Query psy17133
Match_columns 116
No_of_seqs 180 out of 1890
Neff 12.1
Searched_HMMs 29240
Date Fri Aug 16 22:44:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17133.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17133hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.9 1.5E-25 5.2E-30 131.6 16.4 107 3-116 12-118 (304)
2 3ow8_A WD repeat-containing pr 99.9 4.5E-25 1.5E-29 130.5 17.1 107 3-116 205-311 (321)
3 3ow8_A WD repeat-containing pr 99.9 1.6E-24 5.4E-29 128.2 16.4 107 3-116 163-269 (321)
4 1vyh_C Platelet-activating fac 99.9 7.7E-25 2.6E-29 133.1 14.7 107 3-116 107-213 (410)
5 2ymu_A WD-40 repeat protein; u 99.9 1.5E-24 5.1E-29 135.7 16.4 106 2-116 14-119 (577)
6 3frx_A Guanine nucleotide-bind 99.9 4.5E-24 1.5E-28 126.0 16.0 109 2-116 15-128 (319)
7 1got_B GT-beta; complex (GTP-b 99.9 9.4E-24 3.2E-28 125.6 16.9 109 3-116 225-333 (340)
8 4ery_A WD repeat-containing pr 99.9 1.6E-23 5.3E-28 123.1 17.5 108 2-116 21-128 (312)
9 2ynn_A Coatomer subunit beta'; 99.9 9.8E-24 3.3E-28 123.9 16.5 107 3-116 54-162 (304)
10 4gqb_B Methylosome protein 50; 99.9 1.4E-23 5E-28 125.2 16.0 106 4-116 214-321 (344)
11 4g56_B MGC81050 protein; prote 99.9 1.2E-23 4E-28 126.0 15.4 107 3-116 225-333 (357)
12 2xzm_R RACK1; ribosome, transl 99.9 2.5E-23 8.7E-28 123.8 16.6 109 2-116 19-139 (343)
13 2pbi_B Guanine nucleotide-bind 99.9 2.7E-23 9.4E-28 124.3 16.5 109 3-116 239-347 (354)
14 4ery_A WD repeat-containing pr 99.9 6.3E-23 2.1E-27 120.5 17.4 108 2-116 63-170 (312)
15 1vyh_C Platelet-activating fac 99.9 2E-23 7E-28 126.9 15.3 108 2-116 148-255 (410)
16 2ymu_A WD-40 repeat protein; u 99.9 2.5E-23 8.7E-28 130.2 16.1 106 2-116 465-570 (577)
17 2pbi_B Guanine nucleotide-bind 99.9 7.8E-23 2.7E-27 122.3 17.4 107 3-116 153-261 (354)
18 2hes_X YDR267CP; beta-propelle 99.9 5.8E-23 2E-27 121.8 16.7 107 3-116 57-174 (330)
19 3iz6_a 40S ribosomal protein R 99.9 2.3E-23 8E-28 125.5 15.1 114 2-116 247-365 (380)
20 4h5i_A Guanine nucleotide-exch 99.9 2.2E-23 7.4E-28 125.2 14.8 107 3-116 218-333 (365)
21 4gqb_B Methylosome protein 50; 99.9 4.9E-23 1.7E-27 122.9 16.2 105 4-116 82-191 (344)
22 1nr0_A Actin interacting prote 99.9 6E-23 2E-27 130.0 16.6 109 2-116 145-260 (611)
23 1got_B GT-beta; complex (GTP-b 99.9 9.2E-23 3.1E-27 121.3 16.3 106 3-116 142-247 (340)
24 3fm0_A Protein CIAO1; WDR39,SG 99.9 6.4E-23 2.2E-27 122.2 15.5 107 3-116 14-126 (345)
25 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.1E-22 3.9E-27 121.1 15.8 107 3-116 60-171 (345)
26 3dm0_A Maltose-binding peripla 99.9 1.5E-22 5E-27 129.6 17.2 109 2-116 380-493 (694)
27 2aq5_A Coronin-1A; WD40 repeat 99.9 1.9E-22 6.4E-27 122.0 16.3 108 3-116 80-197 (402)
28 1nr0_A Actin interacting prote 99.9 2.5E-22 8.5E-27 127.2 17.4 113 3-116 189-345 (611)
29 2pm7_B Protein transport prote 99.9 1.7E-22 5.7E-27 118.3 15.2 108 2-116 7-122 (297)
30 2hes_X YDR267CP; beta-propelle 99.9 2.6E-22 9E-27 119.0 16.1 107 3-116 106-220 (330)
31 3zwl_B Eukaryotic translation 99.9 8.7E-22 3E-26 117.1 17.5 107 2-116 30-136 (369)
32 3bg1_A Protein SEC13 homolog; 99.9 8.1E-23 2.8E-27 120.6 12.9 108 2-116 11-126 (316)
33 1erj_A Transcriptional repress 99.9 5.1E-22 1.7E-26 120.1 16.3 112 3-116 63-186 (393)
34 3mkq_A Coatomer beta'-subunit; 99.9 4.7E-22 1.6E-26 128.5 16.4 107 3-116 12-118 (814)
35 3k26_A Polycomb protein EED; W 99.9 1.2E-21 3.9E-26 116.6 17.0 107 3-116 68-182 (366)
36 3f3f_A Nucleoporin SEH1; struc 99.9 9.4E-22 3.2E-26 115.9 16.0 108 2-116 9-133 (351)
37 1erj_A Transcriptional repress 99.9 2.8E-21 9.7E-26 116.9 17.5 103 6-116 125-228 (393)
38 3frx_A Guanine nucleotide-bind 99.9 3.9E-21 1.3E-25 113.5 17.0 106 3-116 64-175 (319)
39 4g56_B MGC81050 protein; prote 99.9 1.5E-21 5.2E-26 116.9 15.3 114 2-116 137-291 (357)
40 3mmy_A MRNA export factor; mRN 99.9 4E-21 1.4E-25 114.2 16.7 108 2-116 37-150 (368)
41 2xzm_R RACK1; ribosome, transl 99.9 5.3E-21 1.8E-25 113.8 17.1 107 2-116 74-193 (343)
42 3iz6_a 40S ribosomal protein R 99.9 1.9E-21 6.4E-26 117.2 15.3 108 3-116 204-319 (380)
43 3lrv_A PRE-mRNA-splicing facto 99.9 1.9E-21 6.5E-26 115.7 14.8 109 3-116 124-235 (343)
44 1k8k_C P40, ARP2/3 complex 41 99.9 4E-21 1.4E-25 114.6 15.7 108 2-116 6-117 (372)
45 1sq9_A Antiviral protein SKI8; 99.9 5.4E-21 1.8E-25 115.1 16.1 106 4-116 233-385 (397)
46 4e54_B DNA damage-binding prot 99.9 1.9E-21 6.6E-26 118.8 14.2 108 3-116 118-230 (435)
47 3jrp_A Fusion protein of prote 99.9 2E-21 6.9E-26 116.0 14.0 108 2-116 9-124 (379)
48 2w18_A PALB2, fancn, partner a 99.9 2.7E-21 9.3E-26 114.7 14.2 111 3-116 177-347 (356)
49 3vl1_A 26S proteasome regulato 99.9 1.2E-21 4.1E-26 118.7 13.0 108 2-116 137-268 (420)
50 4aow_A Guanine nucleotide-bind 99.9 1.2E-20 4E-25 111.5 16.8 109 2-116 36-149 (340)
51 1pgu_A Actin interacting prote 99.9 1.7E-21 5.7E-26 122.5 13.8 106 3-116 487-604 (615)
52 3dm0_A Maltose-binding peripla 99.9 1.3E-20 4.4E-25 120.7 17.8 114 2-116 428-582 (694)
53 3dwl_C Actin-related protein 2 99.9 8.4E-23 2.9E-27 122.4 7.2 107 3-116 10-121 (377)
54 1gxr_A ESG1, transducin-like e 99.9 2.3E-20 7.7E-25 110.0 17.5 108 2-116 95-204 (337)
55 4ggc_A P55CDC, cell division c 99.9 1.8E-20 6E-25 109.8 16.8 62 55-116 242-305 (318)
56 3dwl_C Actin-related protein 2 99.9 7.4E-22 2.5E-26 118.3 10.9 108 2-116 53-167 (377)
57 4gga_A P55CDC, cell division c 99.9 1.8E-20 6.1E-25 114.1 16.7 107 3-116 275-385 (420)
58 2j04_B YDR362CP, TAU91; beta p 99.9 3.5E-22 1.2E-26 124.8 9.4 110 2-116 306-418 (524)
59 4aow_A Guanine nucleotide-bind 99.9 3.6E-20 1.2E-24 109.4 17.5 106 2-116 213-327 (340)
60 3vl1_A 26S proteasome regulato 99.9 7.8E-21 2.7E-25 115.2 14.7 102 8-116 101-202 (420)
61 2aq5_A Coronin-1A; WD40 repeat 99.9 1.1E-20 3.8E-25 114.3 15.4 105 3-113 130-238 (402)
62 2pm7_B Protein transport prote 99.9 1.8E-20 6.1E-25 109.7 15.6 108 3-116 98-228 (297)
63 3sfz_A APAF-1, apoptotic pepti 99.9 1.8E-20 6.3E-25 125.6 17.5 108 2-116 613-722 (1249)
64 3ei3_B DNA damage-binding prot 99.9 5E-20 1.7E-24 110.7 17.1 105 3-116 162-272 (383)
65 4e54_B DNA damage-binding prot 99.9 1.2E-20 4.1E-25 115.4 14.1 110 2-116 162-272 (435)
66 1gxr_A ESG1, transducin-like e 99.9 1E-19 3.6E-24 107.1 17.5 106 3-116 140-245 (337)
67 3odt_A Protein DOA1; ubiquitin 99.9 6.4E-20 2.2E-24 107.2 16.2 104 3-116 183-286 (313)
68 1r5m_A SIR4-interacting protei 99.9 5.2E-20 1.8E-24 111.2 16.3 106 3-116 246-351 (425)
69 2j04_A TAU60, YPL007P, hypothe 99.9 1.6E-20 5.4E-25 117.4 14.2 107 3-116 84-201 (588)
70 2oaj_A Protein SNI1; WD40 repe 99.9 2.4E-20 8.1E-25 122.5 15.6 107 2-116 486-651 (902)
71 1sq9_A Antiviral protein SKI8; 99.9 6.1E-20 2.1E-24 110.5 16.1 109 3-116 185-312 (397)
72 3sfz_A APAF-1, apoptotic pepti 99.9 6E-20 2.1E-24 123.1 17.5 108 2-116 655-764 (1249)
73 3zwl_B Eukaryotic translation 99.9 1.8E-19 6.2E-24 107.1 17.8 106 3-116 217-336 (369)
74 3vu4_A KMHSV2; beta-propeller 99.9 4.7E-20 1.6E-24 110.3 15.3 108 2-116 193-326 (355)
75 3mkq_A Coatomer beta'-subunit; 99.9 3.1E-20 1.1E-24 120.1 15.3 107 3-116 54-162 (814)
76 1k8k_C P40, ARP2/3 complex 41 99.9 5.8E-20 2E-24 109.6 15.4 104 3-113 141-262 (372)
77 3f3f_A Nucleoporin SEH1; struc 99.9 4E-20 1.4E-24 109.0 14.6 113 3-116 109-327 (351)
78 1r5m_A SIR4-interacting protei 99.9 4.6E-20 1.6E-24 111.5 15.1 106 3-116 288-415 (425)
79 2oit_A Nucleoporin 214KDA; NH2 99.9 5E-21 1.7E-25 117.3 10.4 106 4-116 92-213 (434)
80 2pm9_A Protein WEB1, protein t 99.9 1.5E-20 5.1E-25 113.6 12.3 107 4-116 214-327 (416)
81 3ei3_B DNA damage-binding prot 99.9 1.6E-19 5.4E-24 108.5 16.4 110 2-116 116-226 (383)
82 4aez_A CDC20, WD repeat-contai 99.9 2E-19 6.8E-24 108.9 16.9 105 3-116 133-238 (401)
83 3jro_A Fusion protein of prote 99.9 3E-20 1E-24 120.1 13.2 108 2-116 7-122 (753)
84 1pgu_A Actin interacting prote 99.9 1.1E-19 3.6E-24 114.4 15.3 107 2-116 16-137 (615)
85 3lrv_A PRE-mRNA-splicing facto 99.8 2.3E-20 7.8E-25 111.1 11.5 105 3-115 169-280 (343)
86 2xyi_A Probable histone-bindin 99.8 2.7E-19 9.3E-24 109.3 16.3 109 2-116 229-343 (430)
87 3bg1_A Protein SEC13 homolog; 99.8 2E-20 6.7E-25 110.4 10.6 108 3-116 149-283 (316)
88 3dw8_B Serine/threonine-protei 99.8 7.5E-20 2.5E-24 111.5 13.4 110 3-113 27-195 (447)
89 1yfq_A Cell cycle arrest prote 99.8 2.3E-19 7.8E-24 106.1 14.9 112 3-116 192-313 (342)
90 3k26_A Polycomb protein EED; W 99.8 1.6E-19 5.4E-24 107.4 14.1 114 2-116 16-137 (366)
91 2oaj_A Protein SNI1; WD40 repe 99.8 2.3E-19 7.9E-24 117.9 16.0 104 3-116 16-119 (902)
92 3vu4_A KMHSV2; beta-propeller 99.8 2.9E-19 1E-23 106.9 15.1 88 23-116 155-261 (355)
93 2xyi_A Probable histone-bindin 99.8 3.5E-19 1.2E-23 108.8 15.7 108 3-116 276-400 (430)
94 1yfq_A Cell cycle arrest prote 99.8 1.6E-19 5.5E-24 106.8 13.8 106 2-116 9-121 (342)
95 3dw8_B Serine/threonine-protei 99.8 1.6E-19 5.4E-24 110.1 13.8 111 3-115 176-305 (447)
96 3i2n_A WD repeat-containing pr 99.8 6.9E-20 2.4E-24 108.7 11.8 108 3-116 208-343 (357)
97 3jrp_A Fusion protein of prote 99.8 6.5E-19 2.2E-23 105.2 15.4 109 2-116 53-181 (379)
98 2vdu_B TRNA (guanine-N(7)-)-me 99.8 8E-19 2.7E-23 107.7 16.1 104 3-114 194-326 (450)
99 3mmy_A MRNA export factor; mRN 99.8 3.5E-19 1.2E-23 105.9 14.1 110 6-116 214-336 (368)
100 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.7E-19 5.8E-24 110.6 12.9 106 3-116 148-261 (450)
101 4a11_B DNA excision repair pro 99.8 1.2E-18 4.1E-23 104.9 16.0 113 3-116 185-355 (408)
102 3gre_A Serine/threonine-protei 99.8 4.3E-19 1.5E-23 108.2 14.3 106 4-116 168-282 (437)
103 3i2n_A WD repeat-containing pr 99.8 1.5E-19 5.1E-24 107.3 11.7 108 3-116 17-138 (357)
104 2pm9_A Protein WEB1, protein t 99.8 4.2E-19 1.4E-23 107.3 13.5 114 3-116 164-284 (416)
105 2j04_B YDR362CP, TAU91; beta p 99.8 8.8E-19 3E-23 109.6 15.2 107 3-116 206-332 (524)
106 4h5i_A Guanine nucleotide-exch 99.8 2.7E-19 9.2E-24 107.5 12.1 75 3-84 268-343 (365)
107 4aez_A CDC20, WD repeat-contai 99.8 2E-18 6.8E-23 104.6 15.7 105 2-114 215-322 (401)
108 3v7d_B Cell division control p 99.8 2.1E-18 7.3E-23 105.8 15.8 104 3-116 120-226 (464)
109 3gre_A Serine/threonine-protei 99.8 1.3E-18 4.5E-23 106.1 14.7 113 3-116 110-235 (437)
110 4gq1_A NUP37; propeller, trans 99.8 1.2E-19 4E-24 109.9 9.3 95 16-116 100-208 (393)
111 4ggc_A P55CDC, cell division c 99.8 8.6E-18 3E-22 98.4 16.3 101 7-116 28-128 (318)
112 3odt_A Protein DOA1; ubiquitin 99.8 2.2E-18 7.4E-23 100.7 13.7 105 2-116 16-123 (313)
113 4a11_B DNA excision repair pro 99.8 9E-18 3.1E-22 101.1 15.9 107 3-116 98-208 (408)
114 2oit_A Nucleoporin 214KDA; NH2 99.8 2.2E-18 7.7E-23 105.7 13.3 103 3-112 148-257 (434)
115 3v7d_B Cell division control p 99.8 7.7E-18 2.6E-22 103.4 15.6 103 3-116 269-371 (464)
116 4gga_A P55CDC, cell division c 99.8 2.5E-17 8.5E-22 100.3 16.8 105 3-116 146-251 (420)
117 3jro_A Fusion protein of prote 99.8 6.9E-18 2.4E-22 109.2 15.0 108 2-116 97-228 (753)
118 4gq1_A NUP37; propeller, trans 99.8 1.9E-18 6.4E-23 104.7 11.6 114 3-116 253-380 (393)
119 2j04_A TAU60, YPL007P, hypothe 99.8 6.7E-18 2.3E-22 105.8 12.2 103 5-114 130-243 (588)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.8 9.1E-17 3.1E-21 98.3 15.9 106 3-116 318-428 (445)
121 1p22_A F-BOX/WD-repeat protein 99.8 1.1E-16 3.7E-21 97.8 15.4 101 3-116 132-232 (435)
122 1p22_A F-BOX/WD-repeat protein 99.8 1.4E-16 4.9E-21 97.3 15.5 102 2-116 254-355 (435)
123 2w18_A PALB2, fancn, partner a 99.8 2.4E-17 8.3E-22 98.0 11.6 104 4-114 111-245 (356)
124 2hqs_A Protein TOLB; TOLB, PAL 99.8 3.3E-16 1.1E-20 95.6 16.1 104 3-115 177-286 (415)
125 2ovr_B FBW7, F-BOX/WD repeat p 99.7 6.7E-16 2.3E-20 94.5 15.9 101 3-116 198-298 (445)
126 3bws_A Protein LP49; two-domai 99.7 6.5E-16 2.2E-20 94.0 15.8 104 3-114 168-272 (433)
127 1l0q_A Surface layer protein; 99.7 2.9E-15 9.8E-20 90.2 16.8 102 4-114 31-135 (391)
128 3bws_A Protein LP49; two-domai 99.7 2.8E-16 9.7E-21 95.6 11.1 108 5-114 123-230 (433)
129 1l0q_A Surface layer protein; 99.7 9.4E-15 3.2E-19 87.9 16.8 102 4-114 115-218 (391)
130 1k32_A Tricorn protease; prote 99.7 4.3E-15 1.5E-19 99.0 15.7 105 3-115 377-491 (1045)
131 2ecf_A Dipeptidyl peptidase IV 99.7 3.7E-15 1.3E-19 96.0 13.2 106 4-115 36-171 (741)
132 2hqs_A Protein TOLB; TOLB, PAL 99.7 2.8E-14 9.5E-19 87.1 15.5 104 3-115 221-330 (415)
133 2ojh_A Uncharacterized protein 99.6 4.9E-15 1.7E-19 85.6 9.5 107 3-116 171-292 (297)
134 1nir_A Nitrite reductase; hemo 99.6 1.8E-13 6.2E-18 86.1 14.6 96 11-115 144-245 (543)
135 3o4h_A Acylamino-acid-releasin 99.6 1.6E-14 5.4E-19 91.2 9.2 100 8-116 153-266 (582)
136 1xfd_A DIP, dipeptidyl aminope 99.6 5E-14 1.7E-18 90.6 11.2 104 6-115 62-192 (723)
137 2ojh_A Uncharacterized protein 99.6 2.9E-13 9.8E-18 78.2 13.3 104 5-115 129-236 (297)
138 3u4y_A Uncharacterized protein 99.6 5.2E-13 1.8E-17 78.8 14.5 101 5-114 41-146 (331)
139 3vgz_A Uncharacterized protein 99.6 7.3E-13 2.5E-17 78.6 15.0 101 7-114 143-249 (353)
140 2ecf_A Dipeptidyl peptidase IV 99.6 5.7E-14 2E-18 90.6 10.9 100 7-115 111-228 (741)
141 3vgz_A Uncharacterized protein 99.5 3.8E-12 1.3E-16 75.5 16.4 101 4-114 230-332 (353)
142 1nir_A Nitrite reductase; hemo 99.5 2.6E-12 8.8E-17 81.0 16.3 99 7-113 181-297 (543)
143 2z3z_A Dipeptidyl aminopeptida 99.5 1.5E-13 5.2E-18 88.3 10.9 110 4-115 120-277 (706)
144 1xfd_A DIP, dipeptidyl aminope 99.5 2E-13 7E-18 87.8 11.4 107 6-114 115-273 (723)
145 1k32_A Tricorn protease; prote 99.5 2.7E-13 9.2E-18 90.6 12.1 101 6-115 339-440 (1045)
146 1z68_A Fibroblast activation p 99.5 8.6E-14 2.9E-18 89.6 9.2 101 6-115 61-188 (719)
147 1ri6_A Putative isomerase YBHE 99.5 8.4E-13 2.9E-17 77.9 12.7 103 3-114 36-147 (343)
148 3scy_A Hypothetical bacterial 99.5 2E-12 6.8E-17 77.3 14.3 106 5-115 211-325 (361)
149 1jmx_B Amine dehydrogenase; ox 99.5 6.9E-13 2.4E-17 78.5 12.0 100 9-114 4-110 (349)
150 1pby_B Quinohemoprotein amine 99.5 1.2E-12 4.1E-17 77.1 12.8 105 6-113 35-152 (337)
151 1ri6_A Putative isomerase YBHE 99.5 1.8E-12 6E-17 76.5 12.4 102 5-114 84-196 (343)
152 2z3z_A Dipeptidyl aminopeptida 99.5 6.6E-13 2.3E-17 85.3 10.7 99 5-114 82-199 (706)
153 3azo_A Aminopeptidase; POP fam 99.5 1.5E-12 5.3E-17 83.1 12.1 104 4-115 129-261 (662)
154 3u4y_A Uncharacterized protein 99.5 4.5E-12 1.5E-16 74.8 13.2 97 10-113 3-101 (331)
155 4a5s_A Dipeptidyl peptidase 4 99.5 2E-12 6.8E-17 83.8 12.5 105 5-114 17-130 (740)
156 3o4h_A Acylamino-acid-releasin 99.5 9.3E-13 3.2E-17 83.2 10.1 99 3-115 193-301 (582)
157 3hfq_A Uncharacterized protein 99.5 2.9E-11 1E-15 71.9 16.0 109 6-115 188-305 (347)
158 3scy_A Hypothetical bacterial 99.5 2.1E-11 7.1E-16 72.9 15.4 102 7-114 157-277 (361)
159 3hfq_A Uncharacterized protein 99.4 3.4E-11 1.2E-15 71.6 15.8 110 4-114 85-205 (347)
160 1pby_B Quinohemoprotein amine 99.4 2.2E-11 7.4E-16 71.7 14.4 105 5-115 135-299 (337)
161 2oiz_A Aromatic amine dehydrog 99.4 1.5E-11 5.2E-16 73.9 13.8 89 10-108 259-360 (361)
162 1z68_A Fibroblast activation p 99.4 6.5E-13 2.2E-17 85.6 7.6 101 8-114 19-128 (719)
163 1jmx_B Amine dehydrogenase; ox 99.4 1.2E-11 4.2E-16 73.1 11.5 106 6-114 44-165 (349)
164 2xdw_A Prolyl endopeptidase; a 99.4 1.6E-11 5.6E-16 79.3 12.4 101 6-114 126-251 (710)
165 2bkl_A Prolyl endopeptidase; m 99.4 5E-12 1.7E-16 81.5 9.3 102 6-114 122-245 (695)
166 2gop_A Trilobed protease; beta 99.4 4E-11 1.4E-15 71.2 12.4 97 6-114 60-188 (347)
167 4a5s_A Dipeptidyl peptidase 4 99.4 9.1E-12 3.1E-16 80.8 10.1 99 8-115 65-190 (740)
168 1jof_A Carboxy-CIS,CIS-muconat 99.4 7.1E-11 2.4E-15 70.9 13.2 107 6-115 84-212 (365)
169 3pe7_A Oligogalacturonate lyas 99.3 8.8E-11 3E-15 70.6 12.0 96 10-112 41-141 (388)
170 1jof_A Carboxy-CIS,CIS-muconat 99.3 4.4E-11 1.5E-15 71.8 10.6 103 5-114 40-163 (365)
171 2dg1_A DRP35, lactonase; beta 99.3 1.1E-09 3.6E-14 64.8 16.1 103 5-114 45-153 (333)
172 1q7f_A NHL, brain tumor CG1071 99.3 1.8E-09 6.2E-14 62.6 15.6 101 5-112 164-267 (286)
173 3fvz_A Peptidyl-glycine alpha- 99.3 3E-10 1E-14 67.4 12.1 104 6-114 197-310 (329)
174 1xip_A Nucleoporin NUP159; bet 99.3 6.3E-10 2.2E-14 67.6 13.3 91 7-115 90-180 (388)
175 3azo_A Aminopeptidase; POP fam 99.2 2.3E-10 7.7E-15 73.3 11.4 103 5-114 188-312 (662)
176 3e5z_A Putative gluconolactona 99.2 2E-09 6.7E-14 62.8 14.2 100 5-115 172-276 (296)
177 1q7f_A NHL, brain tumor CG1071 99.2 5.1E-09 1.8E-13 60.7 15.5 103 5-114 121-225 (286)
178 3pe7_A Oligogalacturonate lyas 99.2 1.8E-09 6.3E-14 64.9 13.9 100 7-114 83-207 (388)
179 1qks_A Cytochrome CD1 nitrite 99.2 2.2E-09 7.4E-14 68.2 14.4 90 18-115 168-263 (567)
180 3e5z_A Putative gluconolactona 99.2 2.6E-09 8.9E-14 62.3 13.7 99 5-112 28-131 (296)
181 1xip_A Nucleoporin NUP159; bet 99.2 1.3E-09 4.3E-14 66.3 12.4 94 4-112 126-230 (388)
182 3fvz_A Peptidyl-glycine alpha- 99.2 4.8E-09 1.7E-13 62.2 14.5 105 4-114 23-162 (329)
183 3no2_A Uncharacterized protein 99.2 4.1E-09 1.4E-13 61.4 13.7 91 17-115 5-96 (276)
184 3g4e_A Regucalcin; six bladed 99.1 7.2E-09 2.4E-13 60.7 13.9 104 6-114 150-260 (297)
185 1yr2_A Prolyl oligopeptidase; 99.1 1.4E-09 4.7E-14 70.8 11.5 101 6-115 164-287 (741)
186 3c5m_A Oligogalacturonate lyas 99.1 3.1E-09 1.1E-13 63.9 11.9 99 6-115 239-370 (396)
187 2oiz_A Aromatic amine dehydrog 99.1 1.5E-09 5.1E-14 65.4 10.4 91 16-114 14-126 (361)
188 2gop_A Trilobed protease; beta 99.1 9.6E-09 3.3E-13 60.9 13.4 95 4-114 14-122 (347)
189 1rwi_B Serine/threonine-protei 99.1 1.4E-08 5E-13 58.2 12.6 103 5-114 150-252 (270)
190 2dg1_A DRP35, lactonase; beta 99.1 1.1E-09 3.8E-14 64.7 7.8 101 4-114 5-105 (333)
191 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 2.2E-08 7.6E-13 58.6 12.9 102 6-114 173-286 (314)
192 3c5m_A Oligogalacturonate lyas 99.0 1.6E-09 5.6E-14 65.1 7.6 81 7-94 38-121 (396)
193 2qe8_A Uncharacterized protein 99.0 2.5E-07 8.7E-12 55.2 16.3 110 4-114 66-213 (343)
194 3no2_A Uncharacterized protein 99.0 7.2E-08 2.5E-12 56.1 13.6 97 8-113 128-230 (276)
195 2mad_H Methylamine dehydrogena 99.0 6.9E-08 2.4E-12 58.5 13.6 93 13-114 29-143 (373)
196 1qks_A Cytochrome CD1 nitrite 99.0 2.3E-07 7.8E-12 59.1 16.4 98 6-111 198-313 (567)
197 3dsm_A Uncharacterized protein 99.0 6.6E-08 2.2E-12 57.5 13.3 99 6-113 132-242 (328)
198 2ghs_A AGR_C_1268P; regucalcin 99.0 3.1E-07 1.1E-11 54.5 15.5 100 6-113 180-289 (326)
199 3sjl_D Methylamine dehydrogena 98.9 2.5E-08 8.5E-13 60.6 10.6 95 11-114 39-155 (386)
200 2xdw_A Prolyl endopeptidase; a 98.9 3.7E-08 1.3E-12 63.9 12.0 102 7-114 173-304 (710)
201 1rwi_B Serine/threonine-protei 98.9 7.9E-08 2.7E-12 55.1 12.2 102 5-113 108-209 (270)
202 3iuj_A Prolyl endopeptidase; h 98.9 2.7E-08 9.1E-13 64.5 10.5 99 6-113 130-251 (693)
203 3dsm_A Uncharacterized protein 98.9 2.3E-07 8E-12 55.1 12.5 106 5-114 84-190 (328)
204 3g4e_A Regucalcin; six bladed 98.8 1.6E-06 5.6E-11 50.7 16.3 97 7-113 15-115 (297)
205 1mda_H Methylamine dehydrogena 98.8 8.3E-08 2.8E-12 58.1 10.0 79 28-114 47-142 (368)
206 3sjl_D Methylamine dehydrogena 98.8 2.2E-07 7.6E-12 56.6 11.6 104 9-113 82-205 (386)
207 2z2n_A Virginiamycin B lyase; 98.8 1.9E-06 6.5E-11 49.9 15.3 102 4-113 14-116 (299)
208 3c75_H MADH, methylamine dehyd 98.8 1.2E-07 4E-12 58.5 10.4 91 16-114 83-195 (426)
209 2ghs_A AGR_C_1268P; regucalcin 98.7 2.5E-06 8.5E-11 50.7 14.5 97 7-113 51-151 (326)
210 2z2n_A Virginiamycin B lyase; 98.7 3.6E-06 1.2E-10 48.7 15.2 101 5-113 57-158 (299)
211 2bkl_A Prolyl endopeptidase; m 98.7 4.8E-07 1.6E-11 58.7 11.4 95 8-109 171-284 (695)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.9E-06 6.7E-11 50.3 12.9 105 5-114 18-135 (314)
