Query psy17133
Match_columns 116
No_of_seqs 180 out of 1890
Neff 12.1
Searched_HMMs 46136
Date Fri Aug 16 22:44:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17133.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17133hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0263|consensus 99.9 3.7E-26 7.9E-31 142.5 10.9 108 2-116 533-640 (707)
2 KOG0263|consensus 99.9 7.8E-26 1.7E-30 141.1 12.2 115 1-116 448-598 (707)
3 KOG0271|consensus 99.9 3.6E-25 7.9E-30 129.9 10.2 108 2-116 113-226 (480)
4 KOG0272|consensus 99.9 6.9E-25 1.5E-29 129.6 9.9 107 3-116 302-409 (459)
5 KOG0271|consensus 99.9 1.2E-24 2.7E-29 127.7 10.2 109 1-116 364-472 (480)
6 KOG0272|consensus 99.9 2.8E-25 6E-30 131.2 7.3 108 2-116 259-366 (459)
7 KOG0266|consensus 99.9 1.7E-23 3.7E-28 129.5 14.9 107 3-116 202-309 (456)
8 KOG0284|consensus 99.9 2.3E-24 5.1E-29 127.1 8.4 107 3-116 179-285 (464)
9 PTZ00421 coronin; Provisional 99.9 1.9E-22 4.2E-27 125.3 16.1 108 3-116 74-189 (493)
10 KOG0286|consensus 99.9 1.2E-22 2.6E-27 115.8 12.5 108 1-116 142-250 (343)
11 KOG0279|consensus 99.9 2.2E-22 4.8E-27 114.0 12.3 113 3-116 62-213 (315)
12 KOG0291|consensus 99.9 5.1E-22 1.1E-26 124.6 13.0 107 3-116 349-499 (893)
13 KOG0266|consensus 99.9 3.6E-21 7.8E-26 119.3 14.6 108 2-116 244-355 (456)
14 KOG0286|consensus 99.9 8.4E-21 1.8E-25 108.4 13.2 110 2-116 227-336 (343)
15 KOG0273|consensus 99.9 3.7E-21 8E-26 115.4 12.3 108 2-116 357-473 (524)
16 PTZ00420 coronin; Provisional 99.9 2.7E-20 5.9E-25 116.9 16.5 108 2-116 72-188 (568)
17 KOG0316|consensus 99.9 9.3E-21 2E-25 105.7 11.5 107 3-116 16-122 (307)
18 KOG0319|consensus 99.9 8.3E-21 1.8E-25 118.7 12.4 108 2-116 461-568 (775)
19 KOG0279|consensus 99.9 2.3E-20 5E-25 105.9 12.9 109 2-116 13-126 (315)
20 KOG0285|consensus 99.9 3.1E-21 6.6E-26 112.9 9.6 108 2-116 149-256 (460)
21 KOG0315|consensus 99.9 9.9E-20 2.2E-24 102.3 13.6 113 3-116 82-279 (311)
22 PTZ00421 coronin; Provisional 99.9 2.5E-19 5.4E-24 111.6 16.2 106 3-114 124-230 (493)
23 KOG0645|consensus 99.9 2.5E-19 5.4E-24 101.5 14.6 109 2-116 12-126 (312)
24 KOG0302|consensus 99.9 3.5E-20 7.5E-25 108.9 11.3 110 1-116 254-369 (440)
25 KOG1407|consensus 99.8 3E-20 6.5E-25 104.8 10.2 114 3-116 63-252 (313)
26 KOG0276|consensus 99.8 9.2E-21 2E-25 117.3 8.6 108 3-116 139-248 (794)
27 KOG0295|consensus 99.8 1.7E-19 3.7E-24 105.5 13.3 108 3-116 276-397 (406)
28 KOG0318|consensus 99.8 1.4E-19 3E-24 110.1 13.2 110 3-116 189-341 (603)
29 KOG0283|consensus 99.8 1.7E-20 3.7E-25 118.2 9.4 112 2-116 265-431 (712)
30 KOG0292|consensus 99.8 5.3E-20 1.1E-24 117.7 11.6 108 2-116 49-156 (1202)
31 KOG0319|consensus 99.8 6.2E-20 1.3E-24 114.9 11.0 108 2-116 503-610 (775)
32 KOG0303|consensus 99.8 4.6E-20 9.9E-25 109.0 9.8 108 2-116 79-194 (472)
33 KOG0285|consensus 99.8 1.1E-19 2.5E-24 106.5 11.0 107 3-116 234-340 (460)
34 KOG0645|consensus 99.8 6.9E-19 1.5E-23 99.7 13.7 108 2-116 59-171 (312)
35 KOG0973|consensus 99.8 1.8E-19 3.9E-24 116.2 12.0 107 3-116 68-192 (942)
36 KOG0295|consensus 99.8 9.6E-19 2.1E-23 102.4 13.6 113 3-116 192-355 (406)
37 KOG0643|consensus 99.8 5.1E-19 1.1E-23 100.3 12.0 115 1-116 49-211 (327)
38 KOG0284|consensus 99.8 3.1E-20 6.8E-25 109.9 7.0 107 3-116 137-243 (464)
39 KOG0275|consensus 99.8 5E-21 1.1E-25 111.3 3.6 109 1-116 260-369 (508)
40 PTZ00420 coronin; Provisional 99.8 3.1E-18 6.6E-23 107.9 16.2 107 3-116 124-235 (568)
41 KOG0283|consensus 99.8 2.3E-19 5E-24 113.2 10.9 106 1-116 366-472 (712)
42 KOG0273|consensus 99.8 1.3E-18 2.8E-23 104.7 12.2 106 3-116 234-380 (524)
43 KOG0282|consensus 99.8 8E-20 1.7E-24 109.9 6.2 108 1-116 255-363 (503)
44 KOG0289|consensus 99.8 4E-18 8.6E-23 101.9 13.0 110 2-116 301-410 (506)
45 cd00200 WD40 WD40 domain, foun 99.8 1.4E-17 3.1E-22 96.5 15.2 107 2-115 7-113 (289)
46 KOG0289|consensus 99.8 2E-18 4.3E-23 103.2 11.3 103 7-116 350-453 (506)
47 KOG0269|consensus 99.8 4.6E-19 1E-23 111.7 8.7 108 3-116 132-241 (839)
48 cd00200 WD40 WD40 domain, foun 99.8 1.3E-17 2.9E-22 96.6 14.3 107 3-116 176-282 (289)
49 KOG0278|consensus 99.8 8.8E-18 1.9E-22 94.8 12.6 114 2-116 141-288 (334)
50 KOG0318|consensus 99.8 7.1E-18 1.5E-22 102.8 13.0 109 2-116 145-256 (603)
51 KOG0647|consensus 99.8 3.6E-18 7.7E-23 98.1 11.0 107 3-116 26-136 (347)
52 KOG0293|consensus 99.8 1.6E-18 3.5E-23 103.2 9.7 107 3-116 223-333 (519)
53 KOG0265|consensus 99.8 7.9E-18 1.7E-22 96.6 11.9 108 2-116 45-154 (338)
54 KOG0282|consensus 99.8 5E-19 1.1E-23 106.5 7.4 108 2-116 212-321 (503)
55 KOG0276|consensus 99.8 5.6E-18 1.2E-22 105.2 12.0 106 4-116 55-162 (794)
56 PF08662 eIF2A: Eukaryotic tra 99.8 3.8E-17 8.2E-22 91.4 14.2 100 3-114 58-162 (194)
57 KOG0643|consensus 99.8 2.8E-17 6E-22 93.3 13.6 106 1-114 7-112 (327)
58 KOG0265|consensus 99.8 7.6E-18 1.6E-22 96.7 11.2 114 2-116 88-237 (338)
59 KOG0296|consensus 99.8 3E-17 6.5E-22 96.3 13.6 108 2-116 62-169 (399)
60 PLN00181 protein SPA1-RELATED; 99.8 5.4E-17 1.2E-21 106.6 16.2 106 4-116 532-639 (793)
61 KOG0275|consensus 99.8 2.2E-19 4.7E-24 104.6 3.8 112 4-116 213-327 (508)
62 KOG0292|consensus 99.8 2.1E-18 4.5E-23 110.6 8.1 106 4-116 9-114 (1202)
63 KOG0264|consensus 99.8 9.2E-18 2E-22 100.2 10.1 108 3-116 226-338 (422)
64 KOG1539|consensus 99.8 7.4E-17 1.6E-21 102.7 14.4 113 2-116 491-638 (910)
65 KOG1445|consensus 99.8 1.5E-18 3.2E-23 108.4 6.7 108 3-116 626-741 (1012)
66 KOG0264|consensus 99.8 3.6E-17 7.9E-22 97.7 11.8 109 2-116 270-395 (422)
67 PLN00181 protein SPA1-RELATED; 99.8 1.6E-16 3.5E-21 104.4 15.9 107 2-116 573-681 (793)
68 KOG0294|consensus 99.8 5.2E-17 1.1E-21 93.9 11.7 106 2-115 81-188 (362)
69 KOG0291|consensus 99.8 5.7E-17 1.2E-21 102.5 12.8 105 5-116 308-413 (893)
70 KOG0281|consensus 99.8 5.7E-18 1.2E-22 99.4 7.7 109 1-116 234-379 (499)
71 KOG0277|consensus 99.8 6.5E-17 1.4E-21 91.3 11.3 108 3-116 103-212 (311)
72 KOG1407|consensus 99.8 5E-17 1.1E-21 92.0 10.8 106 3-116 188-293 (313)
73 KOG0296|consensus 99.8 1.6E-16 3.4E-21 93.3 13.0 108 2-116 104-211 (399)
74 KOG2394|consensus 99.7 1.2E-17 2.5E-22 102.2 8.4 95 4-105 290-384 (636)
75 KOG0294|consensus 99.7 9.1E-17 2E-21 92.9 11.5 105 3-116 42-148 (362)
76 KOG0641|consensus 99.7 2.5E-16 5.5E-21 88.1 12.7 112 3-116 182-294 (350)
77 KOG1273|consensus 99.7 6.2E-17 1.3E-21 93.9 10.6 95 6-108 25-119 (405)
78 KOG0305|consensus 99.7 1.6E-16 3.5E-21 97.7 12.8 108 2-116 341-452 (484)
79 KOG0772|consensus 99.7 1.3E-17 2.7E-22 101.8 7.9 114 2-116 266-385 (641)
80 KOG0305|consensus 99.7 5.6E-17 1.2E-21 99.7 10.7 111 4-115 217-364 (484)
81 KOG0973|consensus 99.7 4.9E-17 1.1E-21 105.3 10.7 105 2-113 127-237 (942)
82 KOG0267|consensus 99.7 3.6E-18 7.8E-23 107.3 5.4 108 2-116 68-175 (825)
83 KOG0277|consensus 99.7 7.8E-17 1.7E-21 91.0 9.9 106 5-116 61-169 (311)
84 KOG0315|consensus 99.7 1.7E-16 3.7E-21 89.5 11.1 95 3-104 214-309 (311)
85 KOG0310|consensus 99.7 6.4E-16 1.4E-20 93.4 13.2 106 3-115 109-216 (487)
86 KOG0308|consensus 99.7 4.5E-16 9.8E-21 97.1 12.4 107 3-116 170-276 (735)
87 KOG2394|consensus 99.7 9E-17 1.9E-21 98.5 8.9 112 5-116 220-353 (636)
88 KOG0293|consensus 99.7 1.1E-16 2.4E-21 95.6 8.6 109 3-116 394-504 (519)
89 KOG0306|consensus 99.7 1.4E-16 3.1E-21 100.7 9.5 107 3-116 549-655 (888)
90 KOG0288|consensus 99.7 6.7E-16 1.4E-20 92.0 11.7 112 2-116 339-452 (459)
91 KOG0316|consensus 99.7 4.5E-16 9.7E-21 87.3 10.4 107 3-116 58-204 (307)
92 KOG1009|consensus 99.7 1.1E-16 2.3E-21 95.0 8.4 107 3-116 64-186 (434)
93 KOG0310|consensus 99.7 5.4E-16 1.2E-20 93.7 11.5 107 2-116 151-259 (487)
94 KOG0274|consensus 99.7 1.9E-15 4E-20 95.1 14.3 111 2-116 247-391 (537)
95 KOG0313|consensus 99.7 3.6E-16 7.7E-21 92.3 10.4 106 2-116 258-367 (423)
96 KOG0639|consensus 99.7 8.9E-17 1.9E-21 98.2 7.9 103 7-116 512-654 (705)
97 KOG0640|consensus 99.7 2.4E-16 5.3E-21 91.4 9.1 109 3-116 171-282 (430)
98 KOG1446|consensus 99.7 2.5E-15 5.5E-20 86.7 12.8 108 4-115 187-295 (311)
99 KOG0281|consensus 99.7 2.7E-17 5.9E-22 96.6 4.6 102 2-116 318-419 (499)
100 KOG0640|consensus 99.7 3.6E-16 7.8E-21 90.8 9.0 109 4-116 216-326 (430)
101 KOG0306|consensus 99.7 1.4E-15 3E-20 96.4 11.1 106 4-116 508-613 (888)
102 KOG1034|consensus 99.7 4E-15 8.6E-20 86.7 11.1 107 4-116 89-202 (385)
103 KOG0322|consensus 99.7 3.3E-16 7.1E-21 88.9 6.5 109 1-116 202-314 (323)
104 KOG1274|consensus 99.7 5.8E-15 1.3E-19 95.0 12.7 114 2-116 136-253 (933)
105 KOG2110|consensus 99.7 2.1E-14 4.6E-19 84.6 14.0 103 6-115 131-238 (391)
106 KOG1408|consensus 99.7 2.6E-15 5.6E-20 95.2 10.8 108 5-116 597-704 (1080)
107 KOG0313|consensus 99.7 4.8E-15 1E-19 87.7 10.7 105 4-116 300-409 (423)
108 KOG1446|consensus 99.6 3.8E-14 8.3E-19 81.9 13.7 106 4-116 14-121 (311)
109 KOG0308|consensus 99.6 6.5E-15 1.4E-19 92.1 11.3 113 3-116 116-234 (735)
110 KOG0303|consensus 99.6 4.2E-15 9.2E-20 88.4 9.7 105 2-113 129-234 (472)
111 KOG0299|consensus 99.6 1.7E-15 3.8E-20 91.1 7.3 107 3-116 201-307 (479)
112 KOG0267|consensus 99.6 7.7E-16 1.7E-20 97.1 6.0 109 1-116 109-217 (825)
113 KOG0270|consensus 99.6 3.9E-15 8.4E-20 89.3 8.7 76 2-83 241-317 (463)
114 KOG0772|consensus 99.6 1.1E-15 2.3E-20 93.6 6.2 104 6-114 319-428 (641)
115 KOG0299|consensus 99.6 1.6E-14 3.4E-19 87.1 10.4 114 2-116 140-265 (479)
116 KOG2096|consensus 99.6 1.7E-14 3.6E-19 84.2 10.2 111 2-114 84-247 (420)
117 KOG0639|consensus 99.6 6.5E-15 1.4E-19 90.2 8.5 106 4-116 465-572 (705)
118 KOG1007|consensus 99.6 6.5E-15 1.4E-19 84.8 7.8 105 6-116 172-280 (370)
119 KOG0269|consensus 99.6 6.2E-15 1.3E-19 93.6 7.9 104 4-113 176-282 (839)
120 KOG0268|consensus 99.6 3.7E-15 8E-20 87.9 6.3 105 5-116 188-293 (433)
121 KOG1063|consensus 99.6 2.1E-14 4.7E-19 90.3 9.6 107 3-116 524-639 (764)
122 KOG1009|consensus 99.6 4E-14 8.6E-19 84.4 9.8 113 4-116 13-144 (434)
123 KOG0646|consensus 99.6 3.4E-14 7.3E-19 85.8 9.6 106 4-116 81-197 (476)
124 KOG2055|consensus 99.6 2.6E-14 5.7E-19 86.4 8.3 108 2-115 342-455 (514)
125 KOG0771|consensus 99.6 1E-13 2.3E-18 82.7 10.7 112 2-115 184-344 (398)
126 KOG1445|consensus 99.6 1.4E-14 3E-19 91.1 7.2 109 2-116 675-785 (1012)
127 KOG0300|consensus 99.6 3.6E-14 7.7E-19 83.0 8.3 106 3-116 271-377 (481)
128 KOG0278|consensus 99.6 1.2E-14 2.7E-19 82.3 6.2 102 4-113 100-202 (334)
129 KOG4283|consensus 99.6 1.5E-13 3.3E-18 79.6 10.7 105 5-116 102-210 (397)
130 KOG0647|consensus 99.6 3E-13 6.4E-18 78.3 11.4 83 2-92 70-154 (347)
131 KOG1539|consensus 99.6 1.5E-13 3.2E-18 88.1 11.1 105 5-116 449-597 (910)
132 KOG2048|consensus 99.6 1.5E-13 3.2E-18 86.3 10.7 113 2-116 152-266 (691)
133 KOG0646|consensus 99.5 6.4E-13 1.4E-17 80.4 12.6 107 2-116 121-238 (476)
134 KOG1036|consensus 99.5 3.9E-13 8.4E-18 77.8 11.2 104 3-116 12-115 (323)
135 KOG1273|consensus 99.5 8.2E-13 1.8E-17 77.1 12.6 113 3-116 64-217 (405)
136 KOG1538|consensus 99.5 6.9E-14 1.5E-18 88.5 8.6 101 5-115 13-113 (1081)
137 KOG1034|consensus 99.5 8.1E-14 1.8E-18 81.4 8.2 81 2-85 133-213 (385)
138 TIGR03866 PQQ_ABC_repeats PQQ- 99.5 2.8E-12 6E-17 75.7 14.9 102 5-115 31-134 (300)
139 KOG0649|consensus 99.5 5.8E-13 1.3E-17 75.4 11.2 81 5-92 115-195 (325)
140 KOG0302|consensus 99.5 2.8E-13 6.2E-18 80.4 10.3 106 3-115 301-429 (440)
141 KOG1332|consensus 99.5 1.6E-13 3.6E-18 77.4 8.9 109 2-116 54-184 (299)
142 KOG1007|consensus 99.5 2.6E-13 5.7E-18 78.3 9.9 108 3-116 213-352 (370)
143 KOG2919|consensus 99.5 8.5E-14 1.8E-18 81.3 7.9 109 3-115 249-360 (406)
144 KOG1310|consensus 99.5 1.1E-13 2.4E-18 85.8 8.6 108 2-116 48-169 (758)
145 KOG0301|consensus 99.5 2.7E-13 5.9E-18 85.4 10.5 103 2-116 138-240 (745)
146 KOG0641|consensus 99.5 9.2E-13 2E-17 74.1 11.5 105 4-116 231-340 (350)
147 KOG0290|consensus 99.5 6.1E-13 1.3E-17 76.9 10.7 108 3-116 149-309 (364)
148 KOG0268|consensus 99.5 2.7E-14 5.8E-19 84.3 5.4 104 6-116 231-336 (433)
149 KOG1332|consensus 99.5 1.3E-13 2.7E-18 77.9 7.8 105 5-116 12-125 (299)
150 KOG1274|consensus 99.5 6.7E-13 1.4E-17 85.8 11.6 104 4-114 96-207 (933)
151 KOG4283|consensus 99.5 2.4E-13 5.1E-18 78.8 8.4 108 3-116 142-267 (397)
152 KOG0288|consensus 99.5 1.1E-14 2.4E-19 87.0 3.1 108 2-116 173-282 (459)
153 KOG1524|consensus 99.5 2.1E-13 4.5E-18 84.3 8.6 109 3-114 103-245 (737)
154 KOG1036|consensus 99.5 5.6E-13 1.2E-17 77.2 9.7 108 6-114 179-293 (323)
155 KOG2111|consensus 99.5 4.5E-12 9.6E-17 73.9 13.2 87 23-115 155-246 (346)
156 KOG0644|consensus 99.5 1.1E-14 2.3E-19 93.6 2.5 98 2-106 188-285 (1113)
157 KOG2096|consensus 99.5 1.3E-12 2.7E-17 76.5 10.4 103 6-116 189-299 (420)
158 KOG0274|consensus 99.5 3.4E-13 7.3E-18 85.2 8.8 102 3-116 330-432 (537)
159 KOG2048|consensus 99.5 7.2E-12 1.5E-16 79.0 14.3 106 3-116 68-175 (691)
160 KOG2139|consensus 99.5 3.9E-12 8.4E-17 75.5 12.1 102 4-113 195-298 (445)
161 KOG0771|consensus 99.5 6.6E-13 1.4E-17 79.4 9.0 70 8-85 148-217 (398)
162 KOG0301|consensus 99.5 4.7E-12 1E-16 80.1 12.9 102 2-114 177-278 (745)
163 KOG4328|consensus 99.5 2.5E-13 5.4E-18 82.2 6.9 115 2-116 232-390 (498)
164 KOG0307|consensus 99.5 1.4E-13 3.1E-18 90.3 6.3 111 2-116 114-228 (1049)
165 KOG2106|consensus 99.5 5.1E-12 1.1E-16 77.7 12.5 102 3-116 367-468 (626)
166 KOG0270|consensus 99.5 3.1E-13 6.7E-18 81.4 7.1 112 5-116 174-308 (463)
167 KOG2111|consensus 99.5 3.8E-11 8.2E-16 70.1 15.1 78 2-84 179-257 (346)
168 KOG4227|consensus 99.4 4.7E-12 1E-16 76.2 10.7 109 2-116 54-170 (609)
169 KOG2055|consensus 99.4 7.9E-12 1.7E-16 76.0 11.4 102 6-115 305-407 (514)
170 KOG0650|consensus 99.4 1.7E-11 3.7E-16 76.8 12.7 105 2-115 398-541 (733)
171 KOG2445|consensus 99.4 4.4E-11 9.5E-16 69.7 13.0 107 3-116 12-135 (361)
172 KOG0300|consensus 99.4 3E-12 6.4E-17 75.2 8.3 66 51-116 270-335 (481)
173 KOG0321|consensus 99.4 2.1E-12 4.7E-17 81.0 8.1 77 1-84 97-176 (720)
174 KOG0290|consensus 99.4 2.6E-11 5.7E-16 70.3 11.7 112 2-114 194-355 (364)
175 KOG3881|consensus 99.4 1.4E-11 2.9E-16 73.6 10.6 104 6-116 204-311 (412)
176 KOG4378|consensus 99.4 8.4E-12 1.8E-16 76.8 9.9 103 6-115 166-270 (673)
177 TIGR03866 PQQ_ABC_repeats PQQ- 99.4 5.3E-11 1.1E-15 70.3 13.2 89 18-114 2-91 (300)
178 KOG4378|consensus 99.4 1.5E-11 3.2E-16 75.8 10.9 98 3-107 207-305 (673)
179 KOG1272|consensus 99.4 3.1E-13 6.7E-18 82.1 3.5 106 4-116 209-314 (545)
180 KOG2110|consensus 99.4 4.1E-11 8.9E-16 71.1 12.2 105 4-115 87-193 (391)
181 KOG1188|consensus 99.4 1.1E-11 2.4E-16 72.9 9.6 109 3-116 69-187 (376)
182 KOG1408|consensus 99.4 2.3E-11 4.9E-16 77.9 11.2 62 55-116 598-662 (1080)
183 PF08662 eIF2A: Eukaryotic tra 99.4 3.9E-11 8.5E-16 67.3 11.2 79 3-91 99-186 (194)
184 KOG2106|consensus 99.4 1.1E-10 2.4E-15 72.0 13.6 104 4-116 407-512 (626)
185 KOG0642|consensus 99.4 7.4E-12 1.6E-16 77.5 8.5 107 3-116 293-417 (577)
186 KOG4547|consensus 99.4 6.1E-11 1.3E-15 73.7 12.1 102 2-112 100-206 (541)
187 KOG1963|consensus 99.4 5.3E-11 1.2E-15 76.8 11.9 106 3-116 204-313 (792)
188 KOG1272|consensus 99.3 3.8E-12 8.3E-17 77.5 6.3 99 5-111 252-350 (545)
189 PRK01742 tolB translocation pr 99.3 9.1E-11 2E-15 73.0 12.5 102 4-114 203-310 (429)
190 KOG0307|consensus 99.3 7E-12 1.5E-16 82.7 7.3 102 7-114 209-316 (1049)
191 KOG0974|consensus 99.3 6E-11 1.3E-15 77.8 11.2 105 2-116 173-279 (967)
192 COG2319 FOG: WD40 repeat [Gene 99.3 3.6E-10 7.8E-15 68.6 14.2 107 2-116 153-262 (466)
193 KOG2919|consensus 99.3 3.1E-11 6.6E-16 70.9 8.8 107 4-116 207-318 (406)
194 KOG4328|consensus 99.3 4.7E-11 1E-15 72.6 9.4 107 2-114 320-439 (498)
195 KOG1523|consensus 99.3 9.2E-11 2E-15 68.7 10.2 105 4-115 10-120 (361)
196 KOG1523|consensus 99.3 3.9E-11 8.5E-16 70.2 8.7 107 3-116 54-167 (361)
197 KOG0322|consensus 99.3 8.9E-12 1.9E-16 71.3 5.5 70 6-82 253-322 (323)
198 KOG1063|consensus 99.3 2.2E-10 4.9E-15 72.8 11.7 114 1-116 264-382 (764)
199 KOG2445|consensus 99.3 5.6E-10 1.2E-14 65.3 11.8 107 3-116 168-309 (361)
200 KOG0642|consensus 99.3 1.2E-10 2.7E-15 72.3 9.7 113 2-116 394-552 (577)
201 KOG2315|consensus 99.3 4.2E-10 9.2E-15 70.0 11.9 100 3-114 269-373 (566)
202 PRK05137 tolB translocation pr 99.3 9.2E-10 2E-14 68.8 13.6 103 3-114 200-308 (435)
203 KOG0321|consensus 99.3 4.7E-11 1E-15 75.2 7.5 103 8-116 53-166 (720)
204 KOG0974|consensus 99.2 2.1E-10 4.6E-15 75.3 10.5 96 12-116 141-237 (967)
205 PRK03629 tolB translocation pr 99.2 1.2E-09 2.6E-14 68.1 13.5 102 5-115 199-306 (429)
206 COG2319 FOG: WD40 repeat [Gene 99.2 3.3E-09 7.1E-14 64.4 14.7 106 3-116 197-305 (466)
207 PF02239 Cytochrom_D1: Cytochr 99.2 2.2E-09 4.7E-14 65.8 13.7 91 18-115 6-97 (369)
208 PF00400 WD40: WD domain, G-be 99.2 1.5E-10 3.2E-15 48.4 6.2 38 38-81 2-39 (39)
209 KOG2139|consensus 99.2 1.2E-09 2.6E-14 65.2 11.6 112 4-116 140-259 (445)
210 PRK02889 tolB translocation pr 99.2 1E-09 2.2E-14 68.4 12.0 103 3-114 194-302 (427)
211 KOG0649|consensus 99.2 1.1E-09 2.3E-14 62.5 10.6 110 3-116 61-177 (325)
212 PRK04922 tolB translocation pr 99.2 1.6E-09 3.6E-14 67.6 12.4 102 4-114 203-310 (433)
213 KOG1524|consensus 99.2 2.7E-10 5.8E-15 71.0 8.7 92 2-114 184-275 (737)
214 KOG3881|consensus 99.2 2.5E-10 5.4E-15 68.3 7.9 95 4-106 247-342 (412)
215 PRK11028 6-phosphogluconolacto 99.2 5.5E-09 1.2E-13 63.1 13.7 108 6-115 176-293 (330)
216 KOG0650|consensus 99.2 4.6E-11 1E-15 74.9 4.8 105 4-116 566-671 (733)
217 PF02239 Cytochrom_D1: Cytochr 99.2 1.4E-08 3E-13 62.3 15.2 98 8-113 40-145 (369)
218 KOG3914|consensus 99.2 1.3E-10 2.9E-15 69.5 6.2 84 1-92 148-232 (390)
219 KOG1587|consensus 99.1 7.3E-10 1.6E-14 70.4 8.5 108 1-115 395-506 (555)
220 PRK03629 tolB translocation pr 99.1 1.1E-08 2.4E-13 63.9 13.6 101 5-114 243-349 (429)
221 COG4946 Uncharacterized protei 99.1 1E-08 2.3E-13 63.5 12.7 103 3-113 400-506 (668)
222 COG4946 Uncharacterized protei 99.1 2.3E-08 4.9E-13 62.0 14.0 103 3-113 358-461 (668)
223 KOG4497|consensus 99.1 6.7E-09 1.5E-13 61.6 11.4 103 6-115 50-153 (447)
224 PRK00178 tolB translocation pr 99.1 1.2E-08 2.7E-13 63.6 13.3 102 4-114 198-305 (430)
225 PRK11028 6-phosphogluconolacto 99.1 2.5E-08 5.3E-13 60.3 14.0 103 6-114 127-246 (330)
226 KOG1963|consensus 99.1 9.9E-09 2.1E-13 66.7 12.3 66 51-116 203-272 (792)
227 KOG1188|consensus 99.1 2.3E-09 4.9E-14 63.5 8.6 91 18-114 41-136 (376)
228 PRK04792 tolB translocation pr 99.1 1.6E-08 3.5E-13 63.5 12.5 101 5-114 218-324 (448)
229 PRK05137 tolB translocation pr 99.1 2.7E-08 5.8E-13 62.3 13.2 102 4-114 245-352 (435)
230 TIGR02800 propeller_TolB tol-p 99.0 2.4E-08 5.3E-13 62.0 12.8 101 5-114 190-296 (417)
231 PRK01742 tolB translocation pr 99.0 1.3E-08 2.8E-13 63.6 10.4 99 4-115 291-391 (429)
232 PF11768 DUF3312: Protein of u 99.0 1E-08 2.3E-13 64.4 9.6 74 2-84 257-330 (545)
233 KOG4227|consensus 99.0 5.3E-08 1.1E-12 59.2 12.2 107 3-114 104-214 (609)
234 KOG4547|consensus 99.0 2.2E-08 4.7E-13 62.8 10.9 65 51-115 100-164 (541)
235 PRK02889 tolB translocation pr 99.0 7E-08 1.5E-12 60.4 13.2 101 5-115 284-390 (427)
236 KOG2321|consensus 99.0 2.6E-08 5.6E-13 62.8 11.0 108 4-112 175-290 (703)
237 PRK04922 tolB translocation pr 99.0 9.2E-08 2E-12 59.9 13.4 101 5-114 248-354 (433)
238 KOG1310|consensus 99.0 2.3E-09 5E-14 67.2 6.2 71 40-116 43-116 (758)
239 KOG1587|consensus 99.0 3.5E-08 7.7E-13 63.0 11.5 110 4-115 242-368 (555)
240 KOG4497|consensus 99.0 3.9E-09 8.5E-14 62.6 6.4 97 9-114 13-110 (447)
241 KOG0280|consensus 99.0 7.6E-08 1.7E-12 56.3 11.5 103 7-116 124-232 (339)
242 PRK01029 tolB translocation pr 99.0 1.3E-07 2.8E-12 59.2 13.4 99 7-113 283-388 (428)
243 KOG2695|consensus 98.9 5.7E-09 1.2E-13 62.1 6.3 87 2-92 296-385 (425)
244 TIGR02800 propeller_TolB tol-p 98.9 2.2E-07 4.7E-12 57.8 13.2 102 5-115 234-341 (417)
245 KOG0280|consensus 98.9 5.6E-08 1.2E-12 56.9 9.4 98 3-107 164-265 (339)
246 PF10282 Lactonase: Lactonase, 98.9 1.3E-06 2.9E-11 53.3 15.7 111 4-115 191-311 (345)
247 PF00400 WD40: WD domain, G-be 98.9 1.1E-08 2.4E-13 42.6 4.9 31 2-33 9-39 (39)
248 KOG4640|consensus 98.9 5.7E-08 1.2E-12 61.8 9.7 93 5-105 21-115 (665)
249 PRK04792 tolB translocation pr 98.8 4.9E-07 1.1E-11 57.0 13.1 99 7-114 264-368 (448)
250 KOG1517|consensus 98.8 3.5E-08 7.6E-13 66.2 7.9 109 3-116 1253-1372(1387)
251 KOG1240|consensus 98.8 5.3E-07 1.2E-11 61.5 12.7 57 51-107 1193-1250(1431)
252 KOG1334|consensus 98.8 1.4E-08 3E-13 62.8 5.0 107 5-116 337-457 (559)
253 PRK01029 tolB translocation pr 98.8 6.2E-07 1.4E-11 56.2 12.3 103 5-114 231-345 (428)
254 PRK04043 tolB translocation pr 98.8 2.2E-06 4.8E-11 53.7 14.6 101 5-114 188-295 (419)
255 PRK00178 tolB translocation pr 98.8 1.1E-06 2.3E-11 55.1 13.3 100 6-114 244-349 (430)
256 KOG2315|consensus 98.8 7.9E-08 1.7E-12 60.3 8.0 92 3-105 310-410 (566)
257 KOG1538|consensus 98.7 1.2E-06 2.5E-11 56.9 12.6 106 3-116 175-284 (1081)
258 KOG1334|consensus 98.7 1.7E-07 3.7E-12 58.2 8.2 114 2-116 140-303 (559)
259 KOG2314|consensus 98.7 4.9E-07 1.1E-11 57.2 10.1 103 4-111 249-362 (698)
260 KOG1517|consensus 98.7 6.4E-07 1.4E-11 60.5 10.6 106 5-114 1209-1323(1387)
261 KOG0644|consensus 98.6 1.7E-08 3.7E-13 66.1 2.5 71 2-83 230-300 (1113)
262 KOG2321|consensus 98.6 8.1E-07 1.8E-11 56.4 9.3 100 9-115 138-248 (703)
263 TIGR02658 TTQ_MADH_Hv methylam 98.6 7.5E-06 1.6E-10 50.1 12.9 80 27-114 27-123 (352)
264 PF15492 Nbas_N: Neuroblastoma 98.6 3.3E-06 7.1E-11 49.4 10.7 44 53-96 229-272 (282)
265 PF11768 DUF3312: Protein of u 98.6 7.3E-06 1.6E-10 52.1 12.8 106 5-115 206-319 (545)
266 PLN02919 haloacid dehalogenase 98.6 1.8E-05 3.9E-10 54.8 15.2 108 6-114 741-877 (1057)
267 PF08450 SGL: SMP-30/Gluconola 98.5 2.6E-05 5.6E-10 45.5 15.2 103 5-113 134-243 (246)
268 KOG2695|consensus 98.5 3E-07 6.6E-12 55.1 5.3 104 5-116 253-367 (425)
269 COG2706 3-carboxymuconate cycl 98.5 3.5E-05 7.5E-10 46.5 14.0 104 7-114 147-262 (346)
270 TIGR02658 TTQ_MADH_Hv methylam 98.5 1.7E-05 3.7E-10 48.6 12.6 80 12-92 53-145 (352)
271 PF07433 DUF1513: Protein of u 98.5 3.1E-05 6.7E-10 46.4 13.1 106 5-114 5-117 (305)
272 KOG2314|consensus 98.5 2.5E-06 5.4E-11 54.2 8.9 97 8-114 214-324 (698)
273 PRK04043 tolB translocation pr 98.5 3.2E-05 6.9E-10 48.6 13.5 99 5-114 233-337 (419)
274 KOG2041|consensus 98.5 3.1E-06 6.7E-11 55.5 8.7 104 2-112 12-132 (1189)
275 KOG4532|consensus 98.4 1.8E-05 4E-10 46.3 10.7 96 7-108 161-263 (344)
276 KOG3621|consensus 98.4 3.3E-06 7.2E-11 54.7 8.2 105 4-114 33-143 (726)
277 PF04762 IKI3: IKI3 family; I 98.4 2.6E-05 5.6E-10 53.4 12.4 108 4-114 120-275 (928)
278 PF10282 Lactonase: Lactonase, 98.4 0.00011 2.4E-09 45.1 15.6 109 5-114 87-210 (345)
279 smart00320 WD40 WD40 repeats. 98.3 5E-06 1.1E-10 33.3 5.6 38 38-81 3-40 (40)
280 KOG4714|consensus 98.3 5.8E-07 1.3E-11 52.0 3.3 74 5-84 180-255 (319)
281 KOG1645|consensus 98.3 4.7E-06 1E-10 51.0 7.1 76 3-85 192-268 (463)
282 COG2706 3-carboxymuconate cycl 98.3 0.00014 2.9E-09 44.1 14.7 111 5-116 191-311 (346)
283 KOG3617|consensus 98.3 2.1E-06 4.6E-11 57.2 5.5 98 8-114 19-120 (1416)
284 KOG3914|consensus 98.3 9.4E-06 2E-10 49.4 7.4 63 53-116 151-214 (390)
285 KOG1354|consensus 98.3 7E-05 1.5E-09 45.4 10.7 108 5-113 26-182 (433)
286 KOG1240|consensus 98.3 1.3E-05 2.8E-10 55.2 8.3 78 32-116 1034-1119(1431)
287 KOG4532|consensus 98.2 0.00012 2.5E-09 43.1 11.0 101 8-111 207-318 (344)
288 KOG1409|consensus 98.2 7.3E-06 1.6E-10 49.3 6.2 78 2-86 195-273 (404)
289 KOG1912|consensus 98.2 5.7E-05 1.2E-09 50.2 10.4 103 2-110 53-171 (1062)
290 KOG1064|consensus 98.2 3.7E-05 8.1E-10 55.1 9.8 104 5-116 2209-2357(2439)
291 KOG4714|consensus 98.2 2.1E-06 4.5E-11 49.8 3.2 62 55-116 181-245 (319)
292 KOG2066|consensus 98.2 0.00012 2.6E-09 48.6 11.1 90 16-115 82-178 (846)
293 KOG1354|consensus 98.2 1.6E-05 3.4E-10 48.0 6.5 109 6-115 215-349 (433)
294 KOG1064|consensus 98.1 3.7E-06 8.1E-11 59.8 4.0 86 5-92 2252-2375(2439)
295 KOG1409|consensus 98.1 6.9E-05 1.5E-09 45.3 8.6 66 51-116 195-261 (404)
296 PF04762 IKI3: IKI3 family; I 98.1 0.00018 3.8E-09 49.5 11.3 100 6-114 211-323 (928)
297 COG0823 TolB Periplasmic compo 98.1 8.2E-05 1.8E-09 46.9 8.7 100 6-114 239-344 (425)
298 KOG2041|consensus 98.0 1.3E-05 2.7E-10 52.8 4.9 102 2-109 69-170 (1189)
299 COG3386 Gluconolactonase [Carb 98.0 0.00071 1.5E-08 41.0 12.1 103 6-114 164-274 (307)
300 PF00930 DPPIV_N: Dipeptidyl p 98.0 9.1E-05 2E-09 45.6 8.2 82 26-115 22-120 (353)
301 COG5354 Uncharacterized protei 98.0 3.6E-05 7.9E-10 48.5 6.4 96 6-111 34-147 (561)
302 PLN02919 haloacid dehalogenase 98.0 0.00035 7.6E-09 48.8 11.6 80 6-87 805-892 (1057)
303 KOG0309|consensus 98.0 1.7E-05 3.6E-10 52.4 5.1 97 3-105 113-211 (1081)
304 KOG2066|consensus 98.0 3.8E-05 8.3E-10 50.8 6.2 94 4-115 39-137 (846)
305 PF08553 VID27: VID27 cytoplas 98.0 0.0002 4.3E-09 48.2 9.6 95 18-115 543-638 (794)
306 COG5354 Uncharacterized protei 98.0 0.00056 1.2E-08 43.5 10.7 98 4-113 274-377 (561)
307 PF07433 DUF1513: Protein of u 98.0 0.001 2.2E-08 40.1 12.7 96 10-112 56-179 (305)
308 smart00320 WD40 WD40 repeats. 97.9 3.1E-05 6.8E-10 30.8 4.0 30 3-33 11-40 (40)
309 PF04053 Coatomer_WDAD: Coatom 97.9 0.00046 9.9E-09 43.9 10.2 49 65-116 117-165 (443)
310 KOG4190|consensus 97.9 2.2E-05 4.7E-10 50.4 4.0 80 3-91 734-820 (1034)
311 PF12894 Apc4_WD40: Anaphase-p 97.9 0.00013 2.8E-09 31.6 5.3 33 53-86 11-43 (47)
312 COG0823 TolB Periplasmic compo 97.9 0.00044 9.6E-09 43.7 9.3 100 6-114 194-300 (425)
313 KOG4649|consensus 97.9 0.00083 1.8E-08 39.7 9.7 83 17-105 63-145 (354)
314 PRK02888 nitrous-oxide reducta 97.8 0.0008 1.7E-08 44.2 10.3 103 4-114 320-450 (635)
315 PF12894 Apc4_WD40: Anaphase-p 97.8 0.00015 3.2E-09 31.4 5.0 34 4-39 11-44 (47)
316 KOG2079|consensus 97.8 0.00014 3.1E-09 49.8 7.0 90 18-112 100-192 (1206)
317 TIGR03300 assembly_YfgL outer 97.8 0.0013 2.9E-08 40.8 10.4 71 18-95 280-350 (377)
318 KOG1912|consensus 97.7 0.00021 4.5E-09 47.7 6.3 91 6-105 17-119 (1062)
319 KOG3621|consensus 97.7 0.00021 4.4E-09 46.9 5.9 79 5-84 77-155 (726)
320 PF06977 SdiA-regulated: SdiA- 97.7 0.0032 6.8E-08 37.1 12.9 103 5-113 22-135 (248)
321 COG3490 Uncharacterized protei 97.7 0.0035 7.6E-08 37.6 10.3 102 9-114 72-180 (366)
322 PRK13616 lipoprotein LpqB; Pro 97.7 0.0015 3.3E-08 43.0 9.8 95 5-112 350-464 (591)
323 KOG1832|consensus 97.6 0.00037 8.1E-09 47.5 6.6 44 3-47 1100-1143(1516)
324 PRK02888 nitrous-oxide reducta 97.6 0.004 8.7E-08 41.2 10.9 82 26-115 214-340 (635)
325 PF02897 Peptidase_S9_N: Proly 97.6 0.0055 1.2E-07 38.6 11.3 98 8-114 127-245 (414)
326 KOG1645|consensus 97.5 0.00055 1.2E-08 42.4 6.2 60 53-113 193-253 (463)
327 PF08450 SGL: SMP-30/Gluconola 97.5 0.0051 1.1E-07 36.0 15.8 96 8-114 3-104 (246)
328 PF10313 DUF2415: Uncharacteri 97.5 0.0011 2.5E-08 27.9 5.4 32 5-36 1-34 (43)
329 KOG3617|consensus 97.5 0.00018 3.9E-09 48.6 4.0 70 7-83 62-131 (1416)
330 KOG4499|consensus 97.5 0.0065 1.4E-07 35.6 12.0 102 8-111 161-270 (310)
331 KOG1920|consensus 97.4 0.0025 5.4E-08 44.6 8.2 96 8-112 199-306 (1265)
332 COG5170 CDC55 Serine/threonine 97.4 0.00064 1.4E-08 41.0 4.9 108 3-113 171-298 (460)
333 PF14583 Pectate_lyase22: Olig 97.3 0.014 3E-07 36.6 11.5 94 11-111 42-140 (386)
334 KOG2444|consensus 97.3 0.0047 1E-07 35.7 7.8 94 16-113 69-163 (238)
335 PF14655 RAB3GAP2_N: Rab3 GTPa 97.3 0.012 2.7E-07 37.3 10.3 81 6-92 309-407 (415)
336 KOG1275|consensus 97.3 0.01 2.2E-07 40.9 10.2 89 17-115 147-235 (1118)
337 PF08553 VID27: VID27 cytoplas 97.3 0.0022 4.8E-08 43.5 7.4 60 16-82 587-646 (794)
338 KOG0882|consensus 97.3 0.0013 2.9E-08 41.4 5.8 87 2-89 142-237 (558)
339 KOG2395|consensus 97.3 0.0037 8.1E-08 40.4 7.8 90 22-115 399-491 (644)
340 KOG4190|consensus 97.3 0.0015 3.2E-08 42.5 6.1 104 3-113 783-894 (1034)
341 COG5170 CDC55 Serine/threonine 97.3 0.0056 1.2E-07 37.2 8.1 79 5-84 27-118 (460)
342 PF06977 SdiA-regulated: SdiA- 97.2 0.014 3.1E-07 34.5 10.9 107 4-112 117-238 (248)
343 KOG2079|consensus 97.2 0.0055 1.2E-07 42.6 8.5 69 4-76 130-198 (1206)
344 PF04053 Coatomer_WDAD: Coatom 97.2 0.0085 1.8E-07 38.4 8.6 80 17-106 117-207 (443)
345 KOG4640|consensus 97.2 0.004 8.6E-08 40.8 7.1 62 54-116 21-83 (665)
346 KOG1832|consensus 97.2 0.0018 4E-08 44.4 5.8 62 53-114 1101-1162(1516)
347 PF15492 Nbas_N: Neuroblastoma 97.2 0.018 3.9E-07 34.3 12.0 76 10-91 3-80 (282)
348 KOG1920|consensus 97.1 0.051 1.1E-06 38.7 12.8 69 5-81 69-137 (1265)
349 KOG1275|consensus 97.1 0.02 4.3E-07 39.6 9.9 61 16-84 186-255 (1118)
350 PF06433 Me-amine-dh_H: Methyl 97.0 0.012 2.7E-07 36.2 7.9 59 28-93 270-330 (342)
351 PF13360 PQQ_2: PQQ-like domai 97.0 0.023 4.9E-07 32.9 9.3 68 16-91 35-102 (238)
352 COG3391 Uncharacterized conser 97.0 0.038 8.2E-07 34.8 13.7 100 7-114 76-178 (381)
353 KOG4649|consensus 97.0 0.031 6.6E-07 33.4 11.2 97 12-116 18-114 (354)
354 TIGR03300 assembly_YfgL outer 96.9 0.041 8.8E-07 34.4 11.3 67 18-92 66-132 (377)
355 PF14783 BBS2_Mid: Ciliary BBS 96.9 0.017 3.6E-07 29.8 13.0 66 7-82 2-70 (111)
356 KOG2114|consensus 96.9 0.075 1.6E-06 36.6 12.3 103 4-112 125-231 (933)
357 PF12234 Rav1p_C: RAVE protein 96.8 0.074 1.6E-06 35.7 13.2 93 17-114 41-147 (631)
358 COG3391 Uncharacterized conser 96.5 0.09 2E-06 33.1 13.5 99 6-112 117-223 (381)
359 KOG2377|consensus 96.5 0.075 1.6E-06 34.4 8.7 103 2-111 64-169 (657)
360 PF14870 PSII_BNR: Photosynthe 96.5 0.088 1.9E-06 32.2 13.3 103 5-115 145-252 (302)
361 PF02897 Peptidase_S9_N: Proly 96.5 0.039 8.4E-07 34.9 7.6 58 56-114 126-188 (414)
362 KOG2395|consensus 96.4 0.024 5.2E-07 36.9 6.4 60 16-82 440-499 (644)
363 PF07995 GSDH: Glucose / Sorbo 96.4 0.11 2.4E-06 32.1 14.2 105 5-114 2-132 (331)
364 COG3386 Gluconolactonase [Carb 96.3 0.11 2.4E-06 31.8 10.2 60 54-113 111-180 (307)
365 PF15390 DUF4613: Domain of un 96.3 0.17 3.7E-06 33.7 10.8 107 4-113 56-173 (671)
366 PF10168 Nup88: Nuclear pore c 96.3 0.2 4.4E-06 34.4 10.9 78 6-85 86-181 (717)
367 PRK13616 lipoprotein LpqB; Pro 96.3 0.18 3.9E-06 33.8 11.2 103 6-111 398-512 (591)
368 PF11715 Nup160: Nucleoporin N 96.2 0.18 4E-06 33.3 10.1 37 55-91 216-256 (547)
369 PRK10115 protease 2; Provision 96.1 0.27 5.8E-06 33.7 12.0 97 7-112 129-239 (686)
370 KOG0309|consensus 96.0 0.02 4.3E-07 38.8 4.6 94 7-107 161-257 (1081)
371 PF04841 Vps16_N: Vps16, N-ter 95.9 0.23 5E-06 31.8 11.0 48 28-83 62-109 (410)
372 KOG2114|consensus 95.9 0.078 1.7E-06 36.5 7.0 95 12-113 31-143 (933)
373 PF07569 Hira: TUP1-like enhan 95.8 0.17 3.6E-06 29.5 9.8 72 16-88 21-100 (219)
374 KOG1008|consensus 95.8 0.0011 2.4E-08 43.6 -1.4 105 3-113 101-214 (783)
375 PRK11138 outer membrane biogen 95.8 0.26 5.6E-06 31.2 11.1 28 65-92 335-362 (394)
376 PF10647 Gmad1: Lipoprotein Lp 95.7 0.2 4.4E-06 29.8 11.7 99 6-114 25-130 (253)
377 PF06433 Me-amine-dh_H: Methyl 95.7 0.26 5.5E-06 30.7 11.2 85 5-92 36-135 (342)
378 COG3204 Uncharacterized protei 95.6 0.25 5.5E-06 30.1 11.3 103 4-112 85-197 (316)
379 PF13360 PQQ_2: PQQ-like domai 95.6 0.2 4.3E-06 29.0 13.8 73 18-93 77-150 (238)
380 COG3490 Uncharacterized protei 95.5 0.28 6.1E-06 29.9 9.9 95 11-112 120-242 (366)
381 KOG3630|consensus 95.5 0.084 1.8E-06 37.7 6.1 98 7-112 158-260 (1405)
382 PF14583 Pectate_lyase22: Olig 95.5 0.35 7.6E-06 30.7 12.4 96 10-114 243-369 (386)
383 PRK11138 outer membrane biogen 95.4 0.32 7E-06 30.7 8.3 66 18-92 121-187 (394)
384 PF10313 DUF2415: Uncharacteri 95.4 0.077 1.7E-06 22.5 5.6 31 55-85 2-35 (43)
385 TIGR02276 beta_rpt_yvtn 40-res 95.3 0.073 1.6E-06 21.8 6.4 40 63-103 1-41 (42)
386 PF04841 Vps16_N: Vps16, N-ter 95.1 0.49 1.1E-05 30.3 12.4 55 54-108 217-272 (410)
387 PF10214 Rrn6: RNA polymerase 95.1 0.73 1.6E-05 32.1 11.1 100 6-106 147-257 (765)
388 PF08596 Lgl_C: Lethal giant l 95.1 0.51 1.1E-05 30.1 9.5 78 4-83 86-173 (395)
389 KOG2247|consensus 95.0 0.0034 7.3E-08 40.3 -1.1 101 4-112 74-176 (615)
390 PF07569 Hira: TUP1-like enhan 95.0 0.37 8E-06 28.1 7.9 54 61-114 18-85 (219)
391 KOG2444|consensus 94.9 0.16 3.6E-06 29.7 5.4 64 16-84 113-178 (238)
392 TIGR02604 Piru_Ver_Nterm putat 94.8 0.56 1.2E-05 29.5 12.3 59 54-113 124-201 (367)
393 PF14870 PSII_BNR: Photosynthe 94.8 0.51 1.1E-05 29.0 13.7 60 53-112 144-203 (302)
394 TIGR03606 non_repeat_PQQ dehyd 94.8 0.67 1.4E-05 30.2 14.7 109 4-114 29-164 (454)
395 KOG0882|consensus 94.7 0.68 1.5E-05 30.1 8.9 88 24-116 119-222 (558)
396 KOG4460|consensus 94.7 0.72 1.6E-05 30.7 8.2 81 7-88 106-203 (741)
397 TIGR02604 Piru_Ver_Nterm putat 94.7 0.63 1.4E-05 29.3 12.0 101 4-114 13-142 (367)
398 COG5167 VID27 Protein involved 94.7 0.57 1.2E-05 31.1 7.7 51 65-115 573-623 (776)
399 KOG2377|consensus 94.6 0.73 1.6E-05 30.2 8.1 55 53-107 66-124 (657)
400 PF08596 Lgl_C: Lethal giant l 94.4 0.79 1.7E-05 29.3 11.3 83 6-90 3-122 (395)
401 PF15390 DUF4613: Domain of un 94.4 0.66 1.4E-05 31.2 7.6 68 8-83 116-186 (671)
402 TIGR03075 PQQ_enz_alc_DH PQQ-d 94.2 1 2.2E-05 30.0 9.2 78 27-111 441-519 (527)
403 PF07676 PD40: WD40-like Beta 94.2 0.16 3.5E-06 20.6 4.0 21 94-114 7-27 (39)
404 PF03088 Str_synth: Strictosid 94.1 0.34 7.3E-06 24.1 8.3 38 74-112 36-73 (89)
405 PF14655 RAB3GAP2_N: Rab3 GTPa 94.1 0.29 6.4E-06 31.4 5.7 42 53-94 307-348 (415)
406 TIGR02276 beta_rpt_yvtn 40-res 93.7 0.22 4.7E-06 20.3 6.0 31 16-46 2-33 (42)
407 COG5167 VID27 Protein involved 93.7 0.55 1.2E-05 31.1 6.3 61 16-83 572-632 (776)
408 PF14761 HPS3_N: Hermansky-Pud 93.5 0.86 1.9E-05 26.6 7.0 46 67-113 30-77 (215)
409 PRK10115 protease 2; Provision 93.3 0.44 9.6E-06 32.7 5.8 57 55-113 128-189 (686)
410 KOG1916|consensus 93.3 0.038 8.3E-07 38.4 0.9 109 4-116 132-256 (1283)
411 KOG1008|consensus 93.3 0.014 3.1E-07 38.7 -0.9 91 8-108 158-256 (783)
412 PF13449 Phytase-like: Esteras 93.2 1.2 2.7E-05 27.6 12.7 102 8-111 88-230 (326)
413 PF00780 CNH: CNH domain; Int 93.0 1.2 2.6E-05 26.6 10.4 61 16-85 6-66 (275)
414 PF05096 Glu_cyclase_2: Glutam 92.9 1.3 2.7E-05 26.8 12.5 97 16-114 138-249 (264)
415 cd00216 PQQ_DH Dehydrogenases 92.7 1.9 4.1E-05 28.4 8.1 74 18-92 62-137 (488)
416 PF03178 CPSF_A: CPSF A subuni 92.6 1.5 3.3E-05 27.0 12.4 99 4-113 88-190 (321)
417 PF11715 Nup160: Nucleoporin N 92.6 0.68 1.5E-05 30.7 5.8 29 16-44 229-257 (547)
418 smart00564 PQQ beta-propeller 92.4 0.32 7E-06 18.7 4.1 25 18-42 7-31 (33)
419 KOG2280|consensus 92.3 2.6 5.6E-05 29.4 8.0 49 27-83 64-112 (829)
420 COG4257 Vgb Streptogramin lyas 92.2 1.7 3.7E-05 26.7 10.6 102 5-114 62-166 (353)
421 KOG1520|consensus 92.2 2 4.3E-05 27.3 8.5 106 4-113 114-236 (376)
422 PRK13684 Ycf48-like protein; P 91.9 2 4.3E-05 26.8 11.8 101 5-113 173-277 (334)
423 PF12234 Rav1p_C: RAVE protein 91.9 2.9 6.4E-05 28.6 10.4 60 55-114 31-93 (631)
424 KOG4499|consensus 91.8 1.7 3.8E-05 26.0 8.6 47 10-63 217-263 (310)
425 PF14761 HPS3_N: Hermansky-Pud 91.6 1.7 3.7E-05 25.4 7.2 56 18-80 29-92 (215)
426 PF01436 NHL: NHL repeat; Int 91.2 0.45 9.7E-06 17.9 4.2 25 56-80 4-28 (28)
427 PF03088 Str_synth: Strictosid 90.9 1.2 2.6E-05 22.2 8.8 48 25-79 35-83 (89)
428 PF14783 BBS2_Mid: Ciliary BBS 90.6 1.5 3.2E-05 22.8 8.0 65 3-78 41-109 (111)
429 PF07250 Glyoxal_oxid_N: Glyox 90.4 2.5 5.5E-05 25.3 6.2 80 29-115 48-137 (243)
430 KOG1897|consensus 90.2 5.5 0.00012 28.9 9.8 99 8-113 778-886 (1096)
431 TIGR02171 Fb_sc_TIGR02171 Fibr 89.8 5.8 0.00013 28.5 9.8 78 26-110 328-413 (912)
432 PF10647 Gmad1: Lipoprotein Lp 89.4 3.1 6.8E-05 24.9 12.7 104 6-114 67-184 (253)
433 PF01011 PQQ: PQQ enzyme repea 89.4 0.87 1.9E-05 18.4 4.5 28 19-46 2-29 (38)
434 KOG1916|consensus 89.3 0.43 9.4E-06 33.7 2.6 80 16-96 194-283 (1283)
435 PF12657 TFIIIC_delta: Transcr 89.2 2.6 5.6E-05 23.6 9.6 29 55-83 87-121 (173)
436 PF05787 DUF839: Bacterial pro 89.0 5.2 0.00011 26.9 12.3 30 84-113 489-519 (524)
437 PF00930 DPPIV_N: Dipeptidyl p 88.8 4.2 9.2E-05 25.5 12.7 98 9-113 239-345 (353)
438 KOG3616|consensus 88.4 1.9 4.2E-05 30.3 5.1 66 6-81 16-81 (1636)
439 PF01731 Arylesterase: Arylest 88.0 2.1 4.6E-05 21.1 6.1 30 54-83 54-84 (86)
440 PHA02713 hypothetical protein; 87.6 6.7 0.00015 26.5 8.2 23 16-38 351-378 (557)
441 PHA02713 hypothetical protein; 87.3 7.1 0.00015 26.4 8.5 24 64-87 463-493 (557)
442 PF03022 MRJP: Major royal jel 87.2 5 0.00011 24.6 12.8 66 27-92 34-105 (287)
443 PF05694 SBP56: 56kDa selenium 87.2 6.5 0.00014 25.9 10.0 85 27-115 222-331 (461)
444 PF13449 Phytase-like: Esteras 87.1 5.4 0.00012 24.9 12.7 107 5-113 20-164 (326)
445 KOG3630|consensus 87.0 8 0.00017 28.7 7.4 63 4-70 198-260 (1405)
446 PF12341 DUF3639: Protein of u 87.0 1.1 2.4E-05 16.9 3.3 26 5-33 2-27 (27)
447 COG3204 Uncharacterized protei 86.7 5.6 0.00012 24.7 6.3 40 53-92 85-124 (316)
448 PF08728 CRT10: CRT10; InterP 86.5 9.1 0.0002 26.9 10.4 84 16-106 113-221 (717)
449 cd00216 PQQ_DH Dehydrogenases 85.7 8.2 0.00018 25.6 9.3 68 26-93 365-434 (488)
450 PHA03098 kelch-like protein; P 85.1 9 0.0002 25.6 7.4 24 64-87 437-468 (534)
451 PF00780 CNH: CNH domain; Int 84.9 6.3 0.00014 23.6 11.5 103 5-113 36-154 (275)
452 KOG4441|consensus 83.8 11 0.00025 25.6 9.2 63 17-86 333-407 (571)
453 PF14781 BBS2_N: Ciliary BBSom 83.4 5.4 0.00012 21.6 11.6 84 10-103 4-100 (136)
454 PF12768 Rax2: Cortical protei 83.1 4.9 0.00011 24.6 4.6 41 74-114 15-55 (281)
455 TIGR03118 PEPCTERM_chp_1 conse 82.9 9.3 0.0002 24.0 9.8 76 25-105 220-307 (336)
456 PF08728 CRT10: CRT10; InterP 82.4 15 0.00032 25.9 7.7 73 5-82 164-245 (717)
457 PF11635 Med16: Mediator compl 82.2 15 0.00033 26.0 7.7 74 4-78 259-345 (753)
458 TIGR03074 PQQ_membr_DH membran 82.2 16 0.00034 26.1 9.7 75 18-92 261-353 (764)
459 PF14269 Arylsulfotran_2: Aryl 81.9 9.9 0.00021 23.6 7.9 39 7-46 146-184 (299)
460 TIGR02608 delta_60_rpt delta-6 81.7 3.6 7.8E-05 18.5 3.2 18 97-114 2-19 (55)
461 PLN00033 photosystem II stabil 81.7 12 0.00026 24.3 11.9 59 54-114 281-346 (398)
462 PF13570 PQQ_3: PQQ-like domai 81.6 2.8 6E-05 17.0 3.4 20 17-36 21-40 (40)
463 PF05096 Glu_cyclase_2: Glutam 81.1 10 0.00022 23.2 13.9 88 8-103 48-137 (264)
464 KOG3616|consensus 81.0 5.8 0.00013 28.2 4.8 34 54-87 15-48 (1636)
465 TIGR03075 PQQ_enz_alc_DH PQQ-d 80.7 15 0.00032 24.8 8.6 68 18-92 70-147 (527)
466 TIGR02171 Fb_sc_TIGR02171 Fibr 80.1 11 0.00024 27.2 5.9 59 3-68 348-413 (912)
467 KOG4441|consensus 79.9 17 0.00036 24.9 7.8 65 17-87 285-361 (571)
468 COG1770 PtrB Protease II [Amin 79.6 9.7 0.00021 26.4 5.3 60 55-116 130-194 (682)
469 PF12768 Rax2: Cortical protei 78.7 13 0.00028 22.9 9.4 74 25-104 14-97 (281)
470 PF07995 GSDH: Glucose / Sorbo 78.6 14 0.0003 23.2 9.0 50 55-106 3-59 (331)
471 PF03178 CPSF_A: CPSF A subuni 78.3 13 0.00029 22.9 8.1 63 17-83 139-202 (321)
472 PHA03098 kelch-like protein; P 78.1 18 0.00039 24.2 8.2 24 64-87 389-418 (534)
473 TIGR03032 conserved hypothetic 78.1 15 0.00032 23.3 11.3 84 16-108 212-317 (335)
474 PF14727 PHTB1_N: PTHB1 N-term 77.3 18 0.00038 23.8 11.7 23 14-36 34-56 (418)
475 PRK13684 Ycf48-like protein; P 77.2 15 0.00033 23.0 10.6 58 54-113 173-232 (334)
476 TIGR03118 PEPCTERM_chp_1 conse 77.1 16 0.00034 23.1 9.8 75 6-82 24-117 (336)
477 COG3823 Glutamine cyclotransfe 77.0 13 0.00028 22.1 7.2 71 16-92 55-128 (262)
478 PF10584 Proteasome_A_N: Prote 72.8 0.69 1.5E-05 16.8 -0.6 8 102-109 7-14 (23)
479 TIGR03054 photo_alph_chp1 puta 72.4 13 0.00029 20.1 7.5 67 19-90 43-120 (135)
480 PF14779 BBS1: Ciliary BBSome 72.4 19 0.00042 21.9 7.3 43 4-46 176-224 (257)
481 KOG2280|consensus 72.3 33 0.00071 24.5 8.6 30 4-35 83-112 (829)
482 TIGR03074 PQQ_membr_DH membran 71.9 34 0.00074 24.6 10.3 75 18-92 195-287 (764)
483 PF05935 Arylsulfotrans: Aryls 69.8 30 0.00065 23.1 9.9 80 25-114 126-208 (477)
484 PF05694 SBP56: 56kDa selenium 69.8 30 0.00065 23.1 13.2 96 11-110 136-261 (461)
485 PF05787 DUF839: Bacterial pro 69.6 32 0.0007 23.4 6.3 18 53-70 501-518 (524)
486 PF05935 Arylsulfotrans: Aryls 69.5 31 0.00066 23.1 10.9 40 55-94 272-312 (477)
487 KOG1520|consensus 69.4 6.7 0.00015 25.1 2.7 41 25-72 197-237 (376)
488 KOG2727|consensus 69.3 11 0.00023 27.5 3.8 78 8-91 325-414 (1244)
489 KOG3522|consensus 65.3 25 0.00053 25.4 4.8 103 2-116 579-689 (925)
490 PHA02790 Kelch-like protein; P 65.2 38 0.00083 22.6 8.2 22 63-87 406-427 (480)
491 KOG1898|consensus 64.3 59 0.0013 24.5 9.4 72 18-92 550-627 (1205)
492 COG4257 Vgb Streptogramin lyas 64.3 33 0.00071 21.5 5.9 59 54-112 62-120 (353)
493 PF08801 Nucleoporin_N: Nup133 64.0 38 0.00081 22.1 5.4 30 55-84 191-220 (422)
494 KOG1983|consensus 63.5 42 0.00091 25.0 5.8 26 62-87 243-268 (993)
495 KOG1900|consensus 61.0 74 0.0016 24.5 8.5 85 25-115 97-198 (1311)
496 PF14269 Arylsulfotran_2: Aryl 60.5 39 0.00084 21.1 5.7 40 55-94 145-184 (299)
497 PF03022 MRJP: Major royal jel 60.2 38 0.00083 20.9 9.1 59 55-113 187-253 (287)
498 COG3823 Glutamine cyclotransfe 58.7 38 0.00081 20.3 8.1 49 65-113 186-247 (262)
499 PLN00033 photosystem II stabil 57.9 51 0.0011 21.6 12.8 101 5-114 281-389 (398)
500 PF14727 PHTB1_N: PTHB1 N-term 55.9 57 0.0012 21.6 6.9 59 17-82 145-203 (418)
No 1
>KOG0263|consensus
Probab=99.94 E-value=3.7e-26 Score=142.51 Aligned_cols=108 Identities=20% Similarity=0.295 Sum_probs=103.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+-|.|+.|+| +.+++++|+.|.+|++||..+|..++.|.+| .+.|.+++++|+|+++++|++|+.|.+||
T Consensus 533 ghlsDV~cv~FHP-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH------~~~V~al~~Sp~Gr~LaSg~ed~~I~iWD 605 (707)
T KOG0263|consen 533 GHLSDVDCVSFHP-NSNYVATGSSDRTVRLWDVSTGNSVRIFTGH------KGPVTALAFSPCGRYLASGDEDGLIKIWD 605 (707)
T ss_pred ccccccceEEECC-cccccccCCCCceEEEEEcCCCcEEEEecCC------CCceEEEEEcCCCceEeecccCCcEEEEE
Confidence 4778899999999 8999999999999999999999999999999 78999999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+++.+..+.+|.+.+.++.|+++|..|++++.|
T Consensus 606 l~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~D 640 (707)
T KOG0263|consen 606 LANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGAD 640 (707)
T ss_pred cCCCcchhhhhcccCceeEEEEecCCCEEEecCCC
Confidence 99999999999999999999999999999999876
No 2
>KOG0263|consensus
Probab=99.94 E-value=7.8e-26 Score=141.06 Aligned_cols=115 Identities=24% Similarity=0.332 Sum_probs=106.4
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------------------------
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------ 50 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------ 50 (116)
+.|.|+|+...|+| +.++|+++++|+.+++|.+.+...+..+++|...+
T Consensus 448 ~GH~GPVyg~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~ 526 (707)
T KOG0263|consen 448 YGHSGPVYGCSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK 526 (707)
T ss_pred ecCCCceeeeeecc-cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCC
Confidence 35899999999999 78999999999999999999988888888775522
Q ss_pred ------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 ------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 ------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|-+.+.++.|+|+..++++|+.|.++++||+.+|..++.+.+|.++|.+++|+|+|++|++|+.|
T Consensus 527 PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed 598 (707)
T KOG0263|consen 527 PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDED 598 (707)
T ss_pred chhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccC
Confidence 788889999999999999999999999999999999999999999999999999999999999876
No 3
>KOG0271|consensus
Probab=99.93 E-value=3.6e-25 Score=129.89 Aligned_cols=108 Identities=20% Similarity=0.294 Sum_probs=99.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.++.|+| ++..|++|+.|.++++||+.+..+.+++++| ..-|.+++|+||++.|++|+.||.|++||
T Consensus 113 GH~e~Vl~~~fsp-~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH------~~WVlcvawsPDgk~iASG~~dg~I~lwd 185 (480)
T KOG0271|consen 113 GHGEAVLSVQFSP-TGSRLVTGSGDTTVRLWDLDTETPLFTCKGH------KNWVLCVAWSPDGKKIASGSKDGSIRLWD 185 (480)
T ss_pred CCCCcEEEEEecC-CCceEEecCCCceEEeeccCCCCcceeecCC------ccEEEEEEECCCcchhhccccCCeEEEec
Confidence 3789999999999 8999999999999999999999999999999 67899999999999999999999999999
Q ss_pred CCCCeEE-EEeecccccEEEEEECC-----CCcEEEeeecC
Q psy17133 82 NVSGKLV-HSMVAHLDAVTSLAVDP-----QGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~s~d 116 (116)
.++|+.+ +.+.+|...|++++|.| .++.|+++|.|
T Consensus 186 pktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD 226 (480)
T KOG0271|consen 186 PKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD 226 (480)
T ss_pred CCCCCcccccccCcccceeEEeecccccCCCccceecccCC
Confidence 9988775 56889999999999965 67789988876
No 4
>KOG0272|consensus
Probab=99.93 E-value=6.9e-25 Score=129.58 Aligned_cols=107 Identities=20% Similarity=0.249 Sum_probs=102.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.+++|.| +|..+++|+.|..-++||+.+++.+..+.+| ...|.++.|+|+|..+++|+.|++++|||+
T Consensus 302 Hs~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH------~k~I~~V~fsPNGy~lATgs~Dnt~kVWDL 374 (459)
T KOG0272|consen 302 HSKGVFSIAFQP-DGSLAATGGLDSLGRVWDLRTGRCIMFLAGH------IKEILSVAFSPNGYHLATGSSDNTCKVWDL 374 (459)
T ss_pred cccccceeEecC-CCceeeccCccchhheeecccCcEEEEeccc------ccceeeEeECCCceEEeecCCCCcEEEeee
Confidence 778999999999 8999999999999999999999999999999 679999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
+..+.+.++.+|...|+.++|+| .|.+|+|+|.|
T Consensus 375 R~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD 409 (459)
T KOG0272|consen 375 RMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYD 409 (459)
T ss_pred cccccceecccccchhhheEecccCCeEEEEcccC
Confidence 98889999999999999999999 78899999987
No 5
>KOG0271|consensus
Probab=99.92 E-value=1.2e-24 Score=127.69 Aligned_cols=109 Identities=18% Similarity=0.256 Sum_probs=103.6
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
|.|...|..+.|+| ++.++++++-|..|++|+-.+|+.+..|.+| -..|..++|+.|.+++++++.|.++++|
T Consensus 364 tgHq~lVn~V~fSP-d~r~IASaSFDkSVkLW~g~tGk~lasfRGH------v~~VYqvawsaDsRLlVS~SkDsTLKvw 436 (480)
T KOG0271|consen 364 TGHQALVNHVSFSP-DGRYIASASFDKSVKLWDGRTGKFLASFRGH------VAAVYQVAWSADSRLLVSGSKDSTLKVW 436 (480)
T ss_pred hchhhheeeEEECC-CccEEEEeecccceeeeeCCCcchhhhhhhc------cceeEEEEeccCccEEEEcCCCceEEEE
Confidence 45788899999999 8999999999999999999999999999999 5689999999999999999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++.++...+.+|...|.++.|+|||..+++|+.|
T Consensus 437 ~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkd 472 (480)
T KOG0271|consen 437 DVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKD 472 (480)
T ss_pred EeeeeeecccCCCCCceEEEEEecCCCceeecCCCc
Confidence 999999999999999999999999999999999876
No 6
>KOG0272|consensus
Probab=99.92 E-value=2.8e-25 Score=131.23 Aligned_cols=108 Identities=21% Similarity=0.277 Sum_probs=102.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|..+|..++|+| +|++|++++-|.+-++||+.+++.+...++| ...|.+++|+|||.++++|+.|..-++||
T Consensus 259 gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QEGH------s~~v~~iaf~~DGSL~~tGGlD~~~RvWD 331 (459)
T KOG0272|consen 259 GHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQEGH------SKGVFSIAFQPDGSLAATGGLDSLGRVWD 331 (459)
T ss_pred cchhhheeeeecC-CCceeeecccccchhhcccccchhhHhhccc------ccccceeEecCCCceeeccCccchhheee
Confidence 3678899999999 8999999999999999999999988888999 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++|+++-.+.+|...|.+++|+|+|-.|+|||.|
T Consensus 332 lRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~D 366 (459)
T KOG0272|consen 332 LRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSD 366 (459)
T ss_pred cccCcEEEEecccccceeeEeECCCceEEeecCCC
Confidence 99999999999999999999999999999999987
No 7
>KOG0266|consensus
Probab=99.92 E-value=1.7e-23 Score=129.49 Aligned_cols=107 Identities=21% Similarity=0.439 Sum_probs=100.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEEC-CCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDL-ETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|...|.+++|+| ++.++++++.|.++++||+ ..+..+..+++| ...+++++|+|+++.+++++.|++|++||
T Consensus 202 h~~~v~~~~fs~-d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH------~~~v~~~~f~p~g~~i~Sgs~D~tvriWd 274 (456)
T KOG0266|consen 202 HTRGVSDVAFSP-DGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGH------STYVTSVAFSPDGNLLVSGSDDGTVRIWD 274 (456)
T ss_pred cccceeeeEECC-CCcEEEEecCCceEEEeeccCCCeEEEEecCC------CCceEEEEecCCCCEEEEecCCCcEEEEe
Confidence 677899999999 8899999999999999999 455788999999 77899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++++...+.+|.+.|+.++|++++++|++++.|
T Consensus 275 ~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d 309 (456)
T KOG0266|consen 275 VRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYD 309 (456)
T ss_pred ccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCC
Confidence 99999999999999999999999999999999865
No 8
>KOG0284|consensus
Probab=99.91 E-value=2.3e-24 Score=127.06 Aligned_cols=107 Identities=21% Similarity=0.387 Sum_probs=99.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|++++|+| +...++++++|+.++|||..-.++...+.+| .-.+.+++|+|...++++++.|+.|++||.
