BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17128
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42260|GRIK2_RAT Glutamate receptor ionotropic, kainate 2 OS=Rattus norvegicus
GN=Grik2 PE=1 SV=2
Length = 908
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 18 EEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNL 75
E C QL GV A+FGPS + VQSIC AL VPH+++R ++ N F V+L
Sbjct: 90 EASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSL 149
Query: 76 YPSQKLLNAAFKDVIRFLNWTKKLLNAAFKD 106
YP L+ A D+++F W K + + D
Sbjct: 150 YPDFSSLSRAILDLVQFFKW--KTVTVVYDD 178
>sp|P39087|GRIK2_MOUSE Glutamate receptor ionotropic, kainate 2 OS=Mus musculus GN=Grik2
PE=1 SV=4
Length = 908
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 18 EEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNL 75
E C QL GV A+FGPS + VQSIC AL VPH+++R ++ N F V+L
Sbjct: 90 EASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSL 149
Query: 76 YPSQKLLNAAFKDVIRFLNWTKKLLNAAFKD 106
YP L+ A D+++F W K + + D
Sbjct: 150 YPDFSSLSRAILDLVQFFKW--KTVTVVYDD 178
>sp|Q13002|GRIK2_HUMAN Glutamate receptor ionotropic, kainate 2 OS=Homo sapiens GN=GRIK2
PE=1 SV=1
Length = 908
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 18 EEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNL 75
E C QL GV A+FGPS + VQSIC AL VPH+++R ++ N F V+L
Sbjct: 90 EASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSL 149
Query: 76 YPSQKLLNAAFKDVIRFLNWTKKLLNAAFKD 106
YP L+ A D+++F W K + + D
Sbjct: 150 YPDFSSLSRAILDLVQFFKW--KTVTVVYDD 178
>sp|Q38PU3|GRIK2_MACFA Glutamate receptor ionotropic, kainate 2 OS=Macaca fascicularis
GN=GRIK2 PE=2 SV=1
Length = 908
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 18 EEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNL 75
E C QL GV A+FGPS + VQSIC AL VPH+++R ++ N F V+L
Sbjct: 90 EASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSL 149
Query: 76 YPSQKLLNAAFKDVIRFLNWTKKLLNAAFKD 106
YP L+ A D+++F W K + + D
Sbjct: 150 YPDFSSLSRAILDLVQFFKW--KTVTVVYDD 178
>sp|P22756|GRIK1_RAT Glutamate receptor ionotropic, kainate 1 OS=Rattus norvegicus
GN=Grik1 PE=1 SV=3
Length = 949
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 24 CRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDL-ELNSKE-FSVNLYPSQKL 81
C QL GV ALFGPS + VQSIC AL+VPH+++R ++S++ F +NLYP
Sbjct: 97 CDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYINLYPDYAA 156
Query: 82 LNAAFKDVIRFLNWTKKLLNAAFKD 106
++ A D++ + NW K + ++D
Sbjct: 157 ISRAVLDLVLYYNW--KTVTVVYED 179
>sp|P39086|GRIK1_HUMAN Glutamate receptor ionotropic, kainate 1 OS=Homo sapiens GN=GRIK1
PE=1 SV=1
Length = 918
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 18 EEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDL-ELNSKE-FSVNL 75
E C QL GV ALFGPS + VQSIC AL+VPH+++R +++K+ F +NL
Sbjct: 91 EASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYINL 150
Query: 76 YPSQKLLNAAFKDVIRFLNWTKKLLNAAFKD 106
YP ++ A D++ + NW K + ++D
Sbjct: 151 YPDYAAISRAILDLVLYYNW--KTVTVVYED 179
>sp|Q38PU4|GRIK1_MACFA Glutamate receptor ionotropic, kainate 1 OS=Macaca fascicularis
GN=GRIK1 PE=2 SV=1
Length = 918