213 3hrp_A Uncharacterized protein 98.7 6.8E-06 2.3E-10 50.4 15.4 102 9-113 271-397 (409)
214 3hrp_A Uncharacterized protein 98.6 2.3E-06 7.8E-11 52.5 12.4 98 5-111 131-235 (409)
215 1yr2_A Prolyl oligopeptidase; 98.6 1.2E-06 4E-11 57.3 11.6 101 8-115 212-335 (741)
216 3dr2_A Exported gluconolactona 98.6 6E-06 2.1E-10 48.5 13.2 97 6-112 46-147 (305)
217 2mad_H Methylamine dehydrogena 98.6 6.7E-06 2.3E-10 49.9 13.5 75 9-91 271-357 (373)
218 2iwa_A Glutamine cyclotransfer 98.6 5.1E-06 1.7E-10 48.3 12.3 102 10-114 110-224 (266)
219 3dr2_A Exported gluconolactona 98.6 5.4E-06 1.8E-10 48.7 12.4 104 4-113 85-205 (305)
220 2qc5_A Streptogramin B lactona 98.6 1.3E-05 4.6E-10 46.3 15.2 102 4-113 19-121 (300)
221 2qe8_A Uncharacterized protein 98.6 1.9E-06 6.6E-11 51.5 10.3 101 7-114 197-309 (343)
222 3nol_A Glutamine cyclotransfer 98.5 1.1E-05 3.6E-10 46.8 12.6 98 16-115 135-244 (262)
223 2qc5_A Streptogramin B lactona 98.5 1.9E-05 6.5E-10 45.7 15.2 101 5-113 62-163 (300)
224 1mda_H Methylamine dehydrogena 98.5 4.9E-06 1.7E-10 50.5 11.1 87 10-105 269-366 (368)
225 2ece_A 462AA long hypothetical 98.5 1.7E-05 5.7E-10 49.4 13.3 103 8-115 141-272 (462)
226 3c75_H MADH, methylamine dehyd 98.5 5.9E-06 2E-10 51.1 10.8 74 10-91 324-409 (426)
227 2xe4_A Oligopeptidase B; hydro 98.4 2.6E-06 8.8E-11 56.0 9.4 100 6-114 175-289 (751)
228 1fwx_A Nitrous oxide reductase 98.4 1E-06 3.5E-11 56.3 6.7 102 6-115 278-407 (595)
229 3mbr_X Glutamine cyclotransfer 98.4 4.2E-05 1.4E-09 43.9 12.8 100 12-114 110-222 (243)
230 2iwa_A Glutamine cyclotransfer 98.4 2.9E-05 9.9E-10 45.1 11.7 96 7-112 23-121 (266)
231 3nok_A Glutaminyl cyclase; bet 98.4 3.8E-05 1.3E-09 44.6 11.9 97 16-114 144-253 (268)
232 2ece_A 462AA long hypothetical 98.4 5.5E-05 1.9E-09 47.1 13.2 104 7-115 190-340 (462)
233 1yiq_A Quinohemoprotein alcoho 98.3 8.2E-06 2.8E-10 53.2 9.8 78 27-111 455-533 (689)
234 3qqz_A Putative uncharacterize 98.3 0.0001 3.5E-09 42.6 14.3 104 5-114 27-139 (255)
235 1npe_A Nidogen, entactin; glyc 98.3 0.00011 3.8E-09 42.2 14.8 99 7-111 38-137 (267)
236 1kb0_A Quinohemoprotein alcoho 98.2 2.1E-05 7.2E-10 51.3 9.8 78 27-111 457-535 (677)
237 3nol_A Glutamine cyclotransfer 98.1 0.00016 5.4E-09 41.9 11.2 77 8-93 46-125 (262)
238 1npe_A Nidogen, entactin; glyc 98.1 0.0003 1E-08 40.4 16.2 102 5-113 79-184 (267)
239 3iuj_A Prolyl endopeptidase; h 98.0 0.00022 7.5E-09 46.6 11.8 99 6-114 235-344 (693)
240 3nok_A Glutaminyl cyclase; bet 98.0 0.00032 1.1E-08 40.8 10.8 92 8-112 58-150 (268)
241 3tc9_A Hypothetical hydrolase; 98.0 0.00079 2.7E-08 41.7 13.5 100 5-113 179-287 (430)
242 1fwx_A Nitrous oxide reductase 97.9 0.00056 1.9E-08 44.1 11.4 95 16-116 100-215 (595)
243 2hz6_A Endoplasmic reticulum t 97.9 5.9E-05 2E-09 45.7 6.5 90 11-109 125-217 (369)
244 3v65_B Low-density lipoprotein 97.9 0.0012 4E-08 40.3 13.4 102 5-112 116-218 (386)
245 2hz6_A Endoplasmic reticulum t 97.9 2.4E-05 8.4E-10 47.3 4.9 68 16-91 8-75 (369)
246 3v64_C Agrin; beta propeller, 97.8 0.0013 4.5E-08 39.6 14.7 102 5-112 73-175 (349)
247 1kb0_A Quinohemoprotein alcoho 97.8 0.00068 2.3E-08 44.4 10.9 96 18-114 328-495 (677)
248 2ad6_A Methanol dehydrogenase 97.8 0.00038 1.3E-08 44.7 9.3 80 26-112 443-523 (571)
249 1ijq_A LDL receptor, low-densi 97.7 0.0019 6.5E-08 38.3 14.9 102 5-112 30-136 (316)
250 2xe4_A Oligopeptidase B; hydro 97.7 0.0012 4.2E-08 43.7 11.2 72 8-85 224-305 (751)
251 3hxj_A Pyrrolo-quinoline quino 97.7 0.00091 3.1E-08 39.3 9.8 92 8-112 140-231 (330)
252 2p4o_A Hypothetical protein; p 97.7 0.0022 7.6E-08 37.7 11.6 93 13-114 175-276 (306)
253 1flg_A Protein (quinoprotein e 97.7 0.00054 1.9E-08 44.1 8.8 79 26-111 465-544 (582)
254 3v64_C Agrin; beta propeller, 97.7 0.0026 9.1E-08 38.3 13.9 100 6-112 117-219 (349)
255 3p5b_L Low density lipoprotein 97.7 0.003 1E-07 38.8 14.9 103 4-112 111-218 (400)
256 3hxj_A Pyrrolo-quinoline quino 97.6 0.0017 5.7E-08 38.1 10.2 86 18-112 108-193 (330)
257 1yiq_A Quinohemoprotein alcoho 97.6 0.0047 1.6E-07 40.6 12.7 81 9-90 239-344 (689)
258 3v65_B Low-density lipoprotein 97.6 0.004 1.4E-07 38.0 13.5 101 6-112 160-262 (386)
259 1ijq_A LDL receptor, low-densi 97.5 0.004 1.4E-07 36.9 16.3 101 6-113 78-181 (316)
260 2fp8_A Strictosidine synthase; 97.5 0.004 1.4E-07 36.8 13.7 104 6-113 81-202 (322)
261 3pbp_A Nucleoporin NUP82; beta 97.4 0.0074 2.5E-07 37.7 14.7 105 5-112 66-196 (452)
262 3mbr_X Glutamine cyclotransfer 97.4 0.0051 1.7E-07 35.4 14.4 92 7-110 23-117 (243)
263 3p5b_L Low density lipoprotein 97.4 0.0073 2.5E-07 37.1 15.3 102 6-113 160-263 (400)
264 2p9w_A MAL S 1 allergenic prot 97.4 0.0071 2.4E-07 36.4 13.4 110 5-114 13-155 (334)
265 3sov_A LRP-6, low-density lipo 97.4 0.0067 2.3E-07 36.1 14.8 100 6-112 80-182 (318)
266 1kv9_A Type II quinohemoprotei 97.4 0.0021 7.1E-08 42.1 8.8 76 27-109 438-514 (668)
267 2ism_A Putative oxidoreductase 97.4 0.0075 2.6E-07 36.4 14.1 102 5-113 31-152 (352)
268 3qqz_A Putative uncharacterize 97.4 0.0062 2.1E-07 35.3 14.0 107 4-112 120-240 (255)
269 4hw6_A Hypothetical protein, I 97.3 0.0094 3.2E-07 37.1 10.8 101 5-113 182-290 (433)
270 3m0c_C LDL receptor, low-densi 97.3 0.017 5.9E-07 38.8 16.4 103 5-113 471-575 (791)
271 3m0c_C LDL receptor, low-densi 97.3 0.017 5.9E-07 38.8 14.9 102 5-112 424-530 (791)
272 3a9g_A Putative uncharacterize 97.3 0.011 3.7E-07 35.8 13.2 103 5-113 29-152 (354)
273 1tl2_A L10, protein (tachylect 97.2 0.0077 2.6E-07 34.3 8.8 99 6-113 42-152 (236)
274 2fp8_A Strictosidine synthase; 97.2 0.012 3.9E-07 34.8 13.7 105 6-113 20-144 (322)
275 1k3i_A Galactose oxidase precu 97.2 0.015 5.3E-07 37.9 11.2 101 9-114 190-305 (656)
276 3sov_A LRP-6, low-density lipo 97.2 0.012 4.3E-07 35.0 12.4 99 7-111 37-137 (318)
277 2p9w_A MAL S 1 allergenic prot 97.2 0.014 4.8E-07 35.2 12.6 105 7-113 65-202 (334)
278 3kya_A Putative phosphatase; s 97.1 0.02 6.9E-07 36.4 12.4 99 6-112 187-326 (496)
279 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.0099 3.4E-07 35.8 9.3 69 18-93 278-346 (376)
280 2p4o_A Hypothetical protein; p 97.1 0.014 4.7E-07 34.3 15.5 76 5-89 32-109 (306)
281 1w6s_A Methanol dehydrogenase 97.1 0.011 3.6E-07 38.5 9.6 79 26-111 452-531 (599)
282 1n7d_A LDL receptor, low-densi 97.1 0.0016 5.4E-08 42.9 5.7 100 7-112 455-556 (699)
283 1cru_A Protein (soluble quinop 97.0 0.024 8.1E-07 35.6 14.9 109 5-114 27-162 (454)
284 3s94_A LRP-6, low-density lipo 97.0 0.032 1.1E-06 36.4 13.8 102 4-111 39-142 (619)
285 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.021 7.3E-07 34.3 12.0 74 18-92 54-130 (376)
286 1n7d_A LDL receptor, low-densi 97.0 0.0015 5.2E-08 43.0 5.2 100 5-111 406-511 (699)
287 4a0p_A LRP6, LRP-6, low-densit 97.0 0.035 1.2E-06 36.3 14.7 101 5-111 37-138 (628)
288 1k3i_A Galactose oxidase precu 96.9 0.028 9.7E-07 36.7 10.6 97 16-115 410-530 (656)
289 3das_A Putative oxidoreductase 96.9 0.027 9.1E-07 34.2 14.6 109 5-114 32-158 (347)
290 2g8s_A Glucose/sorbosone dehyd 96.9 0.028 9.5E-07 34.0 11.1 107 5-113 18-147 (353)
291 1kv9_A Type II quinohemoprotei 96.8 0.046 1.6E-06 35.9 12.4 82 9-91 234-340 (668)
292 3tc9_A Hypothetical hydrolase; 96.8 0.037 1.3E-06 34.4 10.8 73 6-83 227-300 (430)
293 4hw6_A Hypothetical protein, I 96.6 0.053 1.8E-06 33.8 12.7 74 6-83 229-303 (433)
294 3amr_A 3-phytase; beta-propell 96.6 0.051 1.7E-06 33.1 13.8 103 5-114 128-250 (355)
295 3sbq_A Nitrous-oxide reductase 96.6 0.034 1.2E-06 36.2 8.6 102 5-114 323-453 (638)
296 3s94_A LRP-6, low-density lipo 96.6 0.077 2.6E-06 34.7 14.9 102 5-112 349-452 (619)
297 3sre_A PON1, serum paraoxonase 96.5 0.056 1.9E-06 32.9 13.9 98 6-114 166-285 (355)
298 2ad6_A Methanol dehydrogenase 96.5 0.056 1.9E-06 34.9 9.4 27 19-45 318-344 (571)
299 4a2l_A BT_4663, two-component 96.1 0.17 5.7E-06 33.9 15.5 103 5-112 406-514 (795)
300 2wg3_C Hedgehog-interacting pr 95.9 0.17 5.8E-06 32.0 13.9 109 5-114 14-157 (463)
301 4a0p_A LRP6, LRP-6, low-densit 95.8 0.21 7.3E-06 32.7 15.3 107 5-112 340-449 (628)
302 1w6s_A Methanol dehydrogenase 95.7 0.22 7.6E-06 32.5 13.0 82 10-92 246-350 (599)
303 3zwu_A Alkaline phosphatase PH 95.6 0.21 7.1E-06 32.7 9.1 58 56-113 478-548 (592)
304 4a2l_A BT_4663, two-component 95.4 0.35 1.2E-05 32.4 15.5 105 5-112 357-468 (795)
305 3kya_A Putative phosphatase; s 95.3 0.3 1E-05 31.2 12.0 103 6-112 140-263 (496)
306 2xzh_A Clathrin heavy chain 1; 94.9 0.34 1.2E-05 29.6 15.3 94 10-114 72-170 (365)
307 3v9f_A Two-component system se 94.6 0.61 2.1E-05 31.2 13.1 100 5-112 407-511 (781)
308 4fhn_B Nucleoporin NUP120; pro 94.2 1 3.4E-05 31.9 10.3 38 55-92 239-276 (1139)
309 2g8s_A Glucose/sorbosone dehyd 94.1 0.53 1.8E-05 28.4 10.6 57 56-112 132-214 (353)
310 4a9v_A PHOX; hydrolase, beta-p 94.0 0.77 2.6E-05 30.1 9.8 60 54-113 476-548 (592)
311 1bpo_A Protein (clathrin); cla 94.0 0.69 2.4E-05 29.5 13.5 94 10-114 71-169 (494)
312 3sre_A PON1, serum paraoxonase 94.0 0.57 2E-05 28.6 11.5 100 6-113 113-238 (355)
313 4gq2_M Nucleoporin NUP120; bet 93.4 1.3 4.5E-05 30.7 14.0 37 55-91 237-273 (950)
314 3pbp_A Nucleoporin NUP82; beta 93.3 0.95 3.3E-05 28.6 9.6 76 4-80 124-208 (452)
315 3amr_A 3-phytase; beta-propell 93.0 0.93 3.2E-05 27.8 12.4 109 5-114 68-198 (355)
316 2xbg_A YCF48-like protein; pho 92.9 0.87 3E-05 27.1 14.4 101 5-113 163-267 (327)
317 3a9g_A Putative uncharacterize 92.6 1 3.5E-05 27.3 11.2 101 5-112 73-214 (354)
318 3ii7_A Kelch-like protein 7; p 92.0 1.1 3.7E-05 26.2 8.6 68 16-89 55-132 (306)
319 4gq2_M Nucleoporin NUP120; bet 92.0 2.2 7.5E-05 29.7 11.2 37 7-44 238-274 (950)
320 1flg_A Protein (quinoprotein e 91.9 1.7 5.9E-05 28.3 11.8 66 27-92 291-363 (582)
321 1xi4_A Clathrin heavy chain; a 91.3 1.6 5.4E-05 32.2 7.7 92 12-114 73-169 (1630)
322 3f7f_A Nucleoporin NUP120; nuc 91.2 0.65 2.2E-05 31.2 5.5 30 63-92 229-258 (729)
323 3zwu_A Alkaline phosphatase PH 91.1 2.2 7.6E-05 28.1 9.2 60 6-71 477-548 (592)
324 2xbg_A YCF48-like protein; pho 90.5 1.7 5.9E-05 25.8 14.5 98 5-112 122-221 (327)
325 2vpj_A Kelch-like protein 12; 90.3 1.6 5.6E-05 25.3 9.1 68 16-89 159-236 (301)
326 4a9v_A PHOX; hydrolase, beta-p 90.3 2.7 9.2E-05 27.7 9.5 61 5-71 476-548 (592)
327 2xzh_A Clathrin heavy chain 1; 90.0 2.2 7.6E-05 26.2 11.3 72 6-84 261-332 (365)
328 3ei3_A DNA damage-binding prot 89.8 4.2 0.00014 29.1 9.0 64 17-88 844-917 (1158)
329 3v9f_A Two-component system se 89.7 3.3 0.00011 27.8 15.1 103 5-112 450-555 (781)
330 2ism_A Putative oxidoreductase 89.6 2.3 7.7E-05 25.7 10.2 50 54-106 31-85 (352)
331 3s25_A Hypothetical 7-bladed b 89.5 2.2 7.4E-05 25.4 9.4 87 10-112 109-200 (302)
332 3ii7_A Kelch-like protein 7; p 89.4 2 7E-05 25.0 7.8 68 16-89 101-183 (306)
333 1cru_A Protein (soluble quinop 89.3 2.8 9.6E-05 26.4 11.7 53 54-106 27-87 (454)
334 4fhn_B Nucleoporin NUP120; pro 88.4 1 3.5E-05 31.8 5.1 36 8-44 241-276 (1139)
335 3das_A Putative oxidoreductase 88.3 2.9 0.0001 25.5 10.5 53 54-106 32-90 (347)
336 2xn4_A Kelch-like protein 2; s 88.2 2.5 8.6E-05 24.5 8.8 68 16-89 155-234 (302)
337 1zgk_A Kelch-like ECH-associat 88.1 2.6 8.9E-05 24.6 7.9 67 16-88 168-244 (308)
338 4asc_A Kelch repeat and BTB do 88.1 2.6 9.1E-05 24.7 8.9 68 16-89 148-226 (315)
339 2vpj_A Kelch-like protein 12; 87.7 2.7 9.3E-05 24.3 9.7 68 16-89 62-142 (301)
340 4asc_A Kelch repeat and BTB do 86.5 3.4 0.00012 24.2 7.4 56 27-88 117-178 (315)
341 3q6k_A 43.2 kDa salivary prote 86.0 4.5 0.00015 25.1 12.1 85 27-111 123-239 (381)
342 3f7f_A Nucleoporin NUP120; nuc 85.3 3.3 0.00011 28.1 5.8 29 17-45 231-259 (729)
343 1bpo_A Protein (clathrin); cla 84.9 5.9 0.0002 25.5 12.1 72 6-84 260-331 (494)
344 2be1_A Serine/threonine-protei 84.8 2.4 8.1E-05 25.8 4.8 67 24-92 64-138 (339)
345 2woz_A Kelch repeat and BTB do 84.8 4.3 0.00015 23.8 7.9 68 16-89 109-189 (318)
346 2woz_A Kelch repeat and BTB do 83.7 4.8 0.00016 23.6 7.8 67 16-88 158-235 (318)
347 2be1_A Serine/threonine-protei 83.5 5.7 0.00019 24.2 8.8 69 18-91 11-83 (339)
348 2xn4_A Kelch-like protein 2; s 83.1 5 0.00017 23.3 8.6 68 16-89 61-138 (302)
349 1zgk_A Kelch-like ECH-associat 81.5 6 0.0002 23.1 7.2 67 16-88 121-197 (308)
350 1tl2_A L10, protein (tachylect 80.5 6.4 0.00022 22.7 11.7 96 8-112 91-198 (236)
351 3s25_A Hypothetical 7-bladed b 74.4 11 0.00038 22.3 9.9 84 11-111 59-160 (302)
352 3ei3_A DNA damage-binding prot 63.5 40 0.0014 24.5 14.4 67 18-90 524-597 (1158)
353 1xi4_A Clathrin heavy chain; a 63.3 47 0.0016 25.3 7.8 71 7-84 261-331 (1630)
354 2zwa_A Leucine carboxyl methyl 60.7 35 0.0012 22.9 8.6 69 16-89 451-527 (695)
355 1ukf_A Avirulence protein AVRP 51.9 16 0.00054 20.3 2.7 34 5-38 119-152 (188)
356 3sbq_A Nitrous-oxide reductase 49.7 57 0.002 22.0 10.7 97 19-115 72-196 (638)
357 3ott_A Two-component system se 47.8 61 0.0021 21.8 13.5 95 7-111 193-294 (758)
358 3s9j_A Member of DUF4221 famil 43.9 56 0.0019 20.3 11.3 67 25-92 48-117 (369)
359 2zwa_A Leucine carboxyl methyl 41.8 79 0.0027 21.4 11.6 70 16-86 500-579 (695)
360 2uvk_A YJHT; unknown function, 39.9 58 0.002 19.3 11.1 15 75-89 168-182 (357)
361 1q47_A Semaphorin 3A; beta pro 37.6 83 0.0029 20.4 8.4 57 19-79 423-487 (495)
362 2cn3_A Xyloglucanase, beta-1,4 37.6 96 0.0033 21.1 7.8 59 5-64 23-82 (737)
363 4gz8_A Semaphorin-3A; multi-do 35.8 1E+02 0.0035 21.0 8.6 27 53-79 469-495 (667)
364 3al9_A Plexin-A2; beta-propell 35.7 94 0.0032 20.5 6.0 58 18-79 414-476 (539)
365 4gx7_A Cytolysin and hemolysin 35.4 53 0.0018 17.5 5.9 37 7-43 95-135 (152)
366 1zso_A Hypothetical protein; s 31.0 68 0.0023 17.4 5.8 32 55-86 111-142 (164)
367 3ott_A Two-component system se 30.8 1.2E+02 0.0043 20.4 15.8 102 6-112 147-248 (758)
368 4hvt_A Ritya.17583.B, post-pro 27.5 38 0.0013 23.0 2.2 33 56-88 131-169 (711)
369 1sqj_A OXG-RCBH, oligoxylogluc 25.7 1.7E+02 0.0057 20.3 8.1 67 4-71 14-82 (789)
370 3nvq_A Semaphorin-7A; beta-pro 21.0 2E+02 0.0068 19.4 8.5 58 18-79 381-444 (590)
371 2ldu_A Heat shock factor prote 20.3 84 0.0029 16.1 2.2 13 100-112 36-48 (125)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=1.5e-25 Score=131.56 Aligned_cols=107 Identities=26% Similarity=0.321 Sum_probs=101.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|+| +++++++++.|+.|++||+.+++.+..+..+ ...+.+++|+|+++++++++.|+.|++||+
T Consensus 12 h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 12 RSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVT------ETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp ECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECC------SSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeecc------CCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 678999999999 8899999999999999999999989999888 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D 118 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD 118 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC
Confidence 9999999999999999999999999999999976
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=4.5e-25 Score=130.53 Aligned_cols=107 Identities=19% Similarity=0.239 Sum_probs=101.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+.+| ...|.+++|+|+++.+++++.|+.|++||+
T Consensus 205 h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h------~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 205 HAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGH------ASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp CSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCC------CCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 677899999999 8899999999999999999999888899888 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+..|...|.+++|+|++++|++++.|
T Consensus 278 ~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 278 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 9999999999999999999999999999999876
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=1.6e-24 Score=128.21 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=100.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
+...+.+++|+| ++++|++++.++.|++||+.+++.+..+.+| ...+.+++|+|+++++++++.|+.|++||+
T Consensus 163 ~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 163 RGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGH------AMPIRSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp SSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC------SSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred CCceEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccc------CCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 456789999999 8899999999999999999999999999888 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++....+.+|...|.+++|+|++++|++++.|
T Consensus 236 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D 269 (321)
T 3ow8_A 236 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 269 (321)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 9999999999999999999999999999999876
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.93 E-value=7.7e-25 Score=133.08 Aligned_cols=107 Identities=20% Similarity=0.252 Sum_probs=101.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|+++.|+| ++.++++++.|+.|++||..+++....+.+| ...|.+++|+|+++++++++.|+.|++||+
T Consensus 107 h~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h------~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 107 HRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGH------TDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp CSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCC------SSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred cCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecc------CCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 778999999999 7899999999999999999999999999988 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 9999999999999999999999999999999876
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=1.5e-24 Score=135.74 Aligned_cols=106 Identities=18% Similarity=0.371 Sum_probs=98.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|++++|+| ++++|++++.|+.|++||. +++.+..+.+| ...|.+++|+|+++++++++.|+.|++||
T Consensus 14 GH~~~V~~~a~sp-dg~~las~~~d~~v~iWd~-~~~~~~~l~gh------~~~V~~l~fspdg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 14 AHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGH------SSSVWGVAFSPDGQTIASASDDKTVKLWN 85 (577)
T ss_dssp CCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECC------SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCEEEEEEC-CCCEEEEEeCC------CCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 3889999999999 8899999999999999995 68888999998 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
. +++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 86 ~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 119 (577)
T 2ymu_A 86 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 119 (577)
T ss_dssp T-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred C-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCC
Confidence 5 578888899999999999999999999998865
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=4.5e-24 Score=126.05 Aligned_cols=109 Identities=20% Similarity=0.295 Sum_probs=98.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-----CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-----GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
.|.+.|.+++|+|+++++|++++.|+.+++|++.. +.++..+.+| ...|.+++|+|+++++++++.|+.