T Consensus 179 h~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~vL~GH------gwdVksvdWHP~kgLiasgskDnlVKlWDp 251 (464)
T KOG0284|consen 179 HAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERVLRGH------GWDVKSVDWHPTKGLIASGSKDNLVKLWDP 251 (464)
T ss_pred hhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchhheeccC------CCCcceeccCCccceeEEccCCceeEeecC
Confidence 347899999999 7799999999999999999878777888888 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++.++.++..|+..|..+.|+|++++|+|+|.|
T Consensus 252 rSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD 285 (464)
T KOG0284|consen 252 RSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKD 285 (464)
T ss_pred CCcchhhhhhhccceEEEEEEcCCCCeeEEccCC
Confidence 9999999999999999999999999999999987
No 9
>PTZ00421 coronin; Provisional
Probab=99.91 E-value=1.9e-22 Score=125.32 Aligned_cols=108 Identities=20% Similarity=0.320 Sum_probs=96.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDD 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d 74 (116)
|.+.|.+++|+|.++++|++++.|+.|++||+.++ +++..+.+| ...|.+++|+|++ .++++++.|
T Consensus 74 H~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH------~~~V~~l~f~P~~~~iLaSgs~D 147 (493)
T PTZ00421 74 QEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGH------TKKVGIVSFHPSAMNVLASAGAD 147 (493)
T ss_pred CCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCC------CCcEEEEEeCcCCCCEEEEEeCC
Confidence 78899999999966689999999999999999754 245667777 6789999999985 699999999
Q ss_pred CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.|++||+.+++.+..+..|...|.+++|+|++++|++++.|
T Consensus 148 gtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D 189 (493)
T PTZ00421 148 MVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD 189 (493)
T ss_pred CEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC
Confidence 999999999999988888899999999999999999999876
No 10
>KOG0286|consensus
Probab=99.91 E-value=1.2e-22 Score=115.77 Aligned_cols=108 Identities=19% Similarity=0.337 Sum_probs=101.9
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRF 79 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~ 79 (116)
+.|++.+.++.|.+ + ..|++++.|.+..+||+++++++..|.+| .+.|.+++++| +++.+++++-|+..++
T Consensus 142 ~gHtgylScC~f~d-D-~~ilT~SGD~TCalWDie~g~~~~~f~GH------~gDV~slsl~p~~~ntFvSg~cD~~akl 213 (343)
T KOG0286|consen 142 AGHTGYLSCCRFLD-D-NHILTGSGDMTCALWDIETGQQTQVFHGH------TGDVMSLSLSPSDGNTFVSGGCDKSAKL 213 (343)
T ss_pred cCccceeEEEEEcC-C-CceEecCCCceEEEEEcccceEEEEecCC------cccEEEEecCCCCCCeEEecccccceee
Confidence 35889999999986 3 88999999999999999999999999999 78999999999 8999999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||++.+...+.+.+|+..|..++|.|+|.-|++||.|
T Consensus 214 WD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD 250 (343)
T KOG0286|consen 214 WDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDD 250 (343)
T ss_pred eeccCcceeEeecccccccceEEEccCCCeeeecCCC
Confidence 9999999999999999999999999999999999986
No 11
>KOG0279|consensus
Probab=99.90 E-value=2.2e-22 Score=113.99 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=101.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------- 50 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------- 50 (116)
|+-.|..+..++ ++++.++++.|+.+++||+.+++....|.+|...+
T Consensus 62 HsH~v~dv~~s~-dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~ 140 (315)
T KOG0279|consen 62 HSHFVSDVVLSS-DGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY 140 (315)
T ss_pred cceEecceEEcc-CCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE
Confidence 677789999999 89999999999999999999999888888886632
Q ss_pred -----CCCCceeEEEEcCC--CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 -----SGGGGINRVVCHPT--LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 -----~~~~~i~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.++.-|.+++|+|+ .+++++++.|+++++||+++-+....+.+|.+.++.+.++|||...++|+.|
T Consensus 141 t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkd 213 (315)
T KOG0279|consen 141 TIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKD 213 (315)
T ss_pred EEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCC
Confidence 33567999999998 6799999999999999999999999999999999999999999999999876
No 12
>KOG0291|consensus
Probab=99.89 E-value=5.1e-22 Score=124.65 Aligned_cols=107 Identities=18% Similarity=0.339 Sum_probs=87.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE-
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD- 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~- 81 (116)
|...+.+++++| +|+++++|++|++|++||...+-...+|..| ++.++.+.|+..+..+++.+.||+|+.||
T Consensus 349 H~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteH------ts~Vt~v~f~~~g~~llssSLDGtVRAwDl 421 (893)
T KOG0291|consen 349 HSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTFTEH------TSGVTAVQFTARGNVLLSSSLDGTVRAWDL 421 (893)
T ss_pred cccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEeccC------CCceEEEEEEecCCEEEEeecCCeEEeeee
Confidence 667899999999 8999999999999999999999999999888 44555555555555555555555555555
Q ss_pred -------------------------------------------CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 -------------------------------------------NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 -------------------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++|+++..+.+|+++|.+++|+|++..|+++|+|
T Consensus 422 kRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWD 499 (893)
T KOG0291|consen 422 KRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWD 499 (893)
T ss_pred cccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEecccc
Confidence 44467778888999999999999999999999997
No 13
>KOG0266|consensus
Probab=99.88 E-value=3.6e-21 Score=119.29 Aligned_cols=108 Identities=25% Similarity=0.401 Sum_probs=97.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|++++|+| .++.+++|+.|+.|++||+.+++.+..+.+| ...|.+++|++++.++++++.|+.|++||
T Consensus 244 gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~h------s~~is~~~f~~d~~~l~s~s~d~~i~vwd 316 (456)
T KOG0266|consen 244 GHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECVRKLKGH------SDGISGLAFSPDGNLLVSASYDGTIRVWD 316 (456)
T ss_pred CCCCceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEEEeeecc------CCceEEEEECCCCCEEEEcCCCccEEEEE
Confidence 5889999999999 6699999999999999999999999999999 67899999999999999999999999999
Q ss_pred CCCCe--EEEEeecccc--cEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGK--LVHSMVAHLD--AVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d 116 (116)
+.++. +...+..+.. .++.++|+|+++++++++.|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d 355 (456)
T KOG0266|consen 317 LETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD 355 (456)
T ss_pred CCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC
Confidence 99998 4566665544 48999999999999998765
No 14
>KOG0286|consensus
Probab=99.88 E-value=8.4e-21 Score=108.37 Aligned_cols=110 Identities=22% Similarity=0.382 Sum_probs=102.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|++-|.++.|.| +|.-+++|++|+..++||++..+++..+..... ...|++++|+..|++++++..|..+.+||
T Consensus 227 ghesDINsv~ffP-~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~----~~gitSv~FS~SGRlLfagy~d~~c~vWD 301 (343)
T KOG0286|consen 227 GHESDINSVRFFP-SGDAFATGSDDATCRLYDLRADQELAVYSHDSI----ICGITSVAFSKSGRLLFAGYDDFTCNVWD 301 (343)
T ss_pred ccccccceEEEcc-CCCeeeecCCCceeEEEeecCCcEEeeeccCcc----cCCceeEEEcccccEEEeeecCCceeEee
Confidence 3788899999999 899999999999999999999888888875533 56899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.-.++....+.+|..+|+++..+|||..++|||+|
T Consensus 302 tlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWD 336 (343)
T KOG0286|consen 302 TLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWD 336 (343)
T ss_pred ccccceEEEeeccCCeeEEEEECCCCcEEEecchh
Confidence 99899999999999999999999999999999987
No 15
>KOG0273|consensus
Probab=99.88 E-value=3.7e-21 Score=115.41 Aligned_cols=108 Identities=20% Similarity=0.389 Sum_probs=98.9
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC---------EEEEEe
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP---------LTITAH 72 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~ 72 (116)
.|.++|.++.|+| .+.+|++++.|++++||..........+..| +..|..+.|+|+++ .+++++
T Consensus 357 GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~H------skei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 357 GHHGEVNALKWNP-TGSLLASCSDDGTLKIWSMGQSNSVHDLQAH------SKEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred cccCceEEEEECC-CCceEEEecCCCeeEeeecCCCcchhhhhhh------ccceeeEeecCCCCccCCCcCCceEEEee
Confidence 4889999999999 8899999999999999998878888888888 66799999988543 688999
Q ss_pred CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.|++|++||++.+.++..+..|..+|++++|+|+|+++++|+.|
T Consensus 430 ~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~d 473 (524)
T KOG0273|consen 430 FDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLD 473 (524)
T ss_pred cCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCC
Confidence 99999999999999999998899999999999999999999876
No 16
>PTZ00420 coronin; Provisional
Probab=99.88 E-value=2.7e-20 Score=116.93 Aligned_cols=108 Identities=10% Similarity=0.086 Sum_probs=90.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--------eeEEEecCCcCcCCCCceeEEEEcCCCCE-EEEEe
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--------PVVRIDSSQFGVSGGGGINRVVCHPTLPL-TITAH 72 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~ 72 (116)
.|.+.|.+++|+|+++++|++++.|+.|++||+.++. ++..+.+| ...|.+++|+|++.. +++++
T Consensus 72 gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH------~~~V~sVaf~P~g~~iLaSgS 145 (568)
T PTZ00420 72 GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH------KKKISIIDWNPMNYYIMCSSG 145 (568)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC------CCcEEEEEECCCCCeEEEEEe
Confidence 3778999999999557899999999999999997542 23345666 678999999999874 57899
Q ss_pred CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.|+.|++||+++++....+. +...+.+++|+|+|++|++++.|
T Consensus 146 ~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D 188 (568)
T PTZ00420 146 FDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVG 188 (568)
T ss_pred CCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecC
Confidence 99999999999988777665 55679999999999999988765
No 17
>KOG0316|consensus
Probab=99.87 E-value=9.3e-21 Score=105.71 Aligned_cols=107 Identities=13% Similarity=0.240 Sum_probs=102.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
+.++|.++.|+- +|++.++++.++.+++|+...+..++++.+| ...|..++.+.|...+++++.|..+.+||+
T Consensus 16 ~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktYsgh------G~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 16 AQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTYSGH------GHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred cccceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeeecCC------CceeeeccccccccccccCCCCceEEEEEc
Confidence 678999999998 8999999999999999999999999999999 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+|+..+.+.+|.+.|..+.|+.+...+++|+.|
T Consensus 89 ~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD 122 (307)
T KOG0316|consen 89 NTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFD 122 (307)
T ss_pred ccCeeeeecccccceeeEEEecCcceEEEecccc
Confidence 9999999999999999999999999999999876
No 18
>KOG0319|consensus
Probab=99.87 E-value=8.3e-21 Score=118.74 Aligned_cols=108 Identities=13% Similarity=0.151 Sum_probs=102.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++.+| +...+++|+.|...++|+++..+.+..+.+| ...+.++.|+|....+++++.|.+|+||.
T Consensus 461 aHdKdIN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l~~vLsGH------~RGvw~V~Fs~~dq~laT~SgD~TvKIW~ 533 (775)
T KOG0319|consen 461 AHDKDINCVAIAP-NDKLIATGSQDKTAKIWDLEQLRLLGVLSGH------TRGVWCVSFSKNDQLLATCSGDKTVKIWS 533 (775)
T ss_pred hhcccccceEecC-CCceEEecccccceeeecccCceEEEEeeCC------ccceEEEEeccccceeEeccCCceEEEEE
Confidence 3788999999999 7799999999999999999988999999999 77899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+..+++++.+|...|....|-.+++.|++++.|
T Consensus 534 is~fSClkT~eGH~~aVlra~F~~~~~qliS~~ad 568 (775)
T KOG0319|consen 534 ISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGAD 568 (775)
T ss_pred eccceeeeeecCccceeEeeeeeeCCcEEEeccCC
Confidence 99999999999999999999999999999998865
No 19
>KOG0279|consensus
Probab=99.87 E-value=2.3e-20 Score=105.91 Aligned_cols=109 Identities=22% Similarity=0.288 Sum_probs=100.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-----CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-----TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
.|++.|+.++-.+.+.+.+++++.|..+.+|++. .|.+++.+++| +..|..+..++++.++++++.|+.
T Consensus 13 gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GH------sH~v~dv~~s~dg~~alS~swD~~ 86 (315)
T KOG0279|consen 13 GHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGH------SHFVSDVVLSSDGNFALSASWDGT 86 (315)
T ss_pred CCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeecc------ceEecceEEccCCceEEeccccce
Confidence 4789999999988678899999999999999875 46678999998 778999999999999999999999
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++||+.+++..+.+.+|...|.+++|++|.+.+++||.|
T Consensus 87 lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrD 126 (315)
T KOG0279|consen 87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRD 126 (315)
T ss_pred EEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCc
Confidence 9999999999999999999999999999999999999987
No 20
>KOG0285|consensus
Probab=99.87 E-value=3.1e-21 Score=112.91 Aligned_cols=108 Identities=18% Similarity=0.233 Sum_probs=102.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.++++.| ...++++|+.|+.+.|||+.+++...++.+| -..+..+++++..++++++++|+.|+.||
T Consensus 149 gHlgWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~LkltltGh------i~~vr~vavS~rHpYlFs~gedk~VKCwD 221 (460)
T KOG0285|consen 149 GHLGWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQLKLTLTGH------IETVRGVAVSKRHPYLFSAGEDKQVKCWD 221 (460)
T ss_pred hccceEEEEeeCC-CceeEEecCCCceeEEEEcccCeEEEeecch------hheeeeeeecccCceEEEecCCCeeEEEe
Confidence 3789999999999 7799999999999999999999999999999 56899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++..+.++.+.+|-..|.+++..|.-..|++++.|
T Consensus 222 Le~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grD 256 (460)
T KOG0285|consen 222 LEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRD 256 (460)
T ss_pred chhhhhHHHhccccceeEEEeccccceeEEecCCc
Confidence 99999999999999999999999999999999987
No 21
>KOG0315|consensus
Probab=99.86 E-value=9.9e-20 Score=102.26 Aligned_cols=113 Identities=18% Similarity=0.246 Sum_probs=92.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCc-------------------Cc-------------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF-------------------GV------------- 50 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~-------------------~~------------- 50 (116)
|++.|+++.|.- +++++++|++||.++|||++.....+.+..... +.
T Consensus 82 h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~ 160 (311)
T KOG0315|consen 82 HTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTH 160 (311)
T ss_pred cCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccc
Confidence 678899999988 889999999999999999875332222211110 00
Q ss_pred ----------------------------------------------------CCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 51 ----------------------------------------------------SGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 51 ----------------------------------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.|++.+....++|++++|++++.|.+++
T Consensus 161 ~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~ 240 (311)
T KOG0315|consen 161 ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVK 240 (311)
T ss_pred ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEE
Confidence 6777888899999999999999999999
Q ss_pred EEECCCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||+.++. +....+.+|...+.+.+|+.||++|+|++.|
T Consensus 241 iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd 279 (311)
T KOG0315|consen 241 IWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSD 279 (311)
T ss_pred EEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCC
Confidence 9999877 5566778888999999999999999999876
No 22
>PTZ00421 coronin; Provisional
Probab=99.85 E-value=2.5e-19 Score=111.63 Aligned_cols=106 Identities=19% Similarity=0.197 Sum_probs=92.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.+++|+|+..++|++++.|+.|++||+.+++.+..+.+| ...|.+++|+|++.++++++.|+.|++||+
T Consensus 124 H~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h------~~~V~sla~spdG~lLatgs~Dg~IrIwD~ 197 (493)
T PTZ00421 124 HTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCH------SDQITSLEWNLDGSLLCTTSKDKKLNIIDP 197 (493)
T ss_pred CCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCC------CCceEEEEEECCCCEEEEecCCCEEEEEEC
Confidence 67889999999954579999999999999999999888888887 668999999999999999999999999999
Q ss_pred CCCeEEEEeeccccc-EEEEEECCCCcEEEeee
Q psy17133 83 VSGKLVHSMVAHLDA-VTSLAVDPQGLYILSGT 114 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~s 114 (116)
++++.+..+..|.+. ...+.|.+++..+++++
T Consensus 198 rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G 230 (493)
T PTZ00421 198 RDGTIVSSVEAHASAKSQRCLWAKRKDLIITLG 230 (493)
T ss_pred CCCcEEEEEecCCCCcceEEEEcCCCCeEEEEe
Confidence 999988888877653 45678899888777654
No 23
>KOG0645|consensus
Probab=99.85 E-value=2.5e-19 Score=101.50 Aligned_cols=109 Identities=14% Similarity=0.195 Sum_probs=91.6
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce---eEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP---VVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 77 (116)
.|.+++..++|+|..|..|++++.|+.|++|+...+.. ...+ .+| ...|.+++|+|.|+++++++.|.++
T Consensus 12 gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~h------krsVRsvAwsp~g~~La~aSFD~t~ 85 (312)
T KOG0645|consen 12 GHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGH------KRSVRSVAWSPHGRYLASASFDATV 85 (312)
T ss_pred CCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccc------hheeeeeeecCCCcEEEEeeccceE
Confidence 36788999999993377999999999999999984322 2222 233 6789999999999999999999999
Q ss_pred EEEECCCC--eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 78 RFFDNVSG--KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.||.-..+ +++..+.+|...|.+++|+++|++||++++|
T Consensus 86 ~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRD 126 (312)
T KOG0645|consen 86 VIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRD 126 (312)
T ss_pred EEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCC
Confidence 99986543 5678889999999999999999999999986
No 24
>KOG0302|consensus
Probab=99.85 E-value=3.5e-20 Score=108.92 Aligned_cols=110 Identities=15% Similarity=0.234 Sum_probs=90.9
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
|.|+..|..++|+|.+...+++++-|+.|+|||++.+... ...+.| .+.|+.+.|+.+..+|++|++||+++
T Consensus 254 ~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh------~sDVNVISWnr~~~lLasG~DdGt~~ 327 (440)
T KOG0302|consen 254 TGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAH------NSDVNVISWNRREPLLASGGDDGTLS 327 (440)
T ss_pred cccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeecc------CCceeeEEccCCcceeeecCCCceEE
Confidence 3588999999999988889999999999999999977332 223556 67899999999888999999999999
Q ss_pred EEECCC---CeEEEEeecccccEEEEEECCC-CcEEEeeecC
Q psy17133 79 FFDNVS---GKLVHSMVAHLDAVTSLAVDPQ-GLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~---~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~s~d 116 (116)
|||+++ ++.+..+..|..+|+++.|+|. ...|++++.|
T Consensus 328 iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D 369 (440)
T KOG0302|consen 328 IWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGED 369 (440)
T ss_pred EEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCC
Confidence 999874 5667788899999999999994 4455555543
No 25
>KOG1407|consensus
Probab=99.85 E-value=3e-20 Score=104.80 Aligned_cols=114 Identities=13% Similarity=0.119 Sum_probs=98.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------- 50 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------- 50 (116)
|.+.|-.+.|.|...+.+++++.+..+++||...+++...........
T Consensus 63 h~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~ 142 (313)
T KOG1407|consen 63 HTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVN 142 (313)
T ss_pred CCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceee
Confidence 567788899998788899999999999999998887766554332211
Q ss_pred --------------------------------------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 51 --------------------------------------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 51 --------------------------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
.|+....++.|+|+|+++|+|+.|..+.+||++.--
T Consensus 143 ~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi 222 (313)
T KOG1407|consen 143 EEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELI 222 (313)
T ss_pred hhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhh
Confidence 677778899999999999999999999999999988
Q ss_pred EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 87 LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 87 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++.+..+.-+|+.++|+.+|++||++|.|
T Consensus 223 C~R~isRldwpVRTlSFS~dg~~lASaSED 252 (313)
T KOG1407|consen 223 CERCISRLDWPVRTLSFSHDGRMLASASED 252 (313)
T ss_pred hheeeccccCceEEEEeccCcceeeccCcc
Confidence 999998889999999999999999999987
No 26
>KOG0276|consensus
Probab=99.85 E-value=9.2e-21 Score=117.31 Aligned_cols=108 Identities=19% Similarity=0.287 Sum_probs=101.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~~ 80 (116)
|+-.|.+++|+|.+.+.+++++.|++|++|.+....+.+++++| ...|+++++-+ |.++++++++|..+++|
T Consensus 139 H~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gH------ekGVN~Vdyy~~gdkpylIsgaDD~tiKvW 212 (794)
T KOG0276|consen 139 HEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGH------EKGVNCVDYYTGGDKPYLISGADDLTIKVW 212 (794)
T ss_pred cceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeecc------ccCcceEEeccCCCcceEEecCCCceEEEe
Confidence 67789999999999999999999999999999988899999999 67899999986 45799999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|.++..+++++.+|..-|+.++|+|.-.++++||.|
T Consensus 213 DyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsED 248 (794)
T KOG0276|consen 213 DYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSED 248 (794)
T ss_pred ecchHHHHHHhhcccccceEEEecCCCcEEEEecCC
Confidence 999999999999999999999999999999999987
No 27
>KOG0295|consensus
Probab=99.85 E-value=1.7e-19 Score=105.52 Aligned_cols=108 Identities=17% Similarity=0.270 Sum_probs=97.4
Q ss_pred CCCCceEEEEccC--------------CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE
Q psy17133 3 YNGTPTSIDFVRD--------------ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT 68 (116)
Q Consensus 3 ~~~~v~~~~~~~~--------------~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (116)
|+-+|.+++|.|. .++++++++.|+.|++||+.++..+.++.+| .+-|..++|+|.|++|
T Consensus 276 hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~gh------dnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 276 HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGH------DNWVRGVAFSPGGKYI 349 (406)
T ss_pred cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecc------cceeeeeEEcCCCeEE
Confidence 4556777777663 1258899999999999999999999999999 6789999999999999
Q ss_pred EEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 69 ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 69 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++.+|+++++||+++++++..+..|..-++++.|..+..+++||+-|
T Consensus 350 ~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVd 397 (406)
T KOG0295|consen 350 LSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVD 397 (406)
T ss_pred EEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEecccc
Confidence 999999999999999999999999999999999999999999999865
No 28
>KOG0318|consensus
Probab=99.85 E-value=1.4e-19 Score=110.07 Aligned_cols=110 Identities=22% Similarity=0.388 Sum_probs=95.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|..-|.++.|+| +++++++.+.|+++++||-.+++.+..+... ..|.+.|..+.|+||+..+++++.|.++++||+
T Consensus 189 HskFV~~VRysP-DG~~Fat~gsDgki~iyDGktge~vg~l~~~---~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdV 264 (603)
T KOG0318|consen 189 HSKFVNCVRYSP-DGSRFATAGSDGKIYIYDGKTGEKVGELEDS---DAHKGSIFALSWSPDSTQFLTVSADKTIKIWDV 264 (603)
T ss_pred cccceeeEEECC-CCCeEEEecCCccEEEEcCCCccEEEEecCC---CCccccEEEEEECCCCceEEEecCCceEEEEEe
Confidence 667899999999 7999999999999999999999999999832 123789999999999999999999999999998
Q ss_pred CCC-------------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSG-------------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~-------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+. ..++.+.+|...|+++..+|++++|++++.|
T Consensus 265 s~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyD 341 (603)
T KOG0318|consen 265 STNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYD 341 (603)
T ss_pred eccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccC
Confidence 764 2334455778889999999999999999876
No 29
>KOG0283|consensus
Probab=99.84 E-value=1.7e-20 Score=118.16 Aligned_cols=112 Identities=15% Similarity=0.237 Sum_probs=90.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-----------------------eE----EEecC--------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-----------------------VV----RIDSS-------- 46 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-----------------------~~----~~~~~-------- 46 (116)
.|.+.|.++.|++ +|++|++|++|+.|+||.+...+. .. .....
T Consensus 265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 4789999999999 899999999999999998754000 00 00000
Q ss_pred -Cc------------------CcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECC-C
Q psy17133 47 -QF------------------GVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-Q 106 (116)
Q Consensus 47 -~~------------------~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 106 (116)
.+ ..+|...|..+.|+.++ +|++++.|.++++|++...+++..+. |..-|++++|+| |
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVD 421 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccC
Confidence 00 01778899999999865 78899999999999999999999997 889999999999 8
Q ss_pred CcEEEeeecC
Q psy17133 107 GLYILSGTYQ 116 (116)
Q Consensus 107 ~~~l~~~s~d 116 (116)
.++|++||.|
T Consensus 422 DryFiSGSLD 431 (712)
T KOG0283|consen 422 DRYFISGSLD 431 (712)
T ss_pred CCcEeecccc
Confidence 8999999987
No 30
>KOG0292|consensus
Probab=99.84 E-value=5.3e-20 Score=117.74 Aligned_cols=108 Identities=19% Similarity=0.267 Sum_probs=103.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
-|.|+|.++.|+| ....+++|++|..|++|+..+.+.+.++.+| -..|..+.|++.-++++++++|-+|+||+
T Consensus 49 eHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrclftL~GH------lDYVRt~~FHheyPWIlSASDDQTIrIWN 121 (1202)
T KOG0292|consen 49 EHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCLFTLLGH------LDYVRTVFFHHEYPWILSASDDQTIRIWN 121 (1202)
T ss_pred ccCCccceeeecC-CCCeEEecCCccEEEEEecccceehhhhccc------cceeEEeeccCCCceEEEccCCCeEEEEe
Confidence 3889999999999 7899999999999999999999999999999 66899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.++++++..+.+|..-|.+..|+|....++++|.|
T Consensus 122 wqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLD 156 (1202)
T KOG0292|consen 122 WQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLD 156 (1202)
T ss_pred ccCCceEEEEecCceEEEeeccCCccceEEEeccc
Confidence 99999999999999999999999999999999976
No 31
>KOG0319|consensus
Probab=99.84 E-value=6.2e-20 Score=114.92 Aligned_cols=108 Identities=15% Similarity=0.137 Sum_probs=102.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...+.++.|+| ..+.+++++.|.+|+||.+.+...+++|.+| .+.|..+.|-.+++.+++++.||.+++|+
T Consensus 503 GH~RGvw~V~Fs~-~dq~laT~SgD~TvKIW~is~fSClkT~eGH------~~aVlra~F~~~~~qliS~~adGliKlWn 575 (775)
T KOG0319|consen 503 GHTRGVWCVSFSK-NDQLLATCSGDKTVKIWSISTFSCLKTFEGH------TSAVLRASFIRNGKQLISAGADGLIKLWN 575 (775)
T ss_pred CCccceEEEEecc-ccceeEeccCCceEEEEEeccceeeeeecCc------cceeEeeeeeeCCcEEEeccCCCcEEEEe
Confidence 3778899999999 7799999999999999999999999999999 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++++.++..|...|++++-+|...+++||+.|
T Consensus 576 ikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~D 610 (775)
T KOG0319|consen 576 IKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGD 610 (775)
T ss_pred ccchhhhhhhhhccceeEEEeecCccceeEecCCC
Confidence 99999999999999999999999999999998876
No 32
>KOG0303|consensus
Probab=99.84 E-value=4.6e-20 Score=109.02 Aligned_cols=108 Identities=16% Similarity=0.280 Sum_probs=97.6
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeC
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHD 73 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 73 (116)
.|.++|..++|+|.+.+.|++|++|.+|.+|.+..+ +++..+.+| ...|.-+.|+|. ...|++++.
T Consensus 79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH------~rrVg~V~wHPtA~NVLlsag~ 152 (472)
T KOG0303|consen 79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGH------QRRVGLVQWHPTAPNVLLSAGS 152 (472)
T ss_pred CccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeec------ceeEEEEeecccchhhHhhccC
Confidence 388999999999988899999999999999998754 356778888 778999999997 568999999
Q ss_pred CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+.|.+|++.+|+.+-.+. |...|.+++|+.+|..|+|++.|
T Consensus 153 Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckD 194 (472)
T KOG0303|consen 153 DNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKD 194 (472)
T ss_pred CceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeeccc
Confidence 9999999999999988887 99999999999999999999886
No 33
>KOG0285|consensus
Probab=99.84 E-value=1.1e-19 Score=106.46 Aligned_cols=107 Identities=22% Similarity=0.335 Sum_probs=100.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|++++..| .-+.|++++.|..+++||+++...+..+.+| ...|..+.+.|....+++++.|++|++||+
T Consensus 234 HlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH------~~~V~~V~~~~~dpqvit~S~D~tvrlWDl 306 (460)
T KOG0285|consen 234 HLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGH------TNPVASVMCQPTDPQVITGSHDSTVRLWDL 306 (460)
T ss_pred ccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCC------CCcceeEEeecCCCceEEecCCceEEEeee
Confidence 678899999999 7799999999999999999999999999999 778999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
..|+....+..|...+++++.+|....++++|.|
T Consensus 307 ~agkt~~tlt~hkksvral~lhP~e~~fASas~d 340 (460)
T KOG0285|consen 307 RAGKTMITLTHHKKSVRALCLHPKENLFASASPD 340 (460)
T ss_pred ccCceeEeeecccceeeEEecCCchhhhhccCCc
Confidence 9999999999899999999999999999998875
No 34
>KOG0645|consensus
Probab=99.84 E-value=6.9e-19 Score=99.72 Aligned_cols=108 Identities=13% Similarity=0.199 Sum_probs=96.9
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
.|...|..++|+| .+++|++++-|..+.||...++ +.+..+++| .+.|.+++|+++|.+||+++.|+.+.+
T Consensus 59 ~hkrsVRsvAwsp-~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGH------EnEVK~Vaws~sG~~LATCSRDKSVWi 131 (312)
T KOG0645|consen 59 GHKRSVRSVAWSP-HGRYLASASFDATVVIWKKEDGEFECVATLEGH------ENEVKCVAWSASGNYLATCSRDKSVWI 131 (312)
T ss_pred cchheeeeeeecC-CCcEEEEeeccceEEEeecCCCceeEEeeeecc------ccceeEEEEcCCCCEEEEeeCCCeEEE
Confidence 3778899999999 8899999999999999988754 567888999 789999999999999999999999999
Q ss_pred EECCCC---eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSG---KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|.+..+ ++...+..|.+.|..+.|+|....|+++|.|
T Consensus 132 We~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYD 171 (312)
T KOG0645|consen 132 WEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYD 171 (312)
T ss_pred EEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccC
Confidence 998743 4567788999999999999999999999986
No 35
>KOG0973|consensus
Probab=99.83 E-value=1.8e-19 Score=116.22 Aligned_cols=107 Identities=17% Similarity=0.305 Sum_probs=96.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-------C-----------ceeEEEecCCcCcCCCCceeEEEEcCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-------G-----------KPVVRIDSSQFGVSGGGGINRVVCHPT 64 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-------~-----------~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (116)
|.+.|.|+.|+| +|.+|++|++|+.+.+|.... + +....+.+| .+.|..++|+|+
T Consensus 68 h~~sv~CVR~S~-dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H------~~DV~Dv~Wsp~ 140 (942)
T KOG0973|consen 68 HDGSVNCVRFSP-DGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGH------DSDVLDVNWSPD 140 (942)
T ss_pred ccCceeEEEECC-CCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecC------CCccceeccCCC
Confidence 789999999999 899999999999999999772 0 133445555 789999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 65 LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.++++++.|++|.+|+.++.+.+..+.+|...|..+.|+|-|++|++-+.|
T Consensus 141 ~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD 192 (942)
T KOG0973|consen 141 DSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDD 192 (942)
T ss_pred ccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCC
Confidence 9999999999999999999999999999999999999999999999998876
No 36
>KOG0295|consensus
Probab=99.83 E-value=9.6e-19 Score=102.42 Aligned_cols=113 Identities=19% Similarity=0.247 Sum_probs=99.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------- 50 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------- 50 (116)
|.-.|.++.|-| .++++++++.|..++.|++.++..+..|.+|...+
T Consensus 192 h~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k 270 (406)
T KOG0295|consen 192 HEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCK 270 (406)
T ss_pred cccceeeEEEEe-cCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhh
Confidence 566788999999 78999999999999999999998888888876632
Q ss_pred ----CCCCceeEEEEcCC---------------CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 51 ----SGGGGINRVVCHPT---------------LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 51 ----~~~~~i~~~~~~~~---------------~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
.|+..+.+++|.|. +.++.+++.|++|++||+.++.++.++.+|...|..++|+|.|++|+
T Consensus 271 ~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ 350 (406)
T KOG0295|consen 271 AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYIL 350 (406)
T ss_pred hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEE
Confidence 66777888888761 24888999999999999999999999999999999999999999999
Q ss_pred eeecC
Q psy17133 112 SGTYQ 116 (116)
Q Consensus 112 ~~s~d 116 (116)
++..|
T Consensus 351 ScaDD 355 (406)
T KOG0295|consen 351 SCADD 355 (406)
T ss_pred EEecC
Confidence 98876
No 37
>KOG0643|consensus
Probab=99.83 E-value=5.1e-19 Score=100.26 Aligned_cols=115 Identities=21% Similarity=0.291 Sum_probs=98.2
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------------------------
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------ 50 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------ 50 (116)
+.|.+.|.+++.+- +.+.+++|+.|..+++||+++|+++..++......
T Consensus 49 ~GHtGavW~~Did~-~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi 127 (327)
T KOG0643|consen 49 DGHTGAVWCCDIDW-DSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDI 127 (327)
T ss_pred cCCCceEEEEEecC-CcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEc
Confidence 46899999999987 78999999999999999999999887766443310
Q ss_pred -----------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE-EEeecccccEEEEEECCCCcEEEe
Q psy17133 51 -----------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV-HSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 51 -----------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.+...++.+-|.|-++.+++|.++|.|..||.++|+.+ .....|...|++++++||..+++|
T Consensus 128 ~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT 207 (327)
T KOG0643|consen 128 RDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFIT 207 (327)
T ss_pred cCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEe
Confidence 44467888999999999999999999999999998654 445678889999999999999999
Q ss_pred eecC
Q psy17133 113 GTYQ 116 (116)
Q Consensus 113 ~s~d 116 (116)
+|.|
T Consensus 208 ~s~D 211 (327)
T KOG0643|consen 208 GSKD 211 (327)
T ss_pred cccC
Confidence 9987
No 38
>KOG0284|consensus
Probab=99.83 E-value=3.1e-20 Score=109.92 Aligned_cols=107 Identities=18% Similarity=0.178 Sum_probs=97.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.++.|++ ++.++++|..++.|++|+.+ .+.+..+..+. ...|.+++|+|+...++++++|++|+|||.
T Consensus 137 HDs~Vr~m~ws~-~g~wmiSgD~gG~iKyWqpn-mnnVk~~~ahh-----~eaIRdlafSpnDskF~t~SdDg~ikiWdf 209 (464)
T KOG0284|consen 137 HDSPVRTMKWSH-NGTWMISGDKGGMIKYWQPN-MNNVKIIQAHH-----AEAIRDLAFSPNDSKFLTCSDDGTIKIWDF 209 (464)
T ss_pred hcccceeEEEcc-CCCEEEEcCCCceEEecccc-hhhhHHhhHhh-----hhhhheeccCCCCceeEEecCCCeEEEEec
Confidence 788999999999 89999999999999999987 55566776662 367999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
...+..+.+.+|...|.++.|+|....++++|.|
T Consensus 210 ~~~kee~vL~GHgwdVksvdWHP~kgLiasgskD 243 (464)
T KOG0284|consen 210 RMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKD 243 (464)
T ss_pred cCCchhheeccCCCCcceeccCCccceeEEccCC
Confidence 9888888899999999999999999999999986
No 39
>KOG0275|consensus
Probab=99.82 E-value=5e-21 Score=111.33 Aligned_cols=109 Identities=20% Similarity=0.308 Sum_probs=102.7
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
|-+..+|.|+.|+. +..++++|+.||+|++|.+.+|+.++.|. .| ...++++.|+.|+..+.+++.|.++++
T Consensus 260 MMmd~aVlci~FSR-DsEMlAsGsqDGkIKvWri~tG~ClRrFdrAH------tkGvt~l~FSrD~SqiLS~sfD~tvRi 332 (508)
T KOG0275|consen 260 MMMDDAVLCISFSR-DSEMLASGSQDGKIKVWRIETGQCLRRFDRAH------TKGVTCLSFSRDNSQILSASFDQTVRI 332 (508)
T ss_pred eecccceEEEeecc-cHHHhhccCcCCcEEEEEEecchHHHHhhhhh------ccCeeEEEEccCcchhhcccccceEEE
Confidence 55788999999999 88999999999999999999999999997 56 678999999999999999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.-+++|+.++.+++|...|+...|.++|..++++|.|
T Consensus 333 HGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsD 369 (508)
T KOG0275|consen 333 HGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSD 369 (508)
T ss_pred eccccchhHHHhcCccccccceEEcCCCCeEEEecCC
Confidence 9999999999999999999999999999999999876
No 40
>PTZ00420 coronin; Provisional
Probab=99.82 E-value=3.1e-18 Score=107.86 Aligned_cols=107 Identities=16% Similarity=0.145 Sum_probs=87.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|+|+....+++++.|+.|++||+.+++.+..+.. ...+.+++|+|+|.++++++.|+.|++||+
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------~~~V~SlswspdG~lLat~s~D~~IrIwD~ 196 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------PKKLSSLKWNIKGNLLSGTCVGKHMHIIDP 196 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-------CCcEEEEEECCCCCEEEEEecCCEEEEEEC
Confidence 6778999999994334567889999999999998887766653 356999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEE-----EEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTS-----LAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~s~d 116 (116)
++++.+..+.+|.+.+.. ..|++++.+|++++.|
T Consensus 197 Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d 235 (568)
T PTZ00420 197 RKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFS 235 (568)
T ss_pred CCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcC
Confidence 999999888888765432 2356888998887653
No 41
>KOG0283|consensus
Probab=99.82 E-value=2.3e-19 Score=113.18 Aligned_cols=106 Identities=13% Similarity=0.155 Sum_probs=91.8
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRF 79 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~ 79 (116)
+.|.+.|.++.|+.+ ++|++++.|.+|++|++...+.+..|... ..|+|++|+| |.+++++|+-|+.++|
T Consensus 366 ~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~~~~~CL~~F~Hn-------dfVTcVaFnPvDDryFiSGSLD~KvRi 436 (712)
T KOG0283|consen 366 KGHTADILDLSWSKN--NFLLSSSMDKTVRLWHPGRKECLKVFSHN-------DFVTCVAFNPVDDRYFISGSLDGKVRL 436 (712)
T ss_pred hccchhheecccccC--CeeEeccccccEEeecCCCcceeeEEecC-------CeeEEEEecccCCCcEeecccccceEE
Confidence 358999999999973 89999999999999999988899988654 6799999999 5789999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++...+...-.. -...|++++|.|+|+..+.|+.+
T Consensus 437 WsI~d~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~ 472 (712)
T KOG0283|consen 437 WSISDKKVVDWND-LRDLITAVCYSPDGKGAVIGTFN 472 (712)
T ss_pred eecCcCeeEeehh-hhhhheeEEeccCCceEEEEEec
Confidence 9998777665444 34679999999999999988753
No 42
>KOG0273|consensus
Probab=99.81 E-value=1.3e-18 Score=104.70 Aligned_cols=106 Identities=18% Similarity=0.303 Sum_probs=94.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
-+..|++++|+. +|..|++|+.+|.+++|+.. |..+..+..| .++|.++.|+.+|.++++++.|+++.+||.
T Consensus 234 ~nkdVT~L~Wn~-~G~~LatG~~~G~~riw~~~-G~l~~tl~~H------kgPI~slKWnk~G~yilS~~vD~ttilwd~ 305 (524)
T KOG0273|consen 234 SNKDVTSLDWNN-DGTLLATGSEDGEARIWNKD-GNLISTLGQH------KGPIFSLKWNKKGTYILSGGVDGTTILWDA 305 (524)
T ss_pred ccCCcceEEecC-CCCeEEEeecCcEEEEEecC-chhhhhhhcc------CCceEEEEEcCCCCEEEeccCCccEEEEec
Confidence 456799999998 89999999999999999975 7788888888 789999999999999999999999999998
Q ss_pred CCC-----------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSG-----------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~-----------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.++ ++..++.+|.+.|.++.|+|.++.|+++|.|
T Consensus 306 ~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD 380 (524)
T KOG0273|consen 306 HTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDD 380 (524)
T ss_pred cCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCC
Confidence 654 2445566788999999999999999999987
No 43
>KOG0282|consensus
Probab=99.81 E-value=8e-20 Score=109.87 Aligned_cols=108 Identities=23% Similarity=0.253 Sum_probs=99.7
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRF 79 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~ 79 (116)
|.|..+|.++.|++ ++..+++++-|+.+++||+++|+.+..|... ..+.++.++|++ ..+++|+.|+.|+.
T Consensus 255 ~gH~k~Vrd~~~s~-~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~-------~~~~cvkf~pd~~n~fl~G~sd~ki~~ 326 (503)
T KOG0282|consen 255 KGHRKPVRDASFNN-CGTSFLSASFDRFLKLWDTETGQVLSRFHLD-------KVPTCVKFHPDNQNIFLVGGSDKKIRQ 326 (503)
T ss_pred hcchhhhhhhhccc-cCCeeeeeecceeeeeeccccceEEEEEecC-------CCceeeecCCCCCcEEEEecCCCcEEE
Confidence 56889999999999 8899999999999999999999999999765 468999999997 78899999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||+++++.++.+..|-+.+..+.|-++++.+++.+.|
T Consensus 327 wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDd 363 (503)
T KOG0282|consen 327 WDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDD 363 (503)
T ss_pred EeccchHHHHHHHhhhhheeeeEEccCCceEeeeccC
Confidence 9999999999888899999999999999999998875
No 44
>KOG0289|consensus
Probab=99.81 E-value=4e-18 Score=101.90 Aligned_cols=110 Identities=13% Similarity=0.193 Sum_probs=98.6
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.++|+.+..+| .++++++++.++...+.|.+++..+........ .-.+++..|+|||.++.++..|+.+++||
T Consensus 301 ~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s----~v~~ts~~fHpDgLifgtgt~d~~vkiwd 375 (506)
T KOG0289|consen 301 PHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVSDETS----DVEYTSAAFHPDGLIFGTGTPDGVVKIWD 375 (506)
T ss_pred cccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEeeccc----cceeEEeeEcCCceEEeccCCCceEEEEE
Confidence 5889999999999 899999999999999999999987766544311 34689999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++......+.+|.++|..++|+.+|=||++++.|
T Consensus 376 lks~~~~a~Fpght~~vk~i~FsENGY~Lat~add 410 (506)
T KOG0289|consen 376 LKSQTNVAKFPGHTGPVKAISFSENGYWLATAADD 410 (506)
T ss_pred cCCccccccCCCCCCceeEEEeccCceEEEEEecC
Confidence 99998888999999999999999999999999876
No 45
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.80 E-value=1.4e-17 Score=96.49 Aligned_cols=107 Identities=22% Similarity=0.362 Sum_probs=95.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.++|.++.|+| +++.+++++.++.+++|+..+++....+..+ ...+..+.|.|+++.+++++.++.+++|+
T Consensus 7 ~h~~~i~~~~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~~~~i~i~~ 79 (289)
T cd00200 7 GHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTLKGH------TGPVRDVAASADGTYLASGSSDKTIRLWD 79 (289)
T ss_pred ccCCCEEEEEEcC-CCCEEEEeecCcEEEEEEeeCCCcEEEEecC------CcceeEEEECCCCCEEEEEcCCCeEEEEE
Confidence 4789999999999 7899999999999999999988777777777 56788999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+.+++.+..+..+...+.++.|+|+++++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 113 (289)
T cd00200 80 LETGECVRTLTGHTSYVSSVAFSPDGRILSSSSR 113 (289)
T ss_pred cCcccceEEEeccCCcEEEEEEcCCCCEEEEecC
Confidence 9988888888888888999999999888888763
No 46
>KOG0289|consensus
Probab=99.80 E-value=2e-18 Score=103.16 Aligned_cols=103 Identities=19% Similarity=0.224 Sum_probs=92.4
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
+++.+|+| +|..+.+|..|+.+++||+..+..+..|.+| .+.|..+.|+.+|.+++++++|+.|++||++.-+
T Consensus 350 ~ts~~fHp-DgLifgtgt~d~~vkiwdlks~~~~a~Fpgh------t~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~ 422 (506)
T KOG0289|consen 350 YTSAAFHP-DGLIFGTGTPDGVVKIWDLKSQTNVAKFPGH------TGPVKAISFSENGYWLATAADDGSVKLWDLRKLK 422 (506)
T ss_pred eEEeeEcC-CceEEeccCCCceEEEEEcCCccccccCCCC------CCceeEEEeccCceEEEEEecCCeEEEEEehhhc
Confidence 68899999 8899999999999999999999899999999 7899999999999999999999999999999877
Q ss_pred EEEEeecc-cccEEEEEECCCCcEEEeeecC
Q psy17133 87 LVHSMVAH-LDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 87 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d 116 (116)
..+++... ...+.++.|.+.|.+|+.++.|
T Consensus 423 n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~ 453 (506)
T KOG0289|consen 423 NFKTIQLDEKKEVNSLSFDQSGTYLGIAGSD 453 (506)
T ss_pred ccceeeccccccceeEEEcCCCCeEEeecce
Confidence 77766532 3478999999999999988754
No 47
>KOG0269|consensus
Probab=99.80 E-value=4.6e-19 Score=111.67 Aligned_cols=108 Identities=18% Similarity=0.268 Sum_probs=96.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~ 81 (116)
|+..+..+.|++...++|++|++|+.|++||++..+...++.+. ...|..+.|+|. +..++++.+.|.+.+||
T Consensus 132 H~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~n------SESiRDV~fsp~~~~~F~s~~dsG~lqlWD 205 (839)
T KOG0269|consen 132 HERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSN------SESIRDVKFSPGYGNKFASIHDSGYLQLWD 205 (839)
T ss_pred hccceeeeeeccCCccEEEecCCCceEEEEeeeccccccccccc------chhhhceeeccCCCceEEEecCCceEEEee
Confidence 77889999999988899999999999999999988878888776 567999999996 67899999999999999
Q ss_pred CCC-CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVS-GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++. .+...++..|.+.|.++.|+|++.+|||||.|
T Consensus 206 lRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRD 241 (839)
T KOG0269|consen 206 LRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRD 241 (839)
T ss_pred ccCchhHHHHhhcccCceEEEeecCCCceeeecCCC
Confidence 974 45567788899999999999999999999987
No 48
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.80 E-value=1.3e-17 Score=96.64 Aligned_cols=107 Identities=29% Similarity=0.461 Sum_probs=94.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.+.++.|+| +++.+++++.++.+++||...++.+..+..+ ...+.++.++|++.++++++.++.+++|++
T Consensus 176 ~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~ 248 (289)
T cd00200 176 HTGEVNSVAFSP-DGEKLLSSSSDGTIKLWDLSTGKCLGTLRGH------ENGVNSVAFSPDGYLLASGSEDGTIRVWDL 248 (289)
T ss_pred CccccceEEECC-CcCEEEEecCCCcEEEEECCCCceecchhhc------CCceEEEEEcCCCcEEEEEcCCCcEEEEEc
Confidence 456799999999 7778888888999999999988888887666 568999999999888888888999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++....+..|...+..++|+|++++|++++.|
T Consensus 249 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 282 (289)
T cd00200 249 RTGECVQTLSGHTNSVTSLAWSPDGKRLASGSAD 282 (289)
T ss_pred CCceeEEEccccCCcEEEEEECCCCCEEEEecCC
Confidence 9888888888888899999999999999998865
No 49
>KOG0278|consensus
Probab=99.80 E-value=8.8e-18 Score=94.77 Aligned_cols=114 Identities=18% Similarity=0.267 Sum_probs=95.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------- 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------- 50 (116)
.|++.|..+.|.. +.+.++++..++.|++||..++..+..+.......
T Consensus 141 ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lK 219 (334)
T KOG0278|consen 141 GHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLK 219 (334)
T ss_pred CCCCcceeEEEec-cCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEecccccccee
Confidence 3788999999998 67888988999999999999998877665432210
Q ss_pred --CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 --SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM-VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 --~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.-+..|.+..++|+...+++|++|+.++.||..+++.+..+ ++|-++|.++.|+|+|...++||.|
T Consensus 220 s~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSED 288 (334)
T KOG0278|consen 220 SYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSED 288 (334)
T ss_pred eccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCC
Confidence 22345677888898888999999999999999999998886 7899999999999999999999987
No 50
>KOG0318|consensus
Probab=99.80 E-value=7.1e-18 Score=102.83 Aligned_cols=109 Identities=20% Similarity=0.205 Sum_probs=96.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|.+++|-|...-.++++++|..+.+|+-..-+....+..| ...|.+++++|||..+++.+.|+++.+||
T Consensus 145 GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~H------skFV~~VRysPDG~~Fat~gsDgki~iyD 218 (603)
T KOG0318|consen 145 GHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREH------SKFVNCVRYSPDGSRFATAGSDGKIYIYD 218 (603)
T ss_pred ccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeeccccc------ccceeeEEECCCCCeEEEecCCccEEEEc
Confidence 377889999999966668999999999999986655555566666 67899999999999999999999999999
Q ss_pred CCCCeEEEEee---cccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
-++++.+..+. +|.+.|..++|+||+..++|+|.|
T Consensus 219 Gktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 219 GKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred CCCccEEEEecCCCCccccEEEEEECCCCceEEEecCC
Confidence 99999999987 899999999999999999999876
No 51
>KOG0647|consensus
Probab=99.79 E-value=3.6e-18 Score=98.14 Aligned_cols=107 Identities=15% Similarity=0.253 Sum_probs=87.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEE-EecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVR-IDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.+..|.+++|+|....+++.++-|++|++|++.. +..+.. ...+ .+++.+++|+.+|..+++++.|+.+++|
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~------~~PvL~v~WsddgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSH------DGPVLDVCWSDDGSKVFSGGCDKQAKLW 99 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhcc------CCCeEEEEEccCCceEEeeccCCceEEE
Confidence 4678999999996556777889999999999975 343322 2233 6789999999999999999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCc--EEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGL--YILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~s~d 116 (116)
|+.+++ ..++..|.++|..+.|-+... .|+|||+|
T Consensus 100 DL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWD 136 (347)
T KOG0647|consen 100 DLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWD 136 (347)
T ss_pred EccCCC-eeeeeecccceeEEEEecCCCcceeEecccc
Confidence 999985 455667999999999976554 89999987
No 52
>KOG0293|consensus
Probab=99.79 E-value=1.6e-18 Score=103.19 Aligned_cols=107 Identities=14% Similarity=0.162 Sum_probs=93.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
|...|.-+.|++ +|++|++++.|.+..+|.+..-. ..+++.+| ..+|..+.|+||.+++++++.+..+.+
T Consensus 223 htdEVWfl~FS~-nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh------~~~V~yi~wSPDdryLlaCg~~e~~~l 295 (519)
T KOG0293|consen 223 HTDEVWFLQFSH-NGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGH------SQPVSYIMWSPDDRYLLACGFDEVLSL 295 (519)
T ss_pred CCCcEEEEEEcC-CCeeEeeccCCceEEEEEEecCcceeeeeeeecc------cCceEEEEECCCCCeEEecCchHheee
Confidence 678899999999 99999999999999999886433 36677777 678999999999999999999999999
Q ss_pred EECCCCeEEEEeec-ccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVA-HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||..+|.+...+.. +...+.+.+|.|||..+++|+.|
T Consensus 296 wDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d 333 (519)
T KOG0293|consen 296 WDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD 333 (519)
T ss_pred ccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCC
Confidence 99999999887763 35688999999999999999875
No 53
>KOG0265|consensus
Probab=99.79 E-value=7.9e-18 Score=96.61 Aligned_cols=108 Identities=18% Similarity=0.231 Sum_probs=93.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.|.+.|+.+.|+| ++..+++++.|..|.+|+.. +.+....+++| .+.|..+.|.+|++.+++++.|.+++.|
T Consensus 45 gh~geI~~~~F~P-~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgH------sgAVM~l~~~~d~s~i~S~gtDk~v~~w 117 (338)
T KOG0265|consen 45 GHKGEIYTIKFHP-DGSCFASGGSDRAIVLWNVYGDCENFWVLKGH------SGAVMELHGMRDGSHILSCGTDKTVRGW 117 (338)
T ss_pred CCcceEEEEEECC-CCCeEeecCCcceEEEEeccccccceeeeccc------cceeEeeeeccCCCEEEEecCCceEEEE
Confidence 3789999999999 89999999999999999965 44556677788 7899999999999999999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCcEEE-eeecC
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL-SGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~s~d 116 (116)
|.++|+..+.++.|...+..+.-+.-|..|+ +++.|
T Consensus 118 D~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD 154 (338)
T KOG0265|consen 118 DAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDD 154 (338)
T ss_pred ecccceeeehhccccceeeecCccccCCeEEEecCCC
Confidence 9999999999999999898887555566555 55443
No 54
>KOG0282|consensus
Probab=99.79 E-value=5e-19 Score=106.51 Aligned_cols=108 Identities=10% Similarity=0.138 Sum_probs=95.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.|+..|.++.|.|..+.++++++.|+.|++|++-+ ++.+.+|.+| ...|..++|+++|..+.+++-|+.+++|
T Consensus 212 gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH------~k~Vrd~~~s~~g~~fLS~sfD~~lKlw 285 (503)
T KOG0282|consen 212 GHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGH------RKPVRDASFNNCGTSFLSASFDRFLKLW 285 (503)
T ss_pred CCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcc------hhhhhhhhccccCCeeeeeecceeeeee
Confidence 37888999999997788999999999999999975 8889999999 6789999999999999999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d 116 (116)
|.++|+++..+. ....+.++.|.|++ +.+++|+.|
T Consensus 286 DtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd 321 (503)
T KOG0282|consen 286 DTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSD 321 (503)
T ss_pred ccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCC
Confidence 999999999886 34567899999988 667776654
No 55
>KOG0276|consensus
Probab=99.79 E-value=5.6e-18 Score=105.25 Aligned_cols=106 Identities=23% Similarity=0.347 Sum_probs=96.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
.-+|.+..|-+ ..+++++|++|.+|++|+..+++.+..|+.| +..|.+++.+|..+++.++++|-.|++||.+
T Consensus 55 ~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt~ekV~~FeAH------~DyIR~iavHPt~P~vLtsSDDm~iKlW~we 127 (794)
T KOG0276|consen 55 EVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGEKVKTFEAH------SDYIRSIAVHPTLPYVLTSSDDMTIKLWDWE 127 (794)
T ss_pred ccchhhheeee-ccceEEEecCCceEEEEecccceeeEEeecc------ccceeeeeecCCCCeEEecCCccEEEEeecc
Confidence 34677888888 7899999999999999999999999999999 6789999999999999999999999999998
Q ss_pred CCe-EEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 84 SGK-LVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 84 ~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
..- +.+++.+|..-|..++|+| |.+.++++|.|
T Consensus 128 ~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLD 162 (794)
T KOG0276|consen 128 NEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLD 162 (794)
T ss_pred CceeeeeEEcCcceEEEEEEecCCCccceeeeecc
Confidence 664 4677889999999999999 67899999876
No 56
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.79 E-value=3.8e-17 Score=91.35 Aligned_cols=100 Identities=17% Similarity=0.322 Sum_probs=79.3
Q ss_pred CCCCceEEEEccCCCcEEEE--eeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeE
Q psy17133 3 YNGTPTSIDFVRDESTKMVT--AFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHI 77 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~--~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i 77 (116)
..++|.+++|+| +++.+++ |..+..+.+||.. ++.+..+... .++.+.|+|+|++++.++. .|.+
T Consensus 58 ~~~~I~~~~WsP-~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~~--------~~n~i~wsP~G~~l~~~g~~n~~G~l 127 (194)
T PF08662_consen 58 KEGPIHDVAWSP-NGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGTQ--------PRNTISWSPDGRFLVLAGFGNLNGDL 127 (194)
T ss_pred CCCceEEEEECc-CCCEEEEEEccCCcccEEEcCc-ccEeEeecCC--------CceEEEECCCCCEEEEEEccCCCcEE
Confidence 346799999999 6676544 3456799999996 6677776533 5788999999999998764 4679
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.+||.++.+.+.... | ..+..++|+|+|++|++++
T Consensus 128 ~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~ 162 (194)
T PF08662_consen 128 EFWDVRKKKKISTFE-H-SDATDVEWSPDGRYLATAT 162 (194)
T ss_pred EEEECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEE
Confidence 999999888887765 3 3478999999999999875
No 57
>KOG0643|consensus
Probab=99.79 E-value=2.8e-17 Score=93.35 Aligned_cols=106 Identities=18% Similarity=0.163 Sum_probs=97.4
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
+.|+.+++.+.|+. +|++|.+++.|....+|-...|+.+.++.+| ++.|++++++-+.+.+++++.|.++++|
T Consensus 7 ~GHERplTqiKyN~-eGDLlFscaKD~~~~vw~s~nGerlGty~GH------tGavW~~Did~~s~~liTGSAD~t~kLW 79 (327)
T KOG0643|consen 7 QGHERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSLNGERLGTYDGH------TGAVWCCDIDWDSKHLITGSADQTAKLW 79 (327)
T ss_pred ccCccccceEEecC-CCcEEEEecCCCCceEEEecCCceeeeecCC------CceEEEEEecCCcceeeeccccceeEEE
Confidence 45899999999998 8999999999999999998889999999999 7899999999999999999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
|+++|+.+.++. ....|..+.|+++|++++...
T Consensus 80 Dv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~t 112 (327)
T KOG0643|consen 80 DVETGKQLATWK-TNSPVKRVDFSFGGNLILAST 112 (327)
T ss_pred EcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEe
Confidence 999999999887 456799999999999876554
No 58
>KOG0265|consensus
Probab=99.79 E-value=7.6e-18 Score=96.68 Aligned_cols=114 Identities=18% Similarity=0.231 Sum_probs=89.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------- 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------- 50 (116)
.|.+.|..+.|.+ +++.+++++.|.+++.||.++|+..+.+++|...+
T Consensus 88 gHsgAVM~l~~~~-d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~ 166 (338)
T KOG0265|consen 88 GHSGAVMELHGMR-DGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE 166 (338)
T ss_pred cccceeEeeeecc-CCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc
Confidence 4889999999999 88999999999999999999999998888884421
Q ss_pred -----CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 -----SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 -----~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
....+++++.|..++..+.+++-|+.|++||++....+..+.+|...|+.+..+|+|.++.+-+.|
T Consensus 167 ~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd 237 (338)
T KOG0265|consen 167 AIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMD 237 (338)
T ss_pred hhhccccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCcccccccc
Confidence 112345556666666666666666666666666667788888999999999999999998877654
No 59
>KOG0296|consensus
Probab=99.78 E-value=3e-17 Score=96.28 Aligned_cols=108 Identities=12% Similarity=0.159 Sum_probs=99.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...+++++.+| +.+++++|+.|..-++|++.++....++.+| ...|+++.|+.+|.+++++..+|.|++|.
T Consensus 62 ~H~~svFavsl~P-~~~l~aTGGgDD~AflW~~~~ge~~~eltgH------KDSVt~~~FshdgtlLATGdmsG~v~v~~ 134 (399)
T KOG0296|consen 62 KHTDSVFAVSLHP-NNNLVATGGGDDLAFLWDISTGEFAGELTGH------KDSVTCCSFSHDGTLLATGDMSGKVLVFK 134 (399)
T ss_pred hcCCceEEEEeCC-CCceEEecCCCceEEEEEccCCcceeEecCC------CCceEEEEEccCceEEEecCCCccEEEEE
Confidence 4889999999999 8899999999999999999999999999999 66899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
..++.....+......+.-+.|+|.+.+|+.|+.|
T Consensus 135 ~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~D 169 (399)
T KOG0296|consen 135 VSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTD 169 (399)
T ss_pred cccCceEEEeecccCceEEEEecccccEEEeecCC
Confidence 99999888887566678889999999999998876
No 60
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.78 E-value=5.4e-17 Score=106.59 Aligned_cols=106 Identities=8% Similarity=0.149 Sum_probs=92.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEEC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~~ 82 (116)
...+.++.|++..+.++++++.|+.|++||+.+++.+..+.+| ...|.+++|+| ++.++++++.|+.|++||+
T Consensus 532 ~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H------~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~ 605 (793)
T PLN00181 532 RSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEH------EKRVWSIDYSSADPTLLASGSDDGSVKLWSI 605 (793)
T ss_pred cCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC------CCCEEEEEEcCCCCCEEEEEcCCCEEEEEEC
Confidence 4567889998856789999999999999999988888888888 67899999997 6889999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEEC-CCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVD-PQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~s~d 116 (116)
.++..+..+..+ ..+.++.|+ +++.+|++|+.|
T Consensus 606 ~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~d 639 (793)
T PLN00181 606 NQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSAD 639 (793)
T ss_pred CCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCC
Confidence 999888877644 568899995 579999999865
No 61
>KOG0275|consensus
Probab=99.77 E-value=2.2e-19 Score=104.62 Aligned_cols=112 Identities=14% Similarity=0.181 Sum_probs=94.8
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC--cCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ--FGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
-+.+.|..|+| +++++++++.||-+.+|+..+|+..+.++... ...-+...+.+++|+.|..-+++|+.||.|++|.
T Consensus 213 KSh~EcA~FSP-DgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWr 291 (508)
T KOG0275|consen 213 KSHVECARFSP-DGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWR 291 (508)
T ss_pred ccchhheeeCC-CCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEE
Confidence 35678899999 89999999999999999999887665544221 1111245789999999999999999999999999
Q ss_pred CCCCeEEEEee-cccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMV-AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++|.+++.+. .|...|.++.|+.|+..+++++.|
T Consensus 292 i~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD 327 (508)
T KOG0275|consen 292 IETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFD 327 (508)
T ss_pred EecchHHHHhhhhhccCeeEEEEccCcchhhccccc
Confidence 99999998886 789999999999999999998876
No 62
>KOG0292|consensus
Probab=99.77 E-value=2.1e-18 Score=110.65 Aligned_cols=106 Identities=23% Similarity=0.408 Sum_probs=100.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+.++..++|+| ...+++++--+|.|++||..-+..+..|..| .++|..++|+|+++++++|++|-.|++|+.+
T Consensus 9 SsRvKglsFHP-~rPwILtslHsG~IQlWDYRM~tli~rFdeH------dGpVRgv~FH~~qplFVSGGDDykIkVWnYk 81 (1202)
T KOG0292|consen 9 SSRVKGLSFHP-KRPWILTSLHSGVIQLWDYRMGTLIDRFDEH------DGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK 81 (1202)
T ss_pred cccccceecCC-CCCEEEEeecCceeeeehhhhhhHHhhhhcc------CCccceeeecCCCCeEEecCCccEEEEEecc
Confidence 56789999999 7899999999999999999989999999999 7899999999999999999999999999999
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+++.++.+|-.-|+.+.|++...|++++|.|
T Consensus 82 ~rrclftL~GHlDYVRt~~FHheyPWIlSASDD 114 (1202)
T KOG0292|consen 82 TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDD 114 (1202)
T ss_pred cceehhhhccccceeEEeeccCCCceEEEccCC
Confidence 999999999999999999999999999999987
No 63
>KOG0264|consensus
Probab=99.77 E-value=9.2e-18 Score=100.21 Aligned_cols=108 Identities=16% Similarity=0.218 Sum_probs=90.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--CceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--GKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~ 79 (116)
|...|..++|++.+.+.+++.++|+.+.|||.++ .+.....+.| .+.+++++|+|- +.+||+++.|++|.+
T Consensus 226 h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah------~~~vn~~~fnp~~~~ilAT~S~D~tV~L 299 (422)
T KOG0264|consen 226 HEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAH------SAEVNCVAFNPFNEFILATGSADKTVAL 299 (422)
T ss_pred CCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccccc------CCceeEEEeCCCCCceEEeccCCCcEEE
Confidence 6788999999998778889999999999999994 4555566666 789999999996 568899999999999
Q ss_pred EECCCC-eEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 80 FDNVSG-KLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
||+++- +.+..+.+|...|..+.|+|... .|++.+.|
T Consensus 300 wDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D 338 (422)
T KOG0264|consen 300 WDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD 338 (422)
T ss_pred eechhcccCceeccCCCcceEEEEeCCCCCceeEecccC
Confidence 999864 45788889999999999999654 66666654
No 64
>KOG1539|consensus
Probab=99.77 E-value=7.4e-17 Score=102.70 Aligned_cols=113 Identities=19% Similarity=0.217 Sum_probs=93.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------- 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------- 50 (116)
.|.++|++++... -++.+++++.+|.+.+||......+..+....+..
T Consensus 491 ah~~~V~gla~D~-~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvv 569 (910)
T KOG1539|consen 491 AHKGEVTGLAVDG-TNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVV 569 (910)
T ss_pred cccCceeEEEecC-CCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhh
Confidence 3678899999987 56788999999999999998665444443222110
Q ss_pred ----CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 ----SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 ----~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|.+.+++++|+|||+++++++.|++|++||+.++.++-.+. -..+..++.|+|+|.+|||+..|
T Consensus 570 R~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd 638 (910)
T KOG1539|consen 570 REFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVD 638 (910)
T ss_pred HHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEec
Confidence 789999999999999999999999999999999999988776 45678899999999999997654
No 65
>KOG1445|consensus
Probab=99.77 E-value=1.5e-18 Score=108.40 Aligned_cols=108 Identities=21% Similarity=0.295 Sum_probs=95.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDD 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d 74 (116)
....|+++.|.|-+.+.|+++++++.|.+|.+..+ .+...+..| ...|.++.|+|- ...+++++.|
T Consensus 626 Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h------~eKI~slRfHPLAadvLa~asyd 699 (1012)
T KOG1445|consen 626 NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIH------GEKITSLRFHPLAADVLAVASYD 699 (1012)
T ss_pred cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecc------cceEEEEEecchhhhHhhhhhcc
Confidence 44568999999999999999999999999998743 344566666 668999999995 5688999999
Q ss_pred CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+|++||+.+++....+.+|.+.|.+++|+|+|+.+++.+.|
T Consensus 700 ~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKD 741 (1012)
T KOG1445|consen 700 STIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKD 741 (1012)
T ss_pred ceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecC
Confidence 999999999999998999999999999999999999999876
No 66
>KOG0264|consensus
Probab=99.76 E-value=3.6e-17 Score=97.71 Aligned_cols=109 Identities=16% Similarity=0.211 Sum_probs=90.6
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~ 79 (116)
.|.+.+.+++|+|.++..|++++.|++|.+||++.. +++..+.+| ...|..+.|+|. ...+++++.|+.+.+
T Consensus 270 ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H------~dev~~V~WSPh~etvLASSg~D~rl~v 343 (422)
T KOG0264|consen 270 AHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGH------EDEVFQVEWSPHNETVLASSGTDRRLNV 343 (422)
T ss_pred ccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCC------CcceEEEEeCCCCCceeEecccCCcEEE
Confidence 478999999999988889999999999999999864 468888998 678999999998 568899999999999
Q ss_pred EECCCC--------------eEEEEeecccccEEEEEECCCCcEEE-eeecC
Q psy17133 80 FDNVSG--------------KLVHSMVAHLDAVTSLAVDPQGLYIL-SGTYQ 116 (116)
Q Consensus 80 ~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~~l~-~~s~d 116 (116)
||+..- +++..-.+|...|..+.|+|...+++ +.+.|
T Consensus 344 WDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeD 395 (422)
T KOG0264|consen 344 WDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAED 395 (422)
T ss_pred EeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCC
Confidence 998531 23444558889999999999887654 55544
No 67
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.76 E-value=1.6e-16 Score=104.37 Aligned_cols=107 Identities=16% Similarity=0.209 Sum_probs=91.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc-CCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH-PTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~d~~i~~~ 80 (116)
.|.+.|.+++|+|.++.+|++++.|+.|++||+.++..+..+..+ ..+.++.|+ +++..+++++.|+.|++|
T Consensus 573 ~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-------~~v~~v~~~~~~g~~latgs~dg~I~iw 645 (793)
T PLN00181 573 EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-------ANICCVQFPSESGRSLAFGSADHKVYYY 645 (793)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-------CCeEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 377889999999757789999999999999999988888777654 468889995 568999999999999999
Q ss_pred ECCCCe-EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGK-LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+++.+ .+..+.+|...|..+.|. ++.+|++++.|
T Consensus 646 D~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D 681 (793)
T PLN00181 646 DLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTD 681 (793)
T ss_pred ECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECC
Confidence 998765 456677888899999997 67889998876
No 68
>KOG0294|consensus
Probab=99.76 E-value=5.2e-17 Score=93.91 Aligned_cols=106 Identities=15% Similarity=0.293 Sum_probs=90.2
Q ss_pred CCCCCceEEEEccCCCc--EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDEST--KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~--~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
-|.+.|+++.|.+ ... .|++|++||.|.+|+......+..+++| .+.|+.++++|.+++..+.+.|+.++.
T Consensus 81 ~HagsitaL~F~~-~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H------~~~Vt~lsiHPS~KLALsVg~D~~lr~ 153 (362)
T KOG0294|consen 81 SHAGSITALKFYP-PLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAH------KGQVTDLSIHPSGKLALSVGGDQVLRT 153 (362)
T ss_pred ccccceEEEEecC-CcchhheeeecCCCcEEEEEcCCeEEeeeeccc------ccccceeEecCCCceEEEEcCCceeee
Confidence 3789999999998 443 8999999999999999999999999999 678999999999999999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
|++-.|+.-..+.- ......+.|+|.|.+++.++.
T Consensus 154 WNLV~Gr~a~v~~L-~~~at~v~w~~~Gd~F~v~~~ 188 (362)
T KOG0294|consen 154 WNLVRGRVAFVLNL-KNKATLVSWSPQGDHFVVSGR 188 (362)
T ss_pred ehhhcCccceeecc-CCcceeeEEcCCCCEEEEEec
Confidence 99998887665542 223345899999998876654
No 69
>KOG0291|consensus
Probab=99.76 E-value=5.7e-17 Score=102.48 Aligned_cols=105 Identities=14% Similarity=0.255 Sum_probs=95.8
Q ss_pred CCceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
.+|..+.|+. .|++|+.++ .-|++-+|+..+...+....+| ...+++++++|||+++++|++|+.|++||..
T Consensus 308 ~~I~t~~~N~-tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH------~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~ 380 (893)
T KOG0291|consen 308 QKILTVSFNS-TGDWIAFGCSKLGQLLVWEWQSESYVLKQQGH------SDRITSLAYSPDGQLIATGAEDGKVKVWNTQ 380 (893)
T ss_pred ceeeEEEecc-cCCEEEEcCCccceEEEEEeeccceeeecccc------ccceeeEEECCCCcEEEeccCCCcEEEEecc
Confidence 4678899987 789998876 4589999999988888888888 5689999999999999999999999999999
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+-+..++..|...|+.+.|+..++.+++.|.|
T Consensus 381 SgfC~vTFteHts~Vt~v~f~~~g~~llssSLD 413 (893)
T KOG0291|consen 381 SGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLD 413 (893)
T ss_pred CceEEEEeccCCCceEEEEEEecCCEEEEeecC
Confidence 999999999999999999999999999999876
No 70
>KOG0281|consensus
Probab=99.76 E-value=5.7e-18 Score=99.37 Aligned_cols=109 Identities=17% Similarity=0.294 Sum_probs=88.6
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------------------------
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------ 50 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------ 50 (116)
+.|+|.|.|+.|.. ..+++|+.|.+|++||+++++++..+-+|-..+
T Consensus 234 ~GHtGSVLCLqyd~---rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~i 310 (499)
T KOG0281|consen 234 TGHTGSVLCLQYDE---RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDI 310 (499)
T ss_pred hcCCCcEEeeeccc---eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHH
Confidence 46899999999864 699999999999999999998887766654432
Q ss_pred -------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 -------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 -------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|...|+.+.|+ .+++++++.|.+|++|++.+++.++++.+|...|-++.+ .++++++||.|
T Consensus 311 t~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSD 379 (499)
T KOG0281|consen 311 TLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 379 (499)
T ss_pred HHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCC
Confidence 666667777664 569999999999999999999999999988877766544 67788888865
No 71
>KOG0277|consensus
Probab=99.75 E-value=6.5e-17 Score=91.29 Aligned_cols=108 Identities=17% Similarity=0.152 Sum_probs=93.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~ 81 (116)
|...|.++.|++.++..+++++-|++|++|+..-++.+.+|.+| ...|....|+|. +.++++++.|+.+++||
T Consensus 103 H~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh------~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwd 176 (311)
T KOG0277|consen 103 HKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGH------NSCIYQAAFSPHIPNLFASASGDGTLRLWD 176 (311)
T ss_pred hhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCC------ccEEEEEecCCCCCCeEEEccCCceEEEEE
Confidence 56789999999977788888999999999999988899999999 678999999996 67999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
++..-....+..|...+.++.|+. +.+.++|++.|
T Consensus 177 vr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd 212 (311)
T KOG0277|consen 177 VRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVD 212 (311)
T ss_pred ecCCCceeEEEeccceeEeecccccCCcEEEecCCC
Confidence 975444344777888999999987 67788888765
No 72
>KOG1407|consensus
Probab=99.75 E-value=5e-17 Score=91.99 Aligned_cols=106 Identities=12% Similarity=0.085 Sum_probs=95.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|+....|+.|+| +|+++++|+.|-.+.+||++..-.++.+.-. .-+|..+.|+.+|+.||++++|..|-|=++
T Consensus 188 H~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC~R~isRl------dwpVRTlSFS~dg~~lASaSEDh~IDIA~v 260 (313)
T KOG1407|consen 188 HPSNCICIEFDP-DGRYFATGSADALVSLWDVDELICERCISRL------DWPVRTLSFSHDGRMLASASEDHFIDIAEV 260 (313)
T ss_pred CCcceEEEEECC-CCceEeeccccceeeccChhHhhhheeeccc------cCceEEEEeccCcceeeccCccceEEeEec
Confidence 677788999999 8999999999999999999877777777766 568999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++|..+..+. +.++...++|+|....||-++.|
T Consensus 261 etGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 261 ETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred ccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence 9999998887 67788999999999999877664
No 73
>KOG0296|consensus
Probab=99.75 E-value=1.6e-16 Score=93.32 Aligned_cols=108 Identities=20% Similarity=0.258 Sum_probs=97.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|-..|+++.|+. ++.+|++|..+|.|++|...++.....+... -..+.=+.|+|.+.+++.|+.||.+.+|.
T Consensus 104 gHKDSVt~~~Fsh-dgtlLATGdmsG~v~v~~~stg~~~~~~~~e------~~dieWl~WHp~a~illAG~~DGsvWmw~ 176 (399)
T KOG0296|consen 104 GHKDSVTCCSFSH-DGTLLATGDMSGKVLVFKVSTGGEQWKLDQE------VEDIEWLKWHPRAHILLAGSTDGSVWMWQ 176 (399)
T ss_pred CCCCceEEEEEcc-CceEEEecCCCccEEEEEcccCceEEEeecc------cCceEEEEecccccEEEeecCCCcEEEEE
Confidence 3677899999999 8999999999999999999999887777643 35688899999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+....+.+.+|..++++-.|.|+|+.++++..|
T Consensus 177 ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~d 211 (399)
T KOG0296|consen 177 IPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDD 211 (399)
T ss_pred CCCcceeeEecCCCCCcccccccCCCceEEEEecC
Confidence 99888888999999999999999999999988654
No 74
>KOG2394|consensus
Probab=99.75 E-value=1.2e-17 Score=102.22 Aligned_cols=95 Identities=20% Similarity=0.277 Sum_probs=87.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
.+.|..++|+| ++++|++.+.|+.++|+|..+.+.+..++.. -+...+++|+|||++|++|++|-.|.+|.+.
