWFI +T+ ++ +AL ++ V ++P +
Sbjct: 392 ALLKLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEAR 451
Query: 671 LRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEANIKHFCTL---IDEHGPDFWWSL 727
+ +A RP WCISRQR WGVP+ +F +T ++ ++ ++ ++E G WW L
Sbjct: 452 IDTMVANRPDWCISRQRTWGVPMTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDL 511
Query: 728 SVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP------AHVYMEGMDQINGW 781
++L D N K D LD+WFDSG +++ V++ +P +Y+EG DQ GW
Sbjct: 512 DPVEVLGEEDAK-NYRKVPDTLDVWFDSGSTYASVVEARPEFNGNSTDMYLEGSDQHRGW 570
Query: 782 FMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKS 841
FMSSL+ S A AP++ V HGFVVDEKG KMSKS+GNVI ++ + K+
Sbjct: 571 FMSSLMLSTATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEV---------WNKN 621
Query: 842 VGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT--VPIGKNILNSSQDDVQKIRS 899
G D+LR WV AS D T + + NILNS+ + ++IR+
Sbjct: 622 --------------------GADILRLWV---ASTDYTGEIAVSHNILNSAGESYRRIRN 658
Query: 900 SLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLN 955
+ R+LL L+ + +D + + E QN + Y +Q+ + L+
Sbjct: 659 TARFLLANLNGFDPKRDLVKPEEMIALDRWAVSCALEAQNDIKEAYDNYQFHTVVQRLMR 718
Query: 956 FVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSH 1015
F E+ +FY ++KDR Y + AR S L +I L+R +API+ A+E++S+
Sbjct: 719 FCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTADEIWSY 778
Query: 1016 LPSRQG 1021
LP +G
Sbjct: 779 LPQVEG 784
Score = 273 bits (697), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 233/404 (57%), Gaps = 18/404 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY RE+ GK FILHDGPPYANG HIGHAVNKILKDI ++S G YVPGWD
Sbjct: 37 LYQKVRESSKGKKSFILHDGPPYANGNIHIGHAVNKILKDIIMKSKTALGFDTPYVPGWD 96
Query: 67 CHGLPIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK + ++ +S + R+ +++A E + QKA+F G+L DW+ N Y
Sbjct: 97 CHGLPIELKVEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWD-NPYL 155
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + + + + + ++Y+ KPV+W ++LAE+E+EY+ D VS SIY++
Sbjct: 156 TMNFDTEAHIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYE-DKVSPSIYVRF 214
Query: 184 KLNQVPA------HLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 237
K A + +G+ + A+IWTTTPW+LP+N+ I+ NP +Y + V++
Sbjct: 215 KAIDSAAVEAKFKAVGKGSGQISAVIWTTTPWTLPSNKAISINPEFDYQLVQFGDERVVL 274
Query: 238 AKCLVESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
K LVES++ + +EV+ + G L+ + + HP + L+ V++ GTGL
Sbjct: 275 VKDLVESVQKAVGVESVEVLGEVKGDALELMQFQHPFY--DYSVPLILGDHVTTDGGTGL 332
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP HGQDDF+++ I + L+ N GK+ + P GL + + + L E
Sbjct: 333 VHTAPDHGQDDFVVSKKYNIEMAGLVANDGKFI-SSTPFFAGLGVFESNEKVLEKLKEVG 391
Query: 357 VLWT-ENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEAL 397
L E +HSYP+ WR K P+I +A+ QWFI +T+ ++ +AL
Sbjct: 392 ALLKLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLREQAL 435
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEP--DVLWTENYQHSYPYDWRTKKPV 1164
L+ N GK+ P GL + E ++VL ++ +L E +HSYP+ WR K P+
Sbjct: 356 GLVANDGKFISST-PFFAGLGVF-ESNEKVLEKLKEVGALLKLERIKHSYPHCWRHKTPI 413
Query: 1165 ILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
I +A+ QWFI +T+ ++ +AL ++ V ++P + + +A RP WCISRQR WGVP
Sbjct: 414 IFRATPQWFIGMETQGLREQALGEIKSVRWIPSWGEARIDTMVANRPDWCISRQRTWGVP 473
Query: 1223 IPVFYDGDTIIVNEANIKHFCTL---IDEHGPDFWWSL-PVEQL 1262
+ +F +T ++ ++ ++ ++E G WW L PVE L
Sbjct: 474 MTMFVHNETEELHPRTLEILESVAKRVEEKGIQAWWDLDPVEVL 517
>gi|257893530|ref|ZP_05673183.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|257829909|gb|EEV56516.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
Length = 930
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 189 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 244
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 245 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 302
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 303 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 361
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 362 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 420
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 421 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 479
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 480 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 539
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 540 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 599
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 600 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 629
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 630 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 689
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 690 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 749
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 750 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 787
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 32 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 91
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 92 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 150
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 151 VTLDPSYEAAQVRVFGKMAEKSYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 209
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 210 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 266
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 267 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 324
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 325 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 382
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 383 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 420
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 345 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 402
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 403 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 462
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 463 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 500
>gi|425007881|ref|ZP_18418996.1| isoleucine--tRNA ligase [Enterococcus faecium ERV1]
gi|402994306|gb|EJY08849.1| isoleucine--tRNA ligase [Enterococcus faecium ERV1]
Length = 932
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (750), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYGAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|225181686|ref|ZP_03735126.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225167667|gb|EEG76478.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 914
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 204/622 (32%), Positives = 335/622 (53%), Gaps = 55/622 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
TALAE+E+EY +H S SIY++ + + + ++ +IWTTTPW++PAN I+ +
Sbjct: 195 TALAEAEIEYA-EHKSPSIYVRFNVTDAKGKIAD-PENVWFVIWTTTPWTIPANLAISLH 252
Query: 478 PALEY-SVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQR 535
P Y V + K ++I+A+ L ++ TF+ T +VV + G+ L+ I HP+ R
Sbjct: 253 PDFTYVRVRTPKHGDLILAEELFGDVMETFEITGYEVVAKYKGKELEGIVCKHPLY--DR 310
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ ++ V+ GTG VH AP HGQ+D+ + L + + + + G+++ +AGP G
Sbjct: 311 ESVVVLGEHVTLEAGTGCVHTAPGHGQEDYEVGLRYGLDIFAPMDHAGRFTQEAGP-FAG 369
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
L+ +G +V +E + +L +H YP+ WR K+PV+ +A++QWF E + +A
Sbjct: 370 LH-YNEGNKRVSQALEEEGALLSLSFLKHPYPHCWRCKEPVLFRATEQWFASVEGFRKQA 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +++V ++P ++ + + I R WCISRQRVWGVPIP+FY + ++N+ IK
Sbjct: 429 LEAIKDVKWIPAWGEERIHNMIVDRHDWCISRQRVWGVPIPIFYCTSCNKELINKETIKA 488
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDV----NSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L + G D W++ ++L ++ K +DI+D+WFDSG + VL+ P
Sbjct: 489 VSELFAKEGSDAWFAREANEILPAGTTCGCGHNEFRKESDIMDVWFDSGSTHVAVLETNP 548
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SSLLTSVA + AP+++ HG+VVD +G KMSKS+GNV
Sbjct: 549 DLTSPADLYLEGSDQYRGWFQSSLLTSVATRDRAPYKSTLTHGWVVDGEGKKMSKSLGNV 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
++ I + YG D+LR WV++ + V +
Sbjct: 609 VAPEHI-----------------------------IKQYGADILRLWVSSTDFRS-DVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
++IL + +KIR+++RY+LG H+ + ++S +D Y L RL +
Sbjct: 639 SQDILKQLAEVYRKIRNTIRYMLGNCHDFNPQAHALSYDALDELDRYALHRLQVLVERVS 698
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +F++ + NF V E+S FY ++KDRLY R S +H I L
Sbjct: 699 GAYDDFEFHVVFHAIHNFCVIEMSNFYMDVLKDRLYTSPAASPGRRSAQTVMHEILVTLT 758
Query: 999 RTVAPIMPHLAEEVYSHLPSRQ 1020
+ +AP++ +EEV+ +LP +
Sbjct: 759 KLIAPVLTFTSEEVWGYLPGEK 780
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 235/400 (58%), Gaps = 14/400 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+++Y R + GK +++LHDGPPYANG H+GHA+NK+LKDI ++ + G YVPG
Sbjct: 37 TDIYQKVRNSRQGKEKYVLHDGPPYANGDIHMGHALNKVLKDIIVKHKSMSGFDSPYVPG 96
Query: 65 WDCHGLPIELKAITS---KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE + + K ++PL+ R+ +++AL ++ Q+ +F+ GV DW+ N
Sbjct: 97 WDTHGLPIEHQVVKKGKVKRNEVTPLEFRRHCRDYALRFLDIQREQFKRLGVRGDWD-NP 155
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T E+ Q+ F + + YIY+ LKPV+W P TALAE+E+EY +H S SIY+
Sbjct: 156 YVTLKPEFEARQIEVFGEMANKGYIYKGLKPVHWCPQCETALAEAEIEYA-EHKSPSIYV 214
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEY-SVASVKGANVIVAKC 240
+ + + + ++ +IWTTTPW++PAN I+ +P Y V + K ++I+A+
Sbjct: 215 RFNVTDAKGKIAD-PENVWFVIWTTTPWTIPANLAISLHPDFTYVRVRTPKHGDLILAEE 273
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L + TF+ T EVV + G+ L+ I HP+ R+ ++ V+ GTG VH
Sbjct: 274 LFGDVMETFEITGYEVVAKYKGKELEGIVCKHPLY--DRESVVVLGEHVTLEAGTGCVHT 331
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--V 357
AP HGQ+D+ + L + + + + G+++ +AGP GL+ +G +V +E + +
Sbjct: 332 APGHGQEDYEVGLRYGLDIFAPMDHAGRFTQEAGP-FAGLH-YNEGNKRVSQALEEEGAL 389
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L +H YP+ WR K+PV+ +A++QWF E + +AL
Sbjct: 390 LSLSFLKHPYPHCWRCKEPVLFRATEQWFASVEGFRKQAL 429
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ + G+++ +AGP GL+ EG +V +E + +L +H YP+ WR K+PV+
Sbjct: 354 MDHAGRFTQEAGP-FAGLH-YNEGNKRVSQALEEEGALLSLSFLKHPYPHCWRCKEPVLF 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A++QWF E + +AL ++ V ++P ++ + + I R WCISRQRVWGVPIP+F
Sbjct: 412 RATEQWFASVEGFRKQALEAIKDVKWIPAWGEERIHNMIVDRHDWCISRQRVWGVPIPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y + ++N+ IK L + G D W++ ++L
Sbjct: 472 YCTSCNKELINKETIKAVSELFAKEGSDAWFAREANEIL 510
>gi|430826929|ref|ZP_19445097.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0164]
gi|431765943|ref|ZP_19554442.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4215]
gi|430444475|gb|ELA54313.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0164]
gi|430627386|gb|ELB63888.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4215]
Length = 932
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (750), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|408792230|ref|ZP_11203840.1| isoleucine--tRNA ligase [Leptospira meyeri serovar Hardjo str. Went
5]
gi|408463640|gb|EKJ87365.1| isoleucine--tRNA ligase [Leptospira meyeri serovar Hardjo str. Went
5]
Length = 913
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 215/630 (34%), Positives = 334/630 (53%), Gaps = 65/630 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
TA AE+E+EY+ +H+S SIY+K + +G D + LIWTTTPW+LPAN I F
Sbjct: 198 ATAHAEAEIEYQ-NHVSPSIYVKFAV--------KGENDTYCLIWTTTPWTLPANLAICF 248
Query: 477 NPALEYSV-ASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
N L+YS+ S +I+A L E+++ + + L+ +T++HP +R
Sbjct: 249 NEELDYSLFQSDTHGRLILADGLKESVEQKTGITLTKIKSLSSADLKQMTFLHPFI--ER 306
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L V+ GTG VH AP HG DD+ + A +P L+ + + G+Y+ D ++G
Sbjct: 307 ESIPLFGNHVTLDAGTGCVHTAPGHGTDDYRVGTAAGLPPLSPVDDYGRYT-DEFEMMKG 365
Query: 596 LNILGDGKDQVLHLVEPDVL--WTENYQHSYPYDWRTKKPVILKASQQWF--IDTERIKP 651
+ I V L E + L ++E + HSYP+ WR+KKP+I +A+ QWF ID ++
Sbjct: 366 IKIWDANPKIVELLKEKNALVHYSE-FTHSYPHSWRSKKPLIFRATPQWFFSIDHAGLRE 424
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTII--VNEANI 709
E+L +++V ++P+ +R + RP WC+SRQR WGVPIP F +++ I
Sbjct: 425 ESLKAIDKVQWIPDWGITRIRSMVESRPDWCLSRQRNWGVPIPSFTCKSCGFTHLDDKTI 484
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL----NTSDVNSNVTKSN-DILDIWFDSGISWSHVLK 764
KHF ++ + G + W+ + LL N + S+ K + DILD+WFDSG+S V
Sbjct: 485 KHFIQIVKKEGIEVWYERDAKDLLPEGTNCTKCGSDDLKQDKDILDVWFDSGVSSFAVFG 544
Query: 765 D----KPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
D +PA +Y+EG DQ GWF SSL S+A++ P+++V HG+V+DEKG MSKS+G
Sbjct: 545 DSLDHEPADLYLEGSDQHRGWFQSSLWPSMAIRKRPPYKSVLTHGYVLDEKGHAMSKSLG 604
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
NVI+ DI + YG D+LR WV+ +D V
Sbjct: 605 NVINP----------------------TTDI------INQYGADILRLWVSTQDFRD-DV 635
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG-----SISRYVDVYMLKRLCEFQN 935
IGK+ + + + +KIR++ RYLLG + +E G +D + L +L +
Sbjct: 636 KIGKDSIKTVAEAYRKIRNTFRYLLG--NTKAEVLGWKLKKEDIESIDKFYLHKLAKLNE 693
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ LY +Q+ +L F +LS YF +++DR+YCD N + R S + L I
Sbjct: 694 DVKKLYENYQFHLVYHRVLVFCTVDLSQEYFEIIRDRMYCDGKNSKTRKSSEYVLAVILE 753
Query: 996 VLLRTVAPIMPHLAEEVYSHLPSRQGTFSS 1025
L + +API+ EEV++ + F S
Sbjct: 754 TLTKILAPILSFTTEEVWTEFGLKDSVFYS 783
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 241/434 (55%), Gaps = 31/434 (7%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+++ +E KP F+LHDGPPYANG H+GH++NKILKDI ++S L G + +PGW
Sbjct: 42 KVFQKMKEIRKSKPSFVLHDGPPYANGNFHVGHSLNKILKDIIVKSKTLSGFQTDMIPGW 101
Query: 66 DCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEH-NC 121
DCHGLPIE LK + + + SP ++RKK + +A E + Q + + L WE N
Sbjct: 102 DCHGLPIEVQVLKNLGKEARNTSPSELRKKCREYAAEFVGKQGEDLSRF--LCFWEEGNK 159
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T E+ + F +L+++ YIY+ KPVYW TA AE+E+EY+ +HVS SIY+
Sbjct: 160 YLTMAPEFEARIVEVFGSLFEKGYIYKGKKPVYWCIDLATAHAEAEIEYQ-NHVSPSIYV 218
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSV-ASVKGANVIVAKC 240
K ++G D + LIWTTTPW+LPAN I FN L+YS+ S +I+A
Sbjct: 219 KFA--------VKGENDTYCLIWTTTPWTLPANLAICFNEELDYSLFQSDTHGRLILADG 270
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L ES++ + + L+ +T++HP +R+ L V+ GTG VH A
Sbjct: 271 LKESVEQKTGITLTKIKSLSSADLKQMTFLHPFI--ERESIPLFGNHVTLDAGTGCVHTA 328
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL-- 358
P HG DD+ + A +P L+ + + G+Y+ D ++G+ I V L E + L
Sbjct: 329 PGHGTDDYRVGTAAGLPPLSPVDDYGRYT-DEFEMMKGIKIWDANPKIVELLKEKNALVH 387
Query: 359 WTENYQHSYPYDWRTKKPVILKASQQWF--IDTERIKPEALVCKTVGNILGRVGITHDRP 416
++E + HSYP+ WR+KKP+I +A+ QWF ID ++ E+L + GIT R
Sbjct: 388 YSE-FTHSYPHSWRSKKPLIFRATPQWFFSIDHAGLREESLKAIDKVQWIPDWGITRIR- 445
Query: 417 GTALAESELEYKPD 430
S +E +PD
Sbjct: 446 ------SMVESRPD 453
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 12/185 (6%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVL--WTENYQHSYPYDWRTKKP 1163
L+ + + G+Y+ D ++G+ I V L E + L ++E + HSYP+ WR+KKP
Sbjct: 347 LSPVDDYGRYT-DEFEMMKGIKIWDANPKIVELLKEKNALVHYSE-FTHSYPHSWRSKKP 404
Query: 1164 VILKASQQWF--IDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGV 1221
+I +A+ QWF ID ++ E+L ++ V ++P+ +R + RP WC+SRQR WGV
Sbjct: 405 LIFRATPQWFFSIDHAGLREESLKAIDKVQWIPDWGITRIRSMVESRPDWCLSRQRNWGV 464
Query: 1222 PIPVFYDGDTII--VNEANIKHFCTLIDEHGPDFWWSLPVEQLL----NTSDVNSNVTKS 1275
PIP F +++ IKHF ++ + G + W+ + LL N + S+ K
Sbjct: 465 PIPSFTCKSCGFTHLDDKTIKHFIQIVKKEGIEVWYERDAKDLLPEGTNCTKCGSDDLKQ 524
Query: 1276 NQGLL 1280
++ +L
Sbjct: 525 DKDIL 529
>gi|304372933|ref|YP_003856142.1| Isoleucyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
gi|304309124|gb|ADM21604.1| Isoleucyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
Length = 892
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 216/612 (35%), Positives = 329/612 (53%), Gaps = 52/612 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY DH S SIY+ +++Q + + +G + +IWTTTPW+L AN +A
Sbjct: 195 SALAEAEIEY-LDHRSPSIYVAFEISQGNSKVTKGD---YLVIWTTTPWTLIANSGVAVG 250
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
EYS + +VA LVE L F D ++V F G+ L D+ YI PI KE ++
Sbjct: 251 EKFEYSKVKHQDKFFVVATELVEKLAQEFNWDHFEIVDTFLGEKLVDVKYIRPIMKE-KE 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
K++ V+ + G+GLVH AP G+DDF ++ + + + + G + + EGL
Sbjct: 310 GKVVQGHHVTVTSGSGLVHIAPLFGEDDFWISKKTGLEHVMHVNDDGTLN-ELARKYEGL 368
Query: 597 NILGDGKDQVLHL-VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
L K+ L E +L +HSYP+DWRT KPVI + + QWF+ E+IK E L
Sbjct: 369 FYLDANKEIGQDLEKEGKLLKFSILKHSYPHDWRTNKPVIYRGTPQWFVAIEKIKSEILK 428
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFC 713
EEV F E K+ L+ I R W ISRQR WGVPI VFYD + ++ +
Sbjct: 429 ASEEVIFPQEWIKRRLQTMIENRQDWTISRQRSWGVPIIVFYDENKNPVLDKPELFDYVI 488
Query: 714 TLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK---PAHV 770
L+ ++G D W+ V++LL N TK NDI+D+WFDSG + V DK P +
Sbjct: 489 NLVKQYGTDVWYEKEVDELLPEEYRNLGWTKENDIMDVWFDSGSTSISVKVDKTELPFDL 548
Query: 771 YMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQ 830
Y+EG DQ GWF SSL+ S + AP+R + HGF+VD+ G KMSKS GN +S D+
Sbjct: 549 YLEGSDQYRGWFNSSLINSYIYYNKAPYRRLLSHGFIVDQNGNKMSKSKGNGVSPLDL-- 606
Query: 831 GAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSS 890
+ YG D+LR WV+ + V K+I +
Sbjct: 607 ---------------------------IKTYGADILRLWVSNSEYFNDVV-YSKDIFEQN 638
Query: 891 QDDVQKIRSSLRYLLGVL----HNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQY 946
+ +KIR+++++L+ L HN + S+ +Y+D ++ +F+NT+ Y F++
Sbjct: 639 VEIYRKIRNTIKFLITNLEDYKHNPNLQLESVHQYID----NKIKKFKNTIIDNYDNFRF 694
Query: 947 ARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMP 1006
+ + NF++ + S FY ++ KD LY D ++ R + L+N+ +VL ++API+P
Sbjct: 695 VKIIKEANNFII-DFSNFYLSIAKDSLYTDKLDNPNRRQFQYNLYNLLNVLTISLAPILP 753
Query: 1007 HLAEEVYSHLPS 1018
EE+YS++ S
Sbjct: 754 TTTEEIYSYIKS 765
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/384 (42%), Positives = 230/384 (59%), Gaps = 12/384 (3%)
Query: 19 PEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT 78
P+F+LHDGPPYANG HIGHA+NK+LKDI +R +QG YVPGWD HGLPIE K ++
Sbjct: 51 PQFVLHDGPPYANGDIHIGHALNKVLKDIVVRYKTMQGFYSPYVPGWDTHGLPIENKILS 110
Query: 79 SKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
+ K LS L++RK+A N+A E I +QK +FE +L D+ Y T + QL
Sbjct: 111 LNNISHKSLSVLELRKQANNYANEQIESQKKQFEQLNLLTDFS-TIYQTNAPTFEAKQLE 169
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG 195
F + ++ +YR LKPVYWSP+S++ALAE+E+EY DH S SIY+ +++Q + + +G
Sbjct: 170 LFKVMVQKGLVYRGLKPVYWSPTSQSALAEAEIEY-LDHRSPSIYVAFEISQGNSKVTKG 228
Query: 196 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD-IE 254
+ +IWTTTPW+L AN +A EYS + +VA LVE L F D E
Sbjct: 229 D---YLVIWTTTPWTLIANSGVAVGEKFEYSKVKHQDKFFVVATELVEKLAQEFNWDHFE 285
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
+V F G+ L D+ YI PI KE ++ K++ V+ + G+GLVH AP G+DDF ++
Sbjct: 286 IVDTFLGEKLVDVKYIRPIMKE-KEGKVVQGHHVTVTSGSGLVHIAPLFGEDDFWISKKT 344
Query: 315 KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL-VEPDVLWTENYQHSYPYDWRT 373
+ + + + G + + EGL L K+ L E +L +HSYP+DWRT
Sbjct: 345 GLEHVMHVNDDGTLN-ELARKYEGLFYLDANKEIGQDLEKEGKLLKFSILKHSYPHDWRT 403
Query: 374 KKPVILKASQQWFIDTERIKPEAL 397
KPVI + + QWF+ E+IK E L
Sbjct: 404 NKPVIYRGTPQWFVAIEKIKSEIL 427
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 1151 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPY 1210
+HSYP+DWRT KPVI + + QWF+ E+IK E L E V F E K+ L+ I R
Sbjct: 394 KHSYPHDWRTNKPVIYRGTPQWFVAIEKIKSEILKASEEVIFPQEWIKRRLQTMIENRQD 453
Query: 1211 WCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
W ISRQR WGVPI VFYD + ++ + L+ ++G D W+ V++LL
Sbjct: 454 WTISRQRSWGVPIIVFYDENKNPVLDKPELFDYVINLVKQYGTDVWYEKEVDELLPEEYR 513
Query: 1269 NSNVTKSN 1276
N TK N
Sbjct: 514 NLGWTKEN 521
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1089
SIAK LY D ++ R + L+N+ +VL ++API+P EE+YS++ S
Sbjct: 714 SIAKDSLYTDKLDNPNRRQFQYNLYNLLNVLTISLAPILPTTTEEIYSYIKS 765
>gi|417895605|ref|ZP_12539587.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
gi|341841502|gb|EGS82959.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
Length = 917
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 321/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGDKYIIAEALSDAVAEALDWD-KASIKLENEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAIDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 228/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + ++ IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMAEKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGDKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLENEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L EHG + W+ LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEHGSNIWFEREAIDLL 504
>gi|293553195|ref|ZP_06673832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
gi|291602605|gb|EFF32820.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
Length = 932
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPEI-IEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPEI-IEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|33151511|ref|NP_872864.1| isoleucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|81423872|sp|Q7VP34.1|SYI_HAEDU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|33147731|gb|AAP95253.1| isoleucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 935
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 213/628 (33%), Positives = 335/628 (53%), Gaps = 61/628 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIK-LNQVPAHLL---EGATDLHALIWTTTPWSLPANQ 472
G++LAE+E+EY+ D +S SIY++ K ++ L +G + A+IWTTTPW++P+N+
Sbjct: 192 GSSLAEAEVEYE-DKVSPSIYVRFKACDETAIETLFNAKGNGPISAIIWTTTPWTMPSNR 250
Query: 473 FIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPIN 531
IA +P LEY++ + VI+A LVE++ + + D++ G+ LQ + + HP
Sbjct: 251 AIAIHPELEYALVQLADERVILATELVESVAKAIEAESFDILATVKGETLQLLRFHHPFY 310
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
D+ + V++ GTGLVH AP HG DDF++A I + LI N GK+ D
Sbjct: 311 A--FDVPFIFGDHVTTEGGTGLVHTAPDHGTDDFIIARKNNIEMAGLIGNDGKFKSDV-E 367
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER-- 648
GL + + + L E L +HSYP+ WR K P+I +A+ QWFI E+
Sbjct: 368 FFAGLAVFESNEKVIEKLKETGALLKLARIKHSYPHCWRHKTPIIFRATPQWFIGMEKQG 427
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTIIVNEAN 708
++ +ALA ++ V ++P + + +A RP WCISRQR WGVP+ +F +T ++
Sbjct: 428 LRAQALAEIKTVRWIPNWGEARIDTMVANRPDWCISRQRTWGVPMAMFVHNETEELHPRT 487
Query: 709 I---KHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKD 765
+ + +++ G WW L ++L + K D LD+WFDSG +++ V++
Sbjct: 488 LDILELVAQRVEQQGIQAWWDLDPTEVLGED--AQHYHKVPDTLDVWFDSGSTYASVVEQ 545
Query: 766 KP------AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWFMSSL+ + A AP++ V HGFVVDEKG KMSKS+
Sbjct: 546 RPEFNGQTADMYLEGSDQHRGWFMSSLMLASATNGKAPYQQVLTHGFVVDEKGRKMSKSI 605
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI ++ + K+ G D+LR WVA S D T
Sbjct: 606 GNVIVPSEV---------WNKN--------------------GADILRLWVA---STDYT 633
Query: 880 --VPIGKNILNSSQDDVQKIRSSLRYLL----GVLHNHSESTGSISRYVDVYMLKRLCEF 933
+ + ILNS+ D ++IR++ R+LL G + E + +D + + E
Sbjct: 634 AEMKVSHGILNSAGDAYRRIRNTARFLLSNLNGFIPARDEVKPNEMIALDRWAVSCALEA 693
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
QN + Y +Q+ + L+ F E+ +FY ++KDR Y + AR S L +I
Sbjct: 694 QNDIIEAYEHYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHI 753
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQG 1021
L+R +API+ A+E++SHLP+ +G
Sbjct: 754 AEALVRWIAPILSFTADEIWSHLPTVEG 781
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/408 (38%), Positives = 232/408 (56%), Gaps = 17/408 (4%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY R+ GK FILHDGPPYANG H+GHAVNKILKDI ++S G YVPGWD
Sbjct: 37 LYQQIRQTSKGKKTFILHDGPPYANGNLHLGHAVNKILKDIIMKSKTASGFDTPYVPGWD 96
Query: 67 CHGLPIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK + ++ +S + R+ + +A E ++ QKA+F GVL DW+ N Y
Sbjct: 97 CHGLPIELKVESIVGKPNEKISAAEFRQACREYANEQVDRQKADFIRMGVLGDWD-NPYL 155
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T + + + + ++Y+ KPV+W ++LAE+E+EY+ D VS SIY++
Sbjct: 156 TMNFNTEASIIRTLAKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYE-DKVSPSIYVRF 214
Query: 184 K-LNQVPAHLL---EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK 239
K ++ L +G + A+IWTTTPW++P+N+ IA +P LEY++ + VI+A
Sbjct: 215 KACDETAIETLFNAKGNGPISAIIWTTTPWTMPSNRAIAIHPELEYALVQLADERVILAT 274
Query: 240 CLVESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
LVES+ + + +++ G+ LQ + + HP D+ + V++ GTGLVH
Sbjct: 275 ELVESVAKAIEAESFDILATVKGETLQLLRFHHPFYA--FDVPFIFGDHVTTEGGTGLVH 332
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG DDF++A I + LI N GK+ D GL + + + L E L
Sbjct: 333 TAPDHGTDDFIIARKNNIEMAGLIGNDGKFKSDV-EFFAGLAVFESNEKVIEKLKETGAL 391
Query: 359 WT-ENYQHSYPYDWRTKKPVILKASQQWFIDTER--IKPEALV-CKTV 402
+HSYP+ WR K P+I +A+ QWFI E+ ++ +AL KTV
Sbjct: 392 LKLARIKHSYPHCWRHKTPIIFRATPQWFIGMEKQGLRAQALAEIKTV 439
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 1108 LITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVIL 1166
LI N GK+ D GL + + + L E L +HSYP+ WR K P+I
Sbjct: 355 LIGNDGKFKSDV-EFFAGLAVFESNEKVIEKLKETGALLKLARIKHSYPHCWRHKTPIIF 413
Query: 1167 KASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
+A+ QWFI E+ ++ +ALA ++ V ++P + + +A RP WCISRQR WGVP+
Sbjct: 414 RATPQWFIGMEKQGLRAQALAEIKTVRWIPNWGEARIDTMVANRPDWCISRQRTWGVPMA 473
Query: 1225 VFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSL-PVEQL 1262
+F +T ++ ++ +++ G WW L P E L
Sbjct: 474 MFVHNETEELHPRTLDILELVAQRVEQQGIQAWWDLDPTEVL 515
>gi|406580476|ref|ZP_11055669.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD4E]
gi|406582689|ref|ZP_11057787.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD3E]
gi|406584968|ref|ZP_11059964.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD2E]
gi|406590351|ref|ZP_11064720.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD1E]
gi|410937028|ref|ZP_11368890.1| isoleucyl-tRNA ligase [Enterococcus sp. GMD5E]
gi|404453853|gb|EKA00885.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD4E]
gi|404457679|gb|EKA04209.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD3E]
gi|404463187|gb|EKA08883.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD2E]
gi|404469420|gb|EKA14226.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD1E]
gi|410734621|gb|EKQ76540.1| isoleucyl-tRNA ligase [Enterococcus sp. GMD5E]
Length = 932
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 336/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + L E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQQP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 239/398 (60%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ L E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDILDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|329117589|ref|ZP_08246306.1| isoleucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
gi|326907994|gb|EGE54908.1| isoleucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
Length = 931
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 325/643 (50%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGKL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGANV--IVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P ++Y G++ +VA+ L+E+L F + +V+ F G L+ I HP + E
Sbjct: 247 PDMDYVQVKPAGSDCKYVVAEGLLESLSNKFGWPEFEVLNSFKGSELEYIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V+ GTG+VH AP G+DD+ + K+ V + +G +AGP +
Sbjct: 307 DELVIL-GDHVTLETGTGIVHTAPGFGEDDYNVGSKYKLEVAVTVDERGIMMENAGPDFQ 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V +V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 366 G-----QFYDKVTPIVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSDFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+VNF P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKVNFHPSWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L ++ G WW ++LL + N TK DI+D+WFDSG SW+ V+
Sbjct: 481 -DHIANLFEQEGSIIWWKKEAKELLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVM 539
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
D PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARGHLDYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKEVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
GN I D+T+ YG ++LR WV + D
Sbjct: 600 KGNTILPSDVTK-----------------------------QYGAEILRLWVTS-VDTDN 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + +IL + +KIR++LR+L+ + + +T +++ VD YM + +
Sbjct: 630 DVRVSMDILGQVSETYRKIRNTLRFLIANTSDFNPNTDAVAYENLSAVDKYMTIKFNKLV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
++T Y + + + ++NFV +LSAFY KD +Y + N R ++I
Sbjct: 690 ELINTSYASYDFMAIYKAVVNFVTIDLSAFYLDFAKDVVYIEGANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
+ + + PI+PH AEE++S+L F + Y G
Sbjct: 750 VKITKLLTPILPHTAEEIWSYLEFESEEFVQLSELPLAESYEG 792
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 225/402 (55%), Gaps = 20/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ LY ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G + +VPG
Sbjct: 34 ANLYKKRQELNEGKPSFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPFVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + + + + +AL ++ Q+ +F+ GV ADWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEMDLAEYLEMCRTYALSQVDKQREDFKRLGVSADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 VTLMPQYEADQIRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV--IVAKC 240