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h------~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGH------SHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECC------SSCEEEEEECTTSSEEEEEETTSE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCC------cccEEEEEECCCCCEEEEEeCCCE
Confidence 48899999999995568999999999999999863 2346677888 678999999999999999999999
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++||+++++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 128 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD 128 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC
Confidence 9999999999999999999999999999999999999876
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.93 E-value=9.4e-24 Score=125.57 Aligned_cols=109 Identities=20% Similarity=0.356 Sum_probs=98.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|+| +++++++++.|+.|++||+.+++.+..+..... ...+.+++|+|+++++++++.|+.|++||+
T Consensus 225 h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~----~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 225 HESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNI----ICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTC----CSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc----ccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 678899999999 889999999999999999998887777654321 346999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 300 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred ccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCC
Confidence 9999999999999999999999999999999986
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=1.6e-23 Score=123.07 Aligned_cols=108 Identities=21% Similarity=0.313 Sum_probs=101.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++|+| +++++++++.|+.+++|+..+++....+.+| ...+.+++|+|+++++++++.|+.|++||
T Consensus 21 gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 21 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGH------KLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccC------CCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 3778999999999 8899999999999999999999888888888 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.+..+..|...+.+++|+|++++|++++.|
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 128 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 128 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999875
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.93 E-value=9.8e-24 Score=123.86 Aligned_cols=107 Identities=20% Similarity=0.338 Sum_probs=97.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.++.|+| +++++++++.|+.|++||+.+++.+..+.+| ...|.+++|+|+++++++++.|+.|++||+
T Consensus 54 ~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 54 TETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH------PDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp CSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred cCCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCC------CCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 567899999999 7899999999999999999999999999998 678999999999999999999999999999
Q ss_pred CCC-eEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 83 VSG-KLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
+++ .....+.+|...|.+++|+| ++..|++++.|
T Consensus 127 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 877 55567788999999999999 67899999876
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.4e-23 Score=125.21 Aligned_cols=106 Identities=19% Similarity=0.243 Sum_probs=91.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEEC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFDN 82 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~ 82 (116)
...+.+++|+|++++++++++.|+.|++||+.+++.+..+.+| ...|.+++|+|++ +++++++.|+.|++||+
T Consensus 214 ~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h------~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 214 GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH------SQCVTGLVFSPHSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC------SSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred eccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC------CCCEEEEEEccCCCeEEEEEeCCCeEEEEEC
Confidence 3467899999977788999999999999999999999999998 6789999999997 58999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
.+++... +.+|...|++++|+|+++ +|+++|.|
T Consensus 288 ~~~~~~~-~~~H~~~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 288 SLSELFR-SQAHRDFVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp TCCEEEE-ECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred CCCcEEE-EcCCCCCEEEEEEeCCCCeEEEEEcCC
Confidence 9887654 567999999999999986 56788876
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=1.2e-23 Score=125.99 Aligned_cols=107 Identities=13% Similarity=0.210 Sum_probs=95.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~ 81 (116)
+...+.+++|+|+++.++++++.++.|++||+.+++.+..+.++ ...|.+++|+|++ +++++++.|+.|++||
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~------~~~v~~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH------SQNITGLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC------SSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc------ceeEEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 45678999999966778999999999999999999999999888 6789999999986 6899999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
+++++.++.+ +|...|++++|+| ++++|++++.|
T Consensus 299 ~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 299 ADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp TTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETT
T ss_pred CCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCC
Confidence 9999887765 6889999999998 79999999976
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.92 E-value=2.5e-23 Score=123.80 Aligned_cols=109 Identities=18% Similarity=0.220 Sum_probs=97.2
Q ss_pred CCCCCceEEEE-----ccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCCCCEEE
Q psy17133 2 FYNGTPTSIDF-----VRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI 69 (116)
Q Consensus 2 ~~~~~v~~~~~-----~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (116)
.|.+.|+++.| ++.++++|++++.|+.|++||+... .+...+.+| ...|.+++|+|++.+++
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h------~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGH------NHFVSDLALSQENCFAI 92 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCC------SSCEEEEEECSSTTEEE
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccC------CCceEEEEECCCCCEEE
Confidence 37889999999 6546789999999999999998743 345567777 67899999999999999
Q ss_pred EEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 70 TAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 70 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE 139 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC
Confidence 99999999999999999999999999999999999999999999875
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=2.7e-23 Score=124.26 Aligned_cols=109 Identities=21% Similarity=0.346 Sum_probs=97.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.+++|+| +++.+++++.|+.+++||+..++.+..+..+.. ...+.+++|+|++.++++++.|+.|++||+
T Consensus 239 h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~----~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 239 HESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESI----IFGASSVDFSLSGRLLFAGYNDYTINVWDV 313 (354)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTC----CSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc----ccceeEEEEeCCCCEEEEEECCCcEEEEEC
Confidence 678899999999 789999999999999999998877766654421 346889999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 314 ~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 314 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp TTCSEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCceEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 9999999999999999999999999999999986
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.92 E-value=6.3e-23 Score=120.50 Aligned_cols=108 Identities=20% Similarity=0.341 Sum_probs=100.9
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|.+++|+| +++++++++.++.+++||+.+++.+..+.+| ...+.++.|+|++.++++++.|+.|++||
T Consensus 63 ~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 63 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGH------SNYVFCCNFNPQSNLIVSGSFDESVRIWD 135 (312)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred cCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCC------CCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 3678899999999 8899999999999999999999999999888 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.+..+..|...+.+++|+|++++|++++.|
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 136 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 99999999998899999999999999999999875
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.92 E-value=2e-23 Score=126.86 Aligned_cols=108 Identities=15% Similarity=0.217 Sum_probs=101.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++|+| +++++++++.|+.|++||+.+++.+..+.+| ...|.+++|+|++..+++++.|+.|++||
T Consensus 148 ~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h------~~~V~~v~~~p~~~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 148 GHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGH------DHNVSSVSIMPNGDHIVSASRDKTIKMWE 220 (410)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCC------SSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCC------CCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3778999999999 7899999999999999999988888888888 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.+..+.+|...+..+.|+|++++|++++.|
T Consensus 221 ~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 99999999999999999999999999999999876
No 16
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=2.5e-23 Score=130.22 Aligned_cols=106 Identities=18% Similarity=0.367 Sum_probs=97.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|.+++|+| ++++|++++.|+.|++|+. +++.+..+.+| ...|++++|+|+++++++++.|+.|++||
T Consensus 465 ~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~-~~~~~~~~~~h------~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 465 GHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGH------SSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp CCSSCEEEEEECT-TSCEEEEEETTSEEEEEET-TSCEEEEEECC------SSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCC------CCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 3678899999999 8899999999999999996 58888899988 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
. +++.+..+.+|...|.+++|+||+++|++++.|
T Consensus 537 ~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 537 R-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp T-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred C-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 5 688889999999999999999999999999876
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=7.8e-23 Score=122.31 Aligned_cols=107 Identities=21% Similarity=0.327 Sum_probs=99.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~~ 80 (116)
|.+.|.++.|+| ++..+++++.|+.|++||+.+++.+..+.+| ...+.+++++| ++..+++++.|+.|++|
T Consensus 153 h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 153 HTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGH------GADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp CSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred cCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC------CCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 677899999999 7789999999999999999999999999988 67899999987 46899999999999999
Q ss_pred ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+++++.+..+..|...|.+++|+|++++|++++.|
T Consensus 226 d~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 261 (354)
T 2pbi_B 226 DMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDD 261 (354)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC
Confidence 999999999999999999999999999999999876
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.8e-23 Score=121.79 Aligned_cols=107 Identities=11% Similarity=0.149 Sum_probs=90.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-------CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-------GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR 75 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 75 (116)
|.+.|.+++|+| ++++|++++.|+.|++|+... .+.+..+.+| ...|.+++|+|+++++++++.|+
T Consensus 57 h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~sp~g~~las~s~D~ 129 (330)
T 2hes_X 57 HKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH------ENEVKGVAWSNDGYYLATCSRDK 129 (330)
T ss_dssp CCSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----------CEEEEEECTTSCEEEEEETTS
T ss_pred ccCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC------CCcEEEEEECCCCCEEEEEeCCC
Confidence 778899999999 789999999999999999853 3455667777 67899999999999999999999
Q ss_pred eEEEEECCC----CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 76 HIRFFDNVS----GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 76 ~i~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.|++||+.. .+.+..+..|...|.+++|+|++++|++++.|
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 174 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD 174 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 999999943 25667788899999999999999999999876
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.92 E-value=2.3e-23 Score=125.47 Aligned_cols=114 Identities=17% Similarity=0.274 Sum_probs=98.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC-cCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.|.+.|.+++|+| +++++++++.|+.+++||+.+++.+..+..+... ..+...+.+++|+|+++++++++.|+.|++|
T Consensus 247 ~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw 325 (380)
T 3iz6_a 247 GHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW 325 (380)
T ss_dssp CCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred CcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence 3778999999999 8899999999999999999999888877654221 0112348899999999999999999999999
Q ss_pred ECCCCeEEEEe----ecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGKLVHSM----VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+.+++.+..+ .+|...|.+++|+|++++|++++.|
T Consensus 326 d~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 326 DTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp ETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred ECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 99988888776 5688899999999999999999986
No 20
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.92 E-value=2.2e-23 Score=125.21 Aligned_cols=107 Identities=18% Similarity=0.240 Sum_probs=91.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCC----eEEEEECCCCce----eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNS----ACVLFDLETGKP----VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~----~v~i~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 74 (116)
|...|.+++|+| ++..+++++.++ .+.+|+...... ...+.++ ...|.+++|+|+++++++++.|
T Consensus 218 ~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 218 KNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR------FKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp TTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS------CSCEEEEEECTTSCEEEEEETT
T ss_pred CCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCC------CCCeEeEEECCCCCceEEEcCC
Confidence 556789999999 789998888665 578888875543 3345566 5689999999999999999999
Q ss_pred CeEEEEECCCCeEEEEe-ecccccEEEEEECCCCcEEEeeecC
Q psy17133 75 RHIRFFDNVSGKLVHSM-VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.|++||+++++.+..+ .+|...|++++|+|||++|+++|.|
T Consensus 291 ~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 291 NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT
T ss_pred CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC
Confidence 99999999999998875 6899999999999999999999987
No 21
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.92 E-value=4.9e-23 Score=122.92 Aligned_cols=105 Identities=19% Similarity=0.253 Sum_probs=92.6
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE----ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI----DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
...|.+++|+| + ..+++++.|+.|++||+.+++.+..+ .+| ...|.+++|+|+++++++++.|+.|++
T Consensus 82 ~~~v~~~~~s~-d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H------~~~V~~v~~spdg~~l~sgs~d~~i~i 153 (344)
T 4gqb_B 82 EAGVADLTWVG-E-RGILVASDSGAVELWELDENETLIVSKFCKYEH------DDIVSTVSVLSSGTQAVSGSKDICIKV 153 (344)
T ss_dssp SSCEEEEEEET-T-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECC------SSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCEEEEEEeC-C-CeEEEEECCCEEEEEeccCCCceeEeeccccCC------CCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 46799999999 5 57889999999999999988755433 356 678999999999999999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
||+++++.+..+.+|...|.+++|+|++. +|++++.|
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D 191 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED 191 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc
Confidence 99999999999999999999999999885 78888876
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=6e-23 Score=129.97 Aligned_cols=109 Identities=19% Similarity=0.229 Sum_probs=98.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++|+|++...+++++.|+.+++||..+++.+..+.+| ...|.+++|+|+++++++++.|+.|++||
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H------~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH------TKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc------cCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 367889999999943346999999999999999888888888888 67899999999999999999999999999
Q ss_pred CCCCeEEEEee-------cccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMV-------AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+++.+..+. +|...|.+++|+|++++|++++.|
T Consensus 219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D 260 (611)
T 1nr0_A 219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 260 (611)
T ss_dssp TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC
Confidence 99999888874 688999999999999999999876
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.91 E-value=9.2e-23 Score=121.32 Aligned_cols=106 Identities=19% Similarity=0.387 Sum_probs=98.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.++.|++ + ..+++++.|+.|++||+.+++.+..+.+| ...+.+++|+|+++++++++.|+.|++||+
T Consensus 142 h~~~v~~~~~~~-~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 142 HTGYLSCCRFLD-D-NQIVTSSGDTTCALWDIETGQQTTTFTGH------TGDVMSLSLAPDTRLFVSGACDASAKLWDV 213 (340)
T ss_dssp CSSCEEEEEEEE-T-TEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCccEEEEEECC-C-CcEEEEECCCcEEEEECCCCcEEEEEcCC------CCceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 677899999998 4 45888999999999999999999999888 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++....+..|...|.+++|+|++++|++++.|
T Consensus 214 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp TTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence 9999999999999999999999999999999876
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.91 E-value=6.4e-23 Score=122.25 Aligned_cols=107 Identities=12% Similarity=0.125 Sum_probs=92.8
Q ss_pred CCC-CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE---EecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 3 YNG-TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR---IDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~-~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
|.+ .+..++|+| ++++|++++.|+.|++|+..+++.... ..+| ...|.+++|+|+++++++++.|+.++
T Consensus 14 h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h------~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 14 HPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGH------QRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp STTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSC------SSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeecccc------CCcEEEEEECCCCCEEEEEECCCcEE
Confidence 555 899999999 889999999999999999987654322 2455 67899999999999999999999999
Q ss_pred EEECCCC--eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSG--KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+|+..++ +.+..+.+|...|.+++|+|++++|++++.|
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D 126 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC
Confidence 9998766 4567788899999999999999999999876
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.91 E-value=1.1e-22 Score=121.15 Aligned_cols=107 Identities=13% Similarity=0.206 Sum_probs=94.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
|.+.|.+++|+| ++++|++++.|+.+++|+...+. .+..+.+| ...|.+++|+|+++++++++.|+.|++|
T Consensus 60 h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h------~~~v~~v~~sp~~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 60 HQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGH------ENEVKSVAWAPSGNLLATCSRDKSVWVW 132 (345)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cCCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCC------CCCceEEEEeCCCCEEEEEECCCeEEEE
Confidence 678899999999 88999999999999999987653 46677788 6789999999999999999999999999
Q ss_pred ECCCC---eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSG---KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+.++ +.+..+..|...|.+++|+|++++|++++.|
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp EECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred ECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 99765 3455677888999999999999999999876
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=1.5e-22 Score=129.59 Aligned_cols=109 Identities=19% Similarity=0.227 Sum_probs=98.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-----ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-----KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
.|.+.|++++|+|+++++|++++.|+.|++|++.+. .....+.+| ...|.+++|+|+++++++++.|+.
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h------~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH------SHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECC------SSCEEEEEECTTSSEEEEEETTSE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCC------CCcEEEEEECCCCCEEEEEeCCCc
Confidence 388999999999966789999999999999998753 235567788 678999999999999999999999
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++||+.+++....+.+|...|.+++|+|++++|++++.|
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 493 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD 493 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 9999999999999999999999999999999999999876
No 27
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=1.9e-22 Score=122.05 Aligned_cols=108 Identities=18% Similarity=0.324 Sum_probs=98.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDD 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d 74 (116)
|.+.|.+++|+|.++++|++++.|+.|++|++.++ +.+..+.+| ...|.+++|+|++ .++++++.|
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH------TKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC------SSCEEEEEECSSBTTEEEEEETT
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC------CCeEEEEEECcCCCCEEEEEcCC
Confidence 78899999999966789999999999999999877 567788888 6789999999997 699999999
Q ss_pred CeEEEEECCCCeEEEEe--ecccccEEEEEECCCCcEEEeeecC
Q psy17133 75 RHIRFFDNVSGKLVHSM--VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.|++||+.+++.+..+ ..|...+.+++|+|++++|++++.|
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence 99999999999999888 7788999999999999999999875
No 28
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=2.5e-22 Score=127.17 Aligned_cols=113 Identities=16% Similarity=0.220 Sum_probs=95.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEec-CCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS-SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|.+.|.+++|+| ++++|++++.|+.|++||..+++.+..+.. ......|...|.+++|+|+++.+++++.|+.|++||
T Consensus 189 H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 189 HTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 778899999999 889999999999999999998988877741 000112377899999999999999999999999999
Q ss_pred CCCCeEEEE-------------------------------------------eecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHS-------------------------------------------MVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~-------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+++.+.. +.+|...|.+++|+|++++|++++.|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D 345 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAE 345 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 988765543 33677889999999999999999876
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.91 E-value=1.7e-22 Score=118.30 Aligned_cols=108 Identities=16% Similarity=0.196 Sum_probs=94.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--CceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--GKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i 77 (116)
.|.+.|.+++|+| ++++|++++.|+.|++|++.. .+.+..+.+| ...|.+++|+|+ +.++++++.|++|
T Consensus 7 ~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH------~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 7 AHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH------EGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp SCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC------SSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred CCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc------cCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 4788999999999 889999999999999999974 3567888888 678999999863 8899999999999
Q ss_pred EEEECCCCe--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 78 RFFDNVSGK--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
++||+++++ .+..+..|...|.+++|+|+ +++|++++.|
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d 122 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD 122 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC
Confidence 999998774 45566778889999999997 8899999876
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.6e-22 Score=119.00 Aligned_cols=107 Identities=13% Similarity=0.244 Sum_probs=91.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
|.+.|.+++|+| ++++|++++.|+.|++||+... +.+..+.+| ...|.+++|+|++.++++++.|+.|+
T Consensus 106 h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 106 HENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEH------SQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp ---CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC------SSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC------CCceEEEEECCCCCEEEEEcCCCeEE
Confidence 678899999999 7899999999999999999432 345667777 67899999999999999999999999
Q ss_pred EEECCCC--eEEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 79 FFDNVSG--KLVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
+|+..++ +.+..+.+|...|.+++|+|+ +..|++++.|
T Consensus 179 iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 179 IWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred EEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 9998766 567788899999999999998 7789999876
No 31
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.7e-22 Score=117.12 Aligned_cols=107 Identities=17% Similarity=0.210 Sum_probs=98.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++|+| +++++++++.++.|++||+.+++.+..+..| ...+.+++|+|+++++++++.|+.|++||
T Consensus 30 ~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 30 GHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGH------TGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp CCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred EeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhc------CCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 3788999999999 8899999999999999999999999999888 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+++.+..+. +...+.+++|+|+++++++++.+
T Consensus 103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECC
T ss_pred CCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCC
Confidence 99999988887 77889999999999999987653
No 32
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.90 E-value=8.1e-23 Score=120.56 Aligned_cols=108 Identities=17% Similarity=0.257 Sum_probs=92.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i 77 (116)
.|.+.|.+++|+| ++++|++++.|+.|++||+.+++ .+..+.+| ...|.+++|+| ++.++++++.|+.|
T Consensus 11 ~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH------~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 11 SHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGH------EGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp ---CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECC------SSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred cccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCC------CccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 4788999999999 78999999999999999998764 45678888 67899999986 48899999999999
Q ss_pred EEEECCCCe--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 78 RFFDNVSGK--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
++||+++++ ....+.+|...|.+++|+|+ +.+|++++.|
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC
Confidence 999998873 56667789999999999998 7899998875
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.90 E-value=5.1e-22 Score=120.12 Aligned_cols=112 Identities=22% Similarity=0.296 Sum_probs=95.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------CCCCceeEEEEcCCCCEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------SGGGGINRVVCHPTLPLTIT 70 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~ 70 (116)
|.+.|.+++|+| ++++|++++ ++.+++|++.+++.+..+..+.... .+...|.+++|+|+++++++
T Consensus 63 h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 63 HTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp CSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 788999999999 789999877 6789999999998887776542100 01224889999999999999
Q ss_pred EeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 71 AHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 71 ~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 186 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD 186 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC
Confidence 9999999999999999999999999999999999999999999876
No 34
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.90 E-value=4.7e-22 Score=128.49 Aligned_cols=107 Identities=25% Similarity=0.317 Sum_probs=101.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|+| ++.++++++.++.|++||..+++.+..+.++ ...+.+++|+|+++++++++.|+.|++|++
T Consensus 12 h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 12 RSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVT------ETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp ECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECC------SSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred CCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecC------CCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 778999999999 8899999999999999999999999999988 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+..|...+.+++|+|++++|++++.|
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 118 (814)
T 3mkq_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD 118 (814)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC
Confidence 9999999999999999999999999999998865
No 35
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.90 E-value=1.2e-21 Score=116.57 Aligned_cols=107 Identities=19% Similarity=0.205 Sum_probs=98.0
Q ss_pred CCCCceEEEEccCC----CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeE
Q psy17133 3 YNGTPTSIDFVRDE----STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHI 77 (116)
Q Consensus 3 ~~~~v~~~~~~~~~----~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i 77 (116)
|.+.|.+++|+| + +.++++++.++.|++||+.+++.+..+.++ ...|.+++|+| ++..+++++.|+.|
T Consensus 68 ~~~~v~~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~l~s~~~dg~i 140 (366)
T 3k26_A 68 ADENFYTCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGH------GNAINELKFHPRDPNLLLSVSKDHAL 140 (366)
T ss_dssp TTCCEEEEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESC------CSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred CCCcEEEEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCC------CCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 567899999999 5 568999999999999999999999999888 67899999999 89999999999999
Q ss_pred EEEECCCCeEEEEe---ecccccEEEEEECCCCcEEEeeecC
Q psy17133 78 RFFDNVSGKLVHSM---VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++||+++++.+..+ ..|...+.+++|+|++++|++++.|
T Consensus 141 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 141 RLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp EEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence 99999999998887 5788999999999999999999875
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=9.4e-22 Score=115.91 Aligned_cols=108 Identities=9% Similarity=0.097 Sum_probs=95.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCC
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDR 75 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~ 75 (116)
.|.+.|.+++|+| ++++|++++.|+.|++|++.++ +....+.+| ...|.+++|+| ++.++++++.|+
T Consensus 9 gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 9 GHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH------DSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC------SSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccC------CCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 4789999999999 8899999999999999999865 355666777 67899999999 589999999999
Q ss_pred eEEEEECCCC---------eEEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 76 HIRFFDNVSG---------KLVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 76 ~i~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
.|++||+.++ +.+..+..|...+.+++|+|+ +++|++++.|
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 133 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND 133 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC
Confidence 9999999876 567777788999999999999 9999998875
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.89 E-value=2.8e-21 Score=116.86 Aligned_cols=103 Identities=23% Similarity=0.371 Sum_probs=94.1
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 85 (116)
.|.+++|+| +++++++++.|+.|++||+.+++.+..+.+| ...|.+++|+|++..+++++.|+.|++||++++
T Consensus 125 ~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGH------EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccC------CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 488999999 8899999999999999999999888899888 678999999999999999999999999999999
Q ss_pred eEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 86 KLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
+....+. +...+..++|+| ++++|++++.|
T Consensus 198 ~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d 228 (393)
T 1erj_A 198 QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLD 228 (393)
T ss_dssp EEEEEEE-CSSCEEEEEECSTTCCEEEEEETT
T ss_pred eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCC
Confidence 8887776 456799999999 89999999875
No 38
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.89 E-value=3.9e-21 Score=113.53 Aligned_cols=106 Identities=17% Similarity=0.252 Sum_probs=95.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.++.|+| +++++++++.|+.|++||+.+++.+..+.+| ...|.+++|+|++..+++++.|+.|++||+
T Consensus 64 h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 64 HSHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGH------KSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECC------SSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred CcccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccC------CCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 778899999999 8899999999999999999999999999988 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCC------CcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQ------GLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~s~d 116 (116)
+ ++.+..+.+|...+..+.|.|. +..+++++.|
T Consensus 137 ~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d 175 (319)
T 3frx_A 137 K-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGND 175 (319)
T ss_dssp T-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETT
T ss_pred C-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCC
Confidence 7 5667778889999999999985 4478888865
No 39
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.89 E-value=1.5e-21 Score=116.90 Aligned_cols=114 Identities=11% Similarity=0.120 Sum_probs=96.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------- 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------- 50 (116)
.|.+.|.+++|+| ++++|++++.++.|++||+.+++.+..+.+|....
T Consensus 137 ~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~ 215 (357)
T 4g56_B 137 EHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK 215 (357)
T ss_dssp CCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred CCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence 3678899999999 88999999999999999999888877776654321
Q ss_pred --------CCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133 51 --------SGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ 116 (116)
Q Consensus 51 --------~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d 116 (116)
.+...+.+++|+|+ +.++++++.|+.|++||+++++.+..+..|...|.+++|+|++ ++|++++.|
T Consensus 216 ~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 216 PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT
T ss_pred eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC
Confidence 23445788999997 5688899999999999999999888898899999999999987 578898876
No 40
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.89 E-value=4e-21 Score=114.24 Aligned_cols=108 Identities=12% Similarity=0.205 Sum_probs=94.6
Q ss_pred CCCCCceEEEEccCC--CcEEEEeeCCCeEEEEECCC-Ccee-EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDE--STKMVTAFDNSACVLFDLET-GKPV-VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~-~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 77 (116)
.|.+.|.+++|+|++ +++|++++.++.|++|++.+ +..+ ..+.+| ...|.+++|+|+++++++++.|+.|
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~dg~v 110 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH------TGPVLDVCWSDDGSKVFTASCDKTA 110 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc------cCCEEEEEECcCCCEEEEEcCCCcE
Confidence 378899999999943 69999999999999999987 4444 667777 6789999999999999999999999
Q ss_pred EEEECCCCeEEEEeecccccEEEEEE--CCCCcEEEeeecC
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAV--DPQGLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~s~d 116 (116)
++||+.+++.+. +..|...+.+++| +|++++|++++.|
T Consensus 111 ~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 111 KMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp EEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETT
T ss_pred EEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCC
Confidence 999999988776 4458889999999 9999999999865
No 41
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.89 E-value=5.3e-21 Score=113.81 Aligned_cols=107 Identities=19% Similarity=0.218 Sum_probs=93.6
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|...|.+++|+| ++.++++++.|+.|++||+.+++.+..+.+| ...|.+++|+|+++.+++++.|+.|++||
T Consensus 74 ~h~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h------~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 74 GHNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGH------QSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp CCSSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECC------CSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred cCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC------CCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 3678899999999 7899999999999999999999999999988 67899999999999999999999999999
Q ss_pred CCCCeEEEEee---cccccEEEEEECCCC----------cEEEeeecC
Q psy17133 82 NVSGKLVHSMV---AHLDAVTSLAVDPQG----------LYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~s~d 116 (116)
+... ...... .|...+.+++|+|++ .+|++++.|
T Consensus 147 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d 193 (343)
T 2xzm_R 147 ILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD 193 (343)
T ss_dssp SSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT
T ss_pred ccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC
Confidence 9843 333333 577789999999987 789988865
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.89 E-value=1.9e-21 Score=117.21 Aligned_cols=108 Identities=22% Similarity=0.258 Sum_probs=94.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|...|.++.|++.+++++++++.|+.|++||+. .++.+..+.+| ...|.+++|+|++..+++++.|+.|++||
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH------EGDINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC------SSCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred CccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc------CCCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 567889999987678999999999999999997 45677888888 67899999999999999999999999999
Q ss_pred CCCCeEEEEeeccc-------ccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHL-------DAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.+..+..+. ..+.+++|+|++++|++++.|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 278 MRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp TTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred CCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence 99999888776432 247899999999999998765
No 43
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.9e-21 Score=115.69 Aligned_cols=109 Identities=8% Similarity=0.014 Sum_probs=93.5
Q ss_pred CCCCceEEEEccC-CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRD-ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|.+.|.+++|+|. +++++++++.|+.+++||+.+++.......+. ...+.+++|+|++.++++++.|+.|++||
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-----~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS-----DVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS-----SCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC-----CCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 4578999999982 35889999999999999999888766654442 34699999999999999999999999999
Q ss_pred CCCCeEE-EEeec-ccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLV-HSMVA-HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.+ ..+.. |...|.+++|+|++++|++++.|
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~ 235 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ 235 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 9999877 77777 89999999999999999998853
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.89 E-value=4e-21 Score=114.65 Aligned_cols=108 Identities=13% Similarity=0.168 Sum_probs=96.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
+|.+.|.+++|+| +++++++++.++.|++|+..+++ .+..+.+| ...+.+++|+|+++++++++.|+.|++
T Consensus 6 ~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 6 FLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH------NGQVTGVDWAPDSNRIVTCGTDRNAYV 78 (372)
T ss_dssp SCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECC------SSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC------CCcccEEEEeCCCCEEEEEcCCCeEEE
Confidence 4788999999999 88999999999999999998876 77888887 678999999999999999999999999
Q ss_pred EECCCCeEEEEe--ecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSM--VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||+++++..... ..|...+.+++|+|++++|++++.|
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 117 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS 117 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC
Confidence 999988755443 4678899999999999999998865
No 45
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.88 E-value=5.4e-21 Score=115.07 Aligned_cols=106 Identities=13% Similarity=0.171 Sum_probs=98.1
Q ss_pred CCCceEEEEccCCCcEEEEeeCC---CeEEEEECCCCceeEEEec-------------CCcCcCCCCceeEEEEcCCCCE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDN---SACVLFDLETGKPVVRIDS-------------SQFGVSGGGGINRVVCHPTLPL 67 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~---~~v~i~~~~~~~~~~~~~~-------------~~~~~~~~~~i~~~~~~~~~~~ 67 (116)
...|.+++|+| +++++++++.+ +.|++||+.+++.+..+.. + ...+.+++|+|++++
T Consensus 233 ~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 233 SNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH------SSWVMSLSFNDSGET 305 (397)
T ss_dssp CCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB------SSCEEEEEECSSSSE
T ss_pred CCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc------CCcEEEEEECCCCCE
Confidence 78899999999 78999999999 9999999999998888887 6 678999999999999
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEee------cc---------------cccEEEEEECCCC----------cEEEeeecC
Q psy17133 68 TITAHDDRHIRFFDNVSGKLVHSMV------AH---------------LDAVTSLAVDPQG----------LYILSGTYQ 116 (116)
Q Consensus 68 ~~~~~~d~~i~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~----------~~l~~~s~d 116 (116)
+++++.|+.|++||+.+++.+..+. .| ...|.+++|+|++ ++|++++.|
T Consensus 306 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d 385 (397)
T 1sq9_A 306 LCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD 385 (397)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT
T ss_pred EEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCC
Confidence 9999999999999999999999988 77 8899999999998 799999876
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.88 E-value=1.9e-21 Score=118.84 Aligned_cols=108 Identities=13% Similarity=0.127 Sum_probs=88.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE--EecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR--IDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~ 79 (116)
|...|++++|+|.++++|++|+.|+.|++||+.+++.... +.+| .+.|.+++|+| ++.+|++++.|++|++
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH------~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA------GGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSS------SCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCC------CCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 5678999999997778999999999999999987664443 3456 67899999998 5889999999999999
Q ss_pred EECCCCeEEEEeecc--cccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAH--LDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||++++........+ ...+.+++|+|++++|++++.|
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC
Confidence 999866554333322 3357789999999999999865
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2e-21 Score=115.98 Aligned_cols=108 Identities=16% Similarity=0.201 Sum_probs=95.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i 77 (116)
.|.+.|.+++|+| ++++|++++.++.|++|++. +++.+..+.+| ...|.+++|+|+ +.++++++.|+.|
T Consensus 9 ~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 9 AHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH------EGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCC------SSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCC------CCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 3789999999999 78999999999999999997 45566777777 678999999977 8999999999999
Q ss_pred EEEECCCCe--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 78 RFFDNVSGK--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
++||+.+++ .+..+..|...+.+++|+|+ +++|++++.|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 999999887 66667778899999999999 9999998865
No 48
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.88 E-value=2.7e-21 Score=114.67 Aligned_cols=111 Identities=12% Similarity=0.111 Sum_probs=79.1
Q ss_pred CCCCceEEEEcc--CCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc------------------
Q psy17133 3 YNGTPTSIDFVR--DESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH------------------ 62 (116)
Q Consensus 3 ~~~~v~~~~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------------------ 62 (116)
|...+..++|++ .++..|++++.|+.|++||+.+++.+..+.++... ...+..++|+
T Consensus 177 ~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~---v~~v~~vafSpdG~~lvs~s~~~~~w~l 253 (356)
T 2w18_A 177 MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY---QASVCHKAYSEMGLLFIVLSHPCAKESE 253 (356)
T ss_dssp CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC------CCCEEEEEEETTEEEEEEC--------
T ss_pred CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc---eeeeEEEEECCCCCEEEEeccCCCccee
Confidence 344455555554 34578889999999999999999999988754210 0112222222
Q ss_pred ---------------------------CCCC------------EEEEEeCCCeEEEEECCCCeEEEEeecccccEE-EEE
Q psy17133 63 ---------------------------PTLP------------LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVT-SLA 102 (116)
Q Consensus 63 ---------------------------~~~~------------~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~-~~~ 102 (116)
|++. ++++++.|++|++||+.+++.+.++.+|...+. .++
T Consensus 254 aSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~va 333 (356)
T 2w18_A 254 SLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVK 333 (356)
T ss_dssp ----CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEE
T ss_pred eccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 2222 467788899999999999999999988876555 589
Q ss_pred ECCCCcEEEeeecC
Q psy17133 103 VDPQGLYILSGTYQ 116 (116)
Q Consensus 103 ~~~~~~~l~~~s~d 116 (116)
|+|+|++|++|+.|
T Consensus 334 fSPDG~~LaSGS~D 347 (356)
T 2w18_A 334 WSGTDSHLLAGQKD 347 (356)
T ss_dssp ECSSSSEEEEECTT
T ss_pred ECCCCCEEEEEECC
Confidence 99999999999987
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.88 E-value=1.2e-21 Score=118.72 Aligned_cols=108 Identities=13% Similarity=0.235 Sum_probs=94.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++|+| ++++|++++.|+.|++||+.+++.+..+.+| ...|.+++|+|++..+++++.|+.|++||
T Consensus 137 ~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 137 AHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGH------RATVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp SSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECC------SSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCC------CCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 4788999999999 7899999999999999999999999999888 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecc---ccc---------------------EEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAH---LDA---------------------VTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~---~~~---------------------v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.+..+..+ ... +..++|+|++++|++++.|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 268 (420)
T 3vl1_A 210 CGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS 268 (420)
T ss_dssp TTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred CCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence 9999988887642 233 4445568899999998865
No 50
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.88 E-value=1.2e-20 Score=111.48 Aligned_cols=109 Identities=19% Similarity=0.258 Sum_probs=96.4
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
.|.+.|++++|+|+++++|++++.|+.|++||+.+.+ +...+.+| ...|.+++|+|+++++++++.|+.