T Consensus 290 ~g~in~f~FS~-DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSY------FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~ 362 (636)
T KOG2394|consen 290 EGSINEFAFSP-DGKYLATVSQDGFLRIFDFDTQELLGVMKSY------FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE 362 (636)
T ss_pred cccccceeEcC-CCceEEEEecCceEEEeeccHHHHHHHHHhh------ccceEEEEEcCCccEEEecCCcceEEEEEec
Confidence 46789999999 8999999999999999999988887777766 4679999999999999999999999999999
Q ss_pred CCeEEEEeecccccEEEEEECC
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDP 105 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~ 105 (116)
.++.+..-.+|..+|+.++|+|
T Consensus 363 erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 363 ERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred cceEEEeccccccceeeEeecc
Confidence 9999998999999999999986
No 75
>KOG0294|consensus
Probab=99.75 E-value=9.1e-17 Score=92.93 Aligned_cols=105 Identities=24% Similarity=0.314 Sum_probs=95.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~~ 80 (116)
|.+.+++++.+. .++++|+.|.+|+|||+....++..+..| .+.|+++.|.+.-. .++++++||.|.+|
T Consensus 42 H~~sitavAVs~---~~~aSGssDetI~IYDm~k~~qlg~ll~H------agsitaL~F~~~~S~shLlS~sdDG~i~iw 112 (362)
T KOG0294|consen 42 HAGSITALAVSG---PYVASGSSDETIHIYDMRKRKQLGILLSH------AGSITALKFYPPLSKSHLLSGSDDGHIIIW 112 (362)
T ss_pred cccceeEEEecc---eeEeccCCCCcEEEEeccchhhhcceecc------ccceEEEEecCCcchhheeeecCCCcEEEE
Confidence 788999999854 89999999999999999988888888888 78899999998754 99999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+...=+.+..+++|.+.|+.++.+|.++.-++.+.|
T Consensus 113 ~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D 148 (362)
T KOG0294|consen 113 RVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGD 148 (362)
T ss_pred EcCCeEEeeeecccccccceeEecCCCceEEEEcCC
Confidence 999889999999999999999999999988877765
No 76
>KOG0641|consensus
Probab=99.75 E-value=2.5e-16 Score=88.09 Aligned_cols=112 Identities=15% Similarity=0.282 Sum_probs=93.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC-cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|++.|.++. + .++-++++|++|..|++||+.-...+..+...... ....+.+..+++.|.|++++++..|....+||
T Consensus 182 htghilaly-s-wn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lyd 259 (350)
T KOG0641|consen 182 HTGHILALY-S-WNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYD 259 (350)
T ss_pred CcccEEEEE-E-ecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEE
Confidence 667777663 2 26689999999999999999877777766433211 11235689999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++.++.++.+..|...|+++.|+|..-++++++.|
T Consensus 260 irg~r~iq~f~phsadir~vrfsp~a~yllt~syd 294 (350)
T KOG0641|consen 260 IRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYD 294 (350)
T ss_pred eeCCceeeeeCCCccceeEEEeCCCceEEEEeccc
Confidence 99999999999999999999999999999999876
No 77
>KOG1273|consensus
Probab=99.74 E-value=6.2e-17 Score=93.88 Aligned_cols=95 Identities=15% Similarity=0.172 Sum_probs=85.0
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 85 (116)
...++.|++ .|.++++|..+|.+.|||+.+...-+.+.+| -.+|.+++|+++|+.+++++.|..+.+||+..|
T Consensus 25 ~a~~~~Fs~-~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH------~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~g 97 (405)
T KOG1273|consen 25 LAECCQFSR-WGDYLAVGCANGRVVIYDFDTFRIARMLSAH------VRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKG 97 (405)
T ss_pred ccceEEecc-CcceeeeeccCCcEEEEEccccchhhhhhcc------ccceeEEEecCCCCEeeeecCCceeEEEeccCC
Confidence 368899999 8999999999999999999998877777788 678999999999999999999999999999999
Q ss_pred eEEEEeecccccEEEEEECCCCc
Q psy17133 86 KLVHSMVAHLDAVTSLAVDPQGL 108 (116)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~~~~ 108 (116)
.+++.+. ...+|....|+|..+
T Consensus 98 s~l~rir-f~spv~~~q~hp~k~ 119 (405)
T KOG1273|consen 98 SPLKRIR-FDSPVWGAQWHPRKR 119 (405)
T ss_pred CceeEEE-ccCccceeeeccccC
Confidence 9888876 567899999988544
No 78
>KOG0305|consensus
Probab=99.74 E-value=1.6e-16 Score=97.74 Aligned_cols=108 Identities=17% Similarity=0.262 Sum_probs=95.5
Q ss_pred CCCCCceEEEEccCCCcEEEEee--CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE--EeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAF--DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT--AHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~d~~i 77 (116)
.|.+.|.+++|+|.....|++|+ .|+.|++||..++..+..+... +.|..+.|++..+.+++ |..++.|
T Consensus 341 ~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg-------sQVcsL~Wsk~~kEi~sthG~s~n~i 413 (484)
T KOG0305|consen 341 EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG-------SQVCSLIWSKKYKELLSTHGYSENQI 413 (484)
T ss_pred ccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccC-------CceeeEEEcCCCCEEEEecCCCCCcE
Confidence 47889999999998888999875 6999999999999988887665 58999999999766655 4457899
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.||+..+.+.+..+.+|..+|..++++|||..+++|+.|
T Consensus 414 ~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~D 452 (484)
T KOG0305|consen 414 TLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAAD 452 (484)
T ss_pred EEEeccccceeeeecCCcceeEEEEECCCCCEEEEeccc
Confidence 999999999999999999999999999999999999876
No 79
>KOG0772|consensus
Probab=99.74 E-value=1.3e-17 Score=101.76 Aligned_cols=114 Identities=17% Similarity=0.159 Sum_probs=86.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.|...+++-+|+|.+.+.+++++.|+++++|++..- +++..++.... .+..-.++..+|+++++++|+++.||.|.+|
T Consensus 266 GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~-~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W 344 (641)
T KOG0772|consen 266 GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPA-GGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW 344 (641)
T ss_pred CceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccC-CCcccCceeeecCCCcchhhhcccCCceeee
Confidence 367778999999988899999999999999999753 34444443211 1113457888999999999999999999999
Q ss_pred ECCCCeE---EEEeecccc--cEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKL---VHSMVAHLD--AVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~---~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d 116 (116)
+...... ...-..|.. .|++++|+++|++|++-+.|
T Consensus 345 ~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D 385 (641)
T KOG0772|consen 345 DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFD 385 (641)
T ss_pred ecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCC
Confidence 9753221 222235655 89999999999999987665
No 80
>KOG0305|consensus
Probab=99.74 E-value=5.6e-17 Score=99.73 Aligned_cols=111 Identities=15% Similarity=0.200 Sum_probs=95.5
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEec-CCcCc--------------------------------
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS-SQFGV-------------------------------- 50 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~~-------------------------------- 50 (116)
...|+++.|++ +|..|++|..+|.|.|||....+.+..+.+ |..-.
T Consensus 217 ~~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~ 295 (484)
T KOG0305|consen 217 EELVTSVKWSP-DGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVS 295 (484)
T ss_pred CCceEEEEECC-CCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhh
Confidence 57799999999 899999999999999999887766666665 33211
Q ss_pred ---CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEeeec
Q psy17133 51 ---SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTY 115 (116)
Q Consensus 51 ---~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~ 115 (116)
.|...|..+.|++|+..+++++.|+.+.|||....+.+..+..|.+.|..++|+| ....||+|+.
T Consensus 296 ~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGG 364 (484)
T KOG0305|consen 296 TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGG 364 (484)
T ss_pred hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCC
Confidence 5778899999999999999999999999999987888888889999999999999 5678888763
No 81
>KOG0973|consensus
Probab=99.74 E-value=4.9e-17 Score=105.30 Aligned_cols=105 Identities=11% Similarity=0.156 Sum_probs=91.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.++.|+| ++.++++++.|.+|.+|+..+.+.+..+++| .+.|-.+.|+|-|+++++.++|+++++|+
T Consensus 127 ~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H------~s~VKGvs~DP~Gky~ASqsdDrtikvwr 199 (942)
T KOG0973|consen 127 GHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLRGH------QSLVKGVSWDPIGKYFASQSDDRTLKVWR 199 (942)
T ss_pred cCCCccceeccCC-CccEEEEecccceEEEEccccceeeeeeecc------cccccceEECCccCeeeeecCCceEEEEE
Confidence 3788999999999 8899999999999999999999999999999 78999999999999999999999999999
Q ss_pred CCCCeEEEEeec------ccccEEEEEECCCCcEEEee
Q psy17133 82 NVSGKLVHSMVA------HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 82 ~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~ 113 (116)
+.+-...+.+.. -....+.+.|+|||.+|++.
T Consensus 200 t~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~ 237 (942)
T KOG0973|consen 200 TSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASP 237 (942)
T ss_pred cccceeeEeeccchhhCCCcceeeecccCCCcCeecch
Confidence 765444444432 23467899999999999874
No 82
>KOG0267|consensus
Probab=99.74 E-value=3.6e-18 Score=107.25 Aligned_cols=108 Identities=19% Similarity=0.245 Sum_probs=99.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|++.|.++.|++ ....|++|+.+|.|++||++..+.++.+.+| ...+.++.|+|-+.+.++++.|..+++||
T Consensus 68 ~hespIeSl~f~~-~E~LlaagsasgtiK~wDleeAk~vrtLtgh------~~~~~sv~f~P~~~~~a~gStdtd~~iwD 140 (825)
T KOG0267|consen 68 GHESPIESLTFDT-SERLLAAGSASGTIKVWDLEEAKIVRTLTGH------LLNITSVDFHPYGEFFASGSTDTDLKIWD 140 (825)
T ss_pred ccCCcceeeecCc-chhhhcccccCCceeeeehhhhhhhhhhhcc------ccCcceeeeccceEEeccccccccceehh
Confidence 4889999999999 6678888999999999999999999999999 66899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++..-+.+.+.+|...+..+.|+|+|++++.++.|
T Consensus 141 ~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed 175 (825)
T KOG0267|consen 141 IRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGED 175 (825)
T ss_pred hhccCceeeecCCcceeEEEeecCCCceeeccCCc
Confidence 99888888898898899999999999999998874
No 83
>KOG0277|consensus
Probab=99.74 E-value=7.8e-17 Score=91.00 Aligned_cols=106 Identities=16% Similarity=0.235 Sum_probs=91.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEEC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~ 82 (116)
..+..++|++...+.+++++.||.+++||.. ..+++..++.| ...|.++.|++. +..+++++.|++|++|+.
T Consensus 61 D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH------~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~ 134 (311)
T KOG0277|consen 61 DGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEH------KREVYSVDWNTVRRRIFLTSSWDGTIKLWDP 134 (311)
T ss_pred cceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhh------hhheEEeccccccceeEEeeccCCceEeecC
Confidence 4578899999778899999999999999964 34578888888 678999999986 567788899999999999
Q ss_pred CCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
.-...+.++.+|...|...+|+| ..+.++++|.|
T Consensus 135 ~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd 169 (311)
T KOG0277|consen 135 NRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGD 169 (311)
T ss_pred CCCcceEeecCCccEEEEEecCCCCCCeEEEccCC
Confidence 98999999999999999999999 56788888765
No 84
>KOG0315|consensus
Probab=99.74 E-value=1.7e-16 Score=89.48 Aligned_cols=95 Identities=16% Similarity=0.164 Sum_probs=84.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|++.+..+.++| ++++|++++.|.+++||+.++. +....++++ +.-+...+|+.|+.+|++++.|+.+++|+
T Consensus 214 h~~~il~C~lSP-d~k~lat~ssdktv~iwn~~~~~kle~~l~gh------~rWvWdc~FS~dg~YlvTassd~~~rlW~ 286 (311)
T KOG0315|consen 214 HNGHILRCLLSP-DVKYLATCSSDKTVKIWNTDDFFKLELVLTGH------QRWVWDCAFSADGEYLVTASSDHTARLWD 286 (311)
T ss_pred ccceEEEEEECC-CCcEEEeecCCceEEEEecCCceeeEEEeecC------CceEEeeeeccCccEEEecCCCCceeecc
Confidence 788999999999 8899999999999999999877 455566777 66799999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEEC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVD 104 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~ 104 (116)
+..++.++++.+|.....+++.+
T Consensus 287 ~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 287 LSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred cccCceeeecCCcccccEEEEee
Confidence 99999999999888777776653
No 85
>KOG0310|consensus
Probab=99.72 E-value=6.4e-16 Score=93.41 Aligned_cols=106 Identities=20% Similarity=0.196 Sum_probs=91.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~ 81 (116)
|+.++....|+|.++..+++|++|+.+++||+.+......+.+| +..|.+.+++|. +..+++|+-||.|++||
T Consensus 109 h~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~h------tDYVR~g~~~~~~~hivvtGsYDg~vrl~D 182 (487)
T KOG0310|consen 109 HQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGH------TDYVRCGDISPANDHIVVTGSYDGKVRLWD 182 (487)
T ss_pred ccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCC------cceeEeeccccCCCeEEEecCCCceEEEEE
Confidence 67889999999988888899999999999999987766677888 678999999997 45889999999999999
Q ss_pred CCCC-eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 82 NVSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 82 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
++.. ..+..+. |..+|.++.+-|.|..+++++.
T Consensus 183 tR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgG 216 (487)
T KOG0310|consen 183 TRSLTSRVVELN-HGCPVESVLALPSGSLIASAGG 216 (487)
T ss_pred eccCCceeEEec-CCCceeeEEEcCCCCEEEEcCC
Confidence 9876 4455554 8889999999999999998874
No 86
>KOG0308|consensus
Probab=99.72 E-value=4.5e-16 Score=97.08 Aligned_cols=107 Identities=17% Similarity=0.223 Sum_probs=98.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
+-..|++++.++ .+..+++|+..+.+++||..+++.+..+.+| ...|..+..++||..+++++.|++|++||+
T Consensus 170 ~k~siYSLA~N~-t~t~ivsGgtek~lr~wDprt~~kimkLrGH------TdNVr~ll~~dDGt~~ls~sSDgtIrlWdL 242 (735)
T KOG0308|consen 170 PKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWDPRTCKKIMKLRGH------TDNVRVLLVNDDGTRLLSASSDGTIRLWDL 242 (735)
T ss_pred CccceeeeecCC-cceEEEecCcccceEEeccccccceeeeecc------ccceEEEEEcCCCCeEeecCCCceEEeeec
Confidence 345789999998 7789999999999999999999999999999 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
...+++.++..|...|+++..+|+-..+++|+.|
T Consensus 243 gqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd 276 (735)
T KOG0308|consen 243 GQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRD 276 (735)
T ss_pred cccceeeeEEeccCceEEEeeCCCcceEEecCCC
Confidence 9999999999999999999999999999998875
No 87
>KOG2394|consensus
Probab=99.72 E-value=9e-17 Score=98.45 Aligned_cols=112 Identities=23% Similarity=0.365 Sum_probs=86.0
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCC--------------Cce--eEEEecCCc--C----cCCCCceeEEEEc
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLET--------------GKP--VVRIDSSQF--G----VSGGGGINRVVCH 62 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--------------~~~--~~~~~~~~~--~----~~~~~~i~~~~~~ 62 (116)
..++++.|.|.+...++++..++.+++||..- +.. +.+.+.+.. . .--.+.|+.++|+
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS 299 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFS 299 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEc
Confidence 57899999996677888888999999997541 000 111111111 0 0013468889999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 63 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|||++||+.+.|+.++|||..+.+++..++..-+...+++|+|||++|++|+.|
T Consensus 300 ~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGED 353 (636)
T KOG2394|consen 300 PDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGED 353 (636)
T ss_pred CCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCc
Confidence 999999999999999999999888887777666789999999999999999987
No 88
>KOG0293|consensus
Probab=99.71 E-value=1.1e-16 Score=95.57 Aligned_cols=109 Identities=18% Similarity=0.241 Sum_probs=92.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~ 81 (116)
...+|+++..+. +++++++.-.+..+++||++..+.+..+.+|.. ...+..-||.- +..++++|++|+.|+||+
T Consensus 394 e~~~its~~iS~-d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq----~~fiIrSCFgg~~~~fiaSGSED~kvyIWh 468 (519)
T KOG0293|consen 394 EEQPITSFSISK-DGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ----GHFIIRSCFGGGNDKFIASGSEDSKVYIWH 468 (519)
T ss_pred ccCceeEEEEcC-CCcEEEEEcccCeeEEeecchhhHHHHhhcccc----cceEEEeccCCCCcceEEecCCCceEEEEE
Confidence 356788999998 788999988999999999998888888888853 33455556653 568999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCC-CcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQ-GLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~s~d 116 (116)
-.+++++..+.+|...|.+++|+|. ..++|++|.|
T Consensus 469 r~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDD 504 (519)
T KOG0293|consen 469 RISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDD 504 (519)
T ss_pred ccCCceeEeecCCcceeeEEecCCCCHHHhhccCCC
Confidence 9999999999999999999999995 5578888876
No 89
>KOG0306|consensus
Probab=99.71 E-value=1.4e-16 Score=100.68 Aligned_cols=107 Identities=20% Similarity=0.253 Sum_probs=100.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|-=+|.++..+| +++.+++|+.|..|++|-+.-|..-+.+-+| ...|.++.|-|+...+.+++.|+.++-||-
T Consensus 549 HkLPV~smDIS~-DSklivTgSADKnVKiWGLdFGDCHKS~fAH------dDSvm~V~F~P~~~~FFt~gKD~kvKqWDg 621 (888)
T KOG0306|consen 549 HKLPVLSMDISP-DSKLIVTGSADKNVKIWGLDFGDCHKSFFAH------DDSVMSVQFLPKTHLFFTCGKDGKVKQWDG 621 (888)
T ss_pred cccceeEEeccC-CcCeEEeccCCCceEEeccccchhhhhhhcc------cCceeEEEEcccceeEEEecCcceEEeech
Confidence 566899999999 8899999999999999999989888888888 568999999999899999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.-+.++.+.+|...|++++.+|+|.+++++|+|
T Consensus 622 ~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD 655 (888)
T KOG0306|consen 622 EKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHD 655 (888)
T ss_pred hhhhhheeeccchheeeeeEEcCCCCeEEeccCC
Confidence 9999999999999999999999999999999986
No 90
>KOG0288|consensus
Probab=99.71 E-value=6.7e-16 Score=91.99 Aligned_cols=112 Identities=22% Similarity=0.302 Sum_probs=92.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
+-.+.|+++..++ ++..+++++.|..+.+.|+.+.+....+...... -.+..+.+.|+|++.++++|+.||.|+||+
T Consensus 339 ~~gg~vtSl~ls~-~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k--~asDwtrvvfSpd~~YvaAGS~dgsv~iW~ 415 (459)
T KOG0288|consen 339 PLGGRVTSLDLSM-DGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFK--CASDWTRVVFSPDGSYVAAGSADGSVYIWS 415 (459)
T ss_pred ecCcceeeEeecc-CCeEEeeecCCCceeeeecccccEEEEeeccccc--cccccceeEECCCCceeeeccCCCcEEEEE
Confidence 3467899999999 8888999999999999999988777666533110 024578899999999999999999999999
Q ss_pred CCCCeEEEEeecccc--cEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLD--AVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d 116 (116)
+.++++...+..... .|++++|+|.|..|++++.+
T Consensus 416 v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~ 452 (459)
T KOG0288|consen 416 VFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQ 452 (459)
T ss_pred ccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCC
Confidence 999999888764433 59999999999999887653
No 91
>KOG0316|consensus
Probab=99.71 E-value=4.5e-16 Score=87.30 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=86.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.-.|..++.+. +...+++++.|..+.+||+++|+.++.|.+| .+.|+.+.|+.+...+++++.|..+++||.
T Consensus 58 hG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH------~aqVNtV~fNeesSVv~SgsfD~s~r~wDC 130 (307)
T KOG0316|consen 58 HGHEVLDAALSS-DNSKFASCGGDKAVQVWDVNTGKVDRRFRGH------LAQVNTVRFNEESSVVASGSFDSSVRLWDC 130 (307)
T ss_pred CCceeeeccccc-cccccccCCCCceEEEEEcccCeeeeecccc------cceeeEEEecCcceEEEeccccceeEEEEc
Confidence 445677888877 6688999999999999999999999999999 779999999999999999999999999998
Q ss_pred CCCe--EE-----------------------------EEe--e-------cccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGK--LV-----------------------------HSM--V-------AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~--~~-----------------------------~~~--~-------~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++.. ++ +.+ + -...+|++++|+++++..+.++.|
T Consensus 131 RS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~ 204 (307)
T KOG0316|consen 131 RSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLD 204 (307)
T ss_pred ccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeecc
Confidence 7521 01 111 0 123579999999999988877754
No 92
>KOG1009|consensus
Probab=99.71 E-value=1.1e-16 Score=95.03 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=92.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC--------C-----C---ceeEEEecCCcCcCCCCceeEEEEcCCCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE--------T-----G---KPVVRIDSSQFGVSGGGGINRVVCHPTLP 66 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--------~-----~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (116)
|...|+.+.|+| +++.+++|++++.+.+|-.. + . .....+.+| ...+..++|+|++.
T Consensus 64 H~~aVN~vRf~p-~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h------~~diydL~Ws~d~~ 136 (434)
T KOG1009|consen 64 HTRAVNVVRFSP-DGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGH------RDDIYDLAWSPDSN 136 (434)
T ss_pred CcceeEEEEEcC-CcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEeccc------ccchhhhhccCCCc
Confidence 788999999999 89999999999999999765 2 1 112233444 67899999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 67 LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 67 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++++.|+.+++||+..|.....+..|...++.++|.|..+++++-+.|
T Consensus 137 ~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~d 186 (434)
T KOG1009|consen 137 FLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSD 186 (434)
T ss_pred eeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccC
Confidence 99999999999999999999999999999999999999999998876654
No 93
>KOG0310|consensus
Probab=99.71 E-value=5.4e-16 Score=93.71 Aligned_cols=107 Identities=22% Similarity=0.289 Sum_probs=90.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.|+..|.+.+|+|-++.++++|+-|+.|++||.... ..+.++.. ..+|..+.+-|.|..+++++ .+.+++|
T Consensus 151 ~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnh-------g~pVe~vl~lpsgs~iasAg-Gn~vkVW 222 (487)
T KOG0310|consen 151 GHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNH-------GCPVESVLALPSGSLIASAG-GNSVKVW 222 (487)
T ss_pred CCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecC-------CCceeeEEEcCCCCEEEEcC-CCeEEEE
Confidence 378899999999977789999999999999999865 55666643 35799999999999999986 4589999
Q ss_pred ECCCCe-EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGK-LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+.+|. .+..+..|...|+++++..++..|+++|.|
T Consensus 223 Dl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD 259 (487)
T KOG0310|consen 223 DLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLD 259 (487)
T ss_pred EecCCceehhhhhcccceEEEEEeecCCceEeecccc
Confidence 998554 455555688999999999999999999876
No 94
>KOG0274|consensus
Probab=99.71 E-value=1.9e-15 Score=95.12 Aligned_cols=111 Identities=24% Similarity=0.321 Sum_probs=97.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------- 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------- 50 (116)
.|.+.|.++++.. .+.++++|+.|.++++||..+++....+.+|....
T Consensus 247 GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~ 325 (537)
T KOG0274|consen 247 GHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLN 325 (537)
T ss_pred CCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEE
Confidence 4789999999986 78999999999999999999999998888776532
Q ss_pred ---CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 ---SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 ---~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|...|.++..+ +..+++++.|+.|++|++.++++++.+.+|...|.++.+.+. +.+++|+.|
T Consensus 326 l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D 391 (537)
T KOG0274|consen 326 LLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLD 391 (537)
T ss_pred EeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeec
Confidence 477788888876 789999999999999999999999999999999999988776 788888876
No 95
>KOG0313|consensus
Probab=99.71 E-value=3.6e-16 Score=92.30 Aligned_cols=106 Identities=24% Similarity=0.368 Sum_probs=92.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.++|.++.|++ ...+++++.|.+|+.||+.+++...++.+. ..++++..+|...++++++.|..+++||
T Consensus 258 GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~-------ksl~~i~~~~~~~Ll~~gssdr~irl~D 328 (423)
T KOG0313|consen 258 GHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTN-------KSLNCISYSPLSKLLASGSSDRHIRLWD 328 (423)
T ss_pred ccccceeeEEEcC--CCceEeecccceEEEEEeecccceeeeecC-------cceeEeecccccceeeecCCCCceeecC
Confidence 4789999999986 488999999999999999999988888776 4689999999999999999999999999
Q ss_pred CCCC---eEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 82 NVSG---KLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 82 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
.+++ ...+++.+|...|..+.|+|... +|++++.|
T Consensus 329 PR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D 367 (423)
T KOG0313|consen 329 PRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD 367 (423)
T ss_pred CCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecC
Confidence 9864 24566889999999999999655 57788876
No 96
>KOG0639|consensus
Probab=99.70 E-value=8.9e-17 Score=98.16 Aligned_cols=103 Identities=15% Similarity=0.141 Sum_probs=88.2
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
.++++.+| +.+.++++..||.|.|||+.....++.|++| ...+.+|.++++|..|.+|+-|++|+.||+++++
T Consensus 512 CyALa~sp-DakvcFsccsdGnI~vwDLhnq~~VrqfqGh------tDGascIdis~dGtklWTGGlDntvRcWDlregr 584 (705)
T KOG0639|consen 512 CYALAISP-DAKVCFSCCSDGNIAVWDLHNQTLVRQFQGH------TDGASCIDISKDGTKLWTGGLDNTVRCWDLREGR 584 (705)
T ss_pred hhhhhcCC-ccceeeeeccCCcEEEEEcccceeeecccCC------CCCceeEEecCCCceeecCCCccceeehhhhhhh
Confidence 46678899 7789999999999999999988899999999 6789999999999999999999999999998752
Q ss_pred ----------------------------------------EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 87 ----------------------------------------LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 87 ----------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
...++..|+..|.++.|.+.|+|+++.+.|
T Consensus 585 qlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkD 654 (705)
T KOG0639|consen 585 QLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKD 654 (705)
T ss_pred hhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCch
Confidence 122233567788999999999999988775
No 97
>KOG0640|consensus
Probab=99.70 E-value=2.4e-16 Score=91.44 Aligned_cols=109 Identities=16% Similarity=0.226 Sum_probs=91.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.++.|+| ....|++++.|+.|+++|.......+.++.-.. ...+.++.|+|.|.+++.+.+-..+++||+
T Consensus 171 H~devn~l~FHP-re~ILiS~srD~tvKlFDfsK~saKrA~K~~qd----~~~vrsiSfHPsGefllvgTdHp~~rlYdv 245 (430)
T KOG0640|consen 171 HVDEVNDLDFHP-RETILISGSRDNTVKLFDFSKTSAKRAFKVFQD----TEPVRSISFHPSGEFLLVGTDHPTLRLYDV 245 (430)
T ss_pred ccCcccceeecc-hhheEEeccCCCeEEEEecccHHHHHHHHHhhc----cceeeeEeecCCCceEEEecCCCceeEEec
Confidence 678899999999 779999999999999999985444334433221 357999999999999999999999999999
Q ss_pred CCCeEEEEee---cccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+-++...-. +|.+.|.++.+++.+++.+|+|.|
T Consensus 246 ~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkD 282 (430)
T KOG0640|consen 246 NTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKD 282 (430)
T ss_pred cceeEeeecCcccccccceeEEEecCCccEEEEeccC
Confidence 9888765543 678899999999999999999987
No 98
>KOG1446|consensus
Probab=99.70 E-value=2.5e-15 Score=86.72 Aligned_cols=108 Identities=16% Similarity=0.209 Sum_probs=92.5
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
..+.+.+.|+| +|+.++.+...+.+++.|.-+|.....+..+... .......++.||++++.+++.||+|.+|+++
T Consensus 187 ~~ew~~l~FS~-dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~---~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 187 EAEWTDLEFSP-DGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNA---GNLPLSATFTPDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred ccceeeeEEcC-CCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCC---CCcceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence 45678999999 8899999999999999999999988888776431 1223678899999999999999999999999
Q ss_pred CCeEEEEeec-ccccEEEEEECCCCcEEEeeec
Q psy17133 84 SGKLVHSMVA-HLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 84 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
++..+..+.+ +.+.+.++.|+|...++++++.
T Consensus 263 tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s 295 (311)
T KOG1446|consen 263 TGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASS 295 (311)
T ss_pred CCcEeeEecCCCCCCccccccCCceeeeeecCc
Confidence 9999998887 5778999999999999988764
No 99
>KOG0281|consensus
Probab=99.69 E-value=2.7e-17 Score=96.60 Aligned_cols=102 Identities=21% Similarity=0.294 Sum_probs=89.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|..+.|+. +++++++.|.++++|++.+++.+..+.+| ...|.++.+ .++++++|+.|++|++||
T Consensus 318 GHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gH------kRGIAClQY--r~rlvVSGSSDntIRlwd 386 (499)
T KOG0281|consen 318 GHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGH------KRGIACLQY--RDRLVVSGSSDNTIRLWD 386 (499)
T ss_pred hhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhcc------cccceehhc--cCeEEEecCCCceEEEEe
Confidence 3667788888864 69999999999999999999999999999 567777766 588999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++.|.+++.+.+|+.-|+++.|+ .+.+++|+.|
T Consensus 387 i~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYD 419 (499)
T KOG0281|consen 387 IECGACLRVLEGHEELVRCIRFD--NKRIVSGAYD 419 (499)
T ss_pred ccccHHHHHHhchHHhhhheeec--Cceeeecccc
Confidence 99999999999999999999994 4567777765
No 100
>KOG0640|consensus
Probab=99.69 E-value=3.6e-16 Score=90.76 Aligned_cols=109 Identities=28% Similarity=0.325 Sum_probs=92.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...|.+++|+| .|.++++|.+...+++||+++-+.-..-. +..+|.+.|+++.+++.+++.++++.||.|++||--
T Consensus 216 ~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~Qcfvsan---Pd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGV 291 (430)
T KOG0640|consen 216 TEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFVSAN---PDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGV 291 (430)
T ss_pred cceeeeEeecC-CCceEEEecCCCceeEEeccceeEeeecC---cccccccceeEEEecCCccEEEEeccCCcEEeeccc
Confidence 45789999999 89999999999999999999876543332 223457889999999999999999999999999988
Q ss_pred CCeEEEEee-ccc-ccEEEEEECCCCcEEEeeecC
Q psy17133 84 SGKLVHSMV-AHL-DAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 ~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.++. .|. ..|-+..|..+++++++.+.|
T Consensus 292 S~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~D 326 (430)
T KOG0640|consen 292 SNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKD 326 (430)
T ss_pred cHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCc
Confidence 888888775 343 478899999999999998876
No 101
>KOG0306|consensus
Probab=99.68 E-value=1.4e-15 Score=96.40 Aligned_cols=106 Identities=14% Similarity=0.176 Sum_probs=98.6
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+..|.|+.++| ++.+|+++-.|.++++|-+.+.+.-..+.+| .-+|.++.++||++.+++++.|..|++|-++
T Consensus 508 ~ddvL~v~~Sp-dgk~LaVsLLdnTVkVyflDtlKFflsLYGH------kLPV~smDIS~DSklivTgSADKnVKiWGLd 580 (888)
T KOG0306|consen 508 EDDVLCVSVSP-DGKLLAVSLLDNTVKVYFLDTLKFFLSLYGH------KLPVLSMDISPDSKLIVTGSADKNVKIWGLD 580 (888)
T ss_pred cccEEEEEEcC-CCcEEEEEeccCeEEEEEecceeeeeeeccc------ccceeEEeccCCcCeEEeccCCCceEEeccc
Confidence 46789999999 8899999999999999999998888888888 6789999999999999999999999999999
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
-|.+-+.+.+|...|.++.|-|+...+.++|.|
T Consensus 581 FGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD 613 (888)
T KOG0306|consen 581 FGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKD 613 (888)
T ss_pred cchhhhhhhcccCceeEEEEcccceeEEEecCc
Confidence 999999999999999999999998899999876
No 102
>KOG1034|consensus
Probab=99.67 E-value=4e-15 Score=86.73 Aligned_cols=107 Identities=20% Similarity=0.246 Sum_probs=91.2
Q ss_pred CCCceEEEEccC---CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEE
Q psy17133 4 NGTPTSIDFVRD---ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRF 79 (116)
Q Consensus 4 ~~~v~~~~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~ 79 (116)
....+.++|+-+ ...++++++.-|.|++.|+.+++....+.+| ...|+.+.++|+. .++++++.|..|++
T Consensus 89 ~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~gh------G~sINeik~~p~~~qlvls~SkD~svRl 162 (385)
T KOG1034|consen 89 DESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGH------GGSINEIKFHPDRPQLVLSASKDHSVRL 162 (385)
T ss_pred CcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceecc------CccchhhhcCCCCCcEEEEecCCceEEE
Confidence 344555666542 1347788888999999999999999999999 6789999999985 68999999999999
Q ss_pred EECCCCeEEEEee---cccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++++..++..+. +|.+.|.++.|+++|.+|++++.|
T Consensus 163 wnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmD 202 (385)
T KOG1034|consen 163 WNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMD 202 (385)
T ss_pred EeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCc
Confidence 9999999988875 688899999999999999999876
No 103
>KOG0322|consensus
Probab=99.67 E-value=3.3e-16 Score=88.92 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=89.5
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--Cc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--GK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
|.|.++|.++.|.+ ..+.=++++.+..+..|+++. +. ...+.+.. ...+..+.+.||+++++++++|+.
T Consensus 202 ash~qpvlsldyas-~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lk------npGv~gvrIRpD~KIlATAGWD~R 274 (323)
T KOG0322|consen 202 ASHKQPVLSLDYAS-SCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLK------NPGVSGVRIRPDGKILATAGWDHR 274 (323)
T ss_pred hhccCcceeeeech-hhcCCcCCCccccceeeeeccccCcccccceEEec------CCCccceEEccCCcEEeecccCCc
Confidence 34778899999987 445556677788888888763 32 22333333 346899999999999999999999
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++|..++...+..++.|.+.+++++|+|+...+|.+|.|
T Consensus 275 iRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD 314 (323)
T KOG0322|consen 275 IRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKD 314 (323)
T ss_pred EEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCC
Confidence 9999999999999999999999999999999999999887
No 104
>KOG1274|consensus
Probab=99.66 E-value=5.8e-15 Score=94.98 Aligned_cols=114 Identities=12% Similarity=0.142 Sum_probs=91.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--CCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV--SGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
.|.++|.++.|+| ++++|++.+-||.|++|++.++.....+.+-.... .....+..++|+|++..++....|+.|++
T Consensus 136 gh~apVl~l~~~p-~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkv 214 (933)
T KOG1274|consen 136 GHDAPVLQLSYDP-KGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKV 214 (933)
T ss_pred ccCCceeeeeEcC-CCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEE
Confidence 4789999999999 88999999999999999999887766665432211 11234678999999888888888999999
Q ss_pred EECCCCeEEEEeec--ccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVA--HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+....+....+.. +...+..+.|+|.|+|||+++.|
T Consensus 215 y~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~ 253 (933)
T KOG1274|consen 215 YSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLD 253 (933)
T ss_pred EccCCceeheeecccccccceEEEEEcCCCcEEeeeccC
Confidence 99998888777763 33458899999999999998754
No 105
>KOG2110|consensus
Probab=99.66 E-value=2.1e-14 Score=84.64 Aligned_cols=103 Identities=18% Similarity=0.240 Sum_probs=84.8
Q ss_pred CceEEEEccCCCcEEEEee--CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe-EEEEEC
Q psy17133 6 TPTSIDFVRDESTKMVTAF--DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH-IRFFDN 82 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-i~~~~~ 82 (116)
.+.++++++ ++.+++.-+ ..|.|.+||..+-+++..+..| .+.+.+++|+++|.++|++++.|+ ||++.+
T Consensus 131 gl~AlS~n~-~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH------~~~lAalafs~~G~llATASeKGTVIRVf~v 203 (391)
T KOG2110|consen 131 GLCALSPNN-ANCYLAYPGSTTSGDVVLFDTINLQPVNTINAH------KGPLAALAFSPDGTLLATASEKGTVIRVFSV 203 (391)
T ss_pred ceEeeccCC-CCceEEecCCCCCceEEEEEcccceeeeEEEec------CCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence 355555555 445666543 4789999999999999999999 789999999999999999999886 899999
Q ss_pred CCCeEEEEeecc--cccEEEEEECCCCcEEEeeec
Q psy17133 83 VSGKLVHSMVAH--LDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 83 ~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.+|+.+..++.. ...|.+++|+|++++|+..|.
T Consensus 204 ~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~ 238 (391)
T KOG2110|consen 204 PEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSN 238 (391)
T ss_pred CCccEeeeeeCCceeeEEEEEEECCCCCeEEEecC
Confidence 999999998733 346889999999999986653
No 106
>KOG1408|consensus
Probab=99.66 E-value=2.6e-15 Score=95.25 Aligned_cols=108 Identities=26% Similarity=0.304 Sum_probs=98.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+++++..| ..++++++++|+.|+||+++.+++++.|++... |.+....+...|.|.++++.+.|.++.++|..+
T Consensus 597 tTlYDm~Vdp-~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~---~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s 672 (1080)
T KOG1408|consen 597 TTLYDMAVDP-TSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRD---HEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS 672 (1080)
T ss_pred ceEEEeeeCC-CcceEEEEecccceEEEeccccceeeeeccccc---CCCceEEEEECCCccEEEEeecCCceEEEEecc
Confidence 4578899999 789999999999999999999999999998743 357788899999999999999999999999999
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++..+.+|...|+.+.|.+|.+.|++.+.|
T Consensus 673 gEcvA~m~GHsE~VTG~kF~nDCkHlISvsgD 704 (1080)
T KOG1408|consen 673 GECVAQMTGHSEAVTGVKFLNDCKHLISVSGD 704 (1080)
T ss_pred chhhhhhcCcchheeeeeecccchhheeecCC
Confidence 99999999999999999999999999998876
No 107
>KOG0313|consensus
Probab=99.65 E-value=4.8e-15 Score=87.65 Aligned_cols=105 Identities=20% Similarity=0.211 Sum_probs=89.7
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRF 79 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~ 79 (116)
....++++++| ..++|++|+.+..+++||.+++. ....+.+| .+-|.++.|+|.. ..+++++-|+++++
T Consensus 300 ~ksl~~i~~~~-~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH------~nwVssvkwsp~~~~~~~S~S~D~t~kl 372 (423)
T KOG0313|consen 300 NKSLNCISYSP-LSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGH------KNWVSSVKWSPTNEFQLVSGSYDNTVKL 372 (423)
T ss_pred CcceeEeeccc-ccceeeecCCCCceeecCCCCCCCceeEEeeecc------hhhhhheecCCCCceEEEEEecCCeEEE
Confidence 46688999999 78999999999999999998653 45677788 6789999999975 47788999999999
Q ss_pred EECCCCe-EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGK-LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||+++.+ ++..+.+|...|.++.|+.. ..+++|+.|
T Consensus 373 WDvRS~k~plydI~~h~DKvl~vdW~~~-~~IvSGGaD 409 (423)
T KOG0313|consen 373 WDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLIVSGGAD 409 (423)
T ss_pred EEeccCCCcceeeccCCceEEEEeccCC-ceEEeccCc
Confidence 9999877 88999999999999999754 577788766
No 108
>KOG1446|consensus
Probab=99.65 E-value=3.8e-14 Score=81.95 Aligned_cols=106 Identities=25% Similarity=0.373 Sum_probs=93.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~~~ 81 (116)
.+.|.++.|++ +|..+++++.|..+++||..+++++..+..+ ...+..++|......+..++. |.+|+.-+
T Consensus 14 ~~~i~sl~fs~-~G~~litss~dDsl~LYd~~~g~~~~ti~sk------kyG~~~~~Fth~~~~~i~sStk~d~tIryLs 86 (311)
T KOG1446|consen 14 NGKINSLDFSD-DGLLLITSSEDDSLRLYDSLSGKQVKTINSK------KYGVDLACFTHHSNTVIHSSTKEDDTIRYLS 86 (311)
T ss_pred CCceeEEEecC-CCCEEEEecCCCeEEEEEcCCCceeeEeecc------cccccEEEEecCCceEEEccCCCCCceEEEE
Confidence 57899999998 8999999999999999999999999999877 456788888766555554444 88999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+.+.++.+.+|...|..++.+|-+..+++++.|
T Consensus 87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D 121 (311)
T KOG1446|consen 87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLD 121 (311)
T ss_pred eecCceEEEcCCCCceEEEEEecCCCCeEEecccC
Confidence 99999999999999999999999999999999876
No 109
>KOG0308|consensus
Probab=99.65 E-value=6.5e-15 Score=92.08 Aligned_cols=113 Identities=17% Similarity=0.302 Sum_probs=94.5
Q ss_pred CCCCceEEEE-ccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCC---cCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 3 YNGTPTSIDF-VRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQ---FGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 3 ~~~~v~~~~~-~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
|...|.|+++ .+ +...+++|+-|+.|.+||++++ +.+..+..-. ...++...+.+++.++.+..+++|+..+.
T Consensus 116 H~DYVkcla~~ak-~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~ 194 (735)
T KOG0308|consen 116 HKDYVKCLAYIAK-NNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD 194 (735)
T ss_pred ccchheeeeeccc-CceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc
Confidence 6788999999 55 7788999999999999999977 3333332111 11134567899999999999999999999
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++||.++++.+-.+.+|..-|+.+..++||..++++|.|
T Consensus 195 lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSD 234 (735)
T KOG0308|consen 195 LRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSD 234 (735)
T ss_pred eEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCC
Confidence 9999999999988899999999999999999999999876
No 110
>KOG0303|consensus
Probab=99.64 E-value=4.2e-15 Score=88.43 Aligned_cols=105 Identities=15% Similarity=0.213 Sum_probs=91.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|..+|.-+.|+|.-.+.|++++.|..|.+|++.+++.+..+. | ...|.+++|+.+|.++++.+.|..|++||
T Consensus 129 gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-h------pd~i~S~sfn~dGs~l~TtckDKkvRv~d 201 (472)
T KOG0303|consen 129 GHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-H------PDMVYSMSFNRDGSLLCTTCKDKKVRVID 201 (472)
T ss_pred ecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-C------CCeEEEEEeccCCceeeeecccceeEEEc
Confidence 4778899999999878899999999999999999999888877 6 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccc-cEEEEEECCCCcEEEee
Q psy17133 82 NVSGKLVHSMVAHLD-AVTSLAVDPQGLYILSG 113 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~ 113 (116)
.++++.+..-.+|.+ ......|-.++..+.||
T Consensus 202 pr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG 234 (472)
T KOG0303|consen 202 PRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG 234 (472)
T ss_pred CCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence 999999888766665 55677788888844443
No 111
>KOG0299|consensus
Probab=99.63 E-value=1.7e-15 Score=91.12 Aligned_cols=107 Identities=12% Similarity=0.144 Sum_probs=94.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.+.+++.++ +++++++|+.+..+.||+..+.+.+..+++| .+.|.+++|...-.-+++++.|+.+++|++
T Consensus 201 h~keil~~avS~-Dgkylatgg~d~~v~Iw~~~t~ehv~~~~gh------r~~V~~L~fr~gt~~lys~s~Drsvkvw~~ 273 (479)
T KOG0299|consen 201 HVKEILTLAVSS-DGKYLATGGRDRHVQIWDCDTLEHVKVFKGH------RGAVSSLAFRKGTSELYSASADRSVKVWSI 273 (479)
T ss_pred ccceeEEEEEcC-CCcEEEecCCCceEEEecCcccchhhccccc------ccceeeeeeecCccceeeeecCCceEEEeh
Confidence 678899999999 8999999999999999999999999999999 678999999988788999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+....+.++.+|...|..+.-..-.+.+..|+.|
T Consensus 274 ~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrD 307 (479)
T KOG0299|consen 274 DQLSYVETLYGHQDGVLGIDALSRERCVTVGGRD 307 (479)
T ss_pred hHhHHHHHHhCCccceeeechhcccceEEecccc
Confidence 9888888888888888888776666666666554
No 112
>KOG0267|consensus
Probab=99.63 E-value=7.7e-16 Score=97.06 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=99.6
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
+.|...+..+.|+| -+.+.+.++.+..+.+||.....+...+.+| ...+..++|+|+|++++.+++|..+++|
T Consensus 109 tgh~~~~~sv~f~P-~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~------~~vv~~l~lsP~Gr~v~~g~ed~tvki~ 181 (825)
T KOG0267|consen 109 TGHLLNITSVDFHP-YGEFFASGSTDTDLKIWDIRKKGCSHTYKSH------TRVVDVLRLSPDGRWVASGGEDNTVKIW 181 (825)
T ss_pred hccccCcceeeecc-ceEEeccccccccceehhhhccCceeeecCC------cceeEEEeecCCCceeeccCCcceeeee
Confidence 35778889999999 7788899999999999999988889999988 6789999999999999999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|...|+....|..|...+..+.|+|..-.+++||.|
T Consensus 182 d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d 217 (825)
T KOG0267|consen 182 DLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSD 217 (825)
T ss_pred cccccccccccccccccccccccCchhhhhccCCCC
Confidence 999999999999999999999999988888888765
No 113
>KOG0270|consensus
Probab=99.63 E-value=3.9e-15 Score=89.34 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=63.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~ 80 (116)
.|+..|.+++|+....+.|++|+.|.+|.+||+.++++...+..| ...|.++.|+|. ...+++|+.|+++.+.
T Consensus 241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~------~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~ 314 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHH------GKKVQTLEWHPYEPSVLLSGSYDGTVALK 314 (463)
T ss_pred cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhc------CCceeEEEecCCCceEEEeccccceEEee
Confidence 367778889998867789999999999999999999998888877 567888888886 4577788888888888
Q ss_pred ECC
Q psy17133 81 DNV 83 (116)
Q Consensus 81 ~~~ 83 (116)
|.+
T Consensus 315 D~R 317 (463)
T KOG0270|consen 315 DCR 317 (463)
T ss_pred ecc
Confidence 776
No 114
>KOG0772|consensus
Probab=99.63 E-value=1.1e-15 Score=93.58 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=80.2
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
.++.++|+| ++..|++|..||.|.+|+..... +...+ ..|.. ...|+++.|+++|++|++-+.|+++++||+
T Consensus 319 ~~tsC~~nr-dg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~----g~~Itsi~FS~dg~~LlSRg~D~tLKvWDL 393 (641)
T KOG0772|consen 319 PVTSCAWNR-DGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLP----GQDITSISFSYDGNYLLSRGFDDTLKVWDL 393 (641)
T ss_pred CceeeecCC-CcchhhhcccCCceeeeecCCcccccceEeeeccCC----CCceeEEEeccccchhhhccCCCceeeeec
Confidence 468899999 88999999999999999985432 22222 34422 347999999999999999999999999999
Q ss_pred CCCe-EEEEeec--ccccEEEEEECCCCcEEEeee
Q psy17133 83 VSGK-LVHSMVA--HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 83 ~~~~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~s 114 (116)
++.+ .+....+ ....-+.++|+|+.+.|++|+
T Consensus 394 rq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGt 428 (641)
T KOG0772|consen 394 RQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGT 428 (641)
T ss_pred cccccchhhhcCCCccCCCCccccCCCceEEEecc
Confidence 8643 4444332 223457889999999999875
No 115
>KOG0299|consensus
Probab=99.62 E-value=1.6e-14 Score=87.11 Aligned_cols=114 Identities=19% Similarity=0.163 Sum_probs=94.9
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE-EEec------CCc----C-cCCCCceeEEEEcCCCCEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV-RIDS------SQF----G-VSGGGGINRVVCHPTLPLTI 69 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~------~~~----~-~~~~~~i~~~~~~~~~~~~~ 69 (116)
.|.-++.++.++| +..+.++++.++.|.-|++.+++... .++. |.. . ..|...+.++++++|+++++
T Consensus 140 ~H~~s~~~vals~-d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyla 218 (479)
T KOG0299|consen 140 KHQLSVTSVALSP-DDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLA 218 (479)
T ss_pred cccCcceEEEeec-cccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEE
Confidence 4778899999999 77999999999999999998876441 1111 111 1 14466789999999999999
Q ss_pred EEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 70 TAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 70 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++.|..|.||+.++.+.++.+.+|.+.|.+++|-.....|+++|.|
T Consensus 219 tgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~D 265 (479)
T KOG0299|consen 219 TGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASAD 265 (479)
T ss_pred ecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecC
Confidence 99999999999999999999999999999999998877788888765
No 116
>KOG2096|consensus
Probab=99.62 E-value=1.7e-14 Score=84.18 Aligned_cols=111 Identities=17% Similarity=0.182 Sum_probs=81.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee------EEEec-C------------------CcC-------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV------VRIDS-S------------------QFG------- 49 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~------~~~~~-~------------------~~~------- 49 (116)
.|.+.|++++|+. +|+.|++++.|+.|++|++.+-... ..++. | ...
T Consensus 84 gH~~~vt~~~FsS-dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~ 162 (420)
T KOG2096|consen 84 GHKKEVTDVAFSS-DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKL 162 (420)
T ss_pred ccCCceeeeEEcC-CCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEe
Confidence 3778999999998 8999999999999999998742110 00000 0 000
Q ss_pred ---------------------cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCc
Q psy17133 50 ---------------------VSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGL 108 (116)
Q Consensus 50 ---------------------~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 108 (116)
.-|.-.+..+.+.-.++++.+++.|..|.+|+++ |+.+..+......-...+.+|+|+
T Consensus 163 ~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GR 241 (420)
T KOG2096|consen 163 VKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGR 241 (420)
T ss_pred eecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCc
Confidence 0223344455666678899999999999999999 999888876655667788899999
Q ss_pred EEEeee
Q psy17133 109 YILSGT 114 (116)
Q Consensus 109 ~l~~~s 114 (116)
++++++
T Consensus 242 Fia~~g 247 (420)
T KOG2096|consen 242 FIAVSG 247 (420)
T ss_pred EEEEec
Confidence 999875
No 117
>KOG0639|consensus
Probab=99.61 E-value=6.5e-15 Score=90.22 Aligned_cols=106 Identities=16% Similarity=0.309 Sum_probs=90.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
...+..+.+.| +++.|++|+.-..+.|||+....+.. ++... .-....++++||.++.+++..||.|.|||
T Consensus 465 dnyiRSckL~p-dgrtLivGGeastlsiWDLAapTprikaeltss------apaCyALa~spDakvcFsccsdGnI~vwD 537 (705)
T KOG0639|consen 465 DNYIRSCKLLP-DGRTLIVGGEASTLSIWDLAAPTPRIKAELTSS------APACYALAISPDAKVCFSCCSDGNIAVWD 537 (705)
T ss_pred ccceeeeEecC-CCceEEeccccceeeeeeccCCCcchhhhcCCc------chhhhhhhcCCccceeeeeccCCcEEEEE
Confidence 34678889999 88999999999999999998654432 33322 23467789999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+...++.+.+|...+.++..+++|..|-||+.|
T Consensus 538 Lhnq~~VrqfqGhtDGascIdis~dGtklWTGGlD 572 (705)
T KOG0639|consen 538 LHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLD 572 (705)
T ss_pred cccceeeecccCCCCCceeEEecCCCceeecCCCc
Confidence 99999999999999999999999999999998865
No 118
>KOG1007|consensus
Probab=99.61 E-value=6.5e-15 Score=84.77 Aligned_cols=105 Identities=23% Similarity=0.300 Sum_probs=82.4
Q ss_pred CceEEEEcc-CCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECC
Q psy17133 6 TPTSIDFVR-DESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNV 83 (116)
Q Consensus 6 ~v~~~~~~~-~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~ 83 (116)
..++-.|+| .+++.+++.+ ++.+..||+++.++...++.. |...+..+.|+|+.. +++++++|+.|++||.+
T Consensus 172 ~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dA-----Hgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R 245 (370)
T KOG1007|consen 172 SFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDA-----HGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR 245 (370)
T ss_pred eecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhh-----hcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence 345667888 4677777765 789999999988877776533 145689999999854 78999999999999997
Q ss_pred C-CeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133 84 S-GKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ 116 (116)
Q Consensus 84 ~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d 116 (116)
. ...++.+.+|...+.++.|+|.. +.+++++.|
T Consensus 246 ~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD 280 (370)
T KOG1007|consen 246 KTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSD 280 (370)
T ss_pred CCCccccccCCCceEEEEEEecCccceEEEecCCC
Confidence 4 55678888999999999999964 455677655
No 119
>KOG0269|consensus
Probab=99.60 E-value=6.2e-15 Score=93.57 Aligned_cols=104 Identities=14% Similarity=0.248 Sum_probs=84.4
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
...|.++.|+|..++.++++.++|.+++||++. .+....+..| .+.+.++.|+|++.+||+|+.|+.|+||++
T Consensus 176 SESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH------~GpV~c~nwhPnr~~lATGGRDK~vkiWd~ 249 (839)
T KOG0269|consen 176 SESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAH------NGPVLCLNWHPNREWLATGGRDKMVKIWDM 249 (839)
T ss_pred chhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcc------cCceEEEeecCCCceeeecCCCccEEEEec
Confidence 467899999998888999999999999999984 3456677788 789999999999999999999999999999
Q ss_pred CCCeEEEEee-cccccEEEEEECCCCcE-EEee
Q psy17133 83 VSGKLVHSMV-AHLDAVTSLAVDPQGLY-ILSG 113 (116)
Q Consensus 83 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~-l~~~ 113 (116)
.+++...... .-..++.+++|-|+.++ |+++
T Consensus 250 t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtc 282 (839)
T KOG0269|consen 250 TDSRAKPKHTINTIAPVGRVKWRPARSYHLATC 282 (839)
T ss_pred cCCCccceeEEeecceeeeeeeccCccchhhhh
Confidence 8655432222 23467899999998765 4444
No 120
>KOG0268|consensus
Probab=99.60 E-value=3.7e-15 Score=87.86 Aligned_cols=105 Identities=20% Similarity=0.356 Sum_probs=89.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..|.++.|+|.+...|+++..|+.+.+||+.+++++..+... ...+.++|+|..--+.++++|..+..+|++.
T Consensus 188 Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~-------mRTN~IswnPeafnF~~a~ED~nlY~~DmR~ 260 (433)
T KOG0268|consen 188 DSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT-------MRTNTICWNPEAFNFVAANEDHNLYTYDMRN 260 (433)
T ss_pred CceeEEecCCCcchheeeeccCCceEEEecccCCccceeeee-------ccccceecCccccceeeccccccceehhhhh
Confidence 457889999977778888889999999999999988877544 3578999999777888899999999999975
Q ss_pred C-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 85 G-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 85 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
- +.+....+|...|.++.|+|.|+-+++||.|
T Consensus 261 l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyD 293 (433)
T KOG0268|consen 261 LSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYD 293 (433)
T ss_pred hcccchhhcccceeEEEeccCCCcchhcccccc
Confidence 4 4566677888999999999999999999987
No 121
>KOG1063|consensus
Probab=99.59 E-value=2.1e-14 Score=90.29 Aligned_cols=107 Identities=10% Similarity=0.161 Sum_probs=90.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI 77 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 77 (116)
|.-.|++++.+| ++++++++.. ...|++|+..+..++..++.| +-.|+.+.|+||+++|++.+.|+++
T Consensus 524 HGyEv~~l~~s~-~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~H------sLTVT~l~FSpdg~~LLsvsRDRt~ 596 (764)
T KOG1063|consen 524 HGYEVYALAISP-TGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGH------SLTVTRLAFSPDGRYLLSVSRDRTV 596 (764)
T ss_pred CceeEEEEEecC-CCCEEeehhhhCCccceEEEEEeccchhhhheeccc------ceEEEEEEECCCCcEEEEeecCceE
Confidence 555789999999 8899999864 345899999988888889999 6789999999999999999999999
Q ss_pred EEEECCCCeE----EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 78 RFFDNVSGKL----VHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+|....... ....+.|..-|.+..|+|++.+|+|+|+|
T Consensus 597 sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRD 639 (764)
T KOG1063|consen 597 SLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRD 639 (764)
T ss_pred EeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCC
Confidence 9998754322 12255788889999999999999999987
No 122
>KOG1009|consensus
Probab=99.58 E-value=4e-14 Score=84.38 Aligned_cols=113 Identities=17% Similarity=0.248 Sum_probs=84.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE---EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV---RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
..++..+.|.++..+++++++.|..|++|-++.+..-. .++-+..-..|...++.+.|+|+|.+++++++++.+.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 45788999998555599999999999999876432211 111111112337789999999999999999999999999
Q ss_pred ECC--------C-----C---eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNV--------S-----G---KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~--------~-----~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
-.. + . .....+.+|...+..++|+|+++++++++.|
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~d 144 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVD 144 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeecc
Confidence 754 2 1 1234456788899999999999999998865
No 123
>KOG0646|consensus
Probab=99.58 E-value=3.4e-14 Score=85.80 Aligned_cols=106 Identities=13% Similarity=0.116 Sum_probs=91.6
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
.|.+.++.-+| .|.+++.|...+.+++|.+.+|..+..+..|+ ..|+++.|+-|++.+++++.||.|.+|.+.
T Consensus 81 Pg~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~LL~v~~aHY------Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~ 153 (476)
T KOG0646|consen 81 PGPVHALASSN-LGYFLLAGTISGNLYLWELSSGILLNVLSAHY------QSITCLKFSDDGSHIITGSKDGAVLVWLLT 153 (476)
T ss_pred ccceeeeecCC-CceEEEeecccCcEEEEEeccccHHHHHHhhc------cceeEEEEeCCCcEEEecCCCccEEEEEEE
Confidence 57889999999 88999998899999999999999999998885 379999999999999999999999999753
Q ss_pred ---------CCeEEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 84 ---------SGKLVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 84 ---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
+-+.++.+..|.-.|+++...+- ...++|+|.|
T Consensus 154 ~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D 197 (476)
T KOG0646|consen 154 DLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASED 197 (476)
T ss_pred eecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCC
Confidence 34567888889999999987654 4578888876
No 124
>KOG2055|consensus
Probab=99.57 E-value=2.6e-14 Score=86.39 Aligned_cols=108 Identities=13% Similarity=0.138 Sum_probs=87.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
..+|.|..+.|+. ++..|++++.+|.|.+||+.....+..+..... -.-+.++.++++.++|+|+..|.|.|||
T Consensus 342 KieG~v~~~~fsS-dsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~-----v~gts~~~S~ng~ylA~GS~~GiVNIYd 415 (514)
T KOG2055|consen 342 KIEGVVSDFTFSS-DSKELLASGGTGEVYVWNLRQNSCLHRFVDDGS-----VHGTSLCISLNGSYLATGSDSGIVNIYD 415 (514)
T ss_pred eeccEEeeEEEec-CCcEEEEEcCCceEEEEecCCcceEEEEeecCc-----cceeeeeecCCCceEEeccCcceEEEec
Confidence 4568899999997 778888888899999999999988888876521 2346788889999999999999999999
Q ss_pred CCC------CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 82 NVS------GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 82 ~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
..+ .+++..+..-...|+++.|+++.++|+.+|.
T Consensus 416 ~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~ 455 (514)
T KOG2055|consen 416 GNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASR 455 (514)
T ss_pred cchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhh
Confidence 653 3444545445568999999999999987763
No 125
>KOG0771|consensus
Probab=99.57 E-value=1e-13 Score=82.68 Aligned_cols=112 Identities=18% Similarity=0.221 Sum_probs=87.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecC--------------C--c------------Cc---
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS--------------Q--F------------GV--- 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~--------------~--~------------~~--- 50 (116)
.|.+.|.++.|+| ++++|++-+.+ ..++|+.+++..+...... . . ..
T Consensus 184 ~~~~eV~DL~FS~-dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~ 261 (398)
T KOG0771|consen 184 AHHAEVKDLDFSP-DGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLC 261 (398)
T ss_pred hhcCccccceeCC-CCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEE
Confidence 3678999999999 88999999988 9999999887332222100 0 0 00
Q ss_pred -----------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cccccEEEEEECCCCcEEEe
Q psy17133 51 -----------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 51 -----------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~ 112 (116)
.....+.+++++++|++++.++.||.|.+++..+.+.++..+ .|...|+.+.|+|+.+++++
T Consensus 262 ~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 262 DISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLAS 341 (398)
T ss_pred EeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccc
Confidence 123368899999999999999999999999998887776654 68889999999999998887
Q ss_pred eec
Q psy17133 113 GTY 115 (116)
Q Consensus 113 ~s~ 115 (116)
.+.
T Consensus 342 vSs 344 (398)
T KOG0771|consen 342 VSS 344 (398)
T ss_pred ccc
Confidence 554
No 126
>KOG1445|consensus
Probab=99.57 E-value=1.4e-14 Score=91.13 Aligned_cols=109 Identities=17% Similarity=0.114 Sum_probs=90.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|+.+.|+|--.+.|++++.|.+|++||+.+++....+.+| ...|.+++|+|+|+.+++.+.|+++++|+
T Consensus 675 ~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gH------tdqIf~~AWSpdGr~~AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 675 IHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGH------TDQIFGIAWSPDGRRIATVCKDGTLRVYE 748 (1012)
T ss_pred cccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccC------cCceeEEEECCCCcceeeeecCceEEEeC
Confidence 367889999999977789999999999999999999988899999 78999999999999999999999999999
Q ss_pred CCCCeE-EEEeecc-cccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKL-VHSMVAH-LDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~-~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+.++. ++.-.+. ..+--.+.|.-+|++++..+.|
T Consensus 749 Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfd 785 (1012)
T KOG1445|consen 749 PRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFD 785 (1012)
T ss_pred CCCCCCccccCCCCccCcceeEEEEecCcEEEEeccc
Confidence 887654 2222221 2234567788899988876654
No 127
>KOG0300|consensus
Probab=99.57 E-value=3.6e-14 Score=82.99 Aligned_cols=106 Identities=25% Similarity=0.366 Sum_probs=92.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+..|.. +++.+++++-|..-.+||++++..+..+.+| ....+-.+-+|..+++++.+.|.+.++||+
T Consensus 271 H~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGH------d~ELtHcstHptQrLVvTsSrDtTFRLWDF 343 (481)
T KOG0300|consen 271 HRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGH------DSELTHCSTHPTQRLVVTSSRDTTFRLWDF 343 (481)
T ss_pred cccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCc------chhccccccCCcceEEEEeccCceeEeccc
Confidence 677888999988 8999999999999999999999999999999 567888888999999999999999999999
Q ss_pred CCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.. ..+..+.+|...|++..|..+.+. ++++.|
T Consensus 344 ReaI~sV~VFQGHtdtVTS~vF~~dd~v-VSgSDD 377 (481)
T KOG0300|consen 344 REAIQSVAVFQGHTDTVTSVVFNTDDRV-VSGSDD 377 (481)
T ss_pred hhhcceeeeecccccceeEEEEecCCce-eecCCC
Confidence 743 446678899999999999887654 466654
No 128
>KOG0278|consensus
Probab=99.56 E-value=1.2e-14 Score=82.27 Aligned_cols=102 Identities=25% Similarity=0.371 Sum_probs=87.5
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
---|.+++|+. +.+.|++|+.+.-+++||++.. .+..++.+| ++.|..+-|....+.+++...|+.|++||.
T Consensus 100 khivk~~af~~-ds~~lltgg~ekllrvfdln~p~App~E~~gh------tg~Ir~v~wc~eD~~iLSSadd~tVRLWD~ 172 (334)
T KOG0278|consen 100 KHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGH------TGGIRTVLWCHEDKCILSSADDKTVRLWDH 172 (334)
T ss_pred hheeeeEEecc-cchhhhccchHHHhhhhhccCCCCCchhhcCC------CCcceeEEEeccCceEEeeccCCceEEEEe
Confidence 34578899998 8899999999999999999754 356777888 788999999988888888899999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+++..++.+. ....|+++..+++|++|.++
T Consensus 173 rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia 202 (334)
T KOG0278|consen 173 RTGTEVQSLE-FNSPVTSLEVSQDGRILTIA 202 (334)
T ss_pred ccCcEEEEEe-cCCCCcceeeccCCCEEEEe
Confidence 9999998887 45678999999999988653
No 129
>KOG4283|consensus
Probab=99.56 E-value=1.5e-13 Score=79.57 Aligned_cols=105 Identities=17% Similarity=0.245 Sum_probs=89.0
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC---CCEEEEEeCCCeEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT---LPLTITAHDDRHIRFFD 81 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~d~~i~~~~ 81 (116)
-.|..+.|.|-+..++.+++-|..+++||.++-+....|+-. +.|.+-+++|- ..+++++..+-.|++.|
T Consensus 102 y~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me-------~~VYshamSp~a~sHcLiA~gtr~~~VrLCD 174 (397)
T KOG4283|consen 102 YAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKME-------GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCD 174 (397)
T ss_pred eeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecC-------ceeehhhcChhhhcceEEEEecCCCcEEEEe
Confidence 457888999977778888889999999999998887777654 46777788874 34788888899999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEE-EeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYI-LSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~s~d 116 (116)
+++|...+.+.+|.+.|.++.|+|...++ ++|+.|
T Consensus 175 i~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaD 210 (397)
T KOG4283|consen 175 IASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSAD 210 (397)
T ss_pred ccCCcceeeeccccCceEEEEeccCceeEEEecCCC
Confidence 99999999999999999999999988864 677765
No 130
>KOG0647|consensus
Probab=99.56 E-value=3e-13 Score=78.29 Aligned_cols=83 Identities=17% Similarity=0.310 Sum_probs=71.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC--CEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL--PLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~d~~i~~ 79 (116)
-|.++|.++.|+. ++..+++++.|+++++||+.++ ++..+..| ...|..+.|-+.. ..|++|+.|++|+.
T Consensus 70 ~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~H------d~pvkt~~wv~~~~~~cl~TGSWDKTlKf 141 (347)
T KOG0647|consen 70 SHDGPVLDVCWSD-DGSKVFSGGCDKQAKLWDLASG-QVSQVAAH------DAPVKTCHWVPGMNYQCLVTGSWDKTLKF 141 (347)
T ss_pred ccCCCeEEEEEcc-CCceEEeeccCCceEEEEccCC-Ceeeeeec------ccceeEEEEecCCCcceeEecccccceee
Confidence 3789999999997 8899999999999999999988 46677777 6789999888754 48999999999999
Q ss_pred EECCCCeEEEEee
Q psy17133 80 FDNVSGKLVHSMV 92 (116)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (116)
||.+....+.++.
T Consensus 142 WD~R~~~pv~t~~ 154 (347)
T KOG0647|consen 142 WDTRSSNPVATLQ 154 (347)
T ss_pred cccCCCCeeeeee
Confidence 9999887776665
No 131
>KOG1539|consensus
Probab=99.56 E-value=1.5e-13 Score=88.11 Aligned_cols=105 Identities=16% Similarity=0.289 Sum_probs=90.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe---cCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID---SSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
..+++++.++ .|++.+.|...|.|-+|++.+|-....|. .| .+.|++++....++.+++++.+|-+++||
T Consensus 449 ~~~~av~vs~-CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah------~~~V~gla~D~~n~~~vsa~~~Gilkfw~ 521 (910)
T KOG1539|consen 449 INATAVCVSF-CGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAH------KGEVTGLAVDGTNRLLVSAGADGILKFWD 521 (910)
T ss_pred cceEEEEEec-cCceEEEeccCCeEEEEEcccCeeecccccCccc------cCceeEEEecCCCceEEEccCcceEEEEe
Confidence 5678888898 89999999999999999999998888883 44 67899999999999999999999999999
Q ss_pred CCCC-----------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSG-----------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~-----------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
..++ +..+.+.+|...+++++|||||+||++++.|
T Consensus 522 f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD 597 (910)
T KOG1539|consen 522 FKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMD 597 (910)
T ss_pred cCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecC
Confidence 8753 2334455788999999999999999999876
No 132
>KOG2048|consensus
Probab=99.55 E-value=1.5e-13 Score=86.31 Aligned_cols=113 Identities=17% Similarity=0.172 Sum_probs=90.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcC--CCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVS--GGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
.+.+++.+++|+| ++..++.|+.|+.|++||..+++.+....-...... ...-+.++.+-. ...+++|...|+|.+
T Consensus 152 rq~sRvLslsw~~-~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~tI~sgDS~G~V~F 229 (691)
T KOG2048|consen 152 RQKSRVLSLSWNP-TGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-DSTIASGDSAGTVTF 229 (691)
T ss_pred cccceEEEEEecC-CccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-cCcEEEecCCceEEE
Confidence 4568999999999 778899999999999999998887663322211111 123356666553 457899999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||...+.+++....|.+.|.+++-++++.++++++.|
T Consensus 230 Wd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd 266 (691)
T KOG2048|consen 230 WDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVD 266 (691)
T ss_pred EcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCC
Confidence 9999999999999999999999999999999888765
No 133
>KOG0646|consensus
Probab=99.55 E-value=6.4e-13 Score=80.45 Aligned_cols=107 Identities=20% Similarity=0.283 Sum_probs=88.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC---------CceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET---------GKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTIT 70 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~ 70 (116)
.|...|+++.|+- ++.++++++.|+.|.+|++.+ -+++..|..| .-.|+++.+.+- ...+++
T Consensus 121 aHYQ~ITcL~fs~-dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~H------tlsITDl~ig~Gg~~~rl~T 193 (476)
T KOG0646|consen 121 AHYQSITCLKFSD-DGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDH------TLSITDLQIGSGGTNARLYT 193 (476)
T ss_pred hhccceeEEEEeC-CCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccC------cceeEEEEecCCCccceEEE
Confidence 4778999999997 889999999999999998642 2345566666 678999888765 458999
Q ss_pred EeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 71 AHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 71 ~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++.|.++++||+..+.++..+. ....+.+++.+|-.+.++.|+.|
T Consensus 194 aS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~ 238 (476)
T KOG0646|consen 194 ASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEE 238 (476)
T ss_pred ecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCc
Confidence 9999999999999999888776 45578999999998888887654
No 134
>KOG1036|consensus
Probab=99.55 E-value=3.9e-13 Score=77.80 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=86.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
....|..+.|+| .++.|++++-|+.+++|+.........++.. .++.+.+|.+ ...+++++-|+.|+.+|+
T Consensus 12 P~d~IS~v~f~~-~~~~LLvssWDgslrlYdv~~~~l~~~~~~~-------~plL~c~F~d-~~~~~~G~~dg~vr~~Dl 82 (323)
T KOG1036|consen 12 PEDGISSVKFSP-SSSDLLVSSWDGSLRLYDVPANSLKLKFKHG-------APLLDCAFAD-ESTIVTGGLDGQVRRYDL 82 (323)
T ss_pred ChhceeeEEEcC-cCCcEEEEeccCcEEEEeccchhhhhheecC-------CceeeeeccC-CceEEEeccCceEEEEEe
Confidence 356789999998 7788888889999999999877655555543 5788888877 567899999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.++...... .|...++++.+++....+++||+|
T Consensus 83 n~~~~~~ig-th~~~i~ci~~~~~~~~vIsgsWD 115 (323)
T KOG1036|consen 83 NTGNEDQIG-THDEGIRCIEYSYEVGCVISGSWD 115 (323)
T ss_pred cCCcceeec-cCCCceEEEEeeccCCeEEEcccC
Confidence 988776544 488899999999988899999987
No 135
>KOG1273|consensus
Probab=99.54 E-value=8.2e-13 Score=77.12 Aligned_cols=113 Identities=19% Similarity=0.207 Sum_probs=88.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------- 50 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------- 50 (116)
|..+|++++|++ +|.+|++++.|-.+.+||+..|.++..+.-..+.-
T Consensus 64 H~~pi~sl~WS~-dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~ 142 (405)
T KOG1273|consen 64 HVRPITSLCWSR-DGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS 142 (405)
T ss_pred cccceeEEEecC-CCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee
Confidence 778999999999 89999999999999999999887766554332210
Q ss_pred --------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc-ccEEEEEECCCCcEEEeeecC
Q psy17133 51 --------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL-DAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 --------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~d 116 (116)
..........|++.|+++++|...|.+.+++.++-+++..++... ..|..+.++..|+.|+..+.|
T Consensus 143 ~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsD 217 (405)
T KOG1273|consen 143 VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSD 217 (405)
T ss_pred eccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCC
Confidence 000011123367789999999999999999999999888877544 678899999999999887655
No 136
>KOG1538|consensus
Probab=99.54 E-value=6.9e-14 Score=88.52 Aligned_cols=101 Identities=14% Similarity=0.213 Sum_probs=82.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..|..++|-| +|..++.+. +..+.+||.++|..+..+++| ...|.+++|+.+|+.+++|+.|..+.+|..+-
T Consensus 13 hci~d~afkP-DGsqL~lAA-g~rlliyD~ndG~llqtLKgH------KDtVycVAys~dGkrFASG~aDK~VI~W~~kl 84 (1081)
T KOG1538|consen 13 HCINDIAFKP-DGTQLILAA-GSRLLVYDTSDGTLLQPLKGH------KDTVYCVAYAKDGKRFASGSADKSVIIWTSKL 84 (1081)
T ss_pred cchheeEECC-CCceEEEec-CCEEEEEeCCCcccccccccc------cceEEEEEEccCCceeccCCCceeEEEecccc
Confidence 4688999999 666666655 458999999999999999999 66899999999999999999999999999652
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
--.+ .+ .|...|.+|.|+|-...|++++.
T Consensus 85 EG~L-kY-SH~D~IQCMsFNP~~h~LasCsL 113 (1081)
T KOG1538|consen 85 EGIL-KY-SHNDAIQCMSFNPITHQLASCSL 113 (1081)
T ss_pred ccee-ee-ccCCeeeEeecCchHHHhhhcch
Confidence 2121 22 37778889999988888877653
No 137
>KOG1034|consensus
Probab=99.54 E-value=8.1e-14 Score=81.40 Aligned_cols=81 Identities=12% Similarity=0.105 Sum_probs=71.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|..+.+.|.+.+++++++.|..|++|++.+...+..|-+.. +|...|.+++|++++..+++++.|..+++|+
T Consensus 133 ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~e---gHrdeVLSvD~~~~gd~i~ScGmDhslk~W~ 209 (385)
T KOG1034|consen 133 GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVE---GHRDEVLSVDFSLDGDRIASCGMDHSLKLWR 209 (385)
T ss_pred ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccc---cccCcEEEEEEcCCCCeeeccCCcceEEEEe
Confidence 4778899999999888899999999999999999999888875432 2478899999999999999999999999999
Q ss_pred CCCC
Q psy17133 82 NVSG 85 (116)
Q Consensus 82 ~~~~ 85 (116)
+...
T Consensus 210 l~~~ 213 (385)
T KOG1034|consen 210 LNVK 213 (385)
T ss_pred cChh
Confidence 9844
No 138
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.54 E-value=2.8e-12 Score=75.66 Aligned_cols=102 Identities=21% Similarity=0.295 Sum_probs=77.8
Q ss_pred CCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-eCCCeEEEEEC
Q psy17133 5 GTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-HDDRHIRFFDN 82 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d~~i~~~~~ 82 (116)
..+..+.|+| ++..+ +++..++.+++||..+++.+..+..+ ..+..++++|+++.++++ ..++.+++||+
T Consensus 31 ~~~~~l~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~ 102 (300)
T TIGR03866 31 QRPRGITLSK-DGKLLYVCASDSDTIQVIDLATGEVIGTLPSG-------PDPELFALHPNGKILYIANEDDNLVTVIDI 102 (300)
T ss_pred CCCCceEECC-CCCEEEEEECCCCeEEEEECCCCcEEEeccCC-------CCccEEEECCCCCEEEEEcCCCCeEEEEEC
Confidence 3467899999 66655 56677899999999988877766544 235678899999877554 56899999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
++++.+..+.. ...+..++|+|+++++++++.
T Consensus 103 ~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~ 134 (300)
T TIGR03866 103 ETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSE 134 (300)
T ss_pred CCCeEEeEeeC-CCCcceEEECCCCCEEEEEec
Confidence 98877766652 234678999999999987654
No 139
>KOG0649|consensus
Probab=99.54 E-value=5.8e-13 Score=75.40 Aligned_cols=81 Identities=16% Similarity=0.157 Sum_probs=68.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..|.++...|.+ +-++.++.|+.++-||+++|+...++++| +..+.++.-......+.+|++||++++||.++
T Consensus 115 PeINam~ldP~e-nSi~~AgGD~~~y~~dlE~G~i~r~~rGH------tDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt 187 (325)
T KOG0649|consen 115 PEINAMWLDPSE-NSILFAGGDGVIYQVDLEDGRIQREYRGH------TDYVHSVVGRNANGQILSGAEDGTVRVWDTKT 187 (325)
T ss_pred CccceeEeccCC-CcEEEecCCeEEEEEEecCCEEEEEEcCC------cceeeeeeecccCcceeecCCCccEEEEeccc
Confidence 457888899944 55555557999999999999999999999 67899988766667899999999999999999
Q ss_pred CeEEEEee
Q psy17133 85 GKLVHSMV 92 (116)
Q Consensus 85 ~~~~~~~~ 92 (116)
++.++.+.