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 18 EEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNL 75
E C QL GV ALFGPS + VQSIC AL+VPH+++R N F +NL
Sbjct: 91 EASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYINL 150
Query: 76 YPSQKLLNAAFKDVIRFLNWTKKLLNAAFKD 106
YP ++ A D++ + NW K + ++D
Sbjct: 151 YPDYAAISRAILDLVLYYNW--KTVTVVYED 179
>sp|Q13003|GRIK3_HUMAN Glutamate receptor ionotropic, kainate 3 OS=Homo sapiens GN=GRIK3
PE=2 SV=3
Length = 919
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 24 CRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESR-----LDLELNSKEFSVNLYPS 78
C QL GV A+FGPS VQSIC AL+VPH++ R LD N F VNLYP
Sbjct: 99 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD---NKDTFYVNLYPD 155
Query: 79 QKLLNAAFKDVIRFLNW 95
L+ A D++++L W
Sbjct: 156 YASLSHAILDLVQYLKW 172
>sp|Q38PU2|GRIK3_MACFA Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis
GN=GRIK3 PE=2 SV=1
Length = 919
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 24 CRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESR-----LDLELNSKEFSVNLYPS 78
C QL GV A+FGPS VQSIC AL+VPH++ R LD N F VNLYP
Sbjct: 99 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD---NKDTFYVNLYPD 155
Query: 79 QKLLNAAFKDVIRFLNW 95
L+ A D++++L W
Sbjct: 156 YASLSHAILDLVQYLKW 172
>sp|Q60934|GRIK1_MOUSE Glutamate receptor ionotropic, kainate 1 OS=Mus musculus GN=Grik1
PE=2 SV=2
Length = 836
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 18 EEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNL 75
E C QL GV ALFGPS + VQSIC AL+VPH+++R N F +NL
Sbjct: 91 EASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNRDLFYINL 150
Query: 76 YPSQKLLNAAFKDVIRFLNWTKKLLNAAFKD 106
YP ++ A D++ + NW K + ++D
Sbjct: 151 YPDYAAISRAVLDLVLYYNW--KTVTVVYED 179
>sp|B1AS29|GRIK3_MOUSE Glutamate receptor ionotropic, kainate 3 OS=Mus musculus GN=Grik3
PE=2 SV=1
Length = 919
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 24 CRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESR-----LDLELNSKEFSVNLYPS 78
C QL GV A+FGPS VQSIC AL+VPH++ R LD N F VNLYP
Sbjct: 99 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD---NKDTFYVNLYPD 155
Query: 79 QKLLNAAFKDVIRFLNW 95
L+ A D+++ L W
Sbjct: 156 YASLSHAILDLVQSLKW 172
>sp|P42264|GRIK3_RAT Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus
GN=Grik3 PE=1 SV=1
Length = 919
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 24 CRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESR-----LDLELNSKEFSVNLYPS 78
C QL GV A+FGPS VQSIC AL+VPH++ R LD N F VNLYP
Sbjct: 99 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD---NKDTFYVNLYPD 155
Query: 79 QKLLNAAFKDVIRFLNW 95
L+ A D+++ L W
Sbjct: 156 YASLSHAILDLVQSLKW 172
>sp|Q13255|GRM1_HUMAN Metabotropic glutamate receptor 1 OS=Homo sapiens GN=GRM1 PE=1 SV=3
Length = 1194
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 11 NVNTGLEEEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKE 70
+N L + +S+ + + + + GP + + VQ++ + D+P ++
Sbjct: 136 GINRCLPDGQSLPPGRTKKPIAGVIGPGSSSVAIQVQNLLQLFDIP--------QIAYSA 187
Query: 71 FSVNLYPSQKLLNAAFKDVIRFLNWTKKLLNAAFKDVIRFLNWTKVAIVYEEDN 124