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h------~~~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH------SHFVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSE
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCC------CCCEEEEEECCCCCEEEEEccccc
Confidence 3889999999999667899999999999999987543 35566777 678999999999999999999999
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++|+............+...+....+++++++|++++.|
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 149 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 149 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC
Confidence 9999999998888887788888999999999999998865
No 51
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=1.7e-21 Score=122.47 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=97.9
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEec-CCcCcCCCCceeEEEEcC----------CCCEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS-SQFGVSGGGGINRVVCHP----------TLPLTITA 71 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~----------~~~~~~~~ 71 (116)
|.+.|.+++|+| ++++|++++.++.+++|++.+++.+..+.+ | ...+.+++|+| ++++++++
T Consensus 487 ~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h------~~~v~~~~~sp~~~~~~~~~~~~~~l~~~ 559 (615)
T 1pgu_A 487 LRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFR------TSKINAISWKPAEKGANEEEIEEDLVATG 559 (615)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCC------SSCEEEEEECCCC------CCSCCEEEEE
T ss_pred ccCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcceeEeecCC------CCceeEEEEcCccccccccccCCCEEEEE
Confidence 678899999999 889999999999999999999988888776 6 67899999999 99999999
Q ss_pred eCCCeEEEEECCCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 72 HDDRHIRFFDNVSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 72 ~~d~~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.|+.|++|+++++ +.+..+.+|...|.+++|+|+++ |++++.|
T Consensus 560 ~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d 604 (615)
T 1pgu_A 560 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGAD 604 (615)
T ss_dssp ETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETT
T ss_pred cCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCC
Confidence 99999999999987 78888888999999999999999 9998876
No 52
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.88 E-value=1.3e-20 Score=120.68 Aligned_cols=114 Identities=18% Similarity=0.222 Sum_probs=92.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------- 50 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------- 50 (116)
.|.+.|.+++|+| ++++|++++.|+.|++||+.+++.+..+.+|...+
T Consensus 428 ~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 428 GHSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK 506 (694)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence 3778899999999 88999999999999999999888887777774321
Q ss_pred --------CCCCceeEEEEcCCC--CEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 51 --------SGGGGINRVVCHPTL--PLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 51 --------~~~~~i~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.|...+.+++|+|++ ..+++++.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 244456677777764 467777777777777777777777888899999999999999999999876
No 53
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.88 E-value=8.4e-23 Score=122.37 Aligned_cols=107 Identities=14% Similarity=0.127 Sum_probs=90.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
+.+.|.+++|+| ++++|++++.++.|++|++.++ +.+..+.+| ...|.+++|+|+++++++++.|+.|++|
T Consensus 10 ~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 10 LPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDH------DKIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp CSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCC------SSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred CCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecC------CceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 467899999999 8899999999999999999887 667777777 6789999999999999999999999999
Q ss_pred ECCCCe---EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 81 DNVSGK---LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 81 ~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+.+++ ....+..|...+.+++|+|++++|++++.|
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence 999877 566677789999999999999999998875
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.88 E-value=2.3e-20 Score=109.97 Aligned_cols=108 Identities=15% Similarity=0.244 Sum_probs=96.6
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
.|...|.++.|+| +++++++++.++.+++||+.+++ ....+..+ ...+.+++|+|+++.+++++.|+.|++
T Consensus 95 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~dg~v~~ 167 (337)
T 1gxr_A 95 NRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS------APACYALAISPDSKVCFSCCSDGNIAV 167 (337)
T ss_dssp CTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECS------SSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccC------CCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 3677899999999 88999999999999999998776 45566666 568999999999999999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||+++++.+..+..|...+.+++|+|++++|++++.|
T Consensus 168 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 9999999999998899999999999999999998865
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.88 E-value=1.8e-20 Score=109.84 Aligned_cols=62 Identities=18% Similarity=0.295 Sum_probs=50.6
Q ss_pred ceeEEEEcCCCCEEEEEe--CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 55 GINRVVCHPTLPLTITAH--DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~--~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+..+.++|++..+++++ .|+.|++||+++++.+..+.+|.+.|++++|+|++++|+++|.|
T Consensus 242 ~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 242 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 344566666666555543 67888888888889999999999999999999999999999987
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.88 E-value=7.4e-22 Score=118.29 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=87.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.|.+.|.+++|+| ++++|++++.|+.+++||+.+++ ....+..+ ...+.+++|+|+++.+++++.|+.|+
T Consensus 53 ~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 53 DHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL------NRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp CCSSCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCC------SSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred cCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc------CCceEEEEECCCCCEEEEEecCCeEE
Confidence 3778999999999 78999999999999999998776 55666666 67899999999999999999999999
Q ss_pred EEECCCCe---EEEEeec-ccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGK---LVHSMVA-HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+||+++++ ....+.. |...+.+++|+|++++|++++.|
T Consensus 126 iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 126 VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp ECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred EEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 99998876 3566666 88999999999999999999875
No 57
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.88 E-value=1.8e-20 Score=114.13 Aligned_cols=107 Identities=15% Similarity=0.270 Sum_probs=94.5
Q ss_pred CCCCceEEEEccCCCcEEEEe--eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe--CCCeEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTA--FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH--DDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~--~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~d~~i~ 78 (116)
|.+.|.++.|+|.+...++++ +.|+.|++||+.+++....+..+ ..+..+.|+|++..+++++ .|+.|+
T Consensus 275 ~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-------~~v~~~~~~~~~~~lv~~sg~~d~~I~ 347 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-------SQVCSILWSPHYKELISGHGFAQNQLV 347 (420)
T ss_dssp CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-------SCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-------cceeeeeecCCCCeEEEEEecCCCEEE
Confidence 667899999999766777654 57999999999999988888776 4688999999998877655 689999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+||+.+++.+..+.+|...|.+++|+|+|++|+|++.|
T Consensus 348 iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D 385 (420)
T 4gga_A 348 IWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 385 (420)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 99999999999999999999999999999999999987
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.5e-22 Score=124.77 Aligned_cols=110 Identities=16% Similarity=0.157 Sum_probs=95.0
Q ss_pred CCCCCceEE--EEccCCC-cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 2 FYNGTPTSI--DFVRDES-TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 2 ~~~~~v~~~--~~~~~~~-~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.|.+.|.++ .|+| ++ ++|++++.|+.+++||+.+++.+..+.++.. ...+.+++|+|++..+++++.|+.|+
T Consensus 306 ~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~----~~~v~~v~fsp~~~~l~s~~~d~tv~ 380 (524)
T 2j04_B 306 VHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR----GSNLVPVVYCPQIYSYIYSDGASSLR 380 (524)
T ss_dssp CSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS----CCSCCCEEEETTTTEEEEECSSSEEE
T ss_pred cccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccccc----cCcccceEeCCCcCeEEEeCCCCcEE
Confidence 377889999 5677 66 8999999999999999988777666666521 12478999999999999999999999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+||++++..+..+.+|...|.+++|+|++++|++|+.|
T Consensus 381 lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 381 AVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp EEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT
T ss_pred EEECcccccceeeecCCCceEEEEeCCCCCeEEEEECC
Confidence 99999998888888899999999999999999999976
No 59
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.88 E-value=3.6e-20 Score=109.38 Aligned_cols=106 Identities=20% Similarity=0.252 Sum_probs=91.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++|+| ++++|++++.|+.+++||+.+.+.+..+..+ ..+..+.++|++.+++ ++.|+.|++||
T Consensus 213 ~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~-~~~d~~i~iwd 283 (340)
T 4aow_A 213 GHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-------DIINALCFSPNRYWLC-AATGPSIKIWD 283 (340)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECS-------SCEEEEEECSSSSEEE-EEETTEEEEEE
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCC-------ceEEeeecCCCCceee-ccCCCEEEEEE
Confidence 3678899999999 8899999999999999999999888888766 4699999999886554 55699999999
Q ss_pred CCCCeEEEEee---------cccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMV---------AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++..+..+. .|...|.+++|+|++++|++++.|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 284 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp TTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 99887766553 467789999999999999999876
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.88 E-value=7.8e-21 Score=115.16 Aligned_cols=102 Identities=13% Similarity=0.171 Sum_probs=92.7
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
....|+| +++++++++.++.+++||+.+++....+..| ...|.+++|+|+++++++++.|+.|++||+.+++.
T Consensus 101 ~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 101 AVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAH------VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN 173 (420)
T ss_dssp EEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSS------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC
T ss_pred EEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccc------cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC
Confidence 3446788 7899999999999999999988877777777 67899999999999999999999999999999999
Q ss_pred EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 88 VHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+..+..|...|.+++|+|++++|++++.|
T Consensus 174 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 174 PRTLIGHRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp CEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred ceEEcCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 88999999999999999999999999875
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.87 E-value=1.1e-20 Score=114.32 Aligned_cols=105 Identities=16% Similarity=0.215 Sum_probs=94.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE--ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI--DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
|.+.|.+++|+|++.+++++++.|+.|++||+.+++.+..+ ..| ...+.+++|+|++..+++++.|+.|++|
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~iw 203 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVH------PDTIYSVDWSRDGALICTSCRDKRVRVI 203 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTC------CSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCC------CCceEEEEECCCCCEEEEEecCCcEEEE
Confidence 77889999999943479999999999999999999888888 666 6789999999999999999999999999
Q ss_pred ECCCCeEEEEe-eccccc-EEEEEECCCCcEEEee
Q psy17133 81 DNVSGKLVHSM-VAHLDA-VTSLAVDPQGLYILSG 113 (116)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~ 113 (116)
|+++++.+..+ ..|... +..++|+|++++|+++
T Consensus 204 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 204 EPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp ETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred eCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 99999998888 567664 8999999999999987
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.87 E-value=1.8e-20 Score=109.72 Aligned_cols=108 Identities=18% Similarity=0.261 Sum_probs=91.4
Q ss_pred CCCCceEEEEccCC-CcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCC-------------CC
Q psy17133 3 YNGTPTSIDFVRDE-STKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPT-------------LP 66 (116)
Q Consensus 3 ~~~~v~~~~~~~~~-~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~ 66 (116)
|...|.+++|+|++ +.++++++.|+.|++||+.++. ....+.+| ...+.+++|+|+ ++
T Consensus 98 h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h------~~~v~~~~~~p~~~~~~~~~~~~~~~~ 171 (297)
T 2pm7_B 98 HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH------AIGVNSASWAPATIEEDGEHNGTKESR 171 (297)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC------SSCEEEEEECCCC------------CC
T ss_pred CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc------cCccceEeecCCcccccccCCCCCCcc
Confidence 67789999999942 7899999999999999998653 23556677 678999999997 46
Q ss_pred EEEEEeCCCeEEEEECCCCe----EEEEeecccccEEEEEECCCC---cEEEeeecC
Q psy17133 67 LTITAHDDRHIRFFDNVSGK----LVHSMVAHLDAVTSLAVDPQG---LYILSGTYQ 116 (116)
Q Consensus 67 ~~~~~~~d~~i~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~l~~~s~d 116 (116)
.+++++.|+.|++||+.+++ ....+.+|...|.+++|+|++ ++|++++.|
T Consensus 172 ~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 99999999999999998765 556778899999999999984 899999876
No 63
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.87 E-value=1.8e-20 Score=125.56 Aligned_cols=108 Identities=17% Similarity=0.284 Sum_probs=100.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|++++|+| +++++++++.++.|++||..+++.+..+.+| ...|.+++|+|+++++++++.|+.|++||
T Consensus 613 ~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h------~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 613 PHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAH------EDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccC------CCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 3788999999999 8899999999999999999999999999988 67899999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECC--CCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDP--QGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~s~d 116 (116)
+.+++.+..+..|...+.+++|+| ++.++++++.|
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d 722 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSND 722 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETT
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCC
Confidence 999999999999999999999999 55688888765
No 64
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.87 E-value=5e-20 Score=110.68 Aligned_cols=105 Identities=14% Similarity=0.233 Sum_probs=93.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~ 81 (116)
+...|.+++|+| +++++++++.++.|++||+ +++.+..+..| ...+.+++|+|+++ ++++++.|+.|++||
T Consensus 162 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h------~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 162 WDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLH------KAKVTHAEFNPRCDWLMATSSVDATVKLWD 233 (383)
T ss_dssp SSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECS------SSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccC------CCcEEEEEECCCCCCEEEEEeCCCEEEEEe
Confidence 346799999999 8899999999999999999 47788888888 67899999999998 999999999999999
Q ss_pred CCC----CeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 82 NVS----GKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
+.+ +..+..+ .|...+.+++|+| ++++|++++.|
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 234 LRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp GGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESS
T ss_pred CCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCC
Confidence 987 6666666 5888999999999 99999999865
No 65
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.87 E-value=1.2e-20 Score=115.35 Aligned_cols=110 Identities=14% Similarity=0.141 Sum_probs=90.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++|+|.++++|++++.|+.|++||+.++........+.. ...+.+++++|++.++++++.|+.|++||
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~g~~dg~i~~wd 237 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTI----NIWFCSLDVSASSRMVVTGDNVGNVILLN 237 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSC----SCCCCCEEEETTTTEEEEECSSSBEEEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCC----CccEEEEEECCCCCEEEEEeCCCcEeeec
Confidence 47899999999986789999999999999999986543333333321 34578899999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
++ ++.+..+..|...|.+++|+|+++ +|++++.|
T Consensus 238 ~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 238 MD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp SS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred cC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 87 555667778999999999999876 67788765
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.87 E-value=1e-19 Score=107.13 Aligned_cols=106 Identities=14% Similarity=0.153 Sum_probs=96.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...+.++.|+| +++.+++++.++.+++||+.+++.+..+..+ ...+.+++|+|+++.+++++.|+.|++||+
T Consensus 140 ~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 140 SAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH------TDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp SSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecc------cCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 567789999999 8899999999999999999999888888887 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++.+..+. +...+.+++|+|+++++++++.|
T Consensus 213 ~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 213 REGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCceEeeec-CCCceEEEEECCCCCEEEEEcCC
Confidence 9998887775 66789999999999999998754
No 67
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6.4e-20 Score=107.17 Aligned_cols=104 Identities=15% Similarity=0.234 Sum_probs=93.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...+.++.|+| ++. +++++.++.+++||+.+++.+..+..+ ...+.+++|+|++ .+++++.|+.|++||+
T Consensus 183 ~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 183 HNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGH------ESFVYCIKLLPNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp CSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred CcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcC------CceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence 678899999999 656 889999999999999999999999888 6789999999999 5889999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+..+...+.+++|+|+++++ +++.|
T Consensus 254 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~d 286 (313)
T 3odt_A 254 ENGSLKQVITLPAISIWSVDCMSNGDII-VGSSD 286 (313)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEE-EEETT
T ss_pred CCCceeEEEeccCceEEEEEEccCCCEE-EEeCC
Confidence 9999999999888899999999999854 56554
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.2e-20 Score=111.19 Aligned_cols=106 Identities=10% Similarity=0.094 Sum_probs=98.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|+| +++++++++.++.+++||+.+++.+..+..+ ...+.+++|+|++ .+++++.|+.|++||+
T Consensus 246 ~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 246 HHGPISVLEFND-TNKLLLSASDDGTLRIWHGGNGNSQNCFYGH------SQSIVSASWVGDD-KVISCSMDGSVRLWSL 317 (425)
T ss_dssp CSSCEEEEEEET-TTTEEEEEETTSCEEEECSSSBSCSEEECCC------SSCEEEEEEETTT-EEEEEETTSEEEEEET
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCccceEecCC------CccEEEEEECCCC-EEEEEeCCCcEEEEEC
Confidence 678899999999 7889999999999999999988888888877 6789999999999 9999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+..|...+.+++|+|++++|++++.|
T Consensus 318 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 318 KQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp TTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred CCCcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence 9999999998888999999999999999998865
No 69
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.6e-20 Score=117.40 Aligned_cols=107 Identities=13% Similarity=0.116 Sum_probs=85.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.+++|+| ++..|++++.++.+++|+... .+..+. +.... ....+.+++|+|+|+++++++.||+|++|++
T Consensus 84 ~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~-~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 84 PVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNL-SSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp CSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCS-TTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCcc-ccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 467899999999 889999999999999999643 555555 42100 0125999999999999999999999999999
Q ss_pred CCCe-------EEEEe----ecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGK-------LVHSM----VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~-------~~~~~----~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.++. .+..+ .+|...|.+++|+|+| +++++.|
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D 201 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN 201 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC
Confidence 8875 35665 4567899999999999 6666654
No 70
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.4e-20 Score=122.53 Aligned_cols=107 Identities=16% Similarity=0.238 Sum_probs=90.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-------------------------------------------
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK------------------------------------------- 38 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~------------------------------------------- 38 (116)
.|...|.+++|+| ++++|++++.|+.|++|++.+++
T Consensus 486 ~h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 564 (902)
T 2oaj_A 486 AKELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQG 564 (902)
T ss_dssp SSSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEE
T ss_pred CCCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCc
Confidence 4677899999999 88999999999999999987652
Q ss_pred --eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE-----ee-cccccEEEEEEC-----C
Q psy17133 39 --PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS-----MV-AHLDAVTSLAVD-----P 105 (116)
Q Consensus 39 --~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~-----~~-~~~~~v~~~~~~-----~ 105 (116)
++..+.+| .+.|++++|+|+| ++++++.|++|++||++++..+.. +. +|...|++++|+ |
T Consensus 565 ~~~~~~l~~h------~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~ 637 (902)
T 2oaj_A 565 FMPSTAVHAN------KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGD 637 (902)
T ss_dssp EEEEEEECCC------SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTT
T ss_pred cceeEEEEcC------CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCC
Confidence 24455566 7789999999999 999999999999999988776642 22 677889999999 8
Q ss_pred CC---cEEEeeecC
Q psy17133 106 QG---LYILSGTYQ 116 (116)
Q Consensus 106 ~~---~~l~~~s~d 116 (116)
|| ++|++++.|
T Consensus 638 Dg~~~~~l~sgs~D 651 (902)
T 2oaj_A 638 DGYSSILMVCGTDM 651 (902)
T ss_dssp SSSEEEEEEEEETT
T ss_pred CCCcceEEEEEecC
Confidence 85 899999876
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.86 E-value=6.1e-20 Score=110.47 Aligned_cols=109 Identities=24% Similarity=0.327 Sum_probs=96.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEec---CCcCcCCCCceeEEEEcCCCCEEEEEeCC---Ce
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS---SQFGVSGGGGINRVVCHPTLPLTITAHDD---RH 76 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~ 76 (116)
|...|.+++|+| ++ .+++++.++.+++||+.+++.+..+.. |... ...+.+++|+|++.++++++.| +.
T Consensus 185 ~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~---~~~i~~i~~~~~~~~l~~~~~d~~~g~ 259 (397)
T 1sq9_A 185 PSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINN---SNSIRSVKFSPQGSLLAIAHDSNSFGC 259 (397)
T ss_dssp SCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CC---CCCEEEEEECSSTTEEEEEEEETTEEE
T ss_pred CCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEecccccccc---CCccceEEECCCCCEEEEEecCCCCce
Confidence 577899999999 67 999999999999999999988888887 4000 2579999999999999999999 99
Q ss_pred EEEEECCCCeEEEEeec-------------ccccEEEEEECCCCcEEEeeecC
Q psy17133 77 IRFFDNVSGKLVHSMVA-------------HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|++||+.+++.+..+.. |...+.+++|+|++++|++++.|
T Consensus 260 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 260 ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 99999999999998887 88999999999999999999875
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.86 E-value=6e-20 Score=123.11 Aligned_cols=108 Identities=17% Similarity=0.200 Sum_probs=100.3
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRF 79 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~ 79 (116)
.|.+.|.+++|+| +++++++++.|+.|++||+.+++.+..+.+| ...+.+++|+| ++.++++++.|+.|++
T Consensus 655 ~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 655 AHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEH------SEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred cCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCC------CCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 3788999999999 8899999999999999999999999999988 67899999999 4568999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
||+.+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred EECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 9999999999999999999999999999999999875
No 73
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.8e-19 Score=107.13 Aligned_cols=106 Identities=18% Similarity=0.318 Sum_probs=97.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR------- 75 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~------- 75 (116)
|.+.|.++.|+| +++++++++.++.+++||+.+++.+..+... ..+..++|+|+++.+++++.++
T Consensus 217 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 288 (369)
T 3zwl_B 217 HEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQVLKKYETD-------CPLNTAVITPLKEFIILGGGQEAKDVTTT 288 (369)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECS-------SCEEEEEECSSSSEEEEEECCC-------
T ss_pred CCCceeEEEECC-CCCEEEEecCCceEEEEECCCCceeeeecCC-------CCceeEEecCCCceEEEeecCCCceEEEE
Confidence 678899999999 8899999999999999999999888888743 5799999999999999999887
Q ss_pred -------eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 76 -------HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 76 -------~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++||..+++.+..+..|...|.+++|+|++++|++++.|
T Consensus 289 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 289 SANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp ------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred ecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC
Confidence 89999999999999999999999999999999999999876
No 74
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=4.7e-20 Score=110.34 Aligned_cols=108 Identities=10% Similarity=0.065 Sum_probs=88.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCe-EEEEECCCCceeEEEe-c-CCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSA-CVLFDLETGKPVVRID-S-SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~-~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
.|.+.|.+++|+| ++++|++++.|+. |++||+.+++.+..+. + | ...|.+++|+|+++++++++.|+.|+
T Consensus 193 ~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h------~~~v~~~~~s~~~~~l~s~s~d~~v~ 265 (355)
T 3vu4_A 193 AHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD------RADVVDMKWSTDGSKLAVVSDKWTLH 265 (355)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC------CSCEEEEEECTTSCEEEEEETTCEEE
T ss_pred ccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC------CCcEEEEEECCCCCEEEEEECCCEEE
Confidence 3778999999999 8899999999998 9999999999999998 5 6 67899999999999999999999999
Q ss_pred EEECCCCeEE--EEe--------------------e-cccccEEEEEECCCCcEEEeeecC
Q psy17133 79 FFDNVSGKLV--HSM--------------------V-AHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~~~~--~~~--------------------~-~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+||++.+... ..+ . ........++|+++++.+++++.|
T Consensus 266 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 266 VFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp EEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred EEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 9999754211 111 0 011123568999999999988754
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=3.1e-20 Score=120.06 Aligned_cols=107 Identities=20% Similarity=0.338 Sum_probs=98.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.++.|+| ++++|++++.++.|++|++.+++.+..+.+| ...+.+++|+|+++.+++++.|+.|++|++
T Consensus 54 ~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 54 TETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH------PDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp CSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred CCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecC------CCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 678899999999 8899999999999999999999999999888 678999999999999999999999999999
Q ss_pred CCC-eEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 83 VSG-KLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
.++ .....+..|...+.+++|+| +++.|++++.|
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 887 66777888999999999999 88899998865
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.86 E-value=5.8e-20 Score=109.64 Aligned_cols=104 Identities=14% Similarity=0.147 Sum_probs=94.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC------------------CCceeEEEecCCcCcCCCCceeEEEEcCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE------------------TGKPVVRIDSSQFGVSGGGGINRVVCHPT 64 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 64 (116)
|.+.|.++.|+| +++++++++.++.+++||+. .++.+..+..+ ...+.+++|+|+
T Consensus 141 ~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~ 213 (372)
T 1k8k_C 141 IRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS------CGWVHGVCFSAN 213 (372)
T ss_dssp CCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC------SSCEEEEEECSS
T ss_pred cCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC------CCeEEEEEECCC
Confidence 577899999999 78999999999999999953 56777777777 678999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 65 LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+..+++++.|+.|++||+++++.+..+..|...+.+++|+|++++++++
T Consensus 214 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 214 GSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp SSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 9999999999999999999999999999888899999999999998877
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.86 E-value=4e-20 Score=108.95 Aligned_cols=113 Identities=18% Similarity=0.160 Sum_probs=89.4
Q ss_pred CCCCceEEEEccCC--CcEEEEeeCCCeEEEEECCCCceeEEEec-----------------------------------
Q psy17133 3 YNGTPTSIDFVRDE--STKMVTAFDNSACVLFDLETGKPVVRIDS----------------------------------- 45 (116)
Q Consensus 3 ~~~~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~~~~~~~~~~----------------------------------- 45 (116)
|.+.|.+++|+| + ++++++++.++.|++||+.+++.+..+..
T Consensus 109 ~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 109 SKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp CSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred cCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEE
Confidence 677899999999 6 78999999999999999875542111100
Q ss_pred -------------------CCcCcCCCCceeEEEEcCCC----CEEEEEeCCCeEEEEECCCC-----------------
Q psy17133 46 -------------------SQFGVSGGGGINRVVCHPTL----PLTITAHDDRHIRFFDNVSG----------------- 85 (116)
Q Consensus 46 -------------------~~~~~~~~~~i~~~~~~~~~----~~~~~~~~d~~i~~~~~~~~----------------- 85 (116)
......|...|.+++|+|++ .++++++.|+.|++||+.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 267 (351)
T 3f3f_A 188 SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFD 267 (351)
T ss_dssp EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------------
T ss_pred ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccC
Confidence 00001346789999999998 79999999999999998764
Q ss_pred -----------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 86 -----------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 86 -----------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+..+.+|...|.+++|+|++++|++++.|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 327 (351)
T 3f3f_A 268 NSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD 327 (351)
T ss_dssp -----------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETT
T ss_pred CCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCC
Confidence 5666677888999999999999999999876
No 78
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.86 E-value=4.6e-20 Score=111.45 Aligned_cols=106 Identities=15% Similarity=0.060 Sum_probs=96.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...+.++.|+| ++ .+++++.++.+++||+.+++.+..+..+ ...+.+++|+|+++++++++.|+.|++|++
T Consensus 288 ~~~~i~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 288 HSQSIVSASWVG-DD-KVISCSMDGSVRLWSLKQNTLLALSIVD------GVPIFAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp CSSCEEEEEEET-TT-EEEEEETTSEEEEEETTTTEEEEEEECT------TCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred CCccEEEEEECC-CC-EEEEEeCCCcEEEEECCCCcEeEecccC------CccEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 678899999999 66 9999999999999999999988888887 568999999999999999999999999999
Q ss_pred CCCe--------------------EEEEeecccc--cEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGK--------------------LVHSMVAHLD--AVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~--------------------~~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++ .+..+..|.. .|.+++|+|++++|++++.|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 415 (425)
T 1r5m_A 360 KKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL 415 (425)
T ss_dssp HHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred CCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence 9887 7888888865 89999999999999998875
No 79
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=5e-21 Score=117.34 Aligned_cols=106 Identities=18% Similarity=0.215 Sum_probs=88.7
Q ss_pred CCCceEEEEccCCCcEEE----EeeCCCeEEEEECCCC--------ce---eEEEecCCcCcCCCCceeEEEEcCC-CCE
Q psy17133 4 NGTPTSIDFVRDESTKMV----TAFDNSACVLFDLETG--------KP---VVRIDSSQFGVSGGGGINRVVCHPT-LPL 67 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~----~~~~~~~v~i~~~~~~--------~~---~~~~~~~~~~~~~~~~i~~~~~~~~-~~~ 67 (116)
.+.|.+++|+| ++++|+ +++.++.|++||+.++ +. ...+.+| ...|.+++|+|+ +.+
T Consensus 92 ~~~v~~l~~sp-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 92 KFPIHHLALSC-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA------GGMVIDMKWNPTVPSM 164 (434)
T ss_dssp SSCEEEEEECT-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG------GGSEEEEEECSSCTTE
T ss_pred CCcccEEEEcC-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCC------CCceEEEEECCCCCCE
Confidence 45699999999 788888 7888999999998654 22 2333445 678999999998 789
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 68 TITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 68 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+++++.|+.|++||++++........|...+.+++|+|+|++|++++.|
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d 213 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN 213 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT
T ss_pred EEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC
Confidence 9999999999999999887766666788899999999999999999875
No 80
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.5e-20 Score=113.64 Aligned_cols=107 Identities=13% Similarity=0.236 Sum_probs=95.2
Q ss_pred CCCceEEEEccCCCcEEEEeeCCC---eEEEEECCCC-ceeEEEe-cCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNS---ACVLFDLETG-KPVVRID-SSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHI 77 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~---~v~i~~~~~~-~~~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i 77 (116)
...+.+++|+|++..++++++.++ .|++||+.++ +.+..+. +| ...+.+++|+| ++.++++++.|+.|
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~~l~s~~~dg~v 287 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH------QKGILSLDWCHQDEHLLLSSGRDNTV 287 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC------SSCEEEEEECSSCSSCEEEEESSSEE
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc------cCceeEEEeCCCCCCeEEEEeCCCCE
Confidence 678999999995457899999888 9999999976 5666666 66 67899999999 89999999999999
Q ss_pred EEEECCCCeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133 78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d 116 (116)
++||+++++.+..+..|...+.+++|+|++ ++|++++.|
T Consensus 288 ~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 288 LLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp EEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred EEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 999999999999999999999999999998 899998865
No 81
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.86 E-value=1.6e-19 Score=108.54 Aligned_cols=110 Identities=11% Similarity=0.047 Sum_probs=94.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++|+|++++.+++++.++.|++||+.+ +.+..+..+.. +...+.+++|+|+++.+++++.|+.|++||
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDS---WDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCC---SSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCC---CCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 37889999999996578999999999999999985 55666655421 146799999999999999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
+ +++.+..+..|...|.+++|+|+++ +|++++.|
T Consensus 192 ~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 192 L-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp T-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred C-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC
Confidence 9 5778888888999999999999999 89998875
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.86 E-value=2e-19 Score=108.93 Aligned_cols=105 Identities=13% Similarity=0.209 Sum_probs=95.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|+| +++++++++.++.+++||+.+++.+..+.+| ...+.+++| ++..+++++.|+.|++||+
T Consensus 133 ~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~v~~~~~--~~~~l~~~~~dg~i~i~d~ 203 (401)
T 4aez_A 133 ESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGH------QARVGCLSW--NRHVLSSGSRSGAIHHHDV 203 (401)
T ss_dssp TTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCC------CCceEEEEE--CCCEEEEEcCCCCEEEEec
Confidence 678899999999 8899999999999999999999999999888 678999999 4679999999999999999
Q ss_pred C-CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 V-SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+ .......+..|...+.+++|+|++++|++++.|
T Consensus 204 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 204 RIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC
Confidence 8 566677888899999999999999999999875
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3e-20 Score=120.11 Aligned_cols=108 Identities=16% Similarity=0.201 Sum_probs=95.8
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i 77 (116)
.|.+.|.+++|+| +++++++++.++.|++|++. +++.+..+.+| ...|.+++|+|+ +..+++++.|+.|
T Consensus 7 gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h------~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 7 AHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH------EGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCC------SSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred cCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCC------cCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 4789999999999 78999999999999999997 44566777777 678999999988 8999999999999
Q ss_pred EEEECCCCe--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133 78 RFFDNVSGK--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d 116 (116)
++||+.+++ ....+..|...|.+++|+|+ ++.+++++.|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 999999887 56667788999999999999 9999999875
No 84
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.85 E-value=1.1e-19 Score=114.35 Aligned_cols=107 Identities=10% Similarity=0.157 Sum_probs=95.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCc-eeEEEEcC--CCCEEEEEeCC
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGG-INRVVCHP--TLPLTITAHDD 74 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~-i~~~~~~~--~~~~~~~~~~d 74 (116)
.|.+.|.+++|+| +++++++++ ++.+.+|++.++ +....+.+| ... |.+++|+| +++++++++.|
T Consensus 16 ~~~~~v~~~~~sp-dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h------~~~~v~~~~~sp~~~~~~l~s~~~d 87 (615)
T 1pgu_A 16 TQRNFTTHLSYDP-TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGH------GSSVVTTVKFSPIKGSQYLCSGDES 87 (615)
T ss_dssp CCTTCCCCCEEET-TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTT------TTSCEEEEEECSSTTCCEEEEEETT
T ss_pred CccCceeEEEECC-CCCEEEEec-CCeEEEEECCCCCCccccceEEecC------CCceEEEEEECcCCCCCEEEEecCC
Confidence 3678899999999 889998888 789999999988 888899888 678 99999999 99999999999
Q ss_pred CeEEEEECCCC--------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 75 RHIRFFDNVSG--------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.|++|++.++ +.+..+..|...+.+++|+|++++|++++.|
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 137 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 137 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence 99999999754 6667777888999999999999999988753
No 85
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.3e-20 Score=111.07 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=85.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee-EEEec-CCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV-VRIDS-SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~-~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
+...+.+++|+| ++.++++|+.|+.|++||+.+++.+ ..+.. | ...|.+++|+|++.++++++.+ .|++|
T Consensus 169 ~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h------~~~v~~l~fs~~g~~l~s~~~~-~v~iw 240 (343)
T 3lrv_A 169 SDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDE------EAKIKEVKFADNGYWMVVECDQ-TVVCF 240 (343)
T ss_dssp SSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCT------TSCEEEEEECTTSSEEEEEESS-BEEEE
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccC------CCCEEEEEEeCCCCEEEEEeCC-eEEEE
Confidence 345799999999 8899999999999999999988877 77877 6 6789999999999999999955 99999
Q ss_pred ECCCCeEEEEeec---ccccE--EEEEECCCCcEEEeeec
Q psy17133 81 DNVSGKLVHSMVA---HLDAV--TSLAVDPQGLYILSGTY 115 (116)
Q Consensus 81 ~~~~~~~~~~~~~---~~~~v--~~~~~~~~~~~l~~~s~ 115 (116)
|+++++....+.. +...+ .+++|+|++++|++++.