T Consensus 188 ~k~v~~ie 195 (325)
T KOG0649|consen 188 QKHVSMIE 195 (325)
T ss_pred cceeEEec
Confidence 99888765
No 140
>KOG0302|consensus
Probab=99.54 E-value=2.8e-13 Score=80.39 Aligned_cols=106 Identities=18% Similarity=0.265 Sum_probs=80.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC---CCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE---TGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~ 78 (116)
|.+-|..++|+. .-.+|++|+++|.++|||++ .++++..|+.| ..+|+++.|+|. ...+++++.|..|.
T Consensus 301 h~sDVNVISWnr-~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~H------k~pItsieW~p~e~s~iaasg~D~Qit 373 (440)
T KOG0302|consen 301 HNSDVNVISWNR-REPLLASGGDDGTLSIWDLRQFKSGQPVATFKYH------KAPITSIEWHPHEDSVIAASGEDNQIT 373 (440)
T ss_pred cCCceeeEEccC-CcceeeecCCCceEEEEEhhhccCCCcceeEEec------cCCeeEEEeccccCceEEeccCCCcEE
Confidence 677899999998 55599999999999999997 36788999999 679999999997 46888889999999
Q ss_pred EEECCCCe----------------EEEEeecc--cccEEEEEECCCCc-EEEeeec
Q psy17133 79 FFDNVSGK----------------LVHSMVAH--LDAVTSLAVDPQGL-YILSGTY 115 (116)
Q Consensus 79 ~~~~~~~~----------------~~~~~~~~--~~~v~~~~~~~~~~-~l~~~s~ 115 (116)
+||+..-. ..+.+..| ...+..+.|+++-. ++++.+.
T Consensus 374 iWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~ 429 (440)
T KOG0302|consen 374 IWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAI 429 (440)
T ss_pred EEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecc
Confidence 99975210 01122223 33677888988644 5555443
No 141
>KOG1332|consensus
Probab=99.53 E-value=1.6e-13 Score=77.44 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=85.7
Q ss_pred CCCCCceEEEE-ccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCe
Q psy17133 2 FYNGTPTSIDF-VRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRH 76 (116)
Q Consensus 2 ~~~~~v~~~~~-~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~ 76 (116)
.|.|+|..++| +|.-|.+|++++-|++|.||.-..++- ..+...| ...+++++|.|. |..|++++.||.
T Consensus 54 Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h------~~SVNsV~wapheygl~LacasSDG~ 127 (299)
T KOG1332|consen 54 GHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAH------SASVNSVAWAPHEYGLLLACASSDGK 127 (299)
T ss_pred CCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhh------cccceeecccccccceEEEEeeCCCc
Confidence 48899999999 566789999999999999999886643 3344555 678999999997 558899999999
Q ss_pred EEEEECCCC-e--EEEEeecccccEEEEEECCC---C-----------cEEEeeecC
Q psy17133 77 IRFFDNVSG-K--LVHSMVAHLDAVTSLAVDPQ---G-----------LYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~-~--~~~~~~~~~~~v~~~~~~~~---~-----------~~l~~~s~d 116 (116)
|.+.+.+.. . ..+....|.-.+++++|.|- | +.|++|+.|
T Consensus 128 vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcD 184 (299)
T KOG1332|consen 128 VSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCD 184 (299)
T ss_pred EEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCc
Confidence 999988643 2 22334568889999999986 4 457777765
No 142
>KOG1007|consensus
Probab=99.53 E-value=2.6e-13 Score=78.31 Aligned_cols=108 Identities=19% Similarity=0.192 Sum_probs=84.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~ 80 (116)
|...|.++.|+|+....|+++++|+.|++||.+ +..++.++.+| ..-+.+++|+|. ..++.+++.|..|.+|
T Consensus 213 Hgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~H------sHWvW~VRfn~~hdqLiLs~~SDs~V~Ls 286 (370)
T KOG1007|consen 213 HGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGH------SHWVWAVRFNPEHDQLILSGGSDSAVNLS 286 (370)
T ss_pred hcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCC------ceEEEEEEecCccceEEEecCCCceeEEE
Confidence 456689999999544577889999999999997 45678888888 677999999996 6788999999999999
Q ss_pred ECCCC-----------------------------eEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 81 DNVSG-----------------------------KLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 81 ~~~~~-----------------------------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
....- ..+..+..|...|++++|+.-.. +|++-|.|
T Consensus 287 ca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYD 352 (370)
T KOG1007|consen 287 CASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYD 352 (370)
T ss_pred eccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccC
Confidence 64321 12334567888999999987544 45666654
No 143
>KOG2919|consensus
Probab=99.53 E-value=8.5e-14 Score=81.33 Aligned_cols=109 Identities=14% Similarity=0.196 Sum_probs=88.7
Q ss_pred CCCCceEEEEccCCCcEEEEee-CCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAF-DNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
|.+.|+.+.|.+ +|+.+.+|. .+.+|..||++. +.++..+..|... ++.-..+...|++++|++|+.||.|++|
T Consensus 249 h~gGvThL~~~e-dGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~---TNQRI~FDld~~~~~LasG~tdG~V~vw 324 (406)
T KOG2919|consen 249 HGGGVTHLQWCE-DGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGD---TNQRILFDLDPKGEILASGDTDGSVRVW 324 (406)
T ss_pred cCCCeeeEEecc-CcCeecccccCCCeEEEEeehhccchhhhhhhhccC---ccceEEEecCCCCceeeccCCCccEEEE
Confidence 678899999999 889999887 478899999974 4566666665321 3445566778999999999999999999
Q ss_pred ECCC-CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 81 DNVS-GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 81 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
|++. +.....+..+...+..++++|--.++++++.
T Consensus 325 dlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssG 360 (406)
T KOG2919|consen 325 DLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSG 360 (406)
T ss_pred ecCCCCCcccccccccccccceecCcccceeeeccC
Confidence 9987 7767777778889999999999888888763
No 144
>KOG1310|consensus
Probab=99.53 E-value=1.1e-13 Score=85.77 Aligned_cols=108 Identities=19% Similarity=0.252 Sum_probs=90.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCeEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPT--LPLTITAHDDRHIR 78 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i~ 78 (116)
.|+|.|.++.|+. +|.+|++|++|-.+.|||....+++..+. +| ...|.++.|-|. .++++++..|..|+
T Consensus 48 GH~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgH------taNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 48 GHTGCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLHSISTGH------TANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred cccceecceeecC-CCCEEeecCCcceEEeecchhcceeeeeeccc------ccceeEEeeeccCCCeEEEeccCcceEE
Confidence 4889999999998 89999999999999999999888888774 55 678999999984 57999999999999
Q ss_pred EEECCC----------CeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133 79 FFDNVS----------GKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d 116 (116)
++|+.. .+..+.+..|...|..++-.|++ ..+-+++.|
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasED 169 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASED 169 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCC
Confidence 999874 12344456788889999999988 566677765
No 145
>KOG0301|consensus
Probab=99.53 E-value=2.7e-13 Score=85.45 Aligned_cols=103 Identities=16% Similarity=0.170 Sum_probs=90.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|+..|.++..-| + +.+++|+.|..|++|.- ++.+.+|.+| ...|..+++-++. .+++++.||.|++|+
T Consensus 138 gH~asVWAv~~l~-e-~~~vTgsaDKtIklWk~--~~~l~tf~gH------tD~VRgL~vl~~~-~flScsNDg~Ir~w~ 206 (745)
T KOG0301|consen 138 GHTASVWAVASLP-E-NTYVTGSADKTIKLWKG--GTLLKTFSGH------TDCVRGLAVLDDS-HFLSCSNDGSIRLWD 206 (745)
T ss_pred CcchheeeeeecC-C-CcEEeccCcceeeeccC--Cchhhhhccc------hhheeeeEEecCC-CeEeecCCceEEEEe
Confidence 4888999999988 4 48999999999999985 7788999999 6789999988765 577888999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+ +|+.+..+.+|...+.+++...++..+++++.|
T Consensus 207 ~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gED 240 (745)
T KOG0301|consen 207 L-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGED 240 (745)
T ss_pred c-cCceeeeeeccceEEEEEEecCCCCeEEEecCC
Confidence 8 699999999999999999988888899998876
No 146
>KOG0641|consensus
Probab=99.53 E-value=9.2e-13 Score=74.07 Aligned_cols=105 Identities=19% Similarity=0.340 Sum_probs=89.8
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
.+.|.+++..| .+.+|++|..|....+||+..++.+..+..| ...|.++.|+|.-.++.+++-|..|++-|++
T Consensus 231 ssavaav~vdp-sgrll~sg~~dssc~lydirg~r~iq~f~ph------sadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 231 SSAVAAVAVDP-SGRLLASGHADSSCMLYDIRGGRMIQRFHPH------SADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred cceeEEEEECC-CcceeeeccCCCceEEEEeeCCceeeeeCCC------ccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 46788999999 8899999999999999999999999999998 7789999999999999999999999999987
Q ss_pred CCeE-----EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 84 SGKL-----VHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 ~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|.+ +.....|...+..+.|+|+.--+++.+.|
T Consensus 304 -gdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssad 340 (350)
T KOG0641|consen 304 -GDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSAD 340 (350)
T ss_pred -cchhhcCceEEEEeccCceEEEEecCccceeeeccCc
Confidence 322 22334678888889999987777776654
No 147
>KOG0290|consensus
Probab=99.52 E-value=6.1e-13 Score=76.85 Aligned_cols=108 Identities=19% Similarity=0.248 Sum_probs=85.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce---eEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP---VVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~ 78 (116)
+..+++++.|+.-+.+++.+++-|-+..|||++++.. ...+..| ...|..++|...+. .+++.+.||.++
T Consensus 149 ~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAH------DKEV~DIaf~~~s~~~FASvgaDGSvR 222 (364)
T KOG0290|consen 149 FCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAH------DKEVYDIAFLKGSRDVFASVGADGSVR 222 (364)
T ss_pred cCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEec------CcceeEEEeccCccceEEEecCCCcEE
Confidence 4567899999877889999999999999999998633 3445566 57899999998654 788999999999
Q ss_pred EEECCCC------------------------------------------------eEEEEeecccccEEEEEECCC-CcE
Q psy17133 79 FFDNVSG------------------------------------------------KLVHSMVAHLDAVTSLAVDPQ-GLY 109 (116)
Q Consensus 79 ~~~~~~~------------------------------------------------~~~~~~~~~~~~v~~~~~~~~-~~~ 109 (116)
+||++.. ..+..+..|.+.|..++|.|. ...
T Consensus 223 mFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~h 302 (364)
T KOG0290|consen 223 MFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSH 302 (364)
T ss_pred EEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCce
Confidence 9998752 123345578888999999985 457
Q ss_pred EEeeecC
Q psy17133 110 ILSGTYQ 116 (116)
Q Consensus 110 l~~~s~d 116 (116)
|+|++.|
T Consensus 303 ictaGDD 309 (364)
T KOG0290|consen 303 ICTAGDD 309 (364)
T ss_pred eeecCCc
Confidence 7787765
No 148
>KOG0268|consensus
Probab=99.52 E-value=2.7e-14 Score=84.31 Aligned_cols=104 Identities=18% Similarity=0.232 Sum_probs=86.9
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
....++|+| +.-.++++++|..++.||+... .++....+| .+.+.+++|+|.|+.+++|+-|.+|+||....
T Consensus 231 RTN~IswnP-eafnF~~a~ED~nlY~~DmR~l~~p~~v~~dh------vsAV~dVdfsptG~EfvsgsyDksIRIf~~~~ 303 (433)
T KOG0268|consen 231 RTNTICWNP-EAFNFVAANEDHNLYTYDMRNLSRPLNVHKDH------VSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNH 303 (433)
T ss_pred cccceecCc-cccceeeccccccceehhhhhhcccchhhccc------ceeEEEeccCCCcchhccccccceEEEeecCC
Confidence 346789999 8888899999999999999753 467777777 67899999999999999999999999999987
Q ss_pred CeEEEEeecc-cccEEEEEECCCCcEEEeeecC
Q psy17133 85 GKLVHSMVAH-LDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 85 ~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.....+... =+.|.++.|+-|.+++++||.|
T Consensus 304 ~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd 336 (433)
T KOG0268|consen 304 GHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDD 336 (433)
T ss_pred CcchhhhhHhhhheeeEEEEeccccEEEecCCC
Confidence 7665444311 2468999999999999999986
No 149
>KOG1332|consensus
Probab=99.52 E-value=1.3e-13 Score=77.89 Aligned_cols=105 Identities=14% Similarity=0.250 Sum_probs=82.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRF 79 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~ 79 (116)
..|-++...- -+.+|++++.|+.|+|+..+.+ +.+.++.+| ++++..++|.. -|.+|++++-|+.|.|
T Consensus 12 D~IHda~lDy-ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh------~GPVwqv~wahPk~G~iLAScsYDgkVIi 84 (299)
T KOG1332|consen 12 DMIHDAQLDY-YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGH------SGPVWKVAWAHPKFGTILASCSYDGKVII 84 (299)
T ss_pred hhhhHhhhhh-hcceeeeecCCccEEEEEEcCCCCceeeeEecCC------CCCeeEEeecccccCcEeeEeecCceEEE
Confidence 3344444443 4689999999999999999754 457788899 78999999974 5999999999999999
Q ss_pred EECCCCeEEE--EeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 80 FDNVSGKLVH--SMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~--~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
|.-++++-.+ ....|...|++++|.|. |-.|+.++.|
T Consensus 85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSD 125 (299)
T KOG1332|consen 85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSD 125 (299)
T ss_pred EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCC
Confidence 9988885433 34578889999999986 5577777765
No 150
>KOG1274|consensus
Probab=99.52 E-value=6.7e-13 Score=85.82 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=88.6
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+-++.+++|+. +|++++.|++|-.|++.+..+......+++| .++|.++.++|++.++|+.+-||.|++|+++
T Consensus 96 tlp~r~~~v~g-~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh------~apVl~l~~~p~~~fLAvss~dG~v~iw~~~ 168 (933)
T KOG1274|consen 96 TLPIRDLAVSG-SGKMIAAGSDDTAVKLLNLDDSSQEKVLRGH------DAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ 168 (933)
T ss_pred eccceEEEEec-CCcEEEeecCceeEEEEeccccchheeeccc------CCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence 45678899998 8899999999999999999999999999999 7799999999999999999999999999999
Q ss_pred CCeEEEEeecc--------cccEEEEEECCCCcEEEeee
Q psy17133 84 SGKLVHSMVAH--------LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 84 ~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~s 114 (116)
++.+...+..- ...+..++|+|++..|+..+
T Consensus 169 ~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~ 207 (933)
T KOG1274|consen 169 DGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPP 207 (933)
T ss_pred cchhhhhcccCCccccccccceeeeeeecCCCCeEEeec
Confidence 98877665421 23567889999966665443
No 151
>KOG4283|consensus
Probab=99.51 E-value=2.4e-13 Score=78.78 Aligned_cols=108 Identities=19% Similarity=0.192 Sum_probs=85.3
Q ss_pred CCCCceEEEEccCCC--cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDES--TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~--~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~ 79 (116)
.++.|+.-+++|-.. -++++|..+.+|++-|+.+|.....+.+| ...|.++.|+|... .+++++.|+.|++
T Consensus 142 me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGH------r~~vlaV~Wsp~~e~vLatgsaDg~irl 215 (397)
T KOG4283|consen 142 MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGH------RDGVLAVEWSPSSEWVLATGSADGAIRL 215 (397)
T ss_pred cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccc------cCceEEEEeccCceeEEEecCCCceEEE
Confidence 356677777777432 25677788999999999999999999999 67899999999866 6688999999999
Q ss_pred EECCCC-eEEEE--------------eecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSG-KLVHS--------------MVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~-~~~~~--------------~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||++.. .+... -..|.+.+..++|+.++.++++.+.|
T Consensus 216 WDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd 267 (397)
T KOG4283|consen 216 WDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTD 267 (397)
T ss_pred EEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCc
Confidence 998743 12221 22467789999999999999887654
No 152
>KOG0288|consensus
Probab=99.51 E-value=1.1e-14 Score=86.96 Aligned_cols=108 Identities=21% Similarity=0.314 Sum_probs=95.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
+|.+.+..+.|-+ +...|++++.|..|++|+....+ ....+.+. .+.++.+.+.++++.+++++.|+.+++
T Consensus 173 ~h~gev~~v~~l~-~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs------~g~it~~d~d~~~~~~iAas~d~~~r~ 245 (459)
T KOG0288|consen 173 AHEGEVHDVEFLR-NSDTLATGGSDRIIKLWNVLGEKSELISTLAGS------LGNITSIDFDSDNKHVIAASNDKNLRL 245 (459)
T ss_pred ccccccceeEEcc-Ccchhhhcchhhhhhhhhcccchhhhhhhhhcc------CCCcceeeecCCCceEEeecCCCceee
Confidence 4788999999998 78999999999999999998655 45566666 578999999999999999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++...+...++.+|...|+++.|......+++|+.|
T Consensus 246 Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~D 282 (459)
T KOG0288|consen 246 WNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSAD 282 (459)
T ss_pred eeccchhhhhhhcccccceeeehhhccccceeecccc
Confidence 9999999999999999999999998776668888765
No 153
>KOG1524|consensus
Probab=99.51 E-value=2.1e-13 Score=84.34 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=79.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC---------ceeEEEe--cCCc-----------------------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG---------KPVVRID--SSQF----------------------- 48 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~---------~~~~~~~--~~~~----------------------- 48 (116)
|.+.+.+-.|+| +|.-|+++++||.|++|.-..+ +.+.... ....
T Consensus 103 H~~A~~~gRW~~-dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~ 181 (737)
T KOG1524|consen 103 HAAAISSGRWSP-DGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIR 181 (737)
T ss_pred hhhhhhhcccCC-CCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeE
Confidence 667888889999 8899999999999999985421 1111110 0000
Q ss_pred CcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 49 GVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
...|.+-|.++.|++...+++++++|...++||-. |..+..-..|..++++++|+|+ +.++.+|
T Consensus 182 WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~S 245 (737)
T KOG1524|consen 182 WRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLWS 245 (737)
T ss_pred EeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc-cceeeee
Confidence 01567889999999999999999999999999965 6666666667777777777777 4444444
No 154
>KOG1036|consensus
Probab=99.51 E-value=5.6e-13 Score=77.15 Aligned_cols=108 Identities=11% Similarity=0.133 Sum_probs=88.8
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCC---CCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSG---GGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.+.++++.| ++.-.+.++-+|.|.+=.+++. +....|++|...... -.+|++++|+|--..+++|+.||.|.
T Consensus 179 qtR~v~~~p-n~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~ 257 (323)
T KOG1036|consen 179 QTRCVALVP-NGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVN 257 (323)
T ss_pred EEEEEEEec-CCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEE
Confidence 367899999 7788888899999998766644 455677877542111 13688999999988999999999999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+||+.+.+.+.++......|..++|+.+|..||+++
T Consensus 258 ~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 258 IWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred EccCcchhhhhhccCCCCceEEEEeccCCCeEEEEe
Confidence 999999999999887777899999999999999876
No 155
>KOG2111|consensus
Probab=99.50 E-value=4.5e-12 Score=73.90 Aligned_cols=87 Identities=22% Similarity=0.336 Sum_probs=73.7
Q ss_pred eeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe-EEEEECCCCeEEEEeec--cccc
Q psy17133 23 AFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH-IRFFDNVSGKLVHSMVA--HLDA 97 (116)
Q Consensus 23 ~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-i~~~~~~~~~~~~~~~~--~~~~ 97 (116)
|...|+|++-|+...+. ...++.| .+.|.+++++.+|..+|+++..|+ |+|||.++|+.++.++. ....
T Consensus 155 g~k~GqvQi~dL~~~~~~~p~~I~AH------~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~ 228 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPNAPSIINAH------DSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRAD 228 (346)
T ss_pred CCccceEEEEEhhhcCcCCceEEEcc------cCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchhe
Confidence 34678999999875443 4667778 679999999999999999999886 89999999999998873 3457
Q ss_pred EEEEEECCCCcEEEeeec
Q psy17133 98 VTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 98 v~~~~~~~~~~~l~~~s~ 115 (116)
+.+++|+|+..+|+.+|.
T Consensus 229 iy~iaFSp~~s~LavsSd 246 (346)
T KOG2111|consen 229 IYCIAFSPNSSWLAVSSD 246 (346)
T ss_pred EEEEEeCCCccEEEEEcC
Confidence 999999999999998774
No 156
>KOG0644|consensus
Probab=99.49 E-value=1.1e-14 Score=93.59 Aligned_cols=98 Identities=20% Similarity=0.293 Sum_probs=92.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|+|..|.. .+.+++++++|..++||...++..+..+.+| .+.++.++.+.+...+++++.|..|++|.
T Consensus 188 gH~naVyca~fDr-tg~~Iitgsdd~lvKiwS~et~~~lAs~rGh------s~ditdlavs~~n~~iaaaS~D~vIrvWr 260 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDR-TGRYIITGSDDRLVKIWSMETARCLASCRGH------SGDITDLAVSSNNTMIAAASNDKVIRVWR 260 (1113)
T ss_pred hhhhheeeeeecc-ccceEeecCccceeeeeeccchhhhccCCCC------ccccchhccchhhhhhhhcccCceEEEEe
Confidence 4667899999998 8999999999999999999999999999999 78999999999888999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQ 106 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~ 106 (116)
+..+.++..+.+|.+.|++++|+|-
T Consensus 261 l~~~~pvsvLrghtgavtaiafsP~ 285 (1113)
T KOG0644|consen 261 LPDGAPVSVLRGHTGAVTAIAFSPR 285 (1113)
T ss_pred cCCCchHHHHhccccceeeeccCcc
Confidence 9999999999999999999999985
No 157
>KOG2096|consensus
Probab=99.49 E-value=1.3e-12 Score=76.53 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=84.4
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC--
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV-- 83 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~-- 83 (116)
.+.++.... ++.+|.+++.+..|.+|++. |+.+..+... ...-...+++|+|+++++++..-.+++|++-
T Consensus 189 ~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~idtn------q~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~ 260 (420)
T KOG2096|consen 189 DIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSIDTN------QSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFT 260 (420)
T ss_pred ceEEEeecC-CceEEEEecCCCcEEEEecC-Cceeeeeccc------cccccceeeCCCCcEEEEecCCCCceEEEEEec
Confidence 344455444 77899999999999999998 8888888776 4456778899999999999999999999863
Q ss_pred -CC-----eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 84 -SG-----KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 -~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.| .....+.+|...|..++|+++...++|.|.|
T Consensus 261 kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkD 299 (420)
T KOG2096|consen 261 KDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKD 299 (420)
T ss_pred cCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecC
Confidence 22 2344577999999999999999999999886
No 158
>KOG0274|consensus
Probab=99.49 E-value=3.4e-13 Score=85.15 Aligned_cols=102 Identities=17% Similarity=0.284 Sum_probs=87.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.++|.++... +..+++|+.|+.|.+|+..+++.+..+.+| ...|.++.+.+. ..+++++.|+.|++||+
T Consensus 330 h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH------~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl 399 (537)
T KOG0274|consen 330 HTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH------TGRVYSLIVDSE-NRLLSGSLDTTIKVWDL 399 (537)
T ss_pred ccccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCC------cceEEEEEecCc-ceEEeeeeccceEeecC
Confidence 78899999886 489999999999999999999999999999 788999977665 88999999999999999
Q ss_pred CCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+. +++..+.+|..-+..+ ...+++|++++.|
T Consensus 400 ~~~~~c~~tl~~h~~~v~~l--~~~~~~Lvs~~aD 432 (537)
T KOG0274|consen 400 RTKRKCIHTLQGHTSLVSSL--LLRDNFLVSSSAD 432 (537)
T ss_pred CchhhhhhhhcCCccccccc--ccccceeEecccc
Confidence 999 8888898888777555 3456677777654
No 159
>KOG2048|consensus
Probab=99.49 E-value=7.2e-12 Score=78.97 Aligned_cols=106 Identities=22% Similarity=0.284 Sum_probs=92.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
..+.|.+++|++ +..|.+.+.++.|..||+.++++...+... .+.|.+++.+|.+..++.+++||.+..++.
T Consensus 68 ~drsIE~L~W~e--~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~------gg~IWsiai~p~~~~l~IgcddGvl~~~s~ 139 (691)
T KOG2048|consen 68 EDRSIESLAWAE--GGRLFSSGLSGSITEWDLHTLKQKYNIDSN------GGAIWSIAINPENTILAIGCDDGVLYDFSI 139 (691)
T ss_pred CCCceeeEEEcc--CCeEEeecCCceEEEEecccCceeEEecCC------CcceeEEEeCCccceEEeecCCceEEEEec
Confidence 457799999995 478888889999999999999999888877 678999999999999999999998888888
Q ss_pred CCCeEEEE--eecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHS--MVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
..++.... +....+++.+++|+|++..+++||.|
T Consensus 140 ~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~D 175 (691)
T KOG2048|consen 140 GPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSID 175 (691)
T ss_pred CCceEEEEeecccccceEEEEEecCCccEEEecccC
Confidence 88776544 33456899999999999999999876
No 160
>KOG2139|consensus
Probab=99.48 E-value=3.9e-12 Score=75.50 Aligned_cols=102 Identities=21% Similarity=0.289 Sum_probs=77.3
Q ss_pred CCCceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
+-+|+.+.|.+ ++..+++++ .+..+.+||..++..+....-. .+.+.-+.|+||+.+++++.-|+..++|+.
T Consensus 195 h~pVtsmqwn~-dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~g------lgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 195 HNPVTSMQWNE-DGTILVTASFGSSSIMIWDPDTGQKIPLIPKG------LGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred CceeeEEEEcC-CCCEEeecccCcceEEEEcCCCCCcccccccC------CCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 35789999999 678787776 6788999999987755444222 357889999999999999999999999964
Q ss_pred CCC-eEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 83 VSG-KLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 83 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
... ...+- ....+.|+..+|+|+|++|+-+
T Consensus 268 ~q~wt~erw-~lgsgrvqtacWspcGsfLLf~ 298 (445)
T KOG2139|consen 268 NQSWTKERW-ILGSGRVQTACWSPCGSFLLFA 298 (445)
T ss_pred cccceecce-eccCCceeeeeecCCCCEEEEE
Confidence 332 22222 2234589999999999987643
No 161
>KOG0771|consensus
Probab=99.48 E-value=6.6e-13 Score=79.37 Aligned_cols=70 Identities=10% Similarity=0.164 Sum_probs=62.3
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 85 (116)
..++|++ ++..+++++.|+.+++|+......+.....| ...|.++.|+||++++++.+.| ..++|+..++
T Consensus 148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~------~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g 217 (398)
T KOG0771|consen 148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTILEEIAH------HAEVKDLDFSPDGKFLASIGAD-SARVWSVNTG 217 (398)
T ss_pred eEEEEcC-CCCEeeeccccceEEEEecCcchhhhhhHhh------cCccccceeCCCCcEEEEecCC-ceEEEEeccC
Confidence 6788998 8899999999999999998877777776666 5789999999999999999999 9999998876
No 162
>KOG0301|consensus
Probab=99.48 E-value=4.7e-12 Score=80.06 Aligned_cols=102 Identities=13% Similarity=0.232 Sum_probs=87.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|+..|..+++-+ + ..+++++.|+.|++|++ +++.+.++.+| ++.+.++...+++..++++++|+++++|+
T Consensus 177 gHtD~VRgL~vl~-~-~~flScsNDg~Ir~w~~-~ge~l~~~~gh------tn~vYsis~~~~~~~Ivs~gEDrtlriW~ 247 (745)
T KOG0301|consen 177 GHTDCVRGLAVLD-D-SHFLSCSNDGSIRLWDL-DGEVLLEMHGH------TNFVYSISMALSDGLIVSTGEDRTLRIWK 247 (745)
T ss_pred cchhheeeeEEec-C-CCeEeecCCceEEEEec-cCceeeeeecc------ceEEEEEEecCCCCeEEEecCCceEEEee
Confidence 3788999999987 3 67888999999999999 68899999999 77899999888889999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.. ++.+.+......++++.+-++|..++.+|
T Consensus 248 ~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~S 278 (745)
T KOG0301|consen 248 KD--ECVQVITLPTTSIWSAKVLLNGDIVVGGS 278 (745)
T ss_pred cC--ceEEEEecCccceEEEEEeeCCCEEEecc
Confidence 76 77777775555889998888888776554
No 163
>KOG4328|consensus
Probab=99.47 E-value=2.5e-13 Score=82.16 Aligned_cols=115 Identities=17% Similarity=0.173 Sum_probs=84.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee--EEE---------------------ecCCc----------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV--VRI---------------------DSSQF---------- 48 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~--~~~---------------------~~~~~---------- 48 (116)
+|.++|.++.|+|.+..++++.+.||.+++-|++.+... ... -.+..
T Consensus 232 ~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~ 311 (498)
T KOG4328|consen 232 PHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTD 311 (498)
T ss_pred cCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecC
Confidence 578899999999988889999999999999998743211 000 00000
Q ss_pred ------CcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECCCCeE----EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 49 ------GVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNVSGKL----VHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 49 ------~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
..-|...|..++++|..+ ++++++.|++++|||++.-.. +-....|...|.+..|+|++-.|+|.+.|
T Consensus 312 ~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D 390 (498)
T KOG4328|consen 312 GSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQD 390 (498)
T ss_pred CccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccC
Confidence 003445789999999754 789999999999999874321 22233588899999999987778888765
No 164
>KOG0307|consensus
Probab=99.47 E-value=1.4e-13 Score=90.28 Aligned_cols=111 Identities=13% Similarity=0.121 Sum_probs=85.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~ 80 (116)
.|+|.|..++|++..++.+++|+.+|+|.|||+..-+.-..+.... ....|.+++|+.. ..++++++.++++.||
T Consensus 114 ~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~----~~~eI~~lsWNrkvqhILAS~s~sg~~~iW 189 (1049)
T KOG0307|consen 114 KHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQA----PPSEIKCLSWNRKVSHILASGSPSGRAVIW 189 (1049)
T ss_pred ccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCC----CcccceEeccchhhhHHhhccCCCCCceec
Confidence 4899999999999777899999999999999998644433332221 1567999999976 5688999999999999
Q ss_pred ECCCCeEEEEeeccc--ccEEEEEECCCCc-EEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHL--DAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~--~~v~~~~~~~~~~-~l~~~s~d 116 (116)
|++..+.+-.+..+. ..+..++|+|+.- .+++++.|
T Consensus 190 Dlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~d 228 (1049)
T KOG0307|consen 190 DLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGD 228 (1049)
T ss_pred cccCCCcccccccCCCccceeeeeeCCCCceeeeeecCC
Confidence 999877666555333 3578999999754 55566554
No 165
>KOG2106|consensus
Probab=99.47 E-value=5.1e-12 Score=77.71 Aligned_cols=102 Identities=11% Similarity=0.104 Sum_probs=84.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|......++..| ..+++++++.|+.+++|+ +.+++...... .+..+++|+|.| .++.+...|...+.|.
T Consensus 367 h~delwgla~hp-s~~q~~T~gqdk~v~lW~--~~k~~wt~~~~-------d~~~~~~fhpsg-~va~Gt~~G~w~V~d~ 435 (626)
T KOG2106|consen 367 HGDELWGLATHP-SKNQLLTCGQDKHVRLWN--DHKLEWTKIIE-------DPAECADFHPSG-VVAVGTATGRWFVLDT 435 (626)
T ss_pred cccceeeEEcCC-ChhheeeccCcceEEEcc--CCceeEEEEec-------CceeEeeccCcc-eEEEeeccceEEEEec
Confidence 556678888999 779999999999999999 45555444433 368899999999 9999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++...+..-. ...+++.++|+|+|.+||.|+.|
T Consensus 436 e~~~lv~~~~-d~~~ls~v~ysp~G~~lAvgs~d 468 (626)
T KOG2106|consen 436 ETQDLVTIHT-DNEQLSVVRYSPDGAFLAVGSHD 468 (626)
T ss_pred ccceeEEEEe-cCCceEEEEEcCCCCEEEEecCC
Confidence 9855555444 37789999999999999999986
No 166
>KOG0270|consensus
Probab=99.47 E-value=3.1e-13 Score=81.39 Aligned_cols=112 Identities=17% Similarity=0.294 Sum_probs=82.0
Q ss_pred CCceEEEEccC------CCcEEEEeeCCCeEEEEECCCCcee---EEEe----------cC--CcCcCCCCceeEEEEcC
Q psy17133 5 GTPTSIDFVRD------ESTKMVTAFDNSACVLFDLETGKPV---VRID----------SS--QFGVSGGGGINRVVCHP 63 (116)
Q Consensus 5 ~~v~~~~~~~~------~~~~l~~~~~~~~v~i~~~~~~~~~---~~~~----------~~--~~~~~~~~~i~~~~~~~ 63 (116)
..+.|+.|... .+++++.|..+..|.|||+.-...+ ..+. +. ....+|+..+.++.|+.
T Consensus 174 afPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~ 253 (463)
T KOG0270|consen 174 AFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNR 253 (463)
T ss_pred CcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcc
Confidence 34456666421 3679999999999999998622111 1111 00 00113455677888887
Q ss_pred C-CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 64 T-LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 64 ~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
. ...|++++.|.+|++||+.++++..++..|...|+++.|+| ...+|++||.|
T Consensus 254 ~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D 308 (463)
T KOG0270|consen 254 NFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYD 308 (463)
T ss_pred ccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEecccc
Confidence 6 45899999999999999999999999998999999999998 56788898865
No 167
>KOG2111|consensus
Probab=99.46 E-value=3.8e-11 Score=70.14 Aligned_cols=78 Identities=14% Similarity=0.165 Sum_probs=69.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCe-EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSA-CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
-|.+.|.+++.+. +|.++++++..|+ |+|||..+|..+.++.-... ...+.+++|+|+..+++.+++.|++.++
T Consensus 179 AH~s~Iacv~Ln~-~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d----~A~iy~iaFSp~~s~LavsSdKgTlHiF 253 (346)
T KOG2111|consen 179 AHDSDIACVALNL-QGTLVATASTKGTLIRIFDTEDGTLLQELRRGVD----RADIYCIAFSPNSSWLAVSSDKGTLHIF 253 (346)
T ss_pred cccCceeEEEEcC-CccEEEEeccCcEEEEEEEcCCCcEeeeeecCCc----hheEEEEEeCCCccEEEEEcCCCeEEEE
Confidence 4889999999998 8999999998887 78999999999999864433 5679999999999999999999999999
Q ss_pred ECCC
Q psy17133 81 DNVS 84 (116)
Q Consensus 81 ~~~~ 84 (116)
.++.
T Consensus 254 ~l~~ 257 (346)
T KOG2111|consen 254 SLRD 257 (346)
T ss_pred Eeec
Confidence 8764
No 168
>KOG4227|consensus
Probab=99.44 E-value=4.7e-12 Score=76.16 Aligned_cols=109 Identities=9% Similarity=0.065 Sum_probs=89.9
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC------CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET------GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR 75 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 75 (116)
.|.|.|.++.|+. ++++|++|+.|..+++|.+.. .+++.....+ |.+.|.+++|.....++++|..++
T Consensus 54 ~H~GCiNAlqFS~-N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~-----H~SNIF~L~F~~~N~~~~SG~~~~ 127 (609)
T KOG4227|consen 54 EHTGCINALQFSH-NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHP-----HRSNIFSLEFDLENRFLYSGERWG 127 (609)
T ss_pred hhccccceeeecc-CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCc-----cccceEEEEEccCCeeEecCCCcc
Confidence 4789999999998 789999999999999999862 2444444332 357899999999999999999999
Q ss_pred eEEEEECCCCeEEEEeecc--cccEEEEEECCCCcEEEeeecC
Q psy17133 76 HIRFFDNVSGKLVHSMVAH--LDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|.+.|+++.+.+..+... .+.|+.+.-+|..+.|++.+.+
T Consensus 128 ~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~ 170 (609)
T KOG4227|consen 128 TVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRA 170 (609)
T ss_pred eeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecC
Confidence 9999999999988877632 3489999999998888877653
No 169
>KOG2055|consensus
Probab=99.43 E-value=7.9e-12 Score=75.99 Aligned_cols=102 Identities=14% Similarity=0.184 Sum_probs=87.5
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 85 (116)
.+.....+| ++++|+..+.+|.|++....+++.+..++.. +.+..++|+.+++.++..+.+|.|.+||+.+.
T Consensus 305 ~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~s~Kie-------G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~ 376 (514)
T KOG2055|consen 305 SMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELITSFKIE-------GVVSDFTFSSDSKELLASGGTGEVYVWNLRQN 376 (514)
T ss_pred hhheeEecC-CCCeEEEcccCceEEeehhhhhhhhheeeec-------cEEeeEEEecCCcEEEEEcCCceEEEEecCCc
Confidence 455677788 7899999999999999999999999988866 67999999999999999999999999999999
Q ss_pred eEEEEeecccc-cEEEEEECCCCcEEEeeec
Q psy17133 86 KLVHSMVAHLD-AVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 86 ~~~~~~~~~~~-~v~~~~~~~~~~~l~~~s~ 115 (116)
.+++.+....+ .-+.+|.++++++||+||.
T Consensus 377 ~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~ 407 (514)
T KOG2055|consen 377 SCLHRFVDDGSVHGTSLCISLNGSYLATGSD 407 (514)
T ss_pred ceEEEEeecCccceeeeeecCCCceEEeccC
Confidence 88888763222 3467888899999999985
No 170
>KOG0650|consensus
Probab=99.43 E-value=1.7e-11 Score=76.82 Aligned_cols=105 Identities=16% Similarity=0.220 Sum_probs=80.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~ 79 (116)
.|.+.|.+++..| .|.+|++|+.||.|++|.+.++..+..+... +.|.+++|+|.+. +++.+..+. +.+
T Consensus 398 GHtg~Vr~iSvdp-~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-------~~I~~vaw~P~~~~~vLAvA~~~~-~~i 468 (733)
T KOG0650|consen 398 GHTGLVRSISVDP-SGEWLASGSDDGTVRIWEIATGRCVRTVQFD-------SEIRSVAWNPLSDLCVLAVAVGEC-VLI 468 (733)
T ss_pred ccCCeEEEEEecC-CcceeeecCCCCcEEEEEeecceEEEEEeec-------ceeEEEEecCCCCceeEEEEecCc-eEE
Confidence 5899999999999 8999999999999999999999999988766 5799999999754 555554443 444
Q ss_pred EECCCC-------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 80 FDNVSG-------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 80 ~~~~~~-------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.+..-| .-++....|...|..+.|+..|.||++..-
T Consensus 469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~ 541 (733)
T KOG0650|consen 469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMP 541 (733)
T ss_pred eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEecc
Confidence 432211 001222245678999999999999998653
No 171
>KOG2445|consensus
Probab=99.41 E-value=4.4e-11 Score=69.74 Aligned_cols=107 Identities=17% Similarity=0.235 Sum_probs=82.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcC-C-CCEEEEEeCCCe
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHP-T-LPLTITAHDDRH 76 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~d~~ 76 (116)
|..-|.++.|.+ .|+.+++++.|.++.|||..+. ......+.| .+.|..+.|.+ . |+.+++++.|++
T Consensus 12 h~DlihdVs~D~-~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah------~~Si~rV~WAhPEfGqvvA~cS~Drt 84 (361)
T KOG2445|consen 12 HKDLIHDVSFDF-YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAH------DGSIWRVVWAHPEFGQVVATCSYDRT 84 (361)
T ss_pred Ccceeeeeeecc-cCceeeeccCCCcEEEEeccCCCCceEEeeeEEec------CCcEEEEEecCccccceEEEEecCCc
Confidence 456689999999 8899999999999999996532 345566777 67899999874 4 899999999999
Q ss_pred EEEEECCCC-------e--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 77 IRFFDNVSG-------K--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~-------~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
+.||+-+.. + ...++......|++++|.|. |-.|++++.|
T Consensus 85 v~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aD 135 (361)
T KOG2445|consen 85 VSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASAD 135 (361)
T ss_pred eeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccC
Confidence 999975211 1 22344456678999999994 6677877765
No 172
>KOG0300|consensus
Probab=99.41 E-value=3e-12 Score=75.16 Aligned_cols=66 Identities=15% Similarity=0.195 Sum_probs=55.6
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|.+.+.+..|-..++.++++++|.+..+||+++++.+..+.+|....+.++-+|..+.+++.+.|
T Consensus 270 gH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrD 335 (481)
T KOG0300|consen 270 GHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRD 335 (481)
T ss_pred ccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccC
Confidence 445556666666677788888888888899999999999999999999999999999999998876
No 173
>KOG0321|consensus
Probab=99.41 E-value=2.1e-12 Score=81.00 Aligned_cols=77 Identities=18% Similarity=0.207 Sum_probs=67.6
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE--EecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR--IDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHI 77 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i 77 (116)
|.|-..|..+.|.| ....|++++.|.+++.||+++.+.+.. +.+| .+.+.+++|+|..+ .+++|+.||.+
T Consensus 97 ~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH------~~SvkS~cf~~~n~~vF~tGgRDg~i 169 (720)
T KOG0321|consen 97 LAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGRLNLGH------TGSVKSECFMPTNPAVFCTGGRDGEI 169 (720)
T ss_pred ccccceeEeeccCC-CceeEEEccCCceeeeeeeccceeecceeeccc------ccccchhhhccCCCcceeeccCCCcE
Confidence 46888999999999 778999999999999999998877665 7777 67899999999765 78889999999
Q ss_pred EEEECCC
Q psy17133 78 RFFDNVS 84 (116)
Q Consensus 78 ~~~~~~~ 84 (116)
.|||++.
T Consensus 170 llWD~R~ 176 (720)
T KOG0321|consen 170 LLWDCRC 176 (720)
T ss_pred EEEEEec
Confidence 9999863
No 174
>KOG0290|consensus
Probab=99.40 E-value=2.6e-11 Score=70.29 Aligned_cols=112 Identities=14% Similarity=0.138 Sum_probs=81.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-------------eEEEecCCcC-------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-------------VVRIDSSQFG------------------- 49 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-------------~~~~~~~~~~------------------- 49 (116)
.|.+.|..++|.....+.+++.+.||.+++||++..+. +.++......
T Consensus 194 AHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDi 273 (364)
T KOG0290|consen 194 AHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDI 273 (364)
T ss_pred ecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEe
Confidence 58899999999985557888899999999999874321 1122111110
Q ss_pred ----------cCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECCCCeE------EEEeecccccEEEEEECC-CCcEEE
Q psy17133 50 ----------VSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNVSGKL------VHSMVAHLDAVTSLAVDP-QGLYIL 111 (116)
Q Consensus 50 ----------~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~------~~~~~~~~~~v~~~~~~~-~~~~l~ 111 (116)
.+|.+.|+.++|.|. ...++++++|..+.+||+.+.-. +-.+ ...+.|..+.|++ .+.+++
T Consensus 274 R~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay-~a~~EVNqi~Ws~~~~Dwia 352 (364)
T KOG0290|consen 274 RVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAY-TAGGEVNQIQWSSSQPDWIA 352 (364)
T ss_pred cCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhh-hccceeeeeeecccCCCEEE
Confidence 078899999999997 56999999999999999975322 1112 2467899999996 566777
Q ss_pred eee
Q psy17133 112 SGT 114 (116)
Q Consensus 112 ~~s 114 (116)
.+.
T Consensus 353 i~~ 355 (364)
T KOG0290|consen 353 ICF 355 (364)
T ss_pred EEe
Confidence 654
No 175
>KOG3881|consensus
Probab=99.40 E-value=1.4e-11 Score=73.55 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=91.4
Q ss_pred CceEEEEccCC--CcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 6 TPTSIDFVRDE--STKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 6 ~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
.++++.|.+ + ...++++..-+++++||...+ +++..|... ...+.++...|++.+++++...+.+..||+
T Consensus 204 W~tdi~Fl~-g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~------E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~ 276 (412)
T KOG3881|consen 204 WITDIRFLE-GSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFL------ENPISSTGLTPSGNFIYTGNTKGQLAKFDL 276 (412)
T ss_pred eeccceecC-CCCCceEEEEecceeEEEecCcccCcceeEeccc------cCcceeeeecCCCcEEEEecccchhheecc
Confidence 357788887 5 678999999999999999865 467777766 568999999999999999999999999999
Q ss_pred CCCeEEEE-eecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHS-MVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.++.... +.+..+.++++..+|.++++++++.|
T Consensus 277 r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLD 311 (412)
T KOG3881|consen 277 RGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLD 311 (412)
T ss_pred cCceeeccccCCccCCcceEEEcCCCceEEeeccc
Confidence 99988776 77788899999999999999999876
No 176
>KOG4378|consensus
Probab=99.40 E-value=8.4e-12 Score=76.83 Aligned_cols=103 Identities=16% Similarity=0.287 Sum_probs=83.7
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~ 83 (116)
.|.-+.|+|.....|.+++.+|.|.+||+....+...+ +.| ..+...++|+|. ..++++.+.|..|.+||+.
T Consensus 166 svRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~H------sAP~~gicfspsne~l~vsVG~Dkki~~yD~~ 239 (673)
T KOG4378|consen 166 SVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAH------SAPCRGICFSPSNEALLVSVGYDKKINIYDIR 239 (673)
T ss_pred eEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhc------cCCcCcceecCCccceEEEecccceEEEeecc
Confidence 45678999965566778899999999999877777665 455 668899999997 5588899999999999998
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
..+....+. ...+...++|.++|-+|+.|+.
T Consensus 240 s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s 270 (673)
T KOG4378|consen 240 SQASTDRLT-YSHPLSTVAFSECGTYLCAGNS 270 (673)
T ss_pred cccccceee-ecCCcceeeecCCceEEEeecC
Confidence 766665554 4568899999999999988763
No 177
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.40 E-value=5.3e-11 Score=70.25 Aligned_cols=89 Identities=13% Similarity=0.165 Sum_probs=70.7
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNVSGKLVHSMVAHLD 96 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 96 (116)
+.+++++.++.+++||..+++.+..+..+ ..+..++|+|+++.+ +++..++.+++||..+++.+..+..+.
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~-------~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 73 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTRTFPVG-------QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP- 73 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEEEEECC-------CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-
Confidence 56788889999999999988888888765 236779999999866 566778999999999988877665433
Q ss_pred cEEEEEECCCCcEEEeee
Q psy17133 97 AVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 97 ~v~~~~~~~~~~~l~~~s 114 (116)
.+..++|+|+++.+++++
T Consensus 74 ~~~~~~~~~~g~~l~~~~ 91 (300)
T TIGR03866 74 DPELFALHPNGKILYIAN 91 (300)
T ss_pred CccEEEECCCCCEEEEEc
Confidence 356789999999776543
No 178
>KOG4378|consensus
Probab=99.39 E-value=1.5e-11 Score=75.80 Aligned_cols=98 Identities=16% Similarity=0.149 Sum_probs=83.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|..+...++|+|.+...+++.+.|.+|.+||....+....+... .+...++|.++|.+++.|...|.|..||+
T Consensus 207 HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~-------~Plstvaf~~~G~~L~aG~s~G~~i~YD~ 279 (673)
T KOG4378|consen 207 HSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYS-------HPLSTVAFSECGTYLCAGNSKGELIAYDM 279 (673)
T ss_pred ccCCcCcceecCCccceEEEecccceEEEeecccccccceeeec-------CCcceeeecCCceEEEeecCCceEEEEec
Confidence 66778899999977778888899999999999876666666543 57899999999999999999999999999
Q ss_pred CC-CeEEEEeecccccEEEEEECCCC
Q psy17133 83 VS-GKLVHSMVAHLDAVTSLAVDPQG 107 (116)
Q Consensus 83 ~~-~~~~~~~~~~~~~v~~~~~~~~~ 107 (116)
+. ..++..+..|...|++++|-|..
T Consensus 280 R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 280 RSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred ccCCCCceEeeecccceeEEEeeecc
Confidence 84 45677788899999999997764
No 179
>KOG1272|consensus
Probab=99.39 E-value=3.1e-13 Score=82.08 Aligned_cols=106 Identities=20% Similarity=0.278 Sum_probs=95.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...|..+.|.| ..-+|++++..|.+..-|+.+|+.+..+... .+.+..++-+|-.-.+-.|...|+|.+|...
T Consensus 209 ~~~v~rLeFLP-yHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~------~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ 281 (545)
T KOG1272|consen 209 HIRVARLEFLP-YHFLLVAASEAGFLKYQDVSTGKLVASIRTG------AGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN 281 (545)
T ss_pred cCchhhhcccc-hhheeeecccCCceEEEeechhhhhHHHHcc------CCccchhhcCCccceEEEcCCCceEEecCCC
Confidence 46788899999 5566777888999999999999999998877 5778889999999999999999999999999
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
..+.+..+..|.++|+++++.++|++++|++.|
T Consensus 282 skePLvKiLcH~g~V~siAv~~~G~YMaTtG~D 314 (545)
T KOG1272|consen 282 SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLD 314 (545)
T ss_pred CcchHHHHHhcCCCcceEEECCCCcEEeecccc
Confidence 899888888999999999999999999999876
No 180
>KOG2110|consensus
Probab=99.39 E-value=4.1e-11 Score=71.14 Aligned_cols=105 Identities=14% Similarity=0.264 Sum_probs=80.8
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe--CCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH--DDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~d~~i~~~~ 81 (116)
...|.++.++. +.|++.-++ +++|||+.+.+.+.++..... +...+..+..++.+.+++.-+ ..|.|.+||
T Consensus 87 pt~IL~VrmNr---~RLvV~Lee-~IyIydI~~MklLhTI~t~~~---n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d 159 (391)
T KOG2110|consen 87 PTSILAVRMNR---KRLVVCLEE-SIYIYDIKDMKLLHTIETTPP---NPKGLCALSPNNANCYLAYPGSTTSGDVVLFD 159 (391)
T ss_pred CCceEEEEEcc---ceEEEEEcc-cEEEEecccceeehhhhccCC---CccceEeeccCCCCceEEecCCCCCceEEEEE
Confidence 45677777754 566666544 499999999999888765411 033455666666666777643 368999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
..+-+....+..|.+.+-+++|+++|.+|||+|.
T Consensus 160 ~~nl~~v~~I~aH~~~lAalafs~~G~llATASe 193 (391)
T KOG2110|consen 160 TINLQPVNTINAHKGPLAALAFSPDGTLLATASE 193 (391)
T ss_pred cccceeeeEEEecCCceeEEEECCCCCEEEEecc
Confidence 9999999999999999999999999999999985
No 181
>KOG1188|consensus
Probab=99.39 E-value=1.1e-11 Score=72.89 Aligned_cols=109 Identities=17% Similarity=0.275 Sum_probs=79.7
Q ss_pred CCCCceEEEEccC-CCcEEEEeeCCCeEEEEECCCCceeEEE--ecCCcCcCCCCceeEEEEcCCCCEEEEEeC----CC
Q psy17133 3 YNGTPTSIDFVRD-ESTKMVTAFDNSACVLFDLETGKPVVRI--DSSQFGVSGGGGINRVVCHPTLPLTITAHD----DR 75 (116)
Q Consensus 3 ~~~~v~~~~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----d~ 75 (116)
+...+..+.|... .++.+.+++.||.|++||++.......+ ..+. .....+++.+-.+.+++++.+ +-
T Consensus 69 ~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~-----~~~f~~ld~nck~~ii~~GtE~~~s~A 143 (376)
T KOG1188|consen 69 PPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQS-----GTPFICLDLNCKKNIIACGTELTRSDA 143 (376)
T ss_pred CCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCC-----CCcceEeeccCcCCeEEeccccccCce
Confidence 3455667777653 4578889999999999999976655444 3331 235666776667788888764 56
Q ss_pred eEEEEECCCCeE-EEEe-ecccccEEEEEECC-CCcEEEeeecC
Q psy17133 76 HIRFFDNVSGKL-VHSM-VAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 76 ~i~~~~~~~~~~-~~~~-~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
.+.+||++..+. +..+ ..|...|+.++|+| +.+.|++||.|
T Consensus 144 ~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvD 187 (376)
T KOG1188|consen 144 SVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVD 187 (376)
T ss_pred EEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeeccc
Confidence 899999986655 5544 36888999999999 56788999876
No 182
>KOG1408|consensus
Probab=99.38 E-value=2.3e-11 Score=77.93 Aligned_cols=62 Identities=32% Similarity=0.549 Sum_probs=54.5
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec---ccccEEEEEECCCCcEEEeeecC
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA---HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+..+++.|+.+++++++.|..|+||++++++..+.+++ |.+....+...|.|.|+++.+.|
T Consensus 598 TlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsd 662 (1080)
T KOG1408|consen 598 TLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSD 662 (1080)
T ss_pred eEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecC
Confidence 466788899999999999999999999999999999874 55678889999999999987765
No 183
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.38 E-value=3.9e-11 Score=67.32 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=62.1
Q ss_pred CCCCceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------ 73 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------ 73 (116)
+...+..+.|+| +|+++++++ ..|.+.+||..+.+.+..++.. .+..++|+|+|++++++..
T Consensus 99 ~~~~~n~i~wsP-~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~--------~~t~~~WsPdGr~~~ta~t~~r~~~ 169 (194)
T PF08662_consen 99 GTQPRNTISWSP-DGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS--------DATDVEWSPDGRYLATATTSPRLRV 169 (194)
T ss_pred cCCCceEEEECC-CCCEEEEEEccCCCcEEEEEECCCCEEeeccccC--------cEEEEEEcCCCCEEEEEEeccceec
Confidence 456778899999 888888875 3578999999987777666533 4789999999999988764
Q ss_pred CCeEEEEECCCCeEEEEe
Q psy17133 74 DRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~ 91 (116)
|+.++||+.. |+.+...
T Consensus 170 dng~~Iw~~~-G~~l~~~ 186 (194)
T PF08662_consen 170 DNGFKIWSFQ-GRLLYKK 186 (194)
T ss_pred cccEEEEEec-CeEeEec
Confidence 6889999985 6665543
No 184
>KOG2106|consensus
Probab=99.37 E-value=1.1e-10 Score=72.04 Aligned_cols=104 Identities=15% Similarity=0.238 Sum_probs=82.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
..++.++.|+| .+ .++.|+..|...+.|.++.. +..+... ..+++.++++|+|..+|.++.|+.|.+|.+.
T Consensus 407 ~d~~~~~~fhp-sg-~va~Gt~~G~w~V~d~e~~~-lv~~~~d------~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs 477 (626)
T KOG2106|consen 407 EDPAECADFHP-SG-VVAVGTATGRWFVLDTETQD-LVTIHTD------NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVS 477 (626)
T ss_pred cCceeEeeccC-cc-eEEEeeccceEEEEecccce-eEEEEec------CCceEEEEEcCCCCEEEEecCCCeEEEEEEC
Confidence 45678999999 66 99999999999999998744 4444433 3689999999999999999999999999986
Q ss_pred C-CeEEEEe-ecccccEEEEEECCCCcEEEeeecC
Q psy17133 84 S-GKLVHSM-VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 ~-~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
. +...... ..+.+.++.+.|++|+++|.+.+.|
T Consensus 478 ~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d 512 (626)
T KOG2106|consen 478 ANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGD 512 (626)
T ss_pred CCCcEEEEeeeecCceeEEeeecCCCceEEeccCc
Confidence 4 4443332 2344789999999999999987754
No 185
>KOG0642|consensus
Probab=99.37 E-value=7.4e-12 Score=77.51 Aligned_cols=107 Identities=20% Similarity=0.244 Sum_probs=88.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--------CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--------GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 74 (116)
|...+..+.|.| ....+++++.++.+.+|.+.. -+++.+|.+| .++|.++++.+++..+++++-|
T Consensus 293 ~~d~ir~l~~~~-sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH------~gPVl~v~v~~n~~~~ysgg~D 365 (577)
T KOG0642|consen 293 HDDCIRALAFHP-SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAH------EGPVLCVVVPSNGEHCYSGGID 365 (577)
T ss_pred chhhhhhhhcCC-CCCeEEEeccccchhhhhhcccCCccccceeeeEEEecc------cCceEEEEecCCceEEEeeccC
Confidence 456678888988 678899999999999999931 2456788888 7899999999999999999999
Q ss_pred CeEEEEECCC----------CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 75 RHIRFFDNVS----------GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|.|+.|++.. ......+.+|...++.+++++....|++++.|
T Consensus 366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~D 417 (577)
T KOG0642|consen 366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSD 417 (577)
T ss_pred ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCC
Confidence 9999996542 12344567899999999999988889888765
No 186
>KOG4547|consensus
Probab=99.36 E-value=6.1e-11 Score=73.73 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=89.6
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.++.++. +...|.+++.|.++-.|+...++....+.+. ...+.+++++||+..+++++ +.|++|+
T Consensus 100 ~h~~~v~~~~~~~-~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~------~~~~~sl~is~D~~~l~~as--~~ik~~~ 170 (541)
T KOG4547|consen 100 KHYGNVNEILDAQ-RLGCIYSVGADLKVVYILEKEKVIIRIWKEQ------KPLVSSLCISPDGKILLTAS--RQIKVLD 170 (541)
T ss_pred CCCCcceeeeccc-ccCceEecCCceeEEEEecccceeeeeeccC------CCccceEEEcCCCCEEEecc--ceEEEEE
Confidence 3778899998887 7788999999999999999989888888877 56789999999999998885 7899999
Q ss_pred CCCCeEEEEeecccccEEEEEECCC-----CcEEEe
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQ-----GLYILS 112 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~ 112 (116)
+++++.+..+.+|.+.|+.++|.-+ |.++.+
T Consensus 171 ~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLs 206 (541)
T KOG4547|consen 171 IETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLS 206 (541)
T ss_pred ccCceEEEEecCCCcceEEEEEEEeccccccceeee
Confidence 9999999999999999999999765 666654
No 187
>KOG1963|consensus
Probab=99.35 E-value=5.3e-11 Score=76.80 Aligned_cols=106 Identities=6% Similarity=0.010 Sum_probs=85.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--C--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--G--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
|.-.+++.+++| ++++++++..+|+|.+|.-.. . ..-..+..| ...|.++.|+++|.++++|+..+.+.
T Consensus 204 Htf~~t~~~~sp-n~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH------~~~V~~L~fS~~G~~LlSGG~E~VLv 276 (792)
T KOG1963|consen 204 HTFNITCVALSP-NERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWH------HDEVNSLSFSSDGAYLLSGGREGVLV 276 (792)
T ss_pred hcccceeEEecc-ccceEEEeccCCcEEEEeccccccccccceEEEec------ccccceeEEecCCceEeecccceEEE
Confidence 455578999999 889999999999999996442 1 234456667 56899999999999999999999999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|.+.+++ .+-+..-.+.|..+.++||+...+....|
T Consensus 277 ~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~D 313 (792)
T KOG1963|consen 277 LWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLED 313 (792)
T ss_pred EEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecC
Confidence 99999888 33344456789999999999887765544
No 188
>KOG1272|consensus
Probab=99.35 E-value=3.8e-12 Score=77.48 Aligned_cols=99 Identities=16% Similarity=0.241 Sum_probs=81.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+.+..+.-+| -...+-+|..+|.|.+|.....+++..+.+| .+.|.++++.++|.++++.+.|..++|||++.
T Consensus 252 G~~~vm~qNP-~NaVih~GhsnGtVSlWSP~skePLvKiLcH------~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~ 324 (545)
T KOG1272|consen 252 GRTDVMKQNP-YNAVIHLGHSNGTVSLWSPNSKEPLVKILCH------RGPVSSIAVDRGGRYMATTGLDRKVKIWDLRN 324 (545)
T ss_pred CccchhhcCC-ccceEEEcCCCceEEecCCCCcchHHHHHhc------CCCcceEEECCCCcEEeecccccceeEeeecc
Confidence 4556677778 4577888899999999999999999999999 78999999999999999999999999999998
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
-..+.++.. ......+++|..|...+
T Consensus 325 ~~ql~t~~t-p~~a~~ls~SqkglLA~ 350 (545)
T KOG1272|consen 325 FYQLHTYRT-PHPASNLSLSQKGLLAL 350 (545)
T ss_pred ccccceeec-CCCccccccccccceee
Confidence 777766654 34566777776654433
No 189
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.34 E-value=9.1e-11 Score=73.04 Aligned_cols=102 Identities=19% Similarity=0.142 Sum_probs=69.7
Q ss_pred CCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEE-
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIR- 78 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~- 78 (116)
...+....|+| +++.|+..+. +..|++||+.+++.... ... .+....++|+|||+.++.+. .++...
T Consensus 203 ~~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~------~g~~~~~~wSPDG~~La~~~~~~g~~~I 274 (429)
T PRK01742 203 SQPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASF------RGHNGAPAFSPDGSRLAFASSKDGVLNI 274 (429)
T ss_pred CCccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecC------CCccCceeECCCCCEEEEEEecCCcEEE
Confidence 45688999999 7788877653 34799999987754222 211 12344689999999777654 577554
Q ss_pred -EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 -FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 -~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+||+.+++.. .+..+...+....|+|||+.|+.++
T Consensus 275 y~~d~~~~~~~-~lt~~~~~~~~~~wSpDG~~i~f~s 310 (429)
T PRK01742 275 YVMGANGGTPS-QLTSGAGNNTEPSWSPDGQSILFTS 310 (429)
T ss_pred EEEECCCCCeE-eeccCCCCcCCEEECCCCCEEEEEE
Confidence 4566666543 3444555678899999999877554
No 190
>KOG0307|consensus
Probab=99.33 E-value=7e-12 Score=82.66 Aligned_cols=102 Identities=16% Similarity=0.260 Sum_probs=84.9
Q ss_pred ceEEEEccCCCcEEEEeeCC---CeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEE
Q psy17133 7 PTSIDFVRDESTKMVTAFDN---SACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFD 81 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~---~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~ 81 (116)
+..+.|+|++...++++++| ..|.+||++. ..+++.+++| ...|.++.|++.+ .++++++.|+.+.+|+
T Consensus 209 ~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H------~~GilslsWc~~D~~lllSsgkD~~ii~wN 282 (1049)
T KOG0307|consen 209 CSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGH------QRGILSLSWCPQDPRLLLSSGKDNRIICWN 282 (1049)
T ss_pred eeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhccc------ccceeeeccCCCCchhhhcccCCCCeeEec
Confidence 66899999877888888754 4588999873 4577888888 6789999999876 7999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCc-EEEeee
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGT 114 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s 114 (116)
.++++.+..+.....++..+.|+|... .++.++
T Consensus 283 ~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~as 316 (1049)
T KOG0307|consen 283 PNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAAS 316 (1049)
T ss_pred CCCceEeeecCCCCcceeeeeecCCCcchhhhhe
Confidence 999999999987778999999999665 444433
No 191
>KOG0974|consensus
Probab=99.33 E-value=6e-11 Score=77.83 Aligned_cols=105 Identities=14% Similarity=0.113 Sum_probs=88.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.|.+.|..+.|+- ++.++++.++|+.+++|++++.+... ..-+| +..+...++.|+ .++++++|-+.++|
T Consensus 173 GHeG~iF~i~~s~-dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgH------saRvw~~~~~~n--~i~t~gedctcrvW 243 (967)
T KOG0974|consen 173 GHEGSIFSIVTSL-DGRYIASVSDDRSIRLWPIDSREVLGCTGFGH------SARVWACCFLPN--RIITVGEDCTCRVW 243 (967)
T ss_pred ccCCceEEEEEcc-CCcEEEEEecCcceeeeecccccccCcccccc------cceeEEEEeccc--eeEEeccceEEEEE
Confidence 5899999999998 89999999999999999999887665 33345 788999999998 89999999999999
Q ss_pred ECCCCeEEEEeeccc-ccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHL-DAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.. ++.+..+..|. ..+..++..+...+++|++.|
T Consensus 244 ~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~D 279 (967)
T KOG0974|consen 244 GVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGND 279 (967)
T ss_pred ecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccC
Confidence 765 55555676664 468889988888888888765
No 192
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.33 E-value=3.6e-10 Score=68.62 Aligned_cols=107 Identities=24% Similarity=0.415 Sum_probs=86.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeC-CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFD-NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~ 79 (116)
.|...+..+.|+| ++..++.++. ++.+++|+...+..+..+.++ ...+.++.++|++. .+++++.|+.+++
T Consensus 153 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~d~~i~~ 225 (466)
T COG2319 153 GHSESVTSLAFSP-DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGH------TDPVSSLAFSPDGGLLIASGSSDGTIRL 225 (466)
T ss_pred cCcccEEEEEECC-CCCEEEecCCCCCceEEEEcCCCceEEeeccC------CCceEEEEEcCCcceEEEEecCCCcEEE
Confidence 4677888999999 6677777775 999999999987788888877 67899999999987 5556688999999
Q ss_pred EECCCCeEEE-EeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVH-SMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||...+.... .+..|.... ...|+|++..+++++.|
T Consensus 226 wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d 262 (466)
T COG2319 226 WDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSD 262 (466)
T ss_pred EECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCC
Confidence 9988787777 576676654 33899999777766654
No 193
>KOG2919|consensus
Probab=99.32 E-value=3.1e-11 Score=70.92 Aligned_cols=107 Identities=16% Similarity=0.263 Sum_probs=85.3
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEEC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDN 82 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~ 82 (116)
.+-+.+++|+|.+...++.++-...+-||.-..+.++..+-+| .+.|+.++|.++|..++++.. +-.|..||+
T Consensus 207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh------~gGvThL~~~edGn~lfsGaRk~dkIl~WDi 280 (406)
T KOG2919|consen 207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGH------GGGVTHLQWCEDGNKLFSGARKDDKILCWDI 280 (406)
T ss_pred cceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeeccc------CCCeeeEEeccCcCeecccccCCCeEEEEee
Confidence 4668899999988789999998888999988888888888888 789999999999998888765 779999999
Q ss_pred CCC-eEEEEeecccc-cEEEEEE--CCCCcEEEeeecC
Q psy17133 83 VSG-KLVHSMVAHLD-AVTSLAV--DPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~-~~~~~~~~~~~-~v~~~~~--~~~~~~l~~~s~d 116 (116)
+.. ..+..+..|.. .-..|-| .|++++|++|+.|
T Consensus 281 R~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~td 318 (406)
T KOG2919|consen 281 RYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTD 318 (406)
T ss_pred hhccchhhhhhhhccCccceEEEecCCCCceeeccCCC
Confidence 754 44555555543 3334444 6899999998654
No 194
>KOG4328|consensus
Probab=99.31 E-value=4.7e-11 Score=72.60 Aligned_cols=107 Identities=18% Similarity=0.135 Sum_probs=79.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE----EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV----RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 77 (116)
.|...|..++++|-...++++++.|+..+|||++.-+... ....| ...|.++.|+|++-.+++.+.|..|
T Consensus 320 lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~H------rrsV~sAyFSPs~gtl~TT~~D~~I 393 (498)
T KOG4328|consen 320 LHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPH------RRSVNSAYFSPSGGTLLTTCQDNEI 393 (498)
T ss_pred hhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccc------cceeeeeEEcCCCCceEeeccCCce
Confidence 3667899999999888899999999999999998533222 22233 6789999999997669999999999
Q ss_pred EEEECC----CCeEEEEeeccc-----ccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNV----SGKLVHSMVAHL-----DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~----~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~s 114 (116)
++||.. .-+.+..+.... -......|.|+..++++|.
T Consensus 394 Rv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~ 439 (498)
T KOG4328|consen 394 RVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGR 439 (498)
T ss_pred EEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEec
Confidence 999973 233333333111 1244568999999888764
No 195
>KOG1523|consensus
Probab=99.31 E-value=9.2e-11 Score=68.70 Aligned_cols=105 Identities=13% Similarity=0.156 Sum_probs=86.4
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.++|++.+|++ ++..++++-.+..+.||.....+ ...++..| ...++.++|+|....|++++.|..-++|
T Consensus 10 ~~pitchAwn~-drt~iAv~~~~~evhiy~~~~~~~w~~~htls~H------d~~vtgvdWap~snrIvtcs~drnayVw 82 (361)
T KOG1523|consen 10 LEPITCHAWNS-DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEH------DKIVTGVDWAPKSNRIVTCSHDRNAYVW 82 (361)
T ss_pred cCceeeeeecC-CCceEEeccCCceEEEEEecCCCCceeceehhhh------CcceeEEeecCCCCceeEccCCCCcccc
Confidence 57899999999 88999999999999999987544 56677777 5689999999999999999999999999
Q ss_pred EC-CCCeEE--EEeecccccEEEEEECCCCcEEEeeec
Q psy17133 81 DN-VSGKLV--HSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 81 ~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.. ..++-. -.+..+....+++.|+|.++.|++||.
T Consensus 83 ~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSg 120 (361)
T KOG1523|consen 83 TQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSG 120 (361)
T ss_pred ccCCCCeeccceeEEEeccceeeEeecCcCceEEeccC
Confidence 98 444332 223346778999999999999998864
No 196
>KOG1523|consensus
Probab=99.31 E-value=3.9e-11 Score=70.21 Aligned_cols=107 Identities=17% Similarity=0.177 Sum_probs=83.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEEC-CCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDL-ETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~-~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
|.+.|+.++|.| ..+.|++++.|+.-++|.. .+++ +...+.-. +...+++.|+|.+..+++++....|.+
T Consensus 54 Hd~~vtgvdWap-~snrIvtcs~drnayVw~~~~~~~WkptlvLlRi------NrAAt~V~WsP~enkFAVgSgar~isV 126 (361)
T KOG1523|consen 54 HDKIVTGVDWAP-KSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRI------NRAATCVKWSPKENKFAVGSGARLISV 126 (361)
T ss_pred hCcceeEEeecC-CCCceeEccCCCCccccccCCCCeeccceeEEEe------ccceeeEeecCcCceEEeccCccEEEE
Confidence 678899999999 8899999999999999998 4443 33333333 467899999999999999999999999
Q ss_pred EECCCCeEE----EEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLV----HSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|=++.-.-- +.-+.+...|.++.|+|++-.|+.||.|
T Consensus 127 cy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D 167 (361)
T KOG1523|consen 127 CYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTD 167 (361)
T ss_pred EEEecccceehhhhhCCccccceeeeeccCCcceecccccC
Confidence 876532211 1223456789999999999999998865
No 197
>KOG0322|consensus
Probab=99.30 E-value=8.9e-12 Score=71.29 Aligned_cols=70 Identities=17% Similarity=0.244 Sum_probs=64.7
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
.+..+...| +++.+++++-|+++++|+..+.+++..++.| ...+++++|+|+..+++.++.|..|.+|++
T Consensus 253 Gv~gvrIRp-D~KIlATAGWD~RiRVyswrtl~pLAVLkyH------sagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 253 GVSGVRIRP-DGKILATAGWDHRIRVYSWRTLNPLAVLKYH------SAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CccceEEcc-CCcEEeecccCCcEEEEEeccCCchhhhhhh------hcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 456777888 7899999999999999999999999999999 678999999999999999999999999986
No 198
>KOG1063|consensus
Probab=99.29 E-value=2.2e-10 Score=72.80 Aligned_cols=114 Identities=16% Similarity=0.225 Sum_probs=87.5
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
|.|+..|.++.|+| .+..|++++.|.++.+|...+. --+......... +........-|+|++..+++-+.-|-.+
T Consensus 264 ~GHeDWV~sv~W~p-~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~g-g~a~GF~g~lw~~n~~~ii~~g~~Gg~h 341 (764)
T KOG1063|consen 264 MGHEDWVYSVWWHP-EGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVG-GSAGGFWGGLWSPNSNVIIAHGRTGGFH 341 (764)
T ss_pred cCcccceEEEEEcc-chhhheecccCcceEEEecCCccceEEEEEEeeccc-ccccceeeEEEcCCCCEEEEecccCcEE
Confidence 67999999999999 7789999999999999987643 233222211100 0034578889999999999999999999
Q ss_pred EEECCCCe---EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGK---LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|-.+... ....+.+|.+.|+++.|+|.|.+|++.|.|
T Consensus 342 lWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~D 382 (764)
T KOG1063|consen 342 LWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLD 382 (764)
T ss_pred EEeccCccceeeccccccccccceeeeecCCCCEEEEeccc
Confidence 99844332 223356899999999999999999999876
No 199
>KOG2445|consensus
Probab=99.27 E-value=5.6e-10 Score=65.28 Aligned_cols=107 Identities=13% Similarity=0.151 Sum_probs=80.4
Q ss_pred CCCCceEEEEccC--CCcEEEEeeCC-----CeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcCC-CC---E
Q psy17133 3 YNGTPTSIDFVRD--ESTKMVTAFDN-----SACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHPT-LP---L 67 (116)
Q Consensus 3 ~~~~v~~~~~~~~--~~~~l~~~~~~-----~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~---~ 67 (116)
+..+..|+.|+|. ...+|++|+.+ ++++||....+ ..+.++.++ ...|..++|.|+ |+ .
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~------~dpI~di~wAPn~Gr~y~~ 241 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDH------TDPIRDISWAPNIGRSYHL 241 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCC------CCcceeeeeccccCCceee
Confidence 3456678999874 23578888754 47888876533 234556666 779999999997 54 7
Q ss_pred EEEEeCCCeEEEEECCCC--------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 68 TITAHDDRHIRFFDNVSG--------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 68 ~~~~~~d~~i~~~~~~~~--------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.|| |+||.++.. +.+..+..|.+.|..+.|+=.|..|++.+.|
T Consensus 242 lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdD 309 (361)
T KOG2445|consen 242 LAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDD 309 (361)
T ss_pred EEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCC
Confidence 88999999 999998731 2344466788999999999999999998876
No 200
>KOG0642|consensus
Probab=99.26 E-value=1.2e-10 Score=72.27 Aligned_cols=113 Identities=36% Similarity=0.567 Sum_probs=91.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC--c-----------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG--V----------------------------- 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~--~----------------------------- 50 (116)
.|++.++.+.+++ ..+.|++++.|++++.|......+ ..|...... .
T Consensus 394 Ghtdavw~l~~s~-~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev 471 (577)
T KOG0642|consen 394 GHTDAVWLLALSS-TKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEV 471 (577)
T ss_pred ccccceeeeeecc-cccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhh
Confidence 4788999999998 778999999999999998764433 111111000 0
Q ss_pred ---------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 51 ---------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 51 ---------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.....+..+.++|...+.+++.+|+.|+++|..+++.+.....|...++++++.|+|.+|++++.
T Consensus 472 ~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~ 551 (577)
T KOG0642|consen 472 VSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSH 551 (577)
T ss_pred hhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecC
Confidence 11245677888999999999999999999999999999999889999999999999999999987
Q ss_pred C
Q psy17133 116 Q 116 (116)
Q Consensus 116 d 116 (116)
|
T Consensus 552 d 552 (577)
T KOG0642|consen 552 D 552 (577)
T ss_pred C
Confidence 6
No 201
>KOG2315|consensus
Probab=99.26 E-value=4.2e-10 Score=69.97 Aligned_cols=100 Identities=23% Similarity=0.374 Sum_probs=80.0
Q ss_pred CCCCceEEEEccCCCcEE--EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeE
Q psy17133 3 YNGTPTSIDFVRDESTKM--VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHI 77 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l--~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i 77 (116)
..|+|.++.|+| ++..+ +.|..-.++.|+|++ ++++..+.. +.-+.+.|+|.|.+++.++- .|.+
T Consensus 269 k~GPVhdv~W~~-s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e--------gpRN~~~fnp~g~ii~lAGFGNL~G~m 338 (566)
T KOG2315|consen 269 KEGPVHDVTWSP-SGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE--------GPRNTAFFNPHGNIILLAGFGNLPGDM 338 (566)
T ss_pred CCCCceEEEECC-CCCEEEEEEecccceEEEEcCC-CCEeEeCCC--------CCccceEECCCCCEEEEeecCCCCCce
Confidence 478999999999 55443 446678899999987 778887753 36789999999998888765 4789
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
-+||..+.+++..+... .-+-+.|+|||++|+|++
T Consensus 339 EvwDv~n~K~i~~~~a~--~tt~~eW~PdGe~flTAT 373 (566)
T KOG2315|consen 339 EVWDVPNRKLIAKFKAA--NTTVFEWSPDGEYFLTAT 373 (566)
T ss_pred EEEeccchhhccccccC--CceEEEEcCCCcEEEEEe
Confidence 99999998887777543 345689999999999875
No 202
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.26 E-value=9.2e-10 Score=68.75 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=73.2
Q ss_pred CCCCceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCC--e
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDR--H 76 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~--~ 76 (116)
+.+.+....|+| +++.|+..+ .+..|++||+.+++.. .+... .+.+....|+|||+.++ +.+.++ .