K+ L TD + ++WTTTP+++ A++ + P ++Y G++ +VA+
Sbjct: 212 NKVKDGKGKL---DTDTYIVVWTTTPFTVTASRGLTVGPDMDYVQVKPAGSDCKYVVAEG 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ESL F + EV+ F G L+ I HP + E +L +L V+ GTG+VH
Sbjct: 269 LLESLSNKFGWPEFEVLNSFKGSELEYIVTEHPWDTEVDELVIL-GDHVTLETGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--- 356
AP G+DD+ + K+ V + +G +AGP + G D+V +V+
Sbjct: 328 APGFGEDDYNVGSKYKLEVAVTVDERGIMMENAGPDFQ-----GQFYDKVTPIVKEKLGD 382
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + E L
Sbjct: 383 LLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSDFRQEIL 424
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP +G + D+V +V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDERGIMMENAGPDFQG-----QFYDKVTPIVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + E L +E VNF P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSDFRQEILDEIEKVNFHPSWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L ++ G WW ++LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHIANLFEQEGSIIWWKKEAKELL 504
>gi|424679103|ref|ZP_18115934.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV103]
gi|424682305|ref|ZP_18119080.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV116]
gi|424684052|ref|ZP_18120780.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV129]
gi|424686881|ref|ZP_18123543.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV25]
gi|424690049|ref|ZP_18126585.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV31]
gi|424692291|ref|ZP_18128794.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV37]
gi|424698029|ref|ZP_18134337.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV41]
gi|424700556|ref|ZP_18136740.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV62]
gi|424716270|ref|ZP_18145583.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV68]
gi|424729460|ref|ZP_18158061.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV81]
gi|424735077|ref|ZP_18163550.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV85]
gi|424757104|ref|ZP_18184868.1| isoleucine--tRNA ligase [Enterococcus faecalis R508]
gi|402349355|gb|EJU84306.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV116]
gi|402349384|gb|EJU84334.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV103]
gi|402362988|gb|EJU97498.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV129]
gi|402365183|gb|EJU99609.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV31]
gi|402366588|gb|EJV00958.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV25]
gi|402373647|gb|EJV07718.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV62]
gi|402373938|gb|EJV07986.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV41]
gi|402378682|gb|EJV12520.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV37]
gi|402388463|gb|EJV21902.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV68]
gi|402393914|gb|EJV27120.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV81]
gi|402404694|gb|EJV37310.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV85]
gi|402407632|gb|EJV40149.1| isoleucine--tRNA ligase [Enterococcus faecalis R508]
Length = 933
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 334/624 (53%), Gaps = 61/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH-LLEGATDLHALIWTTTPWSLPANQFIAF 476
++LAE+E+EYK D S SIY + N V LL+ T +IWTTTPW+LPAN I+
Sbjct: 198 SSLAEAEIEYK-DVKSPSIY--VAFNVVDGKGLLDNETAF--VIWTTTPWTLPANLGISV 252
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 253 NPDFTYVEVKADGRKFVIAKDLLSTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DR 310
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG
Sbjct: 311 TSLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEG 369
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ + L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + +
Sbjct: 370 I-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDI 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 429 LDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPET-IEH 487
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 488 VANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRER 547
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 548 EELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGN 607
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I LP EK + + G D+LR WV++ + V
Sbjct: 608 TI-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVR 637
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNT 936
+ +ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 638 VSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEI 697
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R +
Sbjct: 698 RENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVS 757
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQ 1020
L + + PI+PH AEE++S L +
Sbjct: 758 LTKLLTPIIPHTAEEIWSFLQEEE 781
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 237/394 (60%), Gaps = 17/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY + N
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIY--VAFNV 221
Query: 188 VPAH-LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
V LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 222 VDGKGLLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLSTVK 279
Query: 247 WTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+
Sbjct: 280 EAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGE 337
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 338 DDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFF 395
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 396 THSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|365873669|ref|ZP_09413202.1| isoleucyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983756|gb|EHM09963.1| isoleucyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
Length = 928
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/620 (34%), Positives = 327/620 (52%), Gaps = 61/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATD-LHALIWTTTPWSLPANQFIAF 476
TALA +E+EY+ D S SIY+ + ++ + + D L +IWTTTPW+LPA+ +A
Sbjct: 195 TALAAAEIEYE-DEASPSIYVAYPMRKLSESMGQMPMDDLFVVIWTTTPWTLPASMAVAV 253
Query: 477 NPALEYSV-ASVKGANVIVAKCLVENLKWTFQTDIDV-----VCDFPGQYLQDITYIHPI 530
+P +Y V + G+ +I+A VE K F+ + + + FPG L+ HP
Sbjct: 254 HPQYQYGVFCASNGSRLIMA---VER-KEAFEAESGISLGEAIRVFPGAGLEGAIAGHPF 309
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+ RD+ L+ A +V GTG VH AP HG +DF + + +LN + N+G + D
Sbjct: 310 YAD-RDIPLVLADYVVLDSGTGCVHTAPGHGVEDFETGVRYGLEILNPVDNKGFFVKDT- 367
Query: 591 PGLEGLNILGDGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 649
P + G++I K + L E +L++ +HSYP+ WR K+PVI +++ QWF+ +
Sbjct: 368 PLVGGMSISDGAKLVMSTLAESGRLLFSGKIKHSYPHCWRCKRPVIFRSTDQWFVSVQAF 427
Query: 650 KPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEA 707
+ +A+ +E V +VP + + + + R WCISRQRVWGVPIP FY D ++V
Sbjct: 428 REDAMGAIESVKWVPAWGRDRIGNMVRDRSDWCISRQRVWGVPIPAFYCEDCKKVVVEPP 487
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLLN----TSDVNSN-VTKSNDILDIWFDSGISWSHV 762
++ +I G D WW+ S E++L SN + K +DI+D+WFDSG+S V
Sbjct: 488 MVRRVAQVIRREGSDAWWTKSPEEMLGELCRCPHCGSNRLRKESDIMDVWFDSGVSHLAV 547
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
L+ + PA +Y+EG DQ GWF +SLLT VA + APFR V HGF+VD G KMSK
Sbjct: 548 LETRQELRWPADMYLEGSDQHRGWFQTSLLTGVATRGKAPFRQVLTHGFIVDGHGRKMSK 607
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GNV S ++ + YG D+LR WVA+ +
Sbjct: 608 SLGNVTSPQEV-----------------------------IDKYGADILRLWVASTDYRG 638
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEF 933
V I IL + + ++IR++ R++LG L + S +SR+ D + L RL +
Sbjct: 639 -DVRISDRILKNLVESYRRIRNTARFILGNLSDFDPSKHMVSRHDLMPFDKWALSRLQDL 697
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y E+++ + F N++S+ Y + KDRLY D +G +R S + I
Sbjct: 698 VEKVTKGYEEYEFHVPYFAVHQFCDNDMSSLYLDVCKDRLYADHCDGLSRRSAQSAMWEI 757
Query: 994 FHVLLRTVAPIMPHLAEEVY 1013
L + +API+ EE++
Sbjct: 758 LISLTKILAPILSFTCEEIW 777
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 232/400 (58%), Gaps = 13/400 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y ++ +G P F+LHDGPPYANG HIG A NKILKD + ++G R YVPGW
Sbjct: 38 DIYGKMQDKPDGAPTFVLHDGPPYANGHIHIGTAFNKILKDFIPKYKSMRGYRAPYVPGW 97
Query: 66 DCHGLPIELKAI----TSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
D HGLPIELK + KD+ LSP+D+R K +AL ++ Q+ EF+ GVL DW+ N
Sbjct: 98 DTHGLPIELKVLKEEGVDKDQ-LSPVDLRAKCAKYALGFVDVQREEFKRLGVLGDWD-NP 155
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T EY Q+ F ++ ++ +Y+ KPV+W +TALA +E+EY+ D S SIY+
Sbjct: 156 YLTLRPEYEAAQIEAFADMVEKGLVYKGQKPVFWCTDCQTALAAAEIEYE-DEASPSIYV 214
Query: 182 KIKLNQVPAHLLEGAT-DLHALIWTTTPWSLPANQFIAFNPALEYSV-ASVKGANVIVAK 239
+ ++ + + DL +IWTTTPW+LPA+ +A +P +Y V + G+ +I+A
Sbjct: 215 AYPMRKLSESMGQMPMDDLFVVIWTTTPWTLPASMAVAVHPQYQYGVFCASNGSRLIMAV 274
Query: 240 CLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
E+ + + E + FPG L+ HP + RD+ L+ A +V GTG VH
Sbjct: 275 ERKEAFEAESGISLGEAIRVFPGAGLEGAIAGHPFYAD-RDIPLVLADYVVLDSGTGCVH 333
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD-V 357
AP HG +DF + + +LN + N+G + D P + G++I K + L E +
Sbjct: 334 TAPGHGVEDFETGVRYGLEILNPVDNKGFFVKDT-PLVGGMSISDGAKLVMSTLAESGRL 392
Query: 358 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L++ +HSYP+ WR K+PVI +++ QWF+ + + +A+
Sbjct: 393 LFSGKIKHSYPHCWRCKRPVIFRSTDQWFVSVQAFREDAM 432
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPV 1164
LN + N+G + D P + G++I K + L E +L++ +HSYP+ WR K+PV
Sbjct: 354 LNPVDNKGFFVKDT-PLVGGMSISDGAKLVMSTLAESGRLLFSGKIKHSYPHCWRCKRPV 412
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +++ QWF+ + + +A+ +E V +VP + + + + R WCISRQRVWGVPIP
Sbjct: 413 IFRSTDQWFVSVQAFREDAMGAIESVKWVPAWGRDRIGNMVRDRSDWCISRQRVWGVPIP 472
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
FY D ++V ++ +I G D WW+ E++L
Sbjct: 473 AFYCEDCKKVVVEPPMVRRVAQVIRREGSDAWWTKSPEEMLG 514
>gi|422721039|ref|ZP_16777644.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0017]
gi|315031711|gb|EFT43643.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0017]
Length = 933
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 334/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ + GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLNAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPET-IEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 237/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLTTVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ + GTGLVH AP HG+D
Sbjct: 281 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLNAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|307290035|ref|ZP_07569959.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
gi|306498877|gb|EFM68371.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
Length = 933
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 333/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATTQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE 781
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 281 AVGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATTQWFASISKFRQDIL 429
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATTQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|425736767|ref|ZP_18855043.1| isoleucyl-tRNA ligase [Staphylococcus massiliensis S46]
gi|425483239|gb|EKU50391.1| isoleucyl-tRNA ligase [Staphylococcus massiliensis S46]
Length = 915
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 218/620 (35%), Positives = 325/620 (52%), Gaps = 60/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EY D S SIY+ + + E A +IWTTTPW++P+N I +
Sbjct: 191 SSLAEAEIEYH-DKRSPSIYVAFDVEDGKGVVDEEAK---FIIWTTTPWTIPSNVAITVS 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVC---DFPGQYLQDITYIHPINKEQ 534
P L Y +V G I+A+ LV+ + + D + + D+ G+ L+ + HP
Sbjct: 247 PELTYVQMNVNGEKYIIAEALVDEVAEALEWDKESIVREKDYNGKDLEYVEAKHPFI--D 304
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R ++ V++ GTG+VH AP HG+DD+ + + V++ I ++G ++ +AG E
Sbjct: 305 RISLVIHGDHVTTDAGTGVVHTAPGHGEDDYFVCQKYDLDVISPIDDKGVFTEEAGQ-FE 363
Query: 595 GLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ K+ L E L E HSYP+DWRTKKPVI +A+ QWF +++ +
Sbjct: 364 GMFYDKANKEVTDLLTEKGALLKLEFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDI 423
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +++ F E K L + I R W ISRQRVWGVP+PVFY +GD I+ E + H
Sbjct: 424 LDAIDDTKFKVEWGKTRLYNMIRDRGEWVISRQRVWGVPLPVFYAENGDIIMTKET-VNH 482
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L +EHG + W+ + LL + N TK DI+D+WFDSG S VL+ +
Sbjct: 483 VADLFEEHGSNVWFEREAKDLLPEGFTHEGSPNGEFTKEEDIMDVWFDSGSSHRAVLEGR 542
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D G KMSKS+GN
Sbjct: 543 DELSYPADLYIEGSDQYRGWFNSSITTSVATRGVSPYKMLLSHGFVMDGDGKKMSKSLGN 602
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI I + G D+ R W A+ V
Sbjct: 603 VIVPDKIVKQK-----------------------------GADIARLW-ASSVDYLADVR 632
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQ-NT 936
I IL + D +KIR++LR++LG L++ + +T +IS VD Y+L RL EF +T
Sbjct: 633 ISDEILKQTADVYRKIRNTLRFMLGNLNDFNPNTDAISESELLEVDKYLLNRLREFTAHT 692
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+D Y + Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 693 IDN-YDNYDYLDIYQEIQNFINVELSNFYLDYGKDILYIEKQDALKRRSMQTVLYQILLN 751
Query: 997 LLRTVAPIMPHLAEEVYSHL 1016
+ + +API+PH +EV+SH+
Sbjct: 752 MTKLLAPIIPHTTDEVWSHM 771
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 227/399 (56%), Gaps = 16/399 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
++Y+ E FILHDGPPYANG H+GHA+NK+LKD +R +QG YVPGW
Sbjct: 35 DIYNKLLEKNKDNTHFILHDGPPYANGNLHMGHALNKMLKDFIVRYKSMQGYYAPYVPGW 94
Query: 66 DCHGLPIELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
D HGLPIE +A+T K K +S + R+K ++FA + I+ Q+ +F+ GV D++ N Y
Sbjct: 95 DTHGLPIE-QALTKKGVNRKQMSTAEFREKCEDFARKQIDGQREDFKRLGVNGDFD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+
Sbjct: 153 ITLTPQYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSPSIYVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ + E A +IWTTTPW++P+N I +P L Y +V G I+A+ LV
Sbjct: 212 FDVEDGKGVVDEEAK---FIIWTTTPWTIPSNVAITVSPELTYVQMNVNGEKYIIAEALV 268
Query: 243 ESLKWTFQTDIEVVC---DFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
+ + + D E + D+ G+ L+ + HP R ++ V++ GTG+VH
Sbjct: 269 DEVAEALEWDKESIVREKDYNGKDLEYVEAKHPFI--DRISLVIHGDHVTTDAGTGVVHT 326
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP HG+DD+ + + V++ I ++G ++ +AG EG+ K+ L E L
Sbjct: 327 APGHGEDDYFVCQKYDLDVISPIDDKGVFTEEAGQ-FEGMFYDKANKEVTDLLTEKGALL 385
Query: 360 T-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 386 KLEFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDIL 424
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILK 1167
I ++G ++ +AG EG+ K+ L E L E HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEAGQ-FEGMFYDKANKEVTDLLTEKGALLKLEFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L ++ F E K L + I R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASINKVRQDILDAIDDTKFKVEWGKTRLYNMIRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+GD I+ E + H L +EHG + W+ + LL
Sbjct: 468 AENGDIIMTKET-VNHVADLFEEHGSNVWFEREAKDLL 504
>gi|333905368|ref|YP_004479239.1| isoleucyl-tRNA synthetase [Streptococcus parauberis KCTC 11537]
gi|333120633|gb|AEF25567.1| isoleucyl-tRNA synthetase [Streptococcus parauberis KCTC 11537]
Length = 931
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 325/643 (50%), Gaps = 64/643 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGKL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGANV--IVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P ++Y G++ +VA+ L+E+L F + +V+ F G L+ I HP + E
Sbjct: 247 PDMDYVQVKPAGSDCKYLVAEGLLESLSNKFGWPEFEVLNSFKGSELEYIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V+ GTG+VH AP G+DD+ + K+ V + +G +AGP +
Sbjct: 307 DELVIL-GDHVTLESGTGIVHTAPGFGEDDYNVGSKYKLEVAVTVDERGIMMENAGPDFQ 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V +V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 366 G-----QFYDKVTPIVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSDFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+VNF P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKVNFHPSWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L ++ G WW ++LL + N TK DI+D+WFDSG SW+ V+
Sbjct: 481 -DHIANLFEQEGSIIWWKKEAKELLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVM 539
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
D PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D KG KMSKS
Sbjct: 540 NARGHLDYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKEVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
GN I D+T+ YG ++LR WV + D
Sbjct: 600 KGNTILPSDVTK-----------------------------QYGAEILRLWVTS-VDTDN 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + +IL + +KIR++LR+L+ + + +T +++ VD YM + +
Sbjct: 630 DVRVSMDILGQVSETYRKIRNTLRFLIANTSDFNPNTDAVAYENLSAVDKYMTIKFNKLV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
++T Y + + + ++NFV +LSAFY KD +Y + N R ++I
Sbjct: 690 ELINTSYASYDFMAIYKAVVNFVTIDLSAFYLDFAKDVVYIEGANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSG 1037
+ + + PI+PH AEE++S+L F + Y G
Sbjct: 750 VKITKLLTPILPHTAEEIWSYLEFESEEFVQLSELPLAESYEG 792
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 225/402 (55%), Gaps = 20/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ LY ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G + +VPG
Sbjct: 34 ANLYKKRQELNEGKPSFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPFVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + + + + +AL ++ Q+ +F+ GV ADWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEMDLAEYLEMCRTYALSQVDKQREDFKRLGVSADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 VTLMPQYEADQIRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV--IVAKC 240
K+ L TD + ++WTTTP+++ A++ + P ++Y G++ +VA+
Sbjct: 212 NKVKDGKGKL---DTDTYIVVWTTTPFTVTASRGLTVGPDMDYVQVKPAGSDCKYLVAEG 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ESL F + EV+ F G L+ I HP + E +L +L V+ GTG+VH
Sbjct: 269 LLESLSNKFGWPEFEVLNSFKGSELEYIVTEHPWDTEVDELVIL-GDHVTLESGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--- 356
AP G+DD+ + K+ V + +G +AGP + G D+V +V+
Sbjct: 328 APGFGEDDYNVGSKYKLEVAVTVDERGIMMENAGPDFQ-----GQFYDKVTPIVKEKLGD 382
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + E L
Sbjct: 383 LLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSDFRQEIL 424
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP +G + D+V +V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDERGIMMENAGPDFQG-----QFYDKVTPIVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + E L +E VNF P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSDFRQEILDEIEKVNFHPSWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L ++ G WW ++LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHIANLFEQEGSIIWWKKEAKELL 504
>gi|423262697|ref|YP_007012722.1| isoleucyl-tRNA synthetase [Mycoplasma hyorhinis SK76]
gi|422035234|gb|AFX74076.1| Isoleucyl-tRNA synthetase [Mycoplasma hyorhinis SK76]
Length = 892
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 215/612 (35%), Positives = 329/612 (53%), Gaps = 52/612 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY DH S SIY+ +++Q + + +G + +IWTTTPW+L AN +A
Sbjct: 195 SALAEAEIEY-LDHRSPSIYVAFEISQGNSKVTKGD---YLVIWTTTPWTLIANSGVAVG 250
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
EYS + +VA LVE L F D ++V F G+ L D+ YI PI KE ++
Sbjct: 251 EKFEYSKVKHQDKFFVVATELVEKLAQEFNWDHFEIVDTFLGEKLVDVKYIRPIMKE-KE 309
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
K++ V+ + G+GLVH AP G+DDF ++ + + + + G + + EGL
Sbjct: 310 GKVVQGHHVTVTSGSGLVHIAPLFGEDDFWISKKTGLEHVMHVNDDGTLN-ELARKYEGL 368
Query: 597 NILGDGKDQVLHL-VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALA 655
L K+ L E +L +HSYP+DWRT KPVI + + QWF+ E+IK E L
Sbjct: 369 FYLDANKEIGQDLEKEGKLLKFSILKHSYPHDWRTNKPVIYRGTPQWFVAIEKIKSEILK 428
Query: 656 CLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFC 713
EEV F E K+ L+ I R W ISRQR WGVP+ VFYD + ++ +
Sbjct: 429 ASEEVIFPQEWIKRRLQTMIENRQDWTISRQRSWGVPVIVFYDENKNPVLDKPELFDYVI 488
Query: 714 TLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK---PAHV 770
L+ ++G D W+ V++LL N TK NDI+D+WFDSG + V DK P +
Sbjct: 489 NLVKQYGTDVWYEKEVDELLPEEYRNLGWTKENDIMDVWFDSGSTSISVKVDKTELPFDL 548
Query: 771 YMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQ 830
Y+EG DQ GWF SSL+ S + AP+R + HGF+VD+ G KMSKS GN +S D+
Sbjct: 549 YLEGSDQYRGWFNSSLINSYIYYNKAPYRRLLSHGFIVDQNGNKMSKSKGNGVSPLDL-- 606
Query: 831 GAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSS 890
+ YG D+LR WV+ + V K+I +
Sbjct: 607 ---------------------------IKTYGADILRLWVSNSEYFNDVV-YSKDIFEQN 638
Query: 891 QDDVQKIRSSLRYLLGVL----HNHSESTGSISRYVDVYMLKRLCEFQNTMDTLYGEFQY 946
+ +KIR+++++L+ L HN + S+ +Y+D ++ +F+NT+ Y F++
Sbjct: 639 VEIYRKIRNTIKFLITNLEDYKHNPNLQLESVHQYID----NKIKKFKNTIIDNYDNFRF 694
Query: 947 ARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMP 1006
+ + NF++ + S FY ++ KD LY D ++ R + L+N+ +VL ++API+P
Sbjct: 695 VKIIKEANNFII-DFSNFYLSIAKDSLYTDKLDNPNRRQFQYNLYNLLNVLTISLAPILP 753
Query: 1007 HLAEEVYSHLPS 1018
EE+YS++ S
Sbjct: 754 TTTEEIYSYIKS 765
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 231/384 (60%), Gaps = 12/384 (3%)
Query: 19 PEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAIT 78
P+F+LHDGPPYANG HIGHA+NK+LKDI +R +QG YVPGWD HGLPIE K ++
Sbjct: 51 PQFVLHDGPPYANGDIHIGHALNKVLKDIVVRYKTMQGFYSPYVPGWDTHGLPIENKILS 110
Query: 79 SKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLC 135
+ K LS L++RK+A N+A E I +QK +FE +L D+ Y T + QL
Sbjct: 111 LNNISHKSLSVLELRKQANNYANEQIESQKKQFEQLNLLTDFS-TTYQTNAPTFEAKQLE 169
Query: 136 QFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLEG 195
F + ++D +YR LKPVYWSP+S++ALAE+E+EY DH S SIY+ +++Q + + +G
Sbjct: 170 LFKVMVQKDLVYRGLKPVYWSPTSQSALAEAEIEY-LDHRSPSIYVAFEISQGNSKVTKG 228
Query: 196 ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD-IE 254
+ +IWTTTPW+L AN +A EYS + +VA LVE L F D E
Sbjct: 229 D---YLVIWTTTPWTLIANSGVAVGEKFEYSKVKHQDKFFVVATELVEKLAQEFNWDHFE 285
Query: 255 VVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE 314
+V F G+ L D+ YI PI KE ++ K++ V+ + G+GLVH AP G+DDF ++
Sbjct: 286 IVDTFLGEKLVDVKYIRPIMKE-KEGKVVQGHHVTVTSGSGLVHIAPLFGEDDFWISKKT 344
Query: 315 KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL-VEPDVLWTENYQHSYPYDWRT 373
+ + + + G + + EGL L K+ L E +L +HSYP+DWRT
Sbjct: 345 GLEHVMHVNDDGTLN-ELARKYEGLFYLDANKEIGQDLEKEGKLLKFSILKHSYPHDWRT 403
Query: 374 KKPVILKASQQWFIDTERIKPEAL 397
KPVI + + QWF+ E+IK E L
Sbjct: 404 NKPVIYRGTPQWFVAIEKIKSEIL 427
Score = 103 bits (256), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 1151 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPY 1210
+HSYP+DWRT KPVI + + QWF+ E+IK E L E V F E K+ L+ I R
Sbjct: 394 KHSYPHDWRTNKPVIYRGTPQWFVAIEKIKSEILKASEEVIFPQEWIKRRLQTMIENRQD 453
Query: 1211 WCISRQRVWGVPIPVFYDGDT--IIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTSDV 1268
W ISRQR WGVP+ VFYD + ++ + L+ ++G D W+ V++LL
Sbjct: 454 WTISRQRSWGVPVIVFYDENKNPVLDKPELFDYVINLVKQYGTDVWYEKEVDELLPEEYR 513
Query: 1269 NSNVTKSN 1276
N TK N
Sbjct: 514 NLGWTKEN 521
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 1038 SIAKRILYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1089
SIAK LY D ++ R + L+N+ +VL ++API+P EE+YS++ S
Sbjct: 714 SIAKDSLYTDKLDNPNRRQFQYNLYNLLNVLTISLAPILPTTTEEIYSYIKS 765
>gi|343524341|ref|ZP_08761299.1| isoleucine--tRNA ligase [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|343397990|gb|EGV10523.1| isoleucine--tRNA ligase [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
Length = 930
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 210/630 (33%), Positives = 320/630 (50%), Gaps = 54/630 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P ++Y + G IVA L+ +L F D+ V+ + GQ L I HP + E
Sbjct: 247 PDIDYVLVQPAGETRKFIVASELLNSLSEKFGWIDVQVLATYRGQELNHIVTEHPWDIEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L HG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 ELFAVHGSIVWWQREAKDLLPEGFTHPGSPNGIFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPKEDTVAYDDLRSVDKYMTVRFNQLIQTIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I + +
Sbjct: 695 AYADFEFLDIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDILVNITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
+ PI+PH AEE++S+L F
Sbjct: 755 LLTPIIPHTAEEIWSYLEHEPEEFVQLAEL 784
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 223/398 (56%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + + K +++AL ++ Q+ +F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKEMDLAEYLKLCRDYALSQVDKQREDFKRLGVSGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + P ++Y + G IVA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGPDIDYVLVQPAGETRKFIVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWIDVQVLATYRGQELNHIVTEHPWDIEVEELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFEG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L HG WW + LL
Sbjct: 469 EDGTPIMTEETIEHVAELFAVHGSIVWWQREAKDLL 504
>gi|50083317|ref|YP_044827.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|81394060|sp|Q6FG02.1|SYI_ACIAD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|49529293|emb|CAG67005.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 945
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 219/633 (34%), Positives = 333/633 (52%), Gaps = 70/633 (11%)
Query: 417 GTALAESELEYKPDHISKSI---YLKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPA 470
G+ALAE+E+EY+ D S +I + + LN + A L ++ TD+ +IWTTTPW+LPA
Sbjct: 201 GSALAEAEVEYE-DKKSDAIDVGFGVVDLNDLSARLNVEVQDPTDI--VIWTTTPWTLPA 257
Query: 471 NQFIAFNPALEYSVASVKG----ANVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDIT 525
NQ +A + ++Y + V+ N I+AK LVE+ ++ + VV DF G L+ +
Sbjct: 258 NQAVALHAEIDYQLVQVQSDRGTQNFILAKDLVESAIARYKLENPVVLADFKGAVLELLQ 317
Query: 526 YIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKY 585
HP+ + R + ++ V ++ GTG VH AP HG DD+ + L + V N + G Y
Sbjct: 318 LQHPLLAD-RQVPVILGEHVIATSGTGAVHTAPGHGTDDYKVGLIYNLKVDNPVGGNGVY 376
Query: 586 SPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI 644
P A P G +I + L LW HSYP+ WR K P+I +A+ QWFI
Sbjct: 377 LPTA-PIFSGEHIYKANPQIIEALGATGRLWAHQPIVHSYPHCWRHKTPIIFRATPQWFI 435
Query: 645 --DTERIKPEALACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT 701
D + ++ AL +E +++FVP+ K + I RP WCISRQR WGVPIP F DT
Sbjct: 436 SMDAKGLRECALNAIENDISFVPDWGKNRIESMIEGRPDWCISRQRTWGVPIPFFVHKDT 495
Query: 702 IIVNEAN------IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDS 755
NE + I+ LI+ G D W++ + + + N + D LD+WFDS
Sbjct: 496 ---NELHPRTPELIEEVAQLIEHEGIDAWFNREAKDFIGADAEHYNAVR--DTLDVWFDS 550
Query: 756 GISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDE 810
G + VL+ + PA +Y+EG DQ GWF SSLLTS+A+ AP++ + HGFVVDE
Sbjct: 551 GTTHYAVLRQREELTDPADLYLEGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDE 610
Query: 811 KGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWV 870
KG KMSKS+GN+I+ DI + G D LR+W+
Sbjct: 611 KGRKMSKSLGNIITPQDIIKD-----------------------------MGADGLRFWI 641
Query: 871 AAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYM 926
A+ + + GK I + + D ++IR++LR+LL L+ + ST ++ +D Y+
Sbjct: 642 ASSDYR-YEMTAGKEIFSRASDGYRRIRNTLRFLLANLNGFTPSTDALPVDQLIALDQYI 700
Query: 927 LKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSG 986
L+R E Q T+ Y + + L NF +N+L FY ++KDR Y + AR S
Sbjct: 701 LQRAAEVQKTVQQAYEDMNFHIVCSALTNFCINDLGGFYLDIIKDRQYTTKADSAARHSA 760
Query: 987 LHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
L+++ +R ++PI+ A+E + +P +
Sbjct: 761 QTALYHLVQAFVRWMSPILSFTAQEAWPLIPEQ 793
Score = 241 bits (614), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 234/441 (53%), Gaps = 29/441 (6%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R + GK +++LHDGPPYANG H+GHAVNK+LKDI ++S ++ G YVPGWD
Sbjct: 46 IYQKIRASRIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIVKSRVMDGFDAPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +AL ++ Q+ +F GV DW+ + Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYALSQVDLQRKDFIRMGVFGDWQ-DPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRSLGEIQKAGHIEPGLKPVNWCIDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL---LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG----A 233
+ LN + A L ++ TD+ +IWTTTPW+LPANQ +A + ++Y + V+
Sbjct: 224 GVVDLNDLSARLNVEVQDPTDI--VIWTTTPWTLPANQAVALHAEIDYQLVQVQSDRGTQ 281
Query: 234 NVIVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
N I+AK LVES ++ + VV DF G L+ + HP+ + R + ++ V ++
Sbjct: 282 NFILAKDLVESAIARYKLENPVVLADFKGAVLELLQLQHPLLAD-RQVPVILGEHVIATS 340
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HG DD+ + L + V N + G Y P A P G +I + L
Sbjct: 341 GTGAVHTAPGHGTDDYKVGLIYNLKVDNPVGGNGVYLPTA-PIFSGEHIYKANPQIIEAL 399
Query: 353 VEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGI 411
LW + HSYP+ WR K P+I +A+ QWFI + + N + V
Sbjct: 400 GATGRLWAHQPIVHSYPHCWRHKTPIIFRATPQWFISMDAKGLRECALNAIENDISFV-- 457
Query: 412 THDRP--GTALAESELEYKPD 430
P G ES +E +PD
Sbjct: 458 ----PDWGKNRIESMIEGRPD 474
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTA-PIFSGEHIYKANPQIIEALGATGRLWAHQPIVHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E ++FVP+ K + I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAKGLRECALNAIENDISFVPDWGKNRIESMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN------IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT NE + I+ LI+ G D W++ + + + N +