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 241 DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp ETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred EcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 9998766544332 22333 36999999999999764
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.85 E-value=2.7e-19 Score=109.29 Aligned_cols=109 Identities=15% Similarity=0.220 Sum_probs=94.0
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i 77 (116)
.|.+.|.+++|+|+++..+++++.++.|++||+.++ +.+..+..+ ...+.+++|+|+++ ++++++.|+.|
T Consensus 229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~v~~i~~~p~~~~~l~tg~~dg~v 302 (430)
T 2xyi_A 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH------TAEVNCLSFNPYSEFILATGSADKTV 302 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC------SSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC------CCCeEEEEeCCCCCCEEEEEeCCCeE
Confidence 467889999999977789999999999999999876 566777777 67899999999987 78899999999
Q ss_pred EEEECCC-CeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 78 RFFDNVS-GKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
++||+++ +..+..+..|...+.+++|+|+++ +|++++.|
T Consensus 303 ~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 303 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp EEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred EEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC
Confidence 9999987 566777888999999999999985 67888765
No 87
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.85 E-value=2e-20 Score=110.41 Aligned_cols=108 Identities=7% Similarity=0.049 Sum_probs=87.5
Q ss_pred CCCCceEEEEccCC----------------CcEEEEeeCCCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcC
Q psy17133 3 YNGTPTSIDFVRDE----------------STKMVTAFDNSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHP 63 (116)
Q Consensus 3 ~~~~v~~~~~~~~~----------------~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~ 63 (116)
|...+.++.|+|+. +.+|++++.|+.|++||.... +.+..+.+| ...|.+++|+|
T Consensus 149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h------~~~V~~v~~sp 222 (316)
T 3bg1_A 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH------SDWVRDVAWAP 222 (316)
T ss_dssp SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC------SSCEEEEECCC
T ss_pred ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC------CCceEEEEecC
Confidence 56678889999831 368999999999999999754 345566777 67899999999
Q ss_pred CC----CEEEEEeCCCeEEEEECCCC---e-EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 64 TL----PLTITAHDDRHIRFFDNVSG---K-LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 64 ~~----~~~~~~~~d~~i~~~~~~~~---~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++ ..+++++.|+.|++|++.+. + ....+..|...|.+++|+|++++|++++.|
T Consensus 223 ~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 223 SIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGD 283 (316)
T ss_dssp CSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESS
T ss_pred CCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCC
Confidence 86 78999999999999998762 1 122345577899999999999999999876
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.85 E-value=7.5e-20 Score=111.53 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=87.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----------eeEEEecCCcC------cCCCCceeEEEEcCCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----------PVVRIDSSQFG------VSGGGGINRVVCHPTL 65 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----------~~~~~~~~~~~------~~~~~~i~~~~~~~~~ 65 (116)
+.+.|.+++|+| ++++|++++.++.|++|++.+++ ....+.+|... ......|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999 88999999999999999998766 46677777210 0000679999999998
Q ss_pred --CEEEEEeCCCeEEEEECCCCeEE---------------------------------------EE-eecccccEEEEEE
Q psy17133 66 --PLTITAHDDRHIRFFDNVSGKLV---------------------------------------HS-MVAHLDAVTSLAV 103 (116)
Q Consensus 66 --~~~~~~~~d~~i~~~~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 103 (116)
..+++++.|+.|++|++.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764432 12 2468889999999
Q ss_pred CCCCcEEEee
Q psy17133 104 DPQGLYILSG 113 (116)
Q Consensus 104 ~~~~~~l~~~ 113 (116)
+|++++|+++
T Consensus 186 ~~~~~~l~s~ 195 (447)
T 3dw8_B 186 NSDYETYLSA 195 (447)
T ss_dssp CTTSSEEEEE
T ss_pred cCCCCEEEEe
Confidence 9999999987
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.84 E-value=2.3e-19 Score=106.09 Aligned_cols=112 Identities=11% Similarity=0.076 Sum_probs=95.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC------ceeEEEecCCcC---cCCCCceeEEEEcCCCCEEEEEeC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG------KPVVRIDSSQFG---VSGGGGINRVVCHPTLPLTITAHD 73 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~------~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~ 73 (116)
+...+.++.|+|.+++.+++++.++.+++|++... +....+..+... ..|...+.+++|+|+++++++++.
T Consensus 192 ~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 271 (342)
T 1yfq_A 192 LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271 (342)
T ss_dssp CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET
T ss_pred CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC
Confidence 56678999999823588999999999999999876 677788777320 112338999999999999999999
Q ss_pred CCeEEEEECCCCeEEEEeecc-cccEEEEEECCCCcEEEeeecC
Q psy17133 74 DRHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d 116 (116)
|+.|++||+.+++.+..+..| ...|.+++ |++++|++++.|
T Consensus 272 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 272 DGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSD 313 (342)
T ss_dssp TSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEEC
T ss_pred CceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecC
Confidence 999999999999999999888 89999999 999999999876
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.84 E-value=1.6e-19 Score=107.38 Aligned_cols=114 Identities=14% Similarity=0.160 Sum_probs=94.3
Q ss_pred CCCCCceEEEEccC---CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC----CCEEEEEeCC
Q psy17133 2 FYNGTPTSIDFVRD---ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT----LPLTITAHDD 74 (116)
Q Consensus 2 ~~~~~v~~~~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~d 74 (116)
.|.+.|.+++|+|+ +...+++++.++.|++|+..+++.+..+..+.. ..+...+.+++|+|+ +.++++++.|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVD-ADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEEC-SCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccc-cCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 37889999999983 345566666677999999998877766654321 012467999999998 6699999999
Q ss_pred CeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133 75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
+.|++||+.+++.+..+..|...|.+++|+| ++++|++++.|
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d 137 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD 137 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC
Confidence 9999999999999999999999999999999 99999999875
No 91
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.3e-19 Score=117.92 Aligned_cols=104 Identities=12% Similarity=0.155 Sum_probs=91.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|+| ++++|++|+.|+.|++|+....+....+. + ...|.+++|+| ++++++++.|+.|++||+
T Consensus 16 h~~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~------~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~ 86 (902)
T 2oaj_A 16 MSSKPIAAAFDF-TQNLLAIATVTGEVHIYGQQQVEVVIKLE-D------RSAIKEMRFVK-GIYLVVINAKDTVYVLSL 86 (902)
T ss_dssp CSSCEEEEEEET-TTTEEEEEETTSEEEEECSTTCEEEEECS-S------CCCEEEEEEET-TTEEEEEETTCEEEEEET
T ss_pred CCCCcEEEEECC-CCCEEEEEeCCCEEEEEeCCCcEEEEEcC-C------CCCEEEEEEcC-CCEEEEEECcCeEEEEEC
Confidence 678999999999 88999999999999999988666544433 3 46799999999 889999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++.+..+. +...|.+++|+|++++|++|+.|
T Consensus 87 ~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~d 119 (902)
T 2oaj_A 87 YSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQN 119 (902)
T ss_dssp TTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETT
T ss_pred CCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCC
Confidence 9999888886 66789999999999999999865
No 92
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.84 E-value=2.9e-19 Score=106.92 Aligned_cols=88 Identities=18% Similarity=0.196 Sum_probs=77.3
Q ss_pred eeCCCeEEEEECCCCc---------------e-eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe-EEEEECCCC
Q psy17133 23 AFDNSACVLFDLETGK---------------P-VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH-IRFFDNVSG 85 (116)
Q Consensus 23 ~~~~~~v~i~~~~~~~---------------~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-i~~~~~~~~ 85 (116)
++.++.|++||+.+++ + +..+.+| ...|.+++|+|+++++++++.|++ |++||++++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h------~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~ 228 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH------TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG 228 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCC------SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc------CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 5788999999998654 1 5677777 678999999999999999999998 999999999
Q ss_pred eEEEEee-c-ccccEEEEEECCCCcEEEeeecC
Q psy17133 86 KLVHSMV-A-HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 86 ~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+..+. + |...|.+++|+|++++|++++.|
T Consensus 229 ~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 229 VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK 261 (355)
T ss_dssp CEEEEEECTTCCSCEEEEEECTTSCEEEEEETT
T ss_pred cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC
Confidence 9999988 5 88999999999999999999876
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.84 E-value=3.5e-19 Score=108.82 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=92.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFF 80 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~ 80 (116)
|.+.|.+++|+|++..++++++.++.|++||+.. .+.+..+..| ...+.+++|+|+++ ++++++.|+.|++|
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h------~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH------KDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC------SSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC------CCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 6788999999994444788999999999999987 5678888887 67899999999985 78999999999999
Q ss_pred ECCC--------------CeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 81 DNVS--------------GKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 81 ~~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
|+.. .+.+....+|...|..++|+|+++ +|++++.|
T Consensus 350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d 400 (430)
T 2xyi_A 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED 400 (430)
T ss_dssp EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECC
Confidence 9976 356677778888999999999999 88888765
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.84 E-value=1.6e-19 Score=106.75 Aligned_cols=106 Identities=4% Similarity=-0.025 Sum_probs=92.1
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHI 77 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i 77 (116)
.|.+.|.+++|+| +++++++++.++.|++|++.+++ ....+..+ ...+.+++|+|++. .+++++.|+.|
T Consensus 9 ~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~dg~i 81 (342)
T 1yfq_A 9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY------KHPLLCCNFIDNTDLQIYVGTVQGEI 81 (342)
T ss_dssp CCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC------SSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred CCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeec------CCceEEEEECCCCCcEEEEEcCCCeE
Confidence 4788999999999 78999999999999999998776 24444555 57899999999999 99999999999
Q ss_pred EEEEC-CCCeEEEEeec--ccccEEEEEECCCCcEEEeeecC
Q psy17133 78 RFFDN-VSGKLVHSMVA--HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 78 ~~~~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++|++ .+++. ..+.. |...|.+++|+| +++|++++.|
T Consensus 82 ~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d 121 (342)
T 1yfq_A 82 LKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWD 121 (342)
T ss_dssp EEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETT
T ss_pred EEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCC
Confidence 99999 87765 66777 889999999999 9999998875
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.84 E-value=1.6e-19 Score=110.10 Aligned_cols=111 Identities=17% Similarity=0.192 Sum_probs=87.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEEEecCC-cCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVRIDSSQ-FGVSGGGGINRVVCHPTL-PLTITAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~ 79 (116)
|...|.+++|+| ++++++++ .|+.|++||+.. ++....+.... ....|...+.+++|+|++ .++++++.|+.|++
T Consensus 176 h~~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 176 HTYHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CSSCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCcceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 778899999999 78999998 799999999984 33333221100 011226789999999998 89999999999999
Q ss_pred EECCCCeE----EEEeecccc------------cEEEEEECCCCcEEEeeec
Q psy17133 80 FDNVSGKL----VHSMVAHLD------------AVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 80 ~~~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~s~ 115 (116)
||+++++. ...+..+.. .+.+++|+|++++|++++.
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 99998876 677776665 8999999999999998763
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.84 E-value=6.9e-20 Score=108.70 Aligned_cols=108 Identities=17% Similarity=0.239 Sum_probs=91.1
Q ss_pred CCCCceEEEEccC--CCcEEEEeeCCCeEEEEECCCCceeEEEe-----cCCcCcCCCCceeEEEEcCCCC-EEEEEeCC
Q psy17133 3 YNGTPTSIDFVRD--ESTKMVTAFDNSACVLFDLETGKPVVRID-----SSQFGVSGGGGINRVVCHPTLP-LTITAHDD 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d 74 (116)
|...|.++.|+|. +++.+++++.++.+++||+.+++....+. .+ ...+.+++|+|+++ ++++++.|
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~d 281 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH------KSTVWQVRHLPQNRELFLTAGGA 281 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC------SSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC------cCCEEEEEECCCCCcEEEEEeCC
Confidence 5678999999984 46889999999999999998766544443 66 67899999999988 89999999
Q ss_pred CeEEEEECCCC-------------------eEEEEeecccccEEEEEECCCCcEEE-eeecC
Q psy17133 75 RHIRFFDNVSG-------------------KLVHSMVAHLDAVTSLAVDPQGLYIL-SGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~~~l~-~~s~d 116 (116)
+.|++||+.++ +.+..+..|...|.+++|+|++++|+ +++.|
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d 343 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD 343 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT
T ss_pred CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC
Confidence 99999998753 45667778999999999999999998 78765
No 97
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=6.5e-19 Score=105.17 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=93.2
Q ss_pred CCCCCceEEEEccC-CCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCe
Q psy17133 2 FYNGTPTSIDFVRD-ESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRH 76 (116)
Q Consensus 2 ~~~~~v~~~~~~~~-~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~ 76 (116)
.|.+.|.+++|+|+ +++++++++.|+.|++||+.+++ .+..+..+ ...+.+++|+|+ +..+++++.|+.
T Consensus 53 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~d~~ 126 (379)
T 3jrp_A 53 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH------SASVNSVQWAPHEYGPLLLVASSDGK 126 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC------SSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC------CcceEEEEeCCCCCCCEEEEecCCCc
Confidence 37789999999872 27999999999999999999876 56666666 678999999999 899999999999
Q ss_pred EEEEECCCCe--EEEEeecccccEEEEEECC-------------CCcEEEeeecC
Q psy17133 77 IRFFDNVSGK--LVHSMVAHLDAVTSLAVDP-------------QGLYILSGTYQ 116 (116)
Q Consensus 77 i~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~s~d 116 (116)
|++||+.++. ....+..|...+.+++|+| ++++|++++.|
T Consensus 127 i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 181 (379)
T 3jrp_A 127 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD 181 (379)
T ss_dssp EEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT
T ss_pred EEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC
Confidence 9999998763 3445667888999999999 69999998865
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=8e-19 Score=107.68 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=91.4
Q ss_pred CCCCceEEEEccCC---CcEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 3 YNGTPTSIDFVRDE---STKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~---~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
|.+.|.++.|+| + +.+|++++.|+.|++||+.+++.+..+ .+| ...+.+++|+ ++.++++++.|+.|+
T Consensus 194 h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h------~~~v~~~~~s-d~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 194 HVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH------KHFVSSICCG-KDYLLLSAGGDDKIF 265 (450)
T ss_dssp CSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC------SSCEEEEEEC-STTEEEEEESSSEEE
T ss_pred ccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC------CCceEEEEEC-CCCEEEEEeCCCeEE
Confidence 678899999999 6 789999999999999999988877774 466 6789999999 999999999999999
Q ss_pred EEECCCCeEEEEeecc-------------------------cccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAH-------------------------LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~-------------------------~~~v~~~~~~~~~~~l~~~s 114 (116)
+||+.+++.+..+..+ ...+..++|+|++++|++++
T Consensus 266 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 266 AWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999988877522 34688999999999999887
No 99
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.83 E-value=3.5e-19 Score=105.86 Aligned_cols=110 Identities=8% Similarity=0.099 Sum_probs=88.7
Q ss_pred CceEEEEccCCCcE----EEEeeCCCeEEEEECCCC---ceeEEEecCCcC------cCCCCceeEEEEcCCCCEEEEEe
Q psy17133 6 TPTSIDFVRDESTK----MVTAFDNSACVLFDLETG---KPVVRIDSSQFG------VSGGGGINRVVCHPTLPLTITAH 72 (116)
Q Consensus 6 ~v~~~~~~~~~~~~----l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~ 72 (116)
.+.++.+.+ +... +++++.++.+++|++... +.+..+..+... ..+...+.+++|+|+++++++++
T Consensus 214 ~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~ 292 (368)
T 3mmy_A 214 QHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG 292 (368)
T ss_dssp CEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE
T ss_pred CCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc
Confidence 344555554 3333 899999999999999876 556777777320 00111699999999999999999
Q ss_pred CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.|+.|++||+.+++.+..+..|...+.+++|+|++++|++++.|
T Consensus 293 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 293 SDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp TTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred cCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 99999999999999999999999999999999999999999865
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.7e-19 Score=110.64 Aligned_cols=106 Identities=17% Similarity=0.195 Sum_probs=93.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE----EEecCCcCcCCCCceeEEEEcCC---CCEEEEEeCCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV----RIDSSQFGVSGGGGINRVVCHPT---LPLTITAHDDR 75 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~d~ 75 (116)
+...|.+++|+| ++++|++++.++.+++|++.+++... .+.+| ...+.+++|+|+ ++++++++.|+
T Consensus 148 ~~~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~sp~~~~~~~l~s~~~d~ 220 (450)
T 2vdu_B 148 FSKRPNAISIAE-DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH------VSMLTDVHLIKDSDGHQFIITSDRDE 220 (450)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC------SSCEEEEEEEECTTSCEEEEEEETTS
T ss_pred CCCCceEEEEcC-CCCEEEEEeCCCcEEEEecCCcccccccceeeecc------cCceEEEEEcCCCCCCcEEEEEcCCC
Confidence 457789999999 88999999999999999998766443 55666 678999999999 99999999999
Q ss_pred eEEEEECCCCeEEEE-eecccccEEEEEECCCCcEEEeeecC
Q psy17133 76 HIRFFDNVSGKLVHS-MVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.|++||+.+++.+.. +.+|...|.+++|+ ++++|++++.|
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 999999999888777 55788999999999 99999999875
No 101
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.83 E-value=1.2e-18 Score=104.87 Aligned_cols=113 Identities=14% Similarity=0.220 Sum_probs=90.5
Q ss_pred CCCCceEEEEccCCCc-EEEEeeCCCeEEEEECCCCc-eeEEEecCCc---------CcCCCCceeEEEEcCCCCEEEEE
Q psy17133 3 YNGTPTSIDFVRDEST-KMVTAFDNSACVLFDLETGK-PVVRIDSSQF---------GVSGGGGINRVVCHPTLPLTITA 71 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~---------~~~~~~~i~~~~~~~~~~~~~~~ 71 (116)
|.+.|.+++|+| ++. .+++++.++.+++||+.++. ....+..+.. ...|...+.+++|+|++++++++
T Consensus 185 ~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 185 HRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 678899999999 555 68899999999999998665 3444422111 01346789999999999999999
Q ss_pred eCCCeEEEEECCCC-----------------------------------------------eEEEEeecccccEEEEEEC
Q psy17133 72 HDDRHIRFFDNVSG-----------------------------------------------KLVHSMVAHLDAVTSLAVD 104 (116)
Q Consensus 72 ~~d~~i~~~~~~~~-----------------------------------------------~~~~~~~~~~~~v~~~~~~ 104 (116)
+.|+.|++||+.++ +.+..+.+|...|.+++|+
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s 343 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQ 343 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEE
T ss_pred cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEc
Confidence 99999999998653 3455666788899999999
Q ss_pred CCCcEEEeeecC
Q psy17133 105 PQGLYILSGTYQ 116 (116)
Q Consensus 105 ~~~~~l~~~s~d 116 (116)
|++++|++++.|
T Consensus 344 ~~~~~l~s~~~d 355 (408)
T 4a11_B 344 SNFQELYSGSRD 355 (408)
T ss_dssp TTTTEEEEEETT
T ss_pred CCCCEEEEECCC
Confidence 999999999876
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.3e-19 Score=108.19 Aligned_cols=106 Identities=16% Similarity=0.232 Sum_probs=91.0
Q ss_pred CCCceEEE--EccCCCcEEEEeeCCCeEEEEECCCCceeEEEec--CCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 4 NGTPTSID--FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS--SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 4 ~~~v~~~~--~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
...+.++. +++ ++.++++++.++.|++||+.+++.+..+.. | ...+.+++|+|++.++++++.|+.|++
T Consensus 168 ~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h------~~~v~~~~~s~~~~~l~s~~~dg~i~i 240 (437)
T 3gre_A 168 NEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPR------HGAVSSICIDEECCVLILGTTRGIIDI 240 (437)
T ss_dssp CCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGG------GCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred ccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC------CCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 44556666 456 678999999999999999999999999987 5 578999999999999999999999999
Q ss_pred EECCCCeEEEEee-cccccEEEEEEC----CCCcEEEeeecC
Q psy17133 80 FDNVSGKLVHSMV-AHLDAVTSLAVD----PQGLYILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~v~~~~~~----~~~~~l~~~s~d 116 (116)
||+++++.+..+. .+...|.+++|+ |++++|++++.|
T Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d 282 (437)
T 3gre_A 241 WDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK 282 (437)
T ss_dssp EETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT
T ss_pred EEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC
Confidence 9999999988876 677789999665 568899998875
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.83 E-value=1.5e-19 Score=107.28 Aligned_cols=108 Identities=12% Similarity=0.127 Sum_probs=88.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCC---CCEEEEEeCCC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPT---LPLTITAHDDR 75 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~d~ 75 (116)
|.+.|.+++|+|++..++++++. ++.+++|++.+++...... .+ ...+.+++|+|+ +.++++++.|+
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEK------AKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEE------SSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecc------cCcEEEEEEcCCCCCCceEEEecCCC
Confidence 77899999999943345566665 8999999999877654433 44 568999999998 69999999999
Q ss_pred eEEEEECCCCe-EEEEeecccccEEEEE------ECCCCcEEEeeecC
Q psy17133 76 HIRFFDNVSGK-LVHSMVAHLDAVTSLA------VDPQGLYILSGTYQ 116 (116)
Q Consensus 76 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~l~~~s~d 116 (116)
.|++||+.+++ .+..+..|...+.++. |+|++++|++++.|
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d 138 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD 138 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC
Confidence 99999999887 7788888999999995 57899999999875
No 104
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.2e-19 Score=107.31 Aligned_cols=114 Identities=16% Similarity=0.155 Sum_probs=96.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCC---eEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDR---HIR 78 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~---~i~ 78 (116)
|.+.|.+++|+|+++.++++++.++.|++||+.+++.+..+..+.....|...+.+++|+|++ .++++++.++ .|+
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 678899999999447899999999999999999998888887653222224679999999997 6899999998 999
Q ss_pred EEECCCC-eEEEEee-cccccEEEEEECC-CCcEEEeeecC
Q psy17133 79 FFDNVSG-KLVHSMV-AHLDAVTSLAVDP-QGLYILSGTYQ 116 (116)
Q Consensus 79 ~~~~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~s~d 116 (116)
+||++++ +.+..+. .|...+.+++|+| ++++|++++.|
T Consensus 244 ~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 284 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD 284 (416)
T ss_dssp EEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS
T ss_pred EEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC
Confidence 9999986 5666676 7889999999999 99999999865
No 105
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.83 E-value=8.8e-19 Score=109.59 Aligned_cols=107 Identities=7% Similarity=-0.008 Sum_probs=87.6
Q ss_pred CCCCceEEEEccC-----CCcEEEEeeCCCeEEEEECCCCce-----------eEEEecCCcCcCCCCceeEEEEcCCCC
Q psy17133 3 YNGTPTSIDFVRD-----ESTKMVTAFDNSACVLFDLETGKP-----------VVRIDSSQFGVSGGGGINRVVCHPTLP 66 (116)
Q Consensus 3 ~~~~v~~~~~~~~-----~~~~l~~~~~~~~v~i~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (116)
|.+.|.+++|+|+ ++.+|++++.|+.|++||+.++.. ...+.+| ...+.+++|++++
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h------~~~v~sv~~s~~~- 278 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLA------DSLITTFDFLSPT- 278 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCT------TTCEEEEEESSSS-
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcC------CCCEEEEEecCCC-
Confidence 4578999999994 257999999999999999976532 2355556 6789999999864
Q ss_pred EEEEEeCCCeEEEEECCCCe-EEEEeecccccEEEE--EECCCC-cEEEeeecC
Q psy17133 67 LTITAHDDRHIRFFDNVSGK-LVHSMVAHLDAVTSL--AVDPQG-LYILSGTYQ 116 (116)
Q Consensus 67 ~~~~~~~d~~i~~~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~s~d 116 (116)
.+++++.|++|++||+++++ ....+..|...|.++ +|+|++ ++|+++|.|
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 79999999999999998764 445677899999999 578888 899999986
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.82 E-value=2.7e-19 Score=107.49 Aligned_cols=75 Identities=15% Similarity=0.059 Sum_probs=69.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|...|++++|+| ++++|++++.|+.|++||+.+++.+..+ .+| ...|++++|+||+++|++++.|++|+||+
T Consensus 268 ~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH------~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 268 RFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAH------SFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp SCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSS------SSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred CCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcc------cCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 567899999999 8899999999999999999999988886 577 67899999999999999999999999999
Q ss_pred CCC
Q psy17133 82 NVS 84 (116)
Q Consensus 82 ~~~ 84 (116)
+..