T Consensus 200 ~~~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~------~g~~~~~~~SPDG~~la~~~~~~g~~~ 271 (435)
T PRK05137 200 GSSLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQRE-LVGNF------PGMTFAPRFSPDGRKVVMSLSQGGNTD 271 (435)
T ss_pred CCCCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcEE-EeecC------CCcccCcEECCCCCEEEEEEecCCCce
Confidence 446788999999 778777665 2468999999877643 33333 34567889999998665 445444 4
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
|.+||+.+++..+ +..+........|+|||+.|+..+
T Consensus 272 Iy~~d~~~~~~~~-Lt~~~~~~~~~~~spDG~~i~f~s 308 (435)
T PRK05137 272 IYTMDLRSGTTTR-LTDSPAIDTSPSYSPDGSQIVFES 308 (435)
T ss_pred EEEEECCCCceEE-ccCCCCccCceeEcCCCCEEEEEE
Confidence 8888988776544 444445566789999999888655
No 203
>KOG0321|consensus
Probab=99.25 E-value=4.7e-11 Score=75.22 Aligned_cols=103 Identities=19% Similarity=0.224 Sum_probs=81.4
Q ss_pred eEEEEcc--CCCcEEEEeeCCCeEEEEECCCCce------eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 8 TSIDFVR--DESTKMVTAFDNSACVLFDLETGKP------VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 8 ~~~~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
.+..|++ ...+.|+.+.++|.|.++|....+. +..+..| .+.|..+.|.|-...|++++.|.++++
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH------~nAifDl~wapge~~lVsasGDsT~r~ 126 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAH------KNAIFDLKWAPGESLLVSASGDSTIRP 126 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccc------cceeEeeccCCCceeEEEccCCceeee
Confidence 3455543 2446788899999999999874332 2344455 678999999997779999999999999
Q ss_pred EECCCCeEEEE--eecccccEEEEEECCCCc-EEEeeecC
Q psy17133 80 FDNVSGKLVHS--MVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
||++++++... +.+|...+.++||.|+.+ .|++|+.|
T Consensus 127 Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRD 166 (720)
T KOG0321|consen 127 WDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRD 166 (720)
T ss_pred eeeccceeecceeecccccccchhhhccCCCcceeeccCC
Confidence 99999988766 789999999999999654 67788776
No 204
>KOG0974|consensus
Probab=99.25 E-value=2.1e-10 Score=75.34 Aligned_cols=96 Identities=16% Similarity=0.155 Sum_probs=79.6
Q ss_pred EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE-E
Q psy17133 12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVH-S 90 (116)
Q Consensus 12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~-~ 90 (116)
+++ +.=++++|+..+++.+|.....+.-..+.+| .+.+..+.++.+|+++++.++|..+++|++++.+... .
T Consensus 141 ~s~-~~~~i~~gsv~~~iivW~~~~dn~p~~l~GH------eG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~ 213 (967)
T KOG0974|consen 141 DSA-EELYIASGSVFGEIIVWKPHEDNKPIRLKGH------EGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCT 213 (967)
T ss_pred ccC-cEEEEEeccccccEEEEeccccCCcceeccc------CCceEEEEEccCCcEEEEEecCcceeeeecccccccCcc
Confidence 344 4456778888899999998733333357788 7899999999999999999999999999999988876 5
Q ss_pred eecccccEEEEEECCCCcEEEeeecC
Q psy17133 91 MVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 91 ~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.-+|.+++..++|.|. .++|++.|
T Consensus 214 ~fgHsaRvw~~~~~~n--~i~t~ged 237 (967)
T KOG0974|consen 214 GFGHSARVWACCFLPN--RIITVGED 237 (967)
T ss_pred cccccceeEEEEeccc--eeEEeccc
Confidence 6679999999999999 88888876
No 205
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=1.2e-09 Score=68.12 Aligned_cols=102 Identities=15% Similarity=0.026 Sum_probs=70.7
Q ss_pred CCceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-eCCC--eEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-HDDR--HIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d~--~i~ 78 (116)
+.+....|+| +++.|+..+ .+..+++|++.+++..... .. .+......|+|||+.++.. ..++ .|+
T Consensus 199 ~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~~~~l~-~~------~~~~~~~~~SPDG~~La~~~~~~g~~~I~ 270 (429)
T PRK03629 199 QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVA-SF------PRHNGAPAFSPDGSKLAFALSKTGSLNLY 270 (429)
T ss_pred CceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCCeEEcc-CC------CCCcCCeEECCCCCEEEEEEcCCCCcEEE
Confidence 4678899999 778777643 2457999999877543322 11 1234568999999977754 3344 599
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+||+++++..+... +...+....|+|||+.|+..+.
T Consensus 271 ~~d~~tg~~~~lt~-~~~~~~~~~wSPDG~~I~f~s~ 306 (429)
T PRK03629 271 VMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAYTSD 306 (429)
T ss_pred EEECCCCCEEEccC-CCCCcCceEECCCCCEEEEEeC
Confidence 99998887655443 3445678999999998876553
No 206
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.23 E-value=3.3e-09 Score=64.44 Aligned_cols=106 Identities=22% Similarity=0.345 Sum_probs=81.6
Q ss_pred CCCCceEEEEccCCCc-EEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
|...+.++.|+| ++. .+++++.++.+++||...+.... .+.++ .... ...|+|++..+++++.++.+++|
T Consensus 197 ~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~d~~~~~~ 268 (466)
T COG2319 197 HTDPVSSLAFSP-DGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGH------SDSV-VSSFSPDGSLLASGSSDGTIRLW 268 (466)
T ss_pred CCCceEEEEEcC-CcceEEEEecCCCcEEEEECCCCcEEeeecCCC------Ccce-eEeECCCCCEEEEecCCCcEEEe
Confidence 567899999998 666 55555889999999888676666 56666 3333 22799999888899999999999
Q ss_pred ECCCCeE-EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKL-VHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+...... +..+..|...+..+.|.|++..+++++.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d 305 (466)
T COG2319 269 DLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSD 305 (466)
T ss_pred eecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCC
Confidence 9986654 44445677889999999988888876654
No 207
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.23 E-value=2.2e-09 Score=65.75 Aligned_cols=91 Identities=23% Similarity=0.343 Sum_probs=69.2
Q ss_pred cEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133 18 TKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD 96 (116)
Q Consensus 18 ~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 96 (116)
+++ ++-..+++|.+.|..+.+.+.+++.. ......+.++||+++++..+.|+.|.++|+.+.+.+..+... .
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~------~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~ 78 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTG------GAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG-G 78 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-S------TTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-S
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCC------CCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC-C
Confidence 455 44557899999999999999999865 223455778999999999999999999999999999888743 4
Q ss_pred cEEEEEECCCCcEEEeeec
Q psy17133 97 AVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 97 ~v~~~~~~~~~~~l~~~s~ 115 (116)
...++++++||+++++++.
T Consensus 79 ~~~~i~~s~DG~~~~v~n~ 97 (369)
T PF02239_consen 79 NPRGIAVSPDGKYVYVANY 97 (369)
T ss_dssp EEEEEEE--TTTEEEEEEE
T ss_pred CcceEEEcCCCCEEEEEec
Confidence 5788999999999998764
No 208
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.22 E-value=1.5e-10 Score=48.44 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=34.9
Q ss_pred ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 38 KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
+++..+.+| ...|.+++|+|++..+++++.|+.|++||
T Consensus 2 ~~~~~~~~h------~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGH------SSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESS------SSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCC------CCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 567788888 78999999999999999999999999997
No 209
>KOG2139|consensus
Probab=99.21 E-value=1.2e-09 Score=65.25 Aligned_cols=112 Identities=11% Similarity=0.176 Sum_probs=77.2
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-C---ceeEEEecCCc-Cc--CCCCceeEEEEcCCCCEEEEEeC-CC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-G---KPVVRIDSSQF-GV--SGGGGINRVVCHPTLPLTITAHD-DR 75 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~---~~~~~~~~~~~-~~--~~~~~i~~~~~~~~~~~~~~~~~-d~ 75 (116)
...|++++|.|.....++.+... -|.+|.... . ..+.-...+.. .. .....|+++.|.+||..+++++- +.
T Consensus 140 QrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gss 218 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSS 218 (445)
T ss_pred hcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcc
Confidence 35689999999777777777754 588887652 1 11110000000 00 00257999999999998888765 78
Q ss_pred eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 76 HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.|.+||..++..+.......+.++-+.|+||+.+|+.++-|
T Consensus 219 si~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~d 259 (445)
T KOG2139|consen 219 SIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCD 259 (445)
T ss_pred eEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEeccc
Confidence 89999999887766554345678899999999999877644
No 210
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.21 E-value=1e-09 Score=68.39 Aligned_cols=103 Identities=15% Similarity=0.127 Sum_probs=69.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~ 78 (116)
+.+.+.+..|+| +++.|+..+. ...+++||+.+++... +... .+......|+|||+.++ +.+.++...
T Consensus 194 ~~~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~------~g~~~~~~~SPDG~~la~~~~~~g~~~ 265 (427)
T PRK02889 194 SPEPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATGRRRV-VANF------KGSNSAPAWSPDGRTLAVALSRDGNSQ 265 (427)
T ss_pred CCCCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCCCEEE-eecC------CCCccceEECCCCCEEEEEEccCCCce
Confidence 345678899999 7787776653 3469999998776533 3322 23456889999998775 456676655
Q ss_pred EE--ECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FF--DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+| |...+. ...+..+........|+|||+.|+..+
T Consensus 266 Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s 302 (427)
T PRK02889 266 IYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTS 302 (427)
T ss_pred EEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEe
Confidence 55 555444 344444444556788999999887654
No 211
>KOG0649|consensus
Probab=99.20 E-value=1.1e-09 Score=62.51 Aligned_cols=110 Identities=17% Similarity=0.135 Sum_probs=79.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce------eEEEec-CCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP------VVRIDS-SQFGVSGGGGINRVVCHPTLPLTITAHDDR 75 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~------~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 75 (116)
|.++++.++|.. .+|++++ ||.|+-|..+.... +-+.+. .......-..|+++.+.|...-++.++.|+
T Consensus 61 hdgpiy~~~f~d---~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~ 136 (325)
T KOG0649|consen 61 HDGPIYYLAFHD---DFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDG 136 (325)
T ss_pred cCCCeeeeeeeh---hheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCe
Confidence 789999999973 6777777 49999887653211 111111 110011123688999999877777777999
Q ss_pred eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 76 HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.++.||+++|+..+.+++|.+-+.+++--.....+++|+.|
T Consensus 137 ~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~ED 177 (325)
T KOG0649|consen 137 VIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAED 177 (325)
T ss_pred EEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCC
Confidence 99999999999999999999999999874444556677765
No 212
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.20 E-value=1.6e-09 Score=67.61 Aligned_cols=102 Identities=22% Similarity=0.130 Sum_probs=70.7
Q ss_pred CCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCC--eE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDR--HI 77 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~--~i 77 (116)
...+....|+| +++.|+..+. ...+++|++.+++.. .+... .+......|+|+|+.++ +.+.++ .|
T Consensus 203 ~~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~------~g~~~~~~~SpDG~~l~~~~s~~g~~~I 274 (433)
T PRK04922 203 AEPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATGQRE-LVASF------RGINGAPSFSPDGRRLALTLSRDGNPEI 274 (433)
T ss_pred CCccccccCCC-CCCEEEEEecCCCCcEEEEEECCCCCEE-EeccC------CCCccCceECCCCCEEEEEEeCCCCceE
Confidence 34577889999 7787777653 356999999877643 23222 23345789999998665 444444 69
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++||+.+++... +..+.......+|+|||++|+..+
T Consensus 275 y~~d~~~g~~~~-lt~~~~~~~~~~~spDG~~l~f~s 310 (433)
T PRK04922 275 YVMDLGSRQLTR-LTNHFGIDTEPTWAPDGKSIYFTS 310 (433)
T ss_pred EEEECCCCCeEE-CccCCCCccceEECCCCCEEEEEE
Confidence 999998877543 443444456789999999888665
No 213
>KOG1524|consensus
Probab=99.19 E-value=2.7e-10 Score=71.04 Aligned_cols=92 Identities=14% Similarity=0.166 Sum_probs=71.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.|-|.+++|++ ..+.+++|++|-+.++||.. |+.+..-..| ...|++++|+|+ +.++.++- ++++
T Consensus 184 AHDGiiL~~~W~~-~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~------ey~ITSva~npd-~~~~v~S~-nt~R--- 250 (737)
T KOG1524|consen 184 AHDGLVLSLSWST-QSNIIASGGEDFRFKIWDAQ-GANLFTSAAE------EYAITSVAFNPE-KDYLLWSY-NTAR--- 250 (737)
T ss_pred ccCcEEEEeecCc-cccceeecCCceeEEeeccc-CcccccCChh------ccceeeeeeccc-cceeeeee-eeee---
Confidence 3789999999999 78999999999999999976 7777777777 568999999999 54444431 2222
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.-+...+.|..++|++||..++.|+
T Consensus 251 --------~~~p~~GSifnlsWS~DGTQ~a~gt 275 (737)
T KOG1524|consen 251 --------FSSPRVGSIFNLSWSADGTQATCGT 275 (737)
T ss_pred --------ecCCCccceEEEEEcCCCceeeccc
Confidence 1123457899999999999988665
No 214
>KOG3881|consensus
Probab=99.18 E-value=2.5e-10 Score=68.33 Aligned_cols=95 Identities=23% Similarity=0.331 Sum_probs=79.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE-EecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR-IDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
+.+++++...| ++++++++...+.+..+|.+.++.... +++- .+.+.++..+|..+++++++-|.+++|+|+
T Consensus 247 E~~is~~~l~p-~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~------tGsirsih~hp~~~~las~GLDRyvRIhD~ 319 (412)
T KOG3881|consen 247 ENPISSTGLTP-SGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGI------TGSIRSIHCHPTHPVLASCGLDRYVRIHDI 319 (412)
T ss_pred cCcceeeeecC-CCcEEEEecccchhheecccCceeeccccCCc------cCCcceEEEcCCCceEEeeccceeEEEeec
Confidence 45678888899 889999999999999999998887766 6666 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQ 106 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~ 106 (116)
++.+++.... -...++.+.+.++
T Consensus 320 ktrkll~kvY-vKs~lt~il~~~~ 342 (412)
T KOG3881|consen 320 KTRKLLHKVY-VKSRLTFILLRDD 342 (412)
T ss_pred ccchhhhhhh-hhccccEEEecCC
Confidence 9977776654 2345666666554
No 215
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.18 E-value=5.5e-09 Score=63.08 Aligned_cols=108 Identities=14% Similarity=0.146 Sum_probs=69.4
Q ss_pred CceEEEEccCCCcEEEEeeC-CCeEEEEECCC--Cc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFD-NSACVLFDLET--GK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRF 79 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~-~~~v~i~~~~~--~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~ 79 (116)
.+..+.|+| ++++++++.. ++.|.+|++.. ++ .+..+...............+.++|++++++++.. ++.|.+
T Consensus 176 ~p~~~~~~p-dg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v 254 (330)
T PRK11028 176 GPRHMVFHP-NQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISV 254 (330)
T ss_pred CCceEEECC-CCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEE
Confidence 356789999 7788877765 89999999873 32 22233211000000122346889999998888754 789999
Q ss_pred EECCCCe----EEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 80 FDNVSGK----LVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 80 ~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
|++.... .+..... ......+.++|+|++|++++.
T Consensus 255 ~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~ 293 (330)
T PRK11028 255 FSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQ 293 (330)
T ss_pred EEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEc
Confidence 9985432 2222221 124568899999999987653
No 216
>KOG0650|consensus
Probab=99.18 E-value=4.6e-11 Score=74.93 Aligned_cols=105 Identities=20% Similarity=0.236 Sum_probs=88.8
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
-|.|.++.|+| ...++++++. ..|++||+..+..++.+... ...+.+++++|.|.-++.++.|+.+..+|+.
T Consensus 566 kG~vq~v~FHP-s~p~lfVaTq-~~vRiYdL~kqelvKkL~tg------~kwiS~msihp~GDnli~gs~d~k~~WfDld 637 (733)
T KOG0650|consen 566 KGLVQRVKFHP-SKPYLFVATQ-RSVRIYDLSKQELVKKLLTG------SKWISSMSIHPNGDNLILGSYDKKMCWFDLD 637 (733)
T ss_pred CCceeEEEecC-CCceEEEEec-cceEEEehhHHHHHHHHhcC------CeeeeeeeecCCCCeEEEecCCCeeEEEEcc
Confidence 46789999999 6778887774 57999999887777777655 4568999999999999999999999999997
Q ss_pred CC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 84 SG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 84 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
-+ +..+.+..|...+++++|++.-..|++++.|
T Consensus 638 lsskPyk~lr~H~~avr~Va~H~ryPLfas~sdD 671 (733)
T KOG0650|consen 638 LSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDD 671 (733)
T ss_pred cCcchhHHhhhhhhhhhhhhhccccceeeeecCC
Confidence 43 5566777889999999999999999999876
No 217
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.17 E-value=1.4e-08 Score=62.27 Aligned_cols=98 Identities=16% Similarity=0.245 Sum_probs=69.9
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEECCCCe
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFDNVSGK 86 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~ 86 (116)
..+.|+| +++++++++.++.+.++|+.+++.+.+++.. .....+++++||+++++++ ..+.+.++|.++.+
T Consensus 40 ~~~~~s~-Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-------~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle 111 (369)
T PF02239_consen 40 AGLKFSP-DGRYLYVANRDGTVSVIDLATGKVVATIKVG-------GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLE 111 (369)
T ss_dssp EEEE-TT--SSEEEEEETTSEEEEEETTSSSEEEEEE-S-------SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--
T ss_pred eEEEecC-CCCEEEEEcCCCeEEEEECCcccEEEEEecC-------CCcceEEEcCCCCEEEEEecCCCceeEecccccc
Confidence 3467889 7888888899999999999999999998766 3578899999999887665 68999999999999
Q ss_pred EEEEeecc-------cccEEEEEECCCCcEEEee
Q psy17133 87 LVHSMVAH-------LDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 87 ~~~~~~~~-------~~~v~~~~~~~~~~~l~~~ 113 (116)
.++.+... ..++..+..+|....++..
T Consensus 112 ~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~ 145 (369)
T PF02239_consen 112 PVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVN 145 (369)
T ss_dssp EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEE
T ss_pred ceeecccccccccccCCCceeEEecCCCCEEEEE
Confidence 88876532 2356677778877755443
No 218
>KOG3914|consensus
Probab=99.17 E-value=1.3e-10 Score=69.51 Aligned_cols=84 Identities=12% Similarity=0.115 Sum_probs=68.1
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
|.|.+.+++++|+| ++++|+++..|..|++-.......+..| .+| ...|..++.-++. .|++++.|+++++
T Consensus 148 lGhvSml~dVavS~-D~~~IitaDRDEkIRvs~ypa~f~IesfclGH------~eFVS~isl~~~~-~LlS~sGD~tlr~ 219 (390)
T KOG3914|consen 148 LGHVSMLLDVAVSP-DDQFIITADRDEKIRVSRYPATFVIESFCLGH------KEFVSTISLTDNY-LLLSGSGDKTLRL 219 (390)
T ss_pred hhhhhhhheeeecC-CCCEEEEecCCceEEEEecCcccchhhhcccc------HhheeeeeeccCc-eeeecCCCCcEEE
Confidence 46788899999999 7799999999999999777655455554 356 6678888887654 5899999999999
Q ss_pred EECCCCeEEEEee
Q psy17133 80 FDNVSGKLVHSMV 92 (116)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (116)
||+.+|+.+..+.
T Consensus 220 Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 220 WDITSGKLLDTCD 232 (390)
T ss_pred EecccCCcccccc
Confidence 9999998776553
No 219
>KOG1587|consensus
Probab=99.13 E-value=7.3e-10 Score=70.41 Aligned_cols=108 Identities=18% Similarity=0.219 Sum_probs=80.8
Q ss_pred CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEE
Q psy17133 1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIR 78 (116)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~ 78 (116)
+.|.+.|.++.++|-....+++++ |-.++||... ...++..+..+ ...+++++|+|..+ .++++..+|.+.
T Consensus 395 ~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~------~~~v~~vaWSptrpavF~~~d~~G~l~ 467 (555)
T KOG1587|consen 395 ITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSS------PDYVTDVAWSPTRPAVFATVDGDGNLD 467 (555)
T ss_pred cccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhc------cceeeeeEEcCcCceEEEEEcCCCcee
Confidence 468899999999996555555555 8899999987 56677777766 45699999999865 667788899999
Q ss_pred EEECCCC--eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 79 FFDNVSG--KLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 79 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+||+... +..............+.|++.|+.|+.|..
T Consensus 468 iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~ 506 (555)
T KOG1587|consen 468 IWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDA 506 (555)
T ss_pred hhhhhccccCCcccccccccccceeecCCCCcEEEEecC
Confidence 9998643 233333333445677788888999988753
No 220
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.13 E-value=1.1e-08 Score=63.93 Aligned_cols=101 Identities=11% Similarity=0.101 Sum_probs=66.8
Q ss_pred CCceEEEEccCCCcEEEEe-eCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-C--eEE
Q psy17133 5 GTPTSIDFVRDESTKMVTA-FDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-R--HIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~-~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~--~i~ 78 (116)
+.+....|+| +++.|+.. ..+ ..|++||+.+++... +... ...+....|+|+++.++..+.+ + .|.
T Consensus 243 ~~~~~~~~SP-DG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~------~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy 314 (429)
T PRK03629 243 RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDG------RSNNTEPTWFPDSQNLAYTSDQAGRPQVY 314 (429)
T ss_pred CCcCCeEECC-CCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCC------CCCcCceEECCCCCEEEEEeCCCCCceEE
Confidence 3345689999 77777654 333 368899998776543 3332 2356789999999988766654 3 455
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.+++.+++... +...........|+|||++|+..+
T Consensus 315 ~~d~~~g~~~~-lt~~~~~~~~~~~SpDG~~Ia~~~ 349 (429)
T PRK03629 315 KVNINGGAPQR-ITWEGSQNQDADVSSDGKFMVMVS 349 (429)
T ss_pred EEECCCCCeEE-eecCCCCccCEEECCCCCEEEEEE
Confidence 66777665433 332333456788999999987654
No 221
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.11 E-value=1e-08 Score=63.47 Aligned_cols=103 Identities=22% Similarity=0.235 Sum_probs=80.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC----eEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR----HIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~----~i~ 78 (116)
..+.|.++..+| +|++++++....++.+.|+++++....-+.. .+-|+.+.|+|+++++|.+-.++ .|+
T Consensus 400 ~lg~I~av~vs~-dGK~~vvaNdr~el~vididngnv~~idkS~------~~lItdf~~~~nsr~iAYafP~gy~tq~Ik 472 (668)
T COG4946 400 DLGNIEAVKVSP-DGKKVVVANDRFELWVIDIDNGNVRLIDKSE------YGLITDFDWHPNSRWIAYAFPEGYYTQSIK 472 (668)
T ss_pred CccceEEEEEcC-CCcEEEEEcCceEEEEEEecCCCeeEecccc------cceeEEEEEcCCceeEEEecCcceeeeeEE
Confidence 457889999999 8899999998999999999988754433333 46799999999999999877665 599
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
++|+.+++...... ..+.-.+-+|.|++++|.--
T Consensus 473 lydm~~~Kiy~vTT-~ta~DfsPaFD~d~ryLYfL 506 (668)
T COG4946 473 LYDMDGGKIYDVTT-PTAYDFSPAFDPDGRYLYFL 506 (668)
T ss_pred EEecCCCeEEEecC-CcccccCcccCCCCcEEEEE
Confidence 99999887765543 33344567899999987643
No 222
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.11 E-value=2.3e-08 Score=62.04 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=81.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCC-eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNS-ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~-~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
+.+.|.-..+.. +++.++.|..++ .+-++|..+++ +..+... -+.|..+..+|+|+.++.+.....+.+.|
T Consensus 358 ~~~~VrY~r~~~-~~e~~vigt~dgD~l~iyd~~~~e-~kr~e~~------lg~I~av~vs~dGK~~vvaNdr~el~vid 429 (668)
T COG4946 358 KKGGVRYRRIQV-DPEGDVIGTNDGDKLGIYDKDGGE-VKRIEKD------LGNIEAVKVSPDGKKVVVANDRFELWVID 429 (668)
T ss_pred CCCceEEEEEcc-CCcceEEeccCCceEEEEecCCce-EEEeeCC------ccceEEEEEcCCCcEEEEEcCceEEEEEE
Confidence 445555556655 445677777776 89999998664 4555555 46799999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+.++.....-+...+.|+.+.|+|+++++|-+
T Consensus 430 idngnv~~idkS~~~lItdf~~~~nsr~iAYa 461 (668)
T COG4946 430 IDNGNVRLIDKSEYGLITDFDWHPNSRWIAYA 461 (668)
T ss_pred ecCCCeeEecccccceeEEEEEcCCceeEEEe
Confidence 99998876666677889999999999999743
No 223
>KOG4497|consensus
Probab=99.11 E-value=6.7e-09 Score=61.63 Aligned_cols=103 Identities=16% Similarity=0.194 Sum_probs=76.2
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNVS 84 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~~ 84 (116)
.|.-+.|..+....+.....++.|.+|++...+--..+... +..+..++|+|+|+.+ .+..-+-.|.+|.+.+
T Consensus 50 ki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg------~agls~~~WSPdgrhiL~tseF~lriTVWSL~t 123 (447)
T KOG4497|consen 50 KIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG------QAGLSSISWSPDGRHILLTSEFDLRITVWSLNT 123 (447)
T ss_pred HhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC------CCcceeeeECCCcceEeeeecceeEEEEEEecc
Confidence 45667888744345555678999999999877666666655 5689999999999755 4555689999999976
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.+... +...+..+..++|+|||++.+..++
T Consensus 124 ~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 124 QKGYL-LPHPKTNVKGYAFHPDGQFCAILSR 153 (447)
T ss_pred ceeEE-ecccccCceeEEECCCCceeeeeec
Confidence 65543 3323456789999999999887653
No 224
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.10 E-value=1.2e-08 Score=63.64 Aligned_cols=102 Identities=15% Similarity=0.077 Sum_probs=69.0
Q ss_pred CCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCC--eE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDR--HI 77 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~--~i 77 (116)
...+....|+| +++.|+..+. ...|++|++.+++... +... .+......|+|+|+.++ +...++ .|
T Consensus 198 ~~~~~~p~wSp-DG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~------~g~~~~~~~SpDG~~la~~~~~~g~~~I 269 (430)
T PRK00178 198 REPILSPRWSP-DGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNF------EGLNGAPAWSPDGSKLAFVLSKDGNPEI 269 (430)
T ss_pred CCceeeeeECC-CCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCC------CCCcCCeEECCCCCEEEEEEccCCCceE
Confidence 34567889999 7787766543 2468999998776433 3222 23355689999998776 444444 68
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.++|+.+++... +..+........|+|||+.|+..+
T Consensus 270 y~~d~~~~~~~~-lt~~~~~~~~~~~spDg~~i~f~s 305 (430)
T PRK00178 270 YVMDLASRQLSR-VTNHPAIDTEPFWGKDGRTLYFTS 305 (430)
T ss_pred EEEECCCCCeEE-cccCCCCcCCeEECCCCCEEEEEE
Confidence 888998876544 433444556788999999877544
No 225
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.10 E-value=2.5e-08 Score=60.30 Aligned_cols=103 Identities=14% Similarity=0.275 Sum_probs=67.9
Q ss_pred CceEEEEccCCCcEEEEe-eCCCeEEEEECCCCceeEE-----EecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEE
Q psy17133 6 TPTSIDFVRDESTKMVTA-FDNSACVLFDLETGKPVVR-----IDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIR 78 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~ 78 (116)
.+..+.++| ++++++++ ..++.|.+||+.+...+.. ..... ......+.|+|+++++++... ++.|.
T Consensus 127 ~~~~~~~~p-~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-----g~~p~~~~~~pdg~~lyv~~~~~~~v~ 200 (330)
T PRK11028 127 GCHSANIDP-DNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-----GAGPRHMVFHPNQQYAYCVNELNSSVD 200 (330)
T ss_pred cccEeEeCC-CCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-----CCCCceEEECCCCCEEEEEecCCCEEE
Confidence 356778999 67777554 4678999999976332211 11111 234678899999999988776 89999
Q ss_pred EEECCC--Ce--EEEEeecc------cccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVS--GK--LVHSMVAH------LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~--~~--~~~~~~~~------~~~v~~~~~~~~~~~l~~~s 114 (116)
+|++.. ++ .+..+... ......+.++|++++++++.
T Consensus 201 v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~ 246 (330)
T PRK11028 201 VWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACD 246 (330)
T ss_pred EEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEec
Confidence 999973 33 23333211 11234688999999998764
No 226
>KOG1963|consensus
Probab=99.08 E-value=9.9e-09 Score=66.75 Aligned_cols=66 Identities=23% Similarity=0.291 Sum_probs=52.9
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC--C--eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS--G--KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.|.-.+++.+++|++++++++..||.|.+|.--. . ...+.+..|...|.+++|+++|.+|++|++.
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E 272 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGRE 272 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccc
Confidence 3444468899999999999999999999996322 2 2234566788899999999999999999863
No 227
>KOG1188|consensus
Probab=99.08 E-value=2.3e-09 Score=63.46 Aligned_cols=91 Identities=19% Similarity=0.204 Sum_probs=68.5
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEEEECCCCeEEEE--eec
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRFFDNVSGKLVHS--MVA 93 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~--~~~ 93 (116)
..++++-.++.|++||..+++.+..|+++ +..++.++|.. ....+.+++.||+|++||++....... +.+
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~------~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~ 114 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGP------PATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQ 114 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCC------CCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccC
Confidence 45777888999999999999999999998 66788888876 355889999999999999986544333 333
Q ss_pred cc-ccEEEEEECCCCcEEEeee
Q psy17133 94 HL-DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 94 ~~-~~v~~~~~~~~~~~l~~~s 114 (116)
+. .+..+++.+-.++.+++|.
T Consensus 115 ~~~~~f~~ld~nck~~ii~~Gt 136 (376)
T KOG1188|consen 115 QSGTPFICLDLNCKKNIIACGT 136 (376)
T ss_pred CCCCcceEeeccCcCCeEEecc
Confidence 43 3455565555677777664
No 228
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.06 E-value=1.6e-08 Score=63.48 Aligned_cols=101 Identities=16% Similarity=0.069 Sum_probs=67.4
Q ss_pred CCceEEEEccCCCcEEEEeeC-C--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCC--eEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFD-N--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDR--HIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~-~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~--~i~ 78 (116)
..+....|+| +++.|+..+. + ..|+++|+.+++... +... .+......|+||++.++. ...++ .|.
T Consensus 218 ~~~~~p~wSP-DG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~------~g~~~~~~wSPDG~~La~~~~~~g~~~Iy 289 (448)
T PRK04792 218 EPLMSPAWSP-DGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSF------PGINGAPRFSPDGKKLALVLSKDGQPEIY 289 (448)
T ss_pred CcccCceECC-CCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCC------CCCcCCeeECCCCCEEEEEEeCCCCeEEE
Confidence 4567889999 7777776542 2 368889998776432 2221 123456889999997754 45555 488
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++|+.+++... +..+.......+|+||+++|+..+
T Consensus 290 ~~dl~tg~~~~-lt~~~~~~~~p~wSpDG~~I~f~s 324 (448)
T PRK04792 290 VVDIATKALTR-ITRHRAIDTEPSWHPDGKSLIFTS 324 (448)
T ss_pred EEECCCCCeEE-CccCCCCccceEECCCCCEEEEEE
Confidence 88988776544 333444567789999999887654
No 229
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.05 E-value=2.7e-08 Score=62.32 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=68.6
Q ss_pred CCCceEEEEccCCCcEEE-EeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C--CeE
Q psy17133 4 NGTPTSIDFVRDESTKMV-TAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D--RHI 77 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~-~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d--~~i 77 (116)
.+.+....|+| +++.|+ +.+.+ ..|++||+.+++. ..+..+ ........|+||++.++..+. + ..|
T Consensus 245 ~g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~------~~~~~~~~~spDG~~i~f~s~~~g~~~I 316 (435)
T PRK05137 245 PGMTFAPRFSP-DGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDS------PAIDTSPSYSPDGSQIVFESDRSGSPQL 316 (435)
T ss_pred CCcccCcEECC-CCCEEEEEEecCCCceEEEEECCCCce-EEccCC------CCccCceeEcCCCCEEEEEECCCCCCeE
Confidence 34567789999 677664 44444 4577889886654 444444 334567899999998877654 2 368
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.++|+..++... +......+....|+|+|+.|+..+
T Consensus 317 y~~d~~g~~~~~-lt~~~~~~~~~~~SpdG~~ia~~~ 352 (435)
T PRK05137 317 YVMNADGSNPRR-ISFGGGRYSTPVWSPRGDLIAFTK 352 (435)
T ss_pred EEEECCCCCeEE-eecCCCcccCeEECCCCCEEEEEE
Confidence 888987665544 332344566788999999987654
No 230
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.05 E-value=2.4e-08 Score=61.99 Aligned_cols=101 Identities=17% Similarity=0.064 Sum_probs=68.2
Q ss_pred CCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCC--CeEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDD--RHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d--~~i~ 78 (116)
..+....|+| ++++++.... ...+++|++.+++..... .. .+......|+|+++.++. ...+ ..|+
T Consensus 190 ~~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g~~~~~~-~~------~~~~~~~~~spDg~~l~~~~~~~~~~~i~ 261 (417)
T TIGR02800 190 EPILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATGQREKVA-SF------PGMNGAPAFSPDGSKLAVSLSKDGNPDIY 261 (417)
T ss_pred CceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCCCEEEee-cC------CCCccceEECCCCCEEEEEECCCCCccEE
Confidence 3467788999 7788776653 257999999877543322 22 234567899999986654 4433 4688
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+|++.++.... +..+........|+|+++.|+..+
T Consensus 262 ~~d~~~~~~~~-l~~~~~~~~~~~~s~dg~~l~~~s 296 (417)
T TIGR02800 262 VMDLDGKQLTR-LTNGPGIDTEPSWSPDGKSIAFTS 296 (417)
T ss_pred EEECCCCCEEE-CCCCCCCCCCEEECCCCCEEEEEE
Confidence 99998776543 333334445678999999887654
No 231
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.00 E-value=1.3e-08 Score=63.60 Aligned_cols=99 Identities=12% Similarity=0.154 Sum_probs=64.7
Q ss_pred CCCceEEEEccCCCcEEEEee-CCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
...+....|+| +++.++..+ .++...+|++.. +.....+ .+ .. ....|+|+++.++..+.++ +.+||
T Consensus 291 ~~~~~~~~wSp-DG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~------~~--~~~~~SpDG~~ia~~~~~~-i~~~D 359 (429)
T PRK01742 291 AGNNTEPSWSP-DGQSILFTSDRSGSPQVYRMSASGGGASLV-GG------RG--YSAQISADGKTLVMINGDN-VVKQD 359 (429)
T ss_pred CCCcCCEEECC-CCCEEEEEECCCCCceEEEEECCCCCeEEe-cC------CC--CCccCCCCCCEEEEEcCCC-EEEEE
Confidence 34567899999 677666544 566777776542 2222333 23 22 3467999999988877655 55599
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+.+++........ ....+.|+|+|++|+.++.
T Consensus 360 l~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~ 391 (429)
T PRK01742 360 LTSGSTEVLSSTF--LDESPSISPNGIMIIYSST 391 (429)
T ss_pred CCCCCeEEecCCC--CCCCceECCCCCEEEEEEc
Confidence 9888765333222 2356789999999988764
No 232
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.00 E-value=1e-08 Score=64.41 Aligned_cols=74 Identities=12% Similarity=0.169 Sum_probs=60.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
+..+.+.+++++| +.+.++.|..||.|.+||...+.. .+... .-.++.++|+|+|..+++++..|.+.+||
T Consensus 257 pL~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD~~~~~t--~~~ka------~~~P~~iaWHp~gai~~V~s~qGelQ~FD 327 (545)
T PF11768_consen 257 PLPSQVICCARSP-SEDKLVLGCEDGSIILYDTTRGVT--LLAKA------EFIPTLIAWHPDGAIFVVGSEQGELQCFD 327 (545)
T ss_pred ecCCcceEEecCc-ccceEEEEecCCeEEEEEcCCCee--eeeee------cccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence 3567899999999 779999999999999999875532 22222 23578999999999999999999999999
Q ss_pred CCC
Q psy17133 82 NVS 84 (116)
Q Consensus 82 ~~~ 84 (116)
+.-
T Consensus 328 ~AL 330 (545)
T PF11768_consen 328 MAL 330 (545)
T ss_pred eec
Confidence 764
No 233
>KOG4227|consensus
Probab=99.00 E-value=5.3e-08 Score=59.25 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=82.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|.. +..++.+|..+++|..-|+++.+.+..+..... .+.|..+..+|....+++.+.++.|.+||+
T Consensus 104 H~SNIF~L~F~~-~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~----~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~ 178 (609)
T KOG4227|consen 104 HRSNIFSLEFDL-ENRFLYSGERWGTVIKHDIETKQSIYVANENNN----RGDVYHMDQHPTDNTLIVVTRAKLVSFIDN 178 (609)
T ss_pred cccceEEEEEcc-CCeeEecCCCcceeEeeecccceeeeeecccCc----ccceeecccCCCCceEEEEecCceEEEEec
Confidence 557899999998 778999999999999999998887777654432 568999999999999999999999999998
Q ss_pred CCCe-E--EEEeecccccEEEEEECCCCc-EEEeee
Q psy17133 83 VSGK-L--VHSMVAHLDAVTSLAVDPQGL-YILSGT 114 (116)
Q Consensus 83 ~~~~-~--~~~~~~~~~~v~~~~~~~~~~-~l~~~s 114 (116)
+... . +............+.|+|... .|++++
T Consensus 179 Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~ 214 (609)
T KOG4227|consen 179 RDRQNPISLVLPANSGKNFYTAEFHPETPALILVNS 214 (609)
T ss_pred cCCCCCCceeeecCCCccceeeeecCCCceeEEecc
Confidence 7544 1 222223344567788999655 444443
No 234
>KOG4547|consensus
Probab=98.99 E-value=2.2e-08 Score=62.78 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=58.7
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+|.+.+.++.++.+-..+.+++.|..+..|+.+.++..+.+......+.+++.+||+.++++++.
T Consensus 100 ~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as~ 164 (541)
T KOG4547|consen 100 KHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTASR 164 (541)
T ss_pred CCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEeccc
Confidence 55678899988888889999999999999999999999999888888999999999999998875
No 235
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.99 E-value=7e-08 Score=60.37 Aligned_cols=101 Identities=19% Similarity=0.165 Sum_probs=63.9
Q ss_pred CCceEEEEccCCCcEEEEeeC-CCeEEEE--ECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC---eEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFD-NSACVLF--DLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR---HIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~-~~~v~i~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~---~i~ 78 (116)
+......|+| +++.++..+. .+...+| +..+++. ..+... ........|+|+|+.++..+.++ .|.
T Consensus 284 ~~~~~~~wSp-DG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~------g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~ 355 (427)
T PRK02889 284 GIDTEPFFSP-DGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFT------GSYNTSPRISPDGKLLAYISRVGGAFKLY 355 (427)
T ss_pred CCCcCeEEcC-CCCEEEEEecCCCCcEEEEEECCCCce-EEEecC------CCCcCceEECCCCCEEEEEEccCCcEEEE
Confidence 3456788999 7777765543 3444454 5554443 222222 12234578999999888766543 699
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+||+.+++...... . .......|+|+|+.|+.++.
T Consensus 356 v~d~~~g~~~~lt~-~-~~~~~p~~spdg~~l~~~~~ 390 (427)
T PRK02889 356 VQDLATGQVTALTD-T-TRDESPSFAPNGRYILYATQ 390 (427)
T ss_pred EEECCCCCeEEccC-C-CCccCceECCCCCEEEEEEe
Confidence 99998877544332 2 23467899999999886653
No 236
>KOG2321|consensus
Probab=98.99 E-value=2.6e-08 Score=62.85 Aligned_cols=108 Identities=9% Similarity=0.037 Sum_probs=81.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCC-----CceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGG-----GGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.+.+.++..++ ...+|++|+.++.|..||..+...+..+........+. ..|+++.|+-+|-.+++|..+|.+.
T Consensus 175 ~~~lN~v~in~-~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~ 253 (703)
T KOG2321|consen 175 SGELNVVSINE-EHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVL 253 (703)
T ss_pred cccceeeeecC-ccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEE
Confidence 36788888888 66788888899999999999877766665443211112 3489999999999999999999999
Q ss_pred EEECCCCeEEEEee-cccccEEEEEECCC--CcEEEe
Q psy17133 79 FFDNVSGKLVHSMV-AHLDAVTSLAVDPQ--GLYILS 112 (116)
Q Consensus 79 ~~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~ 112 (116)
|||+++.+++..-. ...-++..+.|.+. .+.+++
T Consensus 254 iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S 290 (703)
T KOG2321|consen 254 IYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVS 290 (703)
T ss_pred EEEcccCCceeecccCCccceeeecccccCCCceEEe
Confidence 99999887765433 33457888888765 344544
No 237
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.98 E-value=9.2e-08 Score=59.94 Aligned_cols=101 Identities=15% Similarity=0.115 Sum_probs=65.8
Q ss_pred CCceEEEEccCCCcEEE-EeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CC--eEE
Q psy17133 5 GTPTSIDFVRDESTKMV-TAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DR--HIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~-~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~--~i~ 78 (116)
+...+..|+| +++.++ +.+.+ ..|++||+.+++. ..+..+ .......+|+||++.++..+. ++ .|.
T Consensus 248 g~~~~~~~Sp-DG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~------~~~~~~~~~spDG~~l~f~sd~~g~~~iy 319 (433)
T PRK04922 248 GINGAPSFSP-DGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNH------FGIDTEPTWAPDGKSIYFTSDRGGRPQIY 319 (433)
T ss_pred CCccCceECC-CCCEEEEEEeCCCCceEEEEECCCCCe-EECccC------CCCccceEECCCCCEEEEEECCCCCceEE
Confidence 3445789999 666654 44444 3699999987754 344433 234567899999998877654 33 477
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++++.+++...... ........+|+|+|++++..+
T Consensus 320 ~~dl~~g~~~~lt~-~g~~~~~~~~SpDG~~Ia~~~ 354 (433)
T PRK04922 320 RVAASGGSAERLTF-QGNYNARASVSPDGKKIAMVH 354 (433)
T ss_pred EEECCCCCeEEeec-CCCCccCEEECCCCCEEEEEE
Confidence 77877666543322 223345689999999987654
No 238
>KOG1310|consensus
Probab=98.98 E-value=2.3e-09 Score=67.21 Aligned_cols=71 Identities=23% Similarity=0.317 Sum_probs=60.7
Q ss_pred eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cccccEEEEEECC--CCcEEEeeecC
Q psy17133 40 VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVDP--QGLYILSGTYQ 116 (116)
Q Consensus 40 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~s~d 116 (116)
..++.+| ++.|+++.|+.+|.++++|++|-.+.|||.-..++++.+. +|.+-|.++.|-| ..+++++|+.|
T Consensus 43 E~eL~GH------~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgD 116 (758)
T KOG1310|consen 43 EAELTGH------TGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGD 116 (758)
T ss_pred hhhhccc------cceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCc
Confidence 4556677 8899999999999999999999999999998888887775 7899999999988 45677787765
No 239
>KOG1587|consensus
Probab=98.98 E-value=3.5e-08 Score=63.00 Aligned_cols=110 Identities=21% Similarity=0.192 Sum_probs=74.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRF 79 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~ 79 (116)
...|+++.|+|.+.+.++.|..+|+|.+||+..+.. ...+..+ ...|...+..+.|-.+.. -+++++.||.|..
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~--~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~ 319 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSAL--EVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICS 319 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccc--cccCCcCeEEEEEeccCCCCceEEEecCCcEee
Confidence 467899999998889999999999999999986554 2222211 123467888999986544 4888888999999
Q ss_pred EECCCCeE------EEEee------cccccEEEEEECCC-CcEEEeeec
Q psy17133 80 FDNVSGKL------VHSMV------AHLDAVTSLAVDPQ-GLYILSGTY 115 (116)
Q Consensus 80 ~~~~~~~~------~~~~~------~~~~~v~~~~~~~~-~~~l~~~s~ 115 (116)
|+++.-.. ..... .....+++++|.+. ...++.|+.
T Consensus 320 W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe 368 (555)
T KOG1587|consen 320 WDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTE 368 (555)
T ss_pred eeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcC
Confidence 98763221 11111 12346788999874 344555543
No 240
>KOG4497|consensus
Probab=98.96 E-value=3.9e-09 Score=62.59 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=77.6
Q ss_pred EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCE-EEEEeCCCeEEEEECCCCeE
Q psy17133 9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL-TITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~ 87 (116)
-..|+| +|+++++.++- .+.|-|.++-+....+..- ..|..+.|..+..+ ++....++.|.+|++...+-
T Consensus 13 ~c~fSp-~g~yiAs~~~y-rlviRd~~tlq~~qlf~cl-------dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew 83 (447)
T KOG4497|consen 13 FCSFSP-CGNYIASLSRY-RLVIRDSETLQLHQLFLCL-------DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEW 83 (447)
T ss_pred ceeECC-CCCeeeeeeee-EEEEeccchhhHHHHHHHH-------HHhhheeeeccceeeeeeeeccceEEEEEeeccee
Confidence 367899 89999998865 7888898887766655543 35778889888664 55677889999999998888
Q ss_pred EEEeecccccEEEEEECCCCcEEEeee
Q psy17133 88 VHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
...+....+.+..++|+|||+.+...+
T Consensus 84 ~ckIdeg~agls~~~WSPdgrhiL~ts 110 (447)
T KOG4497|consen 84 YCKIDEGQAGLSSISWSPDGRHILLTS 110 (447)
T ss_pred EEEeccCCCcceeeeECCCcceEeeee
Confidence 888877778899999999998776554
No 241
>KOG0280|consensus
Probab=98.96 E-value=7.6e-08 Score=56.31 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=76.6
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~ 83 (116)
..++.|++ .+..++++..++.+.+-+...... +..++.| .-.+.-..|+-. ..++++|++|+.+..||++
T Consensus 124 ~lslD~~~-~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~H------e~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R 196 (339)
T KOG0280|consen 124 ALSLDIST-SGTKIFVSDSRGSISGVYETEMVLEKVQTWKVH------EFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIR 196 (339)
T ss_pred eeEEEeec-cCceEEEEcCCCcEEEEecceeeeeeccccccc------ceeeeeeecccCCCceEEecCCCceEEEEEec
Confidence 45778888 778888888889888555443433 3467777 556777777754 4689999999999999998
Q ss_pred -CCeEEEE-eecccccEEEEEECC-CCcEEEeeecC
Q psy17133 84 -SGKLVHS-MVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 84 -~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
.++.+.. .+.|...|.++.-+| .+.+++||+.|
T Consensus 197 ~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYD 232 (339)
T KOG0280|consen 197 IPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYD 232 (339)
T ss_pred CCcceeeecceeeecceEEEecCCCCCceEEEeccc
Confidence 4444433 445778888888776 57799999876
No 242
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.96 E-value=1.3e-07 Score=59.22 Aligned_cols=99 Identities=11% Similarity=0.095 Sum_probs=64.7
Q ss_pred ceEEEEccCCCcEEEEee-CCCe--EEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---CeEEE
Q psy17133 7 PTSIDFVRDESTKMVTAF-DNSA--CVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---RHIRF 79 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~-~~~~--v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~~ 79 (116)
.....|+| +++.|+..+ .++. ++++++.. +.....+... ...+....|+|||+.++....+ ..|.+
T Consensus 283 ~~~p~wSP-DG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~------~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v 355 (428)
T PRK01029 283 QGNPSFSP-DGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKK------YRNSSCPAWSPDGKKIAFCSVIKGVRQICV 355 (428)
T ss_pred cCCeEECC-CCCEEEEEECCCCCceEEEEECcccccceEEeccC------CCCccceeECCCCCEEEEEEcCCCCcEEEE
Confidence 45679999 777766554 4554 55555542 2333444333 2346778999999988765442 47999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
||+.+++...... ....+....|+|||+.|+..
T Consensus 356 ~dl~~g~~~~Lt~-~~~~~~~p~wSpDG~~L~f~ 388 (428)
T PRK01029 356 YDLATGRDYQLTT-SPENKESPSWAIDSLHLVYS 388 (428)
T ss_pred EECCCCCeEEccC-CCCCccceEECCCCCEEEEE
Confidence 9999887654433 23456778999999988743
No 243
>KOG2695|consensus
Probab=98.93 E-value=5.7e-09 Score=62.14 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=68.9
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce---eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP---VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.|.+.|+++.-...+.++|.+.+.+++|.+||.+.-+. +..+++|.. .....-+.+++.+..++++++|...+
T Consensus 296 yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN----~~a~l~~~v~~eeg~I~s~GdDcytR 371 (425)
T KOG2695|consen 296 YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVN----LSAYLPAHVKEEEGSIFSVGDDCYTR 371 (425)
T ss_pred EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccc----cccccccccccccceEEEccCeeEEE
Confidence 57778888776543568899999999999999985444 788888854 34445566677778888999999999
Q ss_pred EEECCCCeEEEEee
Q psy17133 79 FFDNVSGKLVHSMV 92 (116)
Q Consensus 79 ~~~~~~~~~~~~~~ 92 (116)
+|.++.|.++.++.
T Consensus 372 iWsl~~ghLl~tip 385 (425)
T KOG2695|consen 372 IWSLDSGHLLCTIP 385 (425)
T ss_pred EEecccCceeeccC
Confidence 99999999888765
No 244
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.91 E-value=2.2e-07 Score=57.81 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=67.0
Q ss_pred CCceEEEEccCCCcEEEE-eeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---CeEE
Q psy17133 5 GTPTSIDFVRDESTKMVT-AFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---RHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~-~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~ 78 (116)
+.+.++.|+| +++.++. .+.+ ..+++|++.+++. ..+..+ ........|+|+++.++..+.. ..|.
T Consensus 234 ~~~~~~~~sp-Dg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~------~~~~~~~~~s~dg~~l~~~s~~~g~~~iy 305 (417)
T TIGR02800 234 GMNGAPAFSP-DGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNG------PGIDTEPSWSPDGKSIAFTSDRGGSPQIY 305 (417)
T ss_pred CCccceEECC-CCCEEEEEECCCCCccEEEEECCCCCE-EECCCC------CCCCCCEEECCCCCEEEEEECCCCCceEE
Confidence 4456789999 6666654 4433 4688899886653 333333 2234567899999987765543 2688
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
++++.+++... +..+......+.|+|++++++.++.
T Consensus 306 ~~d~~~~~~~~-l~~~~~~~~~~~~spdg~~i~~~~~ 341 (417)
T TIGR02800 306 MMDADGGEVRR-LTFRGGYNASPSWSPDGDLIAFVHR 341 (417)
T ss_pred EEECCCCCEEE-eecCCCCccCeEECCCCCEEEEEEc
Confidence 88887766543 3334445677899999998887654
No 245
>KOG0280|consensus
Probab=98.89 E-value=5.6e-08 Score=56.86 Aligned_cols=98 Identities=16% Similarity=0.158 Sum_probs=71.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEE-EecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVR-IDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~ 79 (116)
|+-+.....|+..+.+.+.+|++|+.+..||++ .++.+.. .+.| ...|.++.-+| .+.++++|+-|-.|++
T Consensus 164 He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH------~~GV~SI~ss~~~~~~I~TGsYDe~i~~ 237 (339)
T KOG0280|consen 164 HEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVH------TSGVVSIYSSPPKPTYIATGSYDECIRV 237 (339)
T ss_pred cceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceee------ecceEEEecCCCCCceEEEeccccceee
Confidence 444556677877677899999999999999998 3333332 3344 56788888776 4779999999999999
Q ss_pred EECCC-CeEEEEeecccccEEEEEECCCC
Q psy17133 80 FDNVS-GKLVHSMVAHLDAVTSLAVDPQG 107 (116)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~ 107 (116)
||.++ ++++..-. ..+.|..++++|.-
T Consensus 238 ~DtRnm~kPl~~~~-v~GGVWRi~~~p~~ 265 (339)
T KOG0280|consen 238 LDTRNMGKPLFKAK-VGGGVWRIKHHPEI 265 (339)
T ss_pred eehhcccCccccCc-cccceEEEEecchh
Confidence 99884 44444333 34678999988853
No 246
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.88 E-value=1.3e-06 Score=53.31 Aligned_cols=111 Identities=17% Similarity=0.284 Sum_probs=70.0
Q ss_pred CCCceEEEEccCCCcEEEEe-eCCCeEEEEECC--CCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeE
Q psy17133 4 NGTPTSIDFVRDESTKMVTA-FDNSACVLFDLE--TGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHI 77 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~--~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i 77 (116)
...+..+.|+| +++++.+. -.+..|.++++. +++. +..+...............+.++||+++++++. ..+.|
T Consensus 191 G~GPRh~~f~p-dg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI 269 (345)
T PF10282_consen 191 GSGPRHLAFSP-DGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSI 269 (345)
T ss_dssp TSSEEEEEE-T-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEE
T ss_pred CCCCcEEEEcC-CcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEE
Confidence 34578899999 66766555 457889998887 4422 222222110001122578899999999887765 47899
Q ss_pred EEEECC--CCeE--EEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 78 RFFDNV--SGKL--VHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 78 ~~~~~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.+|++. ++++ +..+.......+.++++|+|++|++++.
T Consensus 270 ~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~ 311 (345)
T PF10282_consen 270 SVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQ 311 (345)
T ss_dssp EEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEET
T ss_pred EEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEec
Confidence 999983 3443 3333333445899999999999998764
No 247
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.88 E-value=1.1e-08 Score=42.58 Aligned_cols=31 Identities=10% Similarity=0.153 Sum_probs=28.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFD 33 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~ 33 (116)
.|.+.|.+++|+| ++.++++++.|+.|++||
T Consensus 9 ~h~~~i~~i~~~~-~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 9 GHSSSINSIAWSP-DGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SSSSSEEEEEEET-TSSEEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEEec-ccccceeeCCCCEEEEEC
Confidence 3789999999999 789999999999999997
No 248
>KOG4640|consensus
Probab=98.87 E-value=5.7e-08 Score=61.81 Aligned_cols=93 Identities=14% Similarity=0.137 Sum_probs=74.5
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCce-eEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGI-NRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
..+.-+.|+| .-..++.+...|.+.+..++ .+.+..++.+. ..+ .+++|.|||++++.|-.||+|++.|.+
T Consensus 21 ~~i~~~ewnP-~~dLiA~~t~~gelli~R~n-~qRlwtip~p~------~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve 92 (665)
T KOG4640|consen 21 INIKRIEWNP-KMDLIATRTEKGELLIHRLN-WQRLWTIPIPG------ENVTASLCWRPDGKLLAVGFKDGTIRLHDVE 92 (665)
T ss_pred cceEEEEEcC-ccchhheeccCCcEEEEEec-cceeEeccCCC------CccceeeeecCCCCEEEEEecCCeEEEEEcc
Confidence 3467789999 88999999999999999988 77778887552 234 599999999999999999999999999
Q ss_pred CCeEEEEee-cccccEEEEEECC
Q psy17133 84 SGKLVHSMV-AHLDAVTSLAVDP 105 (116)
Q Consensus 84 ~~~~~~~~~-~~~~~v~~~~~~~ 105 (116)
++..+.... .....+..+-|++
T Consensus 93 ~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 93 KGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred CCCceeccccccccchheeeccc
Confidence 988877632 2344677777753
No 249
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.84 E-value=4.9e-07 Score=57.00 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=64.0
Q ss_pred ceEEEEccCCCcEEEE-eeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C--CeEEEE
Q psy17133 7 PTSIDFVRDESTKMVT-AFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D--RHIRFF 80 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~-~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d--~~i~~~ 80 (116)
.....|+| +++.|+. ...++ .|+++|+.+++. ..+..+ ........|+||++.++..+. + ..|.++
T Consensus 264 ~~~~~wSP-DG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~------~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~ 335 (448)
T PRK04792 264 NGAPRFSP-DGKKLALVLSKDGQPEIYVVDIATKAL-TRITRH------RAIDTEPSWHPDGKSLIFTSERGGKPQIYRV 335 (448)
T ss_pred cCCeeECC-CCCEEEEEEeCCCCeEEEEEECCCCCe-EECccC------CCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence 45678999 6776654 44455 478888876654 334333 234567889999997766554 3 357777
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++.+++...... ........+|+|||++|+..+
T Consensus 336 dl~~g~~~~Lt~-~g~~~~~~~~SpDG~~l~~~~ 368 (448)
T PRK04792 336 NLASGKVSRLTF-EGEQNLGGSITPDGRSMIMVN 368 (448)
T ss_pred ECCCCCEEEEec-CCCCCcCeeECCCCCEEEEEE
Confidence 887776544321 222234578999999887654
No 250
>KOG1517|consensus
Probab=98.82 E-value=3.5e-08 Score=66.16 Aligned_cols=109 Identities=17% Similarity=0.296 Sum_probs=78.3
Q ss_pred CCCC--ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 3 YNGT--PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~--v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
|+.. |..+.+.+.+-..|++++.+|.|++||++...... .+..+..+ .+..+++.++++.+++++|+. ..|+
T Consensus 1253 h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~y---Gs~lTal~VH~hapiiAsGs~-q~ik 1328 (1387)
T KOG1517|consen 1253 HNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEY---GSALTALTVHEHAPIIASGSA-QLIK 1328 (1387)
T ss_pred cCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecccc---CccceeeeeccCCCeeeecCc-ceEE
Confidence 4444 88899988333469999999999999998532222 22222110 235899999999999999988 9999
Q ss_pred EEECCCCeEEEEee-------cccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGKLVHSMV-------AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||++. |+.+..++ ...+.+.+++|+|-...++.|+.|
T Consensus 1329 Iy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~D 1372 (1387)
T KOG1517|consen 1329 IYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSAD 1372 (1387)
T ss_pred EEecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCC
Confidence 99986 55444433 234567999999998888887665
No 251
>KOG1240|consensus
Probab=98.80 E-value=5.3e-07 Score=61.47 Aligned_cols=57 Identities=11% Similarity=0.054 Sum_probs=45.8
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cccccEEEEEECCCC
Q psy17133 51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVDPQG 107 (116)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 107 (116)
...+.|++++.+|.+.+++.|...|.+.+||++-+..+..+. ++..+++.+..+|..
T Consensus 1193 ~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~ 1250 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTY 1250 (1431)
T ss_pred ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccC
Confidence 344678999999999999999999999999999888877665 344577777776643
No 252
>KOG1334|consensus
Probab=98.79 E-value=1.4e-08 Score=62.76 Aligned_cols=107 Identities=17% Similarity=0.293 Sum_probs=81.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECC--CC----------ceeEE-EecCCcCcCCCCceeEEEE-cCCCCEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLE--TG----------KPVVR-IDSSQFGVSGGGGINRVVC-HPTLPLTIT 70 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~----------~~~~~-~~~~~~~~~~~~~i~~~~~-~~~~~~~~~ 70 (116)
-.|+++.|+. ++.-|+++..+..|+++... .| ..+.. +++|.. ...|..+-| -|...++++
T Consensus 337 v~ITgl~Ysh-~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN----~~TVKgVNFfGPrsEyVvS 411 (559)
T KOG1334|consen 337 VNITGLVYSH-DGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRN----SRTVKGVNFFGPRSEYVVS 411 (559)
T ss_pred ccceeEEecC-CccceeeeecccceEEeccccccCCCCCCCcchhhccchhhccccc----ccccceeeeccCccceEEe
Confidence 3589999998 66667777778889998543 23 22233 677754 345767655 488889999
Q ss_pred EeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 71 AHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 71 ~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++-|.|.+|+=.+++.++.+.+...-|.++.-+|--..||+.+-|
T Consensus 412 GSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid 457 (559)
T KOG1334|consen 412 GSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGID 457 (559)
T ss_pred cCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCc
Confidence 9999999999999999888888777778888888888888887654
No 253
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.79 E-value=6.2e-07 Score=56.23 Aligned_cols=103 Identities=18% Similarity=0.165 Sum_probs=59.4
Q ss_pred CCceEEEEccCCCcEEEEeeC-----CCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFD-----NSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDR 75 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~-----~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~ 75 (116)
+......|+| +|+.|+..+. +..+..|++..+ +........ ........|+|||+.++..+ .++
T Consensus 231 g~~~~p~wSP-DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~------~~~~~~p~wSPDG~~Laf~s~~~g 303 (428)
T PRK01029 231 GNQLMPTFSP-RKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEA------FGTQGNPSFSPDGTRLVFVSNKDG 303 (428)
T ss_pred CCccceEECC-CCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCC------CCCcCCeEECCCCCEEEEEECCCC
Confidence 3445678999 7777765442 223344666542 222222222 12345679999999777655 355
Q ss_pred e--EEEEECCC-CeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 76 H--IRFFDNVS-GKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 76 ~--i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
. |.++++.. +.....+......+....|+|||+.|+..+
T Consensus 304 ~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~ 345 (428)
T PRK01029 304 RPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCS 345 (428)
T ss_pred CceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEE
Confidence 4 44445432 222333433444567889999999887654
No 254
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.79 E-value=2.2e-06 Score=53.66 Aligned_cols=101 Identities=11% Similarity=0.022 Sum_probs=65.6
Q ss_pred CCceEEEEccCCCcE-EEEee-C--CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeC--CCeE
Q psy17133 5 GTPTSIDFVRDESTK-MVTAF-D--NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHD--DRHI 77 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~-l~~~~-~--~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~--d~~i 77 (116)
+......|+| +++. ++..+ . ...|+++|+.+++...... . .+......|+|||+.++. .+. +..|
T Consensus 188 ~~~~~p~wSp-DG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~------~g~~~~~~~SPDG~~la~~~~~~g~~~I 259 (419)
T PRK04043 188 GLNIFPKWAN-KEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-S------QGMLVVSDVSKDGSKLLLTMAPKGQPDI 259 (419)
T ss_pred CCeEeEEECC-CCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-C------CCcEEeeEECCCCCEEEEEEccCCCcEE
Confidence 3456789999 6663 55433 2 4679999998776544433 2 244566789999986654 333 4578
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.++++.+++..+ +...........|+|||+.|+-.+
T Consensus 260 y~~dl~~g~~~~-LT~~~~~d~~p~~SPDG~~I~F~S 295 (419)
T PRK04043 260 YLYDTNTKTLTQ-ITNYPGIDVNGNFVEDDKRIVFVS 295 (419)
T ss_pred EEEECCCCcEEE-cccCCCccCccEECCCCCEEEEEE
Confidence 888988776544 332333334568999999887554
No 255
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.79 E-value=1.1e-06 Score=55.14 Aligned_cols=100 Identities=8% Similarity=0.002 Sum_probs=64.8
Q ss_pred CceEEEEccCCCcEEEE-eeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C--CeEEE
Q psy17133 6 TPTSIDFVRDESTKMVT-AFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D--RHIRF 79 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~-~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d--~~i~~ 79 (116)
.+....|+| +++.++. ...++ .++++|+.+++. ..+..+ ........|+|+++.++..+. + ..|.+
T Consensus 244 ~~~~~~~Sp-DG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~------~~~~~~~~~spDg~~i~f~s~~~g~~~iy~ 315 (430)
T PRK00178 244 LNGAPAWSP-DGSKLAFVLSKDGNPEIYVMDLASRQL-SRVTNH------PAIDTEPFWGKDGRTLYFTSDRGGKPQIYK 315 (430)
T ss_pred CcCCeEECC-CCCEEEEEEccCCCceEEEEECCCCCe-EEcccC------CCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence 345689999 6776664 44343 688889987654 334433 234566789999987766554 3 36788
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+++.+++..+... .........|+|++++++..+
T Consensus 316 ~d~~~g~~~~lt~-~~~~~~~~~~Spdg~~i~~~~ 349 (430)
T PRK00178 316 VNVNGGRAERVTF-VGNYNARPRLSADGKTLVMVH 349 (430)
T ss_pred EECCCCCEEEeec-CCCCccceEECCCCCEEEEEE
Confidence 8887776544322 122234578999999987654
No 256
>KOG2315|consensus
Probab=98.78 E-value=7.9e-08 Score=60.27 Aligned_cols=92 Identities=15% Similarity=0.217 Sum_probs=67.6
Q ss_pred CCCCceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------ 73 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------ 73 (116)
.+++-.++-|+| .|++++.++ ..|.+-+||+.+.+.+..++.. ..+-..|+|||++++++..
T Consensus 310 ~egpRN~~~fnp-~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~--------~tt~~eW~PdGe~flTATTaPRlrv 380 (566)
T KOG2315|consen 310 PEGPRNTAFFNP-HGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA--------NTTVFEWSPDGEYFLTATTAPRLRV 380 (566)
T ss_pred CCCCccceEECC-CCCEEEEeecCCCCCceEEEeccchhhccccccC--------CceEEEEcCCCcEEEEEeccccEEe
Confidence 467778899999 778776654 4688999999998888888766 3577899999999988764
Q ss_pred CCeEEEEECCCCeEEEEeecccccEEEEEECC
Q psy17133 74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP 105 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 105 (116)
|+-++||+.. |..+....-. .....+.|-|
T Consensus 381 dNg~Kiwhyt-G~~l~~~~f~-sEL~qv~W~P 410 (566)
T KOG2315|consen 381 DNGIKIWHYT-GSLLHEKMFK-SELLQVEWRP 410 (566)
T ss_pred cCCeEEEEec-Cceeehhhhh-HhHhheeeee
Confidence 6889999975 6655433211 1455566654
No 257
>KOG1538|consensus
Probab=98.75 E-value=1.2e-06 Score=56.94 Aligned_cols=106 Identities=12% Similarity=0.134 Sum_probs=83.3
Q ss_pred CCCCceEEEEccCCC----cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDES----TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~----~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.+++|.+++|+|..+ +.+++..-+.++.++.+. |+.+..-+.- .-...++.+.++|.++..|+.|+.+.
T Consensus 175 ~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L------~FdP~CisYf~NGEy~LiGGsdk~L~ 247 (1081)
T KOG1538|consen 175 SNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRAL------NFDPCCISYFTNGEYILLGGSDKQLS 247 (1081)
T ss_pred CCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccC------CCCchhheeccCCcEEEEccCCCceE
Confidence 467899999998532 456777777788888875 5555433332 23467899999999999999999999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|. +.|..+.+.......|+.+...|++++++.|+.|
T Consensus 248 ~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqD 284 (1081)
T KOG1538|consen 248 LFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQD 284 (1081)
T ss_pred EEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEcc
Confidence 998 4588888877778899999999999999998876
No 258
>KOG1334|consensus
Probab=98.73 E-value=1.7e-07 Score=58.18 Aligned_cols=114 Identities=17% Similarity=0.276 Sum_probs=82.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCc------------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGV------------------------------ 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~------------------------------ 50 (116)
.|.|.|..+.|+. .|..+++++.+.++.+||...+++...+. +|...+
T Consensus 140 ~H~GcVntV~FN~-~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~ 218 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQ-RGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILE 218 (559)
T ss_pred CCCCccceeeecc-cCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeecc
Confidence 4789999999998 89999999999999999998776655443 222111
Q ss_pred -----------CCCCceeEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEee---cccc---cEEEEEECCCCc-EEE
Q psy17133 51 -----------SGGGGINRVVCHPTL-PLTITAHDDRHIRFFDNVSGKLVHSMV---AHLD---AVTSLAVDPQGL-YIL 111 (116)
Q Consensus 51 -----------~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~---~~~~---~v~~~~~~~~~~-~l~ 111 (116)
.|.+.+..++..|+. ..+.++++|+.+.-+|+.++.....+. .+.. ....++.+|-.. .++
T Consensus 219 t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~fa 298 (559)
T KOG1334|consen 219 TGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFA 298 (559)
T ss_pred ccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccc
Confidence 567778888888874 577889999999999988765443332 2222 456778888544 677
Q ss_pred eeecC
Q psy17133 112 SGTYQ 116 (116)
Q Consensus 112 ~~s~d 116 (116)
+++.|
T Consensus 299 VgG~d 303 (559)
T KOG1334|consen 299 VGGSD 303 (559)
T ss_pred cCChh
Confidence 76654
No 259
>KOG2314|consensus
Probab=98.72 E-value=4.9e-07 Score=57.20 Aligned_cols=103 Identities=12% Similarity=0.074 Sum_probs=75.4
Q ss_pred CCCceEEEEccCCCcEEEEee-----------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133 4 NGTPTSIDFVRDESTKMVTAF-----------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH 72 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~-----------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (116)
...|.-+.||| +.++|++=+ ...++.|||+.+|...+.|..-... ...-.-+.|+.|++++|...
T Consensus 249 Hp~Vq~idfSP-~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~---~~~WP~frWS~DdKy~Arm~ 324 (698)
T KOG2314|consen 249 HPGVQFIDFSP-NEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSP---YLKWPIFRWSHDDKYFARMT 324 (698)
T ss_pred CCCceeeecCC-ccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCC---ccccceEEeccCCceeEEec
Confidence 34578899999 778888743 2267999999999988888763210 12345678999999998876
Q ss_pred CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
. ..|.+|+..+-.++..-...-..|..+.|+|.++.||
T Consensus 325 ~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llA 362 (698)
T KOG2314|consen 325 G-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLA 362 (698)
T ss_pred c-ceEEEEecCceeeecccccCCccccCcccCCCcceEE
Confidence 5 6899999876554433333445789999999988876
No 260
>KOG1517|consensus
Probab=98.69 E-value=6.4e-07 Score=60.49 Aligned_cols=106 Identities=17% Similarity=0.143 Sum_probs=76.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFF 80 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~ 80 (116)
..|+++.-+...++.+++|..||.+++||.+... .+...+.|.. ...|..+.+.+.|- .+++++.+|.|.+|
T Consensus 1209 t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~----~~~Iv~~slq~~G~~elvSgs~~G~I~~~ 1284 (1387)
T KOG1517|consen 1209 TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHND----VEPIVHLSLQRQGLGELVSGSQDGDIQLL 1284 (1387)
T ss_pred ccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCC----cccceeEEeecCCCcceeeeccCCeEEEE
Confidence 3466666555468999999999999999987432 3555666632 22388888888765 59999999999999
Q ss_pred ECCCCeEEEE--eeccc--c-cEEEEEECCCCcEEEeee
Q psy17133 81 DNVSGKLVHS--MVAHL--D-AVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 81 ~~~~~~~~~~--~~~~~--~-~v~~~~~~~~~~~l~~~s 114 (116)
|++....... ...|. + ..+++..+++...+|+|+
T Consensus 1285 DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs 1323 (1387)
T KOG1517|consen 1285 DLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGS 1323 (1387)
T ss_pred ecccCcccccceeeeccccCccceeeeeccCCCeeeecC
Confidence 9985322221 11221 3 488999999999999987
No 261
>KOG0644|consensus
Probab=98.65 E-value=1.7e-08 Score=66.13 Aligned_cols=71 Identities=20% Similarity=0.345 Sum_probs=63.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|+.++.+. +..++++++.|..|++|.+.++.++..+.+| ++.|++++|+|-. +.+.||++++||
T Consensus 230 Ghs~ditdlavs~-~n~~iaaaS~D~vIrvWrl~~~~pvsvLrgh------tgavtaiafsP~~----sss~dgt~~~wd 298 (1113)
T KOG0644|consen 230 GHSGDITDLAVSS-NNTMIAAASNDKVIRVWRLPDGAPVSVLRGH------TGAVTAIAFSPRA----SSSDDGTCRIWD 298 (1113)
T ss_pred CCccccchhccch-hhhhhhhcccCceEEEEecCCCchHHHHhcc------ccceeeeccCccc----cCCCCCceEecc
Confidence 3788899999887 6678899999999999999999999999999 7899999999965 677899999999
Q ss_pred CC
Q psy17133 82 NV 83 (116)
Q Consensus 82 ~~ 83 (116)
.+
T Consensus 299 ~r 300 (1113)
T KOG0644|consen 299 AR 300 (1113)
T ss_pred cc
Confidence 76
No 262
>KOG2321|consensus
Probab=98.63 E-value=8.1e-07 Score=56.42 Aligned_cols=100 Identities=21% Similarity=0.310 Sum_probs=76.9
Q ss_pred EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy17133 9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV 88 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 88 (116)
++.++.....++++|+ ...|+-++++.|..+..|... .+.++.+.+++-..++++|+.+|.+..||.+.....
T Consensus 138 Dm~y~~~scDly~~gs-g~evYRlNLEqGrfL~P~~~~------~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv 210 (703)
T KOG2321|consen 138 DMKYHKPSCDLYLVGS-GSEVYRLNLEQGRFLNPFETD------SGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRV 210 (703)
T ss_pred cccccCCCccEEEeec-CcceEEEEccccccccccccc------cccceeeeecCccceEEecccCceEEEecchhhhhh
Confidence 4455432445555554 557899999999999988877 578999999999889999999999999999877655
Q ss_pred EEeec------cc-----ccEEEEEECCCCcEEEeeec
Q psy17133 89 HSMVA------HL-----DAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 89 ~~~~~------~~-----~~v~~~~~~~~~~~l~~~s~ 115 (116)
..+.. +. ..|+++.|+.+|-.++.|+.
T Consensus 211 ~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts 248 (703)
T KOG2321|consen 211 GTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTS 248 (703)
T ss_pred eeeecccccCCCccccccCcceEEEecCCceeEEeecc
Confidence 55431 22 24899999999998887764
No 263
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.62 E-value=7.5e-06 Score=50.07 Aligned_cols=80 Identities=13% Similarity=0.014 Sum_probs=61.4
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC----------CCeEEEEECCCCeEEEEeeccc-
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD----------DRHIRFFDNVSGKLVHSMVAHL- 95 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------d~~i~~~~~~~~~~~~~~~~~~- 95 (116)
+.+.+.|..+++.+..+.... ....+ ++||++.++.+.. +..|.+||..+.+.+..+....
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~-------~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~ 98 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGF-------LPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEG 98 (352)
T ss_pred ceEEEEECCCCEEEEEEEccC-------CCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCC
Confidence 799999999999888887552 22334 9999998776654 7899999999999988776321
Q ss_pred ------ccEEEEEECCCCcEEEeee
Q psy17133 96 ------DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 96 ------~~v~~~~~~~~~~~l~~~s 114 (116)
.....++++|||++|+...