Sbjct: 487 IPFFVHKDT---NELHPRTPELIEEVAQLIEHEGIDAWFNREAKDFIGADAEHYNAVR 541
>gi|255971457|ref|ZP_05422043.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
gi|256957096|ref|ZP_05561267.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|257077892|ref|ZP_05572253.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|384518109|ref|YP_005705414.1| isoleucyl-tRNA synthetase [Enterococcus faecalis 62]
gi|397699396|ref|YP_006537184.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D32]
gi|430361446|ref|ZP_19426666.1| isoleucyl-tRNA synthetase [Enterococcus faecalis OG1X]
gi|430368038|ref|ZP_19428020.1| isoleucyl-tRNA synthetase [Enterococcus faecalis M7]
gi|255962475|gb|EET94951.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
gi|256947592|gb|EEU64224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|256985922|gb|EEU73224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|323480242|gb|ADX79681.1| isoleucyl-tRNA synthetase [Enterococcus faecalis 62]
gi|397336035|gb|AFO43707.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D32]
gi|429512467|gb|ELA02073.1| isoleucyl-tRNA synthetase [Enterococcus faecalis OG1X]
gi|429516543|gb|ELA06033.1| isoleucyl-tRNA synthetase [Enterococcus faecalis M7]
Length = 928
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 338/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 193 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 249 PDFTYVEVKADGRKFVIAKDLLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 307 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 365
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 366 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 425 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPET-IEHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 543
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 544 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 604 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 634 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 693
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 694 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 753
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y ++
Sbjct: 754 TKLLTPIIPHTAEEIWSFLQEEE-EYVQLAEFPGYETFT 791
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 41 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 100
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 101 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 159
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 160 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 218
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 219 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLTTVKE 275
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 276 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 333
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 334 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 392 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 349 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 406
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 407 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 466
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 467 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 504
>gi|241889685|ref|ZP_04776983.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
gi|241863307|gb|EER67691.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
Length = 910
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 227/624 (36%), Positives = 324/624 (51%), Gaps = 65/624 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY DH S SIY+ L + +G +IWTTTPW+LPAN IA +
Sbjct: 192 SALAEAEIEYH-DHTSPSIYVAFDLVSENGAVEKGT---KFVIWTTTPWTLPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P EY V G + +VAK L E W +V+ G+ L+ + HP
Sbjct: 248 PDFEYQVVKYNGESYLVAKERVAFLAEKFGWENYETGEVLV---GKDLEYLLCQHPF--L 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA-LAEKIPVLNLITNQGKYSPDAGPG 592
R L+ A +V+ GTGLVH AP HG DD+L+ L K+ VL+ + NQG + +AG
Sbjct: 303 DRTSTLILADYVTLDSGTGLVHTAPGHGVDDYLVGQLQYKLGVLSPVDNQGVLTEEAGQ- 361
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G + KD + HL E L E+ HSYP+DWR+KKP+I +A+ QWF + +
Sbjct: 362 FAGKFVFDANKDIIAHLAETGALLKQEDITHSYPHDWRSKKPIIFRATPQWFCSVDAFRS 421
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E L ++ F E K L + I R W ISRQRVWGVPIPVFY +G+ I+ E I
Sbjct: 422 ELLEAVDNTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIPVFYAENGEAILDIEL-I 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
+H + +E G + W+ ++LL + N TK DI+D+WFDSG S
Sbjct: 481 EHVAKIFEEEGSNVWFYKDTKELLPEGYTHPGSPNGEFTKEMDIMDVWFDSGTSHQGCCA 540
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + GFV+D G KMSKS+
Sbjct: 541 IREDLTYPADLYLEGSDQYRGWFNSSLITSVAVSGVAPYKELVSAGFVMDGNGNKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVIS +D+ K+L G +++R W +A
Sbjct: 601 GNVISPNDV---GKEL--------------------------GAEIIRLW-SASVDYTQD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS-ESTGSISRY-----VDVYMLKRLCEF 933
V I K+IL + +KIR++ R+LLG L+N S + + Y +D YM+ + +
Sbjct: 631 VRISKDILKQVSETYRKIRNTFRFLLGNLYNGSFNNKTDLVAYENLEELDKYMVLKFEKV 690
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y +Q+ + L+NF ELS+FY KD LY + + R S L L+ +
Sbjct: 691 VAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIEGEDSHKRQSMLTVLYTV 750
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLP 1017
+R +API+ AEEVY ++P
Sbjct: 751 LSKSVRLLAPILSFTAEEVYDNMP 774
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 232/400 (58%), Gaps = 19/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY+ E GKP ++LHDGPPYANG HIGHA+NKILKD ++ + G YVPGW
Sbjct: 36 DLYNKILEKNAGKPSYVLHDGPPYANGNIHIGHALNKILKDFIVKYKNMNGFVSPYVPGW 95
Query: 66 DCHGLPIELKAITSK-DKLLSPLD-IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE + + D+ P + R K K++AL+ ++ Q+A+F+ GVL DW+ N Y
Sbjct: 96 DTHGLPIEQVLVNNGVDRKSMPANKFRNKCKDYALKQVDKQRADFKKLGVLGDWD-NPYL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T D ++ Q+ F + + YIY+ LKP+YWSPSS +ALAE+E+EY DH S SIY+
Sbjct: 155 TLDPKFEAEQIRVFGKMVDKGYIYKGLKPIYWSPSSESALAEAEIEYH-DHTSPSIYVAF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK---- 239
L + +G +IWTTTPW+LPAN IA +P EY V G + +VAK
Sbjct: 214 DLVSENGAVEKGT---KFVIWTTTPWTLPANLGIAVHPDFEYQVVKYNGESYLVAKERVA 270
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L E W EV+ G+ L+ + HP R L+ A +V+ GTGLVH
Sbjct: 271 FLAEKFGWENYETGEVLV---GKDLEYLLCQHPF--LDRTSTLILADYVTLDSGTGLVHT 325
Query: 300 APAHGQDDFLLA-LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG DD+L+ L K+ VL+ + NQG + +AG G + KD + HL E L
Sbjct: 326 APGHGVDDYLVGQLQYKLGVLSPVDNQGVLTEEAGQ-FAGKFVFDANKDIIAHLAETGAL 384
Query: 359 WT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E+ HSYP+DWR+KKP+I +A+ QWF + + E L
Sbjct: 385 LKQEDITHSYPHDWRSKKPIIFRATPQWFCSVDAFRSELL 424
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPV 1164
L+ + NQG + +AG G + KD + HL E L E+ HSYP+DWR+KKP+
Sbjct: 346 LSPVDNQGVLTEEAGQ-FAGKFVFDANKDIIAHLAETGALLKQEDITHSYPHDWRSKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF + + E L ++ F E K L + I R W ISRQRVWGVPIP
Sbjct: 405 IFRATPQWFCSVDAFRSELLEAVDNTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY +G+ I+ E I+H + +E G + W+ ++LL
Sbjct: 465 VFYAENGEAILDIEL-IEHVAKIFEEEGSNVWFYKDTKELL 504
>gi|379020900|ref|YP_005297562.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M013]
gi|418951867|ref|ZP_13503934.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-160]
gi|359830209|gb|AEV78187.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M013]
gi|375371039|gb|EHS74830.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-160]
Length = 917
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 322/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G ++ + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF K + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L E+G + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEYGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV++
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVSS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 269 bits (687), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G ++ + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
I ++G ++ + G EG+ K L E L ++ HSYP+DWRTKKPVI +
Sbjct: 349 IDDKGVFTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A+ QWF +++ + L +E NF K + + + R W ISRQRVWGVP+PVFY
Sbjct: 408 ATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY 467
Query: 1228 -DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+ II+ + + H L E+G + W+ + LL
Sbjct: 468 AENGEIIMTKETVNHVADLFAEYGSNIWFEREAKDLL 504
>gi|257083914|ref|ZP_05578275.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|422694610|ref|ZP_16752601.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4244]
gi|422698171|ref|ZP_16756091.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1346]
gi|256991944|gb|EEU79246.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|315147954|gb|EFT91970.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4244]
gi|315173283|gb|EFU17300.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1346]
Length = 933
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 334/624 (53%), Gaps = 61/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH-LLEGATDLHALIWTTTPWSLPANQFIAF 476
++LAE+E+EYK D S SIY + N V LL+ T +IWTTTPW+LPAN I+
Sbjct: 198 SSLAEAEIEYK-DVKSPSIY--VAFNVVDGKGLLDNETAF--VIWTTTPWTLPANLGISV 252
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 253 NPDFTYVEVKADGRKFVIAKDLLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DR 310
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG
Sbjct: 311 TSLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEG 369
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ + L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + +
Sbjct: 370 I-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDI 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 429 LDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEH 487
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 488 VANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRER 547
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 548 EELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGN 607
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I LP EK + + G D+LR WV++ + V
Sbjct: 608 TI-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVR 637
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNT 936
+ +ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 638 VSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEI 697
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R +
Sbjct: 698 RENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVS 757
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQ 1020
L + + PI+PH AEE++S L +
Sbjct: 758 LTKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 237/394 (60%), Gaps = 17/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY + N
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIY--VAFNV 221
Query: 188 VPAH-LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
V LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 222 VDGKGLLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVK 279
Query: 247 WTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+
Sbjct: 280 EAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGE 337
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 338 DDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFF 395
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 396 THSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|307278946|ref|ZP_07560005.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
gi|306504333|gb|EFM73544.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
Length = 933
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 333/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 281 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|406040455|ref|ZP_11047810.1| isoleucyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 945
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 216/628 (34%), Positives = 328/628 (52%), Gaps = 60/628 (9%)
Query: 417 GTALAESELEYKPDHISKSI---YLKIKLNQVPAHL-LEGATDLHALIWTTTPWSLPANQ 472
G+ALAE+E+EY+ D S +I + + LN + L +E +IWTTTPW+LPANQ
Sbjct: 201 GSALAEAEVEYE-DKKSDAIDVGFGVVDLNDLGQRLNVEVTAPTDIVIWTTTPWTLPANQ 259
Query: 473 FIAFNPALEYSVASVKG----ANVIVAKCLVENLKWTFQTDIDVV-CDFPGQYLQDITYI 527
+A + ++Y + V+ N I+AK LVE+ ++ + VV DF G L+ ++
Sbjct: 260 AVALHAEIDYQLVQVQSDRGTQNFILAKDLVESAIARYKLENPVVLADFKGAVLEHLSLQ 319
Query: 528 HPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSP 587
HP+ + R + ++ V ++ GTG VH AP HG DD+ + L + V N + G Y P
Sbjct: 320 HPLLAD-RQVPVILGEHVIATSGTGAVHTAPGHGADDYKVGLIYNLKVDNPVGGNGVYLP 378
Query: 588 DAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFI-- 644
A P G +I + L LW HSYP+ WR K P+I +A+ QWFI
Sbjct: 379 TA-PIFSGEHIYKANPQIIEALGAVGRLWAHQPIVHSYPHCWRHKTPIIFRATPQWFISM 437
Query: 645 DTERIKPEALACLE-EVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGDTII 703
D + ++ AL +E +++FVP+ K + I RP WCISRQR WGVPIP F DT
Sbjct: 438 DAKGLRECALNAIENDISFVPDWGKNRIESMIEGRPDWCISRQRTWGVPIPFFVHKDTHE 497
Query: 704 VNEAN---IKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISWS 760
++ I+ LI++ G D W++ + + N + D LD+WFDSG +
Sbjct: 498 LHPRTAELIEEVAELIEKEGIDAWFNREAKDFIGADAEQYNAVR--DTLDVWFDSGTTHY 555
Query: 761 HVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKM 815
VL+ + PA +Y+EG DQ GWF SSLLTS+A+ AP++ + HGFVVDEKG KM
Sbjct: 556 AVLRQREELTDPADLYLEGSDQHRGWFQSSLLTSIAINERAPYKGLLTHGFVVDEKGRKM 615
Query: 816 SKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHAS 875
SKS+GN+I+ DI + G D LR+W+A+
Sbjct: 616 SKSLGNIITPQDIIKD-----------------------------MGADGLRFWIASSDY 646
Query: 876 KDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLC 931
+ + GK I + + D ++IR++LR+LL L+ ST ++ +D Y+L+R
Sbjct: 647 R-YEMTAGKEIFSRASDGYRRIRNTLRFLLANLNGFKPSTDALPVDQLIALDQYILQRAV 705
Query: 932 EFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLH 991
E Q T+ Y + + L NF +N+L FY ++KDR Y + +AR S L+
Sbjct: 706 EVQKTIQQAYEDMNFHIVCSALTNFCINDLGGFYLDIIKDRQYTTKADSQARHSAQTALY 765
Query: 992 NIFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
++ R +API+ A+E + +P +
Sbjct: 766 HLVQAFARWMAPILSFTAQEAWPLIPEQ 793
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 230/439 (52%), Gaps = 25/439 (5%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
+Y R A GK +++LHDGPPYANG H+GHAVNK+LKDI ++S ++ G YVPGWD
Sbjct: 46 IYQKIRAARIGKKKYVLHDGPPYANGQIHLGHAVNKVLKDIIVKSRVMDGFDSPYVPGWD 105
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
CHGLPIELK K+ +D RK + +A+ ++ Q+ +F GV DW+ + Y
Sbjct: 106 CHGLPIELKVEEKVGKVGVKVDASTFRKACREYAMSQVDLQRKDFIRMGVFGDWQ-DPYL 164
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSI---Y 180
T + + + + + K +I LKPV W +ALAE+E+EY+ D S +I +
Sbjct: 165 TMNFKQEADIVRALGEIQKAGHIEPGLKPVNWCIDCGSALAEAEVEYE-DKKSDAIDVGF 223
Query: 181 LKIKLNQVPAHL-LEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG----ANV 235
+ LN + L +E +IWTTTPW+LPANQ +A + ++Y + V+ N
Sbjct: 224 GVVDLNDLGQRLNVEVTAPTDIVIWTTTPWTLPANQAVALHAEIDYQLVQVQSDRGTQNF 283
Query: 236 IVAKCLVESLKWTFQTDIEVV-CDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGT 294
I+AK LVES ++ + VV DF G L+ ++ HP+ + R + ++ V ++ GT
Sbjct: 284 ILAKDLVESAIARYKLENPVVLADFKGAVLEHLSLQHPLLAD-RQVPVILGEHVIATSGT 342
Query: 295 GLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVE 354
G VH AP HG DD+ + L + V N + G Y P A P G +I + L
Sbjct: 343 GAVHTAPGHGADDYKVGLIYNLKVDNPVGGNGVYLPTA-PIFSGEHIYKANPQIIEALGA 401
Query: 355 PDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNILGRVGITH 413
LW HSYP+ WR K P+I +A+ QWFI + + N + V
Sbjct: 402 VGRLWAHQPIVHSYPHCWRHKTPIIFRATPQWFISMDAKGLRECALNAIENDISFV---- 457
Query: 414 DRP--GTALAESELEYKPD 430
P G ES +E +PD
Sbjct: 458 --PDWGKNRIESMIEGRPD 474
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 1107 NLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVI 1165
N + G Y P A P G +I + L LW HSYP+ WR K P+I
Sbjct: 368 NPVGGNGVYLPTA-PIFSGEHIYKANPQIIEALGAVGRLWAHQPIVHSYPHCWRHKTPII 426
Query: 1166 LKASQQWFI--DTERIKPEALACLEG-VNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
+A+ QWFI D + ++ AL +E ++FVP+ K + I RP WCISRQR WGVP
Sbjct: 427 FRATPQWFISMDAKGLRECALNAIENDISFVPDWGKNRIESMIEGRPDWCISRQRTWGVP 486
Query: 1223 IPVFYDGDTIIVNEAN---IKHFCTLIDEHGPDFWWSLPVEQLLNTSDVNSNVTK 1274
IP F DT ++ I+ LI++ G D W++ + + N +
Sbjct: 487 IPFFVHKDTHELHPRTAELIEEVAELIEKEGIDAWFNREAKDFIGADAEQYNAVR 541
>gi|422883612|ref|ZP_16930061.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK49]
gi|332362885|gb|EGJ40678.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK49]
Length = 930
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 207/636 (32%), Positives = 322/636 (50%), Gaps = 54/636 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F D+ V+ + GQ L I HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWADVQVLATYRGQELNQIVTAHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQY 1035
+ PI+PH AEE++S+L + F L +
Sbjct: 755 LLTPILPHTAEEIWSYLEHEEEEFVQLSELPEALTF 790
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP+FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPQFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWADVQVLATYRGQELNQIVTAHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|295113823|emb|CBL32460.1| Isoleucyl-tRNA synthetase [Enterococcus sp. 7L76]
Length = 926
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 338/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 247 PDFTYVEVKADGRKFVIAKDLLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 305 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 364 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 482 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 541
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 542 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 602 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 632 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 692 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y ++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLQEEE-EYVQLAEFPGYETFT 789
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 99 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 158 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 217 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 273
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 274 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 331
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 332 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 389
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 390 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 422
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 502
>gi|374997213|ref|YP_004972712.1| isoleucyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
gi|357215579|gb|AET70197.1| isoleucyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
Length = 923
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 324/623 (52%), Gaps = 60/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIK----LNQVPAHLLEGATDLHALIWTTTPWSLPANQF 473
TALAE+E+EY D + +IY+K LN +P + + +IWTTTPW+LPAN
Sbjct: 192 TALAEAEIEY-ADKSATAIYVKFAVKDGLNVLPQE------NTYIVIWTTTPWTLPANLA 244
Query: 474 IAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
I+ +P L+Y++ S +VA+ ++++L+ ++ D+ V F G+ L+ I +P+
Sbjct: 245 ISVHPELKYALVSANKERWVVAEGMLDSLRSLWKMDLPVEKTFKGKELEHINCKNPLM-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD K++ V+ GTG VH APAHG+DDF + +PVL + +QGK++ + G
Sbjct: 303 DRDSKVICGEHVTLEAGTGCVHTAPAHGEDDFYVGKKYGLPVLCPVDHQGKFTSEGG-AY 361
Query: 594 EGLNILGDGKDQVLHLV-EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
GL V L D++ E HSYP+ WR K P+I +A++QWF + +
Sbjct: 362 AGLKTAKANPVIVEDLKGSRDLVLEEIIDHSYPHCWRCKSPIIFRATEQWFASIDGFRQA 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIK 710
L +E+V ++P + + + IA R WCISRQR WGVPIP+FY D ++VN+ I
Sbjct: 422 TLTEIEKVRWIPAWGRDRIYNMIADRGDWCISRQRTWGVPIPIFYCEDCGKVLVNDETIA 481
Query: 711 HFCTLIDEHGPDFWWSLSVEQLLNTSDV----NSNVTKSNDILDIWFDSGISWSHVLKDK 766
G D W++ S +LL K DI+D+WFDSG S VLK +
Sbjct: 482 KVQDYFRCEGSDAWFAHSALELLPEGTTCECGGKTFRKETDIMDVWFDSGTSHVGVLKQR 541
Query: 767 P-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
P A +Y+EG DQ GWF SSL TSVA AP+RNV HGFVVDE+G KMSKS+GN
Sbjct: 542 PELSWPADLYLEGSDQHRGWFNSSLSTSVAAFGQAPYRNVLTHGFVVDEQGRKMSKSLGN 601
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
+ + Q G D+LR WV++ K+ V
Sbjct: 602 GVDPLKVVQ-----------------------------ELGADILRLWVSSVDYKN-DVA 631
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTM 937
I+ + +KIR+++R+LL L++ + ++ + +D + L +L + +
Sbjct: 632 ASPRIMKQMSEAYRKIRNTMRFLLSNLNDFEPAKDKVAYPELQEIDRWALLKLSKVVERV 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
T Y +++ A + NF ELSA Y +VKDRLY + R S L+ + L
Sbjct: 692 LTGYETYEFHWAYHTIHNFCTIELSAVYLDIVKDRLYVEGKTSLLRRSAQTVLYEVLDAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+R +API+ + E++ ++P +
Sbjct: 752 VRLLAPILSFMTHEIWPYIPGEK 774
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 236/402 (58%), Gaps = 19/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY ++A G P+FILHDGPPYANG H+GHA+NK+LKDI ++ ++G YVPG
Sbjct: 34 EKLYEKVQKAREGCPKFILHDGPPYANGDIHLGHAINKVLKDIIVKYKTMKGYDAPYVPG 93
Query: 65 WDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WD HGLPIE +K + +S L+ R+K +++A + + Q+ EF+ GV DW+H
Sbjct: 94 WDTHGLPIEQQVIKKLGVNRHAVSALEFRQKCQDYAKKYVGIQREEFKRLGVRGDWDHP- 152
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T KEY Q+ F ++ K+ YIY+ LKPVYW PS TALAE+E+EY D + +IY+
Sbjct: 153 YMTLQKEYEAAQIGVFGDMTKKGYIYKGLKPVYWCPSCETALAEAEIEY-ADKSATAIYV 211
Query: 182 KIK----LNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIV 237
K LN +P + + +IWTTTPW+LPAN I+ +P L+Y++ S +V
Sbjct: 212 KFAVKDGLNVLPQE------NTYIVIWTTTPWTLPANLAISVHPELKYALVSANKERWVV 265
Query: 238 AKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
A+ +++SL+ ++ D+ V F G+ L+ I +P+ RD K++ V+ GTG V
Sbjct: 266 AEGMLDSLRSLWKMDLPVEKTFKGKELEHINCKNPLM--DRDSKVICGEHVTLEAGTGCV 323
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLV-EPD 356
H APAHG+DDF + +PVL + +QGK++ + G GL V L D
Sbjct: 324 HTAPAHGEDDFYVGKKYGLPVLCPVDHQGKFTSEGG-AYAGLKTAKANPVIVEDLKGSRD 382
Query: 357 VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALV 398
++ E HSYP+ WR K P+I +A++QWF + + L
Sbjct: 383 LVLEEIIDHSYPHCWRCKSPIIFRATEQWFASIDGFRQATLT 424
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 4/158 (2%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLV-EPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ +QGK++ + G GL V L D++ E HSYP+ WR K P+I +
Sbjct: 348 VDHQGKFTSEGG-AYAGLKTAKANPVIVEDLKGSRDLVLEEIIDHSYPHCWRCKSPIIFR 406
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
A++QWF + + L +E V ++P + + + IA R WCISRQR WGVPIP+FY
Sbjct: 407 ATEQWFASIDGFRQATLTEIEKVRWIPAWGRDRIYNMIADRGDWCISRQRTWGVPIPIFY 466
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D ++VN+ I G D W++ +LL
Sbjct: 467 CEDCGKVLVNDETIAKVQDYFRCEGSDAWFAHSALELL 504
>gi|256852656|ref|ZP_05558027.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
gi|300859774|ref|ZP_07105862.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|428766511|ref|YP_007152622.1| isoleucyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
gi|256712001|gb|EEU27038.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
gi|300850592|gb|EFK78341.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|427184684|emb|CCO71908.1| isoleucyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
Length = 926
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 338/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 247 PDFTYVEVKADGRKFVIAKDLLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 305 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 364 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 482 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 541
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 542 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 602 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 632 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 692 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y ++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLQEEE-EYVQLAEFPGYETFT 789
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 99 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 158 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 217 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 273
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 274 AVGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 331
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 332 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 389
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 390 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 422
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 502
>gi|125717516|ref|YP_001034649.1| isoleucyl-tRNA synthetase [Streptococcus sanguinis SK36]
gi|166229774|sp|A3CLP4.1|SYI_STRSV RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|125497433|gb|ABN44099.1| Isoleucyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
Length = 930
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 321/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F D+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWADVQVLATYRGQELNHIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANDLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R +++ + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDIVYIEAAKSLERRQMQTVFYDVLVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L + F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEEEEF 778
Score = 265 bits (678), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWADVQVLATYRGQELNHIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANDLEVFVTVNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|227555113|ref|ZP_03985160.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|257418593|ref|ZP_05595587.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
gi|307268083|ref|ZP_07549471.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
gi|307275486|ref|ZP_07556628.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
gi|312952725|ref|ZP_07771587.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
gi|384512700|ref|YP_005707793.1| isoleucine--tRNA ligase [Enterococcus faecalis OG1RF]
gi|422692293|ref|ZP_16750315.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0031]
gi|422705613|ref|ZP_16763409.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0043]
gi|422711805|ref|ZP_16768732.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0027]
gi|422713482|ref|ZP_16770232.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309A]
gi|422717491|ref|ZP_16774175.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309B]
gi|422727527|ref|ZP_16783968.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0312]
gi|422735189|ref|ZP_16791463.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1341]
gi|227175781|gb|EEI56753.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|257160421|gb|EEU90381.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
gi|306507874|gb|EFM77002.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
gi|306515724|gb|EFM84251.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
gi|310629241|gb|EFQ12524.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
gi|315034232|gb|EFT46164.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0027]
gi|315153079|gb|EFT97095.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0031]
gi|315156852|gb|EFU00869.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0043]
gi|315157638|gb|EFU01655.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0312]
gi|315168031|gb|EFU12048.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1341]
gi|315574253|gb|EFU86444.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309B]
gi|315581592|gb|EFU93783.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309A]
gi|327534589|gb|AEA93423.1| isoleucine--tRNA ligase [Enterococcus faecalis OG1RF]
Length = 933
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 333/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLTTVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 281 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|29375585|ref|NP_814739.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
gi|257421252|ref|ZP_05598242.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
gi|294779257|ref|ZP_06744661.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
gi|81437154|sp|Q836V1.1|SYI_ENTFA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|29343046|gb|AAO80809.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
gi|257163076|gb|EEU93036.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
gi|294453624|gb|EFG22022.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
Length = 926