T Consensus 341 ip~ 343 (365)
T 4h5i_A 341 LPL 343 (365)
T ss_dssp CCT
T ss_pred cCC
Confidence 864
No 107
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.82 E-value=2e-18 Score=104.58 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=92.2
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe--CCCeEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH--DDRHIR 78 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~--~d~~i~ 78 (116)
.|.+.|.+++|+| +++++++++.++.|++||+.+++.+..+..+ ...+.+++|+|++. ++++++ .|+.|+
T Consensus 215 ~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 215 GHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNH------NAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCC------SSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred CCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCC------cceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 3678899999999 8899999999999999999998888888877 67899999999864 666665 699999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+||+.+++.+..+. +...+.+++|+|+++++++++
T Consensus 288 i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 288 FWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEe
Confidence 99999999988886 556799999999999999853
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.82 E-value=2.1e-18 Score=105.83 Aligned_cols=104 Identities=19% Similarity=0.299 Sum_probs=91.7
Q ss_pred CCCC-ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 3 YNGT-PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~-v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
|.+. +.++.+. ++++++++.|+.|++||+.+++.+..+.+| ...|.+++|+|++ .+++++.|+.|++||
T Consensus 120 h~~~v~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h------~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 120 HMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLSGH------DGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp CSSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEEC---CCEEEEEcCCCcEEEEECCCCcEEEEEeCC------CcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 4455 4566654 479999999999999999999999999988 6789999999988 899999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEEC--CCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVD--PQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~s~d 116 (116)
+++++.+..+.+|...|.+++|+ ++++++++++.|
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d 226 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 226 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC
Confidence 99999999999999999999998 578899999875
No 109
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.3e-18 Score=106.08 Aligned_cols=113 Identities=12% Similarity=0.160 Sum_probs=91.1
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC---CCceeEEEecCCcC----cC--CCCceeEEE--EcCCCCEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE---TGKPVVRIDSSQFG----VS--GGGGINRVV--CHPTLPLTITA 71 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~---~~~~~~~~~~~~~~----~~--~~~~i~~~~--~~~~~~~~~~~ 71 (116)
|.+.|.+++|+| +++.+++++.|+.|++||+. +++....+..+... .. +...+.++. +++++..++++
T Consensus 110 h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 110 CSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred CCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 678899999999 88999999999999999994 45544433322000 00 134566666 56889999999
Q ss_pred eCCCeEEEEECCCCeEEEEeec--ccccEEEEEECCCCcEEEeeecC
Q psy17133 72 HDDRHIRFFDNVSGKLVHSMVA--HLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 72 ~~d~~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.|+.|++||+++++.+..+.. |...|.+++|+|++++|++++.|
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 235 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR 235 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 9999999999999999999887 78899999999999999999876
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.82 E-value=1.2e-19 Score=109.89 Aligned_cols=95 Identities=8% Similarity=0.039 Sum_probs=80.6
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEE-----EecCCcCcCCCCceeEEEEcC--------CCCEEEEEeCCCeEEEEEC
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVR-----IDSSQFGVSGGGGINRVVCHP--------TLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~d~~i~~~~~ 82 (116)
++.++++++.|+.|++||..+++.... +.+| ...|.+++|+| ++++|++++.|++|++||+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH------~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGH------HNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSC------SSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCC------CCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 567899999999999999987754332 3455 78899999998 7889999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
.++..+..+..|...+.+++|+|++. +|++++.|
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 88888777777888999999999875 78888875
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.81 E-value=8.6e-18 Score=98.42 Aligned_cols=101 Identities=17% Similarity=0.222 Sum_probs=83.7
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
...++|++ + +.|++|. |+.|++||..+++.+..+..+. |...|.+++|+|+++++++++.|+.|++|++++++
T Consensus 28 ~~~l~WS~-~-~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~----~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 28 LNLVDWSS-G-NVLAVAL-DNSVYLWSASSGDILQLLQMEQ----PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp CBCEEECT-T-SEEEEEE-TTEEEEEETTTCCEEEEEECCS----TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEECC-C-CEEEEEe-CCEEEEEECCCCCEEEEEEecC----CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 46689998 4 4666654 8999999999999888776542 15679999999999999999999999999999999
Q ss_pred EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 87 LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 87 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+..+.+|...+..+. +++..+++++.+
T Consensus 101 ~~~~~~~h~~~~~~~~--~~~~~l~s~~~~ 128 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLS--WNSYILSSGSRS 128 (318)
T ss_dssp EEEEEECCSSCEEEEE--EETTEEEEEETT
T ss_pred eEEEecCccceEEEee--cCCCEEEEEecC
Confidence 9999998888776654 456788887754
No 112
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2.2e-18 Score=100.69 Aligned_cols=105 Identities=14% Similarity=0.143 Sum_probs=91.5
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.+++| | +++++++++.++.|++||+.+++....+..+ ...+.+++|+|++..+++++.|+.+++|+
T Consensus 16 ~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 16 GHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTG------QGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp CCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEEC------SSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecC------CccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 47889999999 8 7789999999999999999988888888887 67899999999999999999999999999
Q ss_pred CCCC---eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSG---KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+... +.+..+..|...+.+++| +++++++++.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d 123 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWD 123 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCC
Confidence 8643 556677788999999999 57788888765
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.81 E-value=9e-18 Score=101.07 Aligned_cols=107 Identities=9% Similarity=0.113 Sum_probs=94.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC---CCEEEEEeCCCeEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT---LPLTITAHDDRHIRF 79 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~d~~i~~ 79 (116)
|.+.|.++.|+|+++.++++++.++.+++||+.+++.+..+... ..+..+.+.|. +.++++++.++.|++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE-------ETVYSHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECS-------SCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCC-------CceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence 78899999999966789999999999999999988887777643 57889999985 449999999999999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ 116 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d 116 (116)
||+.+++.+..+..|...+.+++|+|+++ .|++++.|
T Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d 208 (408)
T 4a11_B 171 CDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASAD 208 (408)
T ss_dssp EESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETT
T ss_pred EeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCC
Confidence 99999999888988999999999999998 58888765
No 114
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=2.2e-18 Score=105.66 Aligned_cols=103 Identities=6% Similarity=0.011 Sum_probs=86.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.+++|+|++++++++++.|+.|++||+.++..+....+| ...+.+++|+|+++.+++++.|+.|++||+
T Consensus 148 h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~------~~~v~~v~wspdg~~lasgs~dg~v~iwd~ 221 (434)
T 2oit_A 148 AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPS------TVAVTSVCWSPKGKQLAVGKQNGTVVQYLP 221 (434)
T ss_dssp GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECG------GGCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCC------CCceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence 57889999999955789999999999999999988666566666 568999999999999999999999999999
Q ss_pred CCCeEEEEeecc-------cccEEEEEECCCCcEEEe
Q psy17133 83 VSGKLVHSMVAH-------LDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 83 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~ 112 (116)
+ ++....+..+ ...+.+++|++++.++++
T Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 222 T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred C-CcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 8 5555555432 237899999999888754
No 115
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.80 E-value=7.7e-18 Score=103.36 Aligned_cols=103 Identities=16% Similarity=0.220 Sum_probs=91.5
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...+.++ ++ +++.+++++.++.|++||+.+++.+..+.+| ...+.+++|+|+++.+++++.|+.|++||+
T Consensus 269 ~~~~v~~~--~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 269 HMASVRTV--SG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGH------TDRIYSTIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp CSSCEEEE--EE-ETTEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ccceEEEE--cC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCC------CCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 44555555 45 5689999999999999999999999999888 678999999999999999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++.+..+..|...+.+++|+ +++|++++.|
T Consensus 340 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d 371 (464)
T 3v7d_B 340 ENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD 371 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT
T ss_pred CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC
Confidence 9999999999999999999997 5789998876
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.80 E-value=2.5e-17 Score=100.33 Aligned_cols=105 Identities=16% Similarity=0.246 Sum_probs=92.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|++++|+| ++++|++|+.|+.|++||+.+++.+..+.+| ...+.++.+ ++..+++++.|+.+++|+.
T Consensus 146 ~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h------~~~v~~~s~--~~~~l~sgs~d~~i~~~d~ 216 (420)
T 4gga_A 146 PGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH------SARVGSLSW--NSYILSSGSRSGHIHHHDV 216 (420)
T ss_dssp TTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred CCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeCC------CCceEEEee--CCCEEEEEeCCCceeEeee
Confidence 456799999999 8899999999999999999999999999988 567777766 5679999999999999998
Q ss_pred CCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
... ..+..+..|...+..+.|+|+++++++++.|
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D 251 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND 251 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccceeeEEecccccceeeeeecCCCCeeeeeecc
Confidence 754 4566778899999999999999999998875
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.80 E-value=6.9e-18 Score=109.22 Aligned_cols=108 Identities=17% Similarity=0.250 Sum_probs=93.2
Q ss_pred CCCCCceEEEEccCC--CcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcC-------------C
Q psy17133 2 FYNGTPTSIDFVRDE--STKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHP-------------T 64 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~-------------~ 64 (116)
.|.+.|.++.|+| + ++.+++++.++.|++||+.++. ....+..+ ...+.+++|+| +
T Consensus 97 ~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~------~~~v~~l~~~p~~~~~~~~~~~~~d 169 (753)
T 3jro_A 97 VHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH------AIGVNSASWAPATIEEDGEHNGTKE 169 (753)
T ss_dssp CCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC------SSCEEEEEECCCC---------CGG
T ss_pred CCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC------CCceEEEEecCcccccccccccCCC
Confidence 3678899999999 6 8999999999999999998763 34455666 67899999999 5
Q ss_pred CCEEEEEeCCCeEEEEECCCC----eEEEEeecccccEEEEEECCC---CcEEEeeecC
Q psy17133 65 LPLTITAHDDRHIRFFDNVSG----KLVHSMVAHLDAVTSLAVDPQ---GLYILSGTYQ 116 (116)
Q Consensus 65 ~~~~~~~~~d~~i~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~l~~~s~d 116 (116)
+..+++++.|+.|++||+.++ .....+..|...|.+++|+|+ +++|++++.|
T Consensus 170 ~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp GCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred CCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 899999999999999999876 556677789999999999999 8999999875
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.80 E-value=1.9e-18 Score=104.65 Aligned_cols=114 Identities=9% Similarity=0.079 Sum_probs=77.3
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------CCCCceeEEEEcC--CCCEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------SGGGGINRVVCHP--TLPLT 68 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~--~~~~~ 68 (116)
|...+.++.|++.++..+++++.++.+++||+..++....+..+.... ..........++| ++.++
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 567788999874388999999999999999998776555554432100 0001112233443 34467
Q ss_pred EEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 69 ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 69 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
++++.|+.|++||+.+++.......|...|.+++|+|+|++|++++.|
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp EEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESS
T ss_pred EEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 788899999999999998887777788899999999999999999865
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.78 E-value=6.7e-18 Score=105.76 Aligned_cols=103 Identities=10% Similarity=0.096 Sum_probs=83.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-------eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-------PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI 77 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i 77 (116)
..+.+++|+| ++++|++++.|++|++|++.++. .+..++.+.. +|...|.+++|+|++ +++++.|+.+
T Consensus 130 ~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~--gh~~~V~sVawSPdg--Laass~D~tV 204 (588)
T 2j04_A 130 RTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA--GSKDWVTHIVWYEDV--LVAALSNNSV 204 (588)
T ss_dssp TCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT--TCCCCEEEEEEETTE--EEEEETTCCE
T ss_pred ccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccc--cccccEEEEEEcCCc--EEEEeCCCeE
Confidence 3589999999 89999999999999999998775 2566643321 135689999999999 7888889999
Q ss_pred EEEECCCCeE---EEEee-cccccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNVSGKL---VHSMV-AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++|++..++. .+.+. +|...|.+++|+ ++.|++++
T Consensus 205 rlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 205 FSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp EEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred EEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 9999987763 34553 677889999999 68888876
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.77 E-value=9.1e-17 Score=98.34 Aligned_cols=106 Identities=13% Similarity=0.259 Sum_probs=88.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...+.++.++ ++.+++++.++.|++||+.+++.+..+..+.. |...+.+++++ +.++++++.|+.|++||+
T Consensus 318 ~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 318 HQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNK---HQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp CCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECSTTS---CSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred CcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccCCC---CCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 45667777664 37899999999999999999998888876311 15679999885 579999999999999999
Q ss_pred CCCeEEEEe-----ecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSM-----VAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+ ..+.+.+.+++|+|++.++++++.|
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d 428 (445)
T 2ovr_B 390 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 428 (445)
T ss_dssp TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSS
T ss_pred CCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccC
Confidence 999998887 3577889999999999999998875
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.76 E-value=1.1e-16 Score=97.85 Aligned_cols=101 Identities=15% Similarity=0.278 Sum_probs=88.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|...|.++.| +++++++++.++.|++||..+++.+..+.+| ...|.++++ ++..+++++.|+.|++||+
T Consensus 132 ~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~--~~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 132 TSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGH------TGSVLCLQY--DERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp SCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCC------SSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred CCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCC------CCcEEEEEE--CCCEEEEEcCCCeEEEEEC
Confidence 3455777766 5689999999999999999999999999888 678999888 7889999999999999999
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+..|...+.+++|++ ..+++++.|
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~d 232 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKD 232 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCT--TEEEEEETT
T ss_pred CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCC
Confidence 99999999999999999999974 488888765
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.76 E-value=1.4e-16 Score=97.32 Aligned_cols=102 Identities=20% Similarity=0.289 Sum_probs=90.7
Q ss_pred CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
.|.+.|.++.|. ++.+++++.++.+++||+.+++.+..+.++ ...+.++.+ ++..+++++.|+.|++||
T Consensus 254 ~~~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------~~~v~~~~~--~~~~l~~g~~dg~i~iwd 322 (435)
T 1p22_A 254 GHRAAVNVVDFD---DKYIVSASGDRTIKVWNTSTCEFVRTLNGH------KRGIACLQY--RDRLVVSGSSDNTIRLWD 322 (435)
T ss_dssp CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCcCcEEEEEcCC------CCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 366788889883 489999999999999999999999999888 667888888 468999999999999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+++.+..+..|...+.+++| ++++|++++.|
T Consensus 323 ~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 323 IECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp TTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred CCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence 9999999999999999999998 78899999875
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.76 E-value=2.4e-17 Score=97.97 Aligned_cols=104 Identities=9% Similarity=0.015 Sum_probs=78.3
Q ss_pred CCCceEEEEccCC----CcEEEEeeC--------------------CCeEEEEECC-CCceeEEEecCCcCcCCCCceeE
Q psy17133 4 NGTPTSIDFVRDE----STKMVTAFD--------------------NSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINR 58 (116)
Q Consensus 4 ~~~v~~~~~~~~~----~~~l~~~~~--------------------~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~ 58 (116)
.+.|..++++| + ++.+++++. ++.|++|++. +++.+..+..+ +..+..
T Consensus 111 ~~~v~sla~sp-d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~------~~~v~~ 183 (356)
T 2w18_A 111 IREIRALFCSS-DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLM------PPEETI 183 (356)
T ss_dssp EEEEEEECC-------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEEC------CCSSCE
T ss_pred ccceEEEEECC-CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccC------CCceee
Confidence 34677788888 5 566665442 7788888884 47777777777 557788
Q ss_pred EEEcC---CCCEEEEEeCCCeEEEEECCCCeEEEEeeccc---ccEEEEEECCCCcEEEeee
Q psy17133 59 VVCHP---TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL---DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 59 ~~~~~---~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~s 114 (116)
++|+| ++..+++++.|++|++||+++++.++.+.+|. ..+..++|+|+|+++++++
T Consensus 184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 88888 67899999999999999999999999997543 3567779999999886543
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=3.3e-16 Score=95.56 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=83.8
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCC---eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCC--e
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNS---ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDR--H 76 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~---~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~--~ 76 (116)
|.+.+.+++|+| +++.|++++.++ .|++||+.+++.. .+..+ ...+.+++|+|+++.++ +++.++ .
T Consensus 177 ~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~------~~~~~~~~~spdg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 177 SPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-QVASF------PRHNGAPAFSPDGSKLAFALSKTGSLN 248 (415)
T ss_dssp ESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC------SSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred CCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC------CCcccCEEEcCCCCEEEEEEecCCCce
Confidence 467889999999 788998888664 8999999988764 45555 45789999999999777 565554 5
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
|++||+.+++. ..+..+...+..++|+|+|++|+.++.
T Consensus 249 i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 249 LYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp EEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred EEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEEC
Confidence 99999998876 456667778999999999999987764
No 125
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.74 E-value=6.7e-16 Score=94.53 Aligned_cols=101 Identities=17% Similarity=0.285 Sum_probs=58.7
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
|.+.|.++.|++ +.+++++.++.+++||+.+++.+..+.++ ...+.++.+ ++..+++++.|+.|++||+
T Consensus 198 h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~------~~~v~~~~~--~~~~l~~~~~dg~i~iwd~ 266 (445)
T 2ovr_B 198 HTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGH------VAAVRCVQY--DGRRVVSGAYDFMVKVWDP 266 (445)
T ss_dssp CSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECC------SSCEEEEEE--CSSCEEEEETTSCEEEEEG
T ss_pred CCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCC------cccEEEEEE--CCCEEEEEcCCCEEEEEEC
Confidence 444555555543 44555666666666666655555555555 445555555 4555666666666666666
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
.+++.+..+..|...+.+++| +++++++++.|
T Consensus 267 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 298 (445)
T 2ovr_B 267 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLD 298 (445)
T ss_dssp GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETT
T ss_pred CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCC
Confidence 666666666556566666665 55566655543
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.74 E-value=6.5e-16 Score=94.02 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=89.6
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEE
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFD 81 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~ 81 (116)
|.+.+.++.|+| ++..+++++.++.+++||+.+++.+..+..+ ...+.+++|+|+++.+++ ++.++.|++||
T Consensus 168 ~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 168 KLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLT------GKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp TCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECS------SSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCC------CCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 556789999998 7889999999999999999998888888876 567999999999987754 55799999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+.+++.+..+.. ...+..++|+|+++++++++
T Consensus 241 ~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 241 RKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp TTTTEEEEECCC-CSEEEEEEECTTSSEEEEEE
T ss_pred CCCCcEEEEecC-CCCceEEEEcCCCCEEEEEE
Confidence 999998887764 34589999999999988776
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.72 E-value=2.9e-15 Score=90.16 Aligned_cols=102 Identities=14% Similarity=0.233 Sum_probs=84.0
Q ss_pred CCCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~ 81 (116)
...+.+++|+| +++.+ ++++.++.|++||..+++.+..+..+ ..+.+++|+|+++.++. +..++.|++||
T Consensus 31 ~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 31 GSNPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAG-------SSPQGVAVSPDGKQVYVTNMASSTLSVID 102 (391)
T ss_dssp SSSEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-------SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEECC-------CCccceEECCCCCEEEEEECCCCEEEEEE
Confidence 45688999999 66765 66778999999999999888888766 37999999999997754 55679999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEE-Eeee
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYI-LSGT 114 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~s 114 (116)
+.+++.+..+..+ ..+..++|+|+++.+ ++++
T Consensus 103 ~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 103 TTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp TTTTEEEEEEECS-SSEEEEEECTTSSEEEEEET
T ss_pred CCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeC
Confidence 9999988877744 468999999999987 4554
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.70 E-value=2.8e-16 Score=95.60 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=88.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+.+++|+| ++.++++++.++.|++||..+++.+..+... ....|...+.+++|+|++.++++++.|+.|++||+++
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPE-KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCH-HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcc-cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 4567899999 7788888888999999999988877533210 0011256799999999999999999999999999999
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++.+..+..+...+..++|+|+++.+++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEE
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 999888888888999999999999886544
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.70 E-value=9.4e-15 Score=87.91 Aligned_cols=102 Identities=15% Similarity=0.251 Sum_probs=85.5
Q ss_pred CCCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~ 81 (116)
...+.+++|+| +++.+ ++++.++.|++||+.+++.+..+..+ ..+..++|+|+++.+ ++++.++.|++||
T Consensus 115 ~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 115 GKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-------RSPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp SSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECC-------SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-------CCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 45678999999 66766 67778999999999999888887766 357899999999877 5677889999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+.+++....+. +...+..++|+|++++|++++
T Consensus 187 ~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 187 TVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp TTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEE
T ss_pred CCCCeEEEEEe-cCCCccceEECCCCCEEEEEe
Confidence 99998887776 455789999999999988776
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.69 E-value=4.3e-15 Score=99.03 Aligned_cols=105 Identities=20% Similarity=0.156 Sum_probs=88.4
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC--------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-------- 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-------- 74 (116)
+...+..++|+| +++.|++++.++.+++||+.+++....+..+ ...+..++|+|||+++++++.+
T Consensus 377 ~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~------~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 377 NLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSR------EAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp CCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECS------SSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred CccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCC------CCCccceEECCCCCeEEEEecCccccccCC
Confidence 346788999999 8899999999999999999988877776666 5678999999999988887654
Q ss_pred --CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 75 --RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 75 --~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+.|++||+.+++ ...+..+...+..++|+|+|++|+.++.
T Consensus 450 ~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 389999999887 5666667777889999999999987764
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.66 E-value=3.7e-15 Score=96.00 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=84.6
Q ss_pred CCCceEEEEccCCCcEEEEeeC-CC-----eEEEEECCCCceeEEEecCCcCcCCC----------------------Cc
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFD-NS-----ACVLFDLETGKPVVRIDSSQFGVSGG----------------------GG 55 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~-~~-----~v~i~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 55 (116)
...+.+++|+| ++++|++++. ++ .|++||+.+++....+..+.. . ..
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVV----LPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGT----C--------------------CCEE
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhc----ccccccccchhhhhhhhhhhccccC
Confidence 45689999999 8899998887 77 899999998887666654311 1 23
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEECCCCe--EEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 56 INRVVCHPTLPLTITAHDDRHIRFFDNVSGK--LVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 56 i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+..++|+|||+.+++++. +.|++||+.++. ....+..+...+..++|+|||++|+.++.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~ 171 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG 171 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC
Confidence 788999999999998886 999999998872 33345556678999999999999988764
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.65 E-value=2.8e-14 Score=87.13 Aligned_cols=104 Identities=10% Similarity=0.105 Sum_probs=79.5
Q ss_pred CCCCceEEEEccCCCcEEE-EeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CC--e
Q psy17133 3 YNGTPTSIDFVRDESTKMV-TAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DR--H 76 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~-~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~--~ 76 (116)
+.+.+.+++|+| +++.|+ +++.+ ..|++||+.+++. ..+..+ ...+..++|+|+++.+++++. ++ .
T Consensus 221 ~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~------~~~~~~~~~spdg~~l~~~s~~~g~~~ 292 (415)
T 2hqs_A 221 FPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG------RSNNTEPTWFPDSQNLAFTSDQAGRPQ 292 (415)
T ss_dssp CSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC------SSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred CCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC------CCcccceEECCCCCEEEEEECCCCCcE
Confidence 456788999999 777776 55544 4599999987764 555555 467899999999998888776 34 7
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
|.+||+.+++.. .+..+...+..++|+|+|++|+.++.
T Consensus 293 i~~~d~~~~~~~-~l~~~~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 293 VYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp EEEEETTSSCCE-ECCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred EEEEECCCCCEE-EEecCCCcccCeEECCCCCEEEEEEC
Confidence 888899887653 34445667889999999999987764
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=4.9e-15 Score=85.62 Aligned_cols=107 Identities=15% Similarity=0.136 Sum_probs=82.0
Q ss_pred CCCCceEEEEccCCCcEEEEee-CCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC------
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAF-DNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD------ 74 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d------ 74 (116)
+...+.++.|+| +++.+++++ .++.+.+|++. .+.....+..+ ...+..+.|+|+++.+++++.+
T Consensus 171 ~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 171 GEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS------AYGDWFPHPSPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp SSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCC------SEEEEEEEECTTSSEEEEEEEETTCCSC
T ss_pred CCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecC------CcccCCeEECCCCCEEEEEEcCCCCCcc
Confidence 446788999999 777776655 57888888875 45556666655 4578899999999988877655
Q ss_pred -----CeEEEEECCCCeEEE--EeecccccEEEEEECCCCcEEEeeecC
Q psy17133 75 -----RHIRFFDNVSGKLVH--SMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 75 -----~~i~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
..|.+||+.+++... .+..+...+..++|+|++++|++++.|
T Consensus 244 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred cccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 569999998876543 343567788899999999999887754
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.59 E-value=1.8e-13 Score=86.15 Aligned_cols=96 Identities=19% Similarity=0.136 Sum_probs=82.8
Q ss_pred EEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC--CCCeEE
Q psy17133 11 DFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN--VSGKLV 88 (116)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~--~~~~~~ 88 (116)
.|+| ++..+++++.++.|.+||..+++.+..+... . .+..++++|+++++++++.++.|.+||+ .+++.+
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g------~-~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTG------Y-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECS------T-TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecC------c-ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE
Confidence 3788 6678888889999999999999999888844 2 3789999999999999999999999999 888888
Q ss_pred EEeecccccEEEEEECC----CCcEEEeeec
Q psy17133 89 HSMVAHLDAVTSLAVDP----QGLYILSGTY 115 (116)
Q Consensus 89 ~~~~~~~~~v~~~~~~~----~~~~l~~~s~ 115 (116)
..+. ....+..++|+| +|+++++++.
T Consensus 216 ~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 216 AEIK-IGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEE-CCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred EEEe-cCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 8877 445689999999 9999998763
No 135
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.58 E-value=1.6e-14 Score=91.16 Aligned_cols=100 Identities=13% Similarity=0.074 Sum_probs=80.0
Q ss_pred eEEEEccCCCcEEEEeeCC----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC--eEEEEE
Q psy17133 8 TSIDFVRDESTKMVTAFDN----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR--HIRFFD 81 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~--~i~~~~ 81 (116)
.++.|+| +|++|++++.+ ..|++||+.+++.. .+..+ ...+..++|+|||+.++++..++ .|++||
T Consensus 153 ~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~------~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d 224 (582)
T 3o4h_A 153 FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSG------EGSFSSASISPGMKVTAGLETAREARLVTVD 224 (582)
T ss_dssp CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCS------SCEEEEEEECTTSCEEEEEECSSCEEEEEEC
T ss_pred ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecC------CCccccceECCCCCEEEEccCCCeeEEEEEc
Confidence 6789999 88999877655 77999999877654 56655 46789999999999999888888 899999
Q ss_pred CCCCeEEEEeecccccEEEEE--------ECCCCcEEEeeecC
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLA--------VDPQGLYILSGTYQ 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~s~d 116 (116)
+.+++.. .+..+...+..++ |+|||.++++++.|
T Consensus 225 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 225 PRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp TTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred CCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 9988877 6666665566666 99999887777653
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.57 E-value=5e-14 Score=90.57 Aligned_cols=104 Identities=11% Similarity=0.170 Sum_probs=78.9
Q ss_pred CceEEEEccCCCcEEEEeeCC---------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 6 TPTSIDFVRDESTKMVTAFDN---------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~---------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
.+.+++|+| ++++|++++.+ +.+++||+.+++. ..+..... +...+..++|+|||+.++.++. +.
T Consensus 62 ~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~---~~~~~~~~~~SPdG~~la~~~~-~~ 135 (723)
T 1xfd_A 62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEV---SNAKLQYAGWGPKGQQLIFIFE-NN 135 (723)
T ss_dssp TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTC---CSCCCSBCCBCSSTTCEEEEET-TE
T ss_pred ccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCcc---ccccccccEECCCCCEEEEEEC-Ce
Confidence 488999999 88988888753 7888999988765 34433210 1334788999999999998876 79
Q ss_pred EEEEECCCCeEEEEeeccccc------------------EEEEEECCCCcEEEeeec
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDA------------------VTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~l~~~s~ 115 (116)
|++|++.+++..+....+... +..++|+|||++|++++.
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 999999988876665543322 278999999999998764
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=2.9e-13 Score=78.19 Aligned_cols=104 Identities=8% Similarity=0.071 Sum_probs=77.8
Q ss_pred CCceEEEEccCCCcEEE-EeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMV-TAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFD 81 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~-~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~ 81 (116)
..+..+.|+| +++.++ ++..++.+.+|++. .......+..+ ...+..+.|+|+++.++.++ .++.+.+|+
T Consensus 129 ~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~ 201 (297)
T 2ojh_A 129 LPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG------EGRNDGPDYSPDGRWIYFNSSRTGQMQIWR 201 (297)
T ss_dssp SSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCS------SSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred CCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccC------CCccccceECCCCCEEEEEecCCCCccEEE
Confidence 4477889999 667665 67788988888853 22334455444 46789999999999777665 588899998
Q ss_pred CC-CCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 82 NV-SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 82 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+. .+.....+..+...+..++|+|++++|+.++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 202 VRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp EETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred ECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 75 45556667667778899999999999987654
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.57 E-value=5.2e-13 Score=78.76 Aligned_cols=101 Identities=13% Similarity=0.188 Sum_probs=76.4
Q ss_pred CCceEEEEccCCCcEEEEee-CCCeEEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-C--eEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-R--HIRF 79 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~--~i~~ 79 (116)
..+ .++|+| +++.+++++ .++.+.+||..+++. ...+..+ .....+++++|+++.+++...+ + .|.+
T Consensus 41 ~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v 112 (331)
T 3u4y_A 41 DFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG------QSSMADVDITPDDQFAVTVTGLNHPFNMQS 112 (331)
T ss_dssp CEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC------SSCCCCEEECTTSSEEEECCCSSSSCEEEE
T ss_pred Ccc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccC------CCCccceEECCCCCEEEEecCCCCcccEEE
Confidence 345 899999 667665555 488999999998886 6666555 3344449999999988855555 3 9999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
||+.+++.+..+.. ......++|+|+|+++++++
T Consensus 113 ~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 113 YSFLKNKFISTIPI-PYDAVGIAISPNGNGLILID 146 (331)
T ss_dssp EETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEE
T ss_pred EECCCCCeEEEEEC-CCCccceEECCCCCEEEEEe
Confidence 99999998887764 34578999999998766543
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.56 E-value=7.3e-13 Score=78.56 Aligned_cols=101 Identities=11% Similarity=0.042 Sum_probs=82.4
Q ss_pred ceEEEEccCCCcEEEEee--CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 7 PTSIDFVRDESTKMVTAF--DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+.++.|+| +++.++++. .++.|.+||..+++.+..+... ...+..+.++|+++.+++++.++.+.+||..+
T Consensus 143 ~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~ 215 (353)
T 3vgz_A 143 PRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT------GKMSTGLALDSEGKRLYTTNADGELITIDTAD 215 (353)
T ss_dssp EEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCC------CTTCCCCEEETTTTEEEEECTTSEEEEEETTT
T ss_pred CceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCC------CCccceEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 67899999 667666654 4788999999999888887744 33578899999999999999999999999999
Q ss_pred CeEEEEeec----ccccEEEEEECCCCcEEEeee
Q psy17133 85 GKLVHSMVA----HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 85 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~s 114 (116)
++.+..+.. +...+..++|+|++++++.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 216 NKILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 998877653 344678899999999877654
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.56 E-value=5.7e-14 Score=90.56 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=78.4
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+.+++|+| ++++|++++. +.|++||+.++. ....+..+ ...+..++|+|||+.++.++ ++.|++||+.+
T Consensus 111 v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~------~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 111 IVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG------EGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp SCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCS------SSCEEEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred cceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccC------CcccccccCCCCCCEEEEEe-CCcEEEEecCC
Confidence 78899999 8898888875 899999998772 34445544 45789999999999998887 46999999998
Q ss_pred CeEEEEeeccccc----------------EEEEEECCCCcEEEeeec
Q psy17133 85 GKLVHSMVAHLDA----------------VTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 85 ~~~~~~~~~~~~~----------------v~~~~~~~~~~~l~~~s~ 115 (116)
++.......+... +..++|+|||++|++++.
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 8776554433221 467999999999988754
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.53 E-value=3.8e-12 Score=75.47 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=78.5
Q ss_pred CCCceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~ 81 (116)
...+..+.|+| +++.++++. .++.+.+||..+++.+..+... . ...+.|+|+++.++.+. .++.|.+||
T Consensus 230 ~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~------~--~~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 230 EHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNILAKVAAP------E--SLAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp CCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCEEEEEECS------S--CCCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC------C--CceEEECCCCCEEEEEECCCCeEEEEE
Confidence 34567799999 667665554 5689999999999888877754 2 25689999998665554 689999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
..+++.+..+.. ...+..++|+|++++|+.+.