T Consensus 99 p~~~~~~~~~~~~ls~dgk~l~V~n 123 (352)
T TIGR02658 99 PRFLVGTYPWMTSLTPDNKTLLFYQ 123 (352)
T ss_pred chhhccCccceEEECCCCCEEEEec
Confidence 1234789999999988654
No 264
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.61 E-value=3.3e-06 Score=49.40 Aligned_cols=44 Identities=18% Similarity=0.160 Sum_probs=34.6
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD 96 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 96 (116)
...|..+.++|||.++++...+|.|.+|++.+-+..+.+..++.
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eq 272 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQ 272 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhhC
Confidence 44577888999999999999999999999887777666654433
No 265
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.60 E-value=7.3e-06 Score=52.14 Aligned_cols=106 Identities=14% Similarity=0.224 Sum_probs=67.7
Q ss_pred CCceEEEEccCCCcEEEEe----eCCCe----EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 5 GTPTSIDFVRDESTKMVTA----FDNSA----CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~----~~~~~----v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
..+.++.|+..+++.+.+- +.++. -.+|+...++. ...... ....++.+.+.+++|++..++.|+.||.
T Consensus 206 ~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~kl-qrvsvt--sipL~s~v~~ca~sp~E~kLvlGC~DgS 282 (545)
T PF11768_consen 206 NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKL-QRVSVT--SIPLPSQVICCARSPSEDKLVLGCEDGS 282 (545)
T ss_pred CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCce-eEEEEE--EEecCCcceEEecCcccceEEEEecCCe
Confidence 3456677776455555543 22333 23555543322 111100 0011467899999999999999999999
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
|.+||...+..... ...-.+..++|+|+|..+++|+.
T Consensus 283 iiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~ 319 (545)
T PF11768_consen 283 IILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSE 319 (545)
T ss_pred EEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcC
Confidence 99999876543322 23445788999999999998874
No 266
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.57 E-value=1.8e-05 Score=54.81 Aligned_cols=108 Identities=16% Similarity=0.197 Sum_probs=70.9
Q ss_pred CceEEEEccCCCc-EEEEeeCCCeEEEEECCCCceeEEEecCC------------cC---cCCCCceeEEEEcCCCCEEE
Q psy17133 6 TPTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQ------------FG---VSGGGGINRVVCHPTLPLTI 69 (116)
Q Consensus 6 ~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~------------~~---~~~~~~i~~~~~~~~~~~~~ 69 (116)
.+..++++| +++ ++++...++.|++||+.++.......+.. .. ...-.....++++++|.+++
T Consensus 741 ~P~GIavsp-dG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYV 819 (1057)
T PLN02919 741 QPSGISLSP-DLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYV 819 (1057)
T ss_pred CccEEEEeC-CCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEE
Confidence 456799999 555 55566678999999998765321111000 00 00011346889999999888
Q ss_pred EEeCCCeEEEEECCCCeEEEEeec-------------ccccEEEEEECCCCcEEEeee
Q psy17133 70 TAHDDRHIRFFDNVSGKLVHSMVA-------------HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 70 ~~~~d~~i~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~s 114 (116)
+-..++.|++||..++........ .-.....++++++|+.+++-+
T Consensus 820 ADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt 877 (1057)
T PLN02919 820 ADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADT 877 (1057)
T ss_pred EECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEEC
Confidence 888899999999987766543210 112567899999998776644
No 267
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.54 E-value=2.6e-05 Score=45.49 Aligned_cols=103 Identities=21% Similarity=0.225 Sum_probs=71.3
Q ss_pred CCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCce----eEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 5 GTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKP----VVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~----~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.....++|+| +++.| ++-+..+.|..+++..... ...+ ..... .+....+++..+|.+.++....+.|.
T Consensus 134 ~~pNGi~~s~-dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~g~pDG~~vD~~G~l~va~~~~~~I~ 208 (246)
T PF08450_consen 134 GFPNGIAFSP-DGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGG----PGYPDGLAVDSDGNLWVADWGGGRIV 208 (246)
T ss_dssp SSEEEEEEET-TSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSS----SCEEEEEEEBTTS-EEEEEETTTEEE
T ss_pred ccccceEECC-cchheeecccccceeEEEeccccccceeeeeeEEEcCCC----CcCCCcceEcCCCCEEEEEcCCCEEE
Confidence 3467899999 66655 4566788899998853221 1222 22210 23478899999999888888899999
Q ss_pred EEECCCCeEEEEeecccccEEEEEE-CCCCcEEEee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAV-DPQGLYILSG 113 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~ 113 (116)
+++.+ |+.+..+......+++++| -++.+.|+..
T Consensus 209 ~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 209 VFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVT 243 (246)
T ss_dssp EEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEE
T ss_pred EECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEE
Confidence 99987 8888887755568999999 4676665543
No 268
>KOG2695|consensus
Probab=98.53 E-value=3e-07 Score=55.06 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=71.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----eeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----PVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~ 78 (116)
+.|.++.|.. .++.+..|..++.|..+|++.+. +...+ -| .+.++++..-. ++.++.+.+.+|+|+
T Consensus 253 sDVfAlQf~~-s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh------~Ssvtslq~Lq~s~q~LmaS~M~gkik 324 (425)
T KOG2695|consen 253 SDVFALQFAG-SDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YH------DSSVTSLQILQFSQQKLMASDMTGKIK 324 (425)
T ss_pred hhHHHHHhcc-cCCeeEecccCCcEEEEEeeecccCCCcceEEE-Ec------CcchhhhhhhccccceEeeccCcCcee
Confidence 4567778876 66899999999999999998542 22222 23 45688877665 678888889999999
Q ss_pred EEECCCCeE---EEEeecccccE--EEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGKL---VHSMVAHLDAV--TSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~~---~~~~~~~~~~v--~~~~~~~~~~~l~~~s~d 116 (116)
+||.+--+. +.++.+|...- .-+-..+....+++++.|
T Consensus 325 LyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdD 367 (425)
T KOG2695|consen 325 LYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDD 367 (425)
T ss_pred EeeehhhhcccceeeeecccccccccccccccccceEEEccCe
Confidence 999875444 77777764322 122234555566666655
No 269
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.53 E-value=3.5e-05 Score=46.52 Aligned_cols=104 Identities=16% Similarity=0.346 Sum_probs=70.4
Q ss_pred ceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEECCC
Q psy17133 7 PTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDNVS 84 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~~~ 84 (116)
+-...+.| +++++++.. ...++.+|++.+++....-.... .......-+.|+|++++.+..++ +++|.+|....
T Consensus 147 ~H~a~~tP-~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v---~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 147 VHSANFTP-DGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV---KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred cceeeeCC-CCCEEEEeecCCceEEEEEcccCcccccccccc---CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence 66778899 778887775 35689999998775432211110 01346788999999999887766 89999999876
Q ss_pred --CeE--EEEee------cccccEEEEEECCCCcEEEeee
Q psy17133 85 --GKL--VHSMV------AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 85 --~~~--~~~~~------~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++. ++.+. ........+..++||++|....
T Consensus 223 ~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasN 262 (346)
T COG2706 223 AVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASN 262 (346)
T ss_pred CCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEec
Confidence 322 22221 1233567788899999997653
No 270
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.52 E-value=1.7e-05 Score=48.56 Aligned_cols=80 Identities=13% Similarity=0.041 Sum_probs=58.8
Q ss_pred EccCCCcEEEEe-e---------CCCeEEEEECCCCceeEEEecCCc-CcCCCCceeEEEEcCCCCEEEEEe-C-CCeEE
Q psy17133 12 FVRDESTKMVTA-F---------DNSACVLFDLETGKPVVRIDSSQF-GVSGGGGINRVVCHPTLPLTITAH-D-DRHIR 78 (116)
Q Consensus 12 ~~~~~~~~l~~~-~---------~~~~v~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~-~-d~~i~ 78 (116)
++| +++.++++ + .+..|.+||..+.+.+.++..... -.........++++|||++++... . ++.+.
T Consensus 53 ~sp-Dg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~ 131 (352)
T TIGR02658 53 VAS-DGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG 131 (352)
T ss_pred ECC-CCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence 899 55655544 4 578999999999999988874311 000012345789999999988766 3 78999
Q ss_pred EEECCCCeEEEEee
Q psy17133 79 FFDNVSGKLVHSMV 92 (116)
Q Consensus 79 ~~~~~~~~~~~~~~ 92 (116)
+.|+.+++.+..+.
T Consensus 132 VvD~~~~kvv~ei~ 145 (352)
T TIGR02658 132 VVDLEGKAFVRMMD 145 (352)
T ss_pred EEECCCCcEEEEEe
Confidence 99999999888775
No 271
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.50 E-value=3.1e-05 Score=46.36 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=74.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCe-EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-----CCeEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSA-CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-----DRHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----d~~i~ 78 (116)
.+.-.++.+|.....++.+-.-+. ..+||..+++....+..... ....---.|++||+++++.-+ .|.|-
T Consensus 5 ~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~g----RHFyGHg~fs~dG~~LytTEnd~~~g~G~Ig 80 (305)
T PF07433_consen 5 ARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPG----RHFYGHGVFSPDGRLLYTTENDYETGRGVIG 80 (305)
T ss_pred ccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCC----CEEecCEEEcCCCCEEEEeccccCCCcEEEE
Confidence 344567788855566666665544 67899999988877765421 112224679999999988654 47899
Q ss_pred EEECC-CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNV-SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+||.. +-+.+..+..+.-....+.+.|||+.|+.+.
T Consensus 81 Vyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVAN 117 (305)
T PF07433_consen 81 VYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVAN 117 (305)
T ss_pred EEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEc
Confidence 99998 5566667776655667788999998887653
No 272
>KOG2314|consensus
Probab=98.50 E-value=2.5e-06 Score=54.16 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=73.3
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-----------CCe
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-----------DRH 76 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------d~~ 76 (116)
+-+.||| .|.+|++-..- -|.+|--.+-.....|... .+..+.|+|..++|++-+. ...
T Consensus 214 tyv~wSP-~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~Hp--------~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~ 283 (698)
T KOG2314|consen 214 TYVRWSP-KGTYLVTFHKQ-GIALWGGESFDRIQRFYHP--------GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQ 283 (698)
T ss_pred eeEEecC-CceEEEEEecc-ceeeecCccHHHHHhccCC--------CceeeecCCccceEEEecCCccccCcccCCCce
Confidence 4578999 88999987754 4889987766667777544 5899999999999998542 257
Q ss_pred EEEEECCCCeEEEEeeccc---ccEEEEEECCCCcEEEeee
Q psy17133 77 IRFFDNVSGKLVHSMVAHL---DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~s 114 (116)
++|||+.+|...+.+.... ....-+.||.|++++|-..
T Consensus 284 l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~ 324 (698)
T KOG2314|consen 284 LIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMT 324 (698)
T ss_pred EEEEEccccchhcceeccCCCccccceEEeccCCceeEEec
Confidence 9999999999988876421 2223468999999998543
No 273
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.49 E-value=3.2e-05 Score=48.64 Aligned_cols=99 Identities=15% Similarity=0.095 Sum_probs=62.1
Q ss_pred CCceEEEEccCCCcEEEE-eeC--CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-C--eEE
Q psy17133 5 GTPTSIDFVRDESTKMVT-AFD--NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-R--HIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~-~~~--~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~--~i~ 78 (116)
+......|+| +++.++. .+. +..++++++.+++. ..+... ........|+|||+.++..++. + .|.
T Consensus 233 g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~------~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy 304 (419)
T PRK04043 233 GMLVVSDVSK-DGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNY------PGIDVNGNFVEDDKRIVFVSDRLGYPNIF 304 (419)
T ss_pred CcEEeeEECC-CCCEEEEEEccCCCcEEEEEECCCCcE-EEcccC------CCccCccEECCCCCEEEEEECCCCCceEE
Confidence 3345678999 6665544 333 45788889876653 344333 2223456799999877665542 2 688
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+.++.+++..+...... ....|+|+|+.|+..+
T Consensus 305 ~~dl~~g~~~rlt~~g~---~~~~~SPDG~~Ia~~~ 337 (419)
T PRK04043 305 MKKLNSGSVEQVVFHGK---NNSSVSTYKNYIVYSS 337 (419)
T ss_pred EEECCCCCeEeCccCCC---cCceECCCCCEEEEEE
Confidence 88888777655433211 2358999999887544
No 274
>KOG2041|consensus
Probab=98.45 E-value=3.1e-06 Score=55.53 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=79.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee---------------EEEecCCcCcCCCCceeEEEEcCCCC
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV---------------VRIDSSQFGVSGGGGINRVVCHPTLP 66 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (116)
+.+....++.|+. +..+++.|+.+|.+++.-+.+...- .++++| ...|.-+.|+.+..
T Consensus 12 PnnvkL~c~~WNk-e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH------~~sV~vvTWNe~~Q 84 (1189)
T KOG2041|consen 12 PNNVKLHCAEWNK-ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGH------NASVMVVTWNENNQ 84 (1189)
T ss_pred CCCceEEEEEEcc-cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccC------cceEEEEEeccccc
Confidence 4567788999998 8899999999999999877643211 123444 78899999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEee--cccccEEEEEECCCCcEEEe
Q psy17133 67 LTITAHDDRHIRFFDNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 67 ~~~~~~~d~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~ 112 (116)
.+-+...+|.|.+|-+-.|.....+. .....|.+|+|+.+|..+..
T Consensus 85 KLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcI 132 (1189)
T KOG2041|consen 85 KLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICI 132 (1189)
T ss_pred cccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEE
Confidence 99999999999999988775433222 24557889999999887654
No 275
>KOG4532|consensus
Probab=98.43 E-value=1.8e-05 Score=46.33 Aligned_cols=96 Identities=8% Similarity=0.016 Sum_probs=69.5
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEE-EecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVR-IDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+..+.+++ +++++++.++..+|..|.+.. ++.+.. ..... +..=.+..|+.....+|++..|+++.+||++.
T Consensus 161 ~ns~~~sn-d~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t-----~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~ 234 (344)
T KOG4532|consen 161 QNSLHYSN-DPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPT-----SDHGFYNSFSENDLQFAVVFQDGTCAIYDVRN 234 (344)
T ss_pred eeeeEEcC-CCceEEEecCCCcceEEEeCCccceeeeeEeccc-----CCCceeeeeccCcceEEEEecCCcEEEEEecc
Confidence 67788898 788998888889999998864 333333 22221 23346788888899999999999999999985
Q ss_pred CeEE-----EEeecccccEEEEEECCCCc
Q psy17133 85 GKLV-----HSMVAHLDAVTSLAVDPQGL 108 (116)
Q Consensus 85 ~~~~-----~~~~~~~~~v~~~~~~~~~~ 108 (116)
.... .+...|.+.++.+.|++-|.
T Consensus 235 ~~tpm~~~sstrp~hnGa~R~c~Fsl~g~ 263 (344)
T KOG4532|consen 235 MATPMAEISSTRPHHNGAFRVCRFSLYGL 263 (344)
T ss_pred cccchhhhcccCCCCCCceEEEEecCCCc
Confidence 4322 12235778899999997554
No 276
>KOG3621|consensus
Probab=98.42 E-value=3.3e-06 Score=54.73 Aligned_cols=105 Identities=12% Similarity=0.070 Sum_probs=74.7
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...+.--+++. .+++++.|+..|.+++|+--.++. ..++.... .+.+....++++..++|.++..+.|.++.+.
T Consensus 33 ~~~v~lTc~ds-t~~~l~~GsS~G~lyl~~R~~~~~-~~~~~~~~----~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~ 106 (726)
T KOG3621|consen 33 PARVKLTCVDA-TEEYLAMGSSAGSVYLYNRHTGEM-RKLKNEGA----TGITCVRSVSSVEYLVAAGTASGRVSVFQLN 106 (726)
T ss_pred cceEEEEEeec-CCceEEEecccceEEEEecCchhh-hcccccCc----cceEEEEEecchhHhhhhhcCCceEEeehhh
Confidence 33444444555 678999999999999999775543 33332111 4567778889999999999999999999887
Q ss_pred CCeEEEE-----e-ecccccEEEEEECCCCcEEEeee
Q psy17133 84 SGKLVHS-----M-VAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 84 ~~~~~~~-----~-~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.+..... . ..|...|++++|+++++.+++|-
T Consensus 107 ~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD 143 (726)
T KOG3621|consen 107 KELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGD 143 (726)
T ss_pred ccCCCcceeeccccccCCceEEEEEecccccEEeecC
Confidence 5432211 1 13567899999999999998864
No 277
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.40 E-value=2.6e-05 Score=53.39 Aligned_cols=108 Identities=15% Similarity=0.125 Sum_probs=70.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE------------------------EecCCcCc---------
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR------------------------IDSSQFGV--------- 50 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~------------------------~~~~~~~~--------- 50 (116)
...|.+++|+| +...++....++++.+.... ..++.+ |.|.....
T Consensus 120 d~GI~a~~WSP-D~Ella~vT~~~~l~~mt~~-fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~ 197 (928)
T PF04762_consen 120 DSGILAASWSP-DEELLALVTGEGNLLLMTRD-FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPT 197 (928)
T ss_pred cCcEEEEEECC-CcCEEEEEeCCCEEEEEecc-ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCC
Confidence 35789999999 77888888778787776532 222211 11111000
Q ss_pred ---------CCCCceeEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 51 ---------SGGGGINRVVCHPTLPLTITAHD------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 51 ---------~~~~~i~~~~~~~~~~~~~~~~~------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.....-..++|..||.++++.+- ...+++|+-+ |++......-.+--..++|.|.|+++|+..
T Consensus 198 ~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q 275 (928)
T PF04762_consen 198 VPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQ 275 (928)
T ss_pred CCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEE
Confidence 01123457899999999987653 2579999955 776555443444445789999999998764
No 278
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.37 E-value=0.00011 Score=45.06 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=69.0
Q ss_pred CCceEEEEccCCCcEEEEee-CCCeEEEEECCC-CceeEE---Ee--cC--CcCcCCCCceeEEEEcCCCCEEEEEe-CC
Q psy17133 5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLET-GKPVVR---ID--SS--QFGVSGGGGINRVVCHPTLPLTITAH-DD 74 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~~~~~---~~--~~--~~~~~~~~~i~~~~~~~~~~~~~~~~-~d 74 (116)
.....++++| ++++++++. .++.+.++++.. +..... +. +. ...........++.++|+++++++.. ..
T Consensus 87 ~~p~~i~~~~-~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~ 165 (345)
T PF10282_consen 87 SSPCHIAVDP-DGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA 165 (345)
T ss_dssp SCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT
T ss_pred CCcEEEEEec-CCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC
Confidence 3456788899 677777665 689999999976 432222 11 11 00011245688999999999777654 35
Q ss_pred CeEEEEECCCCe--EEE--Eee-cccccEEEEEECCCCcEEEeee
Q psy17133 75 RHIRFFDNVSGK--LVH--SMV-AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 75 ~~i~~~~~~~~~--~~~--~~~-~~~~~v~~~~~~~~~~~l~~~s 114 (116)
..|.+|++.... +.. .+. ......+.++|+|++++++...
T Consensus 166 D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~ 210 (345)
T PF10282_consen 166 DRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVN 210 (345)
T ss_dssp TEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEE
T ss_pred CEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEec
Confidence 689999987544 322 222 2345689999999999887654
No 279
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.35 E-value=5e-06 Score=33.30 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=31.2
Q ss_pred ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 38 KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
+....+..+ ...+.++.+.+++..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGH------TGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEec------CCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 344555555 56799999999999999999999999996
No 280
>KOG4714|consensus
Probab=98.34 E-value=5.8e-07 Score=52.05 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=58.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEEC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~ 82 (116)
..|.+++-+|...+.+++|+++|.+.+||.+... +...++.| ...+..+.|+|. +..++++++||.+..||-
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ah------k~~i~eV~FHpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAH------KAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHh------hhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence 3467777778556677888899999999998653 33445666 678999999996 679999999999999996
Q ss_pred CC
Q psy17133 83 VS 84 (116)
Q Consensus 83 ~~ 84 (116)
.+
T Consensus 254 s~ 255 (319)
T KOG4714|consen 254 ST 255 (319)
T ss_pred CC
Confidence 63
No 281
>KOG1645|consensus
Probab=98.34 E-value=4.7e-06 Score=51.00 Aligned_cols=76 Identities=12% Similarity=-0.010 Sum_probs=62.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~ 81 (116)
+...|.+++|+|.+...+..++.+.++.+.|+++...+..+..+ ..+++.+|.-++. +++.|..+|.|.+||
T Consensus 192 ~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-------~~~wSC~wDlde~h~IYaGl~nG~VlvyD 264 (463)
T KOG1645|consen 192 EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-------NQIWSCCWDLDERHVIYAGLQNGMVLVYD 264 (463)
T ss_pred cchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-------CCceeeeeccCCcceeEEeccCceEEEEE
Confidence 34568899999965557888999999999999988877777766 4799999998765 777788899999999
Q ss_pred CCCC
Q psy17133 82 NVSG 85 (116)
Q Consensus 82 ~~~~ 85 (116)
++..
T Consensus 265 ~R~~ 268 (463)
T KOG1645|consen 265 MRQP 268 (463)
T ss_pred ccCC
Confidence 8753
No 282
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.33 E-value=0.00014 Score=44.08 Aligned_cols=111 Identities=13% Similarity=0.170 Sum_probs=72.7
Q ss_pred CCceEEEEccCCCcEEEEee-CCCeEEEEECCCC-ceeEEEecCCc---CcCCCCceeEEEEcCCCCEEEEEeC-CCeEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETG-KPVVRIDSSQF---GVSGGGGINRVVCHPTLPLTITAHD-DRHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~-~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~ 78 (116)
.....+.|+| +++++.... .+++|.+|..... .....++.... ..........+.++|+|++|+++.. ...|.
T Consensus 191 ~GPRHi~FHp-n~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~ 269 (346)
T COG2706 191 AGPRHIVFHP-NGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIA 269 (346)
T ss_pred CCcceEEEcC-CCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEE
Confidence 4567899999 778776655 5899999988753 22333222111 1111345678999999999988754 34777
Q ss_pred EEECC--CCeEEE--EeecccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNV--SGKLVH--SMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~--~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|.+. ++++.. ....+....+.+.|+|++++|+.+..|
T Consensus 270 ~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~ 311 (346)
T COG2706 270 VFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQK 311 (346)
T ss_pred EEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccC
Confidence 88764 343322 222344457899999999999987654
No 283
>KOG3617|consensus
Probab=98.30 E-value=2.1e-06 Score=57.21 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=73.8
Q ss_pred eEEEEccCCCcEEEEee----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 8 TSIDFVRDESTKMVTAF----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+-.+|+| ...++++++ ..|.|.||- ++|++.....- +-.++++||+|..-.++.+=+.|.+.+|...
T Consensus 19 ti~SWHP-sePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-------P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~ 89 (1416)
T KOG3617|consen 19 TISSWHP-SEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-------PVHATSLCWHPEEFVLAQGWEMGVSDVQKTN 89 (1416)
T ss_pred cccccCC-CCceeEEEEecCCCCceEEEEe-cCCCCCccccc-------ceehhhhccChHHHHHhhccccceeEEEecC
Confidence 3457899 667777665 467788875 34654433321 2347789999998888999889999999987
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+.+.-.....|...+..+.|+++|..++|+-
T Consensus 90 ~~e~htv~~th~a~i~~l~wS~~G~~l~t~d 120 (1416)
T KOG3617|consen 90 TTETHTVVETHPAPIQGLDWSHDGTVLMTLD 120 (1416)
T ss_pred CceeeeeccCCCCCceeEEecCCCCeEEEcC
Confidence 7766555667899999999999999998763
No 284
>KOG3914|consensus
Probab=98.28 E-value=9.4e-06 Score=49.43 Aligned_cols=63 Identities=24% Similarity=0.303 Sum_probs=50.8
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ecccccEEEEEECCCCcEEEeeecC
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM-VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
-+.+..++++||+++++++..|..|++-.....-.+..+ .+|..-|..++.-++.. |+++|.|
T Consensus 151 vSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~-LlS~sGD 214 (390)
T KOG3914|consen 151 VSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYL-LLSGSGD 214 (390)
T ss_pred hhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCce-eeecCCC
Confidence 678999999999999999999999999887655554443 47899999999877654 6666655
No 285
>KOG1354|consensus
Probab=98.26 E-value=7e-05 Score=45.39 Aligned_cols=108 Identities=16% Similarity=0.145 Sum_probs=73.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----eeEEEecCCcCc------CCCCceeEEEEcCCCC--EEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----PVVRIDSSQFGV------SGGGGINRVVCHPTLP--LTITA 71 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~~------~~~~~i~~~~~~~~~~--~~~~~ 71 (116)
.-+.++.|.. .|++|++|..+|.|.++.-.... ....+..|.... .-...|..+.|.+++. .+...
T Consensus 26 diis~vef~~-~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 26 DIISAVEFDH-YGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred cceeeEEeec-ccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4478899998 89999999999999998754322 122333332211 1234678899998754 56667
Q ss_pred eCCCeEEEEECCCCe-----------------------------------EEEEee-cccccEEEEEECCCCcEEEee
Q psy17133 72 HDDRHIRFFDNVSGK-----------------------------------LVHSMV-AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 72 ~~d~~i~~~~~~~~~-----------------------------------~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 113 (116)
..|.+|++|-+.... +.+.+. .|.-.+.+++++.|+..++++
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA 182 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA 182 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence 789999999765321 111121 456678999999999988875
No 286
>KOG1240|consensus
Probab=98.25 E-value=1.3e-05 Score=55.19 Aligned_cols=78 Identities=10% Similarity=0.147 Sum_probs=55.6
Q ss_pred EECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECCCC-------eEEEEeecccccEEEEEE
Q psy17133 32 FDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNVSG-------KLVHSMVAHLDAVTSLAV 103 (116)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~-------~~~~~~~~~~~~v~~~~~ 103 (116)
|..+ |..+..+..| +..+..++.++. +.++++++.||+|++|+.+.- +...++.....++..+.+
T Consensus 1034 W~p~-G~lVAhL~Eh------s~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~ 1106 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEH------SSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTM 1106 (1431)
T ss_pred CCcc-ceEeehhhhc------cccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEe
Confidence 4443 5555555555 556778887765 599999999999999997631 223334334568888999
Q ss_pred CCCCcEEEeeecC
Q psy17133 104 DPQGLYILSGTYQ 116 (116)
Q Consensus 104 ~~~~~~l~~~s~d 116 (116)
.+.+..+|.++.|
T Consensus 1107 ~~~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1107 CGNGDQFAVSTKD 1119 (1431)
T ss_pred ccCCCeEEEEcCC
Confidence 9999999988766
No 287
>KOG4532|consensus
Probab=98.24 E-value=0.00012 Score=43.14 Aligned_cols=101 Identities=11% Similarity=0.118 Sum_probs=66.5
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEEEECCC
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~~~~~~ 84 (116)
.+..|+. ....++++++|+.+.|||++...... +....++ .|.+.+....|++.|. +|...-.-+.+.+.|+++
T Consensus 207 F~~S~s~-~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp--~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~ 283 (344)
T KOG4532|consen 207 FYNSFSE-NDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRP--HHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN 283 (344)
T ss_pred eeeeecc-CcceEEEEecCCcEEEEEecccccchhhhcccCC--CCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence 5677887 66889999999999999998543322 2211111 1367899999998765 455554567899999998
Q ss_pred CeEEEEeec-------c-cccEEEEEECCCCcEEE
Q psy17133 85 GKLVHSMVA-------H-LDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 85 ~~~~~~~~~-------~-~~~v~~~~~~~~~~~l~ 111 (116)
++-.+.+.. | .+.+..-+|+.++..+.
T Consensus 284 ~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~ 318 (344)
T KOG4532|consen 284 YVNHQVIVIPDDVERKHNTQHIFGTNFNNENESND 318 (344)
T ss_pred CceeeEEecCccccccccccccccccccCCCcccc
Confidence 765544331 1 23466677776655443
No 288
>KOG1409|consensus
Probab=98.24 E-value=7.3e-06 Score=49.32 Aligned_cols=78 Identities=9% Similarity=0.163 Sum_probs=62.6
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.|.+.+.++.|.+ ....+.++..+..+.+||+-.++ ...++.++ ...+..+..-+.-+.+.+++.|+.|.+|
T Consensus 195 ~h~~~~~~l~Wd~-~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh------~~kV~~l~~~~~t~~l~S~~edg~i~~w 267 (404)
T KOG1409|consen 195 GHTGEVTCLKWDP-GQRLLFSGASDHSVIMWDIGGRKGTAYELQGH------NDKVQALSYAQHTRQLISCGEDGGIVVW 267 (404)
T ss_pred CcccceEEEEEcC-CCcEEEeccccCceEEEeccCCcceeeeeccc------hhhhhhhhhhhhheeeeeccCCCeEEEE
Confidence 3778899999999 77889999999999999997433 23445556 5678888777777889999999999999
Q ss_pred ECCCCe
Q psy17133 81 DNVSGK 86 (116)
Q Consensus 81 ~~~~~~ 86 (116)
++...+
T Consensus 268 ~mn~~r 273 (404)
T KOG1409|consen 268 NMNVKR 273 (404)
T ss_pred ecccee
Confidence 987543
No 289
>KOG1912|consensus
Probab=98.22 E-value=5.7e-05 Score=50.21 Aligned_cols=103 Identities=13% Similarity=0.205 Sum_probs=76.2
Q ss_pred CCCCCceEEEEccCC----------C-cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC---CC-C
Q psy17133 2 FYNGTPTSIDFVRDE----------S-TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP---TL-P 66 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~----------~-~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~-~ 66 (116)
+|...|+.+.|.|-. . -.|+++...|+|.+||...+..+..+..+ ...+..++|-+ +. .
T Consensus 53 ~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~------~~~~qdl~W~~~rd~Srd 126 (1062)
T KOG1912|consen 53 LHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHS------NDSVQDLCWVPARDDSRD 126 (1062)
T ss_pred cCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCC------CcchhheeeeeccCcchh
Confidence 356778888887631 1 14556667899999999988888888777 56788888876 33 4
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEE
Q psy17133 67 LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYI 110 (116)
Q Consensus 67 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l 110 (116)
+++......++.+|+..+|+.............++.+.| |.+.+
T Consensus 127 ~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~ 171 (1062)
T KOG1912|consen 127 VLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHF 171 (1062)
T ss_pred eeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceE
Confidence 777788889999999999998877664444566788877 54544
No 290
>KOG1064|consensus
Probab=98.20 E-value=3.7e-05 Score=55.14 Aligned_cols=104 Identities=16% Similarity=0.216 Sum_probs=75.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..|.++.=+| ...+.++|+.|+.+++|....++++..+.... +..++...|+.+|.....+..||.+.+|....
T Consensus 2209 ~~v~r~~sHp-~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g-----~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p 2282 (2439)
T KOG1064|consen 2209 ENVRRMTSHP-SDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAG-----NSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP 2282 (2439)
T ss_pred CceeeecCCC-CCceEEecCCCceEEEEeccCCCeEEEeeccC-----cchhhhhhhcccCCceeeeccCCceeecccCC
Confidence 4566666677 56788999999999999998888888776542 24566677777777666666677777775432
Q ss_pred C---------------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 85 G---------------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 85 ~---------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
. ..+. ..|.+.++++++.|..+.|++|+.+
T Consensus 2283 k~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred cceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCc
Confidence 1 1222 4578889999999999999999864
No 291
>KOG4714|consensus
Probab=98.18 E-value=2.1e-06 Score=49.83 Aligned_cols=62 Identities=15% Similarity=0.248 Sum_probs=50.0
Q ss_pred ceeEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEE-EEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 55 GINRVVCHPTL-PLTITAHDDRHIRFFDNVSGKLV-HSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 55 ~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
.+.+++-+|.. .++++|++||.+.+||.++.... ..+..|+..++.+-|+| ++..|++++.|
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sed 245 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSED 245 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCC
Confidence 48889999975 57788999999999999877443 34567899999999998 56788888765
No 292
>KOG2066|consensus
Probab=98.17 E-value=0.00012 Score=48.57 Aligned_cols=90 Identities=14% Similarity=0.115 Sum_probs=63.4
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-----CCEEEEEeCCCeEEEEECC--CCeEE
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-----LPLTITAHDDRHIRFFDNV--SGKLV 88 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~d~~i~~~~~~--~~~~~ 88 (116)
+|.++++++.||++.|-.+.+.+....+.-+ .++.+++++|+ .+.+++|+..| +.++.-. ..+..
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df~-------rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~ 153 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQYDFK-------RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDS 153 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCccceeEecC-------CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccc
Confidence 4899999999999999998887776666655 46899999997 45788888888 7666521 11111
Q ss_pred EEeecccccEEEEEECCCCcEEEeeec
Q psy17133 89 HSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 89 ~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
..+....+.|.+++|. |.++|-++.
T Consensus 154 v~l~~~eG~I~~i~W~--g~lIAWand 178 (846)
T KOG2066|consen 154 VVLSEGEGPIHSIKWR--GNLIAWAND 178 (846)
T ss_pred eeeecCccceEEEEec--CcEEEEecC
Confidence 1344457789999884 446655443
No 293
>KOG1354|consensus
Probab=98.15 E-value=1.6e-05 Score=48.04 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=73.3
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCc------eeEEEecCCcCc----CCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGK------PVVRIDSSQFGV----SGGGGINRVVCHPTLPLTITAHDDR 75 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~------~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~d~ 75 (116)
.|++..|+|...++++.++..|.|++-|++... .+.+.+...... .--..|..+.|+++|+++++-. =.
T Consensus 215 VITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yl 293 (433)
T KOG1354|consen 215 VITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YL 293 (433)
T ss_pred HHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cc
Confidence 467888999878899999999999999997321 122211110000 1123577899999999998863 25
Q ss_pred eEEEEEC-CCCeEEEEeeccc------------cc---EEEEEECCCCcEEEeeec
Q psy17133 76 HIRFFDN-VSGKLVHSMVAHL------------DA---VTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 76 ~i~~~~~-~~~~~~~~~~~~~------------~~---v~~~~~~~~~~~l~~~s~ 115 (116)
+|++||+ ...+.+..+..|. .. -..++|+.++.+++|||.
T Consensus 294 tvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy 349 (433)
T KOG1354|consen 294 TVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSY 349 (433)
T ss_pred eeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccc
Confidence 8999998 3455555444331 12 256789999999999885
No 294
>KOG1064|consensus
Probab=98.12 E-value=3.7e-06 Score=59.78 Aligned_cols=86 Identities=17% Similarity=0.227 Sum_probs=62.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC-----------------------------------
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG----------------------------------- 49 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~----------------------------------- 49 (116)
.+|+.+.|+. +|+.+..+..||.+.+|... .++....++|...
T Consensus 2252 s~vtr~~f~~-qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s 2329 (2439)
T KOG1064|consen 2252 SRVTRSRFNH-QGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNS 2329 (2439)
T ss_pred chhhhhhhcc-cCCceeeeccCCceeecccC-CcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccc
Confidence 5566777776 67777777778888888765 2222222222211
Q ss_pred ---cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 50 ---VSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 50 ---~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
.+|.+.++++++.|...++++|+.+|.+++||++..++++.+.
T Consensus 2330 ~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~ 2375 (2439)
T KOG1064|consen 2330 LVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQ 2375 (2439)
T ss_pred eeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhh
Confidence 1678889999999999999999999999999998776665543
No 295
>KOG1409|consensus
Probab=98.12 E-value=6.9e-05 Score=45.32 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=48.1
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE-EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL-VHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|...+.+..|.|....+.++..|..+.+||+.-++- ...+.+|...|+.++..+.-+.+.+++.|
T Consensus 195 ~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~ed 261 (404)
T KOG1409|consen 195 GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGED 261 (404)
T ss_pred CcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCC
Confidence 4577899999999999999999999999999974433 23345666666666665555555555443
No 296
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.10 E-value=0.00018 Score=49.54 Aligned_cols=100 Identities=12% Similarity=0.137 Sum_probs=69.7
Q ss_pred CceEEEEccCCCcEEEEeeC------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCe
Q psy17133 6 TPTSIDFVRDESTKMVTAFD------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRH 76 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~ 76 (116)
.-..++|.. ||.++++++. .+.+++|+-+ |......+.- .+--..++|.|.|.++|+... ...
T Consensus 211 ~~~~ISWRG-DG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v------~gLe~~l~WrPsG~lIA~~q~~~~~~~ 282 (928)
T PF04762_consen 211 GRVRISWRG-DGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPV------DGLEGALSWRPSGNLIASSQRLPDRHD 282 (928)
T ss_pred CceEEEECC-CCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccC------CCccCCccCCCCCCEEEEEEEcCCCcE
Confidence 445789998 8899988763 2578999976 6544444422 344567899999999998764 345
Q ss_pred EEEEECCCCeEEEEee----cccccEEEEEECCCCcEEEeee
Q psy17133 77 IRFFDNVSGKLVHSMV----AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s 114 (116)
|.+|+ ++|-.-..+. .....+..+.|++|+..|+..-
T Consensus 283 VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~ 323 (928)
T PF04762_consen 283 VVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWL 323 (928)
T ss_pred EEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEe
Confidence 66666 4554433332 3456789999999999998644
No 297
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.06 E-value=8.2e-05 Score=46.88 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=61.3
Q ss_pred CceEEEEccCCCcEEEEe-eCCCe--EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CC--eEEE
Q psy17133 6 TPTSIDFVRDESTKMVTA-FDNSA--CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DR--HIRF 79 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~-~~~~~--v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~--~i~~ 79 (116)
.-....|+| ++++++.. ..++. ++++|+..++ +..+... .+.-..-.|+|||+.++..++ .| .|.+
T Consensus 239 ~~~~P~fsp-DG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~------~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~ 310 (425)
T COG0823 239 NNGAPAFSP-DGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNG------FGINTSPSWSPDGSKIVFTSDRGGRPQIYL 310 (425)
T ss_pred ccCCccCCC-CCCEEEEEECCCCCccEEEEcCCCCc-ceecccC------CccccCccCCCCCCEEEEEeCCCCCcceEE
Confidence 344568999 56666554 44554 6667777555 3334433 233347789999998876654 33 4777
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++.+.+...+... ....-..-.|+|+|++|+..+
T Consensus 311 ~~~~g~~~~riT~-~~~~~~~p~~SpdG~~i~~~~ 344 (425)
T COG0823 311 YDLEGSQVTRLTF-SGGGNSNPVWSPDGDKIVFES 344 (425)
T ss_pred ECCCCCceeEeec-cCCCCcCccCCCCCCEEEEEe
Confidence 7777665533332 222223678899999988654
No 298
>KOG2041|consensus
Probab=98.04 E-value=1.3e-05 Score=52.85 Aligned_cols=102 Identities=6% Similarity=-0.062 Sum_probs=75.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.-+.|+- +.+.|.++..+|-|.+|-+-.++...++...+. .+.|.+++|+.+|..++....||.|.+=.
T Consensus 69 GH~~sV~vvTWNe-~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRn----KSvV~SmsWn~dG~kIcIvYeDGavIVGs 143 (1189)
T KOG2041|consen 69 GHNASVMVVTWNE-NNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRN----KSVVVSMSWNLDGTKICIVYEDGAVIVGS 143 (1189)
T ss_pred cCcceEEEEEecc-ccccccccCCCceEEEEeeecccHHHHHhhCcC----ccEEEEEEEcCCCcEEEEEEccCCEEEEe
Confidence 3778899999987 668888888999999999988877666665543 56799999999999999999999998887
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcE
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLY 109 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 109 (116)
++..+.... .-.......+.|++|.+.
T Consensus 144 vdGNRIwgK-eLkg~~l~hv~ws~D~~~ 170 (1189)
T KOG2041|consen 144 VDGNRIWGK-ELKGQLLAHVLWSEDLEQ 170 (1189)
T ss_pred eccceecch-hcchheccceeecccHHH
Confidence 763322111 111123345677777553
No 299
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.04 E-value=0.00071 Score=41.02 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=68.6
Q ss_pred CceEEEEccCCCcEEEEe-eCCCeEEEEECCC--Cc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-eEE
Q psy17133 6 TPTSIDFVRDESTKMVTA-FDNSACVLFDLET--GK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-HIR 78 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~--~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-~i~ 78 (116)
..+.++|+| +++.+..+ +..+.++.|++.. +. ....+..... .+..-.++...+|.+.+++...+ .|.
T Consensus 164 ~~NGla~Sp-Dg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~----~G~PDG~~vDadG~lw~~a~~~g~~v~ 238 (307)
T COG3386 164 IPNGLAFSP-DGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEE----PGLPDGMAVDADGNLWVAAVWGGGRVV 238 (307)
T ss_pred ecCceEECC-CCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCC----CCCCCceEEeCCCCEEEecccCCceEE
Confidence 457899999 55555444 5568888887752 21 1111111111 45677889999999886665554 899
Q ss_pred EEECCCCeEEEEeecccccEEEEEEC-CCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVD-PQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~s 114 (116)
.|+.+ ++++..+......+++++|- |+.+.|+..+
T Consensus 239 ~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 239 RFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred EECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence 99988 99988887665778888884 5666665443
No 300
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.02 E-value=9.1e-05 Score=45.59 Aligned_cols=82 Identities=13% Similarity=0.195 Sum_probs=53.8
Q ss_pred CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cc----------
Q psy17133 26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AH---------- 94 (116)
Q Consensus 26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~---------- 94 (116)
.+.+.++|+++++....... ...+....|+|+|+.++... ++.|.+.+..+++..+.-. +.
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~-------~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dw 93 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP-------PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDW 93 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E-------ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--H
T ss_pred ceeEEEEecCCCceEECcCC-------ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccce
Confidence 35688999987654332222 24688999999999888875 5789999988775443322 10
Q ss_pred ------cccEEEEEECCCCcEEEeeec
Q psy17133 95 ------LDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 95 ------~~~v~~~~~~~~~~~l~~~s~ 115 (116)
-+.-..+-|+||+++|+....
T Consensus 94 vyeEEv~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 94 VYEEEVFDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp HHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred eccccccccccceEECCCCCEEEEEEE
Confidence 112356789999999987543
No 301
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.02 E-value=3.6e-05 Score=48.53 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=71.2
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----------
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD----------- 74 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d----------- 74 (116)
++....|+| .|.++++... ..|.+|.-.....+..+... .+..+.|+|.+++|.+-+..
T Consensus 34 p~~~~~~SP-~G~~l~~~~~-~~V~~~~g~~~~~l~~~~~~--------~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp 103 (561)
T COG5354 34 PVAYVSESP-LGTYLFSEHA-AGVECWGGPSKAKLVRFRHP--------DVKYLDFSPNEKYLVTWSREPIIEPEIEISP 103 (561)
T ss_pred chhheeecC-cchheehhhc-cceEEccccchhheeeeecC--------CceecccCcccceeeeeccCCccChhhccCC
Confidence 466788999 7788877654 46889988776666666644 68999999999999986543
Q ss_pred ----CeEEEEECCCCeEEEEeeccccc--EE-EEEECCCCcEEE
Q psy17133 75 ----RHIRFFDNVSGKLVHSMVAHLDA--VT-SLAVDPQGLYIL 111 (116)
Q Consensus 75 ----~~i~~~~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~ 111 (116)
+.+.+||+.++..+..+.....+ .+ -+.|+-+.++.+
T Consensus 104 ~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~A 147 (561)
T COG5354 104 FTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVA 147 (561)
T ss_pred ccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhh
Confidence 35999999999998887754443 33 567777766543
No 302
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.01 E-value=0.00035 Score=48.82 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=58.5
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCc--------CcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF--------GVSGGGGINRVVCHPTLPLTITAHDDRHI 77 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 77 (116)
.+..+++++ +++.+++...++.|++||..++... .+.+... ....-.....++++++|+++++-..++.|
T Consensus 805 ~P~Gvavd~-dG~LYVADs~N~rIrviD~~tg~v~-tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~I 882 (1057)
T PLN02919 805 HPLGVLCAK-DGQIYVADSYNHKIKKLDPATKRVT-TLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLI 882 (1057)
T ss_pred CCceeeEeC-CCcEEEEECCCCEEEEEECCCCeEE-EEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEE
Confidence 356888998 7788888888999999999866543 3322100 00012356789999999988888889999
Q ss_pred EEEECCCCeE
Q psy17133 78 RFFDNVSGKL 87 (116)
Q Consensus 78 ~~~~~~~~~~ 87 (116)
++||+.+++.
T Consensus 883 rvid~~~~~~ 892 (1057)
T PLN02919 883 RYLDLNKGEA 892 (1057)
T ss_pred EEEECCCCcc
Confidence 9999988764
No 303
>KOG0309|consensus
Probab=98.01 E-value=1.7e-05 Score=52.36 Aligned_cols=97 Identities=16% Similarity=0.220 Sum_probs=72.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|...|+++.|.|.....+++++.+..+..||+.+.. +...+..- ......+.|+-...-+.+.+..+.+++||
T Consensus 113 hsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w------~s~asqVkwnyk~p~vlasshg~~i~vwd 186 (1081)
T KOG0309|consen 113 HSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSW------RSAASQVKWNYKDPNVLASSHGNDIFVWD 186 (1081)
T ss_pred CccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecc------cccCceeeecccCcchhhhccCCceEEEe
Confidence 678899999999888899999999999999998643 44444333 34577889987655555555677899999
Q ss_pred CCCC-eEEEEeecccccEEEEEECC
Q psy17133 82 NVSG-KLVHSMVAHLDAVTSLAVDP 105 (116)
Q Consensus 82 ~~~~-~~~~~~~~~~~~v~~~~~~~ 105 (116)
.+.| ..+..+++|...+..+.|+.
T Consensus 187 ~r~gs~pl~s~K~~vs~vn~~~fnr 211 (1081)
T KOG0309|consen 187 LRKGSTPLCSLKGHVSSVNSIDFNR 211 (1081)
T ss_pred ccCCCcceEEecccceeeehHHHhh
Confidence 9755 45667777777777776654
No 304
>KOG2066|consensus
Probab=97.98 E-value=3.8e-05 Score=50.79 Aligned_cols=94 Identities=13% Similarity=0.098 Sum_probs=68.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...+.+++++. .+++.|.-+|.+++++.. +.. .....+. .. ..+|.++++++.||++.+..+.
T Consensus 39 ~D~is~~av~~---~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s------~~------~~~Gey~asCS~DGkv~I~sl~ 101 (846)
T KOG2066|consen 39 NDAISCCAVHD---KFFALGTHRGAVYLTTCQ-GNP-KTNFDHS------SS------ILEGEYVASCSDDGKVVIGSLF 101 (846)
T ss_pred hhHHHHHHhhc---ceeeeccccceEEEEecC-Ccc-ccccccc------cc------ccCCceEEEecCCCcEEEeecc
Confidence 34455555543 788889989999999986 444 3333441 11 6679999999999999999988
Q ss_pred CCeEEEEeecccccEEEEEECCC-----CcEEEeeec
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQ-----GLYILSGTY 115 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~s~ 115 (116)
+.+...++. ...++.+++++|+ .+.+++|+.
T Consensus 102 ~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ 137 (846)
T KOG2066|consen 102 TDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGM 137 (846)
T ss_pred CCccceeEe-cCCcceeEEeccchhhhhhhheeecCc
Confidence 887776665 3457889999998 456666653
No 305
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.97 E-value=0.0002 Score=48.21 Aligned_cols=95 Identities=15% Similarity=0.250 Sum_probs=60.7
Q ss_pred cEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133 18 TKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD 96 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 96 (116)
...+.|-.+..+..||.+- +..+..-..+.. .......+++-..+| .+|.|+.+|.|++||--..+....+.+-..
T Consensus 543 e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y--~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~ 619 (794)
T PF08553_consen 543 EQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQY--SSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGD 619 (794)
T ss_pred CceEEEECCCceEEeccCCCCCceeecccccc--ccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCC
Confidence 3445566677899999874 332222122111 002345666655555 688999999999999432232333445567
Q ss_pred cEEEEEECCCCcEEEeeec
Q psy17133 97 AVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 97 ~v~~~~~~~~~~~l~~~s~ 115 (116)
+|..+..+.||+|++..+.
T Consensus 620 pI~~iDvt~DGkwilaTc~ 638 (794)
T PF08553_consen 620 PIIGIDVTADGKWILATCK 638 (794)
T ss_pred CeeEEEecCCCcEEEEeec
Confidence 9999999999999887653
No 306
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.96 E-value=0.00056 Score=43.49 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=67.5
Q ss_pred CCCceEEEEccCCCcEEEEe--eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---CeEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTA--FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---RHIR 78 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~--~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~ 78 (116)
.++|....|.| .++.+++. ...-.+.++|+.. +.+..+... .-+.+.|+|.+++++.++-+ |.+.
T Consensus 274 ~~pVhdf~W~p-~S~~F~vi~g~~pa~~s~~~lr~-Nl~~~~Pe~--------~rNT~~fsp~~r~il~agF~nl~gni~ 343 (561)
T COG5354 274 KDPVHDFTWEP-LSSRFAVISGYMPASVSVFDLRG-NLRFYFPEQ--------KRNTIFFSPHERYILFAGFDNLQGNIE 343 (561)
T ss_pred cccceeeeecc-cCCceeEEecccccceeeccccc-ceEEecCCc--------ccccccccCcccEEEEecCCccccceE
Confidence 57899999999 55554443 4677889999974 444444432 45677799999999887765 6799
Q ss_pred EEECCCCeEEE-EeecccccEEEEEECCCCcEEEee
Q psy17133 79 FFDNVSGKLVH-SMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 79 ~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+|+........ .+.+ ...+-+.|+|+++++.+.
T Consensus 344 i~~~~~rf~~~~~~~~--~n~s~~~wspd~qF~~~~ 377 (561)
T COG5354 344 IFDPAGRFKVAGAFNG--LNTSYCDWSPDGQFYDTD 377 (561)
T ss_pred EeccCCceEEEEEeec--CCceEeeccCCceEEEec
Confidence 99987544433 3432 234557899999988654
No 307
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.96 E-value=0.001 Score=40.10 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=69.7
Q ss_pred EEEccCCCcEEEEee-----CCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC----------
Q psy17133 10 IDFVRDESTKMVTAF-----DNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------- 73 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~-----~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------- 73 (116)
-.|++ ++++|++.- ..|.|-+||.. +-+.+.++..+ .-....+.+.||++.|+.+..
T Consensus 56 g~fs~-dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~------GIGPHel~l~pDG~tLvVANGGI~Thpd~GR 128 (305)
T PF07433_consen 56 GVFSP-DGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSH------GIGPHELLLMPDGETLVVANGGIETHPDSGR 128 (305)
T ss_pred EEEcC-CCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCC------CcChhhEEEcCCCCEEEEEcCCCccCcccCc
Confidence 46888 788887753 24779999998 56778888877 334678889999977766532
Q ss_pred --------CCeEEEEECCCCeEEEEee----cccccEEEEEECCCCcEEEe
Q psy17133 74 --------DRHIRFFDNVSGKLVHSMV----AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 74 --------d~~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~ 112 (116)
+-.+...|..+|+++.+.. .|...++.+++.++|..++.
T Consensus 129 ~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a 179 (305)
T PF07433_consen 129 AKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFA 179 (305)
T ss_pred eecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEE
Confidence 1236666778888877643 35668999999999887654
No 308
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.95 E-value=3.1e-05 Score=30.79 Aligned_cols=30 Identities=27% Similarity=0.427 Sum_probs=26.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFD 33 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~ 33 (116)
|...+.++.|.+ ++..+++++.++.+++|+
T Consensus 11 ~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 11 HTGPVTSVAFSP-DGKYLASASDDGTIKLWD 40 (40)
T ss_pred cCCceeEEEECC-CCCEEEEecCCCeEEEcC
Confidence 567899999998 668999999999999986
No 309
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.93 E-value=0.00046 Score=43.87 Aligned_cols=49 Identities=24% Similarity=0.230 Sum_probs=33.4
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 65 LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|.++...+.+ .|.+||+++++.++.+... .|..+.|++++.+++..+.|
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~ 165 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD 165 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC
Confidence 7767666544 8999999999999988633 48999999999999877653
No 310
>KOG4190|consensus
Probab=97.89 E-value=2.2e-05 Score=50.43 Aligned_cols=80 Identities=15% Similarity=0.246 Sum_probs=58.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-Cc------eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GK------PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR 75 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 75 (116)
|...|..+.--. +.+-+++++.|.+|++|.+.. +. ...++..| ...|.++.|-.+-+.++++ |+
T Consensus 734 H~~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aH------kk~i~~igfL~~lr~i~Sc--D~ 804 (1034)
T KOG4190|consen 734 HQEKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAH------KKPIHDIGFLADLRSIASC--DG 804 (1034)
T ss_pred cHHHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEhhhc------cCcccceeeeeccceeeec--cC
Confidence 445555555443 668889999999999999863 22 34455555 6789999998888877766 78
Q ss_pred eEEEEECCCCeEEEEe
Q psy17133 76 HIRFFDNVSGKLVHSM 91 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~ 91 (116)
-|.+||.--++.+.++
T Consensus 805 giHlWDPFigr~Laq~ 820 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQM 820 (1034)
T ss_pred cceeecccccchhHhh
Confidence 8999998777766544
No 311
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.88 E-value=0.00013 Score=31.55 Aligned_cols=33 Identities=12% Similarity=0.200 Sum_probs=29.2
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
...|..++|+|+..++|.+..+|.|.++.+ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 356899999999999999999999999998 444
No 312
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.86 E-value=0.00044 Score=43.72 Aligned_cols=100 Identities=19% Similarity=0.207 Sum_probs=61.5
Q ss_pred CceEEEEccCCCcEEEEe-eC--C-CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCe--EE
Q psy17133 6 TPTSIDFVRDESTKMVTA-FD--N-SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRH--IR 78 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~-~~--~-~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~--i~ 78 (116)
.+..-.|+| ++..++.- .. . ..++++++++++........ +.-...+|+|||+.++. ...|+. |.
T Consensus 194 ~~~~p~ws~-~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~-------g~~~~P~fspDG~~l~f~~~rdg~~~iy 265 (425)
T COG0823 194 LILTPAWSP-DGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFN-------GNNGAPAFSPDGSKLAFSSSRDGSPDIY 265 (425)
T ss_pred ceeccccCc-CCCceEEEEEecCCCceEEEEeccCCccceeeccC-------CccCCccCCCCCCEEEEEECCCCCccEE
Confidence 345567888 55554433 22 2 45889999877654444322 23456789999986654 444554 66
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+.|+..+...+ +....+.-..-.|+|||++++-.+
T Consensus 266 ~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~S 300 (425)
T COG0823 266 LMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTS 300 (425)
T ss_pred EEcCCCCccee-cccCCccccCccCCCCCCEEEEEe
Confidence 67877666433 433333334678999999988654
No 313
>KOG4649|consensus
Probab=97.86 E-value=0.00083 Score=39.66 Aligned_cols=83 Identities=13% Similarity=0.046 Sum_probs=59.6
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133 17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD 96 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 96 (116)
+++++.|..++.+++.+.++|.+...+.... ..-......+++.++..++.|+....-|.++...+...+...+
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~------~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~ 136 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILE------TVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGG 136 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehh------hhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCc
Confidence 4677888889999999999998777766541 1122345678899999999999999999998877776553333
Q ss_pred cEEEEEECC
Q psy17133 97 AVTSLAVDP 105 (116)
Q Consensus 97 ~v~~~~~~~ 105 (116)
...+-+..|
T Consensus 137 ~f~sP~i~~ 145 (354)
T KOG4649|consen 137 TFVSPVIAP 145 (354)
T ss_pred eeccceecC
Confidence 333444555
No 314
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.84 E-value=0.0008 Score=44.24 Aligned_cols=103 Identities=11% Similarity=0.091 Sum_probs=68.1
Q ss_pred CCCceEEEEccCCCcEEEEee-CCCeEEEEECCCCce------------eEEEecCCcCcCCCCceeEEEEcCCCCEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKP------------VVRIDSSQFGVSGGGGINRVVCHPTLPLTIT 70 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (116)
...+..+.++| +++++++++ .+..+.+.|+.+.+. +.+.+.. ......+|.++|....+
T Consensus 320 GKsPHGV~vSP-DGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG-------lGPLHTaFDg~G~ayts 391 (635)
T PRK02888 320 PKNPHGVNTSP-DGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG-------LGPLHTAFDGRGNAYTT 391 (635)
T ss_pred CCCccceEECC-CCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC-------CCcceEEECCCCCEEEe
Confidence 35567899999 677766555 588999999986543 2222221 23456778889888888
Q ss_pred EeCCCeEEEEECCC----------CeEEEEeecccccEEEE-----EECCCCcEEEeee
Q psy17133 71 AHDDRHIRFFDNVS----------GKLVHSMVAHLDAVTSL-----AVDPQGLYILSGT 114 (116)
Q Consensus 71 ~~~d~~i~~~~~~~----------~~~~~~~~~~~~~v~~~-----~~~~~~~~l~~~s 114 (116)
.--|..|..|++.+ ...+..+.-|.+..... .-.|+|+||++.+
T Consensus 392 lf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~n 450 (635)
T PRK02888 392 LFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLN 450 (635)
T ss_pred EeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEcc
Confidence 88899999999876 23344444343322222 2368899998764
No 315
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.83 E-value=0.00015 Score=31.36 Aligned_cols=34 Identities=3% Similarity=0.155 Sum_probs=29.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP 39 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~ 39 (116)
...|..++|+| ..+.++.+..+|+|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCP-TMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECC-CCCEEEEEECCCeEEEEEC-CCcC
Confidence 35688999999 8899999999999999998 4543
No 316
>KOG2079|consensus
Probab=97.82 E-value=0.00014 Score=49.81 Aligned_cols=90 Identities=17% Similarity=0.226 Sum_probs=61.7
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA 97 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 97 (116)
..++.++..+.+...|+... .-....+... .++|++++++.+|+.++.|-.+|.|.+||+..++.++.+..+..+
T Consensus 100 ~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v----~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap 174 (1206)
T KOG2079|consen 100 VPIVIGTSHGHVLLSDMTGN-LGPLHQNERV----QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAP 174 (1206)
T ss_pred eeEEEEcCchhhhhhhhhcc-cchhhcCCcc----CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCc
Confidence 45777777888888777532 1111122222 578999999999999999999999999999998888887655544
Q ss_pred EEEE---EECCCCcEEEe
Q psy17133 98 VTSL---AVDPQGLYILS 112 (116)
Q Consensus 98 v~~~---~~~~~~~~l~~ 112 (116)
...+ .+..++..+++
T Consensus 175 ~t~vi~v~~t~~nS~llt 192 (1206)
T KOG2079|consen 175 VTGVIFVGRTSQNSKLLT 192 (1206)
T ss_pred cceEEEEEEeCCCcEEEE
Confidence 4333 33444444443
No 317
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.77 E-value=0.0013 Score=40.80 Aligned_cols=71 Identities=8% Similarity=0.122 Sum_probs=44.6
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL 95 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 95 (116)
..+++++.++.++.+|..+++.+....... ........+ .+..++.++.++.+.++|..+++.+..+..+.
T Consensus 280 ~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~-----~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~ 350 (377)
T TIGR03300 280 NRLYVTDADGVVVALDRRSGSELWKNDELK-----YRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDG 350 (377)
T ss_pred CEEEEECCCCeEEEEECCCCcEEEcccccc-----CCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence 455555667777777777666554432110 011111111 35678888899999999999999988776444
No 318
>KOG1912|consensus
Probab=97.70 E-value=0.00021 Score=47.71 Aligned_cols=91 Identities=16% Similarity=0.166 Sum_probs=71.9
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC------------CCEEEEEeC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT------------LPLTITAHD 73 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~ 73 (116)
.-.+++|+| . ..++.|+ ...|.+-|..+-+.+..++.| +..|+.+.|.|. ...++++.-
T Consensus 17 N~~A~Dw~~-~-GLiAygs-hslV~VVDs~s~q~iqsie~h------~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~ 87 (1062)
T KOG1912|consen 17 NRNAADWSP-S-GLIAYGS-HSLVSVVDSRSLQLIQSIELH------QSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI 87 (1062)
T ss_pred cccccccCc-c-ceEEEec-CceEEEEehhhhhhhhccccC------ccceeEEEeccCCCchhccCccccceeEEeccc
Confidence 346778887 3 5677766 557889999988889999888 678999999862 125667777
Q ss_pred CCeEEEEECCCCeEEEEeecccccEEEEEECC
Q psy17133 74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP 105 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 105 (116)
.|.|.+||...+..+..+..+...+..++|-+
T Consensus 88 ~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~ 119 (1062)
T KOG1912|consen 88 SGRIILVDFVLASVINWLSHSNDSVQDLCWVP 119 (1062)
T ss_pred cCcEEEEEehhhhhhhhhcCCCcchhheeeee
Confidence 89999999998888888888888899998854
No 319
>KOG3621|consensus
Probab=97.68 E-value=0.00021 Score=46.92 Aligned_cols=79 Identities=8% Similarity=-0.039 Sum_probs=57.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+.+..+..++ +..+++.|+..+.|.++.+....+............|...|++++|++++..+++|...|+|.+-.+.+
T Consensus 77 ~~~~~~~vs~-~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 77 GITCVRSVSS-VEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ceEEEEEecc-hhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 4455666777 667888889999999998875433222111111122467899999999999999999999999888776
No 320
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.67 E-value=0.0032 Score=37.14 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=66.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+.++.|.|+++.++++....+.|..++.. |+.+..+.-.. .+....+++.-++.++++.-.++.+.++++..
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g-----~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~ 95 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDG-----FGDYEGITYLGNGRYVLSEERDQRLYIFTIDD 95 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS------SSEEEEEE-STTEEEEEETTTTEEEEEEE--
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCC-----CCCceeEEEECCCEEEEEEcCCCcEEEEEEec
Confidence 3588999999656677777888999999975 78888776542 25688899988887777776689999998732
Q ss_pred C------eEEEEee-----cccccEEEEEECCCCcEEEee
Q psy17133 85 G------KLVHSMV-----AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 85 ~------~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~ 113 (116)
. .....+. .+...+-.++|+|.++.|+.+
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~ 135 (248)
T PF06977_consen 96 DTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVA 135 (248)
T ss_dssp --TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEE
T ss_pred cccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEE
Confidence 1 1112222 234468899999987766654
No 321
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.67 E-value=0.0035 Score=37.61 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=65.0
Q ss_pred EEEEccCCCcEEEEeeCCCe-EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEEC
Q psy17133 9 SIDFVRDESTKMVTAFDNSA-CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDN 82 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~ 82 (116)
.+.|+|.-+.-++.+-.-++ ..++|..+.+....+..... ....--=.|+|||.+++..-+| |.|-+||.
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~----RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~ 147 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEG----RHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDA 147 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccC----ceeecccccCCCCcEEEeecCCCCCCCceEEEEec
Confidence 45666643444455544444 55788887766655544321 1122234589999999876554 78999998
Q ss_pred CCCe-EEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 83 VSGK-LVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 83 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
..+- .+..+..|.-....+.+.+||+.++.+.
T Consensus 148 r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 148 REGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred ccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 7442 2344556666677889999999988654
No 322
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.67 E-value=0.0015 Score=43.04 Aligned_cols=95 Identities=12% Similarity=0.112 Sum_probs=55.1
Q ss_pred CCceEEEEccCCCcEEEEee------CCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-C
Q psy17133 5 GTPTSIDFVRDESTKMVTAF------DNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-R 75 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~------~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~ 75 (116)
..+.+.+.+| +++.++... .+. .+.+++. .+.......+. ......|+|+|..+++.... .
T Consensus 350 ~~vsspaiSp-dG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--------~~t~PsWspDG~~lw~v~dg~~ 419 (591)
T PRK13616 350 GNITSAALSR-SGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--------SLTRPSWSLDADAVWVVVDGNT 419 (591)
T ss_pred cCcccceECC-CCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--------CCCCceECCCCCceEEEecCcc
Confidence 3567788999 667665543 233 4555554 23332222222 37788999998877666432 2
Q ss_pred -----------eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 76 -----------HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 76 -----------~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.+.+.++..++... .....|..+.|+|||..++.
T Consensus 420 ~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~ 464 (591)
T PRK13616 420 VVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAM 464 (591)
T ss_pred eEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEE
Confidence 23333333332222 12457999999999998774
No 323
>KOG1832|consensus
Probab=97.62 E-value=0.00037 Score=47.47 Aligned_cols=44 Identities=14% Similarity=0.216 Sum_probs=37.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ 47 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~ 47 (116)
++...++++|+. +.+.|++|+-.|.|+++++.+|.......+|.
T Consensus 1100 ~~~~fTc~afs~-~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~ 1143 (1516)
T KOG1832|consen 1100 ETALFTCIAFSG-GTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQ 1143 (1516)
T ss_pred cccceeeEEeec-CCceEEeeeccceEEEEEccCccccccccccc
Confidence 345678999998 77999999999999999999998888887773
No 324
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.61 E-value=0.004 Score=41.15 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=52.0
Q ss_pred CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---------------------------------
Q psy17133 26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH--------------------------------- 72 (116)
Q Consensus 26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------------------------------- 72 (116)
.+.+.+.|.++.+....+... +....+.++|+++++++.+
T Consensus 214 ~~~vSvID~etmeV~~qV~Vd-------gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vk 286 (635)
T PRK02888 214 RSLFTAVDAETMEVAWQVMVD-------GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVK 286 (635)
T ss_pred eEEEEEEECccceEEEEEEeC-------CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhh
Confidence 455667777776665555543 2344566677777665553
Q ss_pred -------CCCeEEEEECCC-----CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 73 -------DDRHIRFFDNVS-----GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 73 -------~d~~i~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.++.|.+.|..+ .+.+..+. -......+.++|||++++.++.
T Consensus 287 dGK~~~V~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVank 340 (635)
T PRK02888 287 AGKFKTIGGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGK 340 (635)
T ss_pred CCCEEEECCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCC
Confidence 235577788776 23444443 3446788999999999987654
No 325
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.59 E-value=0.0055 Score=38.64 Aligned_cols=98 Identities=14% Similarity=0.111 Sum_probs=59.5
Q ss_pred eEEEEccCCCcEEEEe-eCC----CeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-------
Q psy17133 8 TSIDFVRDESTKMVTA-FDN----SACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDD------- 74 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~-~~~----~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d------- 74 (116)
..+.++| ++++++.+ +.. ..++++|+.+++.+... ... ....+.|.++++.++....+
T Consensus 127 ~~~~~Sp-dg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--------~~~~~~W~~d~~~~~y~~~~~~~~~~~ 197 (414)
T PF02897_consen 127 GGFSVSP-DGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--------KFSSVSWSDDGKGFFYTRFDEDQRTSD 197 (414)
T ss_dssp EEEEETT-TSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--------ESEEEEECTTSSEEEEEECSTTTSS-C
T ss_pred eeeeECC-CCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--------ccceEEEeCCCCEEEEEEeCccccccc
Confidence 3577899 77777654 332 45999999998765432 222 22349999998866554322
Q ss_pred ----CeEEEEECCCCeE--EEEeecccc-c-EEEEEECCCCcEEEeee
Q psy17133 75 ----RHIRFFDNVSGKL--VHSMVAHLD-A-VTSLAVDPQGLYILSGT 114 (116)
Q Consensus 75 ----~~i~~~~~~~~~~--~~~~~~~~~-~-v~~~~~~~~~~~l~~~s 114 (116)
..|+.|.+.+... ...+..... . ...+..++++++++..+
T Consensus 198 ~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~ 245 (414)
T PF02897_consen 198 SGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISS 245 (414)
T ss_dssp CGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEE
T ss_pred CCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEE
Confidence 2477888766532 233333222 2 56788899999987543
No 326
>KOG1645|consensus
Probab=97.54 E-value=0.00055 Score=42.40 Aligned_cols=60 Identities=20% Similarity=0.146 Sum_probs=49.5
Q ss_pred CCceeEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 53 GGGINRVVCHPTLP-LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 53 ~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
...|.+++++|... ++..++.+++|++.|+++......+..+ ..+++++|..+....+-+
T Consensus 193 g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 193 GSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA 253 (463)
T ss_pred chhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence 56789999999877 6778889999999999999888888766 679999999876654433
No 327
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.54 E-value=0.0051 Score=35.98 Aligned_cols=96 Identities=19% Similarity=0.207 Sum_probs=62.7
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc-CCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH-PTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
.+..|.+.++.++++....+.|+.|+..++.. ..+... ....+.+. +++.++++. .. .+.++|..+++
T Consensus 3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~-~~~~~~--------~~~G~~~~~~~g~l~v~~-~~-~~~~~d~~~g~ 71 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEV-EVIDLP--------GPNGMAFDRPDGRLYVAD-SG-GIAVVDPDTGK 71 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEEESS--------SEEEEEEECTTSEEEEEE-TT-CEEEEETTTTE
T ss_pred cceEEECCCCEEEEEEcCCCEEEEEECCCCeE-EEEecC--------CCceEEEEccCCEEEEEE-cC-ceEEEecCCCc
Confidence 46788875666777766789999999986643 334433 26777777 666555554 33 44555998886
Q ss_pred EEEEeec-----ccccEEEEEECCCCcEEEeee
Q psy17133 87 LVHSMVA-----HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 87 ~~~~~~~-----~~~~v~~~~~~~~~~~l~~~s 114 (116)
....... .......+++.|+|++.++..
T Consensus 72 ~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~ 104 (246)
T PF08450_consen 72 VTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDS 104 (246)
T ss_dssp EEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEE
T ss_pred EEEEeeccCCCcccCCCceEEEcCCCCEEEEec
Confidence 6554432 234678999999999777643
No 328
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=97.51 E-value=0.0011 Score=27.94 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=26.6
Q ss_pred CCceEEEEccCCC--cEEEEeeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDES--TKMVTAFDNSACVLFDLET 36 (116)
Q Consensus 5 ~~v~~~~~~~~~~--~~l~~~~~~~~v~i~~~~~ 36 (116)
|.+.++.|+|..+ ++|+.+-..+.+.++|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 5789999998555 6888877889999999984
No 329
>KOG3617|consensus
Probab=97.50 E-value=0.00018 Score=48.61 Aligned_cols=70 Identities=9% Similarity=0.090 Sum_probs=56.8
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+++++|+| ..-.|+.+-..+.+.+|...+.+.-.....| +..+..+.|+|+|..+.++..-|.+.+|...
T Consensus 62 atSLCWHp-e~~vLa~gwe~g~~~v~~~~~~e~htv~~th------~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 62 ATSLCWHP-EEFVLAQGWEMGVSDVQKTNTTETHTVVETH------PAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhhccCh-HHHHHhhccccceeEEEecCCceeeeeccCC------CCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 46788999 6567777878899999998765543333455 6789999999999999999999999999876
No 330
>KOG4499|consensus
Probab=97.47 E-value=0.0065 Score=35.57 Aligned_cols=102 Identities=13% Similarity=0.088 Sum_probs=68.9
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEE--CCCCc-----eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFD--LETGK-----PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~--~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
..++|+.+...+.+.-+.+-.|.-|| ..+|. .+..++..+. ...-....+++..+|.+.++.-+.++|...
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~--~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQP--FESLEPDGMTIDTEGNLYVATFNGGTVQKV 238 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCC--cCCCCCCcceEccCCcEEEEEecCcEEEEE
Confidence 56788864445556667788887777 55553 2333332211 001224456777788888888888999999
Q ss_pred ECCCCeEEEEeecccccEEEEEEC-CCCcEEE
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVD-PQGLYIL 111 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~ 111 (116)
|..+|+.+..+.-....+++++|- ++-..|+
T Consensus 239 dp~tGK~L~eiklPt~qitsccFgGkn~d~~y 270 (310)
T KOG4499|consen 239 DPTTGKILLEIKLPTPQITSCCFGGKNLDILY 270 (310)
T ss_pred CCCCCcEEEEEEcCCCceEEEEecCCCccEEE
Confidence 999999999988778899999995 3444444
No 331
>KOG1920|consensus
Probab=97.39 E-value=0.0025 Score=44.62 Aligned_cols=96 Identities=19% Similarity=0.233 Sum_probs=63.6
Q ss_pred eEEEEccCCCcEEEEee-----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---CCCeEEE
Q psy17133 8 TSIDFVRDESTKMVTAF-----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH---DDRHIRF 79 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~d~~i~~ 79 (116)
..+.|.. +|+++++.. ..+.+++||.+ |..-..-... .+.-.+++|-|.|.++++.. .+..|.+
T Consensus 199 ~~IsWRg-Dg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~------~~l~~~LsWkPsgs~iA~iq~~~sd~~Ivf 270 (1265)
T KOG1920|consen 199 TSISWRG-DGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPV------EGLQHSLSWKPSGSLIAAIQCKTSDSDIVF 270 (1265)
T ss_pred ceEEEcc-CCcEEEEEEEeccCCceeEEEeccc-chhhcccCcc------cccccceeecCCCCeEeeeeecCCCCcEEE
Confidence 4588987 888888743 23789999987 4432222222 23456899999999998854 3557888
Q ss_pred EECCCCeEEEE----eecccccEEEEEECCCCcEEEe
Q psy17133 80 FDNVSGKLVHS----MVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 80 ~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
+. ++|..-.. +......+..++|+.++..|++
T Consensus 271 fE-rNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv 306 (1265)
T KOG1920|consen 271 FE-RNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAV 306 (1265)
T ss_pred Ee-cCCccccccccCCcccccchheeeecCCCCceee
Confidence 87 33432222 2223344899999999998876
No 332
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.37 E-value=0.00064 Score=41.05 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=69.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~ 78 (116)
|.-.+.+++|.. +...++++ ++-+|-+|.++-.. .+..++++... .-...|++..|+|. ...+...+..|.|+
T Consensus 171 H~yhiNSiS~Ns-D~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nme-eLteVItSaeFhp~~cn~fmYSsSkG~Ik 247 (460)
T COG5170 171 HPYHINSISFNS-DKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNME-ELTEVITSAEFHPEMCNVFMYSSSKGEIK 247 (460)
T ss_pred ceeEeeeeeecC-chheeeec-cceeeeeccccccCCceEEEeccCccHH-HHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence 344567888887 55666654 47789999987322 34444554220 00135788999997 45666777899999
Q ss_pred EEECCCCeE------EEE--e--------ecccccEEEEEECCCCcEEEee
Q psy17133 79 FFDNVSGKL------VHS--M--------VAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 79 ~~~~~~~~~------~~~--~--------~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+-|++...+ +.. + ..-...|..+.|+++|+++++-
T Consensus 248 l~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsR 298 (460)
T COG5170 248 LNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSR 298 (460)
T ss_pred ehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEe
Confidence 999874321 111 1 1123468899999999998764
No 333
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.34 E-value=0.014 Score=36.57 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=50.7
Q ss_pred EEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 11 DFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 11 ~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
+|.+ +|++|+.++. ...+++.|+.+++....-.+. ........++|+.+.++.......|+-.|+++.+.