S++L S K L F V+ + L A D+++ NWT V+ V+ E N
Sbjct: 188 TSIDL--SDKTLYKYFLRVVP----SDTLQARAMLDIVKRYNWTYVSAVHTEGN 235
>sp|P26591|GLRK_LYMST Glutamate receptor OS=Lymnaea stagnalis PE=2 SV=1
Length = 917
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 20/103 (19%)
Query: 21 SVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQK 80
+ +C L G A+FG S+A +QS + +VP + + + NS S +Y
Sbjct: 77 NALCHHLSRGDLAIFGVSNASSLATIQSYTDTFNVPFVTISM-AQNNSHNGSYQIYMRPM 135
Query: 81 LLNAAFKDVIRFLNWTKKLLNAAFKDVIRFLNWTKVAIVYEED 123
+NA DVI W KVA Y+ D
Sbjct: 136 YINA-------------------LVDVIVHYRWEKVAFYYDSD 159
>sp|P23385|GRM1_RAT Metabotropic glutamate receptor 1 OS=Rattus norvegicus GN=Grm1 PE=1
SV=1
Length = 1199
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 11 NVNTGLEEEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKE 70
+N L + +++ + + + + GP + + VQ++ + D+P ++
Sbjct: 136 GLNRCLPDGQTLPPGRTKKPIAGVIGPGSSSVAIQVQNLLQLFDIP--------QIAYSA 187
Query: 71 FSVNLYPSQKLLNAAFKDVIRFLNWTKKLLNAAFKDVIRFLNWTKVAIVYEEDN 124
S++L S K L F V+ + L A D+++ NWT V+ V+ E N
Sbjct: 188 TSIDL--SDKTLYKYFLRVVP----SDTLQARAMLDIVKRYNWTYVSAVHTEGN 235
>sp|P97772|GRM1_MOUSE Metabotropic glutamate receptor 1 OS=Mus musculus GN=Grm1 PE=2 SV=2
Length = 1199
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 11 NVNTGLEEEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKE 70
+N L + +++ + + + + GP + + VQ++ + D+P ++
Sbjct: 136 GLNRCLPDGQTLPPGRTKKPIAGVIGPGSSSVAIQVQNLLQLFDIP--------QIAYSA 187
Query: 71 FSVNLYPSQKLLNAAFKDVIRFLNWTKKLLNAAFKDVIRFLNWTKVAIVYEEDN 124
S++L S K L F V+ + L A D+++ NWT V+ V+ E N
Sbjct: 188 TSIDL--SDKTLYKYFLRVVP----SDTLQARAMLDIVKRYNWTYVSAVHTEGN 235
>sp|Q11I86|PDXJ_MESSB Pyridoxine 5'-phosphate synthase OS=Mesorhizobium sp. (strain
BNC1) GN=pdxJ PE=3 SV=1
Length = 248
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 54 DVPHMESRLDLELNSKEFSVNLYPSQKLLN 83
D+PH+ + +D E +EF++ YPS+ L
Sbjct: 56 DLPHIRALIDDEFPDREFNIEGYPSEDFLR 85
>sp|Q5IS46|GRIK4_PANTR Glutamate receptor ionotropic, kainate 4 OS=Pan troglodytes
GN=GRIK4 PE=2 SV=1
Length = 956
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 8 VEVNVNTGLEEEE----SVMCRQLQNGVQALFG-PSDALLGPHVQSICEALDVPHMESRL 62
VEV++ L + E MC+ L GV A+ G S + +IC +VPH +
Sbjct: 64 VEVDIFELLRDSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAP 123
Query: 63 D--LELNSKEF-SVNLYPSQKLLNAAFKDVIRFLNWTKKLLNAA 103
+ ++ + F ++NL+PS ++ A ++ F N T L A
Sbjct: 124 EEFVKFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICA 167
>sp|Q16099|GRIK4_HUMAN Glutamate receptor ionotropic, kainate 4 OS=Homo sapiens GN=GRIK4
PE=2 SV=2
Length = 956
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 8 VEVNVNTGLEEEE----SVMCRQLQNGVQALFG-PSDALLGPHVQSICEALDVPHMESRL 62
VEV++ L + E MC+ L GV A+ G S + +IC +VPH +
Sbjct: 64 VEVDIFELLRDSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAP 123
Query: 63 D--LELNSKEF-SVNLYPSQKLLNAAFKDVIRFLNWTKKLLNAA 103
+ ++ + F ++NL+PS ++ A ++ F N T L A
Sbjct: 124 EEFVKFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICA 167
>sp|A6QT51|SFH5_AJECN Phosphatidylinositol transfer protein SFH5 OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=SFH5 PE=3 SV=1