T Consensus 301 ~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 301 AKSYKVVKTFDT-PTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp TTTTEEEEEEEC-CSEEEEEEECTTSCEEEEEE
T ss_pred CCCCeEEEEEec-CCCCCeEEEcCCCCEEEEEE
Confidence 999998887764 34688999999999776554
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.53 E-value=2.6e-12 Score=80.98 Aligned_cols=99 Identities=9% Similarity=0.016 Sum_probs=82.4
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEEC--CCCceeEEEecCCcCcCCCCceeEEEEcC----CCCEEEEEeC-CCeEEE
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDL--ETGKPVVRIDSSQFGVSGGGGINRVVCHP----TLPLTITAHD-DRHIRF 79 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~-d~~i~~ 79 (116)
+..+.|+| +++++++++.++.|++||+ .+++.+..+... ..+..++|+| +++++++++. ++.|.+
T Consensus 181 ~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v 252 (543)
T 1nir_A 181 VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-------IEARSVESSKFKGYEDRYTIAGAYWPPQFAI 252 (543)
T ss_dssp EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-------SEEEEEEECCSTTCTTTEEEEEEEESSEEEE
T ss_pred cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-------CCcceEEeCCCcCCCCCEEEEEEccCCeEEE
Confidence 67889999 8899999999999999999 788888888754 4578999999 9999988874 899999
Q ss_pred EECCCCeEEEEeecc-----------cccEEEEEECCCCcEEEee
Q psy17133 80 FDNVSGKLVHSMVAH-----------LDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~ 113 (116)
||..+++.+..+..+ ...+..+.++|+++.++..
T Consensus 253 ~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 253 MDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp EETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred EeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 999999998877632 2268899999987766543
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.53 E-value=1.5e-13 Score=88.27 Aligned_cols=110 Identities=12% Similarity=0.062 Sum_probs=79.4
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-----CceeEEEecCCcC--------cCCCCceeEEEEcCCCCEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-----GKPVVRIDSSQFG--------VSGGGGINRVVCHPTLPLTIT 70 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-----~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~ 70 (116)
.+.+.+++|+| +++.++++ .++.|++|++.+ ++........... ..+...+..+.|+|||+.|++
T Consensus 120 ~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 120 NEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp TTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred cccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence 45678899999 78888885 578999999987 6654433322100 000112578999999999988
Q ss_pred Ee---------------------------------CCCeEEEEECCCCeEEEEee--cccccEEEEEECCCCcEEEeeec
Q psy17133 71 AH---------------------------------DDRHIRFFDNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 71 ~~---------------------------------~d~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
++ .+..|++||+.+++...... .+...+..++|+|||++|++++.
T Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 277 (706)
T 2z3z_A 198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV 277 (706)
T ss_dssp EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence 87 44679999999888655442 35567899999999999887653
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.53 E-value=2e-13 Score=87.77 Aligned_cols=107 Identities=7% Similarity=-0.074 Sum_probs=77.6
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc---CC---------CCceeEEEEcCCCCEEEEEeC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV---SG---------GGGINRVVCHPTLPLTITAHD 73 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~---~~---------~~~i~~~~~~~~~~~~~~~~~ 73 (116)
.+..+.|+| +++.|++++. +.|++|+..+++.......+.... ++ ...+..+.|+|||+.|++++.
T Consensus 115 ~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 115 KLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred cccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 477899999 7888888875 799999999877665554431100 00 012378999999999888765
Q ss_pred CC----------------------------------eEEEEECCCCeEEEEeecc------cccEEEEEECCCCcEEEee
Q psy17133 74 DR----------------------------------HIRFFDNVSGKLVHSMVAH------LDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 74 d~----------------------------------~i~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~ 113 (116)
+. .|++||+.+++....+..+ ...+..++|+|||+++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE
Confidence 42 7999999988765555533 5578899999999988665
Q ss_pred e
Q psy17133 114 T 114 (116)
Q Consensus 114 s 114 (116)
+
T Consensus 273 ~ 273 (723)
T 1xfd_A 273 L 273 (723)
T ss_dssp E
T ss_pred E
Confidence 3
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.53 E-value=2.7e-13 Score=90.56 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=83.5
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEE-EEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACV-LFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~-i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
.+..+.|+ +++.+++++.+..+. +|+..+++. ..+..+ ...+..++|+|+++.+++++.++.+++||+.+
T Consensus 339 ~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~-~~l~~~------~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t 409 (1045)
T 1k32_A 339 RYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKA-EKFEEN------LGNVFAMGVDRNGKFAVVANDRFEIMTVDLET 409 (1045)
T ss_dssp EEEEECSS--SEEEEEEEETTEEEEEEEETTTCCE-EECCCC------CCSEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred eEEeeeEc--CCCeEEEEECCCceEEEEECCCCCc-eEecCC------ccceeeeEECCCCCEEEEECCCCeEEEEECCC
Confidence 67788888 567788777777888 899886654 344444 46789999999999999999999999999999
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
++.......+...+..++|+|||++|++++.
T Consensus 410 g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 410 GKPTVIERSREAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp CCEEEEEECSSSCCCCEEECTTSCEEEEEEE
T ss_pred CceEEeccCCCCCccceEECCCCCeEEEEec
Confidence 9888777678888899999999999987653
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.52 E-value=8.6e-14 Score=89.59 Aligned_cols=101 Identities=11% Similarity=0.137 Sum_probs=75.4
Q ss_pred CceEEEEccCCCcEEEEeeC---------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 6 TPTSIDFVRDESTKMVTAFD---------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~---------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
.+.+++|+| ++++|++++. ++.+++||+.+++.+..... ...+..++|+|||+.++.+. ++.
T Consensus 61 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-------~~~~~~~~~SPDG~~la~~~-~~~ 131 (719)
T 1z68_A 61 NASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-------PRPIQYLCWSPVGSKLAYVY-QNN 131 (719)
T ss_dssp TCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-------CSSBCCEEECSSTTCEEEEE-TTE
T ss_pred ceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-------CcccccceECCCCCEEEEEE-CCe
Confidence 378999999 8898888765 68999999988765211111 13478899999999998885 789
Q ss_pred EEEEECCCCeEEEEee-cccccE-----------------EEEEECCCCcEEEeeec
Q psy17133 77 IRFFDNVSGKLVHSMV-AHLDAV-----------------TSLAVDPQGLYILSGTY 115 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~-~~~~~v-----------------~~~~~~~~~~~l~~~s~ 115 (116)
|++|++.+++..+... ++...+ ..++|+|||++|++++.
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 9999998887654332 222212 47999999999998764
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.52 E-value=8.4e-13 Score=77.90 Aligned_cols=103 Identities=8% Similarity=0.111 Sum_probs=76.0
Q ss_pred CCCCceEEEEccCCCcEEEEeeCC-CeEEEEECC--CCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCe
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDN-SACVLFDLE--TGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRH 76 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~-~~v~i~~~~--~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~ 76 (116)
+.+.+.+++|+| +++++++++.+ +.+.+|++. +++ .+..+... ..+..++|+|+++.+++++ .++.
T Consensus 36 ~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~~ 107 (343)
T 1ri6_A 36 VPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-------GSLTHISTDHQGQFVFVGSYNAGN 107 (343)
T ss_dssp CSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-------SCCSEEEECTTSSEEEEEETTTTE
T ss_pred cCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-------CCCcEEEEcCCCCEEEEEecCCCe
Confidence 456788999999 77878777765 899999987 454 23344443 3678999999999776665 4889
Q ss_pred EEEEECC---CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 77 IRFFDNV---SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 i~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
|.+|++. +.+....+.. ...+..++|+|+++++++++
T Consensus 108 i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp EEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEE
T ss_pred EEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEec
Confidence 9999994 3444444443 34588899999999887765
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=2e-12 Score=77.29 Aligned_cols=106 Identities=13% Similarity=0.194 Sum_probs=74.7
Q ss_pred CCceEEEEccCCCcEEEEee-CCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRF 79 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~ 79 (116)
..+..+.|+| ++++++++. .++.|.+|++.+++. +..+..... +......++|+|++++++++.. ++.|.+
T Consensus 211 ~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~---~~~~~~~i~~spdg~~l~v~~~~~~~~i~v 286 (361)
T 3scy_A 211 SGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV---NAQGSGDIHLSPDGKYLYASNRLKADGVAI 286 (361)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS---CCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred CCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC---CCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence 4467899999 778776666 689999999986643 223322210 0234679999999998866655 489999
Q ss_pred EECC--CCeE--EEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 80 FDNV--SGKL--VHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 80 ~~~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
|++. +++. +..+.. ...+..++|+|+|++|++++.
T Consensus 287 ~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 287 FKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred EEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 9985 4553 333433 456789999999999888763
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.51 E-value=6.9e-13 Score=78.48 Aligned_cols=100 Identities=11% Similarity=0.016 Sum_probs=78.5
Q ss_pred EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCCeEEEEECCCCeE
Q psy17133 9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~~~~~~~~~ 87 (116)
.+++++ ++..+++++.++.|++||..+++.+..+.... ...+..++++|+++.++ +...++.|.+||+.+++.
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-----KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSS-----CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCC-----CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 445677 77888999999999999999998888776551 12477899999998654 555689999999999988
Q ss_pred EEEeeccc------ccEEEEEECCCCcEEEeee
Q psy17133 88 VHSMVAHL------DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 88 ~~~~~~~~------~~v~~~~~~~~~~~l~~~s 114 (116)
+..+.... ..+..++|+|+|+++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATV 110 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEc
Confidence 77665322 2367899999999998876
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.51 E-value=1.2e-12 Score=77.07 Aligned_cols=105 Identities=18% Similarity=0.102 Sum_probs=79.5
Q ss_pred CceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe------------
Q psy17133 6 TPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH------------ 72 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------ 72 (116)
.+..++|+| +++.+ +++..++.|.+||..+++.+..+...... .+...+..++++|+++.++++.
T Consensus 35 ~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 35 TPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE-ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT-EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc-cccccccceEECCCCCEEEEEecccccccccccc
Confidence 478899999 66555 55566889999999988887777643100 0012467899999999888875
Q ss_pred CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.++.|.+||+.+++.+..+.. ...+..++|+|++++|+++
T Consensus 113 ~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 113 QPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp CCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE
T ss_pred cCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe
Confidence 579999999999988877764 4457789999999987765
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.49 E-value=1.8e-12 Score=76.52 Aligned_cols=102 Identities=16% Similarity=0.185 Sum_probs=74.0
Q ss_pred CCceEEEEccCCCcEEEEee-CCCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRF 79 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~ 79 (116)
+.+..++|+| +++.+++++ .++.+.+|++.++ +.+..+... ..+..++|+|+++.+++++ .++.|.+
T Consensus 84 ~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~~v~~ 155 (343)
T 1ri6_A 84 GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-------DGCHSANISPDNRTLWVPALKQDRICL 155 (343)
T ss_dssp SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-------TTBCCCEECTTSSEEEEEEGGGTEEEE
T ss_pred CCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCC-------CCceEEEECCCCCEEEEecCCCCEEEE
Confidence 4678899999 777676555 5889999999433 334444433 3588899999999887776 8999999
Q ss_pred EECCC-CeEEE----Eeec-ccccEEEEEECCCCcEEEeee
Q psy17133 80 FDNVS-GKLVH----SMVA-HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 80 ~~~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~s 114 (116)
|++.+ ++... .... ....+..++|+|++++++.++
T Consensus 156 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 156 FTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp EEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred EEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence 99987 65432 2222 234688899999999776554
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.48 E-value=6.6e-13 Score=85.33 Aligned_cols=99 Identities=8% Similarity=-0.046 Sum_probs=75.0
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+.+++|+| + ..++.+. ++.+++||+.+++.... ..+ ...+..++|+|||+.+++. .++.|++|++.+
T Consensus 82 ~~v~~~~~sp-d-~~~~~~~-~~~i~~~d~~~~~~~~l-~~~------~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAG-R-GLVVLFT-QGGLVGFDMLARKVTYL-FDT------NEETASLDFSPVGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETT-T-TEEEEEE-TTEEEEEETTTTEEEEE-ECC------TTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred cCceeEEECC-C-CeEEEEE-CCEEEEEECCCCceEEc-cCC------cccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence 4689999999 5 5555544 58999999987765443 333 3467889999999998885 679999999998
Q ss_pred -----CeEEEEeeccccc--------------EEEEEECCCCcEEEeee
Q psy17133 85 -----GKLVHSMVAHLDA--------------VTSLAVDPQGLYILSGT 114 (116)
Q Consensus 85 -----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~s 114 (116)
++.......+... +..+.|+|||++|++++
T Consensus 151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 7766544433332 47899999999999876
No 153
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.47 E-value=1.5e-12 Score=83.12 Aligned_cols=104 Identities=10% Similarity=0.019 Sum_probs=77.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCC----------CeEEEEECCC------CceeEEEe-cCCcCcCCCCceeEEEEcCCCC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDN----------SACVLFDLET------GKPVVRID-SSQFGVSGGGGINRVVCHPTLP 66 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~----------~~v~i~~~~~------~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~ 66 (116)
...+..++|+| +++.|++++.+ ..|++|++.+ ++ ...+. .+ ...+..++|+|||+
T Consensus 129 ~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~------~~~~~~~~~SpDG~ 200 (662)
T 3azo_A 129 GLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDA------HRFVTGPRLSPDGR 200 (662)
T ss_dssp CEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSC------SSEECCCEECTTSS
T ss_pred CccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecC------CCcccCceECCCCC
Confidence 44678899999 78888887765 5799999986 44 44444 33 34677899999999
Q ss_pred EEEEEeCC--------CeEEEEECC-CC---eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 67 LTITAHDD--------RHIRFFDNV-SG---KLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 67 ~~~~~~~d--------~~i~~~~~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.|+..+.+ ..|++||+. ++ +.......+...+..+.|+|||++++++..
T Consensus 201 ~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 201 QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT
T ss_pred EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC
Confidence 99877654 479999998 57 444444445678899999999996666543
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.47 E-value=4.5e-12 Score=74.77 Aligned_cols=97 Identities=8% Similarity=0.067 Sum_probs=71.6
Q ss_pred EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEECCCCeE-
Q psy17133 10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDNVSGKL- 87 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~~~~~~- 87 (116)
..|.++....+++...++.|.+||..+++.+..+... ...+ .++++|+++.+++++. ++.|.+||..+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~------~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG------YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC------CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc------CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 3455534445677778999999999999887777755 3445 9999999996666555 89999999998887
Q ss_pred EEEeecccccEEEEEECCCCcEEEee
Q psy17133 88 VHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
...+..+.....+++|+|++++++++
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~ 101 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTV 101 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEEC
T ss_pred EEecccCCCCccceEECCCCCEEEEe
Confidence 66666555544449999999998844
No 155
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.47 E-value=2e-12 Score=83.84 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=79.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---------C
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---------R 75 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---------~ 75 (116)
....++.|+| ++++++++ ++.|++||+.+++....+..+... ........+.|+|||+.++.++.+ +
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD-EFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT-TCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhh-hhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 3467899999 77777775 899999999999887777766320 001123458899999999888775 5
Q ss_pred eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 76 HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.+.+||+.+++... +..+...+...+|||||+.|+.++
T Consensus 93 ~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~ 130 (740)
T 4a5s_A 93 SYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW 130 (740)
T ss_dssp EEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE
T ss_pred EEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE
Confidence 67799999887654 555667899999999999998764
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.46 E-value=9.3e-13 Score=83.18 Aligned_cols=99 Identities=15% Similarity=0.100 Sum_probs=78.2
Q ss_pred CCCCceEEEEccCCCcEEEEeeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEE--------EcCCCCEEEEEe
Q psy17133 3 YNGTPTSIDFVRDESTKMVTAFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVV--------CHPTLPLTITAH 72 (116)
Q Consensus 3 ~~~~v~~~~~~~~~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~ 72 (116)
+.+.+..+.|+| +++.|+++..++ .|++||+.+++.. .+..+ ...+..+. |+|||.++++++
T Consensus 193 ~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~spdg~~~~~~~ 264 (582)
T 3o4h_A 193 GEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELP------SKDFSSYRPTAITWLGYLPDGRLAVVAR 264 (582)
T ss_dssp SSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS------CSHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred CCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC------CcChhhhhhccccceeEcCCCcEEEEEE
Confidence 456678999999 888888777777 8999999988766 55555 33455555 999998889999
Q ss_pred CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.++.+++|++ ++.+. ...+.+..++|+ +++++++++.
T Consensus 265 ~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 265 REGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp ETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred cCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcC
Confidence 9999999999 66554 234678899999 9998887664
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.45 E-value=2.9e-11 Score=71.85 Aligned_cols=109 Identities=11% Similarity=0.157 Sum_probs=74.0
Q ss_pred CceEEEEccCCCcEEEE-eeCCCeEEEEECCC--Cce--eEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEE
Q psy17133 6 TPTSIDFVRDESTKMVT-AFDNSACVLFDLET--GKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRF 79 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~-~~~~~~v~i~~~~~--~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~ 79 (116)
.+..++|+| +++++++ ...++.+.+|++.. ++. +..+............+..++|+|+|+++ ++...++.|.+
T Consensus 188 ~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v 266 (347)
T 3hfq_A 188 GPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAV 266 (347)
T ss_dssp CEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEE
T ss_pred CCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEE
Confidence 567799999 7775555 55688999998863 432 22333221100001347889999999977 45566899999
Q ss_pred EECCC-C--eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 80 FDNVS-G--KLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 80 ~~~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
|++.. + +.+..+..+...+..++|+|++++|++++.
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 267 FAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred EEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 99862 2 444445544556889999999999887764
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.45 E-value=2.1e-11 Score=72.90 Aligned_cols=102 Identities=9% Similarity=0.205 Sum_probs=70.7
Q ss_pred ceEEEEccCCCcEEEEee-CCCeEEEEECCCCce------e------EEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-
Q psy17133 7 PTSIDFVRDESTKMVTAF-DNSACVLFDLETGKP------V------VRIDSSQFGVSGGGGINRVVCHPTLPLTITAH- 72 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~------~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 72 (116)
+.++.|+| ++++++++. .++.+.+|++..... + ....... ...+..++|+|+++++++++
T Consensus 157 ~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~v~~~ 230 (361)
T 3scy_A 157 LHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-----GSGPRHLIFNSDGKFAYLINE 230 (361)
T ss_dssp EEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-----TCCEEEEEECTTSSEEEEEET
T ss_pred ceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC-----CCCCeEEEEcCCCCEEEEEcC
Confidence 46799999 777665554 578999998864331 1 1222211 34578899999999887776
Q ss_pred CCCeEEEEECCCCeEE--EEee---cccccEEEEEECCCCcEEEeee
Q psy17133 73 DDRHIRFFDNVSGKLV--HSMV---AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~--~~~~---~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.++.|.+|++.+++.. ..+. .+......++|+|+|++|+++.
T Consensus 231 ~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~ 277 (361)
T 3scy_A 231 IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN 277 (361)
T ss_dssp TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE
T ss_pred CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC
Confidence 6899999999877553 2222 1223467999999999987654
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.45 E-value=3.4e-11 Score=71.58 Aligned_cols=110 Identities=14% Similarity=0.216 Sum_probs=74.0
Q ss_pred CCCceEEEEccCCCcEEEEee-CCCeEEEEECC-CCc--eeEEEecCCcC---cCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLE-TGK--PVVRIDSSQFG---VSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~-~~~--~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
...+..++|+| ++++|++++ .++.+.+|++. ++. .+..+...... ......+..++|+|+++++++...++.
T Consensus 85 ~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~ 163 (347)
T 3hfq_A 85 GTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDK 163 (347)
T ss_dssp SCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTE
T ss_pred CCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCE
Confidence 45678899999 778777776 68899999986 332 23333221100 001234788999999996666667899
Q ss_pred EEEEECC-CCeEEEE--eec-ccccEEEEEECCCCcEEEeee
Q psy17133 77 IRFFDNV-SGKLVHS--MVA-HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 i~~~~~~-~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~s 114 (116)
|.+|++. +++.... +.. ....+..++|+|+|++++.++
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 205 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG 205 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe
Confidence 9999998 5554322 222 223678899999999776643
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.44 E-value=2.2e-11 Score=71.70 Aligned_cols=105 Identities=14% Similarity=0.080 Sum_probs=77.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC--cCc--------------------------------
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ--FGV-------------------------------- 50 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~--~~~-------------------------------- 50 (116)
..+.++.|+| ++++++++ ++.+++||..+++.+..+.... ...
T Consensus 135 ~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 211 (337)
T 1pby_B 135 RQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDP 211 (337)
T ss_dssp SSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCT
T ss_pred CCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccc
Confidence 4567889999 77777776 5789999998887666554332 000
Q ss_pred --------------------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEEC
Q psy17133 51 --------------------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVD 104 (116)
Q Consensus 51 --------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 104 (116)
.+...+..++|+|+++.++++ ++.|.+||+.+++.+..+.. ...+..++|+
T Consensus 212 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s 288 (337)
T 1pby_B 212 ADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVS 288 (337)
T ss_dssp TSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEEC
T ss_pred ccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEEC
Confidence 001124468999999988887 68999999999988877763 3457899999
Q ss_pred CCCcEEEeeec
Q psy17133 105 PQGLYILSGTY 115 (116)
Q Consensus 105 ~~~~~l~~~s~ 115 (116)
|++++|++++.
T Consensus 289 ~dg~~l~~~~~ 299 (337)
T 1pby_B 289 TDGSTVWLGGA 299 (337)
T ss_dssp TTSCEEEEESB
T ss_pred CCCCEEEEEcC
Confidence 99998887654
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.43 E-value=1.5e-11 Score=73.94 Aligned_cols=89 Identities=18% Similarity=0.253 Sum_probs=74.2
Q ss_pred EEEccCCCcEEEEeeC-----------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 10 IDFVRDESTKMVTAFD-----------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~-----------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
+.|+| +++.++++.. ...|.+||..+++.+..+..+ . +..++++|+++++++++. +.|.
T Consensus 259 ~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~------~--p~~ia~spdg~~l~v~n~-~~v~ 328 (361)
T 2oiz_A 259 VGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR------D--ALSMTIDQQRNLMLTLDG-GNVN 328 (361)
T ss_dssp EEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT------T--CCEEEEETTTTEEEEECS-SCEE
T ss_pred EEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC------C--eeEEEECCCCCEEEEeCC-CeEE
Confidence 68888 5566655432 348999999999999999877 4 899999999999998887 9999
Q ss_pred EEECCCC--eEEEEeecccccEEEEEECCCCc
Q psy17133 79 FFDNVSG--KLVHSMVAHLDAVTSLAVDPQGL 108 (116)
Q Consensus 79 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~ 108 (116)
+||..++ +.+..+.........++++|+|+
T Consensus 329 v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 329 VYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9999999 88888755666788999999986
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.42 E-value=6.5e-13 Score=85.56 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=74.7
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---------CCeEE
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------DRHIR 78 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------d~~i~ 78 (116)
.++.|+| ++++++ .+.++.+++||..+++....+..+... ...+..++|+|||+.+++++. ++.|+
T Consensus 19 ~~~~~s~-dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 19 FFPNWIS-GQEYLH-QSADNNIVLYNIETGQSYTILSNRTMK---SVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCCEESS-SSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHH---TTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CccEECC-CCeEEE-EcCCCCEEEEEcCCCcEEEEEcccccc---ccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 4789999 665554 446899999999988877666554100 013889999999999988776 68999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+||+.+++.+.... ....+..++|+|||+.|+.++
T Consensus 94 ~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~ 128 (719)
T 1z68_A 94 IYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY 128 (719)
T ss_dssp EEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE
T ss_pred EEECCCCcccccee-cCcccccceECCCCCEEEEEE
Confidence 99999887621111 124578899999999998765
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.40 E-value=1.2e-11 Score=73.15 Aligned_cols=106 Identities=13% Similarity=0.112 Sum_probs=74.4
Q ss_pred CceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133 6 TPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---------- 74 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---------- 74 (116)
.+..+.|+| +++.+ ++...++.|.+||..+++.+..+............+..++++|+++.+++++.+
T Consensus 44 ~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccccc
Confidence 578899999 66655 455578999999999888777776431000000136789999999999888755
Q ss_pred --CeEEEEECCCCeE---EEEeecccccEEEEEECCCCcEEEeee
Q psy17133 75 --RHIRFFDNVSGKL---VHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 75 --~~i~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+.|.+||+.+++. +..+. +...+.+++|+|+++ ++.++
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~ 165 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG 165 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES
T ss_pred CCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc
Confidence 8999999987443 33333 333578899999999 54443
No 164
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.38 E-value=1.6e-11 Score=79.30 Aligned_cols=101 Identities=5% Similarity=0.026 Sum_probs=73.3
Q ss_pred CceEEEEccCCCcEEEEeeCC-C----eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe----
Q psy17133 6 TPTSIDFVRDESTKMVTAFDN-S----ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH---- 76 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~-~----~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~---- 76 (116)
.+..+.|+| ++++|+.+... + .|++||+.+++.+...... ..+..++|+||++.++.+..+..
T Consensus 126 ~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-------~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-------VKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-------ECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred EEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-------cccceEEEEeCCCEEEEEEECCccccc
Confidence 467889999 78888766542 2 8999999988766533222 23678999999998888877654
Q ss_pred ------------EEEEECCCCeE--EEEee--cccccEEEEEECCCCcEEEeee
Q psy17133 77 ------------IRFFDNVSGKL--VHSMV--AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 ------------i~~~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~s 114 (116)
|++|++.+++. ...+. .+...+..+.|+|||++|+..+
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 99999987652 22222 2344578899999999988665
No 165
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.37 E-value=5e-12 Score=81.51 Aligned_cols=102 Identities=14% Similarity=0.107 Sum_probs=72.7
Q ss_pred CceEEEEccCCCcEEEEe-----eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe----
Q psy17133 6 TPTSIDFVRDESTKMVTA-----FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH---- 76 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~-----~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~---- 76 (116)
.+..+.|+| ++++|+.+ +.+..|++||+.+++.+. ..+.. ......++|+||++.++..+.+..
T Consensus 122 ~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~----~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 122 SLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIE----GGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBS----CCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred EEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccC----cccccceEEecCCCEEEEEEecCCCCCc
Confidence 477899999 78888743 345689999999887541 11110 112267899999999988887665
Q ss_pred ---------EEEEECCCCe----EEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 77 ---------IRFFDNVSGK----LVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 ---------i~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
|++|++.++. .+.....+...+..+.|+|||++|+..+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEE
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEE
Confidence 9999998775 2322223445788999999999888655
No 166
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.36 E-value=4e-11 Score=71.17 Aligned_cols=97 Identities=12% Similarity=0.067 Sum_probs=71.0
Q ss_pred CceEEEEccCCCcEEEEeeCC---C--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-------
Q psy17133 6 TPTSIDFVRDESTKMVTAFDN---S--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------- 73 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~---~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------- 73 (116)
.+..+.|+| +++.|+..+.+ + .|.+|++.+++........ . +..+.|+|+++.++..+.
T Consensus 60 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-------~-~~~~~wspdg~~l~~~~~~~~~~~~ 130 (347)
T 2gop_A 60 NATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-------N-IRSLEWNEDSRKLLIVGFKRREDED 130 (347)
T ss_dssp SCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-------E-EEEEEECTTSSEEEEEEECCCC---
T ss_pred cCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-------C-ccceeECCCCCEEEEEEccCCCcCC
Confidence 467789999 77888776543 3 4778888877655444433 3 889999999998877653
Q ss_pred --------------------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 74 --------------------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 74 --------------------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
...|.+|++.+++.+..+.. . .+..+.|+|+| ++++++
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~ 188 (347)
T 2gop_A 131 FIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVP 188 (347)
T ss_dssp ------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEE
T ss_pred cEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEe
Confidence 25799999998887444544 3 67889999999 776654
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.36 E-value=9.1e-12 Score=80.81 Aligned_cols=99 Identities=9% Similarity=0.120 Sum_probs=73.3
Q ss_pred eEEEEccCCCcEEEEeeCC---------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133 8 TSIDFVRDESTKMVTAFDN---------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR 78 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~---------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~ 78 (116)
..+.|+| ++++|+.++.+ +.+.+||+.+++.. .+..+ ...+...+|+|||+.|+.+. ++.|+
T Consensus 65 ~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~------~~~~~~~~~SPdG~~la~~~-~~~i~ 135 (740)
T 4a5s_A 65 NDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERI------PNNTQWVTWSPVGHKLAYVW-NNDIY 135 (740)
T ss_dssp CEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCC------CTTEEEEEECSSTTCEEEEE-TTEEE
T ss_pred cceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccC------CCcceeeEECCCCCEEEEEE-CCeEE
Confidence 3478999 78888887764 56779999987643 34444 45789999999999998885 68999
Q ss_pred EEECCCCeEEEEee-cccccE-----------------EEEEECCCCcEEEeeec
Q psy17133 79 FFDNVSGKLVHSMV-AHLDAV-----------------TSLAVDPQGLYILSGTY 115 (116)
Q Consensus 79 ~~~~~~~~~~~~~~-~~~~~v-----------------~~~~~~~~~~~l~~~s~ 115 (116)
+|+..+++..+... ++...+ ..+.|+|||+.|+.++.
T Consensus 136 ~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~ 190 (740)
T 4a5s_A 136 VKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF 190 (740)
T ss_dssp EESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred EEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEE
Confidence 99998887654322 222222 34899999999998754
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.36 E-value=7.1e-11 Score=70.93 Aligned_cols=107 Identities=20% Similarity=0.221 Sum_probs=73.5
Q ss_pred CceEEEEccCCCcE--EEEee-------------CCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE
Q psy17133 6 TPTSIDFVRDESTK--MVTAF-------------DNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI 69 (116)
Q Consensus 6 ~v~~~~~~~~~~~~--l~~~~-------------~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 69 (116)
.+..+.|+| ++++ ++++. .++.+.+|++. +++....+.... ..+...+..++|+|+|++++
T Consensus 84 ~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 84 HPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE--YQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp SGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE--CCTTCCEEEEEECTTSSEEE
T ss_pred CCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE--eCCCCcceEEEECCCCCEEE
Confidence 356678899 6774 44553 68899999997 465443333100 00035689999999999887
Q ss_pred EEe-CCCeEEEEECC-CCeEEE--Eee--cccccEEEEEECCCCcEEEeeec
Q psy17133 70 TAH-DDRHIRFFDNV-SGKLVH--SMV--AHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 70 ~~~-~d~~i~~~~~~-~~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
++. .++.|.+|++. +++... .+. .+...+..++|+|+|+++++++.