T Consensus 42 ~ft~-dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~------g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~ 114 (386)
T PF14583_consen 42 CFTD-DGRKLLFASDFDGNRNLYLLDLATGEITQLTDGP------GDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEE 114 (386)
T ss_dssp -B-T-TS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-------B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--E
T ss_pred CcCC-CCCEEEEEeccCCCcceEEEEcccCEEEECccCC------CCCccceEEecCCCeEEEEECCCeEEEEECCcCcE
Confidence 5667 5666655553 556888899888765544443 12233566788888776665667899999999887
Q ss_pred EEEeecccccEEEEEE--CCCCcEEE
Q psy17133 88 VHSMVAHLDAVTSLAV--DPQGLYIL 111 (116)
Q Consensus 88 ~~~~~~~~~~v~~~~~--~~~~~~l~ 111 (116)
...+......+-...| +.++..++
T Consensus 115 ~~vy~~p~~~~g~gt~v~n~d~t~~~ 140 (386)
T PF14583_consen 115 RVVYEVPDDWKGYGTWVANSDCTKLV 140 (386)
T ss_dssp EEEEE--TTEEEEEEEEE-TTSSEEE
T ss_pred EEEEECCcccccccceeeCCCccEEE
Confidence 6666655554444445 45666654
No 334
>KOG2444|consensus
Probab=97.34 E-value=0.0047 Score=35.72 Aligned_cols=94 Identities=14% Similarity=0.049 Sum_probs=56.5
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL 95 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 95 (116)
....+++|..++.+++|...-............ ......+..-.++.+.++++.++.++.|+++..+.+.....|.
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~----e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~ 144 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGE----ESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN 144 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhccc----ccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence 446788888999999998762211111111100 1112222222345688999999999999999888877766665
Q ss_pred -ccEEEEEECCCCcEEEee
Q psy17133 96 -DAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 96 -~~v~~~~~~~~~~~l~~~ 113 (116)
..+.....+..++.++.+
T Consensus 145 ~~~~e~~ivv~sd~~i~~a 163 (238)
T KOG2444|consen 145 FESGEELIVVGSDEFLKIA 163 (238)
T ss_pred CCCcceeEEecCCceEEee
Confidence 344444445555555544
No 335
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.33 E-value=0.012 Score=37.26 Aligned_cols=81 Identities=14% Similarity=0.040 Sum_probs=56.7
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-----------------CC-E
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-----------------LP-L 67 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------~~-~ 67 (116)
.+..+..+| ++.+.++...-|+|.++|+..+..++-+++.++. .+.-+..... .. +
T Consensus 309 ~~~~i~~sP-~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA-----qc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L 382 (415)
T PF14655_consen 309 EGESICLSP-SGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA-----QCGWIEVPEEGDRDRSNSNSPKSSSRFALFL 382 (415)
T ss_pred eEEEEEECC-CCCEEEEEcCCCcEEEEECCCChhhhhhccCccc-----eEEEEEeecccccccccccccCCCCcceEEE
Confidence 467889999 6788888878899999999999888888887542 1211111110 01 2
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 68 TITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 68 ~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
++-+-..|.|.+|.+++|..+..+.
T Consensus 383 vIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 383 VIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred EEEeccCCeEEEEecCCCCEEEEEE
Confidence 3445668899999999888776664
No 336
>KOG1275|consensus
Probab=97.32 E-value=0.01 Score=40.89 Aligned_cols=89 Identities=17% Similarity=0.213 Sum_probs=66.5
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133 17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD 96 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 96 (116)
+..++.|+--..+..+|+.+.+........ .+.+.-+ ..+++.+++|...|+|.+-|..+-+.++++..|.+
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~------a~~v~im--R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~ 218 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVS------ASGVTIM--RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG 218 (1118)
T ss_pred Ccceeecchhhheeeeecccceeeeeeecc------CCceEEE--EecCcEEEeecccceEEeecCCcCceeeeeecccc
Confidence 345555655556777788877665555444 2344444 34678999999999999999999999999999999
Q ss_pred cEEEEEECCCCcEEEeeec
Q psy17133 97 AVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 97 ~v~~~~~~~~~~~l~~~s~ 115 (116)
.+.++ +-.|+.|++++.
T Consensus 219 siSDf--Dv~GNlLitCG~ 235 (1118)
T KOG1275|consen 219 SISDF--DVQGNLLITCGY 235 (1118)
T ss_pred ceeee--eccCCeEEEeec
Confidence 88755 668889998874
No 337
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.32 E-value=0.0022 Score=43.52 Aligned_cols=60 Identities=10% Similarity=0.101 Sum_probs=44.8
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
...+|++|+.+|.|++||-...+....+++- ..+|..++.+.||+++++.+ +..|.+++.
T Consensus 587 ~~G~iavgs~~G~IRLyd~~g~~AKT~lp~l------G~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 587 EDGYIAVGSNKGDIRLYDRLGKRAKTALPGL------GDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred CCceEEEEeCCCcEEeecccchhhhhcCCCC------CCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 4468899999999999996543333344544 46899999999999887776 556667664
No 338
>KOG0882|consensus
Probab=97.30 E-value=0.0013 Score=41.44 Aligned_cols=87 Identities=15% Similarity=0.066 Sum_probs=62.9
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC------CceeEEEecCCc---CcCCCCceeEEEEcCCCCEEEEEe
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET------GKPVVRIDSSQF---GVSGGGGINRVVCHPTLPLTITAH 72 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~------~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~ 72 (116)
+|..+|..+.+.| -++.+++....|-|..|.... .+....++.... ..-..+...++.++|++..+.+.+
T Consensus 142 lH~sPV~~i~y~q-a~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~ 220 (558)
T KOG0882|consen 142 LHFSPVKKIRYNQ-AGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLN 220 (558)
T ss_pred cccCceEEEEeec-cccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccC
Confidence 4778899999999 788888888889999998762 111111111100 001134678999999999999999
Q ss_pred CCCeEEEEECCCCeEEE
Q psy17133 73 DDRHIRFFDNVSGKLVH 89 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~~ 89 (116)
.|..|+++..+++++++
T Consensus 221 ~DrkVR~F~~KtGklvq 237 (558)
T KOG0882|consen 221 PDRKVRGFVFKTGKLVQ 237 (558)
T ss_pred cccEEEEEEeccchhhh
Confidence 99999999999875443
No 339
>KOG2395|consensus
Probab=97.30 E-value=0.0037 Score=40.38 Aligned_cols=90 Identities=16% Similarity=0.262 Sum_probs=56.3
Q ss_pred EeeCCCeEEEEECCCC-c-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE-EEeecccccE
Q psy17133 22 TAFDNSACVLFDLETG-K-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV-HSMVAHLDAV 98 (116)
Q Consensus 22 ~~~~~~~v~i~~~~~~-~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~-~~~~~~~~~v 98 (116)
.|-.+..|.-||.+-. . .+...+.+... ......|++-..+| +++.++.+|.|++||- .++.. ..+.+-..+|
T Consensus 399 vGLs~n~vfriDpRv~~~~kl~~~q~kqy~--~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I 474 (644)
T KOG2395|consen 399 VGLSDNSVFRIDPRVQGKNKLAVVQSKQYS--TKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAI 474 (644)
T ss_pred EeecCCceEEecccccCcceeeeeeccccc--cccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCce
Confidence 3445778888998732 2 33333333220 01223344333333 7889999999999996 44433 3455667789
Q ss_pred EEEEECCCCcEEEeeec
Q psy17133 99 TSLAVDPQGLYILSGTY 115 (116)
Q Consensus 99 ~~~~~~~~~~~l~~~s~ 115 (116)
..+..+.+|++++..+.
T Consensus 475 ~hVdvtadGKwil~Tc~ 491 (644)
T KOG2395|consen 475 KHVDVTADGKWILATCK 491 (644)
T ss_pred eeEEeeccCcEEEEecc
Confidence 99999999999876653
No 340
>KOG4190|consensus
Probab=97.29 E-value=0.0015 Score=42.49 Aligned_cols=104 Identities=13% Similarity=0.232 Sum_probs=67.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEE-EEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTI-TAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~-~~~~d~~i~~ 79 (116)
|..+|.++.|.. +...+++ -|+.+++||.--++.+..+..... .+...-+..-+ +..++. .++...++++
T Consensus 783 Hkk~i~~igfL~-~lr~i~S--cD~giHlWDPFigr~Laq~~dapk----~~a~~~ikcl~nv~~~iliAgcsaeSTVKl 855 (1034)
T KOG4190|consen 783 HKKPIHDIGFLA-DLRSIAS--CDGGIHLWDPFIGRLLAQMEDAPK----EGAGGNIKCLENVDRHILIAGCSAESTVKL 855 (1034)
T ss_pred ccCcccceeeee-ccceeee--ccCcceeecccccchhHhhhcCcc----cCCCceeEecccCcchheeeeccchhhhee
Confidence 667788888876 4455554 478899999987776664432210 12222232223 334444 4467889999
Q ss_pred EECCCCeEEEEee-----cccccEEEEEECCCCcEEEee
Q psy17133 80 FDNVSGKLVHSMV-----AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+|.+.++....++ +..+.+++++..+.|++++.+
T Consensus 856 ~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~ 894 (1034)
T KOG4190|consen 856 FDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAA 894 (1034)
T ss_pred eecccccceeeEEeccCCCCchheeEEEeccCcchhhHH
Confidence 9998887666554 234568899999999987643
No 341
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.28 E-value=0.0056 Score=37.20 Aligned_cols=79 Identities=15% Similarity=0.179 Sum_probs=52.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----eeEEEecCCcCc------CCCCceeEEEEcCC-CC-EEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----PVVRIDSSQFGV------SGGGGINRVVCHPT-LP-LTITA 71 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~~------~~~~~i~~~~~~~~-~~-~~~~~ 71 (116)
..|+++.|.. .|.++++|...|+|.+|.-+... ...+|+.|.... .-...|..+.|..+ ++ .+...
T Consensus 27 d~ItaVefd~-tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 27 DKITAVEFDE-TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred ceeeEEEecc-ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 4688999987 78999999999999998765321 122344442210 11235677887754 43 56667
Q ss_pred eCCCeEEEEECCC
Q psy17133 72 HDDRHIRFFDNVS 84 (116)
Q Consensus 72 ~~d~~i~~~~~~~ 84 (116)
+.|.+|++|.+..
T Consensus 106 tNdktiKlWKiye 118 (460)
T COG5170 106 TNDKTIKLWKIYE 118 (460)
T ss_pred cCCceeeeeeeec
Confidence 7899999998754
No 342
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.24 E-value=0.014 Score=34.48 Aligned_cols=107 Identities=15% Similarity=0.186 Sum_probs=55.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCC---CceeEE--EecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLET---GKPVVR--IDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHI 77 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~---~~~~~~--~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i 77 (116)
+..+..++|+| ..+.++.+-+..-..+|.+.. ...+.. .............+.++.++|. +.+++....+..|
T Consensus 117 N~G~EGla~D~-~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l 195 (248)
T PF06977_consen 117 NKGFEGLAYDP-KTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLL 195 (248)
T ss_dssp SS--EEEEEET-TTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEE
T ss_pred CcceEEEEEcC-CCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeE
Confidence 44578899999 556666665554455555432 111111 1111000011345788999987 5566777778899
Q ss_pred EEEECCCCeEEEEeeccc---------ccEEEEEECCCCcEEEe
Q psy17133 78 RFFDNVSGKLVHSMVAHL---------DAVTSLAVDPQGLYILS 112 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~ 112 (116)
..+| .+|+.+..+.-.. ...-.++|.++|+..++
T Consensus 196 ~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv 238 (248)
T PF06977_consen 196 LELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV 238 (248)
T ss_dssp EEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE
T ss_pred EEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE
Confidence 9999 5587766654222 25789999999987665
No 343
>KOG2079|consensus
Probab=97.24 E-value=0.0055 Score=42.64 Aligned_cols=69 Identities=14% Similarity=0.204 Sum_probs=51.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
.++|++++|+. +|..++.|..+|.|.+||...++....+.-+.. . ...+..+.+..++..+.++...|.
T Consensus 130 ~~~Vtsvafn~-dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~a--p-~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 130 QGPVTSVAFNQ-DGSLLLAGLGDGHVTVWDMHRAKILKVITEHGA--P-VTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred CCcceeeEecC-CCceeccccCCCcEEEEEccCCcceeeeeecCC--c-cceEEEEEEeCCCcEEEEccCCCc
Confidence 47899999998 889999999999999999998888777764421 0 123445555566667777766665
No 344
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.19 E-value=0.0085 Score=38.35 Aligned_cols=80 Identities=18% Similarity=0.144 Sum_probs=45.4
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------
Q psy17133 17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG----------- 85 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~----------- 85 (116)
|..|+..+ ++.|.+||+++++.+.++... .+..+.|++++.+++..+.+ .+.+.+....
T Consensus 117 G~LL~~~~-~~~i~~yDw~~~~~i~~i~v~--------~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e 186 (443)
T PF04053_consen 117 GNLLGVKS-SDFICFYDWETGKLIRRIDVS--------AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVE 186 (443)
T ss_dssp SSSEEEEE-TTEEEEE-TTT--EEEEESS---------E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-G
T ss_pred CcEEEEEC-CCCEEEEEhhHcceeeEEecC--------CCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCch
Confidence 45666555 448999999999999998765 48999999999999888755 5555543311
Q ss_pred eEEEEeecccccEEEEEECCC
Q psy17133 86 KLVHSMVAHLDAVTSLAVDPQ 106 (116)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~~ 106 (116)
.....+......|.+.+|..+
T Consensus 187 ~~f~~~~E~~~~IkSg~W~~d 207 (443)
T PF04053_consen 187 DAFELIHEISERIKSGCWVED 207 (443)
T ss_dssp GGEEEEEEE-S--SEEEEETT
T ss_pred hceEEEEEecceeEEEEEEcC
Confidence 022222222446777777666
No 345
>KOG4640|consensus
Probab=97.17 E-value=0.004 Score=40.85 Aligned_cols=62 Identities=19% Similarity=0.219 Sum_probs=49.9
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEE-EEEECCCCcEEEeeecC
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVT-SLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~s~d 116 (116)
..+..+.|+|.-.++|.+..+|.+.++.+. -+.+.++.-+...++ +++|.|||+.|+.|=.|
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kd 83 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKD 83 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecC
Confidence 457889999999999999999999999887 556666664444555 99999999999987543
No 346
>KOG1832|consensus
Probab=97.17 E-value=0.0018 Score=44.37 Aligned_cols=62 Identities=18% Similarity=0.175 Sum_probs=56.2
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
....++++|+-+.+.++.|+-.|.|++++..+|.......+|...++.+.-+.+|..+++.+
T Consensus 1101 ~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1101 TALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred ccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeec
Confidence 56789999999999999999999999999999999999999999999999999998877644
No 347
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.17 E-value=0.018 Score=34.35 Aligned_cols=76 Identities=9% Similarity=0.143 Sum_probs=49.5
Q ss_pred EEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 10 IDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
++.+. +|+.|+. -.|..|.|-..++. ..+.+.....+. ...-..++|+||+.+++.+...|+|+++|+.. ..
T Consensus 3 ~~~~~-~Gk~lAi-~qd~~iEiRsa~Ddf~si~~kcqVpkD~---~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~ 76 (282)
T PF15492_consen 3 LALSS-DGKLLAI-LQDQCIEIRSAKDDFSSIIGKCQVPKDP---NPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SE 76 (282)
T ss_pred eeecC-CCcEEEE-EeccEEEEEeccCCchheeEEEecCCCC---CchheEEEECCCCcEEEEEcCCCeEEEEeccc-ce
Confidence 34455 6666665 44667777766543 233444333210 23467899999999999999999999999874 44
Q ss_pred EEEe
Q psy17133 88 VHSM 91 (116)
Q Consensus 88 ~~~~ 91 (116)
+..+
T Consensus 77 lf~I 80 (282)
T PF15492_consen 77 LFVI 80 (282)
T ss_pred eEEc
Confidence 4443
No 348
>KOG1920|consensus
Probab=97.12 E-value=0.051 Score=38.67 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=52.1
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
+.|.++.|.. +.+.++.+...|.+.+-|.++... ++.+.. .+.|.+++|+||+.+++......++.+-+
T Consensus 69 ~~i~s~~fl~-d~~~i~v~~~~G~iilvd~et~~~--eivg~v-----d~GI~aaswS~Dee~l~liT~~~tll~mT 137 (1265)
T KOG1920|consen 69 DEIVSVQFLA-DTNSICVITALGDIILVDPETLEL--EIVGNV-----DNGISAASWSPDEELLALITGRQTLLFMT 137 (1265)
T ss_pred cceEEEEEec-ccceEEEEecCCcEEEEcccccce--eeeeec-----cCceEEEeecCCCcEEEEEeCCcEEEEEe
Confidence 5788889988 678888888889999888776532 222222 35799999999999999888877776653
No 349
>KOG1275|consensus
Probab=97.10 E-value=0.02 Score=39.57 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=48.6
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---------CCeEEEEECCC
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------DRHIRFFDNVS 84 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------d~~i~~~~~~~ 84 (116)
++..+.+|...|.|.+-|..+.+.++++..| ++.+..++. .|.++++++. |..|++||++.
T Consensus 186 Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aH------s~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRm 255 (1118)
T KOG1275|consen 186 NNRNLFCGDTRGTVFLRDPNSFETIHTFDAH------SGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRM 255 (1118)
T ss_pred cCcEEEeecccceEEeecCCcCceeeeeecc------ccceeeeec--cCCeEEEeecccccccccccchhhhhhhhh
Confidence 5578888999999999999999999999999 566666544 5777777664 45688888764
No 350
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.03 E-value=0.012 Score=36.16 Aligned_cols=59 Identities=27% Similarity=0.378 Sum_probs=43.6
Q ss_pred eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEE-eCCCeEEEEECCCCeEEEEeec
Q psy17133 28 ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITA-HDDRHIRFFDNVSGKLVHSMVA 93 (116)
Q Consensus 28 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~-~~d~~i~~~~~~~~~~~~~~~~ 93 (116)
.|-++|+.+++.+.+++.. ..+.++.++.+.+ +|++. ..++.+.+||..+|+.++.+..
T Consensus 270 eVWv~D~~t~krv~Ri~l~-------~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLE-------HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEEETTTTEEEEEEEEE-------EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEEEECCCCeEEEEEeCC-------CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 4667788899989888764 3578999998754 66554 4579999999999999988763
No 351
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.02 E-value=0.023 Score=32.87 Aligned_cols=68 Identities=19% Similarity=0.185 Sum_probs=48.3
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 91 (116)
++..+++++.++.++.||..+|+.+..+..... .... . ...+..++.+..++.+..+|.++|+.+...
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~----~~~~--~--~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~ 102 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGP----ISGA--P--VVDGGRVYVGTSDGSLYALDAKTGKVLWSI 102 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSC----GGSG--E--EEETTEEEEEETTSEEEEEETTTSCEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeecccc----ccce--e--eecccccccccceeeeEecccCCcceeeee
Confidence 346677778899999999999998887775421 1111 1 223455666667889999999999998874
No 352
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.98 E-value=0.038 Score=34.78 Aligned_cols=100 Identities=18% Similarity=0.228 Sum_probs=70.4
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeEEEEECC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHIRFFDNV 83 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i~~~~~~ 83 (116)
...+..++...+..+....+..+.+.|..+.+........ .....++++|+++.++.+.. ++.+.+.|..
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG-------~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~ 148 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVG-------LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA 148 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeec-------cCCceEEECCCCCEEEEEecccCCceEEEEeCC
Confidence 3456777733335555556788999997776666665443 25678999999876666544 6899999999
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+.+..........+ ..++++|+|+.++.+.
T Consensus 149 t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~ 178 (381)
T COG3391 149 TNKVTATIPVGNTP-TGVAVDPDGNKVYVTN 178 (381)
T ss_pred CCeEEEEEecCCCc-ceEEECCCCCeEEEEe
Confidence 88888775433333 8899999999776543
No 353
>KOG4649|consensus
Probab=96.96 E-value=0.031 Score=33.40 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=63.8
Q ss_pred EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133 12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 91 (116)
..++.+.+++.++-.+.+.--|..+|+...+-... ..+.+-+.- -|.+++.++..+.+++-+.++|+....+
T Consensus 18 V~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg-------~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f 89 (354)
T KOG4649|consen 18 VCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILG-------VRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNF 89 (354)
T ss_pred EecCCceEEEEecCCceEEEecCCCCcEEeehhhC-------ceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeee
Confidence 34534466777788888888899888765443222 123332222 3677999999999999999999877766
Q ss_pred ecccccEEEEEECCCCcEEEeeecC
Q psy17133 92 VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 92 ~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.....--......+++..+..+++|
T Consensus 90 ~~~~~vk~~a~~d~~~glIycgshd 114 (354)
T KOG4649|consen 90 VILETVKVRAQCDFDGGLIYCGSHD 114 (354)
T ss_pred eehhhhccceEEcCCCceEEEecCC
Confidence 5332211234457788888777765
No 354
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=96.93 E-value=0.041 Score=34.35 Aligned_cols=67 Identities=22% Similarity=0.209 Sum_probs=47.6
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
..+++++.++.++.+|..+|+.+-...... ....... .++..++.++.++.+..+|..+|+.+....
T Consensus 66 ~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~------~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 132 (377)
T TIGR03300 66 GKVYAADADGTVVALDAETGKRLWRVDLDE------RLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAK 132 (377)
T ss_pred CEEEEECCCCeEEEEEccCCcEeeeecCCC------CcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeec
Confidence 567777888999999999998877665441 1111222 246677788889999999998888776543
No 355
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.93 E-value=0.017 Score=29.79 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=47.4
Q ss_pred ceEEEE---ccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 7 PTSIDF---VRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 7 v~~~~~---~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.++++ ..++.+.|++|++|..|++|+-. ..+.++... ..+..+.-... ..++.+-.+|+|-+|+-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~-------~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITET-------DKVTSLCSLGG-GRFAYALANGTVGVYDR 70 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecc-------cceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence 444444 44344789999999999999854 456666654 46777776655 55778888999999975
No 356
>KOG2114|consensus
Probab=96.88 E-value=0.075 Score=36.59 Aligned_cols=103 Identities=5% Similarity=0.044 Sum_probs=67.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECC---CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLE---TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
..++..++.+. +-+.++.|..+|.|..+.-. +......+. +.. ..+|+.+.+..+++.++.......|.+|
T Consensus 125 ~~p~s~l~Vs~-~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~-~~~----~~pITgL~~~~d~~s~lFv~Tt~~V~~y 198 (933)
T KOG2114|consen 125 PSPASSLAVSE-DLKTIVCGFTNGLVICYKGDILRDRGSRQDYS-HRG----KEPITGLALRSDGKSVLFVATTEQVMLY 198 (933)
T ss_pred CCcceEEEEEc-cccEEEEEecCcEEEEEcCcchhccccceeee-ccC----CCCceeeEEecCCceeEEEEecceeEEE
Confidence 45677788887 67889999999999988532 111112221 211 4689999999888764444456678999
Q ss_pred ECCCCe-EEEEeecccccEEEEEECCCCcEEEe
Q psy17133 81 DNVSGK-LVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.+.... ....+..+...+.+..|++....++.
T Consensus 199 ~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIc 231 (933)
T KOG2114|consen 199 SLSGRTPSLKVLDNNGISLNCSSFSDGTYQFIC 231 (933)
T ss_pred EecCCCcceeeeccCCccceeeecCCCCccEEE
Confidence 887433 24445566667788888775553333
No 357
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.82 E-value=0.074 Score=35.71 Aligned_cols=93 Identities=12% Similarity=0.160 Sum_probs=60.5
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc--CCCCEEEEEeCCCeEEEEECC-----C-C---
Q psy17133 17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH--PTLPLTITAHDDRHIRFFDNV-----S-G--- 85 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~d~~i~~~~~~-----~-~--- 85 (116)
++..++.+....+.|||...+....+-.-.. ...|..++|. |++..+.+.+-.+.|.++.-. . +
T Consensus 41 ~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~-----~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w 115 (631)
T PF12234_consen 41 KKIAVVDSSRSELTIWDTRSGVLEYEESFSE-----DDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSW 115 (631)
T ss_pred CcEEEEECCCCEEEEEEcCCcEEEEeeeecC-----CCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCccc
Confidence 3455555567789999998765333222111 3678999887 678888888888898888531 1 1
Q ss_pred eEEEEe--eccc-ccEEEEEECCCCcEEEeee
Q psy17133 86 KLVHSM--VAHL-DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 86 ~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~s 114 (116)
..++.+ ..+. .+|.+..|.++|..++.++
T Consensus 116 ~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG 147 (631)
T PF12234_consen 116 APIRKIDISSHTPHPIGDSIWLKDGTLVVGSG 147 (631)
T ss_pred ceeEEEEeecCCCCCccceeEecCCeEEEEeC
Confidence 122222 2233 5788999999998877554
No 358
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.55 E-value=0.09 Score=33.14 Aligned_cols=99 Identities=20% Similarity=0.262 Sum_probs=67.2
Q ss_pred CceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFD 81 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~ 81 (116)
....+.++| +++.+.++.. +..+.+.|..+++........ .. ...++++|++..++... .++.+.+.|
T Consensus 117 ~P~~~~~~~-~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG------~~-P~~~a~~p~g~~vyv~~~~~~~v~vi~ 188 (381)
T COG3391 117 GPVGLAVDP-DGKYVYVANAGNGNNTVSVIDAATNKVTATIPVG------NT-PTGVAVDPDGNKVYVTNSDDNTVSVID 188 (381)
T ss_pred CCceEEECC-CCCEEEEEecccCCceEEEEeCCCCeEEEEEecC------CC-cceEEECCCCCeEEEEecCCCeEEEEe
Confidence 456788999 5555554443 688999999888877775443 22 38899999998665554 689999999
Q ss_pred CCCCeEEE-E---eecccccEEEEEECCCCcEEEe
Q psy17133 82 NVSGKLVH-S---MVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 82 ~~~~~~~~-~---~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.......+ . ..........+.++|++..+..
T Consensus 189 ~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV 223 (381)
T COG3391 189 TSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYV 223 (381)
T ss_pred CCCcceeccccccccccCCCCceEEECCCCCEEEE
Confidence 77665553 1 0112223466788999986654
No 359
>KOG2377|consensus
Probab=96.51 E-value=0.075 Score=34.36 Aligned_cols=103 Identities=13% Similarity=0.119 Sum_probs=61.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
-..|+|.++.|++ +.+.+++--.+..|.+.+....+... ..++... +..|.+.+|..+.. ++.....| +-+
T Consensus 64 ~d~G~I~SIkFSl-DnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k----~~~IlGF~W~~s~e-~A~i~~~G-~e~ 136 (657)
T KOG2377|consen 64 DDKGEIKSIKFSL-DNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTK----NANILGFCWTSSTE-IAFITDQG-IEF 136 (657)
T ss_pred cCCCceeEEEecc-CcceEEEEecCceEEEEecCCCchhhHHHHHhccC----cceeEEEEEecCee-EEEEecCC-eEE
Confidence 3468999999999 77888888889999999874322211 1122211 34588899987643 33333222 233
Q ss_pred EECC-CCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 80 FDNV-SGKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 80 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
|... ..+.++..+.+...|.-..|.++.+.+.
T Consensus 137 y~v~pekrslRlVks~~~nvnWy~yc~et~v~L 169 (657)
T KOG2377|consen 137 YQVLPEKRSLRLVKSHNLNVNWYMYCPETAVIL 169 (657)
T ss_pred EEEchhhhhhhhhhhcccCccEEEEccccceEe
Confidence 3322 2333444445556677777777766543
No 360
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.48 E-value=0.088 Score=32.19 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=54.0
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE-CC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD-NV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~-~~ 83 (116)
+.+..+.-++ ++.+++++....-+.-|+.-...-...-... +..+..+.|.|++.+...+ ..+.++.=+ ..
T Consensus 145 gs~~~~~r~~-dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~------~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~ 216 (302)
T PF14870_consen 145 GSINDITRSS-DGRYVAVSSRGNFYSSWDPGQTTWQPHNRNS------SRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPD 216 (302)
T ss_dssp --EEEEEE-T-TS-EEEEETTSSEEEEE-TT-SS-EEEE--S------SS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TT
T ss_pred ceeEeEEECC-CCcEEEEECcccEEEEecCCCccceEEccCc------cceehhceecCCCCEEEEe-CCcEEEEccCCC
Confidence 4566777777 7788877765555556775322111121222 4579999999998876654 778888777 22
Q ss_pred CCeEEEE-ee---cccccEEEEEECCCCcEEEeeec
Q psy17133 84 SGKLVHS-MV---AHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 84 ~~~~~~~-~~---~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
..+.... +. ...-.+..++|.++....++|+.
T Consensus 217 ~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~ 252 (302)
T PF14870_consen 217 DGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS 252 (302)
T ss_dssp EEEEE---B-TTSS--S-EEEEEESSSS-EEEEEST
T ss_pred CccccccccCCcccCceeeEEEEecCCCCEEEEeCC
Confidence 2222221 11 12234789999998888777653
No 361
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.47 E-value=0.039 Score=34.90 Aligned_cols=58 Identities=16% Similarity=0.193 Sum_probs=39.2
Q ss_pred eeEEEEcCCCCEEEEE-eCC----CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 56 INRVVCHPTLPLTITA-HDD----RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 56 i~~~~~~~~~~~~~~~-~~d----~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+....++|++++++.+ +.. ..++++|+++|+.+....... ....+.|.++++.|+-..
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~ 188 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTR 188 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEE
Confidence 3467889999977654 322 459999999998765432111 123399999988876544
No 362
>KOG2395|consensus
Probab=96.44 E-value=0.024 Score=36.93 Aligned_cols=60 Identities=15% Similarity=0.137 Sum_probs=44.9
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
+..++++|+.+|.|++||-...+....+++- ...|..+..+.+|++++..+ +.++.+.++
T Consensus 440 ~sG~IvvgS~~GdIRLYdri~~~AKTAlPgL------G~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 440 ESGYIVVGSLKGDIRLYDRIGRRAKTALPGL------GDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred CCceEEEeecCCcEEeehhhhhhhhhccccc------CCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 4568899999999999998433444455655 46799999999999887765 456666654
No 363
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=96.36 E-value=0.11 Score=32.12 Aligned_cols=105 Identities=19% Similarity=0.269 Sum_probs=55.6
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce---eEEEecCCcCcCCCCceeEEEEcCC---CCEEE-EEeC----
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP---VVRIDSSQFGVSGGGGINRVVCHPT---LPLTI-TAHD---- 73 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~-~~~~---- 73 (116)
..++.++|.| ++.+++ +...+.|++++ .++.. +..+. ............++++|+ ...++ ....
T Consensus 2 ~~P~~~a~~p-dG~l~v-~e~~G~i~~~~-~~g~~~~~v~~~~--~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~ 76 (331)
T PF07995_consen 2 NNPRSMAFLP-DGRLLV-AERSGRIWVVD-KDGSLKTPVADLP--EVFADGERGLLGIAFHPDFASNGYLYVYYTNADED 76 (331)
T ss_dssp SSEEEEEEET-TSCEEE-EETTTEEEEEE-TTTEECEEEEE-T--TTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TS
T ss_pred CCceEEEEeC-CCcEEE-EeCCceEEEEe-CCCcCcceecccc--cccccccCCcccceeccccCCCCEEEEEEEcccCC
Confidence 3578999999 666655 46699999999 44443 22221 111112456899999994 23333 3221
Q ss_pred --C--CeEEEEECCCC-------eEE-EEeec---ccccEEEEEECCCCcEEEeee
Q psy17133 74 --D--RHIRFFDNVSG-------KLV-HSMVA---HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 74 --d--~~i~~~~~~~~-------~~~-~~~~~---~~~~v~~~~~~~~~~~l~~~s 114 (116)
. ..|.-|....+ +.+ ..+.. ..+....+.|.|||.+.++.+
T Consensus 77 ~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G 132 (331)
T PF07995_consen 77 GGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVG 132 (331)
T ss_dssp SSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB
T ss_pred CCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeC
Confidence 1 23444444333 111 11122 234567799999997766654
No 364
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.33 E-value=0.11 Score=31.84 Aligned_cols=60 Identities=17% Similarity=0.161 Sum_probs=39.6
Q ss_pred CceeEEEEcCCCCEEEEEeC---------CCeEEEEECC-CCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 54 GGINRVVCHPTLPLTITAHD---------DRHIRFFDNV-SGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~---------d~~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
...+.....|+|.+.++... ...-.+|.+. .+..++....+-...+.++||||++.|+.+
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~a 180 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVA 180 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEE
Confidence 45678899999997776443 1122444444 466666665545566889999999877643
No 365
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.32 E-value=0.17 Score=33.74 Aligned_cols=107 Identities=7% Similarity=-0.007 Sum_probs=63.1
Q ss_pred CCCceEEEEccCC----CcEEEEeeCCCeEEEEECC-----CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133 4 NGTPTSIDFVRDE----STKMVTAFDNSACVLFDLE-----TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD 74 (116)
Q Consensus 4 ~~~v~~~~~~~~~----~~~l~~~~~~~~v~i~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 74 (116)
-..|.++.|.|-. ..+|++- -...|.+|.+. .++.+..-.++... ...--.....|+|....++.....
T Consensus 56 FEhV~GlsW~P~~~~~~paLLAVQ-HkkhVtVWqL~~s~~e~~K~l~sQtcEi~e-~~pvLpQGCVWHPk~~iL~VLT~~ 133 (671)
T PF15390_consen 56 FEHVHGLSWAPPCTADTPALLAVQ-HKKHVTVWQLCPSTTERNKLLMSQTCEIRE-PFPVLPQGCVWHPKKAILTVLTAR 133 (671)
T ss_pred cceeeeeeecCcccCCCCceEEEe-ccceEEEEEeccCccccccceeeeeeeccC-CcccCCCcccccCCCceEEEEecC
Confidence 3567889998841 2344444 36689999876 22222222222100 001112456799999888877665
Q ss_pred CeEEEEECC--CCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 75 RHIRFFDNV--SGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 75 ~~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
..-.+++++ +.+....+. ..+.|.+.+|.+||+.|+.+
T Consensus 134 dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVA 173 (671)
T PF15390_consen 134 DVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVA 173 (671)
T ss_pred ceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEE
Confidence 555555554 333333343 56789999999999988754
No 366
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.30 E-value=0.2 Score=34.39 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=48.0
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCC----------CceeE---EEecCCc--CcCCCCceeEEEEcCC---CCE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLET----------GKPVV---RIDSSQF--GVSGGGGINRVVCHPT---LPL 67 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~----------~~~~~---~~~~~~~--~~~~~~~i~~~~~~~~---~~~ 67 (116)
.|..+..+| +|..++..+..+ |.|..+.. ++... .+..... .......|..+.|+|. +..
T Consensus 86 ~v~~i~~n~-~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 86 EVHQISLNP-TGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eEEEEEECC-CCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 467788899 778877777544 44433321 11111 1110000 0022456889999996 579
Q ss_pred EEEEeCCCeEEEEECCCC
Q psy17133 68 TITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 68 ~~~~~~d~~i~~~~~~~~ 85 (116)
++....|+.+++||+...
T Consensus 164 l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDP 181 (717)
T ss_pred EEEEecCCEEEEEecCCC
Confidence 999999999999998643
No 367
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.29 E-value=0.18 Score=33.81 Aligned_cols=103 Identities=9% Similarity=0.006 Sum_probs=54.3
Q ss_pred CceEEEEccCCCcEEEEeeCC-CeEEEEECCCCceeEEEecCCcC--cCCCCceeEEEEcCCCCEEEEEeCCCeEEE---
Q psy17133 6 TPTSIDFVRDESTKMVTAFDN-SACVLFDLETGKPVVRIDSSQFG--VSGGGGINRVVCHPTLPLTITAHDDRHIRF--- 79 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~-~~v~i~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~--- 79 (116)
....-.|+| ++..+.+.... ...++.+......+..+...... ....+.|..+.|+|||..++... ++.|.+
T Consensus 398 ~~t~PsWsp-DG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~V 475 (591)
T PRK13616 398 SLTRPSWSL-DADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVV 475 (591)
T ss_pred CCCCceECC-CCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEE
Confidence 356778999 66666555432 22223222211122211110000 00134699999999999777665 467777
Q ss_pred EECCCCeEEEE-----eec-ccccEEEEEECCCCcEEE
Q psy17133 80 FDNVSGKLVHS-----MVA-HLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 80 ~~~~~~~~~~~-----~~~-~~~~v~~~~~~~~~~~l~ 111 (116)
-....|+ ... +.. ....+..+.|..++..++
T Consensus 476 vr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V 512 (591)
T PRK13616 476 EQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDSLVV 512 (591)
T ss_pred EeCCCCc-eeecccEEeecccCCccccceEecCCEEEE
Confidence 4444454 111 221 223357889999988553
No 368
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=96.23 E-value=0.18 Score=33.29 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=28.5
Q ss_pred ceeEEEEcC----CCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133 55 GINRVVCHP----TLPLTITAHDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 55 ~i~~~~~~~----~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 91 (116)
....+.+++ +..++++.+.|+.+++||+.+++++...
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 455666666 6779999999999999999999986654
No 369
>PRK10115 protease 2; Provisional
Probab=96.07 E-value=0.27 Score=33.66 Aligned_cols=97 Identities=13% Similarity=-0.025 Sum_probs=54.8
Q ss_pred ceEEEEccCCCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C-----C
Q psy17133 7 PTSIDFVRDESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D-----R 75 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d-----~ 75 (116)
+..+.++| ++++|+.+.+ ...+++.|+.++..+...... .-..++|.+|++.++.... + .
T Consensus 129 l~~~~~Sp-dg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~--------~~~~~~w~~D~~~~~y~~~~~~~~~~~ 199 (686)
T PRK10115 129 LGGMAITP-DNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN--------VEPSFVWANDSWTFYYVRKHPVTLLPY 199 (686)
T ss_pred EeEEEECC-CCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC--------cceEEEEeeCCCEEEEEEecCCCCCCC
Confidence 45678899 6777776532 345778888877533222111 1245899999875554432 2 4
Q ss_pred eEEEEECCCC--eEEEEeecccccEE-EEEECCCCcEEEe
Q psy17133 76 HIRFFDNVSG--KLVHSMVAHLDAVT-SLAVDPQGLYILS 112 (116)
Q Consensus 76 ~i~~~~~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~ 112 (116)
.++.+++.++ +....+........ ....+.++++++.
T Consensus 200 ~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i 239 (686)
T PRK10115 200 QVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVI 239 (686)
T ss_pred EEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEE
Confidence 6888888877 33333332222222 2333447776653
No 370
>KOG0309|consensus
Probab=96.00 E-value=0.02 Score=38.83 Aligned_cols=94 Identities=12% Similarity=0.234 Sum_probs=61.0
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~~ 84 (116)
...++|+..+++.+++ +....+.+||...+ .++..++++ ...++.++|..- ...+.+.+.|++|+.|+...
T Consensus 161 asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~pl~s~K~~------vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k 233 (1081)
T KOG0309|consen 161 ASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGSTPLCSLKGH------VSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK 233 (1081)
T ss_pred CceeeecccCcchhhh-ccCCceEEEeccCCCcceEEeccc------ceeeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence 3457787655555554 44567999999854 577888887 567888888754 44677888999999999864
Q ss_pred CeEEEE-eecccccEEEEEECCCC
Q psy17133 85 GKLVHS-MVAHLDAVTSLAVDPQG 107 (116)
Q Consensus 85 ~~~~~~-~~~~~~~v~~~~~~~~~ 107 (116)
...... ...-..++..-.+-|-|
T Consensus 234 St~e~~~~vtt~~piw~~r~~Pfg 257 (1081)
T KOG0309|consen 234 STTESKRTVTTNFPIWRGRYLPFG 257 (1081)
T ss_pred cccccceeccccCcceeccccccC
Confidence 322111 11123345555555533
No 371
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=95.93 E-value=0.23 Score=31.76 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=37.9
Q ss_pred eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 28 ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 28 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
.|.+|+.. |+.+..+... .+.+..+.|..+..++ ....||.++++|+.
T Consensus 62 ~I~iys~s-G~ll~~i~w~------~~~iv~~~wt~~e~Lv-vV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWD------SGRIVGMGWTDDEELV-VVQSDGTVRVYDLF 109 (410)
T ss_pred EEEEECCC-CCEeEEEEEC------CCCEEEEEECCCCeEE-EEEcCCEEEEEeCC
Confidence 58888875 7788887766 4689999998866555 55589999999986
No 372
>KOG2114|consensus
Probab=95.91 E-value=0.078 Score=36.53 Aligned_cols=95 Identities=11% Similarity=0.121 Sum_probs=58.9
Q ss_pred EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-----eEEEEECCCC-
Q psy17133 12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-----HIRFFDNVSG- 85 (116)
Q Consensus 12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-----~i~~~~~~~~- 85 (116)
|++ ++..++.|+.+|.|.+++.. -+.+..|+.+. .+.+..+....+..++++.++|. .+++|+++..
T Consensus 31 ~~s-~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~-----~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 31 CSS-STGSVVIGTADGRVVILNSS-FQLIRGFQAYE-----QSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred EcC-CCceEEEeeccccEEEeccc-ceeeehheecc-----hhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 466 67888999999999888753 44456777662 12255554444446777766653 5999998632
Q ss_pred -----eEE---EEee----cccccEEEEEECCCCcEEEee
Q psy17133 86 -----KLV---HSMV----AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 86 -----~~~---~~~~----~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.++ +.+. ....++..++.+.+-+.++.|
T Consensus 104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~G 143 (933)
T KOG2114|consen 104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCG 143 (933)
T ss_pred CCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEE
Confidence 122 1111 123466777777776766655
No 373
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.84 E-value=0.17 Score=29.50 Aligned_cols=72 Identities=13% Similarity=0.097 Sum_probs=47.5
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEE------ecC-C-cCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRI------DSS-Q-FGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~------~~~-~-~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
+++++++-..+|.+++||+.+++.+..- -.. . ........|..+.++.+|..+++-+ ++..+.|+..-+.-
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~~W 99 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLGCW 99 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccccee
Confidence 5578888899999999999977653321 000 0 0001245688889998898777765 46778888664443
Q ss_pred E
Q psy17133 88 V 88 (116)
Q Consensus 88 ~ 88 (116)
+
T Consensus 100 ~ 100 (219)
T PF07569_consen 100 I 100 (219)
T ss_pred E
Confidence 3
No 374
>KOG1008|consensus
Probab=95.83 E-value=0.0011 Score=43.56 Aligned_cols=105 Identities=21% Similarity=0.275 Sum_probs=66.6
Q ss_pred CCCCceEEEEccCCCcEEEEee----CCCeEEEEECCCC--cee--EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAF----DNSACVLFDLETG--KPV--VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~----~~~~v~i~~~~~~--~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 74 (116)
+....++++|++-+.+.|+.|- .+..+.|||..++ .+. ..|.... .....+++|-.+.+++.+|...
T Consensus 101 ~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~-----l~gqns~cwlrd~klvlaGm~s 175 (783)
T KOG1008|consen 101 YARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSST-----LDGQNSVCWLRDTKLVLAGMTS 175 (783)
T ss_pred ccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccccccccc-----ccCccccccccCcchhhccccc
Confidence 3456788999887777888775 3567999999865 221 1222211 2345688998888999999989
Q ss_pred CeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEee
Q psy17133 75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSG 113 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 113 (116)
..+.++|++........ -....++.+..+| .+.++++-
T Consensus 176 r~~~ifdlRqs~~~~~s-vnTk~vqG~tVdp~~~nY~cs~ 214 (783)
T KOG1008|consen 176 RSVHIFDLRQSLDSVSS-VNTKYVQGITVDPFSPNYFCSN 214 (783)
T ss_pred chhhhhhhhhhhhhhhh-hhhhhcccceecCCCCCceecc
Confidence 99999998732211111 1223455566666 55566543
No 375
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=95.77 E-value=0.26 Score=31.16 Aligned_cols=28 Identities=7% Similarity=0.223 Sum_probs=22.9
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 65 LPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
+..++.++.++.+...|..+|+.+....
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG~~~~~~~ 362 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDGRFVAQQK 362 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 4467778889999999999999877665
No 376
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.74 E-value=0.2 Score=29.76 Aligned_cols=99 Identities=17% Similarity=0.183 Sum_probs=58.9
Q ss_pred CceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE-
Q psy17133 6 TPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD- 81 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~- 81 (116)
.+...+.++ +++.++... ....++++.. +........ ...+....|++++...+....+...+++.
T Consensus 25 ~~~s~AvS~-dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~~-------g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~ 94 (253)
T PF10647_consen 25 DVTSPAVSP-DGSRVAAVSEGDGGRSLYVGPA--GGPVRPVLT-------GGSLTRPSWDPDGWVWTVDDGSGGVRVVRD 94 (253)
T ss_pred cccceEECC-CCCeEEEEEEcCCCCEEEEEcC--CCcceeecc-------CCccccccccCCCCEEEEEcCCCceEEEEe
Confidence 577888999 566554433 3444555543 333333221 23578888999988777766666666664
Q ss_pred CCCCeEEE-Eee--cccccEEEEEECCCCcEEEeee
Q psy17133 82 NVSGKLVH-SMV--AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 82 ~~~~~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~s 114 (116)
..++.... ... .....|..+.++|||..++...
T Consensus 95 ~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~ 130 (253)
T PF10647_consen 95 SASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVV 130 (253)
T ss_pred cCCCcceeEEecccccCCceEEEEECCCCcEEEEEE
Confidence 33333221 121 1122799999999999877543
No 377
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.72 E-value=0.26 Score=30.72 Aligned_cols=85 Identities=12% Similarity=0.072 Sum_probs=53.6
Q ss_pred CCceEEEEccCCCcEEEEee----------CCCeEEEEECCCCceeEEEecC---CcCcCCCCceeEEEEcCCCCEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAF----------DNSACVLFDLETGKPVVRIDSS---QFGVSGGGGINRVVCHPTLPLTITA 71 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (116)
+..-.+..+| +++.+.++. ....|.+||..+-.+..++.-. +.. .......+.++.++++++..
T Consensus 36 g~~~~~~~sp-dgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~--~~~~~~~~~ls~dgk~~~V~ 112 (342)
T PF06433_consen 36 GFLGNVALSP-DGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ--VVPYKNMFALSADGKFLYVQ 112 (342)
T ss_dssp ESSEEEEE-T-TSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B----BS--GGGEEE-TTSSEEEEE
T ss_pred ccCCceeECC-CCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe--ecccccceEEccCCcEEEEE
Confidence 3445577888 667666532 2346899999988777765432 110 01123456888999987765
Q ss_pred e--CCCeEEEEECCCCeEEEEee
Q psy17133 72 H--DDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 72 ~--~d~~i~~~~~~~~~~~~~~~ 92 (116)
. -...|.+.|++.++.+..+.
T Consensus 113 N~TPa~SVtVVDl~~~kvv~ei~ 135 (342)
T PF06433_consen 113 NFTPATSVTVVDLAAKKVVGEID 135 (342)
T ss_dssp EESSSEEEEEEETTTTEEEEEEE
T ss_pred ccCCCCeEEEEECCCCceeeeec
Confidence 4 45789999999888777654
No 378
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.65 E-value=0.25 Score=30.11 Aligned_cols=103 Identities=13% Similarity=0.148 Sum_probs=65.7
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+..+.++.|+| +.+.|++........++=...|+.+.+++-.. -.....+.+--++.++++--.+..+.++.+.
T Consensus 85 ~~nvS~LTynp-~~rtLFav~n~p~~iVElt~~GdlirtiPL~g-----~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd 158 (316)
T COG3204 85 TANVSSLTYNP-DTRTLFAVTNKPAAIVELTKEGDLIRTIPLTG-----FSDPETIEYIGGNQFVIVDERDRALYLFTVD 158 (316)
T ss_pred cccccceeeCC-CcceEEEecCCCceEEEEecCCceEEEecccc-----cCChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence 34588999999 56666665555555555445688888876542 1345667777778888877778888888765
Q ss_pred CCeEEE-------Ee---ecccccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVH-------SM---VAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~-------~~---~~~~~~v~~~~~~~~~~~l~~ 112 (116)
...... .+ .........++|+|....|..
T Consensus 159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~ 197 (316)
T COG3204 159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFV 197 (316)
T ss_pred CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEE
Confidence 431111 11 111445778999997766654
No 379
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=95.64 E-value=0.2 Score=28.97 Aligned_cols=73 Identities=15% Similarity=0.087 Sum_probs=49.1
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA 93 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 93 (116)
..++++..++.++.+|..+|+.+... ...... ...........++..++.+..++.+..+|.++|+.+.....
T Consensus 77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPP---AGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCT---CSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred cccccccceeeeEecccCCcceeeeeccccccc---cccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeec
Confidence 55666667779999999999988774 332110 11112222222377888888899999999999999877654
No 380
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.54 E-value=0.28 Score=29.95 Aligned_cols=95 Identities=15% Similarity=0.230 Sum_probs=60.6
Q ss_pred EEccCCCcEEEEeeC-----CCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC------C----
Q psy17133 11 DFVRDESTKMVTAFD-----NSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------D---- 74 (116)
Q Consensus 11 ~~~~~~~~~l~~~~~-----~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------d---- 74 (116)
.|+| ++.+|...-. .+.|-+||...+ +.+.++..+ .-....+.+.+||+.++.+.. |
T Consensus 120 vfs~-dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~------GiGpHev~lm~DGrtlvvanGGIethpdfgR~ 192 (366)
T COG3490 120 VFSP-DGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTH------GIGPHEVTLMADGRTLVVANGGIETHPDFGRT 192 (366)
T ss_pred ccCC-CCcEEEeecCCCCCCCceEEEEecccccceecccccC------CcCcceeEEecCCcEEEEeCCceecccccCcc
Confidence 4777 6676665432 356788998743 456777777 345778999999998887654 1
Q ss_pred --------CeEEEEECCCCeEEEEe--e--cccccEEEEEECCCCcEEEe
Q psy17133 75 --------RHIRFFDNVSGKLVHSM--V--AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 75 --------~~i~~~~~~~~~~~~~~--~--~~~~~v~~~~~~~~~~~l~~ 112 (116)
-.+.+.|-.+|.++.+. . .+...++.+...+||..++.
T Consensus 193 ~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfg 242 (366)
T COG3490 193 ELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFG 242 (366)
T ss_pred ccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEE
Confidence 12444554555554332 2 23346788888888877654
No 381
>KOG3630|consensus
Probab=95.50 E-value=0.084 Score=37.67 Aligned_cols=98 Identities=5% Similarity=-0.045 Sum_probs=63.7
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 85 (116)
..++.|+|.=....++...|+.|++..+.-. +.+..++. ....++++|+|.|+.++.+-..|++.-|... .
T Consensus 158 ~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~-------t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-l 229 (1405)
T KOG3630|consen 158 QLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPV-------TNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-L 229 (1405)
T ss_pred cccccccCCccchhhhhccccchhhhhhhhhhhhhcccCc-------ccceeeEEeccccceeeEecCCCeEEEeecc-c
Confidence 3456677632334455566777777665422 22223332 2468999999999999999999999988754 3
Q ss_pred eEEEEeec----ccccEEEEEECCCCcEEEe
Q psy17133 86 KLVHSMVA----HLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 86 ~~~~~~~~----~~~~v~~~~~~~~~~~l~~ 112 (116)
+....+.. ...+|.+++|-....+++.
T Consensus 230 eik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 230 EIKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred ceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 33333321 2367899999888777764
No 382
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.48 E-value=0.35 Score=30.68 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=44.6
Q ss_pred EEEccCCCcEEEEee-----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133 10 IDFVRDESTKMVTAF-----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---------- 74 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---------- 74 (116)
--|.| +|..+..-+ .+..|.-++..+++........ ...-+-.++|+++++-=+.|
T Consensus 243 Efw~~-DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p--------~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~ 313 (386)
T PF14583_consen 243 EFWVP-DGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMP--------WCSHFMSSPDGKLFVGDGGDAPVDVADAGG 313 (386)
T ss_dssp EEE-T-TSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE---------SEEEEEE-TTSSEEEEEE------------
T ss_pred ccccC-CCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCC--------ceeeeEEcCCCCEEEecCCCCCcccccccc
Confidence 34677 556554422 2334666777776543322222 23345556888887663333
Q ss_pred ------CeEEEEECCCCeEEEEee---------cccc-cEEEEEECCCCcEEEeee
Q psy17133 75 ------RHIRFFDNVSGKLVHSMV---------AHLD-AVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 75 ------~~i~~~~~~~~~~~~~~~---------~~~~-~v~~~~~~~~~~~l~~~s 114 (116)
-.|.+++++.+....... ++.. .=-...|+||+++++-.|
T Consensus 314 ~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~S 369 (386)
T PF14583_consen 314 YKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRS 369 (386)
T ss_dssp -------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE
T ss_pred ceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEEC
Confidence 256778887766533222 1111 124678999999987554
No 383
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=95.41 E-value=0.32 Score=30.74 Aligned_cols=66 Identities=11% Similarity=0.146 Sum_probs=44.9
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCcee-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGIN-RVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
..++.++.++.++.+|.++|+.+-+.+... .+. ...+ .+..++.+..++.+..+|.++|+.+....
T Consensus 121 ~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-------~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 187 (394)
T PRK11138 121 GKVYIGSEKGQVYALNAEDGEVAWQTKVAG-------EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVN 187 (394)
T ss_pred CEEEEEcCCCEEEEEECCCCCCcccccCCC-------ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence 456667778899999999998877665431 111 1111 13456667778899999999998876654
No 384
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.38 E-value=0.077 Score=22.47 Aligned_cols=31 Identities=16% Similarity=0.176 Sum_probs=25.2
Q ss_pred ceeEEEEcCCC---CEEEEEeCCCeEEEEECCCC
Q psy17133 55 GINRVVCHPTL---PLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 55 ~i~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~ 85 (116)
.+.++.|+|+. .+++.+-..+.+.++|+++.
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 47889999864 48888888899999999853
No 385
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=95.32 E-value=0.073 Score=21.84 Aligned_cols=40 Identities=13% Similarity=0.168 Sum_probs=26.9
Q ss_pred CCCCEEEEEe-CCCeEEEEECCCCeEEEEeecccccEEEEEE
Q psy17133 63 PTLPLTITAH-DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAV 103 (116)
Q Consensus 63 ~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 103 (116)
|+++.++.+. .++.|.++|..+++.+..+.. ......++|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence 5666555544 578999999998888777664 233445554
No 386
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=95.12 E-value=0.49 Score=30.32 Aligned_cols=55 Identities=9% Similarity=0.055 Sum_probs=40.4
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-cccEEEEEECCCCc
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGL 108 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 108 (116)
+.+..++++|+++++|.-..+|.+.+....-.+.+..+... ......|.|.-+.-
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 57999999999999999999999999876655554444422 34566777766543
No 387
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=95.09 E-value=0.73 Score=32.08 Aligned_cols=100 Identities=7% Similarity=0.078 Sum_probs=62.1
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCce----eEEEe-cCCcC----cCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP----VVRID-SSQFG----VSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~----~~~~~-~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
+..+++|+|.+...++.....|...+|++..... ...+. ...+. ......-..+.|.++...++.++ ...
T Consensus 147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~-r~~ 225 (765)
T PF10214_consen 147 PHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN-RSK 225 (765)
T ss_pred ccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc-CCc
Confidence 4578999998888999999999999999931111 11111 11000 00112334788887766666664 567
Q ss_pred EEEEECCCCeEEE-Ee-ecccccEEEEEECCC
Q psy17133 77 IRFFDNVSGKLVH-SM-VAHLDAVTSLAVDPQ 106 (116)
Q Consensus 77 i~~~~~~~~~~~~-~~-~~~~~~v~~~~~~~~ 106 (116)
+.++|+++..... .. ......+.++.-+|.
T Consensus 226 l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~ 257 (765)
T PF10214_consen 226 LMLIDFESNWQTEYLVTAKTWSWILDVKRSPD 257 (765)
T ss_pred eEEEECCCCCccchhccCCChhheeeEEecCC
Confidence 8889998776533 22 223457888877776
No 388
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.05 E-value=0.51 Score=30.13 Aligned_cols=78 Identities=9% Similarity=0.132 Sum_probs=50.6
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC--cCcCCCCceeEEEEcC-----CC---CEEEEEeC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ--FGVSGGGGINRVVCHP-----TL---PLTITAHD 73 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~-----~~---~~~~~~~~ 73 (116)
.++|++++.+ +=-+++.|.++|.+.+.|++....+..-.... ........++++.|.. |+ ..+++|.+
T Consensus 86 ~g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn 163 (395)
T PF08596_consen 86 QGPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN 163 (395)
T ss_dssp S-SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred CCcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence 5889999986 44799999999999999998665554422111 0011134577777752 33 36788888
Q ss_pred CCeEEEEECC
Q psy17133 74 DRHIRFFDNV 83 (116)
Q Consensus 74 d~~i~~~~~~ 83 (116)
.|.+.+|.+.
T Consensus 164 ~G~v~~fkIl 173 (395)
T PF08596_consen 164 SGNVLTFKIL 173 (395)
T ss_dssp TSEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999999764
No 389
>KOG2247|consensus
Probab=95.05 E-value=0.0034 Score=40.29 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=68.0
Q ss_pred CCCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
++...+++|.. +++.+ +.+-..+.+++||+.+... ..++.+. ..-.-+.|++-.+.++.+...+.+.+++
T Consensus 74 tg~aldm~wDk-egdvlavlAek~~piylwd~n~eytqqLE~gg~-------~s~sll~wsKg~~el~ig~~~gn~viyn 145 (615)
T KOG2247|consen 74 TGKALDMAWDK-EGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGT-------SSKSLLAWSKGTPELVIGNNAGNIVIYN 145 (615)
T ss_pred chhHhhhhhcc-ccchhhhhhhcCCCeeechhhhhhHHHHhccCc-------chHHHHhhccCCccccccccccceEEEe
Confidence 34456677777 55544 4455678899999975432 2223232 1223377888888888888889999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
..+.+..-....|..++..+++.+.+..+..
T Consensus 146 hgtsR~iiv~Gkh~RRgtq~av~lEd~vil~ 176 (615)
T KOG2247|consen 146 HGTSRRIIVMGKHQRRGTQIAVTLEDYVILC 176 (615)
T ss_pred ccchhhhhhhcccccceeEEEecccceeeec
Confidence 8776655444447778889999888765543
No 390
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.98 E-value=0.37 Score=28.11 Aligned_cols=54 Identities=13% Similarity=0.109 Sum_probs=38.8
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-------e-------cccccEEEEEECCCCcEEEeee
Q psy17133 61 CHPTLPLTITAHDDRHIRFFDNVSGKLVHSM-------V-------AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 61 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+..++.++.+...+|.+++||+.+++.+..- . .....|..+..+.+|.-+++-+
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls 85 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS 85 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe
Confidence 4456888999999999999999987764332 1 1334677778888887666544
No 391
>KOG2444|consensus
Probab=94.95 E-value=0.16 Score=29.66 Aligned_cols=64 Identities=9% Similarity=0.102 Sum_probs=43.7
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE--eCCCeEEEEECCC
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA--HDDRHIRFFDNVS 84 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~d~~i~~~~~~~ 84 (116)
++.+..++..++.++.|+..-++.+...-.|.. ...........++.++.+ +.+..++.|+++.
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~-----~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF-----ESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeeccccC-----CCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 344777888899999999987776655555521 334455555566667666 7788888888764
No 392
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.85 E-value=0.56 Score=29.53 Aligned_cols=59 Identities=15% Similarity=0.137 Sum_probs=36.8
Q ss_pred CceeEEEEcCCCCEEEEEeCC-------------------CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 54 GGINRVVCHPTLPLTITAHDD-------------------RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d-------------------~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.....+.+.|||.+.++.+.. +.+.-++..+++.. .+...-.....++|+|+|+++++-
T Consensus 124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e-~~a~G~rnp~Gl~~d~~G~l~~td 201 (367)
T TIGR02604 124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLR-VVAHGFQNPYGHSVDSWGDVFFCD 201 (367)
T ss_pred ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEE-EEecCcCCCccceECCCCCEEEEc
Confidence 347789999999876654421 34555565544432 333222335689999999988753
No 393
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=94.83 E-value=0.51 Score=29.01 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=34.7
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.+.+..+...+++++++.+..-..+.-|+.-...-...-+....++..|.|.|++...+.
T Consensus 144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~ 203 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWML 203 (302)
T ss_dssp ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEE
T ss_pred cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEE
Confidence 456888888999999988877777778886433222223334578999999999886554
No 394
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=94.81 E-value=0.67 Score=30.23 Aligned_cols=109 Identities=15% Similarity=0.147 Sum_probs=59.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCC------CEEEEEe---
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTL------PLTITAH--- 72 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~--- 72 (116)
...+..+.|.| ++.++++--..++|++++..++.. +..+..... ....+....++++|+- .+++...
T Consensus 29 L~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~-~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~ 106 (454)
T TIGR03606 29 LNKPWALLWGP-DNQLWVTERATGKILRVNPETGEVKVVFTLPEIVN-DAQHNGLLGLALHPDFMQEKGNPYVYISYTYK 106 (454)
T ss_pred CCCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCceeeeecCCceec-cCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence 35678899999 777766655468999988654432 211111000 0014668999999873 2444332
Q ss_pred -------CCCeEEEEECCCC--e---EEEEeec----ccccEEEEEECCCCcEEEeee
Q psy17133 73 -------DDRHIRFFDNVSG--K---LVHSMVA----HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 73 -------~d~~i~~~~~~~~--~---~~~~~~~----~~~~v~~~~~~~~~~~l~~~s 114 (116)
....|.-|.+... . ....+.. ..+.-..|.|.|||.++++.+
T Consensus 107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~G 164 (454)
T TIGR03606 107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIG 164 (454)
T ss_pred CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEEC
Confidence 1234544554311 1 1111211 112345788999998776544
No 395
>KOG0882|consensus
Probab=94.75 E-value=0.68 Score=30.06 Aligned_cols=88 Identities=9% Similarity=0.044 Sum_probs=60.9
Q ss_pred eCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC------CeEEEEe-----
Q psy17133 24 FDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS------GKLVHSM----- 91 (116)
Q Consensus 24 ~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~------~~~~~~~----- 91 (116)
..++.+.++|-.... +..-++.- |..+|..+.+.+.+..+.+....|-|.-|..+. .+....+
T Consensus 119 ~~sg~i~VvD~~~d~~q~~~fkkl-----H~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTd 193 (558)
T KOG0882|consen 119 FKSGKIFVVDGFGDFCQDGYFKKL-----HFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETD 193 (558)
T ss_pred ccCCCcEEECCcCCcCccceeccc-----ccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccch
Confidence 468889999976432 44444332 167899999999999999998899999998762 1111111
Q ss_pred ----ecccccEEEEEECCCCcEEEeeecC
Q psy17133 92 ----VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 92 ----~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
........++.|+|++..+.+.+.|
T Consensus 194 Ly~f~K~Kt~pts~Efsp~g~qistl~~D 222 (558)
T KOG0882|consen 194 LYGFPKAKTEPTSFEFSPDGAQISTLNPD 222 (558)
T ss_pred hhcccccccCccceEEccccCcccccCcc
Confidence 1223456889999999988765543
No 396
>KOG4460|consensus
Probab=94.68 E-value=0.72 Score=30.71 Aligned_cols=81 Identities=15% Similarity=0.159 Sum_probs=47.4
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEE---------CCCCceeEEEecCCcC---c--CCCCceeEEEEcCCC---CEEE
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFD---------LETGKPVVRIDSSQFG---V--SGGGGINRVVCHPTL---PLTI 69 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~---------~~~~~~~~~~~~~~~~---~--~~~~~i~~~~~~~~~---~~~~ 69 (116)
|..+..++ .|..++.++.+|-+.++- .++|+.+.....-.-. . ...-.+..++|+|+. ..+.
T Consensus 106 V~~vl~s~-~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 106 VYQVLLSP-TGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEecC-CCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 45566777 677776666676655433 1244433222111000 0 001235678999975 5888
Q ss_pred EEeCCCeEEEEECCCCeEE
Q psy17133 70 TAHDDRHIRFFDNVSGKLV 88 (116)
Q Consensus 70 ~~~~d~~i~~~~~~~~~~~ 88 (116)
....|+.+++|++..-..+
T Consensus 185 iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred EEecCcEEEEEecCCcchh
Confidence 8889999999998654433
No 397
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.66 E-value=0.63 Score=29.29 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=55.9
Q ss_pred CCCceEEEEccCCCcEEEEee-----------CCC-eEEEEECC--CCce--eEEEecCCcCcCCCCceeEEEEcCCCCE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAF-----------DNS-ACVLFDLE--TGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPL 67 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~-----------~~~-~v~i~~~~--~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 67 (116)
...+..++|.+ +++++++-. ..+ .|.+++-. +++. ...+... ......+++.+++ +
T Consensus 13 ~~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~------l~~p~Gi~~~~~G-l 84 (367)
T TIGR02604 13 LRNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEE------LSMVTGLAVAVGG-V 84 (367)
T ss_pred cCCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecC------CCCccceeEecCC-E
Confidence 45678899998 778777642 122 67777643 2332 2333322 2346788898888 4
Q ss_pred EEEEeCCCeEEEE-ECCC-------CeEEE-Eeecc----cccEEEEEECCCCcEEEeee
Q psy17133 68 TITAHDDRHIRFF-DNVS-------GKLVH-SMVAH----LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 68 ~~~~~~d~~i~~~-~~~~-------~~~~~-~~~~~----~~~v~~~~~~~~~~~l~~~s 114 (116)
++ +... .|..+ +... .+.+. .+... ......++|.|||++.++.+
T Consensus 85 yV-~~~~-~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 85 YV-ATPP-DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred EE-eCCC-eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 44 3333 34434 4321 11121 12221 23467899999998766543
No 398
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=94.66 E-value=0.57 Score=31.10 Aligned_cols=51 Identities=20% Similarity=0.270 Sum_probs=37.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 65 LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.-+++.++..|.|++||--..+....+.+-...|..+..+.+|++++..|.
T Consensus 573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk 623 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK 623 (776)
T ss_pred CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec
Confidence 348899999999999995433333345555667888888999998876654
No 399
>KOG2377|consensus
Probab=94.65 E-value=0.73 Score=30.16 Aligned_cols=55 Identities=5% Similarity=0.073 Sum_probs=40.4
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE----eecccccEEEEEECCCC
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS----MVAHLDAVTSLAVDPQG 107 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~ 107 (116)
.+.|.++.|++|.+.++..-.+++|.+++....+.... .+.....|.+++|+...
T Consensus 66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~ 124 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSST 124 (657)
T ss_pred CCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCe
Confidence 56899999999999999999999999999753332222 22233457888887653
No 400
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=94.41 E-value=0.79 Score=29.34 Aligned_cols=83 Identities=11% Similarity=0.188 Sum_probs=50.7
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE------EEe-------cC--CcC---------------------
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV------RID-------SS--QFG--------------------- 49 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~------~~~-------~~--~~~--------------------- 49 (116)
.|..+.|.+ +..-++++...|.|.+|....++.-. ... .. ...
T Consensus 3 ~v~~vs~a~-~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l 81 (395)
T PF08596_consen 3 SVTHVSFAP-ETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL 81 (395)
T ss_dssp -EEEEEEET-TTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred eEEEEEecC-CCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence 578899998 66778888888998887654221110 000 00 000
Q ss_pred -cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE
Q psy17133 50 -VSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS 90 (116)
Q Consensus 50 -~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 90 (116)
....+.|++++.+ |--+++.+.++|.+.+.|++....+..
T Consensus 82 ~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 82 LDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYN 122 (395)
T ss_dssp E---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEee
Confidence 0235678888875 444899999999999999987776665
No 401
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=94.37 E-value=0.66 Score=31.18 Aligned_cols=68 Identities=10% Similarity=0.087 Sum_probs=40.0
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCC-C-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEECC
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLET-G-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFDNV 83 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~~~ 83 (116)
..+.|+| ....|++-.....-.++++.. + +....+++ .+.|.+.+|.+||..++. .+..-.-++||-.
T Consensus 116 QGCVWHP-k~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~-------~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 116 QGCVWHP-KKAILTVLTARDVSVLPSVHCDSSRVKADIKT-------SGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CcccccC-CCceEEEEecCceeEeeeeeeCCceEEEeccC-------CceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 4567888 656665544332222334432 2 22333433 478999999999875544 4445567888854
No 402
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=94.23 E-value=1 Score=29.96 Aligned_cols=78 Identities=14% Similarity=0.080 Sum_probs=46.5
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc-EEEEEECC
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA-VTSLAVDP 105 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~ 105 (116)
+.+.-+|+.+++.+-..+.... ...+. +.-.+.+++.+..++.++.+|.++|+.+......... -.=+.|.-
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p------~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P~ty~~ 513 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFP------LWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIVGPPVTYEQ 513 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCC------CCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCceecCEEEEe
Confidence 4577788888876665543311 11111 1124456777888999999999999998877643221 11233345
Q ss_pred CCcEEE
Q psy17133 106 QGLYIL 111 (116)
Q Consensus 106 ~~~~l~ 111 (116)
+|+..+
T Consensus 514 ~G~qYv 519 (527)
T TIGR03075 514 DGKQYV 519 (527)
T ss_pred CCEEEE
Confidence 666443
No 403
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=94.19 E-value=0.16 Score=20.55 Aligned_cols=21 Identities=29% Similarity=0.254 Sum_probs=14.7
Q ss_pred ccccEEEEEECCCCcEEEeee
Q psy17133 94 HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 94 ~~~~v~~~~~~~~~~~l~~~s 114 (116)
....-....|+|||++|+-.+
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s 27 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTS 27 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEE
T ss_pred CCccccCEEEecCCCEEEEEe
Confidence 344567789999999987554
No 404
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=94.14 E-value=0.34 Score=24.06 Aligned_cols=38 Identities=13% Similarity=0.202 Sum_probs=27.2
Q ss_pred CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
+|.+..||..+++....+.+ -.....++.++|+.+++.
T Consensus 36 ~GRll~ydp~t~~~~vl~~~-L~fpNGVals~d~~~vlv 73 (89)
T PF03088_consen 36 TGRLLRYDPSTKETTVLLDG-LYFPNGVALSPDESFVLV 73 (89)
T ss_dssp -EEEEEEETTTTEEEEEEEE-ESSEEEEEE-TTSSEEEE
T ss_pred CcCEEEEECCCCeEEEehhC-CCccCeEEEcCCCCEEEE
Confidence 47788999998876555543 345789999999997764
No 405
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=94.14 E-value=0.29 Score=31.38 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=35.2
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH 94 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~ 94 (116)
...+.+++.+|++++.++...=|.|.++|+.++..++.+++.
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGY 348 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGY 348 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccC
Confidence 446788999999999998877899999999998877777643
No 406
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=93.70 E-value=0.22 Score=20.34 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=22.3
Q ss_pred CCcEEEEe-eCCCeEEEEECCCCceeEEEecC
Q psy17133 16 ESTKMVTA-FDNSACVLFDLETGKPVVRIDSS 46 (116)
Q Consensus 16 ~~~~l~~~-~~~~~v~i~~~~~~~~~~~~~~~ 46 (116)
+++.++++ ..++.|.++|..+++.+..+...
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg 33 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPVG 33 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence 44555554 46889999999888877777654
No 407
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=93.65 E-value=0.55 Score=31.15 Aligned_cols=61 Identities=13% Similarity=0.105 Sum_probs=44.7
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...++++++..|.|++||--..+....+++- ...|..+....+|+++++.+ ..++.+-|++
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~l------G~aIk~idvta~Gk~ilaTC-k~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGL------GDAIKHIDVTANGKHILATC-KNYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCccc------ccceeeeEeecCCcEEEEee-cceEEEEecc
Confidence 4468899999999999997654444445544 34688999999999877665 4567777654
No 408
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=93.49 E-value=0.86 Score=26.56 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=33.3
Q ss_pred EEEEEeCCCeEEEEECC--CCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 67 LTITAHDDRHIRFFDNV--SGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 67 ~~~~~~~d~~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.+..+.....|.+|++. ..+.+..+.. -+.|..+.++..|++++|-
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEE
Confidence 33333556789999987 3445556653 3679999999999999874
No 409
>PRK10115 protease 2; Provisional
Probab=93.33 E-value=0.44 Score=32.65 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=37.8
Q ss_pred ceeEEEEcCCCCEEEEEeC-----CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 55 GINRVVCHPTLPLTITAHD-----DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~-----d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.+..+.++|++++++.+.+ ...+++.|+.+++.+....... -..++|.+|++.|+-.
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~~~~~w~~D~~~~~y~ 189 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--EPSFVWANDSWTFYYV 189 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--ceEEEEeeCCCEEEEE
Confidence 4667889999998876533 3468899998886432221111 1458999998876644
No 410
>KOG1916|consensus
Probab=93.30 E-value=0.038 Score=38.41 Aligned_cols=109 Identities=14% Similarity=0.171 Sum_probs=58.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEcC---CCCEEEEEeCCCeEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCHP---TLPLTITAHDDRHIR 78 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~d~~i~ 78 (116)
.|.+..+.|...+...+. -.-+.+.+|++. .|+....+..+... .....+.-+.|.| +..+++.+-.++.++
T Consensus 132 ~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~-p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~ 208 (1283)
T KOG1916|consen 132 PGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPIT-PYGSDPQLVSWCPIAVNKVYICYGLKGGEIR 208 (1283)
T ss_pred CCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecC-cCCCCcceeeecccccccceeeeccCCCcee
Confidence 456666666443333333 334667888875 34432222211000 0023455666665 455777777778877
Q ss_pred EEECCCCeEEEEeecccccEEEE-----------EECCCCcEEEeeecC
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSL-----------AVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~s~d 116 (116)
+-.+..... ..+..|..++..+ ..+|||..+++++.|
T Consensus 209 lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~d 256 (1283)
T KOG1916|consen 209 LLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISD 256 (1283)
T ss_pred EeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecC
Confidence 766543221 2233344443333 258999999988765
No 411
>KOG1008|consensus
Probab=93.29 E-value=0.014 Score=38.70 Aligned_cols=91 Identities=14% Similarity=0.281 Sum_probs=55.2
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEEC-CC
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRFFDN-VS 84 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~~-~~ 84 (116)
..++|.. +.+.+++|...+.++++|++.. .....+.. ..+..+.+.| .+.++++-. |+.+-+||. .+
T Consensus 158 ns~cwlr-d~klvlaGm~sr~~~ifdlRqs~~~~~svnT--------k~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rn 227 (783)
T KOG1008|consen 158 NSVCWLR-DTKLVLAGMTSRSVHIFDLRQSLDSVSSVNT--------KYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRN 227 (783)
T ss_pred ccccccc-Ccchhhcccccchhhhhhhhhhhhhhhhhhh--------hhcccceecCCCCCceeccc-cCceeeccchhh
Confidence 3566765 5567777777778999988722 22222222 2466777888 566776665 999999993 32
Q ss_pred CeE-EEEeec----ccccEEEEEECCCCc
Q psy17133 85 GKL-VHSMVA----HLDAVTSLAVDPQGL 108 (116)
Q Consensus 85 ~~~-~~~~~~----~~~~v~~~~~~~~~~ 108 (116)
-+. ++++.. ....+..++|.|...
T Consensus 228 ienpl~~i~~~~N~~~~~l~~~aycPtrt 256 (783)
T KOG1008|consen 228 IENPLQIILRNENKKPKQLFALAYCPTRT 256 (783)
T ss_pred hccHHHHHhhCCCCcccceeeEEeccCCc
Confidence 221 222211 123578889988643
No 412
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=93.22 E-value=1.2 Score=27.57 Aligned_cols=102 Identities=18% Similarity=0.313 Sum_probs=60.4
Q ss_pred eEEEEccCCCcEEEEeeCC------CeEEEEECCCCceeEEEecCC---------cCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133 8 TSIDFVRDESTKMVTAFDN------SACVLFDLETGKPVVRIDSSQ---------FGVSGGGGINRVVCHPTLPLTITAH 72 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (116)
.++.+.+ ++.++++.-.+ ..|..++.. |+....+.... .....+..+.+++++|+++.++++.