Length = 460
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 71 FSVNLYPSQKLLNAAFKDVIRFLNWTKKLLNAAFKDV 107
F+ N+Y S K N F DV F+ W L+ A KD+
Sbjct: 224 FTWNIYGSVKDANRTFGDVDEFIKWRVALMEMAVKDL 260
>sp|Q8K9W5|PTA_BUCAP Phosphate acetyltransferase OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=pta PE=3 SV=1
Length = 709
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 85 AFKDVIRFLNWTKKLLNAAFKDVIRFLNWTKVAIVYEED 123
+F VI F+ W KKL+ ++ ++ +FLN T V + +D
Sbjct: 209 SFFRVIAFIPWNKKLVKSSVINIFKFLNATLVNTISIKD 247
>sp|Q84MS4|HAK27_ORYSJ Potassium transporter 27 OS=Oryza sativa subsp. japonica GN=HAK27
PE=2 SV=1
Length = 811
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 16 LEEEESVMCRQLQNGVQALFGPSDALLGPH 45
+++E+ + R+++NGV + G SD + PH
Sbjct: 739 VQQEQQAILREMENGVVYILGESDIVASPH 768
>sp|Q8BMF5|GRIK4_MOUSE Glutamate receptor ionotropic, kainate 4 OS=Mus musculus GN=Grik4
PE=2 SV=2
Length = 956
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 8 VEVNVNTGLEEEE----SVMCRQLQNGVQALFG-PSDALLGPHVQSICEALDVPHMESRL 62
VEV++ L + E MC+ L GV A+ G S + +IC +VPH +
Sbjct: 64 VEVDIFELLRDSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAP 123
Query: 63 D--LELNSKEF-SVNLYPSQKLLNAAFKDVIRFLNWTKKLLNAA 103
+ + + F ++NL+PS ++ A ++ F N T L A
Sbjct: 124 EEFVRFQLQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICA 167
>sp|Q01812|GRIK4_RAT Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus
GN=Grik4 PE=2 SV=1
Length = 956
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 8 VEVNVNTGLEEEE----SVMCRQLQNGVQALFG-PSDALLGPHVQSICEALDVPHMESRL 62
VEV++ L + E MC+ L GV A+ G S + +IC +VPH +
Sbjct: 64 VEVDIFELLRDSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAP 123
Query: 63 D--LELNSKEF-SVNLYPSQKLLNAAFKDVIRFLNWTKKLLNAA 103
+ + + F ++NL+PS ++ A ++ F N T L A
Sbjct: 124 EEFVRFQLQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICA 167
>sp|P54485|YQGB_BACSU Uncharacterized protein YqgB OS=Bacillus subtilis (strain 168)
GN=yqgB PE=4 SV=2
Length = 255
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 13 NTGLEEEESVMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFS 72
N L+ +E NG +F P+D+ +++ A+ + + L ++ ++E S
Sbjct: 73 NGKLQTDEKKATESQANGFVIVFDPTDSYGTEQIEAKQNAIGILQNKFVLAIDGQAQEMS 132
Query: 73 VNLYPS--QKLLNAAFKDVIRFLNWTKKLL 100
++ PS QK KDVI LN K ++
Sbjct: 133 YSMMPSELQK------KDVIAGLNQNKAMI 156
>sp|Q43068|C82A1_PEA Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2
SV=2
Length = 544
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 31 VQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNS---KEFSVNLYPSQKL--LNAA 85
++ + G SD G ++C L PH+ +L ELN+ KE VN KL L+A
Sbjct: 335 LELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAI 394
Query: 86 FKDVIRF 92
K+ +R
Sbjct: 395 IKETLRL 401
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,784,225
Number of Sequences: 539616
Number of extensions: 1572890
Number of successful extensions: 4447
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4391
Number of HSP's gapped (non-prelim): 46
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)