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 338/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 247 PDFTYVEVKADGRKFVIAKDLLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 305 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 364 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPET-IEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 482 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 541
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 542 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 602 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 632 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 692 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y ++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLQEEE-EYVQLAEFPGYETFT 789
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 99 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 158 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 217 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLTTVKE 273
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 274 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 331
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 332 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 389
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 390 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 422
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 502
>gi|256960187|ref|ZP_05564358.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
gi|293382552|ref|ZP_06628486.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
gi|293387847|ref|ZP_06632386.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
gi|312901038|ref|ZP_07760329.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
gi|312906845|ref|ZP_07765842.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
gi|312978900|ref|ZP_07790626.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
gi|256950683|gb|EEU67315.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
gi|291080100|gb|EFE17464.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
gi|291082694|gb|EFE19657.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
gi|310627099|gb|EFQ10382.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
gi|311288337|gb|EFQ66893.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
gi|311291864|gb|EFQ70420.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
Length = 933
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 333/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 281 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|301063341|ref|ZP_07203880.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
gi|300442504|gb|EFK06730.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
Length = 932
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 328/622 (52%), Gaps = 57/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHL--LEGATDLHALIWTTTPWSLPANQFIA 475
TALAE+E+EY +H S SI++K + A + + + +IWTTTPW+LPAN IA
Sbjct: 192 TALAEAEVEYD-EHSSPSIFVKFPMISDLAEVDPVFKGKQVSVVIWTTTPWTLPANLAIA 250
Query: 476 FNPALEY-SVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKE 533
+P Y +V + + +I+A+ L+ TF +++ F L+++ HPI +
Sbjct: 251 LHPDFPYVAVETAENQVMILAEGLLTECMETFGIASYEILKTFHATELENLEARHPIYER 310
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
+ L P +V+ GTG VH AP HG++D+ L + V + + + G+++PD
Sbjct: 311 PSVIVLAP--YVTLESGTGCVHTAPGHGREDYETGLKYGLEVYSPVDDAGRFTPDV-EHF 367
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILKASQQWFIDTER--IK 650
G+ + + + L+ VL E H YP+ WR KKPVI ++++QWFI ++ ++
Sbjct: 368 SGMEVFEANRSVIDKLISLGVLVKEQKIAHEYPHCWRCKKPVIFRSTEQWFISMDKTGLR 427
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
AL + EVN++P + + IA RP WCISRQR WGVPI VF+ +++++
Sbjct: 428 DAALKAINEVNWIPSWGRDRIYSMIANRPDWCISRQRSWGVPITVFFCRKCGEVVISQEI 487
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVL 763
I H +++ G D W++ S +LL + + + K DILD+WFDSG+S++ V+
Sbjct: 488 IDHVAEMVEASGADVWFTASEGELLPENTICPACGEKDFEKETDILDVWFDSGVSYAAVM 547
Query: 764 K-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ D PA +Y+EG DQ GWF SSLL SV ++ AP+ NV HGFVVD KG M KS
Sbjct: 548 ENRPYLDSPADLYLEGSDQHRGWFHSSLLCSVGTRNQAPYGNVLTHGFVVDGKGKAMHKS 607
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
GNVI + + +YG ++LR WVA +D
Sbjct: 608 AGNVIPPESLIK-----------------------------SYGAEILRLWVAGEDYRD- 637
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
+ + K IL D ++IR++ RYLLG L ++ T + +D + L +L
Sbjct: 638 NIRLSKEILQRLTDAYRRIRNTCRYLLGNLQDYDPETDVVPYGQMDELDQWALHQLQGLN 697
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
+ + + Y F++ L NF V +LS+FY ++KDRLY +R S ++ I
Sbjct: 698 DRIMSAYESFEFHLVYHHLHNFCVLDLSSFYLDIIKDRLYTSPQTAISRRSAQFAMNEIL 757
Query: 995 HVLLRTVAPIMPHLAEEVYSHL 1016
L+R +AP++ A+E++ ++
Sbjct: 758 ETLVRLMAPVLSFTADEIWQYM 779
Score = 249 bits (637), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 224/408 (54%), Gaps = 13/408 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY RE +P+++LHDGPPYANG H+G A NK+LKDI ++S + G V YVPGW
Sbjct: 35 KLYETIREVSKERPKYMLHDGPPYANGNIHMGTAFNKVLKDIIIKSKQMAGFDVPYVPGW 94
Query: 66 DCHGLPIELKA---ITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
DCHGLPIE K + K + ++ +IR + +A + ++ Q+AEF+ GVL +W+ Y
Sbjct: 95 DCHGLPIEHKVDGELGEKKREMTQAEIRGHCRRYAEKYVDIQRAEFKRLGVLGEWDRP-Y 153
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T + Y + +F + R KP+YW S +TALAE+E+EY +H S SI++K
Sbjct: 154 LTMNYPYEATIVREFGKFALNGSLVRSKKPIYWCTSCKTALAEAEVEYD-EHSSPSIFVK 212
Query: 183 IKLNQVPAHL--LEGATDLHALIWTTTPWSLPANQFIAFNPALEY-SVASVKGANVIVAK 239
+ A + + + +IWTTTPW+LPAN IA +P Y +V + + +I+A+
Sbjct: 213 FPMISDLAEVDPVFKGKQVSVVIWTTTPWTLPANLAIALHPDFPYVAVETAENQVMILAE 272
Query: 240 CLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 298
L+ TF E++ F L+++ HPI + + L P +V+ GTG VH
Sbjct: 273 GLLTECMETFGIASYEILKTFHATELENLEARHPIYERPSVIVLAP--YVTLESGTGCVH 330
Query: 299 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG++D+ L + V + + + G+++PD G+ + + + L+ VL
Sbjct: 331 TAPGHGREDYETGLKYGLEVYSPVDDAGRFTPDV-EHFSGMEVFEANRSVIDKLISLGVL 389
Query: 359 WTEN-YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVCKTVGNI 405
E H YP+ WR KKPVI ++++QWFI ++ K + +
Sbjct: 390 VKEQKIAHEYPHCWRCKKPVIFRSTEQWFISMDKTGLRDAALKAINEV 437
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTEN-YQHSYPYDWRTKKPVILK 1167
+ + G+++PD G+ + + + L+ VL E H YP+ WR KKPVI +
Sbjct: 354 VDDAGRFTPDV-EHFSGMEVFEANRSVIDKLISLGVLVKEQKIAHEYPHCWRCKKPVIFR 412
Query: 1168 ASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
+++QWFI ++ ++ AL + VN++P + + IA RP WCISRQR WGVPI V
Sbjct: 413 STEQWFISMDKTGLRDAALKAINEVNWIPSWGRDRIYSMIANRPDWCISRQRSWGVPITV 472
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F+ +++++ I H +++ G D W++ +LL
Sbjct: 473 FFCRKCGEVVISQEIIDHVAEMVEASGADVWFTASEGELL 512
>gi|366053396|ref|ZP_09451118.1| isoleucyl-tRNA synthetase [Lactobacillus suebicus KCTC 3549]
Length = 932
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 202/624 (32%), Positives = 320/624 (51%), Gaps = 66/624 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E++YK D S S + ++ L + + ++WTTTPW++P ++ I +
Sbjct: 191 SALAEAEVDYK-DVTSPSAFYGEQVVDGKGVLDDNT---YMVVWTTTPWTIPGSEGITID 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
+Y+V + G + ++A LV F+ D+ ++ G+ L +T HP E+
Sbjct: 247 ATFDYAVVTHSGDDRKFVLAAELVNKCAELFEWEDVKILKTVKGKDLDRVTAQHPFFPEK 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+ + +L FV+ GTGLVH AP G+DD+ + + + + +QG + +AGP E
Sbjct: 307 KLVTML-GDFVTLDAGTGLVHTAPGFGEDDYYVGKQYGLDIFVPVNDQGYLTKEAGPDFE 365
Query: 595 GLNI-------LGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 647
G+ L KDQ L L + +HSYP+DWRTKKP+I +A+ QWF +
Sbjct: 366 GVFYDDANQISLDKLKDQGLLLKYMPI------KHSYPFDWRTKKPIIFRATDQWFASVD 419
Query: 648 RIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNE 706
+I+ E L+ +++V F P K L + I R W ISRQRVWGVP+P+FY D T I+ E
Sbjct: 420 KIRDEILSAIDDVKFYPSWGKVRLHNMIKDRGDWVISRQRVWGVPLPIFYGEDGTAIMTE 479
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
I H L EHG + W+ + LL + N TK NDI+D+WFDSG S
Sbjct: 480 ETINHVADLFAEHGSNVWFDREAKDLLPEGFTSEHSPNGKFTKENDIMDVWFDSGSSHQA 539
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL ++ P+ +YMEG DQ GWF SSL+TSVA+ AP++++ GF +D +G KMS
Sbjct: 540 VLAERENLTYPSDMYMEGSDQYRGWFNSSLITSVAVSGHAPYKSILSQGFTLDGEGRKMS 599
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS+GN I + + + G +++R WV + S
Sbjct: 600 KSIGNTIEPNKVVK-----------------------------QMGAEIIRLWVMSVDSS 630
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
V + I + +K R+++R+LL + S+ VD +ML +L E
Sbjct: 631 -ADVRVSMEIFKQVSESYRKFRNTMRFLLANTTDFDPEKDSLKYDDLESVDKFMLVKLNE 689
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
F + + + +++ + L+NFV ELSAFY + KD +Y D N + R S +
Sbjct: 690 FVESTEKHFDNYEFLDIYKQLMNFVTTELSAFYMNVAKDVVYIDGANSKTRRSMQTVFYK 749
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHL 1016
+ + + + P++PH EE++ +L
Sbjct: 750 VLVTMTKLLTPVLPHTTEEIWQYL 773
Score = 265 bits (678), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 228/404 (56%), Gaps = 33/404 (8%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KDI +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPTFVLHDGPPYANGNIHIGHALNKITKDIIVRYKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L + K ++ D R + +ALE ++ Q+ +F+ GV +W +N Y T K
Sbjct: 99 LPIEQQLTKMGYDRKKMNTSDFRDLCRKYALEQVDKQREDFKRLGVAGEW-NNPYLTLQK 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY Q+ F K+ +YR KPV+WS SS +ALAE+E++YK D S S + ++
Sbjct: 158 EYEAAQVRVFGAFAKRGLLYRGKKPVFWSWSSESALAEAEVDYK-DVTSPSAFYGEQVVD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKG-------ANVIVAKC 240
L + + + ++WTTTPW++P ++ I + +Y+V + G A +V KC
Sbjct: 217 GKGVLDD---NTYMVVWTTTPWTIPGSEGITIDATFDYAVVTHSGDDRKFVLAAELVNKC 273
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
E +W D++++ G+ L +T HP E++ + +L FV+ GTGLVH A
Sbjct: 274 -AELFEW---EDVKILKTVKGKDLDRVTAQHPFFPEKKLVTML-GDFVTLDAGTGLVHTA 328
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNI-------LGDGKDQVLHLV 353
P G+DD+ + + + + +QG + +AGP EG+ L KDQ L L
Sbjct: 329 PGFGEDDYYVGKQYGLDIFVPVNDQGYLTKEAGPDFEGVFYDDANQISLDKLKDQGLLLK 388
Query: 354 EPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ +HSYP+DWRTKKP+I +A+ QWF ++I+ E L
Sbjct: 389 YMPI------KHSYPFDWRTKKPIIFRATDQWFASVDKIRDEIL 426
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 91/163 (55%), Gaps = 14/163 (8%)
Query: 1109 ITNQGKYSPDAGPGLEGLNI-------LGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTK 1161
+ +QG + +AGP EG+ L + KDQ L L + +HSYP+DWRTK
Sbjct: 350 VNDQGYLTKEAGPDFEGVFYDDANQISLDKLKDQGLLLKYMPI------KHSYPFDWRTK 403
Query: 1162 KPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGV 1221
KP+I +A+ QWF ++I+ E L+ ++ V F P K L + I R W ISRQRVWGV
Sbjct: 404 KPIIFRATDQWFASVDKIRDEILSAIDDVKFYPSWGKVRLHNMIKDRGDWVISRQRVWGV 463
Query: 1222 PIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
P+P+FY D T I+ E I H L EHG + W+ + LL
Sbjct: 464 PLPIFYGEDGTAIMTEETINHVADLFAEHGSNVWFDREAKDLL 506
>gi|256617927|ref|ZP_05474773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
gi|256962571|ref|ZP_05566742.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|256597454|gb|EEU16630.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
gi|256953067|gb|EEU69699.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
Length = 928
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 338/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 193 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 249 PDFTYVEVKADGRKFVIAKDLLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 307 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 365
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 366 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 425 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 543
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 544 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 604 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 634 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 693
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 694 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 753
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y ++
Sbjct: 754 TKLLTPIIPHTAEEIWSFLQEEE-EYVQLAEFPGYETFT 791
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 41 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 100
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 101 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 159
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 160 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 218
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 219 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 275
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 276 AVGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 333
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 334 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 392 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 349 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 406
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 407 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 466
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 467 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 504
>gi|422685581|ref|ZP_16743797.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4000]
gi|315029692|gb|EFT41624.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4000]
Length = 933
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 333/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQQIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 281 AVGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|255974072|ref|ZP_05424658.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
gi|255966944|gb|EET97566.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
Length = 928
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 333/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 193 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 249 PDFTYVEVKADGRKFVIAKDLLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 307 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 365
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 366 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 425 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 543
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 544 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 604 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 634 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 693
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 694 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 753
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 754 TKLLTPIIPHTAEEIWSFLQEEE 776
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 41 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 100
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 101 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 159
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 160 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 218
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 219 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 275
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 276 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 333
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 334 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 392 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 349 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 406
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 407 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 466
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 467 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 504
>gi|422821711|ref|ZP_16869904.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK353]
gi|324990662|gb|EGC22598.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK353]
Length = 930
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 206/624 (33%), Positives = 321/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F D+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSEKFGWADVQVLATYRGQELNHIMTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------HFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIRFNQLVETIRN 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L + F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEEEEF 778
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWADVQVLATYRGQELNHIMTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|255715375|ref|XP_002553969.1| KLTH0E11352p [Lachancea thermotolerans]
gi|238935351|emb|CAR23532.1| KLTH0E11352p [Lachancea thermotolerans CBS 6340]
Length = 985
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 324/650 (49%), Gaps = 76/650 (11%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPA------HLLEGATDLHALIWTTTPWSLPAN 471
TALAE ELEY +H+S S Y+K+ A + L L LIWT+TPW+L +N
Sbjct: 217 TALAEGELEYNDNHVSTSAYVKLPFASKSADAVRRHYSLNSDIPLSFLIWTSTPWTLFSN 276
Query: 472 QFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI- 530
Q I +N Y + V+G ++V L E L Q + G+ LQ + Y P
Sbjct: 277 QAICYNEKFSYGIYKVEGEYLVVESGLKEAL---LQPEHKATAMLTGKELQGLKYTIPFL 333
Query: 531 -NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDA 589
N E+ LL V+ GTGLVH AP HG DD+L+ + K+ V + + ++G+Y +
Sbjct: 334 GNDEK---PLLHGEHVTKLSGTGLVHTAPGHGFDDYLIGITNKLEVFSPVDDEGRYKLEL 390
Query: 590 GPGL---------EGL--NILGDGKDQ-VLHLVEPD--VLWTENYQHSYPYDWRTKKPVI 635
P GL +L +G + +L L+ +L E Y HSYPYDWR+KKPV+
Sbjct: 391 LPQELHKDLIEPETGLPRRVLSEGTTKTILKLLTKQGLLLKAEKYVHSYPYDWRSKKPVL 450
Query: 636 LKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPV 695
++A+ QWF D +K AL LE V F P K L I R WCISRQR WGVPIP
Sbjct: 451 IRATPQWFADLTDVKKSALESLENVRFHPGRGKTRLASFIKSRSEWCISRQRSWGVPIPA 510
Query: 696 FYDGDT---IIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSND 747
F+ D +++NE ++H +ID+ G D W+ + D++ + D
Sbjct: 511 FHKVDNHEEVLMNEEVVEHVLGVIDKKGIDSWFKEDNSDIAEWLPSRYKDISHLFQRGRD 570
Query: 748 ILDIWFDSGISWSHV---------LKDKP---AHVYMEGMDQINGWFMSSLLTSVALKH- 794
+D+WFDSG +W+ + L + P A VY+EG DQ GWF SSLLT +A
Sbjct: 571 TVDVWFDSGSTWNVLEDFYTQRLKLTEMPYPLADVYLEGSDQHRGWFQSSLLTKIATSEQ 630
Query: 795 -TAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQ 853
AP+ V HGF +DE+G KMSKS+GN IS + +G +K
Sbjct: 631 AAAPYGTVITHGFTLDERGIKMSKSIGNTISPETVIRGDEK------------------- 671
Query: 854 GAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSE 913
K +PA GVD LR + + A V IG + + ++K+R + +++LG L
Sbjct: 672 --KGIPALGVDGLRLLI-SQADFTTDVTIGPTVTKHVAEALKKLRLTFKFILGNLSTTEN 728
Query: 914 STGSIS----RYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLV 969
S + R VD + + +L + + + T Y + +++ L + N+LSAFYF +
Sbjct: 729 SNMLLPFEKLRAVDQFTICKLKKLSDEVQTYYDSYNFSKVVTTTLYHMNNQLSAFYFDIT 788
Query: 970 KDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPSR 1019
KD LYCD + R TL ++ + PI P L +E ++HL ++
Sbjct: 789 KDSLYCDRPDSLKRRQIQTTLFHVLDTYRCILGPITPILVQESWNHLETK 838
Score = 282 bits (722), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 166/402 (41%), Positives = 226/402 (56%), Gaps = 32/402 (7%)
Query: 21 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITSK 80
F+LHDGPPYANG H+GHA+NK LKDI R LL+GK ++Y PGWDCHGLPIELKA+
Sbjct: 75 FVLHDGPPYANGDLHLGHAMNKTLKDIINRYQLLKGKFIYYKPGWDCHGLPIELKALQKL 134
Query: 81 DKLLS---PLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQLCQF 137
K S P IR+ A A +TI +QK +F+ + +L DWE + Y T K + NQL
Sbjct: 135 GKDGSNMLPTKIRRVASQHAQKTIKSQKEQFQQFAILTDWE-DRYETMQKSFELNQLGVL 193
Query: 138 YNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPA------H 191
+ + I R KPVYW +RTALAE ELEY +HVS S Y+K+ A +
Sbjct: 194 KEMIRVGLIKRQNKPVYWGSETRTALAEGELEYNDNHVSTSAYVKLPFASKSADAVRRHY 253
Query: 192 LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQT 251
L L LIWT+TPW+L +NQ I +N Y + V+G ++V L E+L Q
Sbjct: 254 SLNSDIPLSFLIWTSTPWTLFSNQAICYNEKFSYGIYKVEGEYLVVESGLKEAL---LQP 310
Query: 252 DIEVVCDFPGQYLQDITYIHPI--NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFL 309
+ + G+ LQ + Y P N E+ LL V+ GTGLVH AP HG DD+L
Sbjct: 311 EHKATAMLTGKELQGLKYTIPFLGNDEK---PLLHGEHVTKLSGTGLVHTAPGHGFDDYL 367
Query: 310 LALAEKIPVLNLITNQGKYSPDAGPG---------LEGL--NILGDGKDQ-VLHLVEPD- 356
+ + K+ V + + ++G+Y + P GL +L +G + +L L+
Sbjct: 368 IGITNKLEVFSPVDDEGRYKLELLPQELHKDLIEPETGLPRRVLSEGTTKTILKLLTKQG 427
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L E Y HSYPYDWR+KKPV+++A+ QWF D +K AL
Sbjct: 428 LLLKAEKYVHSYPYDWRSKKPVLIRATPQWFADLTDVKKSAL 469
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Query: 1128 ILGEGKDQ-VLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 1184
+L EG + +L L+ +L E Y HSYPYDWR+KKPV+++A+ QWF D +K AL
Sbjct: 410 VLSEGTTKTILKLLTKQGLLLKAEKYVHSYPYDWRSKKPVLIRATPQWFADLTDVKKSAL 469
Query: 1185 ACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGDT---IIVNEANIKH 1241
LE V F P K L I R WCISRQR WGVPIP F+ D +++NE ++H
Sbjct: 470 ESLENVRFHPGRGKTRLASFIKSRSEWCISRQRSWGVPIPAFHKVDNHEEVLMNEEVVEH 529
Query: 1242 FCTLIDEHGPDFWW 1255
+ID+ G D W+
Sbjct: 530 VLGVIDKKGIDSWF 543
>gi|425046435|ref|ZP_18450451.1| isoleucine--tRNA ligase [Enterococcus faecium 510]
gi|403024298|gb|EJY36468.1| isoleucine--tRNA ligase [Enterococcus faecium 510]
Length = 932
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 210/639 (32%), Positives = 335/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SI++ + E D +IWTTTPW+LPANQ IA N
Sbjct: 191 SSLAEAEIEYK-DVKSPSIFVAFNVKDGKDIFDE---DTAFVIWTTTPWTLPANQGIAVN 246
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y + G +VAK L+E ++ ++ V+ +F GQ ++ +T HP +R+
Sbjct: 247 PKFTYVLVEADGRKFVVAKDLLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERE 304
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++ K+ V++ + ++G ++ +A PG EG+
Sbjct: 305 SLVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI 363
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L++ +L + + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 364 -FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V +V K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 423 DEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 481
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDKP 767
L EHG W+ ++LL + N TK DI+D+WFDSG S VL+ +P
Sbjct: 482 AKLFAEHGSIIWFEKEAKELLPEGFTHPGSPNGEFTKEKDIMDVWFDSGSSHEAVLRQRP 541
Query: 768 -----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
A +Y+EG DQ GWF SS+ TSVA+ AP+++V GF +D +G KMSKS+GN+
Sbjct: 542 ELSFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNI 601
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I+ + + +G D+LR WV++ + V +
Sbjct: 602 IAPEKV-----------------------------IKQFGADILRLWVSS-VDYEADVRV 631
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+IL+ + +KIR+++R+LL + ++S R VD YM RL + +
Sbjct: 632 SMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIR 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ + R + L
Sbjct: 692 EEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAEDDYQRRCMQTVFYQTAVAL 751
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y +++
Sbjct: 752 TKLLTPIIPHTAEEIWSFLKEEE-EYVQLSEFPGYEEFA 789
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 238/398 (59%), Gaps = 14/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y ++E GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPG
Sbjct: 34 NRIYQKRQELNEGKPSFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGYRAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K +S + +K + +AL ++ Q+A+F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLANKGVKRKEMSMAEYLEKCREYALSQVDKQRADFKRLGVAGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T D Y Q+ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SI++
Sbjct: 153 VTLDPSYEAAQVRVFGKMAEKSYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIFVA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLV 242
+ E D +IWTTTPW+LPANQ IA NP Y + G +VAK L+
Sbjct: 212 FNVKDGKDIFDE---DTAFVIWTTTPWTLPANQGIAVNPKFTYVLVEADGRKFVVAKDLL 268
Query: 243 ESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAP 301
E+++ ++ V+ +F GQ ++ +T HP +R+ ++ V+ GTGLVH AP
Sbjct: 269 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFY--ERESLVILGDHVTLDAGTGLVHTAP 326
Query: 302 AHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLW 359
HG+DD++ K+ V++ + ++G ++ +A PG EG+ + L++ +L
Sbjct: 327 GHGEDDYIAGSKYKLSVVSPVDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLK 384
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ + HSYP+DWRTKKPVI +A+ QWF ++ + L
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNIL 422
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ +A PG EG+ + + L++ +L + + HSYP+DWRTKKPVI
Sbjct: 347 VDSKGLFTEEA-PGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVIY 404
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF ++ + L +E V +V K L + I R W ISRQR WGVP+P+F
Sbjct: 405 RATPQWFASIDKFRQNILDEVEKVEWVIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 464
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG W+ ++LL
Sbjct: 465 YAENGEAIITPE-TIEHVAKLFAEHGSIIWFEKEAKELL 502
>gi|256761761|ref|ZP_05502341.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
gi|256683012|gb|EEU22707.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
Length = 928
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 338/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 193 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 248
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 249 PDFTYVEVKADGRKFVIAKDLLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 306
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 307 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 365
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 366 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 425 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 484 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 543
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 544 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 603
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 604 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 633
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 634 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTLRLNQVIQEIR 693
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 694 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 753
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y ++
Sbjct: 754 TKLLTPIIPHTAEEIWSFLQEEE-EYVQLAEFPGYETFT 791
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 41 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 100
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 101 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 159
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 160 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 218
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 219 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 275
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 276 AVGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 333
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 334 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 391
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 392 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 424
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 349 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 406
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 407 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 466
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 467 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 504
>gi|121998615|ref|YP_001003402.1| isoleucyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|166229742|sp|A1WY38.1|SYI_HALHL RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|121590020|gb|ABM62600.1| Isoleucyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 941
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 333/637 (52%), Gaps = 65/637 (10%)
Query: 417 GTALAESELEYKPDHISKSIYLKI----KLNQVPAHLLEG----ATDLHALIWTTTPWSL 468
G+ALAE+E+EY+ + S ++ ++ +L LLEG A +IWTTTPW+L
Sbjct: 192 GSALAEAEVEYE-ERTSPAVDVRFAVVDELALQQRVLLEGEGVQAGTASVVIWTTTPWTL 250
Query: 469 PANQFIAFNPALEYSVASVKGAN--VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITY 526
PAN+ +A +P LEY V ++ + V+ A+ L L+ +VV G L+ ++
Sbjct: 251 PANRAVAVHPELEYVVVALDHSERLVLAAELLEATLQRAGVECYEVVGRCRGADLEGLSL 310
Query: 527 IHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYS 586
HP Q + ++ V++ GTG VH AP HGQ+DF + + V N + G +
Sbjct: 311 QHPFLDRQ--VPVVLGEHVTTDGGTGCVHTAPGHGQEDFEVGQCYGLEVTNPVDGAGCFF 368
Query: 587 PDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFI 644
D GLN+ D +V+ ++E + E Y+HSYP+ WR K PVI +A+ QWFI
Sbjct: 369 EDT-EHFAGLNVF-DANPRVVEVLESRGALFHHEKYRHSYPHCWRHKTPVIFRATPQWFI 426
Query: 645 DTER--IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVF---YDG 699
D +R ++ ALA +E V ++P+ + + + RP WCISRQR WGVPI VF G
Sbjct: 427 DLDRHGMRECALAGIEGVRWMPDWGQARIDAMVRGRPDWCISRQRHWGVPIAVFIHRRSG 486
Query: 700 DTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNTSDVNSNVTKSNDILDIWFDSGISW 759