T Consensus 88 Egi~~~~-~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~ 165 (326)
T PF13449_consen 88 EGIAVPP-DGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM 165 (326)
T ss_pred hHeEEec-CCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence 4677755 66777765556 778888876 66555542111 1122355688999999999655543
Q ss_pred C-----CC--e-------EEE--EECCC-CeEEEE----eec-----ccccEEEEEECCCCcEEE
Q psy17133 73 D-----DR--H-------IRF--FDNVS-GKLVHS----MVA-----HLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 73 ~-----d~--~-------i~~--~~~~~-~~~~~~----~~~-----~~~~v~~~~~~~~~~~l~ 111 (116)
+ |+ . +++ +|..+ ++.... +.. ....+..+.+-+++++|+
T Consensus 166 E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLv 230 (326)
T PF13449_consen 166 ESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLV 230 (326)
T ss_pred CccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEE
Confidence 3 21 1 444 45444 322222 221 345788899999988765
No 413
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=92.96 E-value=1.2 Score=26.61 Aligned_cols=61 Identities=18% Similarity=0.259 Sum_probs=42.2
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 85 (116)
.++.|+.|.++| +++++.........+... ..|..+...|+-..++..+ |+.+.++++..-
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~-------~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l 66 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILKL-------SSITQLSVLPELNLLLVLS-DGQLYVYDLDSL 66 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEeec-------ceEEEEEEecccCEEEEEc-CCccEEEEchhh
Confidence 457888888887 899998433333333222 2488999988877666665 499999997643
No 414
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=92.93 E-value=1.3 Score=26.82 Aligned_cols=97 Identities=19% Similarity=0.188 Sum_probs=59.2
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec--
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA-- 93 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-- 93 (116)
+++.|+.+.....++++|..+.+.+..+...... ..-..++.+.+. +|.+.|-.=....|...|..+|+....+..
T Consensus 138 dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g-~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~ 215 (264)
T PF05096_consen 138 DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNG-RPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSG 215 (264)
T ss_dssp CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETT-EE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HH
T ss_pred CCCEEEEECCccceEEECCcccceEEEEEEEECC-EECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhH
Confidence 4566666666778999999888777766543210 001245666665 576666666678899999999998876631
Q ss_pred --------c-----cccEEEEEECCCCcEEEeee
Q psy17133 94 --------H-----LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 94 --------~-----~~~v~~~~~~~~~~~l~~~s 114 (116)
. ..-...++++|..+.|...+
T Consensus 216 L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 216 LRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp HHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred hhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 0 23468999998766554443
No 415
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=92.74 E-value=1.9 Score=28.40 Aligned_cols=74 Identities=22% Similarity=0.141 Sum_probs=45.8
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCcee--EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGIN--RVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
..++.++.++.++-.|..+++.+-.+............+. .+.+. ++..++.++.++.|..+|.++|+.+....
T Consensus 62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~ 137 (488)
T cd00216 62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFG 137 (488)
T ss_pred CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeec
Confidence 4556667788999999999987766654311000000000 11111 22567777789999999999998876654
No 416
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=92.63 E-value=1.5 Score=26.99 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=54.4
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
.++|+++.-.. +. ++++. +..+.+|++...+ .+..-..+. ...+.++... +.+++.+.....+.++..
T Consensus 88 ~g~V~ai~~~~--~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~-----~~~i~sl~~~--~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 88 KGPVTAICSFN--GR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDS-----PFYITSLSVF--KNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp SS-EEEEEEET--TE-EEEEE-TTEEEEEEEETTSSEEEEEEE-B-----SSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred cCcceEhhhhC--CE-EEEee-cCEEEEEEccCcccchhhheecc-----eEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence 56788887553 24 44444 5789999987666 333322221 2345555444 568888888777777644
Q ss_pred CC-CeEEEEeec--ccccEEEEEECCCCcEEEee
Q psy17133 83 VS-GKLVHSMVA--HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 83 ~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~ 113 (116)
+. ...+..+.. ....+.++.|-++++.++.+
T Consensus 157 ~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~ 190 (321)
T PF03178_consen 157 DEENNKLILVARDYQPRWVTAAEFLVDEDTIIVG 190 (321)
T ss_dssp ETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEE
T ss_pred EccCCEEEEEEecCCCccEEEEEEecCCcEEEEE
Confidence 32 333333332 23457788887555555544
No 417
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=92.56 E-value=0.68 Score=30.74 Aligned_cols=29 Identities=28% Similarity=0.403 Sum_probs=24.5
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEe
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRID 44 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~ 44 (116)
+..++++-+.|+.+++||+.+++.+....
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 45788899999999999999998866553
No 418
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=92.36 E-value=0.32 Score=18.68 Aligned_cols=25 Identities=12% Similarity=0.135 Sum_probs=19.9
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEE
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVR 42 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~ 42 (116)
..++.++.++.++.+|..+|+.+-.
T Consensus 7 ~~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 7 GTVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred CEEEEEcCCCEEEEEEcccCcEEEE
Confidence 3677778899999999988877654
No 419
>KOG2280|consensus
Probab=92.31 E-value=2.6 Score=29.39 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=36.3
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
..|.||+.. |+.+..+... .+.+-.+.|+.+..++ +...+|.+++|++.
T Consensus 64 ~~I~If~~s-G~lL~~~~w~------~~~lI~mgWs~~eeLI-~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 64 PYIRIFNIS-GQLLGRILWK------HGELIGMGWSDDEELI-CVQKDGTVHVYGLL 112 (829)
T ss_pred eeEEEEecc-ccchHHHHhc------CCCeeeecccCCceEE-EEeccceEEEeecc
Confidence 457777765 7777777665 3578889998877654 55589999999975
No 420
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=92.24 E-value=1.7 Score=26.67 Aligned_cols=102 Identities=19% Similarity=0.148 Sum_probs=66.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+....++-.| ++....++...+.+--.|..+|+....-.+. ......+.+.||+...++-+.. .|.-.|-++
T Consensus 62 ~ap~dvapap-dG~VWft~qg~gaiGhLdP~tGev~~ypLg~------Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt 133 (353)
T COG4257 62 SAPFDVAPAP-DGAVWFTAQGTGAIGHLDPATGEVETYPLGS------GASPHGIVVGPDGSAWITDTGL-AIGRLDPKT 133 (353)
T ss_pred CCccccccCC-CCceEEecCccccceecCCCCCceEEEecCC------CCCCceEEECCCCCeeEecCcc-eeEEecCcc
Confidence 3455666677 6677777766677777788777754443444 3467788899998866664433 566667666
Q ss_pred CeEEE-Ee--ecccccEEEEEECCCCcEEEeee
Q psy17133 85 GKLVH-SM--VAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 85 ~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.+..+ .+ ...........|.+.|+..+++.
T Consensus 134 ~evt~f~lp~~~a~~nlet~vfD~~G~lWFt~q 166 (353)
T COG4257 134 LEVTRFPLPLEHADANLETAVFDPWGNLWFTGQ 166 (353)
T ss_pred cceEEeecccccCCCcccceeeCCCccEEEeec
Confidence 65432 12 22344567788999999887764
No 421
>KOG1520|consensus
Probab=92.16 E-value=2 Score=27.33 Aligned_cols=106 Identities=17% Similarity=0.158 Sum_probs=51.2
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE------------
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA------------ 71 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 71 (116)
.|++..++|.. .+.-++.+..---+..-+...+. ...+.....+. .-.-.+.+.+++++.+..+-
T Consensus 114 CGRPLGl~f~~-~ggdL~VaDAYlGL~~V~p~g~~-a~~l~~~~~G~-~~kf~N~ldI~~~g~vyFTDSSsk~~~rd~~~ 190 (376)
T KOG1520|consen 114 CGRPLGIRFDK-KGGDLYVADAYLGLLKVGPEGGL-AELLADEAEGK-PFKFLNDLDIDPEGVVYFTDSSSKYDRRDFVF 190 (376)
T ss_pred cCCcceEEecc-CCCeEEEEecceeeEEECCCCCc-ceeccccccCe-eeeecCceeEcCCCeEEEeccccccchhheEE
Confidence 47889999998 44345544433333444444332 22222111100 00112344455544433332
Q ss_pred -----eCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 72 -----HDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 72 -----~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
..+|.+.-||..+..... +...-.....++.+||+.+++.+
T Consensus 191 a~l~g~~~GRl~~YD~~tK~~~V-Lld~L~F~NGlaLS~d~sfvl~~ 236 (376)
T KOG1520|consen 191 AALEGDPTGRLFRYDPSTKVTKV-LLDGLYFPNGLALSPDGSFVLVA 236 (376)
T ss_pred eeecCCCccceEEecCcccchhh-hhhcccccccccCCCCCCEEEEE
Confidence 234666667765443322 22223345678889999887653
No 422
>PRK13684 Ycf48-like protein; Provisional
Probab=91.92 E-value=2 Score=26.82 Aligned_cols=101 Identities=12% Similarity=0.007 Sum_probs=54.0
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+.+.++.+.| ++..++++. .+.+..-.-..++.-....... ...+..+.+.++++.++.+ ..+.+++=....
T Consensus 173 g~~~~i~~~~-~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~-----~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~ 244 (334)
T PRK13684 173 GVVRNLRRSP-DGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNS-----SRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDD 244 (334)
T ss_pred ceEEEEEECC-CCeEEEEeC-CceEEEEcCCCCCeEEEeeCCC-----cccceeeeEcCCCCEEEEe-cCCEEEEccCCC
Confidence 4567788888 555555544 4544432112222222222211 3568899999998877665 456665322344
Q ss_pred CeEEEEeec----ccccEEEEEECCCCcEEEee
Q psy17133 85 GKLVHSMVA----HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 85 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~ 113 (116)
++.-..... ....+..+.+.|++..++.+
T Consensus 245 G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G 277 (334)
T PRK13684 245 LESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG 277 (334)
T ss_pred CCccccccCCccccccceeeEEEcCCCCEEEEc
Confidence 433222111 12346778888887766654
No 423
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=91.88 E-value=2.9 Score=28.64 Aligned_cols=60 Identities=17% Similarity=0.212 Sum_probs=40.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cccccEEEEEEC--CCCcEEEeee
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVD--PQGLYILSGT 114 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~s 114 (116)
.+.-+.-+.-++..+.-+....+.|||.+.+.....-. ...+.|.++.|. |+++.+++.|
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVG 93 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVG 93 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEE
Confidence 34455555556666666667789999999887654432 346688999884 6888776654
No 424
>KOG4499|consensus
Probab=91.85 E-value=1.7 Score=25.99 Aligned_cols=47 Identities=19% Similarity=0.214 Sum_probs=38.4
Q ss_pred EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC
Q psy17133 10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (116)
++... +|+..++....++|...|..+|+.+.+++-. ...+++.+|--
T Consensus 217 m~ID~-eG~L~Va~~ng~~V~~~dp~tGK~L~eiklP------t~qitsccFgG 263 (310)
T KOG4499|consen 217 MTIDT-EGNLYVATFNGGTVQKVDPTTGKILLEIKLP------TPQITSCCFGG 263 (310)
T ss_pred ceEcc-CCcEEEEEecCcEEEEECCCCCcEEEEEEcC------CCceEEEEecC
Confidence 34444 6788888888999999999999999999877 56899999973
No 425
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=91.63 E-value=1.7 Score=25.41 Aligned_cols=56 Identities=14% Similarity=0.256 Sum_probs=40.7
Q ss_pred cEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---C---eEEEE
Q psy17133 18 TKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---R---HIRFF 80 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~---~i~~~ 80 (116)
+.|+.+.....|.+|++. ..+.+..|..- +.+..+.++..|.++++.-.+ . .+++|
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-------~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y 92 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-------GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAY 92 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-------hheeEEEeccccceEEEEEeecCCccceEEEEE
Confidence 556555667789999987 34566677655 578999999999999986543 2 56665
No 426
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=91.17 E-value=0.45 Score=17.88 Aligned_cols=25 Identities=8% Similarity=0.214 Sum_probs=15.7
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 56 INRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 56 i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
..+++++++|.++++-...+.|.++
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4566777777666666666666543
No 427
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=90.86 E-value=1.2 Score=22.17 Aligned_cols=48 Identities=19% Similarity=0.122 Sum_probs=31.0
Q ss_pred CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-eCCCeEEE
Q psy17133 25 DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-HDDRHIRF 79 (116)
Q Consensus 25 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d~~i~~ 79 (116)
.+|.+..||..+++....+.+- ...+.+++++|+..++.+ .....|.-
T Consensus 35 ~~GRll~ydp~t~~~~vl~~~L-------~fpNGVals~d~~~vlv~Et~~~Ri~r 83 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLLDGL-------YFPNGVALSPDESFVLVAETGRYRILR 83 (89)
T ss_dssp --EEEEEEETTTTEEEEEEEEE-------SSEEEEEE-TTSSEEEEEEGGGTEEEE
T ss_pred CCcCEEEEECCCCeEEEehhCC-------CccCeEEEcCCCCEEEEEeccCceEEE
Confidence 3578999999988765555544 367999999999865544 33444433
No 428
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=90.56 E-value=1.5 Score=22.82 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=39.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc---CCC-CEEEEEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH---PTL-PLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~-~~~~~~~~d~~i~ 78 (116)
..+.|..+.-.. ...++.+..+|+|-+|+-. +.+-..+.. ..+.++.+. -+| +.++++-.+|.|-
T Consensus 41 e~~~v~~L~~~~--~~~F~Y~l~NGTVGvY~~~--~RlWRiKSK-------~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 41 ETDKVTSLCSLG--GGRFAYALANGTVGVYDRS--QRLWRIKSK-------NQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred cccceEEEEEcC--CCEEEEEecCCEEEEEeCc--ceeeeeccC-------CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 356677777665 3788999999999999864 233344433 234454433 233 3566776666653
No 429
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=90.42 E-value=2.5 Score=25.26 Aligned_cols=80 Identities=19% Similarity=0.153 Sum_probs=44.2
Q ss_pred EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C--CeEEEEECCC----CeEEE---EeecccccE
Q psy17133 29 CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D--RHIRFFDNVS----GKLVH---SMVAHLDAV 98 (116)
Q Consensus 29 v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d--~~i~~~~~~~----~~~~~---~~~~~~~~v 98 (116)
-.+||+.+++. ..+.... .....+-.+-+||+++.+++. + ..+++++..+ ..... .+. .....
T Consensus 48 s~~yD~~tn~~-rpl~v~t-----d~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~-~~RWY 120 (243)
T PF07250_consen 48 SVEYDPNTNTF-RPLTVQT-----DTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQ-SGRWY 120 (243)
T ss_pred EEEEecCCCcE-EeccCCC-----CCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECccccc-CCCcc
Confidence 34788877653 3333221 122334456689999988775 2 4578887543 11111 111 12233
Q ss_pred EEEEECCCCcEEEeeec
Q psy17133 99 TSLAVDPQGLYILSGTY 115 (116)
Q Consensus 99 ~~~~~~~~~~~l~~~s~ 115 (116)
-...--|||+.|+.|+.
T Consensus 121 pT~~~L~DG~vlIvGG~ 137 (243)
T PF07250_consen 121 PTATTLPDGRVLIVGGS 137 (243)
T ss_pred ccceECCCCCEEEEeCc
Confidence 34555789999988875
No 430
>KOG1897|consensus
Probab=90.24 E-value=5.5 Score=28.86 Aligned_cols=99 Identities=16% Similarity=0.223 Sum_probs=52.5
Q ss_pred eEEEEccCCCcEEEEee----------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133 8 TSIDFVRDESTKMVTAF----------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI 77 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 77 (116)
.+..|..+.+.++++|. ..|.+.++.....+.+.....+.- .+.+.++.. -+|+++|.- ...|
T Consensus 778 ~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v----~Gav~aL~~-fngkllA~I--n~~v 850 (1096)
T KOG1897|consen 778 ISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVV----KGAVYALVE-FNGKLLAGI--NQSV 850 (1096)
T ss_pred eeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeee----ccceeehhh-hCCeEEEec--CcEE
Confidence 34457653355666654 146677777665333333322211 233444432 357777665 4579
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
++|++.+.+.++....+..++..+...-.+..++.|
T Consensus 851 rLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~Vg 886 (1096)
T KOG1897|consen 851 RLYEWTTERELRIECNISNPIIALDLQVKGDEIAVG 886 (1096)
T ss_pred EEEEccccceehhhhcccCCeEEEEEEecCcEEEEe
Confidence 999988776555544444455555554455544443
No 431
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=89.77 E-value=5.8 Score=28.47 Aligned_cols=78 Identities=9% Similarity=-0.005 Sum_probs=45.0
Q ss_pred CCeEEEEECCCCceeEE-EecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCC-----eEEEEECCCC-eEEEEeeccccc
Q psy17133 26 NSACVLFDLETGKPVVR-IDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDR-----HIRFFDNVSG-KLVHSMVAHLDA 97 (116)
Q Consensus 26 ~~~v~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~-----~i~~~~~~~~-~~~~~~~~~~~~ 97 (116)
.+.+.+-|.....+... +.. ...+...+|+|||+.++. .+-++ .|.+-++.+. .-+..+......
T Consensus 328 ~~~L~~~D~dG~n~~~ve~~~-------~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aa 400 (912)
T TIGR02171 328 TGNLAYIDYTKGASRAVEIED-------TISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAA 400 (912)
T ss_pred CCeEEEEecCCCCceEEEecC-------CCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeeccccc
Confidence 35778888764444332 333 356888999999998876 33333 4777787643 223334333444
Q ss_pred EEEEEECCCCcEE
Q psy17133 98 VTSLAVDPQGLYI 110 (116)
Q Consensus 98 v~~~~~~~~~~~l 110 (116)
|..-...++|...
T Consensus 401 iprwrv~e~gdt~ 413 (912)
T TIGR02171 401 IPRWRVLENGDTV 413 (912)
T ss_pred ccceEecCCCCeE
Confidence 4444445555543
No 432
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=89.42 E-value=3.1 Score=24.87 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=59.0
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEE-CCCCce-eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---CCCeEEEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFD-LETGKP-VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH---DDRHIRFF 80 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~-~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~d~~i~~~ 80 (116)
.+....|++ ++...+....+....++. ..+++. ......... ...|..+.++|||..++... .++.|.+-
T Consensus 67 ~l~~PS~d~-~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~----~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va 141 (253)
T PF10647_consen 67 SLTRPSWDP-DGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGL----RGRITALRVSPDGTRVAVVVEDGGGGRVYVA 141 (253)
T ss_pred ccccccccC-CCCEEEEEcCCCceEEEEecCCCcceeEEeccccc----CCceEEEEECCCCcEEEEEEecCCCCeEEEE
Confidence 456677888 556555555555555553 333322 222222210 12799999999998666544 35677766
Q ss_pred ECC---CC------eEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 81 DNV---SG------KLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 81 ~~~---~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
-+. .+ ............+..+.|.+++.+++.+.
T Consensus 142 ~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~ 184 (253)
T PF10647_consen 142 GVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGR 184 (253)
T ss_pred EEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeC
Confidence 542 23 11111212245788999999988776543
No 433
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=89.38 E-value=0.87 Score=18.39 Aligned_cols=28 Identities=14% Similarity=0.243 Sum_probs=22.7
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEEecC
Q psy17133 19 KMVTAFDNSACVLFDLETGKPVVRIDSS 46 (116)
Q Consensus 19 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~ 46 (116)
.+..+..++.++-.|..+|+.+-.++..
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence 3455688999999999999988887654
No 434
>KOG1916|consensus
Probab=89.30 E-value=0.43 Score=33.71 Aligned_cols=80 Identities=14% Similarity=0.161 Sum_probs=45.3
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-----CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC-CC----
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-----SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV-SG---- 85 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~---- 85 (116)
+..++..+-.++.+++....... +..+..|.... -..+.+.-..++|||..++.++.||.++.|.+. +|
T Consensus 194 ~~~~ic~~~~~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~ 272 (1283)
T KOG1916|consen 194 NKVYICYGLKGGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVH 272 (1283)
T ss_pred ccceeeeccCCCceeEeeechHH-HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccH
Confidence 34555566667777776654221 12223332100 001222234479999999999999999999864 23
Q ss_pred eEEEEeecccc
Q psy17133 86 KLVHSMVAHLD 96 (116)
Q Consensus 86 ~~~~~~~~~~~ 96 (116)
+++..++.|.+
T Consensus 273 rclhewkphd~ 283 (1283)
T KOG1916|consen 273 RCLHEWKPHDK 283 (1283)
T ss_pred hhhhccCCCCC
Confidence 34445555553
No 435
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=89.17 E-value=2.6 Score=23.59 Aligned_cols=29 Identities=7% Similarity=0.118 Sum_probs=24.2
Q ss_pred ceeEEEEcCCC------CEEEEEeCCCeEEEEECC
Q psy17133 55 GINRVVCHPTL------PLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 55 ~i~~~~~~~~~------~~~~~~~~d~~i~~~~~~ 83 (116)
.+..++|+|.| .+|++...++.|.+|...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 68899999832 378889999999999866
No 436
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=89.00 E-value=5.2 Score=26.87 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=20.1
Q ss_pred CCeEEEEee-cccccEEEEEECCCCcEEEee
Q psy17133 84 SGKLVHSMV-AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 84 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+++..+-+. .....+..++|+||++.|+..
T Consensus 489 ~g~~~rf~~~P~gaE~tG~~fspDg~tlFvn 519 (524)
T PF05787_consen 489 TGELKRFLVGPNGAEITGPCFSPDGRTLFVN 519 (524)
T ss_pred ccceeeeccCCCCcccccceECCCCCEEEEE
Confidence 344433333 245689999999999988753
No 437
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=88.78 E-value=4.2 Score=25.53 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=52.5
Q ss_pred EEEEc-cCCCcEEEEeeCCCe--EEEEECCCCceeEEEecCCcCcCCCCcee-EEEEcCCCCEE-EEEeCC----CeEEE
Q psy17133 9 SIDFV-RDESTKMVTAFDNSA--CVLFDLETGKPVVRIDSSQFGVSGGGGIN-RVVCHPTLPLT-ITAHDD----RHIRF 79 (116)
Q Consensus 9 ~~~~~-~~~~~~l~~~~~~~~--v~i~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~-~~~~~d----~~i~~ 79 (116)
...|. +++..++.....+|. |++++...+. ...+... .-.|. -+.+++++..+ +++..+ ..+..
T Consensus 239 ~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G------~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~ 311 (353)
T PF00930_consen 239 PPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSG------DWEVTSILGWDEDNNRIYFTANGDNPGERHLYR 311 (353)
T ss_dssp EEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-S------SS-EEEEEEEECTSSEEEEEESSGGTTSBEEEE
T ss_pred ccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccC------ceeecccceEcCCCCEEEEEecCCCCCceEEEE
Confidence 44444 545455555556655 4555655444 3344333 24564 47778886654 455542 35666
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.++..+..+..+......-..+.|+|++++++-.
T Consensus 312 v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~ 345 (353)
T PF00930_consen 312 VSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDT 345 (353)
T ss_dssp EETTETTEEEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred EEeCCCCCeEeccCCCCCceEEEECCCCCEEEEE
Confidence 6676233344454333323689999999998744
No 438
>KOG3616|consensus
Probab=88.44 E-value=1.9 Score=30.32 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=40.1
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.++++.-+| .++.++.++.|+.+.+|+.....+........ +..-+.|... -+++...|..+.-|.
T Consensus 16 ~~~aiqshp-~~~s~v~~~~d~si~lfn~~~r~qski~~~~~-------p~~nlv~tnh--gl~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 16 FTTAIQSHP-GGQSFVLAHQDGSIILFNFIPRRQSKICEEAK-------PKENLVFTNH--GLVTATSDRRALAWK 81 (1636)
T ss_pred eeeeeeecC-CCceEEEEecCCcEEEEeecccchhhhhhhcC-------Cccceeeecc--ceEEEeccchhheee
Confidence 456777778 88999999999999999987554422222221 1112223222 355555566666665
No 439
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=87.99 E-value=2.1 Score=21.13 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=22.9
Q ss_pred CceeEEEEcCCCCEEEEEe-CCCeEEEEECC
Q psy17133 54 GGINRVVCHPTLPLTITAH-DDRHIRFFDNV 83 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~ 83 (116)
...+.|.++|+++.++.++ ..+.|.++..+
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 3568999999988776654 46889888764
No 440
>PHA02713 hypothetical protein; Provisional
Probab=87.64 E-value=6.7 Score=26.52 Aligned_cols=23 Identities=13% Similarity=0.135 Sum_probs=13.2
Q ss_pred CCcEEEEeeCC-----CeEEEEECCCCc
Q psy17133 16 ESTKMVTAFDN-----SACVLFDLETGK 38 (116)
Q Consensus 16 ~~~~l~~~~~~-----~~v~i~~~~~~~ 38 (116)
++...+.|+.+ ..+..||..+.+
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~ 378 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDK 378 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCe
Confidence 34555555543 247778877554
No 441
>PHA02713 hypothetical protein; Provisional
Probab=87.25 E-value=7.1 Score=26.40 Aligned_cols=24 Identities=4% Similarity=-0.014 Sum_probs=14.5
Q ss_pred CCCEEEEEeCC------CeEEEEECCC-CeE
Q psy17133 64 TLPLTITAHDD------RHIRFFDNVS-GKL 87 (116)
Q Consensus 64 ~~~~~~~~~~d------~~i~~~~~~~-~~~ 87 (116)
++++.+.|+.+ ..+..||.++ .+-
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W 493 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGW 493 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCe
Confidence 46666666543 2467788886 443
No 442
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=87.17 E-value=5 Score=24.59 Aligned_cols=66 Identities=17% Similarity=0.128 Sum_probs=42.6
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-----CEEEEE-eCCCeEEEEECCCCeEEEEee
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-----PLTITA-HDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~-~~d~~i~~~~~~~~~~~~~~~ 92 (116)
.++.+||+.+++.++.+.-........+.+..+.+.... .+++.. ....-|.++|+.+++..+.+.
T Consensus 34 pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~ 105 (287)
T PF03022_consen 34 PKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLH 105 (287)
T ss_dssp -EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEET
T ss_pred cEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEec
Confidence 478999999999888876543332335667888887632 233333 334689999999987665543
No 443
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=87.17 E-value=6.5 Score=25.85 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=40.9
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC--CCE-EEEEeCCCeEEEEE-CCCCeE----EEEeecc----
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT--LPL-TITAHDDRHIRFFD-NVSGKL----VHSMVAH---- 94 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~-~~~~~~d~~i~~~~-~~~~~~----~~~~~~~---- 94 (116)
.++++||+.+.+.++++..... ......++|..+ ... ++.+.-...|..|- .+.++- +-.+...
T Consensus 222 ~~l~vWD~~~r~~~Q~idLg~~----g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~ 297 (461)
T PF05694_consen 222 HSLHVWDWSTRKLLQTIDLGEE----GQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG 297 (461)
T ss_dssp -EEEEEETTTTEEEEEEES-TT----EEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S
T ss_pred CeEEEEECCCCcEeeEEecCCC----CCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc
Confidence 6799999999999988875421 123567777654 333 23333344455443 233431 1111110
Q ss_pred -------------cccEEEEEECCCCcEEEeeec
Q psy17133 95 -------------LDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 95 -------------~~~v~~~~~~~~~~~l~~~s~ 115 (116)
..-++.|..|-|.++|...++
T Consensus 298 ~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W 331 (461)
T PF05694_consen 298 WILPEMLKPFGAVPPLITDILISLDDRFLYVSNW 331 (461)
T ss_dssp S---GGGGGG-EE------EEE-TTS-EEEEEET
T ss_pred ccccccccccccCCCceEeEEEccCCCEEEEEcc
Confidence 235789999999999987654
No 444
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=87.12 E-value=5.4 Score=24.86 Aligned_cols=107 Identities=18% Similarity=0.299 Sum_probs=60.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCe------EEEEECCC--C--ceeE-----EEecCCcC--cCCCCceeEEEEcCCCCE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSA------CVLFDLET--G--KPVV-----RIDSSQFG--VSGGGGINRVVCHPTLPL 67 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~------v~i~~~~~--~--~~~~-----~~~~~~~~--~~~~~~i~~~~~~~~~~~ 67 (116)
+...++.+.+ ++..+++-++++. ++.+.+.. + ..+. .+...... ....-...++++.+++.+
T Consensus 20 GGlSgl~~~~-~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 20 GGLSGLDYDP-DDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred CcEeeEEEeC-CCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence 5567889987 3445555565655 55555432 1 1111 11111000 000113457888778888
Q ss_pred EEEEeCC------CeEEEEECCCCeEEEEee---------------cccccEEEEEECCCCcEEEee
Q psy17133 68 TITAHDD------RHIRFFDNVSGKLVHSMV---------------AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 68 ~~~~~~d------~~i~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+++.-.+ ..|..++.. |+....+. ......-+++++|+|+.|+++
T Consensus 99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~ 164 (326)
T PF13449_consen 99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA 164 (326)
T ss_pred EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence 8877667 788888866 65544331 123467899999999966654
No 445
>KOG3630|consensus
Probab=87.04 E-value=8 Score=28.73 Aligned_cols=63 Identities=10% Similarity=0.085 Sum_probs=42.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT 70 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (116)
....++++|+| .|..++.|..+|.+.=|-.. .+....+.+... .....|.+++|-....+++.
T Consensus 198 t~~~Tav~WSp-rGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~--~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 198 TNSQTAVLWSP-RGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPV--EENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred ccceeeEEecc-ccceeeEecCCCeEEEeecc-cceeecccCCCc--CCCcceeEEEEecceeEEEE
Confidence 34578999999 89999999999988877654 443333332211 11357899999877666654
No 446
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=87.03 E-value=1.1 Score=16.90 Aligned_cols=26 Identities=12% Similarity=0.008 Sum_probs=19.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFD 33 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~ 33 (116)
..|.+++..+ .+++++...+.+++|.
T Consensus 2 E~i~aia~g~---~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGD---SWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccC---CEEEEEeCCCeEEecC
Confidence 3567777655 6888888888888873
No 447
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.71 E-value=5.6 Score=24.66 Aligned_cols=40 Identities=8% Similarity=0.138 Sum_probs=31.5
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
...+.++.|+|+.+.+++..+...-.++=..+|..++.+.
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiP 124 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIP 124 (316)
T ss_pred cccccceeeCCCcceEEEecCCCceEEEEecCCceEEEec
Confidence 3458999999999988888777777777667788877764
No 448
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=86.53 E-value=9.1 Score=26.88 Aligned_cols=84 Identities=11% Similarity=0.147 Sum_probs=53.0
Q ss_pred CCcEEEEeeCCCeEEEEECCC-------C----c---------eeEEEecCCcCcCCCCceeEEEEc--CCCCEEEEEeC
Q psy17133 16 ESTKMVTAFDNSACVLFDLET-------G----K---------PVVRIDSSQFGVSGGGGINRVVCH--PTLPLTITAHD 73 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~-------~----~---------~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 73 (116)
+...|+.+.++|.|.+|..++ . . +-..+.. ...+++++++ ...+++|.+++
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v-------~~SaWGLdIh~~~~~rlIAVSsN 185 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV-------GASAWGLDIHDYKKSRLIAVSSN 185 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec-------CCceeEEEEEecCcceEEEEecC
Confidence 457888899999999997631 0 0 1111111 2468899998 77889999998
Q ss_pred CCeEEEEECCCC--eEE-EEeecccccEEEEEECCC
Q psy17133 74 DRHIRFFDNVSG--KLV-HSMVAHLDAVTSLAVDPQ 106 (116)
Q Consensus 74 d~~i~~~~~~~~--~~~-~~~~~~~~~v~~~~~~~~ 106 (116)
...|.+|-.... +.. ..-..+..-|.+++|-++
T Consensus 186 s~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~ 221 (717)
T PF08728_consen 186 SQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDD 221 (717)
T ss_pred CceEEEEEEeccccccccccccccccCCCeeEeecC
Confidence 888888765431 111 111124456778888654
No 449
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=85.73 E-value=8.2 Score=25.60 Aligned_cols=68 Identities=21% Similarity=0.114 Sum_probs=41.4
Q ss_pred CCeEEEEECCCCceeEEEecCCcCcCC--CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q psy17133 26 NSACVLFDLETGKPVVRIDSSQFGVSG--GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA 93 (116)
Q Consensus 26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 93 (116)
++.+.-.|..+++.+-+.......... ......-.....+..++.++.|+.++.+|.++|+.+.....
T Consensus 365 ~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 365 KGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred ceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 567888888888876665432100000 00110001112456788888999999999999998877653
No 450
>PHA03098 kelch-like protein; Provisional
Probab=85.09 E-value=9 Score=25.55 Aligned_cols=24 Identities=8% Similarity=0.102 Sum_probs=14.4
Q ss_pred CCCEEEEEeCC--------CeEEEEECCCCeE
Q psy17133 64 TLPLTITAHDD--------RHIRFFDNVSGKL 87 (116)
Q Consensus 64 ~~~~~~~~~~d--------~~i~~~~~~~~~~ 87 (116)
++++.+.|+.+ ..+.+||..+.+-
T Consensus 437 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 468 (534)
T PHA03098 437 DGKIYVIGGISYIDNIKVYNIVESYNPVTNKW 468 (534)
T ss_pred CCEEEEECCccCCCCCcccceEEEecCCCCce
Confidence 45555555532 2378888876654
No 451
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=84.92 E-value=6.3 Score=23.57 Aligned_cols=103 Identities=16% Similarity=0.140 Sum_probs=53.6
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe---cCC-----cCcCCCCceeEEE--EcCCC-CEEEEEeC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID---SSQ-----FGVSGGGGINRVV--CHPTL-PLTITAHD 73 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~---~~~-----~~~~~~~~i~~~~--~~~~~-~~~~~~~~ 73 (116)
..|..+...| +-+.+++-+ |+.++++++..-....... ... ........+...+ -.+.+ ..++.+ .
T Consensus 36 ~~I~ql~vl~-~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~ 112 (275)
T PF00780_consen 36 SSITQLSVLP-ELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-V 112 (275)
T ss_pred ceEEEEEEec-ccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEE-E
Confidence 3477788888 556665555 4899999987543322110 000 0000022344444 12333 344444 4
Q ss_pred CCeEEEEECCCC-----eEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 74 DRHIRFFDNVSG-----KLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 74 d~~i~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
...|.+|..... +..+.+. -...+..++|.+ +.++.+
T Consensus 113 kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~--~~i~v~ 154 (275)
T PF00780_consen 113 KKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLG--NKICVG 154 (275)
T ss_pred CCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeC--CEEEEE
Confidence 558888876542 3444444 345678888873 344443
No 452
>KOG4441|consensus
Probab=83.78 E-value=11 Score=25.65 Aligned_cols=63 Identities=14% Similarity=0.035 Sum_probs=35.2
Q ss_pred CcEEEEeeCC------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE-cCCCCEEEEEeCCC-----eEEEEECCC
Q psy17133 17 STKMVTAFDN------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC-HPTLPLTITAHDDR-----HIRFFDNVS 84 (116)
Q Consensus 17 ~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~d~-----~i~~~~~~~ 84 (116)
+...++|+.+ ..+..||..+++... +..- ...-..... .-+|.+.+.|+.|+ .+-.||..+
T Consensus 333 ~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M------~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~ 405 (571)
T KOG4441|consen 333 GKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPM------NTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVT 405 (571)
T ss_pred CEEEEEccccCCCcccceEEEecCCCCceec-cCCc------cCccccceeEEECCEEEEEeccccccccccEEEecCCC
Confidence 3666777766 346788887665332 2111 011111212 23577788888775 377788765
Q ss_pred Ce
Q psy17133 85 GK 86 (116)
Q Consensus 85 ~~ 86 (116)
.+
T Consensus 406 ~~ 407 (571)
T KOG4441|consen 406 NK 407 (571)
T ss_pred Cc
Confidence 43
No 453
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=83.43 E-value=5.4 Score=21.63 Aligned_cols=84 Identities=7% Similarity=0.037 Sum_probs=48.0
Q ss_pred EEEccCCCcEEEEeeCCCeEEEEECCCC--------ceeEEEecCCcCcCCCCceeEEEEcC---C-CC-EEEEEeCCCe
Q psy17133 10 IDFVRDESTKMVTAFDNSACVLFDLETG--------KPVVRIDSSQFGVSGGGGINRVVCHP---T-LP-LTITAHDDRH 76 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~-~~~~~~~d~~ 76 (116)
-.|.. ....|+.+...++|.+.+.... ..+..+.-. ..|++++-.+ + ++ .|+.+ ....
T Consensus 4 GkfDG-~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin-------~~italaaG~l~~~~~~D~LliG-t~t~ 74 (136)
T PF14781_consen 4 GKFDG-VHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNIN-------QEITALAAGRLKPDDGRDCLLIG-TQTS 74 (136)
T ss_pred EEeCC-CceeEEEEecCCEEEEECCCccccccccccCceeEEECC-------CceEEEEEEecCCCCCcCEEEEe-ccce
Confidence 35655 4567788888899999986532 223344333 3466664433 2 33 44444 4678
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEE
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAV 103 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~ 103 (116)
+..||++...-+.... -...+.++.+
T Consensus 75 llaYDV~~N~d~Fyke-~~DGvn~i~~ 100 (136)
T PF14781_consen 75 LLAYDVENNSDLFYKE-VPDGVNAIVI 100 (136)
T ss_pred EEEEEcccCchhhhhh-CccceeEEEE
Confidence 9999988655443222 2234555555
No 454
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=83.06 E-value=4.9 Score=24.65 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=28.2
Q ss_pred CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
...|++||..+.+-...-..-.+.|+.+.|..+.+.++.|.
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ 55 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGN 55 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEe
Confidence 34688899887766555545567888888886666666553
No 455
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=82.87 E-value=9.3 Score=23.97 Aligned_cols=76 Identities=21% Similarity=0.212 Sum_probs=52.9
Q ss_pred CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC------CCCEEEEEeCCCeEEEEECCCCeEEEEeeccc---
Q psy17133 25 DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP------TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL--- 95 (116)
Q Consensus 25 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~--- 95 (116)
..+.|-+||.. ++.++++..... -...+.++..| .+.+|+---.||+|..+|..+++.+..+....
T Consensus 220 G~G~VdvFd~~-G~l~~r~as~g~----LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~p 294 (336)
T TIGR03118 220 GLGYVNVFTLN-GQLLRRVASSGR----LNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHP 294 (336)
T ss_pred CcceEEEEcCC-CcEEEEeccCCc----ccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCe
Confidence 34678899976 777877743311 34567777765 45677766679999999999998887776432
Q ss_pred ---ccEEEEEECC
Q psy17133 96 ---DAVTSLAVDP 105 (116)
Q Consensus 96 ---~~v~~~~~~~ 105 (116)
..++.+.|-.
T Consensus 295 i~i~GLWgL~fGn 307 (336)
T TIGR03118 295 VKVDGLWSLTFGN 307 (336)
T ss_pred EEecCeEEeeeCC
Confidence 2457777744
No 456
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=82.41 E-value=15 Score=25.94 Aligned_cols=73 Identities=10% Similarity=0.099 Sum_probs=45.5
Q ss_pred CCceEEEEc--cCCCcEEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCC---C---EEEEEeCCC
Q psy17133 5 GTPTSIDFV--RDESTKMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTL---P---LTITAHDDR 75 (116)
Q Consensus 5 ~~v~~~~~~--~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~---~---~~~~~~~d~ 75 (116)
..++++++. . ..++|++++....|.+|-........ .-+.+ .+...|.+++|-++. . ++++++-.|
T Consensus 164 ~SaWGLdIh~~~-~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~----~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G 238 (717)
T PF08728_consen 164 ASAWGLDIHDYK-KSRLIAVSSNSQEVTVFAFALVDERFYHVPSH----QHSHNIPNVSFLDDDLDPNGHVKVVATDISG 238 (717)
T ss_pred CceeEEEEEecC-cceEEEEecCCceEEEEEEecccccccccccc----ccccCCCeeEeecCCCCCccceEEEEEeccC
Confidence 456778887 5 56788888877888877654211111 10011 113458888887643 2 677788889
Q ss_pred eEEEEEC
Q psy17133 76 HIRFFDN 82 (116)
Q Consensus 76 ~i~~~~~ 82 (116)
.+.+|++
T Consensus 239 ~v~~~~I 245 (717)
T PF08728_consen 239 EVWTFKI 245 (717)
T ss_pred cEEEEEE
Confidence 9888887
No 457
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=82.20 E-value=15 Score=26.01 Aligned_cols=74 Identities=18% Similarity=0.125 Sum_probs=48.2
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE----ecCCc-------Cc--CCCCceeEEEEcCCCCEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI----DSSQF-------GV--SGGGGINRVVCHPTLPLTIT 70 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~----~~~~~-------~~--~~~~~i~~~~~~~~~~~~~~ 70 (116)
.+.|.++.... -+..++....||.|.++|..+.+.+... ..... +. ..-....-++++|++..++.
T Consensus 259 ~~~V~si~~~~-~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~ 337 (753)
T PF11635_consen 259 NKRVVSITSPE-LDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQ 337 (753)
T ss_pred CCeEEEEEecc-cCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEE
Confidence 46677777655 5578888899999999999887665544 11100 00 00112334779999888888
Q ss_pred EeCCCeEE
Q psy17133 71 AHDDRHIR 78 (116)
Q Consensus 71 ~~~d~~i~ 78 (116)
...++.+.
T Consensus 338 ~~~~~~~~ 345 (753)
T PF11635_consen 338 IDEDGKTK 345 (753)
T ss_pred EecCCCce
Confidence 87777755
No 458
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=82.18 E-value=16 Score=26.08 Aligned_cols=75 Identities=17% Similarity=0.202 Sum_probs=44.6
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcC-----cC-CCCceeEEEEcC--CCCEEEEEeC----------CCeEEE
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-----VS-GGGGINRVVCHP--TLPLTITAHD----------DRHIRF 79 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-----~~-~~~~i~~~~~~~--~~~~~~~~~~----------d~~i~~ 79 (116)
..++.++.|+.+.-.|..+|+....+...... .. .......+.-.| .+..++.++. ++.|+-
T Consensus 261 ~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A 340 (764)
T TIGR03074 261 RRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRA 340 (764)
T ss_pred CEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEE
Confidence 47778888999999999999988766432100 00 000000111122 1234444432 588999
Q ss_pred EECCCCeEEEEee
Q psy17133 80 FDNVSGKLVHSMV 92 (116)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (116)
+|.++|+.+-.+.
T Consensus 341 ~Da~TGkl~W~~~ 353 (764)
T TIGR03074 341 FDVNTGALVWAWD 353 (764)
T ss_pred EECCCCcEeeEEe
Confidence 9999999887764
No 459
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=81.88 E-value=9.9 Score=23.56 Aligned_cols=39 Identities=21% Similarity=0.265 Sum_probs=30.8
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS 46 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~ 46 (116)
+.++...+ ++++|+++-.-..|.+.+..+++.+-.+.+.
T Consensus 146 iNsV~~~~-~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 146 INSVDKDD-DGDYLISSRNTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred eeeeeecC-CccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence 45566666 6789998888888999998889888887655
No 460
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=81.75 E-value=3.6 Score=18.45 Aligned_cols=18 Identities=22% Similarity=0.422 Sum_probs=13.7
Q ss_pred cEEEEEECCCCcEEEeee
Q psy17133 97 AVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 97 ~v~~~~~~~~~~~l~~~s 114 (116)
...+++..|||++++.+.
T Consensus 2 ~~~~~~~q~DGkIlv~G~ 19 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGY 19 (55)
T ss_pred ceEEEEECCCCcEEEEEE
Confidence 356778888999888774
No 461
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=81.68 E-value=12 Score=24.33 Aligned_cols=59 Identities=7% Similarity=-0.068 Sum_probs=35.5
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe-----EEEEeec--ccccEEEEEECCCCcEEEeee
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK-----LVHSMVA--HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~-----~~~~~~~--~~~~v~~~~~~~~~~~l~~~s 114 (116)
..+..+.+.+++.+++.+ ..+.+.. ....++ ....... ....+..+.|.+++..+++|.
T Consensus 281 ~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~ 346 (398)
T PLN00033 281 RRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGG 346 (398)
T ss_pred cceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEEC
Confidence 468889999998877665 4455443 333343 1222221 123478888988888777653
No 462
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=81.57 E-value=2.8 Score=16.98 Aligned_cols=20 Identities=10% Similarity=0.125 Sum_probs=14.1
Q ss_pred CcEEEEeeCCCeEEEEECCC
Q psy17133 17 STKMVTAFDNSACVLFDLET 36 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~ 36 (116)
+..++.++.++.++.+|.++
T Consensus 21 ~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT-
T ss_pred CCEEEEEcCCCEEEEEeCCC
Confidence 35777788889999888753
No 463
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=81.12 E-value=10 Score=23.16 Aligned_cols=88 Identities=14% Similarity=0.016 Sum_probs=52.1
Q ss_pred eEEEEccCCCcEEEEeeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133 8 TSIDFVRDESTKMVTAFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 85 (116)
..+.|.. ++.++-+.+..| .++.+|+.+++.+....-.. .-.-..+....+ ++.--.=.++...+||..+-
T Consensus 48 QGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~-----~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~tl 120 (264)
T PF05096_consen 48 QGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPP-----RYFGEGITILGD-KLYQLTWKEGTGFVYDPNTL 120 (264)
T ss_dssp EEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TT-----T--EEEEEEETT-EEEEEESSSSEEEEEETTTT
T ss_pred ccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCc-----cccceeEEEECC-EEEEEEecCCeEEEEccccc
Confidence 4566755 556666666544 68999999998776655431 112233444332 23333335789999999988
Q ss_pred eEEEEeecccccEEEEEE
Q psy17133 86 KLVHSMVAHLDAVTSLAV 103 (116)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~ 103 (116)
+.+..+.- .+.-..++.
T Consensus 121 ~~~~~~~y-~~EGWGLt~ 137 (264)
T PF05096_consen 121 KKIGTFPY-PGEGWGLTS 137 (264)
T ss_dssp EEEEEEE--SSS--EEEE
T ss_pred eEEEEEec-CCcceEEEc
Confidence 88887752 345566663
No 464
>KOG3616|consensus
Probab=81.03 E-value=5.8 Score=28.22 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=27.9
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
..++++.-+|.+..++.+..|+.|.+|+....+.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~q 48 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQ 48 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccch
Confidence 3567888889999999999999999999765443
No 465
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=80.74 E-value=15 Score=24.84 Aligned_cols=68 Identities=21% Similarity=0.131 Sum_probs=45.0
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCcee----------EEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGIN----------RVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~----------~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
..+++++.++.|+-+|..+|+.+-++..... ..+. .+.+ .+..++.++.++.+.-.|.++|+.
T Consensus 70 g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~-----~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~ 142 (527)
T TIGR03075 70 GVMYVTTSYSRVYALDAKTGKELWKYDPKLP-----DDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKV 142 (527)
T ss_pred CEEEEECCCCcEEEEECCCCceeeEecCCCC-----cccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCE
Confidence 4566666778899999999988877654311 0111 1111 234566677889999999999988
Q ss_pred EEEee
Q psy17133 88 VHSMV 92 (116)
Q Consensus 88 ~~~~~ 92 (116)
+....
T Consensus 143 ~W~~~ 147 (527)
T TIGR03075 143 VWSKK 147 (527)
T ss_pred Eeecc
Confidence 76543
No 466
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=80.12 E-value=11 Score=27.21 Aligned_cols=59 Identities=14% Similarity=0.092 Sum_probs=38.8
Q ss_pred CCCCceEEEEccCCCcEEEE-ee-C----CCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVT-AF-D----NSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT 68 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~-~~-~----~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (116)
....+..-.|+| +++.++. .+ + ...|++-++.+ +..+.+++.. ...|....+..+|..+
T Consensus 348 ~~~~i~sP~~SP-DG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve------~aaiprwrv~e~gdt~ 413 (912)
T TIGR02171 348 DTISVYHPDISP-DGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVE------NAAIPRWRVLENGDTV 413 (912)
T ss_pred CCCceecCcCCC-CCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecc------cccccceEecCCCCeE
Confidence 345677889999 7888877 22 2 23488888874 4445566655 4567777777777643
No 467
>KOG4441|consensus
Probab=79.93 E-value=17 Score=24.92 Aligned_cols=65 Identities=11% Similarity=-0.009 Sum_probs=35.4
Q ss_pred CcEEEEeeCC------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC------CeEEEEECCC
Q psy17133 17 STKMVTAFDN------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD------RHIRFFDNVS 84 (116)
Q Consensus 17 ~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d------~~i~~~~~~~ 84 (116)
+..++.|+.. ..+..||..++.....-.-.. ...-.+++.. ++.+.++|+.+ ..+..||..+
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~-----~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~ 358 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPS-----PRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRT 358 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCc-----ccccccEEEE-CCEEEEEccccCCCcccceEEEecCCC
Confidence 4556666654 457788887664332221111 1122333333 45667777777 3577888876
Q ss_pred CeE
Q psy17133 85 GKL 87 (116)
Q Consensus 85 ~~~ 87 (116)
.+-
T Consensus 359 ~~W 361 (571)
T KOG4441|consen 359 NQW 361 (571)
T ss_pred Cce
Confidence 653
No 468
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=79.55 E-value=9.7 Score=26.43 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=0.0
Q ss_pred ceeEEEEcCCCCEEEE-----EeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 55 GINRVVCHPTLPLTIT-----AHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~-----~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+-.++++||.++++- +.+.-.+++-|+.+++.+-.. -.+....++|.+|++.|.-...|
T Consensus 130 ~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~--i~~~~~~~~Wa~d~~~lfYt~~d 194 (682)
T COG1770 130 SLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDE--ITNTSGSFAWAADGKTLFYTRLD 194 (682)
T ss_pred eeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchh--hcccccceEEecCCCeEEEEEEc
No 469
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=78.72 E-value=13 Score=22.94 Aligned_cols=74 Identities=11% Similarity=0.089 Sum_probs=45.3
Q ss_pred CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe------CCCeEEEEECCCCeEEEEeec----c
Q psy17133 25 DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH------DDRHIRFFDNVSGKLVHSMVA----H 94 (116)
Q Consensus 25 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~d~~i~~~~~~~~~~~~~~~~----~ 94 (116)
....+.+||..+.+.. .+-... .+.|..+.|..+.++++.|. ....+..||..+......-.+ -
T Consensus 14 ~C~~lC~yd~~~~qW~-~~g~~i-----~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~i 87 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWS-SPGNGI-----SGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSI 87 (281)
T ss_pred CCCEEEEEECCCCEee-cCCCCc-----eEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccC
Confidence 3556899998755433 332221 57899999987677777664 345688899876643222111 1
Q ss_pred cccEEEEEEC
Q psy17133 95 LDAVTSLAVD 104 (116)
Q Consensus 95 ~~~v~~~~~~ 104 (116)
.+++..+.+.
T Consensus 88 pgpv~a~~~~ 97 (281)
T PF12768_consen 88 PGPVTALTFI 97 (281)
T ss_pred CCcEEEEEee
Confidence 3566666663
No 470
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=78.59 E-value=14 Score=23.22 Aligned_cols=50 Identities=18% Similarity=0.249 Sum_probs=33.9
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE---EEEee----cccccEEEEEECCC
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL---VHSMV----AHLDAVTSLAVDPQ 106 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~---~~~~~----~~~~~v~~~~~~~~ 106 (116)
....++|.|+++++++- ..|.|++++ ..+.. +..+. ........++++|+
T Consensus 3 ~P~~~a~~pdG~l~v~e-~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAE-RSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp SEEEEEEETTSCEEEEE-TTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred CceEEEEeCCCcEEEEe-CCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence 46789999999877764 499999999 44443 22221 23456789999994
No 471
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=78.28 E-value=13 Score=22.94 Aligned_cols=63 Identities=5% Similarity=0.001 Sum_probs=39.8
Q ss_pred CcEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 17 STKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+++++.|.....+.++.... .+.+..+..... ...+.++.+-+++..++.+..++.+.++...
T Consensus 139 ~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~----~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 139 KNYILVGDAMKSVSLLRYDEENNKLILVARDYQ----PRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-----BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred ccEEEEEEcccCEEEEEEEccCCEEEEEEecCC----CccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 46888888777777764432 333333322211 3457778777666788999999999998765
No 472
>PHA03098 kelch-like protein; Provisional
Probab=78.08 E-value=18 Score=24.24 Aligned_cols=24 Identities=8% Similarity=0.088 Sum_probs=15.0
Q ss_pred CCCEEEEEeCC------CeEEEEECCCCeE
Q psy17133 64 TLPLTITAHDD------RHIRFFDNVSGKL 87 (116)
Q Consensus 64 ~~~~~~~~~~d------~~i~~~~~~~~~~ 87 (116)
++++.+.|+.+ +.+..||+.+.+-
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W 418 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKW 418 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCee
Confidence 46666666531 4578888876543
No 473
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=78.08 E-value=15 Score=23.26 Aligned_cols=84 Identities=14% Similarity=0.071 Sum_probs=51.2
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC--------------------C
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD--------------------R 75 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d--------------------~ 75 (116)
+++..+.-+..+.+..+|.++|+........ +....++|. |.+++.+-.. .
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vp-------G~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~C 282 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLP-------GFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGC 282 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEECC-------CCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcc
Confidence 3456666667788888887766543332222 345666665 6655443221 1
Q ss_pred eEEEEECCCCeEEEEee--cccccEEEEEECCCCc
Q psy17133 76 HIRFFDNVSGKLVHSMV--AHLDAVTSLAVDPQGL 108 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 108 (116)
-+.+.|+.+|..+..+. +.-..+.+++.-|.-+
T Consensus 283 Gv~vidl~tG~vv~~l~feg~v~EifdV~vLPg~r 317 (335)
T TIGR03032 283 GVAVIDLNSGDVVHWLRFEGVIEEIYDVAVLPGVR 317 (335)
T ss_pred cEEEEECCCCCEEEEEEeCCceeEEEEEEEecCCC
Confidence 27788999999877665 3345677888777533
No 474
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=77.28 E-value=18 Score=23.79 Aligned_cols=23 Identities=13% Similarity=0.163 Sum_probs=18.8
Q ss_pred cCCCcEEEEeeCCCeEEEEECCC
Q psy17133 14 RDESTKMVTAFDNSACVLFDLET 36 (116)
Q Consensus 14 ~~~~~~l~~~~~~~~v~i~~~~~ 36 (116)
+++.++|++|+..|.++||+...
T Consensus 34 ~~~~d~IivGS~~G~LrIy~P~~ 56 (418)
T PF14727_consen 34 PSGSDKIIVGSYSGILRIYDPSG 56 (418)
T ss_pred CCCccEEEEeccccEEEEEccCC
Confidence 33567999999999999999864
No 475
>PRK13684 Ycf48-like protein; Provisional
Probab=77.17 E-value=15 Score=23.05 Aligned_cols=58 Identities=9% Similarity=0.092 Sum_probs=33.3
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEE-EECCCCeEE-EEeecccccEEEEEECCCCcEEEee
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRF-FDNVSGKLV-HSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~-~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+.+..+.+.|++.+++.+. .|.+.. ++ ..++.- .........+..+.+.++++.++.+
T Consensus 173 g~~~~i~~~~~g~~v~~g~-~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg 232 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVSS-RGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA 232 (334)
T ss_pred ceEEEEEECCCCeEEEEeC-CceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe
Confidence 4678888889887665554 444432 22 222222 2222334567888888888766543
No 476
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=77.06 E-value=16 Score=23.06 Aligned_cols=75 Identities=11% Similarity=0.073 Sum_probs=47.1
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECC------CC-ceeEEEecCCcCcCCCCceeEEEEcCCCCE-----------
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLE------TG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPL----------- 67 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~------~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------- 67 (116)
....++++| .+.+.++....+...+||.. .. ..+..+..... .......+.+.|+....+
T Consensus 24 N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~-~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 24 NAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPP-LAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred ccceeEecC-CCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCC-CCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 456789999 77888887788899999986 12 22334432110 001234666666643222
Q ss_pred -EEEEeCCCeEEEEEC
Q psy17133 68 -TITAHDDRHIRFFDN 82 (116)
Q Consensus 68 -~~~~~~d~~i~~~~~ 82 (116)
++.++++|+|.-|..
T Consensus 102 ~Fif~tEdGTisaW~p 117 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAP 117 (336)
T ss_pred eEEEEeCCceEEeecC
Confidence 566788999999985
No 477
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=77.00 E-value=13 Score=22.12 Aligned_cols=71 Identities=8% Similarity=-0.057 Sum_probs=39.3
Q ss_pred CCcEEEEee--CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEECCCCeEEEEee
Q psy17133 16 ESTKMVTAF--DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 16 ~~~~l~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
++..+.+.+ ....|++||+.+++.+..-+-. ...+..-.+..-+..+.. .-.++....+|..+-+.+..+.
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~------~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~ 128 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLA------PDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS 128 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecC------CccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc
Confidence 345555554 3567999999988877665443 112222222222333332 2246777788877666555443
No 478
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=72.75 E-value=0.69 Score=16.75 Aligned_cols=8 Identities=25% Similarity=0.588 Sum_probs=5.5
Q ss_pred EECCCCcE
Q psy17133 102 AVDPQGLY 109 (116)
Q Consensus 102 ~~~~~~~~ 109 (116)
.|||+|+.
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 37888774
No 479
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=72.44 E-value=13 Score=20.15 Aligned_cols=67 Identities=16% Similarity=0.247 Sum_probs=49.3
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCcee-----------EEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 19 KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGIN-----------RVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 19 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~-----------~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
..+....++.+.+++..+++.+..+..... +.+. ......+.++-...-+||.+.+-|..|++.
T Consensus 43 l~f~d~~~G~v~V~~~~~G~~va~~~~g~~-----GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~ 117 (135)
T TIGR03054 43 LVFEDRPDGAVAVVETPDGRLVAILEPGQN-----GFVRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWS 117 (135)
T ss_pred EEEecCCCCeEEEEECCCCCEEEEecCCCC-----chhhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcE
Confidence 445566789999999999999999865532 2222 123456677888999999999999998876
Q ss_pred EEE
Q psy17133 88 VHS 90 (116)
Q Consensus 88 ~~~ 90 (116)
+..
T Consensus 118 i~L 120 (135)
T TIGR03054 118 IEL 120 (135)
T ss_pred EEE
Confidence 543
No 480
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=72.36 E-value=19 Score=21.92 Aligned_cols=43 Identities=7% Similarity=0.118 Sum_probs=29.6
Q ss_pred CCCceEEEEccC------CCcEEEEeeCCCeEEEEECCCCceeEEEecC
Q psy17133 4 NGTPTSIDFVRD------ESTKMVTAFDNSACVLFDLETGKPVVRIDSS 46 (116)
Q Consensus 4 ~~~v~~~~~~~~------~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~ 46 (116)
...|+|++--.. .-..++.|.+++.+++.|...-..+..+...
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lp 224 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLP 224 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecC
Confidence 445666653221 2357899999999999999876666666544
No 481
>KOG2280|consensus
Probab=72.31 E-value=33 Score=24.54 Aligned_cols=30 Identities=7% Similarity=0.298 Sum_probs=21.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLE 35 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~ 35 (116)
.+.+-.+.|+. + ..|++-..+|.+++|++-
T Consensus 83 ~~~lI~mgWs~-~-eeLI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 83 HGELIGMGWSD-D-EELICVQKDGTVHVYGLL 112 (829)
T ss_pred CCCeeeecccC-C-ceEEEEeccceEEEeecc
Confidence 44677788875 3 666667788888888864
No 482
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=71.92 E-value=34 Score=24.55 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=48.4
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcC-C-CCceeEEEEc----------------CCCCEEEEEeCCCeEEE
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVS-G-GGGINRVVCH----------------PTLPLTITAHDDRHIRF 79 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~-~-~~~i~~~~~~----------------~~~~~~~~~~~d~~i~~ 79 (116)
..+..++.++.|+-.|..+|+.+-++........ . ......+.+. ..+..++.++.|+.+.-
T Consensus 195 g~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiA 274 (764)
T TIGR03074 195 DTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIA 274 (764)
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEE
Confidence 5677777788999999999998877765422100 0 0001122221 12346777888999999
Q ss_pred EECCCCeEEEEee
Q psy17133 80 FDNVSGKLVHSMV 92 (116)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (116)
.|.++|+....+.
T Consensus 275 LDA~TGk~~W~fg 287 (764)
T TIGR03074 275 LDADTGKLCEDFG 287 (764)
T ss_pred EECCCCCEEEEec
Confidence 9999999886653
No 483
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=69.83 E-value=30 Score=23.10 Aligned_cols=80 Identities=18% Similarity=0.139 Sum_probs=41.7
Q ss_pred CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc---cEEEE
Q psy17133 25 DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD---AVTSL 101 (116)
Q Consensus 25 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~---~v~~~ 101 (116)
......++|.. |..+..+.... .....+..-++|.+++... ..+..+|+. |+.+..+..... .-..+
T Consensus 126 ~~~~~~~iD~~-G~Vrw~~~~~~------~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~ 195 (477)
T PF05935_consen 126 SSSYTYLIDNN-GDVRWYLPLDS------GSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDI 195 (477)
T ss_dssp BEEEEEEEETT-S-EEEEE-GGG------T--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-E
T ss_pred CCceEEEECCC-ccEEEEEccCc------cccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCccccccccc
Confidence 35567777865 76666655441 1111156678888887665 788888876 766655542221 12456
Q ss_pred EECCCCcEEEeee
Q psy17133 102 AVDPQGLYILSGT 114 (116)
Q Consensus 102 ~~~~~~~~l~~~s 114 (116)
...|+|++|+.+.
T Consensus 196 ~~l~nGn~L~l~~ 208 (477)
T PF05935_consen 196 DELPNGNLLILAS 208 (477)
T ss_dssp EE-TTS-EEEEEE
T ss_pred EECCCCCEEEEEe
Confidence 7789999988765
No 484
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=69.82 E-value=30 Score=23.06 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=49.0
Q ss_pred EEccCCCcEEEEee------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133 11 DFVRDESTKMVTAF------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---------- 74 (116)
Q Consensus 11 ~~~~~~~~~l~~~~------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---------- 74 (116)
...| ++++++++- .-+.+.++|-++.+.....+..... ...-..+.+.|....+++...-
T Consensus 136 Hclp-~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~---~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~ 211 (461)
T PF05694_consen 136 HCLP-DGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGP---QPFGYDFWYQPRHNVMISSEWGAPSMFEKGFN 211 (461)
T ss_dssp EE-S-S--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT---------EEEETTTTEEEE-B---HHHHTT---
T ss_pred eecC-CccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCC---CCCCCCeEEcCCCCEEEEeccCChhhcccCCC
Confidence 3346 667776642 2345778888877777777654210 2234567778887888876532
Q ss_pred ----------CeEEEEECCCCeEEEEeeccc--ccEEEEEE--CCCCcEE
Q psy17133 75 ----------RHIRFFDNVSGKLVHSMVAHL--DAVTSLAV--DPQGLYI 110 (116)
Q Consensus 75 ----------~~i~~~~~~~~~~~~~~~~~~--~~v~~~~~--~~~~~~l 110 (116)
..+.+||+.+++.++.+.-.. ..+..+.| .|+..+=
T Consensus 212 ~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g 261 (461)
T PF05694_consen 212 PEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG 261 (461)
T ss_dssp TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE
T ss_pred hhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce
Confidence 579999999999999886322 23455666 4554443
No 485
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=69.60 E-value=32 Score=23.38 Aligned_cols=18 Identities=17% Similarity=0.145 Sum_probs=14.3
Q ss_pred CCceeEEEEcCCCCEEEE
Q psy17133 53 GGGINRVVCHPTLPLTIT 70 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~ 70 (116)
...++.++|+||++.++.
T Consensus 501 gaE~tG~~fspDg~tlFv 518 (524)
T PF05787_consen 501 GAEITGPCFSPDGRTLFV 518 (524)
T ss_pred CcccccceECCCCCEEEE
Confidence 467889999999887655
No 486
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=69.54 E-value=31 Score=23.06 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=27.7
Q ss_pred ceeEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEeecc
Q psy17133 55 GINRVVCHP-TLPLTITAHDDRHIRFFDNVSGKLVHSMVAH 94 (116)
Q Consensus 55 ~i~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~ 94 (116)
.++++.+.+ ++.+++++-.-..|...|.++++....+..+
T Consensus 272 H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~ 312 (477)
T PF05935_consen 272 HINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPP 312 (477)
T ss_dssp -EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-S
T ss_pred ccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCC
Confidence 578999998 5667777766778999998888887777643
No 487
>KOG1520|consensus
Probab=69.39 E-value=6.7 Score=25.14 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=25.7
Q ss_pred CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133 25 DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH 72 (116)
Q Consensus 25 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (116)
.+|++..||..+......+..- ...+.++.+||+.+++.+-
T Consensus 197 ~~GRl~~YD~~tK~~~VLld~L-------~F~NGlaLS~d~sfvl~~E 237 (376)
T KOG1520|consen 197 PTGRLFRYDPSTKVTKVLLDGL-------YFPNGLALSPDGSFVLVAE 237 (376)
T ss_pred CccceEEecCcccchhhhhhcc-------cccccccCCCCCCEEEEEe
Confidence 4566777776654433333332 3567899999998776653
No 488
>KOG2727|consensus
Probab=69.29 E-value=11 Score=27.51 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=49.7
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE-------cCC-CC----EEEEEeCCC
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC-------HPT-LP----LTITAHDDR 75 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~-~~----~~~~~~~d~ 75 (116)
..++.+| ++.+.++...-++|.+.|+.....+..++|.+. ..+.-+.. .|. .+ +++.+-..|
T Consensus 325 e~lslSP-~gtlAAVTD~lgRVlLlDta~~ivvr~wKGYRD-----Asc~fv~vkek~~~s~~~~sRvAlFLvIyAPRrg 398 (1244)
T KOG2727|consen 325 EKLSLSP-SGTLAAVTDSLGRVLLLDTAALIVVRLWKGYRD-----ASCVFVEVKEKKGKSEPVKSRVALFLVIYAPRRG 398 (1244)
T ss_pred ceeeeCC-CccEEEEecccCcEEEEehhhhhHHHHhccccc-----ceeEEEEcccccCCCccCcCceeEEEEEeccccc
Confidence 4577899 788888888889999999988888888888753 12222220 111 11 122244466
Q ss_pred eEEEEECCCCeEEEEe
Q psy17133 76 HIRFFDNVSGKLVHSM 91 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~ 91 (116)
.+-+|.+++|..+..+
T Consensus 399 iLEVW~~q~gpRV~Af 414 (1244)
T KOG2727|consen 399 ILEVWQMQTGPRVLAF 414 (1244)
T ss_pred HHHHHHhccCCeEEEE
Confidence 7778887777555444
No 489
>KOG3522|consensus
Probab=65.27 E-value=25 Score=25.43 Aligned_cols=103 Identities=8% Similarity=0.104 Sum_probs=0.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-----CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-----TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
.....+.++.+++ .-+..|..|+.+-.|--. ++.+...+... ..++....+..| +..++.+|.
T Consensus 579 pe~~~v~~l~~ss---~Slgagl~dgt~a~y~rap~gSwd~ep~~~~~~g------~lPvrsla~~ed---~~was~gG~ 646 (925)
T KOG3522|consen 579 PEHESVKLLLFSS---GSLGAGLIDGTLAVYGRAPSGSWDGEPNISIPTG------SLPVRSLAFQED---FVWASEGGC 646 (925)
T ss_pred Cchhhhhhhhccc---cccccCccCCccccccCCCCCCCCCCCccccccC------Cccccchhhhhc---eeeeecCCc
Q ss_pred EEEEECCCCeEEEEee---cccccEEEEEECCCCcEEEeeecC
Q psy17133 77 IRFFDNVSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.++...+........ .+...|+.|.....+-+++.++.|
T Consensus 647 V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~ 689 (925)
T KOG3522|consen 647 VHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGD 689 (925)
T ss_pred eEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCC
No 490
>PHA02790 Kelch-like protein; Provisional
Probab=65.24 E-value=38 Score=22.59 Aligned_cols=22 Identities=14% Similarity=0.143 Sum_probs=12.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 63 PTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 63 ~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
-++++.+.|+ ...+||.++.+-
T Consensus 406 ~~~~IYv~GG---~~e~ydp~~~~W 427 (480)
T PHA02790 406 FGRRLFLVGR---NAEFYCESSNTW 427 (480)
T ss_pred ECCEEEEECC---ceEEecCCCCcE
Confidence 3455555553 466788776544
No 491
>KOG1898|consensus
Probab=64.33 E-value=59 Score=24.46 Aligned_cols=72 Identities=11% Similarity=0.119 Sum_probs=42.2
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC------CEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL------PLTITAHDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~d~~i~~~~~~~~~~~~~~ 91 (116)
..++.+-.++.+..+......++.++..+.. -+..+.++++.++. ++++.++.|+.+++..+.....+..+
T Consensus 550 ~qiVvalSngelvyfe~d~sgql~E~~er~t---l~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d~l~~l 626 (1205)
T KOG1898|consen 550 RQIVVALSNGELVYFEGDVSGQLNEFTERVT---LSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQPL 626 (1205)
T ss_pred eEEEEEccCCeEEEEEeccCccceeeeeeee---eceeehhhccCCCCcchhhcceeeeeccccceeEEEecCcceEEEc
Confidence 4444444555555554432333334422111 03457788887654 47899999999999988765555554
Q ss_pred e
Q psy17133 92 V 92 (116)
Q Consensus 92 ~ 92 (116)
.
T Consensus 627 s 627 (1205)
T KOG1898|consen 627 S 627 (1205)
T ss_pred c
Confidence 3
No 492
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=64.31 E-value=33 Score=21.51 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=43.5
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
+....++-.|||...+++...+.|---|..+|+....-.+.......+..-|||...++
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Wit 120 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWIT 120 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEe
Confidence 34667788889988888888888888888888876654445555667777887765443
No 493
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=63.98 E-value=38 Score=22.06 Aligned_cols=30 Identities=27% Similarity=0.303 Sum_probs=24.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
.+..+...+..+.+++...++.|.+|++..
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 488889888889999999999999999974
No 494
>KOG1983|consensus
Probab=63.50 E-value=42 Score=24.95 Aligned_cols=26 Identities=31% Similarity=0.379 Sum_probs=23.1
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 62 HPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 62 ~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
.+++..++++..|+.+..||...+..
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCce
Confidence 67789999999999999999987755
No 495
>KOG1900|consensus
Probab=61.00 E-value=74 Score=24.49 Aligned_cols=85 Identities=14% Similarity=0.199 Sum_probs=46.4
Q ss_pred CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc--------CCCCEEEEEeCCCeEEEEECC----CCeEE----
Q psy17133 25 DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH--------PTLPLTITAHDDRHIRFFDNV----SGKLV---- 88 (116)
Q Consensus 25 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~d~~i~~~~~~----~~~~~---- 88 (116)
.|..+.+|+.+++.....+.+- ...|..+.+- |.=+++.....--.+.++-+. ++..-
T Consensus 97 iDn~L~lWny~~~~e~~~~d~~------shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~ 170 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNELAEYDGL------SHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNT 170 (1311)
T ss_pred eCCeEEEEEcCCCCccccccch------hhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCccccccc
Confidence 3778999999987666666554 3344444332 222233333333344444322 11110
Q ss_pred -EEeecccccEEEEEECCCCcEEEeeec
Q psy17133 89 -HSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 89 -~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.++......|+++....+|+.+++|-.
T Consensus 171 ~~~i~~dg~~V~~I~~t~nGRIF~~G~d 198 (1311)
T KOG1900|consen 171 SFKISVDGVSVNCITYTENGRIFFAGRD 198 (1311)
T ss_pred ceeeecCCceEEEEEeccCCcEEEeecC
Confidence 112223446888888889999988754
No 496
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=60.47 E-value=39 Score=21.07 Aligned_cols=40 Identities=20% Similarity=0.215 Sum_probs=33.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH 94 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~ 94 (116)
.++++...++|.+|++.-.-..|.+.+-++|+.+..+.+.
T Consensus 145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence 4677888888999999988889999999999888877644
No 497
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=60.19 E-value=38 Score=20.91 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=39.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEEEEeec--c-cccEEEEEECC--CCcEEEee
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSG---KLVHSMVA--H-LDAVTSLAVDP--QGLYILSG 113 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~---~~~~~~~~--~-~~~v~~~~~~~--~~~~l~~~ 113 (116)
....+.++++|.+.++--..+.|..|+..+. +....+.. . -..+..+.+.+ +|...+..
T Consensus 187 ~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s 253 (287)
T PF03022_consen 187 QSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS 253 (287)
T ss_dssp SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred CCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence 4567888899999999999999999998751 11222221 1 34678999998 77655543
No 498
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=58.72 E-value=38 Score=20.34 Aligned_cols=49 Identities=22% Similarity=0.334 Sum_probs=27.7
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEee------------cccccEEEEEECCCC-cEEEee
Q psy17133 65 LPLTITAHDDRHIRFFDNVSGKLVHSMV------------AHLDAVTSLAVDPQG-LYILSG 113 (116)
Q Consensus 65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~-~~l~~~ 113 (116)
|.+.+-.=.+..|...+.++|+.+..+. .+..-...+++.|++ ++++||
T Consensus 186 G~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 186 GELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred cEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 4444433334455555666776655432 123456789999987 455554
No 499
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=57.87 E-value=51 Score=21.60 Aligned_cols=101 Identities=11% Similarity=-0.025 Sum_probs=55.5
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-----eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-----VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
..+.++.|.+ ++..++++ ..+.+.. ....++. ......... ...+..+.+.+++..++++ ..|.+..
T Consensus 281 ~~l~~v~~~~-dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~~~~~~~~----~~~l~~v~~~~d~~~~a~G-~~G~v~~ 352 (398)
T PLN00033 281 RRIQNMGWRA-DGGLWLLT-RGGGLYV-SKGTGLTEEDFDFEEADIKSR----GFGILDVGYRSKKEAWAAG-GSGILLR 352 (398)
T ss_pred cceeeeeEcC-CCCEEEEe-CCceEEE-ecCCCCcccccceeecccCCC----CcceEEEEEcCCCcEEEEE-CCCcEEE
Confidence 4466788877 66666555 4455433 3333431 122211100 2347888888877766555 5666655
Q ss_pred EECCCCeEEEEee---cccccEEEEEECCCCcEEEeee
Q psy17133 80 FDNVSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 80 ~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.. ..|+.-.... .-....+.+.|.++++.+++|.
T Consensus 353 s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~ 389 (398)
T PLN00033 353 ST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGN 389 (398)
T ss_pred eC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEeC
Confidence 54 4454422222 1234678999988777777653
No 500
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=55.92 E-value=57 Score=21.59 Aligned_cols=59 Identities=8% Similarity=-0.018 Sum_probs=38.1
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
.+++.+-+.||.+.+|+-+.......++.. --...+.+.+.-..+++++.+..+..|..
T Consensus 145 ~~~IcVQS~DG~L~~feqe~~~f~~~lp~~-------llPgPl~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 145 RDFICVQSMDGSLSFFEQESFAFSRFLPDF-------LLPGPLCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred ceEEEEEecCceEEEEeCCcEEEEEEcCCC-------CCCcCeEEeecCCEEEEecCceeEEEecH
Confidence 468888899999999998744333333322 12345666666666777777767776653
Done!