+ +++ ++ G + WW L +LL D + K DILD+WFDSG++
Sbjct: 487 EPHPQTPQHMEAVAARMEHEGLEAWWDLDPAELLG--DEAAEYEKVTDILDVWFDSGVTH 544
Query: 760 SHVLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAK 814
+ VL+ + PA +Y+EG DQ GWF SSLL+S A++ AP+R V HGF VDE+G K
Sbjct: 545 ATVLEQREGLQVPADLYLEGSDQHRGWFQSSLLSSAAIRQAAPYRGVLTHGFTVDEQGHK 604
Query: 815 MSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHA 874
MSKS GNV++ D+ + G D+LR WVA+ A
Sbjct: 605 MSKSRGNVVAPQDV-----------------------------MDRLGADILRLWVAS-A 634
Query: 875 SKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRL 930
+ + NIL + D +++R++ R+LLG LH ++ +D + + R
Sbjct: 635 DYSGEIAVSDNILQRTADAYRRMRNTARFLLGNLHGFEPGRDALVAEQLLPLDRWAVART 694
Query: 931 CEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTL 990
Q + Y ++ R +L NF V ++ FY ++KDRLY + AR SG +
Sbjct: 695 RALQERIVAAYDRYELHRIYHLLHNFCVVDMGGFYLDVLKDRLYTTPADSRARRSGQTAM 754
Query: 991 HNIFHVLLRTVAPIMPHLAEEVYSHLPS--RQGTFSS 1025
++I L+R +API+ A+E++ HLP R+ F++
Sbjct: 755 YHIAEALVRWLAPILSFTADEIWGHLPGERREPVFTA 791
Score = 253 bits (645), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 219/402 (54%), Gaps = 21/402 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+LY R A G+ FILHDGPPYANG HIGHAVNKILKDI +++ L G Y+PG
Sbjct: 35 EDLYGAIRRARAGRERFILHDGPPYANGDIHIGHAVNKILKDIIVKARTLDGYDAPYIPG 94
Query: 65 WDCHGLPIELKAITSKDK---LLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
WDCHGLPIE K K L+ R++ + FA E + Q+ +F+ GVL DWE
Sbjct: 95 WDCHGLPIEHKVEEQAGKPGAELTYAQFRERCRAFAAEQVEGQRQDFKRLGVLGDWERP- 153
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T D L +++ ++ + KPV+W +ALAE+E+EY+ + S ++ +
Sbjct: 154 YLTMDYATEAGILRALARIFEGGHVTQGFKPVHWCADCGSALAEAEVEYE-ERTSPAVDV 212
Query: 182 KI----KLNQVPAHLLEG----ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGA 233
+ +L LLEG A +IWTTTPW+LPAN+ +A +P LEY V ++ +
Sbjct: 213 RFAVVDELALQQRVLLEGEGVQAGTASVVIWTTTPWTLPANRAVAVHPELEYVVVALDHS 272
Query: 234 N--VIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSS 291
V+ A+ L +L+ EVV G L+ ++ HP Q + ++ V++
Sbjct: 273 ERLVLAAELLEATLQRAGVECYEVVGRCRGADLEGLSLQHPFLDRQ--VPVVLGEHVTTD 330
Query: 292 KGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLH 351
GTG VH AP HGQ+DF + + V N + G + D GLN+ D +V+
Sbjct: 331 GGTGCVHTAPGHGQEDFEVGQCYGLEVTNPVDGAGCFFEDT-EHFAGLNVF-DANPRVVE 388
Query: 352 LVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 391
++E + E Y+HSYP+ WR K PVI +A+ QWFID +R
Sbjct: 389 VLESRGALFHHEKYRHSYPHCWRHKTPVIFRATPQWFIDLDR 430
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 8/147 (5%)
Query: 1125 GLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTER--IK 1180
GLN+ + +V+ ++E + E Y+HSYP+ WR K PVI +A+ QWFID +R ++
Sbjct: 376 GLNVF-DANPRVVEVLESRGALFHHEKYRHSYPHCWRHKTPVIFRATPQWFIDLDRHGMR 434
Query: 1181 PEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF---YDGDTIIVNEA 1237
ALA +EGV ++P+ + + + RP WCISRQR WGVPI VF G+
Sbjct: 435 ECALAGIEGVRWMPDWGQARIDAMVRGRPDWCISRQRHWGVPIAVFIHRRSGEPHPQTPQ 494
Query: 1238 NIKHFCTLIDEHGPDFWWSLPVEQLLN 1264
+++ ++ G + WW L +LL
Sbjct: 495 HMEAVAARMEHEGLEAWWDLDPAELLG 521
>gi|300768835|ref|ZP_07078729.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300493568|gb|EFK28742.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 932
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 208/645 (32%), Positives = 321/645 (49%), Gaps = 65/645 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGA----TDLHALIWTTTPWSLPANQF 473
+ALAE+E+EY D S S + H+++G D + ++WTTTPW++PA++
Sbjct: 191 SALAEAEVEYH-DVTSPSAFYG-------EHVIDGKGVLDDDTYMVVWTTTPWTIPASEG 242
Query: 474 IAFNPALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPI 530
I + + +Y V G N V+ A+ L EN K D+ V+ G L++I HP
Sbjct: 243 ITIDASFDYVVVQPAGENRKFVLAAELLDENAKRFGWEDVQVLKTVKGAELENILCEHPF 302
Query: 531 NKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAG 590
+ R L + FV+ GTGLVH AP +G+DD+ + +P+ + ++G + +AG
Sbjct: 303 DN-SRHLVTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGKQYDLPIFAPVDDKGFLTAEAG 361
Query: 591 PGLEGLNILGDGKDQVLHLVEPDVLWTEN--YQHSYPYDWRTKKPVILKASQQWFIDTER 648
G+ D L ++ L + Y+HSYP+DWRTKKP+I +A+ QWF
Sbjct: 362 DDFAGV-FYDDANKIALDKLKAAGLLLKYMPYEHSYPFDWRTKKPIIFRATPQWFASVGD 420
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 707
++ E L +++V F PE KK L + I R W ISRQRVWGVP+P+FY D T I++E
Sbjct: 421 MRDEILKSMDDVEFFPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIFYAEDGTAIMDEV 480
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I H L ++G + W+ + LL N N TK DI+D+WFDSG S V
Sbjct: 481 TINHVADLFGKYGSNVWFERDAKDLLPDGYTNEHSPNGTFTKETDIMDVWFDSGSSHQGV 540
Query: 763 LKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
L ++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GF +D +G KMSK
Sbjct: 541 LAERSYLDYPADLYLEGSDQYRGWFNSSLITSVAVSGHAPYKQVLSQGFTLDNQGRKMSK 600
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKD 877
S+GN I+ D+ + G +++R WVA+
Sbjct: 601 SLGNTIAPADV-----------------------------IKQMGAEIVRMWVAS-VDTS 630
Query: 878 PTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEF 933
V + D +K R+++R++LG + T ++ VD YM RL EF
Sbjct: 631 SDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYEDLASVDQYMETRLNEF 690
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
Y + + + L+NF+ +LS FY + KD +Y D+ + +R S +++
Sbjct: 691 VAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAEDSHSRRSMQTVFYDV 750
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGS 1038
L + P++PH EE++ L + F+ Y+ S
Sbjct: 751 LVALTKLFTPMLPHTTEEIWPFLKEPE-EFAQLAEMPAVQNYANS 794
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 224/399 (56%), Gaps = 23/399 (5%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP FILHDGPPYANG H+GHA+NKI KD +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPSFILHDGPPYANGDIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE LK K ++ + R+ + +ALE ++ Q+ EF+ GV +W+ N Y T
Sbjct: 99 LPIEQKLKQAGYDRKKMTDNEFRELCRKYALEQVDRQRDEFKRLGVAGEWD-NPYLTLKP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ Q+ F K+ IYR KPV+WS SS +ALAE+E+EY D S S +
Sbjct: 158 EFEAAQVRVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEVEYH-DVTSPSAFYG----- 211
Query: 188 VPAHLLEGA----TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKC 240
H+++G D + ++WTTTPW++PA++ I + + +Y V G N V+ A+
Sbjct: 212 --EHVIDGKGVLDDDTYMVVWTTTPWTIPASEGITIDASFDYVVVQPAGENRKFVLAAEL 269
Query: 241 LVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
L E+ K D++V+ G L++I HP + R L + FV+ GTGLVH A
Sbjct: 270 LDENAKRFGWEDVQVLKTVKGAELENILCEHPFDN-SRHLVTMLGDFVTLDSGTGLVHTA 328
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P +G+DD+ + +P+ + ++G + +AG G+ D L ++ L
Sbjct: 329 PGYGEDDYRIGKQYDLPIFAPVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLL 387
Query: 361 EN--YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+ Y+HSYP+DWRTKKP+I +A+ QWF ++ E L
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEIL 426
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
Y+HSYP+DWRTKKP+I +A+ QWF ++ E L ++ V F PE KK L + I R
Sbjct: 392 YEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVEFFPEWGKKRLYNMIRDRG 451
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQRVWGVP+P+FY D T I++E I H L ++G + W+ + LL
Sbjct: 452 DWVISRQRVWGVPLPIFYAEDGTAIMDEVTINHVADLFGKYGSNVWFERDAKDLL 506
>gi|422699562|ref|ZP_16757426.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1342]
gi|315171940|gb|EFU15957.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1342]
Length = 933
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 334/624 (53%), Gaps = 61/624 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH-LLEGATDLHALIWTTTPWSLPANQFIAF 476
++LAE+E+EYK D S SIY + N V LL+ T +IWTTTPW+LPAN I+
Sbjct: 198 SSLAEAEIEYK-DVKSPSIY--VAFNVVDGKGLLDNETAF--VIWTTTPWTLPANLGISV 252
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 253 NPDFTYVEVKADGRKFVIAKDLLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DR 310
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG
Sbjct: 311 TSLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEG 369
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
+ + L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + +
Sbjct: 370 I-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDI 428
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 429 LDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEH 487
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 488 VANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRER 547
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 548 EELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGN 607
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
I LP EK + + G D+LR WV++ + V
Sbjct: 608 TI-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVR 637
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNT 936
+ +ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 638 VSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEI 697
Query: 937 MDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHV 996
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R +
Sbjct: 698 RENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTIFYQTLVS 757
Query: 997 LLRTVAPIMPHLAEEVYSHLPSRQ 1020
L + + PI+PH AEE++S L +
Sbjct: 758 LTKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 237/394 (60%), Gaps = 17/394 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY + N
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIY--VAFNV 221
Query: 188 VPAH-LLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLK 246
V LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 222 VDGKGLLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVK 279
Query: 247 WTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+
Sbjct: 280 EAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGE 337
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENY 363
DD++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 338 DDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFF 395
Query: 364 QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 396 THSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|315038057|ref|YP_004031625.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
gi|312276190|gb|ADQ58830.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
Length = 927
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 214/618 (34%), Positives = 321/618 (51%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YSV V +VA L++ + D VV G ++ + HPI ++
Sbjct: 248 PKFDYSVVQVGDKRYVVASGLLDKVAEEIGWDNYKVVQTVKGADMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G+DDF + +P+ + + G Y+ D P L+G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQKYNLPIFSPVDAHGCYT-DEVPELKG 363
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K + L + L + + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 364 MFYQDVDKLMIQKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASISPFRDQIL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+++ F+P K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 424 DQIDKAEFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIA 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
+ ++ G + W++ + ++LL + N TK DILD+WFDSG SWS V++ +
Sbjct: 484 KIFEKEGSNAWYTHTAKELLPDGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEKRDG 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+GNVI
Sbjct: 544 LHFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVI 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPTVPI 882
S +D+ + G +++R WVA A + D V +
Sbjct: 604 -----------------------SPNDV------IKRMGAEIIRLWVAQADTTSDVAVSM 634
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
G IL S + +KIR++ RY+L + +S R VD YM +L +
Sbjct: 635 G--ILQQSAESYRKIRNTFRYMLANTSDFDPKENRVSYDDLRSVDQYMEVKLNDLVKDCL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +F + + + NF+ N+LSAFY KD LY + + AR S +++ L
Sbjct: 693 AAYDKFDFTTVFKKVFNFISNDLSAFYLDFAKDVLYIEDQDSHARRSMQTVIYDAAVKLD 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++ L
Sbjct: 753 KILTPILPHTMEEIWGFL 770
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 217/388 (55%), Gaps = 15/388 (3%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN G P F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 34 NDLYE-QRLKLNEGHPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E I Q +F+ GV+ADW+H
Sbjct: 93 GWDTHGLPVEQQLAKKGVDRKTMDRAKYRELCRQYAEEQIQKQMTDFKRLGVMADWDH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F +YK+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITLQHDFEAQEIRVFGEMYKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + D + +IWTTTPW++PAN+ I NP +YSV V +VA L
Sbjct: 211 AFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKRYVVASGL 268
Query: 242 VESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHC 299
++ + D +VV G ++ + HPI ++ L+ GF V+ GTGLVH
Sbjct: 269 LDKVAEEIGWDNYKVVQTVKGADMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DDF + +P+ + + G Y+ D P L+G+ K + L + L
Sbjct: 326 APGFGEDDFNVGQKYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMIQKLKDAGALL 384
Query: 360 T-ENYQHSYPYDWRTKKPVILKASQQWF 386
+ + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWF 412
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF + + L ++ F+P K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASISPFRDQILDQIDKAEFIPSWGKTRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G + W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSNAWYTHTAKELL 503
>gi|229546850|ref|ZP_04435575.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|257086362|ref|ZP_05580723.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
gi|257089412|ref|ZP_05583773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|307272017|ref|ZP_07553283.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
gi|307289395|ref|ZP_07569349.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
gi|312904565|ref|ZP_07763723.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
gi|422689640|ref|ZP_16747744.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0630]
gi|422703300|ref|ZP_16761122.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1302]
gi|422722956|ref|ZP_16779505.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2137]
gi|422730877|ref|ZP_16787258.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0645]
gi|422739829|ref|ZP_16794995.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2141]
gi|424671135|ref|ZP_18108150.1| isoleucine--tRNA ligase [Enterococcus faecalis 599]
gi|229308015|gb|EEN74002.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|256994392|gb|EEU81694.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
gi|256998224|gb|EEU84744.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|306499650|gb|EFM69013.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
gi|306511312|gb|EFM80316.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
gi|310632078|gb|EFQ15361.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
gi|315026979|gb|EFT38911.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2137]
gi|315144388|gb|EFT88404.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2141]
gi|315162932|gb|EFU06949.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0645]
gi|315165132|gb|EFU09149.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1302]
gi|315577381|gb|EFU89572.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0630]
gi|402359695|gb|EJU94320.1| isoleucine--tRNA ligase [Enterococcus faecalis 599]
Length = 933
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 333/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 281 AVGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|257415622|ref|ZP_05592616.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
gi|257157450|gb|EEU87410.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
Length = 933
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 333/623 (53%), Gaps = 59/623 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGV 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPE-TIEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+ + PI+PH AEE++S L +
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE 781
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 281 AIGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGV-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGV-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|422729994|ref|ZP_16786389.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0012]
gi|315149525|gb|EFT93541.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0012]
Length = 933
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 338/639 (52%), Gaps = 60/639 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
++LAE+E+EYK D S SIY+ + LL+ T +IWTTTPW+LPAN I+ N
Sbjct: 198 SSLAEAEIEYK-DVKSPSIYVAFNVADGKG-LLDNETAF--VIWTTTPWTLPANLGISVN 253
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRD 536
P Y G ++AK L+ +K +++V+ +F G+ L +T HP R
Sbjct: 254 PDFTYVEVKADGRKFVIAKDLLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFY--DRT 311
Query: 537 LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGL 596
++ V+ GTGLVH AP HG+DD++++ +PV++ + ++G ++ D PG EG+
Sbjct: 312 SLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI 370
Query: 597 NILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ L+E +L + + HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 371 -FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E+V+++ K L + I R W ISRQR WGVP+P+FY +G+ II E I+H
Sbjct: 430 DEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPET-IEHV 488
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ ++LL + N TK DI+D+WFDSG S VL+++
Sbjct: 489 ANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHEGVLRERE 548
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA +Y+EG DQ GWF SS+ TSVA+ AP++++ G V+D +G KMSKS+GN
Sbjct: 549 ELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIISQGMVLDGEGRKMSKSLGNT 608
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPI 882
I LP EK + + G D+LR WV++ + V +
Sbjct: 609 I-----------LP--EKVINQM----------------GADILRLWVSS-VDAEADVRV 638
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE-FQNTM 937
+ILN + +KIR+++R+LL + + + +++ R VD YM RL + Q
Sbjct: 639 SMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIR 698
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y ++ + R ++NF+ +LS+FY KD +Y ++ N R + L
Sbjct: 699 ENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSL 758
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYS 1036
+ + PI+PH AEE++S L + + F Y ++
Sbjct: 759 TKLLTPIIPHTAEEIWSFLQEEE-EYVQLAEFPGYETFT 796
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 236/393 (60%), Gaps = 15/393 (3%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG H+GH++NKI KDI +RS + G R YVPGWD HG
Sbjct: 46 QRQKLNEGKPTFVLHDGPPYANGNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHG 105
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K K ++ + R+K K +AL ++ Q+ +F+ GV DWEH Y T D
Sbjct: 106 LPIEQVLTNKGVKRKEMTVAEYREKCKEYALSQVDKQRNDFKRLGVSGDWEH-PYITLDP 164
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
EY ++ F + ++ YIY+ LKP+YWSPSS ++LAE+E+EYK D S SIY+ +
Sbjct: 165 EYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEIEYK-DVKSPSIYVAFNVAD 223
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKW 247
LL+ T +IWTTTPW+LPAN I+ NP Y G ++AK L+ ++K
Sbjct: 224 GKG-LLDNETAF--VIWTTTPWTLPANLGISVNPDFTYVEVKADGRKFVIAKDLLATVKE 280
Query: 248 TFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQD 306
++EV+ +F G+ L +T HP R ++ V+ GTGLVH AP HG+D
Sbjct: 281 AVGWEEVEVLREFSGEKLDRMTAQHPFY--DRTSLVMLGDHVTLDAGTGLVHTAPGHGED 338
Query: 307 DFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTENYQ 364
D++++ +PV++ + ++G ++ D PG EG+ + L+E +L + +
Sbjct: 339 DYIVSRKYDLPVISPVDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFT 396
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF + + + L
Sbjct: 397 HSYPHDWRTKKPVIYRATPQWFASISKFRQDIL 429
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVIL 1166
+ ++G ++ D PG EG+ + + L+E +L + + HSYP+DWRTKKPVI
Sbjct: 354 VDSRGVFT-DEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIY 411
Query: 1167 KASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVF 1226
+A+ QWF + + + L +E V+++ K L + I R W ISRQR WGVP+P+F
Sbjct: 412 RATPQWFASISKFRQDILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIF 471
Query: 1227 Y--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
Y +G+ II E I+H L EHG + W+ ++LL
Sbjct: 472 YAENGEAIITPE-TIEHVANLFAEHGSNIWFMREAKELL 509
>gi|317495329|ref|ZP_07953699.1| isoleucyl-tRNA synthetase [Gemella morbillorum M424]
gi|316914751|gb|EFV36227.1| isoleucyl-tRNA synthetase [Gemella morbillorum M424]
Length = 910
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 225/624 (36%), Positives = 324/624 (51%), Gaps = 65/624 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ DH S SIY+ L + +G +IWTTTPW+LPAN IA +
Sbjct: 192 SALAEAEIEYR-DHTSPSIYVAFDLVSEDGVVEKGT---KFVIWTTTPWTLPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P EY V G N ++AK L E W + V+ G+ L+ + HP
Sbjct: 248 PDFEYQVVKYNGENYLLAKERVNFLAEQFGWENYEEGKVIF---GKELEYLLCQHPF--L 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE-KIPVLNLITNQGKYSPDAGPG 592
R L+ A +V+ GTGLVH AP HG DD+L+ + K+ VL+ + NQG + +AG
Sbjct: 303 DRTSTLILADYVTLDSGTGLVHTAPGHGVDDYLVGQGKYKLGVLSPVDNQGVLTEEAGQ- 361
Query: 593 LEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
G + KD + +L E L EN HSYP+DWR+KKP+I +++ QWF + +
Sbjct: 362 FAGKFVFDANKDIIAYLAETGALLKQENITHSYPHDWRSKKPIIFRSTPQWFCSVDAFRS 421
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
E L ++ F E K L + I R W ISRQRVWGVPIPVFY +G+ I+ NE I
Sbjct: 422 ELLEAVDNTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIPVFYAENGEAILDNEL-I 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH--V 762
+H + + G + W+ ++LL + N TK DI+D+WFDSG S
Sbjct: 481 EHVAKIFEVEGSNVWFYKEAKELLPEGYTHPGSPNGEFTKEMDIMDVWFDSGTSHQGCCA 540
Query: 763 LKDK---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++D PA +Y+EG DQ GWF SSL+TSVA+ AP++ + GFV+D G KMSKS+
Sbjct: 541 VRDDLTYPADLYLEGSDQYRGWFNSSLITSVAVSGVAPYKELVSAGFVMDGNGNKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVIS +D+ K+L G +++R W +A
Sbjct: 601 GNVISPNDV---GKQL--------------------------GAEIIRLW-SASVDYTQD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS-ESTGSISRYVDV-----YMLKRLCEF 933
V I +IL + +KIR++ R+LLG L N S ++ + Y D+ YM+ + +
Sbjct: 631 VRISNDILKQVSETYRKIRNTYRFLLGNLFNGSFDNRKDLVEYADLEELDKYMMIKFEKV 690
Query: 934 QNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNI 993
+ Y +Q+ + L NF ELS+FY KD LY + + R S L L+ I
Sbjct: 691 VANVLDYYENYQFNSITSELTNFFNVELSSFYLDYGKDILYIEGEDSPKRRSMLTVLYTI 750
Query: 994 FHVLLRTVAPIMPHLAEEVYSHLP 1017
+R API+ AEE+Y ++P
Sbjct: 751 LSKSVRLFAPILSFTAEEIYDNMP 774
Score = 286 bits (733), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 231/400 (57%), Gaps = 19/400 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY E GKP ++LHDGPPYANG HIGHA+NKILKD ++ + G +YVPGW
Sbjct: 36 DLYRKVLEKNAGKPTYVLHDGPPYANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGW 95
Query: 66 DCHGLPIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE + + K + R K K++AL+ ++ Q+ +F+ GV+ DW+ N Y
Sbjct: 96 DTHGLPIEQVLVNNGVDRKSMPATKFRNKCKDYALKQVDKQREDFKKLGVIGDWD-NPYL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T D ++ Q+ F + + YIY+ LKP+YWSPSS +ALAE+E+EY+ DH S SIY+
Sbjct: 155 TLDPKFEAEQIRVFGKMVDKGYIYKGLKPIYWSPSSESALAEAEIEYR-DHTSPSIYVAF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAK---- 239
L + +G +IWTTTPW+LPAN IA +P EY V G N ++AK
Sbjct: 214 DLVSEDGVVEKGT---KFVIWTTTPWTLPANLGIAVHPDFEYQVVKYNGENYLLAKERVN 270
Query: 240 CLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L E W + +V+ G+ L+ + HP R L+ A +V+ GTGLVH
Sbjct: 271 FLAEQFGWENYEEGKVIF---GKELEYLLCQHPF--LDRTSTLILADYVTLDSGTGLVHT 325
Query: 300 APAHGQDDFLLALAE-KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVL 358
AP HG DD+L+ + K+ VL+ + NQG + +AG G + KD + +L E L
Sbjct: 326 APGHGVDDYLVGQGKYKLGVLSPVDNQGVLTEEAGQ-FAGKFVFDANKDIIAYLAETGAL 384
Query: 359 WT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
EN HSYP+DWR+KKP+I +++ QWF + + E L
Sbjct: 385 LKQENITHSYPHDWRSKKPIIFRSTPQWFCSVDAFRSELL 424
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPV 1164
L+ + NQG + +AG G + KD + +L E L EN HSYP+DWR+KKP+
Sbjct: 346 LSPVDNQGVLTEEAGQ-FAGKFVFDANKDIIAYLAETGALLKQENITHSYPHDWRSKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +++ QWF + + E L ++ F E K L + I R W ISRQRVWGVPIP
Sbjct: 405 IFRSTPQWFCSVDAFRSELLEAVDNTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY +G+ I+ NE I+H + + G + W+ ++LL
Sbjct: 465 VFYAENGEAILDNEL-IEHVAKIFEVEGSNVWFYKEAKELL 504
>gi|339634152|ref|YP_004725793.1| isoleucyl-tRNA synthetase [Weissella koreensis KACC 15510]
gi|338853948|gb|AEJ23114.1| isoleucyl-tRNA synthetase [Weissella koreensis KACC 15510]
Length = 931
Score = 342 bits (878), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 211/627 (33%), Positives = 322/627 (51%), Gaps = 56/627 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALA SE+EY D S + Y ++ L D + ++WTTTPW++P ++ I+ N
Sbjct: 191 SALALSEIEYH-DVTSPTAYYAEQVKDGKGLL---DNDTYFVVWTTTPWTIPGSRGISLN 246
Query: 478 PALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
+YS G++ +I + L + + +D +V+ +F G+ L+ IT HP +
Sbjct: 247 AEFKYSQVKPSGSDKKYIIATELLAHDAEIFGWSDYEVLAEFTGKDLEYITAQHPFYDDV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
L +L A FV+ GTGLVH AP G+DDF + + + + QGK + +AG
Sbjct: 307 ELLVML-ADFVTLDAGTGLVHTAPGFGEDDFYVGQKYNLEIAVPVDYQGKMTEEAGVDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ + L + VL E+ HSYP+DWRTKKPVI +A QWF + +
Sbjct: 366 GVFYEDANAISLKKLSDQGVLLKQEDITHSYPFDWRTKKPVIYRAVPQWFASVADFRDDL 425
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L+ L+ V F P KK L + + R W ISRQRVWGVP+P+FY D T I++ I+H
Sbjct: 426 LSELDNVTFSPAWGKKRLYNMLKDRGDWVISRQRVWGVPLPIFYAEDGTAILDPDVIEHV 485
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L++E+G +W+ ++LL N N TK NDI+D+WFDSG S VL +
Sbjct: 486 AKLVEENGSTYWFEKEPKELLPEGYTNEHSPNGQFTKENDIMDVWFDSGTSHQGVLATRD 545
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA + +EG DQ GWF SS++TSVA AP+++V GF +D G KMSKS+GN
Sbjct: 546 NLEFPADLVLEGSDQYRGWFNSSIITSVAATGHAPYKSVLSQGFTLDANGEKMSKSIGNT 605
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTVP 881
I ++IT + G D++R WV+ S+D V
Sbjct: 606 IEPNEITD-----------------------------SMGADIIRLWVSTVDTSQD--VR 634
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
+ + + D +KIR+++R+LL + ++ VD Y R + +
Sbjct: 635 VTMDGFKQTSDSYRKIRNTMRFLLANTSDFDSQKDQVAFADMTPVDQYFYARFNDLVAEL 694
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y + + ++ L+NF+ +LSAFY KD LY ++ NG R S L+ I L
Sbjct: 695 KSAYDRYDFQAVNKSLMNFINVDLSAFYLDFNKDVLYVEAPNGILRRSVQTVLYKILVSL 754
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFS 1024
+ + PI+PH AEE++ +LP+ G F+
Sbjct: 755 NKLMLPILPHTAEEIFEYLPNETGEFA 781
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 217/393 (55%), Gaps = 13/393 (3%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP FILHDGPPYANG HIGHA+NKI KDI +R + G R ++PGWD HGL
Sbjct: 40 RQKLNEGKPTFILHDGPPYANGNIHIGHAMNKISKDIIVRYKSMNGFRSPFIPGWDTHGL 99
Query: 71 PIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE L + K + P+ RK A FA + + Q +F+ G+ ADW+ Y T E
Sbjct: 100 PIEQQLTKMGKDRKAVGPVIWRKMADEFAHKQVKKQMNDFKRLGIAADWDQ-PYLTLMPE 158
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ QL F ++ K+ YIY+ KPV+WS SS +ALA SE+EY D S + Y ++
Sbjct: 159 FEAAQLRVFGDMAKKGYIYKGKKPVFWSWSSESALALSEIEYH-DVTSPTAYYAEQVKDG 217
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCLVESL 245
L D + ++WTTTPW++P ++ I+ N +YS G++ +I + L
Sbjct: 218 KGLL---DNDTYFVVWTTTPWTIPGSRGISLNAEFKYSQVKPSGSDKKYIIATELLAHDA 274
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
+ +D EV+ +F G+ L+ IT HP + L +L A FV+ GTGLVH AP G+
Sbjct: 275 EIFGWSDYEVLAEFTGKDLEYITAQHPFYDDVELLVML-ADFVTLDAGTGLVHTAPGFGE 333
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-ENYQ 364
DDF + + + + QGK + +AG G+ + L + VL E+
Sbjct: 334 DDFYVGQKYNLEIAVPVDYQGKMTEEAGVDFAGVFYEDANAISLKKLSDQGVLLKQEDIT 393
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A QWF + + L
Sbjct: 394 HSYPFDWRTKKPVIYRAVPQWFASVADFRDDLL 426
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 7/172 (4%)
Query: 1112 QGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQ 1170
QGK + +AG G+ + L + VL E+ HSYP+DWRTKKPVI +A
Sbjct: 353 QGKMTEEAGVDFAGVFYEDANAISLKKLSDQGVLLKQEDITHSYPFDWRTKKPVIYRAVP 412
Query: 1171 QWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 1230
QWF + + L+ L+ V F P KK L + + R W ISRQRVWGVP+P+FY D
Sbjct: 413 QWFASVADFRDDLLSELDNVTFSPAWGKKRLYNMLKDRGDWVISRQRVWGVPLPIFYAED 472
Query: 1231 -TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL-----NTSDVNSNVTKSN 1276
T I++ I+H L++E+G +W+ ++LL N N TK N
Sbjct: 473 GTAILDPDVIEHVAKLVEENGSTYWFEKEPKELLPEGYTNEHSPNGQFTKEN 524
>gi|422846176|ref|ZP_16892859.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK72]
gi|325688227|gb|EGD30246.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK72]
Length = 930
Score = 342 bits (878), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 207/636 (32%), Positives = 323/636 (50%), Gaps = 54/636 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L +D + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DSDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y + G + IVA L+ +L F D+ V+ + GQ L I HP +K
Sbjct: 247 ADIDYVLVQPAGESRKFIVASELLNSLSEKFGWADVQVLATYRGQELNHIVTEHPWDKAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNSVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADIYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIRFNQLVETIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDIVYIEAAKSLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQY 1035
+ PI+PH AEE++S+L + F L +
Sbjct: 755 LLTPILPHTAEEIWSYLEHEEEEFVQLSELPEALTF 790
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DW+ N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWD-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L +D + ++WTTTP+++ A++ + ++Y + G + IVA
Sbjct: 212 NRVKDGKGVL---DSDTYIVVWTTTPFTITASRGLTVGADIDYVLVQPAGESRKFIVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I HP +K +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWADVQVLATYRGQELNHIVTEHPWDKAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|325956509|ref|YP_004291921.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
gi|385817399|ref|YP_005853789.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL1118]
gi|325333074|gb|ADZ06982.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
gi|327183337|gb|AEA31784.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL1118]
Length = 927
Score = 342 bits (878), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 214/618 (34%), Positives = 321/618 (51%), Gaps = 57/618 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ LAE+E+EYK D + SI++ + + D + +IWTTTPW++PAN+ I N
Sbjct: 191 STLAEAEVEYK-DVEANSIFVAFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVN 247
Query: 478 PALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQRD 536
P +YSV V +VA L++ + D VV G ++ + HPI ++
Sbjct: 248 PKFDYSVVQVGDKRYVVASGLLDKVAEEIGWDNYKVVQTVKGADMEYMKAKHPIYDKE-- 305
Query: 537 LKLLPAGF-VSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
L+ GF V+ GTGLVH AP G+DDF + +P+ + + G Y+ D P L+G
Sbjct: 306 -SLVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQKYNLPIFSPVDAHGCYT-DEVPELKG 363
Query: 596 LNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
+ K + L + L + + HSYP+DWRTKKPVI +A+ QWF + + L
Sbjct: 364 MFYQDVDKLMIQKLKDAGALLKLKVFTHSYPHDWRTKKPVIFRATTQWFASISPFRDQIL 423
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+++ F+P K L + I R W ISRQR WGVP+P+FY D T IV I+H
Sbjct: 424 DQIDKAEFIPSWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIA 483
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
+ ++ G + W++ + ++LL + N TK DILD+WFDSG SWS V++ +
Sbjct: 484 KIFEKEGSNAWYTHTAKELLPDGFTSEHSPNGEFTKEKDILDVWFDSGSSWSGVMEKRDG 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA+ AP++ V GFV+D+KG KMSKS+GNVI
Sbjct: 544 LHFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVI 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVA-AHASKDPTVPI 882
S +D+ + G +++R WVA A + D V +
Sbjct: 604 -----------------------SPNDV------IKRMGAEIIRLWVAQADTTSDVAVSM 634
Query: 883 GKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMD 938
G IL S + +KIR++ RY+L + +S R VD YM +L +
Sbjct: 635 G--ILQQSAEGYRKIRNTFRYMLANTSDFDPKENRVSYDDLRSVDQYMEVKLNDLVKDCL 692
Query: 939 TLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLL 998
Y +F + + + NF+ N+LSAFY KD LY + + AR S +++ L
Sbjct: 693 AAYDKFDFTTVFKKVFNFISNDLSAFYLDFAKDVLYIEDQDSHARRSMQTVIYDAAVKLD 752
Query: 999 RTVAPIMPHLAEEVYSHL 1016
+ + PI+PH EE++ L
Sbjct: 753 KILTPILPHTMEEIWGFL 770
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 217/388 (55%), Gaps = 15/388 (3%)
Query: 5 SELYSWQREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY QR LN G P F LHDGPP+ANG H+GHA+NKI KDI +R + G YVP
Sbjct: 34 NDLYE-QRLKLNEGHPRFDLHDGPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVP 92
Query: 64 GWDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
GWD HGLP+E L K + R+ + +A E I Q +F+ GV+ADW+H
Sbjct: 93 GWDTHGLPVEQQLAKKGVDRKTMDRAKYRELCRQYAEEQIQKQMTDFKRLGVMADWDH-P 151
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T ++ ++ F +YK+ YIY+ KPVYWS SS + LAE+E+EYK D + SI++
Sbjct: 152 YITLQHDFEAQEIRVFGEMYKKGYIYKGKKPVYWSWSSESTLAEAEVEYK-DVEANSIFV 210
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ + D + +IWTTTPW++PAN+ I NP +YSV V +VA L
Sbjct: 211 AFPVTDGKGII--DPKDTYFVIWTTTPWTIPANEAICVNPKFDYSVVQVGDKRYVVASGL 268
Query: 242 VESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGF-VSSSKGTGLVHC 299
++ + D +VV G ++ + HPI ++ L+ GF V+ GTGLVH
Sbjct: 269 LDKVAEEIGWDNYKVVQTVKGADMEYMKAKHPIYDKE---SLVIEGFHVTLDDGTGLVHT 325
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DDF + +P+ + + G Y+ D P L+G+ K + L + L
Sbjct: 326 APGFGEDDFNVGQKYNLPIFSPVDAHGCYT-DEVPELKGMFYQDVDKLMIQKLKDAGALL 384
Query: 360 T-ENYQHSYPYDWRTKKPVILKASQQWF 386
+ + HSYP+DWRTKKPVI +A+ QWF
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWF 412
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 1150 YQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRP 1209
+ HSYP+DWRTKKPVI +A+ QWF + + L ++ F+P K L + I R
Sbjct: 389 FTHSYPHDWRTKKPVIFRATTQWFASISPFRDQILDQIDKAEFIPSWGKTRLYNMIKDRG 448
Query: 1210 YWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
W ISRQR WGVP+P+FY D T IV I+H + ++ G + W++ ++LL
Sbjct: 449 DWVISRQRAWGVPLPIFYAEDGTPIVTPETIEHIAKIFEKEGSNAWYTHTAKELL 503
>gi|420161633|ref|ZP_14668397.1| isoleucyl-tRNA synthetase [Weissella koreensis KCTC 3621]
gi|420161739|ref|ZP_14668501.1| isoleucyl-tRNA synthetase [Weissella koreensis KCTC 3621]
gi|394744746|gb|EJF33665.1| isoleucyl-tRNA synthetase [Weissella koreensis KCTC 3621]
gi|394745171|gb|EJF34067.1| isoleucyl-tRNA synthetase [Weissella koreensis KCTC 3621]
Length = 931
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 211/627 (33%), Positives = 322/627 (51%), Gaps = 56/627 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALA SE+EY D S + Y ++ L D + ++WTTTPW++P ++ I+ N
Sbjct: 191 SALALSEIEYH-DVTSPTAYYAEQVKDGKGLL---DNDTYFVVWTTTPWTIPGSRGISLN 246
Query: 478 PALEYSVASVKGAN---VIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQ 534
+YS G++ +I + L + + +D +V+ +F G+ L+ IT HP +
Sbjct: 247 AEFKYSQVKPSGSDKKYIIATELLAHDAEIFGWSDYEVLAEFTGKDLEYITAQHPFYDDV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
L +L A FV+ GTGLVH AP G+DDF + + + + QGK + +AG
Sbjct: 307 ELLVML-ADFVTLDAGTGLVHTAPGFGEDDFYVGQKYNLEIAVPVDYQGKMTEEAGVDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ + L + VL E+ HSYP+DWRTKKPVI +A QWF + +
Sbjct: 366 GVFYEDANAISLKKLSDQGVLLKQEDITHSYPFDWRTKKPVIYRAVPQWFASVADFRDDL 425
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHF 712
L+ L+ V F P KK L + + R W ISRQRVWGVP+P+FY D T I++ I+H
Sbjct: 426 LSELDNVTFSPAWGKKRLYNMLKDRGDWVISRQRVWGVPLPIFYAEDGTAILDPDIIEHV 485
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L++E+G +W+ ++LL N N TK NDI+D+WFDSG S VL +
Sbjct: 486 AKLVEENGSTYWFEKEPKELLPEGYTNEHSPNGQFTKENDIMDVWFDSGTSHQGVLATRD 545
Query: 767 ----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNV 822
PA + +EG DQ GWF SS++TSVA AP+++V GF +D G KMSKS+GN
Sbjct: 546 NLEFPADLVLEGSDQYRGWFNSSIITSVAATGHAPYKSVLSQGFTLDANGEKMSKSIGNT 605
Query: 823 ISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTVP 881
I ++IT + G D++R WV+ S+D V
Sbjct: 606 IEPNEITD-----------------------------SMGADIIRLWVSTVDTSQD--VR 634
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
+ + + D +KIR+++R+LL + ++ VD Y R + +
Sbjct: 635 VTMDGFKQTSDSYRKIRNTMRFLLANTSDFDSQKDQVAFADMTPVDQYFYARFNDLVAEL 694
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
+ Y + + ++ L+NF+ +LSAFY KD LY ++ NG R S L+ I L
Sbjct: 695 KSAYDRYDFQAVNKSLMNFINVDLSAFYLDFNKDVLYVEAPNGILRRSVQTVLYKILVSL 754
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTFS 1024
+ + PI+PH AEE++ +LP+ G F+
Sbjct: 755 NKLMLPILPHTAEEIFEYLPNETGEFA 781
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 155/393 (39%), Positives = 218/393 (55%), Gaps = 13/393 (3%)
Query: 12 REALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGL 70
R+ LN GKP FILHDGPPYANG HIGHA+NKI KDI +R + G R ++PGWD HGL
Sbjct: 40 RQKLNEGKPTFILHDGPPYANGNIHIGHAMNKISKDIIVRYKSMNGFRSPFIPGWDTHGL 99
Query: 71 PIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKE 128
PIE L + K + P+ RK A FA + + Q +F+ G+ ADW+H Y T E
Sbjct: 100 PIEQQLTKMGKDRKAVGPVIWRKMADEFAHKQVKKQMNDFKRLGIAADWDH-PYLTLMPE 158
Query: 129 YVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQV 188
+ QL F ++ K+ YIY+ KPV+WS SS +ALA SE+EY D S + Y ++
Sbjct: 159 FEAAQLRVFGDMAKKGYIYKGKKPVFWSWSSESALALSEIEYH-DVTSPTAYYAEQVKDG 217
Query: 189 PAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN---VIVAKCLVESL 245
L D + ++WTTTPW++P ++ I+ N +YS G++ +I + L
Sbjct: 218 KGLL---DNDTYFVVWTTTPWTIPGSRGISLNAEFKYSQVKPSGSDKKYIIATELLAHDA 274
Query: 246 KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 305
+ +D EV+ +F G+ L+ IT HP + L +L A FV+ GTGLVH AP G+
Sbjct: 275 EIFGWSDYEVLAEFTGKDLEYITAQHPFYDDVELLVML-ADFVTLDAGTGLVHTAPGFGE 333
Query: 306 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT-ENYQ 364
DDF + + + + QGK + +AG G+ + L + VL E+
Sbjct: 334 DDFYVGQKYNLEIAVPVDYQGKMTEEAGVDFAGVFYEDANAISLKKLSDQGVLLKQEDIT 393
Query: 365 HSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A QWF + + L
Sbjct: 394 HSYPFDWRTKKPVIYRAVPQWFASVADFRDDLL 426
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 7/172 (4%)
Query: 1112 QGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQ 1170
QGK + +AG G+ + L + VL E+ HSYP+DWRTKKPVI +A
Sbjct: 353 QGKMTEEAGVDFAGVFYEDANAISLKKLSDQGVLLKQEDITHSYPFDWRTKKPVIYRAVP 412
Query: 1171 QWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYDGD 1230
QWF + + L+ L+ V F P KK L + + R W ISRQRVWGVP+P+FY D
Sbjct: 413 QWFASVADFRDDLLSELDNVTFSPAWGKKRLYNMLKDRGDWVISRQRVWGVPLPIFYAED 472
Query: 1231 -TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL-----NTSDVNSNVTKSN 1276
T I++ I+H L++E+G +W+ ++LL N N TK N
Sbjct: 473 GTAILDPDIIEHVAKLVEENGSTYWFEKEPKELLPEGYTNEHSPNGQFTKEN 524
>gi|335429595|ref|ZP_08556493.1| isoleucyl-tRNA synthetase [Haloplasma contractile SSD-17B]
gi|334889605|gb|EGM27890.1| isoleucyl-tRNA synthetase [Haloplasma contractile SSD-17B]
Length = 912
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 319/621 (51%), Gaps = 58/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAH-LLEGATDLHALIWTTTPWSLPANQFIAF 476
TALAE+E+EY H KS + + N + +L+G D +IWTTTPW++PAN I
Sbjct: 194 TALAEAEIEY---HDKKSPAIYVAFNVMDGKGVLDG--DEQFIIWTTTPWTIPANLAICL 248
Query: 477 NPALEYSVASVKGANVIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQR 535
+P LEYSV V G IVA LVE+L F+ ++ + + G L+ + HP+
Sbjct: 249 HPELEYSVVLVDGNKYIVASDLVESLTEEFEWSNPKTIKTYQGAELEHVKTKHPLYDR-- 306
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L+ G ++ TG VH AP HG+DDF + + L + ++G + +A PG EG
Sbjct: 307 -VSLITLGEHVTADATGCVHTAPGHGEDDFNIGKQYGLEPLCPVDDRGIMTKEA-PGFEG 364
Query: 596 LNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
L+I K L L ++ HSYP+DWRTKKP+I + + QW+ + +K +
Sbjct: 365 LHIDKANKAITEKLEATGALIKLSFINHSYPHDWRTKKPIIFRVTPQWYASIDGLKDTMM 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHF 712
+E V ++P L + I R WCISRQRVWGVPIPVFY +G+ I+ + I H
Sbjct: 425 KEIESVKWLPSWGDVRLGNMIKDRTDWCISRQRVWGVPIPVFYAENGEEILDKDV-IDHV 483
Query: 713 CTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK- 766
L EHG + W+ S E+LL + N+ K DI+D+WFDSG S VL+++
Sbjct: 484 SELFKEHGSNIWFDWSAEKLLPEGFTHAGSPNNKFRKETDIMDVWFDSGTSHQGVLEERG 543
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL T VA+ +P++ V HGFV+D G KMSKS+GNV+
Sbjct: 544 LPYPADLYLEGSDQYRGWFNSSLSTGVAMTGKSPYKQVVSHGFVLDANGRKMSKSLGNVV 603
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
I + G D+LR WV++ V I
Sbjct: 604 DPLKI-----------------------------MKQLGADILRLWVSS-VDYQADVRIS 633
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
N++ + +K R++ R+LLG LH+ + + VD Y+ +L + +
Sbjct: 634 DNMMKQIAESYRKFRNTFRFLLGNLHDFDPKSDYVDYEKRNEVDQYVTCKLNDLVKEVLH 693
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y F++ R + N+V LS+FY KD LY + N R S L++ L R
Sbjct: 694 AYENFEFDVVYRKMTNYVTQFLSSFYLDFTKDILYIEKDNSLDRRSIQSVLYDNIDRLSR 753
Query: 1000 TVAPIMPHLAEEVYSHLPSRQ 1020
+API+ H +EVY ++P ++
Sbjct: 754 LLAPILSHTTDEVYQYIPGKK 774
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 228/394 (57%), Gaps = 16/394 (4%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY E N KP +ILHDGPPYANG H+GHA+NK+LKD +R + G + Y+PGW
Sbjct: 37 DLYHKIIEKNNDKPTYILHDGPPYANGNIHMGHALNKVLKDFVVRFKNMSGFKSPYIPGW 96
Query: 66 DCHGLPIELKAITSKDKL----LSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNC 121
D HGLPIE A+T K K+ LSP + R+K +ALE + QK +F+ GV+ +WE
Sbjct: 97 DTHGLPIE-TALTKKKKVKRKELSPSEFREKCAEYALEQVENQKEQFKRLGVMGEWEQ-P 154
Query: 122 YHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL 181
Y T K Y QL F + ++ IY+ L+PVYWS SS TALAE+E+EY D S +IY+
Sbjct: 155 YITLQKNYEARQLKLFAKMVEKGLIYKGLRPVYWSWSSETALAEAEIEYH-DKKSPAIYV 213
Query: 182 KIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL 241
+ +L+G D +IWTTTPW++PAN I +P LEYSV V G IVA L
Sbjct: 214 AFNVMDGKG-VLDG--DEQFIIWTTTPWTIPANLAICLHPELEYSVVLVDGNKYIVASDL 270
Query: 242 VESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCA 300
VESL F+ ++ + + + G L+ + HP+ + L+ G ++ TG VH A
Sbjct: 271 VESLTEEFEWSNPKTIKTYQGAELEHVKTKHPLYDR---VSLITLGEHVTADATGCVHTA 327
Query: 301 PAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT 360
P HG+DDF + + L + ++G + +A PG EGL+I K L L
Sbjct: 328 PGHGEDDFNIGKQYGLEPLCPVDDRGIMTKEA-PGFEGLHIDKANKAITEKLEATGALIK 386
Query: 361 ENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 393
++ HSYP+DWRTKKP+I + + QW+ + +K
Sbjct: 387 LSFINHSYPHDWRTKKPIIFRVTPQWYASIDGLK 420
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILK 1167
+ ++G + +A PG EGL+I K L L ++ HSYP+DWRTKKP+I +
Sbjct: 349 VDDRGIMTKEA-PGFEGLHIDKANKAITEKLEATGALIKLSFINHSYPHDWRTKKPIIFR 407
Query: 1168 ASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY 1227
+ QW+ + +K + +E V ++P L + I R WCISRQRVWGVPIPVFY
Sbjct: 408 VTPQWYASIDGLKDTMMKEIESVKWLPSWGDVRLGNMIKDRTDWCISRQRVWGVPIPVFY 467
Query: 1228 --DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+G+ I+ + I H L EHG + W+ E+LL
Sbjct: 468 AENGEEILDKDV-IDHVSELFKEHGSNIWFDWSAEKLL 504
>gi|300173565|ref|YP_003772731.1| isoleucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
gi|299887944|emb|CBL91912.1| Isoleucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
Length = 930
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 220/632 (34%), Positives = 331/632 (52%), Gaps = 66/632 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y NQV +D + ++WTTTP+++ A++ I
Sbjct: 191 SALAEAEIEYH-DINSTSLYYA---NQVKDGRGILDSDTYFVVWTTTPFTVTASRGITLG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQ 534
P ++YSV G +VA +E + F D + + G+ L IT HP + +
Sbjct: 247 PDMDYSVIQPAGETRKFVVATGRLEVIAPLFGWDKYKTLATYKGEELDRITAYHPWDLDA 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L ++ A V+ GTGLVH AP G+DDF + + V+ + +G + +AGP E
Sbjct: 307 EEL-VMNADHVTLDSGTGLVHTAPGFGEDDFNVGKQYGLEVVVTVDEKGYMTKNAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDV------LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
G D V+ LV + L E HSYP+DWRTKKP+I +A QWF +
Sbjct: 366 G-----KFYDDVVGLVINKLTTANLFLAKEKITHSYPFDWRTKKPIIWRAVPQWFASVGK 420
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEA 707
+ L L+ VNF PE KK L + I R W ISRQRVWGVP+P+FY D T I+++
Sbjct: 421 FRQNILDELDHVNFFPEWGKKRLYNMIRDRGDWVISRQRVWGVPLPIFYAEDKTPILDQT 480
Query: 708 NIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHV 762
I H L + HG ++W+ + LL N + TK DI+D+WFDSG SWS V
Sbjct: 481 IINHVADLFEAHGSNYWFEHEAKDLLPEGYTNAHSPHGQFTKEEDIMDVWFDSGSSWSGV 540
Query: 763 LK-----DKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSK 817
+ D PA +Y+EG DQ GWF SSL+TSVA+ AP++NV GF +D KG KMSK
Sbjct: 541 MNTRDQLDYPADLYLEGSDQYRGWFNSSLITSVAVTGHAPYKNVLSQGFTLDGKGNKMSK 600
Query: 818 SVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWW-VAAHASK 876
S+GN IS D+ A K+ G+++LR W ++ S+
Sbjct: 601 SLGNTISPLDV--------------------------ADKM---GIEILRLWTISVDTSQ 631
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRYV----DVYMLKRLCE 932
D +P+ +IL + +K+R++LR+L+ + + +T +I+ D Y L
Sbjct: 632 D--MPVSNDILKQVSESYRKLRNTLRFLMANTADFNYTTDAITFTDRAGHDQYFSVVLNN 689
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
F + Y +Q+ + ++NFV +LSAFY + KD +Y ++ +G AR S +
Sbjct: 690 FIKNVRDSYDNYQFNDIFKRVINFVNVDLSAFYLDIAKDVVYVEAPSGHARRSMQTVFYE 749
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFS 1024
L + + P++PH +EEV+ +LP + F+
Sbjct: 750 TLIALTKLLLPVLPHTSEEVWEYLPHEKLGFA 781
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 221/404 (54%), Gaps = 22/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
S+LY+ + KP F LHDGPPYANG H+GHA+NKI KDI +R + G YVPG
Sbjct: 34 SDLYNQRLSQNENKPHFNLHDGPPYANGNIHLGHALNKISKDIIVRYKNMAGFYAPYVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K + + R AK+FALE ++ QK +F+ G++ADW+ N Y
Sbjct: 94 WDTHGLPIEQQLTKAGHDRKTMPKAEWRNLAKDFALEQVDKQKNDFKRLGIMADWQ-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T E+ QL F + + YI++ KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLQPEFEAAQLRVFGEMASKGYIFKGSKPVYWSWSSESALAEAEIEYH-DINSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
NQV +D + ++WTTTP+++ A++ I P ++YSV G +VA
Sbjct: 212 ---NQVKDGRGILDSDTYFVVWTTTPFTVTASRGITLGPDMDYSVIQPAGETRKFVVATG 268
Query: 241 LVESLKWTFQTD-IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
+E + F D + + + G+ L IT HP + + +L ++ A V+ GTGLVH
Sbjct: 269 RLEVIAPLFGWDKYKTLATYKGEELDRITAYHPWDLDAEEL-VMNADHVTLDSGTGLVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDV-- 357
AP G+DDF + + V+ + +G + +AGP E G D V+ LV +
Sbjct: 328 APGFGEDDFNVGKQYGLEVVVTVDEKGYMTKNAGPDFE-----GKFYDDVVGLVINKLTT 382
Query: 358 ----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L E HSYP+DWRTKKP+I +A QWF + + L
Sbjct: 383 ANLFLAKEKITHSYPFDWRTKKPIIWRAVPQWFASVGKFRQNIL 426
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 12/162 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV------LWTENYQHSYPYDWRTKK 1162
+ +G + +AGP EG + D V+ LV + L E HSYP+DWRTKK
Sbjct: 350 VDEKGYMTKNAGPDFEG-----KFYDDVVGLVINKLTTANLFLAKEKITHSYPFDWRTKK 404
Query: 1163 PVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVP 1222
P+I +A QWF + + L L+ VNF PE KK L + I R W ISRQRVWGVP
Sbjct: 405 PIIWRAVPQWFASVGKFRQNILDELDHVNFFPEWGKKRLYNMIRDRGDWVISRQRVWGVP 464
Query: 1223 IPVFYDGD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+P+FY D T I+++ I H L + HG ++W+ + LL
Sbjct: 465 LPIFYAEDKTPILDQTIINHVADLFEAHGSNYWFEHEAKDLL 506
>gi|450000068|ref|ZP_21824913.1| isoleucyl-tRNA synthetase [Streptococcus mutans N29]
gi|449186312|gb|EMB88151.1| isoleucyl-tRNA synthetase [Streptococcus mutans N29]
Length = 930
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 327/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLPELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHVANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFEDLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ ++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I +++ + PI+PH +EE++S+L + F
Sbjct: 748 ILVNIIKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KDI +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLPELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGDHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVANLFEEHGSVIWWQREAKDLL 504
>gi|381209823|ref|ZP_09916894.1| isoleucyl-tRNA synthetase [Lentibacillus sp. Grbi]
Length = 919
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 214/620 (34%), Positives = 317/620 (51%), Gaps = 60/620 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S SIY+ + +L+G D +IWTTTPW++PAN IA +
Sbjct: 192 SALAEAEIEYH-DKRSPSIYVAFDVTDGKG-VLDG--DEKIIIWTTTPWTIPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVA----KCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
P LEY+V V G ++A + + E L W + +V+ F G+ + HP
Sbjct: 248 PELEYAVVGVNGEKYVIAYELLETMTEELDWE---NPEVIKTFKGEEADKVVAKHPFY-- 302
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
RD ++ V++ GTG VH AP HG+DDF ++ I L+ + QG ++ +A PG
Sbjct: 303 DRDSLVMLGEHVTTDAGTGCVHTAPGHGEDDFYMSREYGIEPLSPVDYQGYFTNEA-PGF 361
Query: 594 EGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPE 652
G K L E L + HSYP+DWRTKKP I +A+ QWF + + +
Sbjct: 362 AGEFYDKANKSITEKLDETGALLKLTFITHSYPHDWRTKKPTIFRATSQWFASIKDFRQD 421
Query: 653 ALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANIKH 711
L + +N+ P + L + + R WCISRQR WGVPIPVFY + T I+N I+H
Sbjct: 422 ILDEINRINWYPSWGETRLYNMVRDREDWCISRQRTWGVPIPVFYAENGTPIINNETIEH 481
Query: 712 FCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL--- 763
L EHG + W+ E+LL + N TK DI+D+WFDSG S VL
Sbjct: 482 VSKLFAEHGSNVWFERGAEELLPEGFTSEHSPNGKFTKETDIMDVWFDSGSSHEAVLMGR 541
Query: 764 --KDKPAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
+PA VY+EG DQ GWF SS+ T+VA+ AP+ + HGF +D G KMSKS+GN
Sbjct: 542 EDHKRPADVYLEGSDQYRGWFNSSISTAVAVTGKAPYEAIVSHGFTLDGNGRKMSKSLGN 601
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
V+ D + K+L G+D+LR WV++ V
Sbjct: 602 VM--------------------------DPLKIKKQL---GIDILRLWVSS-VDYQADVR 631
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQNTM 937
I + IL + +KIR+++R++LG L + + ++ VD YML RL +
Sbjct: 632 ISQEILKQISEAYRKIRNTVRFMLGNLADFDPAKDAVPEAEMEEVDRYMLHRLQNLVKNV 691
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y ++Y+ + NF +LS+FY KD LY ++ + R S + I L
Sbjct: 692 RDNYDIYEYSPIYSQIHNFCAIDLSSFYLDFAKDILYIEAADNHHRRSIQTAYYEIVTTL 751
Query: 998 LRTVAPIMPHLAEEVYSHLP 1017
++ + PI+PH +E++ ++P
Sbjct: 752 VKLLTPIIPHTTDEMWEYIP 771
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/402 (40%), Positives = 225/402 (55%), Gaps = 21/402 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y E G+P FILHDGPPYANG HIGHA+NKILKD R + G YVPG
Sbjct: 34 NRIYEKDLERTKGRPLFILHDGPPYANGDLHIGHALNKILKDFITRYRSMSGYHAPYVPG 93
Query: 65 WDCHGLPIELKAIT----SKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
WD HGLP+E A+T K +S + R++ +A+ ++ Q+ +F+ +GV DW+ N
Sbjct: 94 WDTHGLPVET-ALTKKKKVDRKKMSVAEFRQRCAEYAMGQLDNQRNQFKKFGVRGDWD-N 151
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T K+Y Q+ F + K+ YIYR LKPVYWSPSS +ALAE+E+EY D S SIY
Sbjct: 152 PYITLTKDYEAAQIKVFGEMAKKGYIYRGLKPVYWSPSSESALAEAEIEYH-DKRSPSIY 210
Query: 181 LKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVA-- 238
+ + +L+G D +IWTTTPW++PAN IA +P LEY+V V G ++A
Sbjct: 211 VAFDVTDGKG-VLDG--DEKIIIWTTTPWTIPANLGIAVHPELEYAVVGVNGEKYVIAYE 267
Query: 239 --KCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
+ + E L W + EV+ F G+ + HP RD ++ V++ GTG
Sbjct: 268 LLETMTEELDW---ENPEVIKTFKGEEADKVVAKHPFY--DRDSLVMLGEHVTTDAGTGC 322
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP HG+DDF ++ I L+ + QG ++ +A PG G K L E
Sbjct: 323 VHTAPGHGEDDFYMSREYGIEPLSPVDYQGYFTNEA-PGFAGEFYDKANKSITEKLDETG 381
Query: 357 VLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
L + HSYP+DWRTKKP I +A+ QWF + + + L
Sbjct: 382 ALLKLTFITHSYPHDWRTKKPTIFRATSQWFASIKDFRQDIL 423
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPV 1164
L+ + QG ++ +A PG G K L E L + HSYP+DWRTKKP
Sbjct: 345 LSPVDYQGYFTNEA-PGFAGEFYDKANKSITEKLDETGALLKLTFITHSYPHDWRTKKPT 403
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A+ QWF + + + L + +N+ P + L + + R WCISRQR WGVPIP
Sbjct: 404 IFRATSQWFASIKDFRQDILDEINRINWYPSWGETRLYNMVRDREDWCISRQRTWGVPIP 463
Query: 1225 VFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY + T I+N I+H L EHG + W+ E+LL
Sbjct: 464 VFYAENGTPIINNETIEHVSKLFAEHGSNVWFERGAEELL 503
>gi|420145233|ref|ZP_14652705.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398403139|gb|EJN56408.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 930
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 323/621 (52%), Gaps = 61/621 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+ELEYK D S S Y ++ L TD + ++WTTTPW++PA++ I
Sbjct: 191 SALAEAELEYK-DIESPSAYYGEQVKDGKGIL---DTDTYFVVWTTTPWTIPASEGIVVE 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENL--KWTFQTDIDVVCDFPGQYLQDITYIHPINKE 533
+YSV G + +VA L+ L K +Q D+ V+ GQ ++ +T HP +E
Sbjct: 247 AEYDYSVVQPAGEDRKFVVASELINTLAEKAGWQ-DVKVLKTLKGQDMEYMTAQHPFYQE 305
Query: 534 QRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGL 593
R+L ++ +V+ GTGLVH AP G DDF + + +L+ + +QG+ + D P
Sbjct: 306 -RELLVMLGDYVTLDSGTGLVHTAPGLGDDDFKVGKKYGLDILSPVDDQGRLT-DEAPSF 363
Query: 594 EGLNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKP 651
EGL D + VE +L E Y HSYP DWRTKKPVI +++ QWF + +
Sbjct: 364 EGL-FYEDANKLSIKKVEDAGLMLKQEPYLHSYPMDWRTKKPVIFRSTPQWFASVDAFRD 422
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
+ LA +E+V+F P+ K L + I R W ISRQRVWGVP+P+FY DG+ II E I
Sbjct: 423 QILAAIEKVSFTPDWGKTRLYNMIRDRGDWVISRQRVWGVPLPIFYGEDGEAIITPE-TI 481
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L +HG W+ + LL + N TK DI+D+WFDSG S VL
Sbjct: 482 DHVADLFAKHGSSVWFDREAKDLLPEGFTSEHSPNGQFTKETDIMDVWFDSGSSHQGVLA 541
Query: 765 DK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
++ PA +Y+EG DQ GWF SSL+TSVA+ AP++ + GF +D+ G KMSKS+
Sbjct: 542 ERDYLTYPADLYLEGSDQYRGWFNSSLITSVAVSGEAPYKQILSQGFTMDKDGHKMSKSL 601
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GN I+ +K + G ++LR WVA S
Sbjct: 602 GNTIAP-----------------------------SKIIKQMGAEILRLWVATVDSS-AD 631
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQN 935
V + D +KIR++LR+LL + +T ++ + VD Y++ RL + +
Sbjct: 632 VRVSMEGFKQVSDSYRKIRNTLRFLLANTTDFDPATDALDYSELQSVDKYLMIRLNQVKA 691
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
Y ++ +A + + NF+ +LSAFY KD +Y ++ + R + ++N+
Sbjct: 692 ASLAAYNKYDFATVYKQISNFITVDLSAFYLDFAKDIVYIEAADDPKRRAMQTVMYNVLV 751
Query: 996 VLLRTVAPIMPHLAEEVYSHL 1016
L + + PI+PH EEV+ L
Sbjct: 752 DLTKLLTPILPHTTEEVWGFL 772
Score = 271 bits (694), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 230/398 (57%), Gaps = 18/398 (4%)
Query: 11 QREALN-GKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHG 69
QR+ LN GKP F+LHDGPPYANG HIGHA+NKI KDI +R + G R YVPGWD HG
Sbjct: 39 QRQKLNEGKPTFVLHDGPPYANGNIHIGHALNKISKDIIVRFKSMSGFRAPYVPGWDTHG 98
Query: 70 LPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDK 127
LPIE L K +S + R +ALE ++ Q+ +F+ GV ADW+ Y T
Sbjct: 99 LPIEQQLTKQGYDRKKMSISEFRALCHKYALEQVDKQRTDFKRLGVSADWDR-PYLTLAP 157
Query: 128 EYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQ 187
E+ +++ F + K+ YIYR KP++WSPSS +ALAE+ELEYK D S S Y ++
Sbjct: 158 EFEAHEVRVFGEMAKKGYIYRGNKPIHWSPSSESALAEAELEYK-DIESPSAYYGEQVKD 216
Query: 188 VPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKCLVESL 245
L TD + ++WTTTPW++PA++ I +YSV G + +VA L+ +L
Sbjct: 217 GKGIL---DTDTYFVVWTTTPWTIPASEGIVVEAEYDYSVVQPAGEDRKFVVASELINTL 273
Query: 246 --KWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
K +Q D++V+ GQ ++ +T HP +E R+L ++ +V+ GTGLVH AP
Sbjct: 274 AEKAGWQ-DVKVLKTLKGQDMEYMTAQHPFYQE-RELLVMLGDYVTLDSGTGLVHTAPGL 331
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--VLWTE 361
G DDF + + +L+ + +QG+ + D P EGL D + VE +L E
Sbjct: 332 GDDDFKVGKKYGLDILSPVDDQGRLT-DEAPSFEGL-FYEDANKLSIKKVEDAGLMLKQE 389
Query: 362 NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALVC 399
Y HSYP DWRTKKPVI +++ QWF + + + L
Sbjct: 390 PYLHSYPMDWRTKKPVIFRSTPQWFASVDAFRDQILAA 427
Score = 119 bits (299), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPD-VLWTENYQHSYPYDWRTKKPV 1164
L+ + +QG+ + D P EGL K + + + +L E Y HSYP DWRTKKPV
Sbjct: 347 LSPVDDQGRLT-DEAPSFEGLFYEDANKLSIKKVEDAGLMLKQEPYLHSYPMDWRTKKPV 405
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +++ QWF + + + LA +E V+F P+ K L + I R W ISRQRVWGVP+P
Sbjct: 406 IFRSTPQWFASVDAFRDQILAAIEKVSFTPDWGKTRLYNMIRDRGDWVISRQRVWGVPLP 465
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG+ II E I H L +HG W+ + LL
Sbjct: 466 IFYGEDGEAIITPE-TIDHVADLFAKHGSSVWFDREAKDLL 505
>gi|393219902|gb|EJD05388.1| isoleucyl-tRNA synthetase [Fomitiporia mediterranea MF3/22]
Length = 1027
Score = 342 bits (877), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 217/660 (32%), Positives = 348/660 (52%), Gaps = 90/660 (13%)
Query: 418 TALAESELEYKPDHISKSIYL-------KIKLNQVPAHLLE-GATDLHALIWTTTPWSLP 469
+ALAE+ELEY+ DH+S+S+Y+ + N + A LL+ + ++WTTTPW+L
Sbjct: 215 SALAEAELEYRDDHVSRSVYVLFTLDSSTVSFNPLFAELLQTNRRPIKLMVWTTTPWTLT 274
Query: 470 ANQFIAFNPALEYSVASVK-GANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIH 528
AN IA N L YS+ + G ++IVA+ + L+ D+ G L ++Y+
Sbjct: 275 ANMGIAVNQELRYSILETRSGESIIVAQDRILALQ-AILGDVKESLVVRGTDLVGLSYLP 333
Query: 529 PINKEQRDL---KLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKI-------PVLNL 578
R + K++ A V+S GTGLVHCAPAHG +D+ L A+ + ++
Sbjct: 334 LFPDTPRSIAPFKVISAAHVTSDSGTGLVHCAPAHGAEDYSLFRAQNLLRAQGPGSLICH 393
Query: 579 ITNQGKYS--------PDAGPGLEGLNILGDGKDQVLHLVEPD---VLWTENYQHSYPYD 627
+ ++G+Y+ G L GL++L G + ++ +++ ++ E H YPYD
Sbjct: 394 VDSEGRYNRAIIDAVGETVGQRLLGLDVLMRGTNLIIEMLKEMKGVLMSEERITHRYPYD 453
Query: 628 WRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQR 687
W+T KP+I+ A+ QWF + IK EAL L+ V F P ++ L + R WCISRQR
Sbjct: 454 WKTDKPIIVTATLQWFTSLKSIKEEALDALKNVIFHPAESRNRLESFVRSRSEWCISRQR 513
Query: 688 VWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLL--------NTS 736
VWG PIP + G+ ++ ++ + H +++++ GP +WW V + + + S
Sbjct: 514 VWGAPIPSLHHLPSGEAVLTQDS-LAHILSVLEDKGPGYWWDGPVAEFIPSSMRKNRSVS 572
Query: 737 DVNSNVTKSNDILDIWFDSGISWSHVLKDK---------PAH--VYMEGMDQINGWFMSS 785
+N K +D +D+WFDSG SWS +L++K PA+ V +EG DQ GWF S
Sbjct: 573 SLNREWAKGSDTMDVWFDSGSSWS-LLEEKGFRSASDGAPAYADVCLEGSDQHRGWFQSM 631
Query: 786 LLTSVALK------HTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYE 839
LLT++A P++++ HG V+D+ G KMSKS+GNV+S I +G K
Sbjct: 632 LLTAIAASEKDGYTRILPYKSLVTHGMVLDQAGKKMSKSLGNVMSPMTIIRGGKD----- 686
Query: 840 KSVGNVISAHDITQGAKKLPAYGVDVLRWWVAA-HASKDPTVPIGKNILNSSQDDVQKIR 898
KK PAYG DVLR+WVA+ +D P+G +L + + ++KIR
Sbjct: 687 ---------------KKKEPAYGADVLRYWVASVEFWRD--APLGPTVLAQAVEALRKIR 729
Query: 899 SSLRYLLGV---LHNHSE--STGSISRYV-DVYMLKRLCEFQNTMDTLYGEFQYARASRV 952
++ R++LG L N E G + + D Y+++ L ++++ Y + + R +
Sbjct: 730 NTARFMLGNIGDLGNQGEIMCVGEQNMNIADRYVMRELFHLESSVLNHYKQLNFPRVVQA 789
Query: 953 LLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEV 1012
+ F LSA YF + KD LY ++ R + ++ L+ + L +API PHLAEE+
Sbjct: 790 ISRFANITLSALYFDITKDVLYAHRLDSTERRAVVYVLNQVLERLTLMLAPITPHLAEEI 849
Score = 298 bits (764), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 245/425 (57%), Gaps = 36/425 (8%)
Query: 7 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 66
LY WQ E +P F+ HDGPPYANG H+GHA+NKILKD+ R LLQG+RV+Y+PGWD
Sbjct: 58 LYKWQ-EKFTDRPLFVFHDGPPYANGNLHMGHAMNKILKDMINRFQLLQGRRVNYIPGWD 116
Query: 67 CHGLPIELKAITSKDKLLSPLD---IRKKAKNFALETINTQKAEFESWGVLADW-EHNCY 122
CHGLPIE K + K L IR AK A I QK EF+ G++A+W + Y
Sbjct: 117 CHGLPIEAKTLKELKKEAHDLPAHIIRSAAKTVAEREIEVQKEEFQELGIMANWSKEGTY 176
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYL- 181
T D+ Y QL F + ++ IYR +PV++SPSSR+ALAE+ELEY+ DHVS+S+Y+
Sbjct: 177 RTLDRSYELRQLRMFQKMVEKGLIYRQYRPVHYSPSSRSALAEAELEYRDDHVSRSVYVL 236
Query: 182 ------KIKLNQVPAHLLE-GATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK-GA 233
+ N + A LL+ + ++WTTTPW+L AN IA N L YS+ + G
Sbjct: 237 FTLDSSTVSFNPLFAELLQTNRRPIKLMVWTTTPWTLTANMGIAVNQELRYSILETRSGE 296
Query: 234 NVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDL---KLLPAGFVSS 290
++IVA+ + +L+ D++ G L ++Y+ R + K++ A V+S
Sbjct: 297 SIIVAQDRILALQ-AILGDVKESLVVRGTDLVGLSYLPLFPDTPRSIAPFKVISAAHVTS 355
Query: 291 SKGTGLVHCAPAHGQDDFLLALAEKI-------PVLNLITNQGKYS--------PDAGPG 335
GTGLVHCAPAHG +D+ L A+ + ++ + ++G+Y+ G
Sbjct: 356 DSGTGLVHCAPAHGAEDYSLFRAQNLLRAQGPGSLICHVDSEGRYNRAIIDAVGETVGQR 415
Query: 336 LEGLNILGDGKDQVLHLVEPD---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERI 392
L GL++L G + ++ +++ ++ E H YPYDW+T KP+I+ A+ QWF + I
Sbjct: 416 LLGLDVLMRGTNLIIEMLKEMKGVLMSEERITHRYPYDWKTDKPIIVTATLQWFTSLKSI 475
Query: 393 KPEAL 397
K EAL
Sbjct: 476 KEEAL 480
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 25/202 (12%)
Query: 1091 QGTFSSFCHFKVYHHLNLITNQGKYS--------PDAGPGLEGLNILGEGKDQVLHLVEP 1142
QG S CH + ++G+Y+ G L GL++L G + ++ +++
Sbjct: 385 QGPGSLICH---------VDSEGRYNRAIIDAVGETVGQRLLGLDVLMRGTNLIIEMLKE 435
Query: 1143 D---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKK 1199
++ E H YPYDW+T KP+I+ A+ QWF + IK EAL L+ V F P ++
Sbjct: 436 MKGVLMSEERITHRYPYDWKTDKPIIVTATLQWFTSLKSIKEEALDALKNVIFHPAESRN 495
Query: 1200 SLRDQIAQRPYWCISRQRVWGVPIPVFY---DGDTIIVNEANIKHFCTLIDEHGPDFWWS 1256
L + R WCISRQRVWG PIP + G+ ++ ++ + H +++++ GP +WW
Sbjct: 496 RLESFVRSRSEWCISRQRVWGAPIPSLHHLPSGEAVLTQDS-LAHILSVLEDKGPGYWWD 554
Query: 1257 LPVEQLLNTS-DVNSNVTKSNQ 1277
PV + + +S N +V+ N+
Sbjct: 555 GPVAEFIPSSMRKNRSVSSLNR 576
>gi|189485620|ref|YP_001956561.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287579|dbj|BAG14100.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 929
Score = 342 bits (877), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 213/662 (32%), Positives = 342/662 (51%), Gaps = 71/662 (10%)
Query: 393 KPEALVCKTVGNILGRVGITHDRP--------GTALAESELEYKPDHISKSIYLKIKLNQ 444
K E + K G+++ + I + TA+A++E+EY D+ S SI++K ++
Sbjct: 163 KYEMFIVKVFGDLVEKGFIYRKKKPVYWCPTCETAMADAEVEY-SDYSSDSIFVKFQIIL 221
Query: 445 VPAHLLEGA---TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN-----VIVAK 496
+P D LIWTTTPW+LPAN +AFN EY+ A K + +IVAK
Sbjct: 222 LPEPFKTKEILLKDFSVLIWTTTPWTLPANVALAFNKESEYAAAVYKFEDSREEKLIVAK 281
Query: 497 CLVENLKWTFQT-DIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVH 555
L EN+K + ++V + G + +P+ E R + + AGFVS GTG+VH
Sbjct: 282 ALAENVKDKIKAVSFEIVWEAKGIDFVSLKCRNPLV-EDRQSQGIVAGFVSIEDGTGIVH 340
Query: 556 CAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL-VEPDV 614
AP HGQ+D+ L + +++ + ++G Y+ + P E ++I + L E +
Sbjct: 341 IAPGHGQEDYQAGLEYGLEIISPVNDKGLYTKEV-PEFENIHIYKANPLIIGKLDREGKI 399
Query: 615 LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER--IKPEALACLEEVNFVPESAKKTLR 672
L HSYP+ WR P+I +A+ QWF+ E ++ + L ++ V ++PE + +
Sbjct: 400 LAKLRLTHSYPHCWRCGNPIIFRATPQWFLSVEHNDLRKKLLEAVKTVRWIPEYGENRIT 459
Query: 673 DQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVE 730
+ RP WC+SRQR+WGVPIPVFY + +++ I L E G D W+ +S +
Sbjct: 460 AMLEGRPDWCLSRQRLWGVPIPVFYCKECGEPLLDSKVIDKISALFGEKGSDLWFEVSEK 519
Query: 731 QLLNTSDV------NSNVTKSNDILDIWFDSGISWSHVLK-------DKPAHVYMEGMDQ 777
+LL + +++ K DILD+WFDSG+S+ VL + PA +Y+EG DQ
Sbjct: 520 ELLKGTGAKCLSCNSASFKKEEDILDVWFDSGVSYEAVLSSGNYKDLEYPADLYIEGSDQ 579
Query: 778 INGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPA 837
GWF +S++ SVA+K +P++NV HGFVVD +G KMSKS+GN++S+ ++
Sbjct: 580 HRGWFQTSMIPSVAVKGKSPYKNVLTHGFVVDGQGKKMSKSIGNIVSSDNL--------- 630
Query: 838 YEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKI 897
+ YG DV+R W+A+ K+ + I I+ D +KI
Sbjct: 631 --------------------INKYGADVVRLWIASSDYKE-DIRISDEIIRGLSDTYRKI 669
Query: 898 RSSLRYLLGVLHNHSESTG---SISRYVDVYMLKRLCEFQNTMDTLYGEFQYARASRVLL 954
R+++R+LLG + + + D Y L RL + + Y +++ +A+ +
Sbjct: 670 RNTIRFLLGNIGDFDLKKALPFKDMQETDKYALSRLQQLISISLAAYESYEFHKAAAAIG 729
Query: 955 NFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYS 1014
NF LS FY ++KD LYCD +G R S + I V++R ++PI+ AEE +
Sbjct: 730 NFCTVFLSGFYLDVLKDVLYCDKKDGIERKSAQSAMLKICSVIIRLISPILSFTAEEAWR 789
Query: 1015 HL 1016
L
Sbjct: 790 EL 791
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 223/402 (55%), Gaps = 25/402 (6%)
Query: 10 WQREAL--------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
W RE L K +FI HDGPPYAN HIG +NK+LKD ++ + G V +
Sbjct: 35 WDRERLYVKICEKNKDKEKFIFHDGPPYANANIHIGTGLNKVLKDFIIKYRSMSGNYVPF 94
Query: 62 VPGWDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
PGWDCHGLPIE LK + + + + RK+A +FA + + QK+EF+ GV+ADW+
Sbjct: 95 TPGWDCHGLPIEQLVLKEMKTDKSKVDRVVFRKQAADFASKFVEIQKSEFKRLGVIADWD 154
Query: 119 HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKS 178
H Y T D +Y + F +L ++ +IYR KPVYW P+ TA+A++E+EY D+ S S
Sbjct: 155 HP-YLTLDPKYEMFIVKVFGDLVEKGFIYRKKKPVYWCPTCETAMADAEVEY-SDYSSDS 212
Query: 179 IYLKIKLNQVPAHLLEGA---TDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN- 234
I++K ++ +P D LIWTTTPW+LPAN +AFN EY+ A K +
Sbjct: 213 IFVKFQIILLPEPFKTKEILLKDFSVLIWTTTPWTLPANVALAFNKESEYAAAVYKFEDS 272
Query: 235 ----VIVAKCLVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVS 289
+IVAK L E++K + E+V + G + +P+ E R + + AGFVS
Sbjct: 273 REEKLIVAKALAENVKDKIKAVSFEIVWEAKGIDFVSLKCRNPLV-EDRQSQGIVAGFVS 331
Query: 290 SSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQV 349
GTG+VH AP HGQ+D+ L + +++ + ++G Y+ + P E ++I +
Sbjct: 332 IEDGTGIVHIAPGHGQEDYQAGLEYGLEIISPVNDKGLYTKEV-PEFENIHIYKANPLII 390
Query: 350 LHL-VEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTE 390
L E +L HSYP+ WR P+I +A+ QWF+ E
Sbjct: 391 GKLDREGKILAKLRLTHSYPHCWRCGNPIIFRATPQWFLSVE 432
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHL-VEPDVLWTENYQHSYPYDWRTKKPVILK 1167
+ ++G Y+ + P E ++I + L E +L HSYP+ WR P+I +
Sbjct: 364 VNDKGLYTKEV-PEFENIHIYKANPLIIGKLDREGKILAKLRLTHSYPHCWRCGNPIIFR 422
Query: 1168 ASQQWFIDTER--IKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A+ QWF+ E ++ + L ++ V ++PE + + + RP WC+SRQR+WGVPIPV
Sbjct: 423 ATPQWFLSVEHNDLRKKLLEAVKTVRWIPEYGENRITAMLEGRPDWCLSRQRLWGVPIPV 482
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLLNTS 1266
FY + +++ I L E G D W+ + ++LL +
Sbjct: 483 FYCKECGEPLLDSKVIDKISALFGEKGSDLWFEVSEKELLKGT 525
>gi|417796573|ref|ZP_12443781.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
gi|334268563|gb|EGL86997.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
Length = 917
Score = 342 bits (877), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 320/622 (51%), Gaps = 62/622 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHA--LIWTTTPWSLPANQFIA 475
++LAE+E+EY D S SIY+ + +G D A +IWTTTPW++P+N I
Sbjct: 191 SSLAEAEIEYH-DKRSASIYVAFDVKDD-----KGVVDADAKFIIWTTTPWTIPSNVAIT 244
Query: 476 FNPALEYSVASVKGANVIVAKCL----VENLKWTFQTDIDVVCDFPGQYLQDITYIHPIN 531
+P L+Y +V G I+A+ L E L W + I + ++ G+ L+ + HP
Sbjct: 245 VHPELKYGQYNVNGEKYIIAEALSDAVAEALDWD-KASIKLEKEYTGKELEYVVAQHPF- 302
Query: 532 KEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGP 591
R+ ++ V++ GTG VH AP HG+DD+++ ++PV++ I ++G + + G
Sbjct: 303 -LDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVISPIDDKGVLTEEGGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWTENY-QHSYPYDWRTKKPVILKASQQWFIDTERIK 650
EG+ K L E L ++ HSYP+DWRTKKPVI +A+ QWF +++
Sbjct: 362 -FEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY-DGDTIIVNEANI 709
+ L +E NF + + + + R W ISRQRVWGVP+PVFY + II+ + +
Sbjct: 421 QDILDAIENTNFKVNWGETRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETV 480
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
H L EHG + W+ + LL + N TK DI+D+WFDSG S VL+
Sbjct: 481 NHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE 540
Query: 765 DKP-----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSV 819
+P A +Y+EG DQ GWF SS+ TSVA + +P++ + HGFV+D +G KMSKS+
Sbjct: 541 TRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSL 600
Query: 820 GNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPT 879
GNVI + + G D+ R WV +
Sbjct: 601 GNVIVPDQVVKQK-----------------------------GADIARLWVTS-TDYLAD 630
Query: 880 VPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISRY----VDVYMLKRLCEFQN 935
V I IL + D +KIR++LR++LG +++ + T SI VD Y+L RL EF
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690
Query: 936 TMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFH 995
+ Y F Y + + NF+ ELS FY KD LY + + R S L+ I
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750
Query: 996 VLLRTVAPIMPHLAEEVYSHLP 1017
+ + +API+ H AEEV+SH P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 226/395 (57%), Gaps = 22/395 (5%)
Query: 13 EALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPI 72
E G FILHDGPPYANG H+GHA+NKILKD +R +QG YVPGWD HGLPI
Sbjct: 42 EKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPI 101
Query: 73 ELKAITSKD---KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEY 129
E +A+T K K +S + R+K K FALE I QK +F GV D+ ++ Y T EY
Sbjct: 102 E-QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDF-NDPYITLKPEY 159
Query: 130 VKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVP 189
Q+ F + + IY+ KPVYWSPSS ++LAE+E+EY D S SIY+ +
Sbjct: 160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYH-DKRSASIYVAFDVKDD- 217
Query: 190 AHLLEGATDLHA--LIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCL----VE 243
+G D A +IWTTTPW++P+N I +P L+Y +V G I+A+ L E
Sbjct: 218 ----KGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAE 273
Query: 244 SLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAH 303
+L W + I++ ++ G+ L+ + HP R+ ++ V++ GTG VH AP H
Sbjct: 274 ALDWD-KASIKLEKEYTGKELEYVVAQHPF--LDRESLVINGDHVTTDAGTGCVHTAPGH 330
Query: 304 GQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTENY 363
G+DD+++ ++PV++ I ++G + + G EG+ K L E L ++
Sbjct: 331 GEDDYIVGQKYELPVISPIDDKGVLTEEGGQ-FEGMFYDKANKAVTDLLTEKGALLKLDF 389
Query: 364 -QHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
HSYP+DWRTKKPVI +A+ QWF +++ + L
Sbjct: 390 ITHSYPHDWRTKKPVIFRATPQWFASISKVRQDIL 424
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 1152 HSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYW 1211
HSYP+DWRTKKPVI +A+ QWF +++ + L +E NF + + + + R W
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGETRIYNMVRDRGEW 451
Query: 1212 CISRQRVWGVPIPVFY-DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
ISRQRVWGVP+PVFY + II+ + + H L EHG + W+ + LL
Sbjct: 452 VISRQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLL 504
>gi|449870288|ref|ZP_21780578.1| isoleucyl-tRNA synthetase [Streptococcus mutans 8ID3]
gi|449156830|gb|EMB60288.1| isoleucyl-tRNA synthetase [Streptococcus mutans 8ID3]
Length = 930
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 326/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHIANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFEDLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ ++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I + + + PI+PH +EE++S+L + F
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KDI +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGDHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHIANLFEEHGSVIWWQREAKDLL 504
>gi|392960483|ref|ZP_10325951.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421054760|ref|ZP_15517725.1| isoleucyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421061531|ref|ZP_15523846.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans B3]
gi|421066816|ref|ZP_15528370.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A12]
gi|421071623|ref|ZP_15532739.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392440441|gb|EIW18121.1| isoleucyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392446888|gb|EIW24159.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392449282|gb|EIW26411.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans B3]
gi|392453096|gb|EIW30000.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A12]
gi|392455060|gb|EIW31867.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
Length = 928
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 327/623 (52%), Gaps = 54/623 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEG--ATDLHALIWTTTPWSLPANQFIA 475
TALAE+E+EY + S +IY+K L L G A +++ +IWTTTPW++PAN IA
Sbjct: 191 TALAEAEIEY-AEKKSHTIYVKFPLVDDKGTLPVGINAENVYGVIWTTTPWTMPANVAIA 249
Query: 476 FNPALEYSVASVKGANVIVAKCLVENLKWTFQTD-IDVVCDFPGQYLQDITYIHPINKEQ 534
+P LEY+ +G ++A L+E + + + ++ G L+ + + HP +
Sbjct: 250 VHPELEYAWVESQGEIYLLAVELIEAVAKDNKLESYTILSTLKGADLEGVVFSHPFI--E 307
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
R+ ++ A +V+ +GTG VH AP HG DDF + +P++N + + G+++ + G E
Sbjct: 308 RESIIVLADYVTLEQGTGCVHTAPGHGPDDFETGIRHGLPIINPVDHAGRFTAEGGI-FE 366
Query: 595 GLNILGDGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEA 653
G+ I + L +L + +H Y + WR K PVI +A++QWF + + +A
Sbjct: 367 GMLIHDADVPVIKELAARGMLLGKGKIKHQYAHCWRCKNPVIYRATEQWFASVDGFREQA 426
Query: 654 LACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKH 711
L +++V ++P + + + +A R WCISRQRVWGVPIP+FY + ++N+ I
Sbjct: 427 LQAIKDVQWIPGWGEDRIHNMVADRHDWCISRQRVWGVPIPIFYCTQCNEHVINDITITA 486
Query: 712 FCTLIDEHGPDFWWSLSVEQLLNTSDVNSNV-----TKSNDILDIWFDSGISWSHVLKDK 766
L + G D WW+ ++L S+ K DI+D+WFDSG S + VL+
Sbjct: 487 VKNLFRQEGSDAWWAKDSSEILPEGFTCSHCGHDSFRKETDIMDVWFDSGSSHAAVLEQH 546
Query: 767 -----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGN 821
PA +Y+EG DQ GWF SSLLTSVA K AP++ V HGFVVD G KMSKSVGN
Sbjct: 547 EELAWPADLYLEGSDQHRGWFQSSLLTSVATKGIAPYKAVLTHGFVVDGDGRKMSKSVGN 606
Query: 822 VISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVP 881
VI D+ + YG D+LR WVA+ A V
Sbjct: 607 VIFPQDV-----------------------------IKKYGADILRLWVAS-ADYQADVR 636
Query: 882 IGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSISR----YVDVYMLKRLCEFQNTM 937
+ +IL + +KIR++ RY+LG +H+ + T + +D + L RL + + +
Sbjct: 637 VSNDILKQLSEVYRKIRNTFRYILGSIHDFNPDTDRVGYNELLEIDRWALLRLEQVREKV 696
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y E+++ + NF +LS+ Y ++KDR+Y + R + ++ + L
Sbjct: 697 TKAYEEYEFHLIYHTVHNFCTVDLSSIYLDILKDRVYTALPASKERRAAQTVMYELVSTL 756
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQ 1020
+R ++P++ AEEV+ H+ Q
Sbjct: 757 VRLISPVLTFTAEEVWQHMKQEQ 779
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 229/387 (59%), Gaps = 12/387 (3%)
Query: 18 KPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIE---L 74
KP+FILHDGPPYANG HIGHA+NKILKD+ L+ L+G YVPGWD HGLPIE +
Sbjct: 46 KPKFILHDGPPYANGDIHIGHALNKILKDMILKYKSLRGFNTPYVPGWDTHGLPIEHAAI 105
Query: 75 KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYHTFDKEYVKNQL 134
K + L PLD+R++ K++AL+ ++TQ+ +F+ G+ ADW+ N Y T Y Q+
Sbjct: 106 KILGLNRHELKPLDLRRECKDYALKFVDTQRQDFKRLGIGADWD-NPYVTLRPVYEAKQI 164
Query: 135 CQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKIKLNQVPAHLLE 194
F + K+ +IY+ LK VYW S TALAE+E+EY + S +IY+K L L
Sbjct: 165 EVFGEMAKKGHIYKGLKSVYWCTSCETALAEAEIEY-AEKKSHTIYVKFPLVDDKGTLPV 223
Query: 195 G--ATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVESLKWTFQTD 252
G A +++ +IWTTTPW++PAN IA +P LEY+ +G ++A L+E++ + +
Sbjct: 224 GINAENVYGVIWTTTPWTMPANVAIAVHPELEYAWVESQGEIYLLAVELIEAVAKDNKLE 283
Query: 253 -IEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLA 311
++ G L+ + + HP +R+ ++ A +V+ +GTG VH AP HG DDF
Sbjct: 284 SYTILSTLKGADLEGVVFSHPFI--ERESIIVLADYVTLEQGTGCVHTAPGHGPDDFETG 341
Query: 312 LAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTE-NYQHSYPYD 370
+ +P++N + + G+++ + G EG+ I + L +L + +H Y +
Sbjct: 342 IRHGLPIINPVDHAGRFTAEGGI-FEGMLIHDADVPVIKELAARGMLLGKGKIKHQYAHC 400
Query: 371 WRTKKPVILKASQQWFIDTERIKPEAL 397
WR K PVI +A++QWF + + +AL
Sbjct: 401 WRCKNPVIYRATEQWFASVDGFREQAL 427
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTE-NYQHSYPYDWRTKKPV 1164
+N + + G+++ + G EG+ I + L +L + +H Y + WR K PV
Sbjct: 349 INPVDHAGRFTAEGGI-FEGMLIHDADVPVIKELAARGMLLGKGKIKHQYAHCWRCKNPV 407
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A++QWF + + +AL ++ V ++P + + + +A R WCISRQRVWGVPIP
Sbjct: 408 IYRATEQWFASVDGFREQALQAIKDVQWIPGWGEDRIHNMVADRHDWCISRQRVWGVPIP 467
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY + ++N+ I L + G D WW+ ++L
Sbjct: 468 IFYCTQCNEHVINDITITAVKNLFRQEGSDAWWAKDSSEIL 508
>gi|456371345|gb|EMF50241.1| Isoleucyl-tRNA synthetase [Streptococcus parauberis KRS-02109]
Length = 931
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 212/645 (32%), Positives = 326/645 (50%), Gaps = 64/645 (9%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANKVKDGKGKL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGANV--IVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
P ++Y G++ +VA+ L+E+L F + +V+ F G L+ I HP + E
Sbjct: 247 PDMDYVQVKPAGSDCKYVVAEGLLESLSNKFGWPEFEVLNSFKGSELEYIVTEHPWDTEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V+ GTG+VH AP G+DD+ + K+ V + +G +AGP +
Sbjct: 307 DELVIL-GDHVTLETGTGIVHTAPGFGEDDYNVGSKYKLEVAVTVDERGIMMENAGPDFQ 365
Query: 595 GLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G D+V +V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 366 G-----QFYDKVTPIVKEKLGDLLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSDFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L +E+VNF P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 421 QEILDEIEKVNFHPSWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT 480
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVL 763
H L ++ G WW ++LL + N TK DI+D+WFDSG SW+ V+
Sbjct: 481 -DHIANLFEQEGSIIWWKKEAKELLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVM 539
Query: 764 KDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
+ PA +Y+EG DQ GWF SSL+TSVA+ +P++ V GFV+D KG KMSKS
Sbjct: 540 NARGHLNYPADLYLEGSDQYRGWFNSSLITSVAVNGHSPYKEVLSQGFVLDGKGEKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
GN I D+T+ YG ++LR WV + D
Sbjct: 600 KGNTILPSDVTK-----------------------------QYGAEILRLWVTS-VDTDN 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQ 934
V + +IL + +KIR++LR+L+ + + +T +++ VD YM + +
Sbjct: 630 DVRVSMDILGQVSETYRKIRNTLRFLIANTSDFNPNTDAVAYENLSAVDKYMTIKFNKLV 689
Query: 935 NTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIF 994
++T Y + + + ++NFV +LSAFY KD +Y + N R ++I
Sbjct: 690 ELINTSYASYDFMAIYKAVVNFVTIDLSAFYLDFAKDVVYIEGANSPERRRMQTVFYDIL 749
Query: 995 HVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHFKVYLQYSGSI 1039
+ + + PI+PH AEE++S+L F + Y G +
Sbjct: 750 VKITKLLTPILPHTAEEIWSYLEFESEEFVQLSELPLAESYEGEV 794
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 225/402 (55%), Gaps = 20/402 (4%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ LY ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G + +VPG
Sbjct: 34 ANLYKKRQELNEGKPSFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFQAPFVPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + + + + +AL ++ Q+ +F+ GV ADWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEMDLAEYLEMCRTYALSQVDKQREDFKRLGVSADWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y +Q+ F + + YIYR KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 VTLMPQYEADQIRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV--IVAKC 240
K+ L TD + ++WTTTP+++ A++ + P ++Y G++ +VA+
Sbjct: 212 NKVKDGKGKL---DTDTYIVVWTTTPFTVTASRGLTVGPDMDYVQVKPAGSDCKYVVAEG 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ESL F + EV+ F G L+ I HP + E +L +L V+ GTG+VH
Sbjct: 269 LLESLSNKFGWPEFEVLNSFKGSELEYIVTEHPWDTEVDELVIL-GDHVTLETGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD--- 356
AP G+DD+ + K+ V + +G +AGP + G D+V +V+
Sbjct: 328 APGFGEDDYNVGSKYKLEVAVTVDERGIMMENAGPDFQ-----GQFYDKVTPIVKEKLGD 382
Query: 357 -VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + E L
Sbjct: 383 LLLASEVINHSYPFDWRTKKPIIWRAVPQWFASVSDFRQEIL 424
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP +G + D+V +V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VDERGIMMENAGPDFQG-----QFYDKVTPIVKEKLGDLLLASEVINHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + E L +E VNF P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSDFRQEILDEIEKVNFHPSWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L ++ G WW ++LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHIANLFEQEGSIIWWKKEAKELL 504
>gi|389740960|gb|EIM82150.1| isoleucyl-tRNA synthetase [Stereum hirsutum FP-91666 SS1]
Length = 1078
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 232/706 (32%), Positives = 340/706 (48%), Gaps = 135/706 (19%)
Query: 418 TALAESELEYKPDHISKSIYLKIK-------LNQVPAHLL--EGATDLHALIWTTTPWSL 468
+ALAE+ELEY+ DH+S S+Y+ K LN +LL +G D+ L+WTTTPW+L
Sbjct: 229 SALAEAELEYQDDHVSHSVYVAFKVDIQAPGLNTTLRNLLASQGLEDVRLLVWTTTPWTL 288
Query: 469 PANQFIAFNPALEYSVASVKGANVIVAKCLVENLKWTFQT--DIDVVCDFPGQYLQDITY 526
AN IA +P ++Y V ++ ++ E L D+DV+ + G L D Y
Sbjct: 289 TANMGIAVHPEMKYLVVRQNDSSGLLV-LAAERLSALHDVIGDVDVLAEVKGSELVDTRY 347
Query: 527 IHPINKEQRD-------------LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL-----A 568
HPI R L++LP+G V+ GTGLVHCAPAHG +D+ L
Sbjct: 348 -HPIFDSLRSKPSSVSEENSKGTLRILPSGHVTPDSGTGLVHCAPAHGAEDYSLFHSLGL 406
Query: 569 LAEKIPVLNLITNQG---KYSPD--------AGPGLEGLNILGDGKDQVLHLVEPD---- 613
L+ P ++ + G Y+ AG L G +L DG +++ ++E
Sbjct: 407 LSASSPASTMVCHVGPLGTYTSAVKDVVGEVAGQRLVGKAVLSDGGKEIVQVLEEMGERG 466
Query: 614 ----VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEALACLEEVNFVPESAKK 669
++ + +H YPYDW+TK+P+I+ A+ QWF + + IK +AL L +VNF P ++
Sbjct: 467 NGKVLVKRQRIKHRYPYDWKTKEPIIVTATSQWFANLDTIKEDALQALRQVNFFPSVSRN 526
Query: 670 TLRDQIAQRPYWCISRQRVWGVPIPVFY---------------DGDTIIVNEANIKHFCT 714
L I R WCISRQRVWGVPIP + T + A + H
Sbjct: 527 RLDSFIDSRSEWCISRQRVWGVPIPSLHHVPILDSPQSLHSANHEGTAHLTPATLSHILN 586
Query: 715 LIDEHGPDFWWSLSVEQLL-----------NTSDVNSNV----TKSNDILDIWFDSGISW 759
++D+ G +WW E+ + + S+ V K D +D+WFDSG SW
Sbjct: 587 ILDKKGVAYWWEGPAEEFVPPELKAEMEVKSKSESEEGVKWEWKKGMDTMDVWFDSGSSW 646
Query: 760 SHV----LKDKP-AHVYMEGMDQINGWFMSSLLTSVALKH-------------------T 795
S + ++ +P A V +EG DQ GWF S LLTS+
Sbjct: 647 SMLEERDIEGRPRADVCLEGSDQHRGWFQSLLLTSLGADEQAGSASTKAGEGKAAVRDVK 706
Query: 796 APFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGA 855
AP+ + HG V+D+KG KMSKS+GN+IS + G K
Sbjct: 707 APYGTLITHGMVLDQKGKKMSKSLGNIISPMTVIYGGKD--------------------K 746
Query: 856 KKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSEST 915
K+ PAYG DVLR W +A +P+G+ IL+ S + ++KIR+S R+ LG + N
Sbjct: 747 KREPAYGADVLRLW-SATVEYWRDMPLGQTILSQSAESLRKIRNSARFALGNIGNREARE 805
Query: 916 GSISRYVDV--------YMLKRLCEFQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFT 967
++ VDV Y++ L + + T Y + +A+ L NF LSA YF
Sbjct: 806 RHVA--VDVKDMGLAEKYVMHELYKLERTALDGYATYNFAKVVNSLSNFANITLSALYFD 863
Query: 968 LVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVY 1013
+ KD LY DS R + L +I + +API+PHLAEE++
Sbjct: 864 ITKDCLYADSTESLERRRIVTVLQHILNTTTHVMAPIIPHLAEEIH 909
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/449 (41%), Positives = 253/449 (56%), Gaps = 59/449 (13%)
Query: 2 CGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHY 61
CG LY WQRE G P F+LHDGPPYANG H+GHA+NK+LKDI R +L G +VHY
Sbjct: 69 CG--SLYLWQRENAQG-PSFVLHDGPPYANGHLHMGHALNKVLKDIINRYHLSLGHKVHY 125
Query: 62 VPGWDCHGLPIELKAI--TSKD-KLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWE 118
VPGWDCHGLPIE K + KD + L P IR A+ A I QK EF++ G++ADW
Sbjct: 126 VPGWDCHGLPIENKTLHDLGKDSQSLPPTTIRDAARKTAEAEIERQKGEFQALGIMADWS 185
Query: 119 -HNCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSK 177
N Y T D +Y QL F + ++ IYR +PV++SPSSR+ALAE+ELEY+ DHVS
Sbjct: 186 TENTYRTLDHDYEIRQLRVFQKMVEKGLIYRHYRPVHYSPSSRSALAEAELEYQDDHVSH 245
Query: 178 SIYLKIK-------LNQVPAHLL--EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVA 228
S+Y+ K LN +LL +G D+ L+WTTTPW+L AN IA +P ++Y V
Sbjct: 246 SVYVAFKVDIQAPGLNTTLRNLLASQGLEDVRLLVWTTTPWTLTANMGIAVHPEMKYLVV 305
Query: 229 ---SVKGANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRD------ 279
G V+ A+ L S D++V+ + G L D Y HPI R
Sbjct: 306 RQNDSSGLLVLAAERL--SALHDVIGDVDVLAEVKGSELVDTRY-HPIFDSLRSKPSSVS 362
Query: 280 -------LKLLPAGFVSSSKGTGLVHCAPAHGQDDFLL-----ALAEKIPVLNLITN--- 324
L++LP+G V+ GTGLVHCAPAHG +D+ L L+ P ++ +
Sbjct: 363 EENSKGTLRILPSGHVTPDSGTGLVHCAPAHGAEDYSLFHSLGLLSASSPASTMVCHVGP 422
Query: 325 QGKYSPD--------AGPGLEGLNILGDGKDQVLHLVEPD--------VLWTENYQHSYP 368
G Y+ AG L G +L DG +++ ++E ++ + +H YP
Sbjct: 423 LGTYTSAVKDVVGEVAGQRLVGKAVLSDGGKEIVQVLEEMGERGNGKVLVKRQRIKHRYP 482
Query: 369 YDWRTKKPVILKASQQWFIDTERIKPEAL 397
YDW+TK+P+I+ A+ QWF + + IK +AL
Sbjct: 483 YDWKTKEPIIVTATSQWFANLDTIKEDAL 511
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 23/168 (13%)
Query: 1119 AGPGLEGLNILGEGKDQVLHLVEPD--------VLWTENYQHSYPYDWRTKKPVILKASQ 1170
AG L G +L +G +++ ++E ++ + +H YPYDW+TK+P+I+ A+
Sbjct: 438 AGQRLVGKAVLSDGGKEIVQVLEEMGERGNGKVLVKRQRIKHRYPYDWKTKEPIIVTATS 497
Query: 1171 QWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFY--- 1227
QWF + + IK +AL L VNF P ++ L I R WCISRQRVWGVPIP +
Sbjct: 498 QWFANLDTIKEDALQALRQVNFFPSVSRNRLDSFIDSRSEWCISRQRVWGVPIPSLHHVP 557
Query: 1228 ------------DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
T + A + H ++D+ G +WW P E+ +
Sbjct: 558 ILDSPQSLHSANHEGTAHLTPATLSHILNILDKKGVAYWWEGPAEEFV 605
>gi|24379039|ref|NP_720994.1| isoleucyl-tRNA synthetase [Streptococcus mutans UA159]
gi|449863372|ref|ZP_21778218.1| isoleucyl-tRNA synthetase [Streptococcus mutans U2B]
gi|449984142|ref|ZP_21818859.1| isoleucyl-tRNA synthetase [Streptococcus mutans NFSM2]
gi|81452146|sp|Q8DVD3.1|SYI_STRMU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|24376934|gb|AAN58300.1|AE014900_8 isoleucine-tRNA synthetase [Streptococcus mutans UA159]
gi|449180610|gb|EMB82763.1| isoleucyl-tRNA synthetase [Streptococcus mutans NFSM2]
gi|449265101|gb|EMC62430.1| isoleucyl-tRNA synthetase [Streptococcus mutans U2B]
Length = 930
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 326/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHIANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFEDLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ ++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I + + + PI+PH +EE++S+L + F
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KDI +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGDHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHIANLFEEHGSVIWWQREAKDLL 504
>gi|323352732|ref|ZP_08087702.1| isoleucine--tRNA ligase [Streptococcus sanguinis VMC66]
gi|322121768|gb|EFX93514.1| isoleucine--tRNA ligase [Streptococcus sanguinis VMC66]
Length = 930
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 206/624 (33%), Positives = 320/624 (51%), Gaps = 54/624 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y V G + +VA L+ +L F D+ V+ + GQ L I +HP +
Sbjct: 247 ADIDYVVVQPAGESRKFVVASELLNSLSDKFGWADVQVLATYRGQELNHIVTVHPWDTAV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP
Sbjct: 307 DELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFA 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLKDK-- 766
L +EHG WW + LL + N TK DI+D+WFDSG SW+ V+ ++
Sbjct: 485 QLFEEHGSIVWWKREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 767 ---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
PA +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYEELRSVDKYMTIRFNQLVETIRN 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I + +
Sbjct: 695 AYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDILVKITK 754
Query: 1000 TVAPIMPHLAEEVYSHLPSRQGTF 1023
+ PI+PH AEE++S+L F
Sbjct: 755 LLTPILPHTAEEIWSYLEHEAEEF 778
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP FILHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFILHDGPPYANGNIHVGHAMNKISKDIIVRSKSMAGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K L ++ +++AL + QK +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKELDLVEYLNMCRDYALSQVEKQKEDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
++ L TD + ++WTTTP+++ A++ + ++Y V G + +VA
Sbjct: 212 NRVKDGKGVL---DTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGESRKFVVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I +HP + +L +L V++ GTG+VH
Sbjct: 269 LLNSLSDKFGWADVQVLATYRGQELNHIVTVHPWDTAVDELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP G V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP G + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFAG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ I+H L +EHG WW + LL
Sbjct: 469 EDGTPIMTAETIEHVAQLFEEHGSIVWWKREAKDLL 504
>gi|158521204|ref|YP_001529074.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|158510030|gb|ABW66997.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 929
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 221/656 (33%), Positives = 334/656 (50%), Gaps = 67/656 (10%)
Query: 395 EALVCKTVGNI-LGRVGITHDRP-------GTALAESELEYKPDHISKSIYLKIKLNQVP 446
EA++ + N + + H +P TALAE+E+EY D S SI++K +
Sbjct: 161 EAIIARECCNCAINKSLFRHKKPIYWCCSCNTALAEAEIEYA-DERSPSIFVKFPATEDL 219
Query: 447 AHLL--EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANV-IVAKCLVENLK 503
A L+ +IWTTTPW+LPAN +A +P LEY K V I+A LV+
Sbjct: 220 ARLIPETAGKPTAVVIWTTTPWTLPANLAVALHPELEYVAIETKEHGVLILAAELVKQCM 279
Query: 504 WTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPAHGQ 562
F ++ + FPG L HP RD ++ A V+ GTG VH AP HG
Sbjct: 280 EIFGISEYTALKTFPGTLLDRTKVRHPFY--DRDSLVINANHVTLEAGTGCVHTAPGHGA 337
Query: 563 DDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWTEN-YQ 621
+D+ ALA + + + + + G++ D G + D + + + L + +
Sbjct: 338 EDYEAALAYGLEIYSPVDDNGRFI-DKVEQFAGKFVFDADADIIAAMKQNGALIAQKKFT 396
Query: 622 HSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLEEVNFVPESAKKTLRDQIAQRP 679
HSYP+ WR KKPVI +A+ QWF+ D ++ ++L ++ V ++P ++ + + IA RP
Sbjct: 397 HSYPHCWRCKKPVIFRATPQWFVSMDNTGLREKSLKEIDAVTWIPAWGRERIYNMIAHRP 456
Query: 680 YWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLSVEQLLNT-- 735
WC+SRQR WGVPI VF+ D +I+NEA L EHG D W+ ++ LL
Sbjct: 457 DWCVSRQRSWGVPITVFFCKDCGAVIMNEAIRDRIFALFTEHGADIWFDTDMKDLLGDDA 516
Query: 736 ---SDVNSNVTKSNDILDIWFDSGISWSHVLKDK-----PAHVYMEGMDQINGWFMSSLL 787
+ + + K DILD+WFDSG+S + VL+ + PA +Y+EG DQ GWF SSLL
Sbjct: 517 RCPACSSKELVKETDILDVWFDSGVSHAAVLEQRQDLGWPADLYLEGSDQHRGWFHSSLL 576
Query: 788 TSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVISAHDITQGAKKLPAYEKSVGNVIS 847
T+V + AP+++V HGFVVD G KMSKS+GNVI+ I +
Sbjct: 577 TAVGTRGRAPYKSVLTHGFVVDGNGKKMSKSMGNVIAPDAIIK----------------- 619
Query: 848 AHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIGKNILNSSQDDVQKIRSSLRYLLGV 907
YG ++LR WVAA ++ + I I+N D +K+R++ R++L
Sbjct: 620 ------------KYGAEILRLWVAASDYRE-DIRISDPIVNQLSDAYKKVRNTSRFMLAN 666
Query: 908 LHNHSESTGSISRYVDVYMLKR---LC--EFQNTMDTLYGEFQYARASRVLLNFVVNELS 962
L++ S ++ Y D+ L R LC + T Y +++ L N+ +LS
Sbjct: 667 LYDFSPEKDAVD-YSDLPELDRFALLCFGRLAEKLRTAYDTYEFHVVYHRLYNYCTLDLS 725
Query: 963 AFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLRTVAPIMPHLAEEVYSHLPS 1018
AFY +VKDRLY + R S ++ + + R +API+P AEEV+ LP+
Sbjct: 726 AFYLDIVKDRLYTSLPGSKERRSAQTVMYTLVEGIARLMAPILPFTAEEVWKFLPA 781
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 215/395 (54%), Gaps = 15/395 (3%)
Query: 5 SELY-SWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVP 63
++LY + Q EA + KP F+LHDGPPYANG HIG A+NKILKD RS + G RV YVP
Sbjct: 34 ADLYRAIQDEARDKKP-FVLHDGPPYANGHIHIGTALNKILKDFVTRSKRMAGFRVAYVP 92
Query: 64 GWDCHGLPIEL---KAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHN 120
GWDCHGLPIE K + + K +S L+ R + +A + I+ Q+ EF+ GV+ +WE N
Sbjct: 93 GWDCHGLPIEHNVDKELGPRKKEVSLLEKRGICRQYAQKFISIQREEFKRLGVMGEWE-N 151
Query: 121 CYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIY 180
Y T + Y + N ++R KP+YW S TALAE+E+EY D S SI+
Sbjct: 152 PYLTMNFAYEAIIARECCNCAINKSLFRHKKPIYWCCSCNTALAEAEIEYA-DERSPSIF 210
Query: 181 LKIKLNQVPAHLL--EGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVK--GANVI 236
+K + A L+ +IWTTTPW+LPAN +A +P LEY K G ++
Sbjct: 211 VKFPATEDLARLIPETAGKPTAVVIWTTTPWTLPANLAVALHPELEYVAIETKEHGVLIL 270
Query: 237 VAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGL 296
A+ + + ++ ++ + FPG L HP RD ++ A V+ GTG
Sbjct: 271 AAELVKQCMEIFGISEYTALKTFPGTLLDRTKVRHPFY--DRDSLVINANHVTLEAGTGC 328
Query: 297 VHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD 356
VH AP HG +D+ ALA + + + + + G++ D G + D + + +
Sbjct: 329 VHTAPGHGAEDYEAALAYGLEIYSPVDDNGRFI-DKVEQFAGKFVFDADADIIAAMKQNG 387
Query: 357 VLWTE-NYQHSYPYDWRTKKPVILKASQQWFIDTE 390
L + + HSYP+ WR KKPVI +A+ QWF+ +
Sbjct: 388 ALIAQKKFTHSYPHCWRCKKPVIFRATPQWFVSMD 422
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 1148 ENYQHSYPYDWRTKKPVILKASQQWFI--DTERIKPEALACLEGVNFVPESAKKSLRDQI 1205
+ + HSYP+ WR KKPVI +A+ QWF+ D ++ ++L ++ V ++P ++ + + I
Sbjct: 393 KKFTHSYPHCWRCKKPVIFRATPQWFVSMDNTGLREKSLKEIDAVTWIPAWGRERIYNMI 452
Query: 1206 AQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
A RP WC+SRQR WGVPI VF+ D +I+NEA L EHG D W+ ++ LL
Sbjct: 453 AHRPDWCVSRQRSWGVPITVFFCKDCGAVIMNEAIRDRIFALFTEHGADIWFDTDMKDLL 512
Query: 1264 N 1264
Sbjct: 513 G 513
>gi|359686909|ref|ZP_09256910.1| isoleucyl-tRNA synthetase [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750297|ref|ZP_13306583.1| isoleucine--tRNA ligase [Leptospira licerasiae str. MMD4847]
gi|418756910|ref|ZP_13313098.1| isoleucine--tRNA ligase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384116581|gb|EIE02838.1| isoleucine--tRNA ligase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404272900|gb|EJZ40220.1| isoleucine--tRNA ligase [Leptospira licerasiae str. MMD4847]
Length = 912
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 328/626 (52%), Gaps = 61/626 (9%)
Query: 417 GTALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAF 476
TA AE+E+EY P H S SIY+K + +G LIWTTTPW+LPAN I+F
Sbjct: 198 ATAHAEAEIEYYP-HKSPSIYVKFPI--------KGQVGKFCLIWTTTPWTLPANLAISF 248
Query: 477 NPALEYSVASV-KGANVIVAKCLVENLKWTFQTDIDVVCDFPGQYLQDITYIHPINKEQR 535
NP EYS + G +++A L E ++ + + + L + + HP +Q
Sbjct: 249 NPKFEYSFYTTPNGEELLLADGLKEAVEKAAEVQLTKKISVSQEELSKMIFRHPF-LDQD 307
Query: 536 DLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEG 595
+ L V+ GTG VH AP HGQDD+ + LA + + + + G+Y+ D P ++G
Sbjct: 308 SIPLF-GEHVTLDAGTGAVHTAPGHGQDDYKIGLAAGLEPYSPVDDYGRYT-DEFPMMKG 365
Query: 596 LNILGDGKDQVLHLVEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWF--IDTERIKP 651
+ + D +++ L+ +L ++HSYP+ WR+KKP+I +A+ QWF ID + ++
Sbjct: 366 IKVW-DANPKIVELLREKGLLLHYSEFEHSYPHSWRSKKPLIFRATPQWFFKIDYQELRE 424
Query: 652 EALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEANI 709
++L +++V ++P +R + RP WC+SRQR WGVPIP F + + ++ ++
Sbjct: 425 KSLKAIDKVTWIPNWGITRIRSMVETRPDWCLSRQRNWGVPIPAFTCENCNETHLDAKSV 484
Query: 710 KHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSHVLK 764
K F L+ E G + W+S + LL + +S+ K DILD+WFDSG+S VLK
Sbjct: 485 KFFTDLVREKGIEIWYSEPADSLLPPGSKCSKCGSSSFRKGKDILDVWFDSGVSNFAVLK 544
Query: 765 DK----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVG 820
++ PA +Y+EG DQ GWF SSL S+AL+ P+++V HG+V+DE+G MSKS+G
Sbjct: 545 ERGNEPPADLYLEGSDQHRGWFQSSLWPSMALRGIPPYKSVLTHGYVLDEQGRAMSKSLG 604
Query: 821 NVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTV 880
N I ++I+ YG D+LR WV++ +D V
Sbjct: 605 NGIDP----------------TTDIINV------------YGADILRLWVSSQDFRD-DV 635
Query: 881 PIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTG---SISRYVDVYMLKRLCEFQNTM 937
+GK L D+ +KIR++ RYLLG L H+ S VD Y L +L + +
Sbjct: 636 RVGKEGLKIIADNYRKIRNTFRYLLGNLAGHTSDQNLEVSDLEEVDKYYLSKLAQLSEEL 695
Query: 938 DTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVL 997
Y +Q+ + + LL F LS YF +++DR+YCD + + R S L + L
Sbjct: 696 KYHYENYQFHQVYQKLLLFCTVTLSQDYFEMIRDRMYCDRRDSKTRRSSCTALQIVLETL 755
Query: 998 LRTVAPIMPHLAEEVYSHLPSRQGTF 1023
API+ EEV+ ++ F
Sbjct: 756 CIYSAPILSFTTEEVWKENGKKESVF 781
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 239/442 (54%), Gaps = 39/442 (8%)
Query: 6 ELYSWQREAL--------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGK 57
++ +WQ E + +P+FILHDGPPYANG H GHA+NKILKD+ ++S G
Sbjct: 34 QIKTWQSEKILRKMQEKRKDRPQFILHDGPPYANGNFHTGHALNKILKDMIVKSKFFAGY 93
Query: 58 RVHYVPGWDCHGLPIE---LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVL 114
+ +PGWDCHGLPIE LK + K K + P ++RK +++A + + Q + + L
Sbjct: 94 QTDMIPGWDCHGLPIEVQVLKNLGKKAKEIGPEELRKLCRDYAEQFVQKQGQDLSRF--L 151
Query: 115 ADWEH-NCYHTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPD 173
WE Y T ++ + F +L+++ Y+YR KPVYW TA AE+E+EY P
Sbjct: 152 CFWEEGKIYKTMSPDFEAKIVEVFGDLFEKGYVYRGKKPVYWCIELATAHAEAEIEYYP- 210
Query: 174 HVSKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASV-KG 232
H S SIY+K ++G LIWTTTPW+LPAN I+FNP EYS + G
Sbjct: 211 HKSPSIYVKFP--------IKGQVGKFCLIWTTTPWTLPANLAISFNPKFEYSFYTTPNG 262
Query: 233 ANVIVAKCLVESLKWTFQTDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSK 292
+++A L E+++ + + + L + + HP +Q + L V+
Sbjct: 263 EELLLADGLKEAVEKAAEVQLTKKISVSQEELSKMIFRHPF-LDQDSIPLF-GEHVTLDA 320
Query: 293 GTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHL 352
GTG VH AP HGQDD+ + LA + + + + G+Y+ D P ++G+ + D +++ L
Sbjct: 321 GTGAVHTAPGHGQDDYKIGLAAGLEPYSPVDDYGRYT-DEFPMMKGIKVW-DANPKIVEL 378
Query: 353 VEPD--VLWTENYQHSYPYDWRTKKPVILKASQQWF--IDTERIKPEALVCKTVGNILGR 408
+ +L ++HSYP+ WR+KKP+I +A+ QWF ID + ++ ++L +
Sbjct: 379 LREKGLLLHYSEFEHSYPHSWRSKKPLIFRATPQWFFKIDYQELREKSLKAIDKVTWIPN 438
Query: 409 VGITHDRPGTALAESELEYKPD 430
GIT R S +E +PD
Sbjct: 439 WGITRIR-------SMVETRPD 453
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 92/160 (57%), Gaps = 6/160 (3%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLW-TENYQHSYPYDWRTKKPVILK 1167
+ + G+Y+ D P ++G+ + V L E +L ++HSYP+ WR+KKP+I +
Sbjct: 350 VDDYGRYT-DEFPMMKGIKVWDANPKIVELLREKGLLLHYSEFEHSYPHSWRSKKPLIFR 408
Query: 1168 ASQQWF--IDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPV 1225
A+ QWF ID + ++ ++L ++ V ++P +R + RP WC+SRQR WGVPIP
Sbjct: 409 ATPQWFFKIDYQELREKSLKAIDKVTWIPNWGITRIRSMVETRPDWCLSRQRNWGVPIPA 468
Query: 1226 FY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
F + + ++ ++K F L+ E G + W+S P + LL
Sbjct: 469 FTCENCNETHLDAKSVKFFTDLVREKGIEIWYSEPADSLL 508
>gi|450169792|ref|ZP_21883170.1| isoleucyl-tRNA synthetase [Streptococcus mutans SM4]
gi|449246649|gb|EMC44947.1| isoleucyl-tRNA synthetase [Streptococcus mutans SM4]
Length = 930
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 326/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHVANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFEDLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ ++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I + + + PI+PH +EE++S+L + F
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KDI +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGDHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVANLFEEHGSVIWWQREAKDLL 504
>gi|449916111|ref|ZP_21796663.1| isoleucyl-tRNA synthetase [Streptococcus mutans 15JP3]
gi|449935358|ref|ZP_21803319.1| isoleucyl-tRNA synthetase [Streptococcus mutans 2ST1]
gi|449991912|ref|ZP_21822088.1| isoleucyl-tRNA synthetase [Streptococcus mutans NVAB]
gi|450041209|ref|ZP_21837263.1| isoleucyl-tRNA synthetase [Streptococcus mutans T4]
gi|450078233|ref|ZP_21850917.1| isoleucyl-tRNA synthetase [Streptococcus mutans N3209]
gi|450117362|ref|ZP_21864968.1| isoleucyl-tRNA synthetase [Streptococcus mutans ST1]
gi|450152966|ref|ZP_21876929.1| isoleucyl-tRNA synthetase [Streptococcus mutans 21]
gi|449155602|gb|EMB59107.1| isoleucyl-tRNA synthetase [Streptococcus mutans 15JP3]
gi|449166644|gb|EMB69571.1| isoleucyl-tRNA synthetase [Streptococcus mutans 2ST1]
gi|449180383|gb|EMB82541.1| isoleucyl-tRNA synthetase [Streptococcus mutans NVAB]
gi|449197938|gb|EMB99074.1| isoleucyl-tRNA synthetase [Streptococcus mutans T4]
gi|449210282|gb|EMC10752.1| isoleucyl-tRNA synthetase [Streptococcus mutans N3209]
gi|449226361|gb|EMC25903.1| isoleucyl-tRNA synthetase [Streptococcus mutans ST1]
gi|449239437|gb|EMC38159.1| isoleucyl-tRNA synthetase [Streptococcus mutans 21]
Length = 930
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 326/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHVANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFENLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ ++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I + + + PI+PH +EE++S+L + F
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KDI +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGDHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVANLFEEHGSVIWWQREAKDLL 504
>gi|450088526|ref|ZP_21854813.1| isoleucyl-tRNA synthetase [Streptococcus mutans NV1996]
gi|449216437|gb|EMC16555.1| isoleucyl-tRNA synthetase [Streptococcus mutans NV1996]
Length = 930
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 326/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKNGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHVANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFEDLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ ++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I + + + PI+PH +EE++S+L + F
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KDI +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKNGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGDHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVANLFEEHGSVIWWQREAKDLL 504
>gi|449887875|ref|ZP_21787105.1| isoleucyl-tRNA synthetase [Streptococcus mutans SA41]
gi|449252007|gb|EMC50000.1| isoleucyl-tRNA synthetase [Streptococcus mutans SA41]
Length = 930
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 326/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKMRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHVANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFENLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ ++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I + + + PI+PH +EE++S+L + F
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KDI +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGDHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKMRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVANLFEEHGSVIWWQREAKDLL 504
>gi|329769692|ref|ZP_08261095.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
gi|328838300|gb|EGF87911.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
Length = 910
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 225/625 (36%), Positives = 328/625 (52%), Gaps = 67/625 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY+ DH S SIY+ +L + +G +IWTTTPW+LPAN IA +
Sbjct: 192 SALAEAEIEYR-DHTSPSIYVGFELVSEDGVVEKGT---KFVIWTTTPWTLPANLGIAVH 247
Query: 478 PALEYSVASVKGANVIVAK----CLVENLKW-TFQTDIDVVCDFPGQYLQDITYIHPINK 532
P EY V G N ++AK L E W F+ V+ G+ L+ + HP
Sbjct: 248 PDFEYQEVKVNGENYLLAKERVNFLAEQFGWENFELGKTVL----GKELEYLLCQHPF-- 301
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAE-KIPVLNLITNQGKYSPDAGP 591
R ++ A +V+ GTGLVH AP HG DDF++ + K+ VL+ + NQG + +AG
Sbjct: 302 LDRTSTVILADYVTLDSGTGLVHTAPGHGVDDFIVGQGKYKLGVLSPVDNQGNLTEEAGQ 361
Query: 592 GLEGLNILGDGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPVILKASQQWFIDTERIK 650
G + K+ + HL E L EN HSYP+DWR+KKP+I +++ QWF + +
Sbjct: 362 -FAGQFVFDANKNIIAHLAETGALLKQENITHSYPHDWRSKKPIIFRSTPQWFCSVDAFR 420
Query: 651 PEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNEAN 708
E L ++ F E K L + I R W ISRQRVWGVPIPVFY +G+ I+ N
Sbjct: 421 SELLDAVDRTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIPVFYAENGEAILDNTL- 479
Query: 709 IKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH-- 761
I+H + + G + W+ ++LL + N TK DI+D+WFDSG S
Sbjct: 480 IEHVAKIFEVEGSNVWFYKDAKELLPEGYTHPGSPNGEFTKEMDIMDVWFDSGTSHQGCC 539
Query: 762 VLKDK---PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKS 818
++D PA +Y+EG DQ GWF SSL+TSVA+ AP++ + GFV+D G KMSKS
Sbjct: 540 AVRDDLTYPADLYLEGSDQYRGWFNSSLITSVAISGDAPYKELVSAGFVMDGNGNKMSKS 599
Query: 819 VGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDP 878
+GNVIS +D+ K+L G +++R W +A
Sbjct: 600 LGNVISPNDV---GKQL--------------------------GAEIIRLW-SASVDYTQ 629
Query: 879 TVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHS-ESTGSISRY-----VDVYMLKRLCE 932
V I +IL + +KIR++ R+LLG L N S ++ + Y +D YM+ + +
Sbjct: 630 DVRISNDILKQVSETYRKIRNTFRFLLGNLFNGSFDNRTDLLSYDELEELDKYMVLKFEK 689
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ Y +Q+ + L+NF ELS+FY KD LY ++ RLS L L+
Sbjct: 690 VVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIEAEKSHKRLSMLTVLYT 749
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLP 1017
+ +R +API+ AEEVY ++P
Sbjct: 750 VLSKSVRLLAPILSFTAEEVYDNMP 774
Score = 290 bits (743), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 232/397 (58%), Gaps = 13/397 (3%)
Query: 6 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 65
+LY E GKP ++LHDGPPYANG HIGHA+NKILKD ++ + G +YVPGW
Sbjct: 36 DLYRKVLEKNAGKPSYVLHDGPPYANGNIHIGHALNKILKDFIVKYKNMNGFVSNYVPGW 95
Query: 66 DCHGLPIELKAITS--KDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCYH 123
D HGLPIE + + K + R K K++AL+ ++ Q+A+F+ GV+ DWE N Y
Sbjct: 96 DTHGLPIEQVLVNNGVDRKSMPATKFRNKCKDYALKQVDKQRADFKKLGVIGDWE-NPYL 154
Query: 124 TFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLKI 183
T D ++ Q+ F + + YIY+ LKP+YWSPSS +ALAE+E+EY+ DH S SIY+
Sbjct: 155 TLDPKFEAEQIRVFGKMVDKGYIYKGLKPIYWSPSSESALAEAEIEYR-DHTSPSIYVGF 213
Query: 184 KLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGANVIVAKCLVE 243
+L + +G +IWTTTPW+LPAN IA +P EY V G N ++AK V
Sbjct: 214 ELVSEDGVVEKGT---KFVIWTTTPWTLPANLGIAVHPDFEYQEVKVNGENYLLAKERVN 270
Query: 244 SLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHCAPA 302
L F + E+ G+ L+ + HP R ++ A +V+ GTGLVH AP
Sbjct: 271 FLAEQFGWENFELGKTVLGKELEYLLCQHPF--LDRTSTVILADYVTLDSGTGLVHTAPG 328
Query: 303 HGQDDFLLALAE-KIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLWT- 360
HG DDF++ + K+ VL+ + NQG + +AG G + K+ + HL E L
Sbjct: 329 HGVDDFIVGQGKYKLGVLSPVDNQGNLTEEAGQ-FAGQFVFDANKNIIAHLAETGALLKQ 387
Query: 361 ENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
EN HSYP+DWR+KKP+I +++ QWF + + E L
Sbjct: 388 ENITHSYPHDWRSKKPIIFRSTPQWFCSVDAFRSELL 424
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
Query: 1106 LNLITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWT-ENYQHSYPYDWRTKKPV 1164
L+ + NQG + +AG G + K+ + HL E L EN HSYP+DWR+KKP+
Sbjct: 346 LSPVDNQGNLTEEAGQ-FAGQFVFDANKNIIAHLAETGALLKQENITHSYPHDWRSKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +++ QWF + + E L ++ F E K L + I R W ISRQRVWGVPIP
Sbjct: 405 IFRSTPQWFCSVDAFRSELLDAVDRTKFYSEWGKPRLYNMIRDRGDWVISRQRVWGVPIP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
VFY +G+ I+ N I+H + + G + W+ ++LL
Sbjct: 465 VFYAENGEAILDNTL-IEHVAKIFEVEGSNVWFYKDAKELL 504
>gi|449908653|ref|ZP_21793877.1| isoleucyl-tRNA synthetase [Streptococcus mutans OMZ175]
gi|449996500|ref|ZP_21823562.1| isoleucyl-tRNA synthetase [Streptococcus mutans A9]
gi|450100011|ref|ZP_21858583.1| isoleucyl-tRNA synthetase [Streptococcus mutans SF1]
gi|450125351|ref|ZP_21867608.1| isoleucyl-tRNA synthetase [Streptococcus mutans U2A]
gi|449183005|gb|EMB85004.1| isoleucyl-tRNA synthetase [Streptococcus mutans A9]
gi|449220571|gb|EMC20424.1| isoleucyl-tRNA synthetase [Streptococcus mutans SF1]
gi|449232534|gb|EMC31642.1| isoleucyl-tRNA synthetase [Streptococcus mutans U2A]
gi|449262790|gb|EMC60233.1| isoleucyl-tRNA synthetase [Streptococcus mutans OMZ175]
Length = 930
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 326/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHVANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFEDLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
+ ++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVSVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I + + + PI+PH +EE++S+L + F
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KDI +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGDHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVANLFEEHGSVIWWQREAKDLL 504
>gi|392428307|ref|YP_006469318.1| isoleucyl-tRNA synthetase [Streptococcus intermedius JTH08]
gi|419777630|ref|ZP_14303540.1| isoleucine--tRNA ligase [Streptococcus intermedius SK54]
gi|383844654|gb|EID82066.1| isoleucine--tRNA ligase [Streptococcus intermedius SK54]
gi|391757453|dbj|BAM23070.1| isoleucyl-tRNA synthetase [Streptococcus intermedius JTH08]
Length = 930
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 319/617 (51%), Gaps = 54/617 (8%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D +S S+Y K+ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DLVSTSLYYANKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVG 246
Query: 478 PALEYSVASVKGAN--VIVAKCLVENLKWTFQ-TDIDVVCDFPGQYLQDITYIHPINKEQ 534
++Y + G IVA L+ +L F D+ V+ + GQ L I HP + E
Sbjct: 247 ADIDYVLVQPAGETRKFIVASELLNSLSEKFGWIDVQVLATYRGQELNHIVTEHPWDIEV 306
Query: 535 RDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLE 594
+L +L V++ GTG+VH AP G+DD+ + +A + V + +G +AGP E
Sbjct: 307 EELVIL-GDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFE 365
Query: 595 GLNILGDGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 654
G V+ + +L E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 366 G-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Query: 655 ACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFYDGD-TIIVNEANIKHFC 713
+E+V F E K L + I R W ISRQR WGVP+P+FY D T I+ E I+H
Sbjct: 425 DEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTEETIEHVA 484
Query: 714 TLIDEHGPDFWWSLSVEQLLNTSDV-----NSNVTKSNDILDIWFDSGISWSHVLKDKP- 767
L HG WW + LL + N TK DI+D+WFDSG SW+ V+ ++P
Sbjct: 485 ELFAVHGSIVWWQREAKDLLPEGFIHPGSPNGIFTKETDIMDVWFDSGSSWNGVVVNRPE 544
Query: 768 ----AHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMSKSVGNVI 823
A +Y+EG DQ GWF SSL+TSVA AP++ + GF +D KG KMSKS+GN I
Sbjct: 545 LTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTI 604
Query: 824 SAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASKDPTVPIG 883
+ D+ + +G ++LR WV + S + V I
Sbjct: 605 APSDVEK-----------------------------QFGAEILRLWVTSVDSSN-DVRIS 634
Query: 884 KNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCEFQNTMDT 939
+IL+ + +KIR++LR+L+ + + +++ R VD YM R + T+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPKEDTVAYDDLRSVDKYMTVRFNQLIKTIRK 694
Query: 940 LYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHNIFHVLLR 999
Y +F++ + ++NFV +LSAFY KD +Y ++ R ++I + +
Sbjct: 695 AYADFEFLDIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQMQTVFYDILVNITK 754
Query: 1000 TVAPIMPHLAEEVYSHL 1016
+ PI+PH+AEE++S+L
Sbjct: 755 LLTPILPHIAEEIWSYL 771
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 222/398 (55%), Gaps = 12/398 (3%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
++LY ++E GKP F LHDGPPYANG H+GHA+NKI KDI +RS + G Y+PG
Sbjct: 34 AKLYQRRQELNEGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGYYAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + + K +++AL ++ Q+ +F+ GV DWEH Y
Sbjct: 94 WDTHGLPIEQVLAKQGVKRKEMDLAEYLKLCRDYALSQVDKQREDFKRLGVSGDWEH-PY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + K+ YIYR KPVYWS SS +ALAE+E+EY D VS S+Y
Sbjct: 153 VTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYH-DLVSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN--VIVAKC 240
K+ L TD + ++WTTTP+++ A++ + ++Y + G IVA
Sbjct: 212 NKVKDGKGVL---DTDTYIVVWTTTPFTVTASRGLTVGADIDYVLVQPAGETRKFIVASE 268
Query: 241 LVESLKWTFQ-TDIEVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLVHC 299
L+ SL F D++V+ + GQ L I HP + E +L +L V++ GTG+VH
Sbjct: 269 LLNSLSEKFGWIDVQVLATYRGQELNHIVTEHPWDIEVEELVIL-GDHVTTDSGTGIVHT 327
Query: 300 APAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPDVLW 359
AP G+DD+ + +A + V + +G +AGP EG V+ + +L
Sbjct: 328 APGFGEDDYNVGVANGLEVFVTVNERGIMMENAGPDFEG-QFYDKVAPTVIEKLGDLLLA 386
Query: 360 TENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
E HSYP+DWRTKKP+I +A QWF + + E L
Sbjct: 387 QEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEIL 424
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDVLWTENYQHSYPYDWRTKKPVILKA 1168
+ +G +AGP EG + V+ + +L E HSYP+DWRTKKP+I +A
Sbjct: 350 VNERGIMMENAGPDFEG-QFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKPIIWRA 408
Query: 1169 SQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIPVFYD 1228
QWF + + E L +E V F E K L + I R W ISRQR WGVP+P+FY
Sbjct: 409 VPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYA 468
Query: 1229 GD-TIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
D T I+ E I+H L HG WW + LL
Sbjct: 469 EDGTPIMTEETIEHVAELFAVHGSIVWWQREAKDLL 504
>gi|450175240|ref|ZP_21885031.1| isoleucyl-tRNA synthetase [Streptococcus mutans SM1]
gi|449247102|gb|EMC45390.1| isoleucyl-tRNA synthetase [Streptococcus mutans SM1]
Length = 930
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 325/637 (51%), Gaps = 68/637 (10%)
Query: 418 TALAESELEYKPDHISKSIYLKIKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFN 477
+ALAE+E+EY D S S+Y ++ L TD + ++WTTTP+++ A++ +
Sbjct: 191 SALAEAEIEYH-DIDSTSLYYANRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVG 246
Query: 478 PALEYSVASVKGAN----VIVAKCLVENLKWTFQTDI-DVVCDFPGQYLQDITYIHPINK 532
P ++Y V VK AN +VA+ L+ L F D V+ G L I IHP +
Sbjct: 247 PDIDYVV--VKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDD 304
Query: 533 EQRDLKLLPAGFVSSSKGTGLVHCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPG 592
+L ++ V+ GTG+VH AP G+DD+ + + + V+ + +G +AGP
Sbjct: 305 NVEEL-VMNGNHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPD 363
Query: 593 LEGLNILGDGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPVILKASQQWFIDTER 648
EG D+VL V+ + L +E HSYP+DWRTKKP+I +A QWF +
Sbjct: 364 FEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSK 418
Query: 649 IKPEALACLEEVNFVPESAKKTLRDQIAQRPYWCISRQRVWGVPIPVFY--DGDTIIVNE 706
+ + L +++V+F P K L + I R W ISRQR WGVP+P+FY DG I+ E
Sbjct: 419 FRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKE 478
Query: 707 ANIKHFCTLIDEHGPDFWWSLSVEQLL-----NTSDVNSNVTKSNDILDIWFDSGISWSH 761
H L +EHG WW + LL + N TK NDI+D+WFDSG SW+
Sbjct: 479 VT-DHVANLFEEHGSVIWWQREAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNG 537
Query: 762 VLKDK-----PAHVYMEGMDQINGWFMSSLLTSVALKHTAPFRNVFLHGFVVDEKGAKMS 816
VL + PA +Y+EG DQ GWF SSL+TSVA+ AP+++V GFV+D KG KMS
Sbjct: 538 VLNTREDLGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS 597
Query: 817 KSVGNVISAHDITQGAKKLPAYEKSVGNVISAHDITQGAKKLPAYGVDVLRWWVAAHASK 876
KS GN+IS +D+ + YG ++LR WVA+
Sbjct: 598 KSKGNIISPNDVAK-----------------------------QYGAEILRLWVAS-VDT 627
Query: 877 DPTVPIGKNILNSSQDDVQKIRSSLRYLLGVLHNHSESTGSIS----RYVDVYMLKRLCE 932
D V + IL + +KIR++LR+L+ + + I+ R VD YML + +
Sbjct: 628 DSDVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPYINKIAFEDLRSVDKYMLIKFNQ 687
Query: 933 FQNTMDTLYGEFQYARASRVLLNFVVNELSAFYFTLVKDRLYCDSINGEARLSGLHTLHN 992
++ Y + + + ++NFV +LSAFY KD +Y ++ + AR +
Sbjct: 688 LVAVINRAYSHYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE 747
Query: 993 IFHVLLRTVAPIMPHLAEEVYSHLPSRQGTFSSFCHF 1029
I + + + PI+PH +EE++S+L + F
Sbjct: 748 ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEM 784
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 5 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 64
+ +Y+ ++E KP F LHDGPPYANG H+GHA+NKI KD+ +RS + G R Y+PG
Sbjct: 34 ANIYAKRQELNANKPAFFLHDGPPYANGNIHVGHALNKISKDVIIRSKSMSGFRAPYIPG 93
Query: 65 WDCHGLPIE--LKAITSKDKLLSPLDIRKKAKNFALETINTQKAEFESWGVLADWEHNCY 122
WD HGLPIE L K K + D + +AL ++ Q+ +F+ GV DWE N Y
Sbjct: 94 WDTHGLPIEQVLAKKGVKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE-NPY 152
Query: 123 HTFDKEYVKNQLCQFYNLYKQDYIYRDLKPVYWSPSSRTALAESELEYKPDHVSKSIYLK 182
T +Y Q+ F + + YIY KPVYWS SS +ALAE+E+EY D S S+Y
Sbjct: 153 ITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIEYH-DIDSTSLYYA 211
Query: 183 IKLNQVPAHLLEGATDLHALIWTTTPWSLPANQFIAFNPALEYSVASVKGAN----VIVA 238
++ L TD + ++WTTTP+++ A++ + P ++Y V VK AN +VA
Sbjct: 212 NRVKDGKDIL---DTDTYIVVWTTTPFTITASRGLTVGPDIDYVV--VKPANDERKFLVA 266
Query: 239 KCLVESLKWTFQTDI-EVVCDFPGQYLQDITYIHPINKEQRDLKLLPAGFVSSSKGTGLV 297
+ L+ L F D +V+ G L I IHP + +L ++ V+ GTG+V
Sbjct: 267 QALLSELAERFAWDNPQVLATHKGIELDRIVTIHPWDDNVEEL-VMNGNHVTLDSGTGIV 325
Query: 298 HCAPAHGQDDFLLALAEKIPVLNLITNQGKYSPDAGPGLEGLNILGDGKDQVLHLVEPD- 356
H AP G+DD+ + + + V+ + +G +AGP E G D+VL V+
Sbjct: 326 HTAPGFGEDDYNVGVKYGLDVVVTVNERGIMMENAGPDFE-----GQFYDKVLPTVKEKL 380
Query: 357 ---VLWTENYQHSYPYDWRTKKPVILKASQQWFIDTERIKPEAL 397
+L +E HSYP+DWRTKKP+I +A QWF + + + L
Sbjct: 381 GDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFRQDIL 424
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 1109 ITNQGKYSPDAGPGLEGLNILGEGKDQVLHLVEPDV----LWTENYQHSYPYDWRTKKPV 1164
+ +G +AGP EG + D+VL V+ + L +E HSYP+DWRTKKP+
Sbjct: 350 VNERGIMMENAGPDFEG-----QFYDKVLPTVKEKLGDLLLASEVITHSYPFDWRTKKPI 404
Query: 1165 ILKASQQWFIDTERIKPEALACLEGVNFVPESAKKSLRDQIAQRPYWCISRQRVWGVPIP 1224
I +A QWF + + + L ++ V+F P K L + I R W ISRQR WGVP+P
Sbjct: 405 IWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRDRGDWVISRQRAWGVPLP 464
Query: 1225 VFY--DGDTIIVNEANIKHFCTLIDEHGPDFWWSLPVEQLL 1263
+FY DG I+ E H L +EHG WW + LL
Sbjct: 465 IFYAEDGTAIMTKEVT-DHVANLFEEHGSVIWWQREAKDLL 504
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,678,036,130
Number of Sequences: 23463169
Number of extensions: 982099529
Number of successful extensions: 2162345
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16143
Number of HSP's successfully gapped in prelim test: 3753
Number of HSP's that attempted gapping in prelim test: 1953607
Number of HSP's gapped (non-prelim): 107520
length of query: 1281
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1126
effective length of database: 8,722,404,172
effective search space: 9821427097672
effective search space used: 9821427097672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)