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 765 46899999998 676532 232 12456899999999999887653
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.32 E-value=8.8e-11 Score=70.60 Aligned_cols=96 Identities=14% Similarity=0.070 Sum_probs=71.9
Q ss_pred EEEccCCCcEEEEeeC-CC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 10 IDFVRDESTKMVTAFD-NS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~-~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
..|+| +++.|+..+. ++ .+.+||+.+++.......+ ...+....|+|+++.|+....++.+++||+.+++
T Consensus 41 ~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~------~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGR------GDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp CCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSS------CBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCC------CCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 67999 7888877775 55 4888999887765555444 3344467899999999999999999999999998
Q ss_pred EEEEeecccccEEEE--EECCCCcEEEe
Q psy17133 87 LVHSMVAHLDAVTSL--AVDPQGLYILS 112 (116)
Q Consensus 87 ~~~~~~~~~~~v~~~--~~~~~~~~l~~ 112 (116)
.......+...+... .++|+++.++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVG 141 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred ceeeeechhhcccccceeECCCCCeecc
Confidence 776666555544333 34899998863
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=4.4e-11 Score=71.82 Aligned_cols=103 Identities=16% Similarity=0.160 Sum_probs=73.0
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCE--EEEEe---------
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL--TITAH--------- 72 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~--------- 72 (116)
..+..++|+| ++++|++++.+ .+.+|++. +++......... .+.+..++++|+++. ++++.
T Consensus 40 ~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~-----~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI-----GGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC-----CSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeec-----CCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 3678899999 78888888877 99999987 676543332110 123456889999984 44543
Q ss_pred ----CCCeEEEEECC-CCeEEEEee----cccccEEEEEECCCCcEEEeee
Q psy17133 73 ----DDRHIRFFDNV-SGKLVHSMV----AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 73 ----~d~~i~~~~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.++.+.+|++. .++....+. .+...+..++|+|+|++++++.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 68999999997 466544333 2345789999999999887654
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.31 E-value=1.1e-09 Score=64.83 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=78.0
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----CeEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD----RHIRFF 80 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d----~~i~~~ 80 (116)
..+.++.|+| ++++++++..++.|.+||..+++........ ...+.+++++|+++++++...+ +.|.+|
T Consensus 45 ~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 45 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSH------KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECS------SSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred ccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCC------CCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 4567899998 7787777778899999999877655444333 3568999999999988877666 689999
Q ss_pred ECCCCeEEEEee--cccccEEEEEECCCCcEEEeee
Q psy17133 81 DNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 81 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s 114 (116)
|.++++....+. .....+..++++|+++++++..
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 998776653332 2334688999999999887653
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.27 E-value=1.8e-09 Score=62.62 Aligned_cols=101 Identities=13% Similarity=0.233 Sum_probs=76.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-eEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-HIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-~i~~~~~~ 83 (116)
..+.+++++| +++.+++...++.|++|+.. ++.+..+..... ...+..+++++++.++++...++ .|.+|+.
T Consensus 164 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~----~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~- 236 (286)
T 1q7f_A 164 EFPNGVVVND-KQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGI----TNYPIGVGINSNGEILIADNHNNFNLTIFTQ- 236 (286)
T ss_dssp SSEEEEEECS-SSEEEEEEGGGTEEEEEETT-CCEEEEESCTTT----SCSEEEEEECTTCCEEEEECSSSCEEEEECT-
T ss_pred CCcEEEEECC-CCCEEEEECCCCEEEEEcCC-CCEEEEEccCCc----cCCCcEEEECCCCCEEEEeCCCCEEEEEECC-
Confidence 4578899999 77877777778999999974 666666644310 24678999999999888887776 9999995
Q ss_pred CCeEEEEeeccc--ccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVHSMVAHL--DAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~ 112 (116)
+++.+..+..+. ..+..++++|+|+++++
T Consensus 237 ~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 237 DGQLISALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp TSCEEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred CCCEEEEEcccCCCCcceeEEECCCCcEEEE
Confidence 466666665433 24779999999987776
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.26 E-value=3e-10 Score=67.43 Aligned_cols=104 Identities=17% Similarity=0.233 Sum_probs=78.3
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-------eCCCeEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-------HDDRHIR 78 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~d~~i~ 78 (116)
.+..++++|+++.++++...++.|++|+..+++.+..+..... ...+..++++| +..+.+. ..+..++
T Consensus 197 ~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~----~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~ 271 (329)
T 3fvz_A 197 VPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF----GRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGF 271 (329)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT----TTCEEEEEEET-TEEEEEECCCCTTCSCCCCEE
T ss_pred CCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc----CCCcceeeecC-CEEEEeCCCEEeccCCCcEEE
Confidence 4788999994377778878899999999988888888754321 35678899999 4333333 3345899
Q ss_pred EEECCCCeEEEEee---cccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+|+..+++.+..+. .+...+..++++|+|..+++..
T Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~ 310 (329)
T 3fvz_A 272 VMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA 310 (329)
T ss_dssp EEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES
T ss_pred EEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC
Confidence 99999999988874 4556789999999997666644
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=6.3e-10 Score=67.62 Aligned_cols=91 Identities=12% Similarity=0.046 Sum_probs=67.6
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
|..++| +++.|+++ .++.|++||+.+.........+ ...+..+.+.+. -++.+..||.+.+||++++.
T Consensus 90 V~~l~f---d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~------~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 90 VIFVCF---HGDQVLVS-TRNALYSLDLEELSEFRTVTSF------EKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp EEEEEE---ETTEEEEE-ESSEEEEEESSSTTCEEEEEEC------SSCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred eeEEEE---CCCEEEEE-cCCcEEEEEchhhhccCcccee------ecceeeEEecCC--CEEEEECCCCEEEEEccCCc
Confidence 889999 44788877 7899999999876655555555 345666665543 38888999999999999877
Q ss_pred EEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 87 LVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 87 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
... +...|++++|+|+| ++.+..
T Consensus 158 ~~~----~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 158 TKQ----LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp EEE----EEESEEEEEECSSE--EEEEET
T ss_pred ccc----ccCCceEEEEcCCc--eEEEEc
Confidence 654 33579999999999 344443
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.24 E-value=2.3e-10 Score=73.25 Aligned_cols=103 Identities=11% Similarity=0.056 Sum_probs=71.7
Q ss_pred CCceEEEEccCCCcEEEEeeCC--------CeEEEEECC-CC---ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDN--------SACVLFDLE-TG---KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH 72 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~--------~~v~i~~~~-~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (116)
..+..+.|+| ++++|+..+.+ ..|++||+. ++ +.......+ ...+..+.|+|||++++++.
T Consensus 188 ~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~------~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 188 RFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP------EEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp SEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET------TBCEEEEEECTTSCEEEEEC
T ss_pred CcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC------CceEcceEECCCCeEEEEEC
Confidence 4566789999 78888776643 479999998 56 333333333 35688999999999777887
Q ss_pred CCC--eEEEEECCCCeEEEEeeccccc--------EEEEEECCCCcEEEeee
Q psy17133 73 DDR--HIRFFDNVSGKLVHSMVAHLDA--------VTSLAVDPQGLYILSGT 114 (116)
Q Consensus 73 ~d~--~i~~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~s 114 (116)
.++ .|.+|+..+++.......+... +..++|+|+++++++++
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 261 RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 777 6777777677655443322221 45788899999887764
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.23 E-value=2e-09 Score=62.84 Aligned_cols=100 Identities=13% Similarity=0.200 Sum_probs=74.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCce---eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKP---VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
..+..++|+| +++.+++...++.|.+|++. +++. ...+... ...+..++++++|.++++. ++.|.+|
T Consensus 172 ~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~------~~~p~~i~~d~~G~l~v~~--~~~v~~~ 242 (296)
T 3e5z_A 172 VKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE------PGKTDGLRVDAGGLIWASA--GDGVHVL 242 (296)
T ss_dssp SSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS------SSCCCSEEEBTTSCEEEEE--TTEEEEE
T ss_pred CCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC------CCCCCeEEECCCCCEEEEc--CCeEEEE
Confidence 4567899999 77777766778899999986 4544 2333222 3457789999999876666 7899999
Q ss_pred ECCCCeEEEEeecccccEEEEEE-CCCCcEEEeeec
Q psy17133 81 DNVSGKLVHSMVAHLDAVTSLAV-DPQGLYILSGTY 115 (116)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~s~ 115 (116)
+.. ++.+..+..+.. +.+++| .|+++.|+.++.
T Consensus 243 ~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 243 TPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp CTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEET
T ss_pred CCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcC
Confidence 986 777777776666 889999 689888876654
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.22 E-value=5.1e-09 Score=60.71 Aligned_cols=103 Identities=13% Similarity=0.250 Sum_probs=77.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+.+++++| +++.+++...++.|.+|+.. ++.+..+..... ...+..++++|++.++++...++.|.+|+..
T Consensus 121 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~- 193 (286)
T 1q7f_A 121 QHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH----LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE- 193 (286)
T ss_dssp SCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTT----CSSEEEEEECSSSEEEEEEGGGTEEEEEETT-
T ss_pred CCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCc----cCCcEEEEECCCCCEEEEECCCCEEEEEcCC-
Confidence 4578899999 77877777778899999964 666666542211 3468899999999988888889999999974
Q ss_pred CeEEEEeecc--cccEEEEEECCCCcEEEeee
Q psy17133 85 GKLVHSMVAH--LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 85 ~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s 114 (116)
++.+..+... ...+..++++++|+++++..
T Consensus 194 g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 194 GQYLRQIGGEGITNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp CCEEEEESCTTTSCSEEEEEECTTCCEEEEEC
T ss_pred CCEEEEEccCCccCCCcEEEECCCCCEEEEeC
Confidence 6666666433 25688999999999887764
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.21 E-value=1.8e-09 Score=64.87 Aligned_cols=100 Identities=9% Similarity=-0.042 Sum_probs=74.1
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeE--EEEcCCCCEEEEEe------------
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINR--VVCHPTLPLTITAH------------ 72 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~------------ 72 (116)
+....|+| +++.|+....+..+++||+.+++....+..+ ...+.. ..++|+++.++...
T Consensus 83 ~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~------~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 83 TFGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVP------AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp SSSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECC------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred ccceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeech------hhcccccceeECCCCCeeccccccCccccccccc
Confidence 34678999 8899999988899999999988876666554 233333 33489998877432
Q ss_pred ----------CCCeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEeee
Q psy17133 73 ----------DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGT 114 (116)
Q Consensus 73 ----------~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s 114 (116)
.+..|.+||+.+++..... .+...+..+.|+| +|+.|+..+
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEE
T ss_pred chhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEE
Confidence 3468999999988765544 3556788999999 999887654
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.20 E-value=2.2e-09 Score=68.22 Aligned_cols=90 Identities=16% Similarity=0.100 Sum_probs=73.8
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEeeccc
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV--SGKLVHSMVAHL 95 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~--~~~~~~~~~~~~ 95 (116)
..+++...++.|.++|..+++.+..+... ..+..+.++||++++++++.++.|.+||+. +++.+..+.. .
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-------~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G 239 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-G 239 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-C
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-------CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-C
Confidence 45566667899999999999988888755 246789999999999999999999999995 7887777764 3
Q ss_pred ccEEEEEEC----CCCcEEEeeec
Q psy17133 96 DAVTSLAVD----PQGLYILSGTY 115 (116)
Q Consensus 96 ~~v~~~~~~----~~~~~l~~~s~ 115 (116)
.....++|+ |+|+++++++.
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~ 263 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAY 263 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEE
T ss_pred CCCceeEEccccCCCCCEEEEEEc
Confidence 346889999 69999987764
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.20 E-value=2.6e-09 Score=62.32 Aligned_cols=99 Identities=10% Similarity=0.058 Sum_probs=76.4
Q ss_pred CCceEEEEccCCCc-EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
....++.|+| +++ .++++..++.|..|+..++ ...+... ...+..++++|+++++++...++.|.+||..
T Consensus 28 ~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~------~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 28 TWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHP------SHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp SSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESS------CSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred ccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECC------CCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 4567899999 666 7777888899999999866 5555554 4568999999999988887778999999998
Q ss_pred CCeEEEEeecc----cccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVHSMVAH----LDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~ 112 (116)
+++........ ...+..++++|+|+++++
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 88765443221 124567999999998886
No 181
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.19 E-value=1.3e-09 Score=66.31 Aligned_cols=94 Identities=12% Similarity=0.087 Sum_probs=73.0
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...+.++.+.+ . + ++++..+|.+.+||+.+++... . ...+.+++|+|+| ++.+..||.+++|+..
T Consensus 126 ~~~v~~i~~~~-p-~-~av~~~dG~L~v~dl~~~~~~~-~---------~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 126 EKPVFQLKNVN-N-T-LVILNSVNDLSALDLRTKSTKQ-L---------AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp SSCEEEEEECS-S-E-EEEEETTSEEEEEETTTCCEEE-E---------EESEEEEEECSSE--EEEEETTSCEEEEEEE
T ss_pred ecceeeEEecC-C-C-EEEEECCCCEEEEEccCCcccc-c---------cCCceEEEEcCCc--eEEEEcCCcEEEEcCC
Confidence 34566777665 2 3 7778899999999998776542 1 2369999999999 6778899999999988
Q ss_pred CCeE--EEEe------e---cccccEEEEEECCCCcEEEe
Q psy17133 84 SGKL--VHSM------V---AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~--~~~~------~---~~~~~v~~~~~~~~~~~l~~ 112 (116)
.++. ...+ . .|...|.++.|.++++++++
T Consensus 191 ~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 191 NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 7775 4455 2 25678999999999999876
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.18 E-value=4.8e-09 Score=62.25 Aligned_cols=105 Identities=11% Similarity=0.066 Sum_probs=78.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCC------------------------CeEEEEECCCCceeEEEecCCcCcCCCCceeEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDN------------------------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRV 59 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~------------------------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 59 (116)
.+.+.+++++| +++++++...+ +.|.+||..+++.+..+.... -..+..+
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-----~~~p~gi 96 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL-----FYLPHGL 96 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT-----CSSEEEE
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc-----cCCceEE
Confidence 46789999999 78888877666 479999998888766654221 3468899
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCe-EEEEee---------cccccEEEEEECC-CCcEEEeee
Q psy17133 60 VCHPTLPLTITAHDDRHIRFFDNVSGK-LVHSMV---------AHLDAVTSLAVDP-QGLYILSGT 114 (116)
Q Consensus 60 ~~~~~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~s 114 (116)
+++|++.++++...++.|++|+..... .+..+. .+-..+..++++| +++++++.+
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC
Confidence 999999988888889999999976442 344442 2233688999999 788877764
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.18 E-value=4.1e-09 Score=61.38 Aligned_cols=91 Identities=11% Similarity=0.092 Sum_probs=75.2
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-c
Q psy17133 17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH-L 95 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~ 95 (116)
++.|++++.++.|++||.++++.+.++..+. ...+..+.+.|+|++++ +.++.|..||. +++.+..+... .
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~ 76 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG 76 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCT-----TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-----cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC
Confidence 4888999999999999998999999988762 13578999999999888 45788999998 79988888754 2
Q ss_pred ccEEEEEECCCCcEEEeeec
Q psy17133 96 DAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 96 ~~v~~~~~~~~~~~l~~~s~ 115 (116)
..+.++.+.++|+++++.+.
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~ 96 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCG 96 (276)
T ss_dssp CEEEEEEECTTSCEEEEEES
T ss_pred ccccccEECCCCCEEEEecC
Confidence 46788899999999987653
No 184
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.15 E-value=7.2e-09 Score=60.71 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=75.7
Q ss_pred CceEEEEccCCCcEE-EEeeCCCeEEEEEC--CCCcee--EEEe-cCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 6 TPTSIDFVRDESTKM-VTAFDNSACVLFDL--ETGKPV--VRID-SSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~--~~~~~~--~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
....++|+| +++.+ ++.+.++.|.+|++ .++... ..+. .... ...+..++++++|.+.++....+.|..
T Consensus 150 ~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~----~~~p~g~~~d~~G~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 150 ISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKE----EQIPDGMCIDAEGKLWVACYNGGRVIR 224 (297)
T ss_dssp BEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGG----GCEEEEEEEBTTSCEEEEEETTTEEEE
T ss_pred cccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCC----CCCCCeeEECCCCCEEEEEcCCCEEEE
Confidence 356789999 66655 55566789999986 455431 1121 1100 245788999999998888888889999
Q ss_pred EECCCCeEEEEeecccccEEEEEEC-CCCcEEEeee
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVD-PQGLYILSGT 114 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~s 114 (116)
||.++++.+..+......+++++|. |+++.|+.++
T Consensus 225 ~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 225 LDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp ECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 9999899988887666789999998 8888765443
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.14 E-value=1.4e-09 Score=70.83 Aligned_cols=101 Identities=5% Similarity=0.009 Sum_probs=69.3
Q ss_pred CceEEEEccCCCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-----
Q psy17133 6 TPTSIDFVRDESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR----- 75 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~----- 75 (116)
.+..+.|+| ++++|+.+..+ ..|++||+.+++.+.... . ...+..++|+|| +.++.+..+.
T Consensus 164 ~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~------~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 164 ALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-K------WVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-E------EEESCCCEESTT-SEEEEEECCCC----
T ss_pred EEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-C------CceeccEEEECC-CEEEEEEecCccccc
Confidence 467789999 78888776532 469999999887654321 1 112357899999 8887776544
Q ss_pred ---------eEEEEECCCCeE--EEEee--cccccEEEEEECCCCcEEEeeec
Q psy17133 76 ---------HIRFFDNVSGKL--VHSMV--AHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 76 ---------~i~~~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
.|++|++.++.. ...+. .+...+..+.|+|||++|+..+.
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 388999876652 22222 22235788999999998886653
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.12 E-value=3.1e-09 Score=63.89 Aligned_cols=99 Identities=9% Similarity=-0.014 Sum_probs=66.7
Q ss_pred CceEEEEccCCCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEe-------
Q psy17133 6 TPTSIDFVRDESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAH------- 72 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~------- 72 (116)
.+..+.|+| +++.|+..+.+ +.|++||+.+++........ ... +.|+| ++++++..+
T Consensus 239 ~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--------~~~-~~~s~~dg~~l~~~~~~~p~~~ 308 (396)
T 3c5m_A 239 SCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--------PCS-HLMSNFDGSLMVGDGCDAPVDV 308 (396)
T ss_dssp EEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--------SEE-EEEECSSSSEEEEEECCC----
T ss_pred cccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--------CCC-CCccCCCCceEEEecCCcceee
Confidence 366789999 77766665432 44999999877654332222 123 88999 999887754
Q ss_pred ---------CCCeEEEEECCCCeEEEEeecccc-----------cEEEEEECCCCcEEEeeec
Q psy17133 73 ---------DDRHIRFFDNVSGKLVHSMVAHLD-----------AVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 73 ---------~d~~i~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~s~ 115 (116)
.+..|.+||+.+++... +..+.. .+..++|+|+|+.|+.++.
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 309 ADADSYNIENDPFLYVLNTKAKSAQK-LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp ------CCCCCCEEEEEETTTTBCCE-EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred ccccccccCCCCcEEEEecccCceEE-ccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 34789999998776533 332332 2456789999998887653
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.12 E-value=1.5e-09 Score=65.35 Aligned_cols=91 Identities=11% Similarity=0.080 Sum_probs=69.7
Q ss_pred CCcEEEEee------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC----------CCeEEE
Q psy17133 16 ESTKMVTAF------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD----------DRHIRF 79 (116)
Q Consensus 16 ~~~~l~~~~------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------d~~i~~ 79 (116)
+++++++.. .++.+++||..+++.+..+... .. . .++++|+++.+++++. ++.|.+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g------~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v 85 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA------FN-G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC------EE-E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCC------CC-C-ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence 445565543 3679999999999888887765 22 3 8999999999988763 567999
Q ss_pred EECCCCeEEEEeecc------cccEEEEEECCCCcEEEeee
Q psy17133 80 FDNVSGKLVHSMVAH------LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~s 114 (116)
||..+.+.+..+... ......++++|+|++|++++
T Consensus 86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN 126 (361)
T ss_dssp EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence 999998888776532 23456789999999998765
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.11 E-value=9.6e-09 Score=60.95 Aligned_cols=95 Identities=11% Similarity=-0.006 Sum_probs=66.4
Q ss_pred CCCceEEEEccCCCcEEEEee---------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAF---------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD 74 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~---------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 74 (116)
...+....+ +++.++... .+..+.+|++.+++.. .+ . .+..+.|+|||+.++..+.+
T Consensus 14 ~~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l--~--------~~~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 14 FAYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI--E--------NATMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp SCEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE--E--------SCEEEEECTTSSEEEEEEEE
T ss_pred eEEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec--c--------cCCCeEECCCCCEEEEEEec
Confidence 344566666 345555432 2567889999877643 33 2 36789999999988876643
Q ss_pred ---C--eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 75 ---R--HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 75 ---~--~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+ .|.+|++.+++........ . +..++|+|+++.|+.++
T Consensus 80 ~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 80 EEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEE
T ss_pred cCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEE
Confidence 3 4888898888776655433 3 89999999999988765
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.07 E-value=1.4e-08 Score=58.22 Aligned_cols=103 Identities=16% Similarity=0.112 Sum_probs=73.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+.++.+++ +++.+++...++.|.+|+............. ...+..+++++++.++++...++.|.+|+...
T Consensus 150 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~------~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 150 NDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTD------ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp CSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSS------CCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred CCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccC------CCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 3578899999 6777776667789999998765433222222 24678999999998777777788999999875
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.........+...+..++++++|+.+++..
T Consensus 223 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 223 TTSTVLPFTGLNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp SCCEECCCCSCSCEEEEEECTTCCEEEEEG
T ss_pred CcceeeccCCCCCceeEEECCCCCEEEEEC
Confidence 544332222334688999999998776654
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.06 E-value=1.1e-09 Score=64.73 Aligned_cols=101 Identities=12% Similarity=0.134 Sum_probs=76.2
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...+.++.|++ +...++....++.++.| .++....+..+ ...+.+++|+|++++++++..++.|.+||.+
T Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~ 74 (333)
T 2dg1_A 5 QQDLPTLFYSG-KSNSAVPIISESELQTI---TAEPWLEISKK------GLQLEGLNFDRQGQLFLLDVFEGNIFKINPE 74 (333)
T ss_dssp -CCCCBCCSCG-GGGCSSCCCCGGGSCEE---ECEEEEEEESS------CCCEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred ccccceeeecC-CccceeEEeecccCccc---ccceeEEEecc------CccccCcEECCCCCEEEEECCCCEEEEEeCC
Confidence 45678889998 66666665667778888 34455566555 3467899999999988888889999999998
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+++.......+...+..++++|+++++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~ 105 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYL 105 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECTTSCEEEEEC
T ss_pred CCcEEEEeeCCCCCcceEEECCCCcEEEEeC
Confidence 8876655434556799999999999877653
No 191
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.04 E-value=2.2e-08 Score=58.57 Aligned_cols=102 Identities=16% Similarity=0.216 Sum_probs=72.7
Q ss_pred CceEEEEc----cCCCcEEEE-eeCCCeEEEEECC-CCce-----eEEEecCCcCcCCC-CceeEEEEcCCCCEEEEEeC
Q psy17133 6 TPTSIDFV----RDESTKMVT-AFDNSACVLFDLE-TGKP-----VVRIDSSQFGVSGG-GGINRVVCHPTLPLTITAHD 73 (116)
Q Consensus 6 ~v~~~~~~----~~~~~~l~~-~~~~~~v~i~~~~-~~~~-----~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~ 73 (116)
.+..+.|+ | +++.++. ...++.|.+|+.. +++. ...+..+ . ..+..+++++++.++++...
T Consensus 173 ~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~------~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 173 FPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT------HEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp SEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC------SSCEEEEEEEBTTCCEEEEEET
T ss_pred CcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC------CCCCCCceEECCCCCEEEEEcC
Confidence 45678888 8 6655544 4567899999976 3432 1122222 2 45788999999998888878
Q ss_pred CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
++.|.+|+.++++.+..+..+...+.+++|+|+++.|..++
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence 89999999987776666655556789999999999555443
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.02 E-value=1.6e-09 Score=65.08 Aligned_cols=81 Identities=15% Similarity=0.061 Sum_probs=57.5
Q ss_pred ceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 7 PTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+..++|+| ++++|+.... +..+.+|+..+++........ ......+.|+|+++.++..+.++.|++|++.
T Consensus 38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~------~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGK------GDNTFGGFISTDERAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSS------CBCTTTCEECTTSSEEEEEETTTEEEEEETT
T ss_pred eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEEeecCC------CCccccceECCCCCEEEEEEcCCcEEEEECC
Confidence 67788999 7787766643 347888998877643332222 1223347899999999999999999999999
Q ss_pred CCeEEEEeecc
Q psy17133 84 SGKLVHSMVAH 94 (116)
Q Consensus 84 ~~~~~~~~~~~ 94 (116)
+++.......+
T Consensus 111 ~~~~~~~~~~~ 121 (396)
T 3c5m_A 111 TLEEQVIYTVD 121 (396)
T ss_dssp TCCEEEEEECC
T ss_pred CCCcEEEEecc
Confidence 88766555433
No 193
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.99 E-value=2.5e-07 Score=55.24 Aligned_cols=110 Identities=11% Similarity=-0.004 Sum_probs=75.2
Q ss_pred CCCceEEEEccCCCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe---CC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH---DD 74 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~---~d 74 (116)
...+..+.+++ +++++++... ..+|.+||+.+++.+..+........+...+..+++++++. .+++-. .+
T Consensus 66 ~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 66 FDTVLGIKSDG-NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CSCEEEEEECS-SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred eeEeeEEEEcC-CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 35688999999 6666555433 57899999998887776654311111124568999998654 445544 57
Q ss_pred CeEEEEECCCCeEEEEeeccc-----------------------------ccEEEEEECCCCcEEEeee
Q psy17133 75 RHIRFFDNVSGKLVHSMVAHL-----------------------------DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~s 114 (116)
+.|.+||+.+++..+.+..|. ..+..++|+|+++.|+.+.
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~ 213 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSP 213 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEE
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEe
Confidence 899999998887766553210 1357899999999887654
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.99 E-value=7.2e-08 Score=56.14 Aligned_cols=97 Identities=14% Similarity=0.074 Sum_probs=78.3
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
..+.+.+ +++++++...++.|..||.. ++.+..+... ..+..+...+++.++++...++.|..+|.++|+.
T Consensus 128 ~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 128 RQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred cCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 3455677 78899998899999999998 9988888765 2355677789999999888888999999999999
Q ss_pred EEEeeccc------ccEEEEEECCCCcEEEee
Q psy17133 88 VHSMVAHL------DAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 88 ~~~~~~~~------~~v~~~~~~~~~~~l~~~ 113 (116)
+..+.... ..+..++..++|+.+++.
T Consensus 199 ~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 199 VRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 98886432 236788888999988876
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.98 E-value=6.9e-08 Score=58.52 Aligned_cols=93 Identities=12% Similarity=-0.028 Sum_probs=69.3
Q ss_pred ccCCCcEEEEeeC--CC---eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CCCeE
Q psy17133 13 VRDESTKMVTAFD--NS---ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DDRHI 77 (116)
Q Consensus 13 ~~~~~~~l~~~~~--~~---~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d~~i 77 (116)
.| +++.+++... .. .|.++|..+++.+..+... .. . .+.++||++.++.+. .++.|
T Consensus 29 ~~-~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g------~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v 99 (373)
T 2mad_H 29 GA-DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG------FL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred CC-CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC------CC-C-CeEECCCCCEEEEEeccccccccCCCCCeE
Confidence 35 5666666553 33 7899999999888777654 22 3 999999999888875 36789
Q ss_pred EEEECCCCeEEEEeecc-------cccEEEEEECCCCcEEEeee
Q psy17133 78 RFFDNVSGKLVHSMVAH-------LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 78 ~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~s 114 (116)
.+||..+.+.+..+... ......+.|+|||++|+.++
T Consensus 100 ~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEe
Confidence 99999988887766422 12356899999999998765
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.98 E-value=2.3e-07 Score=59.14 Aligned_cols=98 Identities=7% Similarity=-0.036 Sum_probs=75.4
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEc----CCCCEEEEEeC-CCeEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCH----PTLPLTITAHD-DRHIR 78 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~-d~~i~ 78 (116)
.+..+.|+| +++++++++.++.|.+||+. +++.+.++... .....++++ |+|+++++++. ++.+.
T Consensus 198 ~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 198 AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-------SEARSIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-------SEEEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred CccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-------CCCceeEEccccCCCCCEEEEEEccCCeEE
Confidence 456889999 88999888999999999995 77778777654 246789999 69998877655 69999
Q ss_pred EEECCCCeEEEEeecc-----------cccEEEEEECCCCcEEE
Q psy17133 79 FFDNVSGKLVHSMVAH-----------LDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~ 111 (116)
++|..+.+.+..+... ...+..+..++++..++
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~v 313 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFI 313 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEE
Confidence 9999999888776521 12566777777755443
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.98 E-value=6.6e-08 Score=57.47 Aligned_cols=99 Identities=9% Similarity=-0.045 Sum_probs=73.6
Q ss_pred CceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133 6 TPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---------- 74 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---------- 74 (116)
.+..+.+ . ++..+++.. .++.|.++|..+++.+..+... .....+.++|+++++++...+
T Consensus 132 ~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~ 202 (328)
T 3dsm_A 132 STEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEA 202 (328)
T ss_dssp BCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred CcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-------CCccceEEcCCCCEEEEECCCccCCccccCC
Confidence 4566777 3 445555544 4789999999999888777654 245778899999977776554
Q ss_pred CeEEEEECCCCeEEEEeecc-cccEEEEEECCCCcEEEee
Q psy17133 75 RHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 113 (116)
+.|.++|..+++....+... ......++|+|+++.|+.+
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE
T ss_pred ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE
Confidence 78999999999887766532 2368899999999888764
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.95 E-value=3.1e-07 Score=54.52 Aligned_cols=100 Identities=18% Similarity=0.210 Sum_probs=70.9
Q ss_pred CceEEEEccCCCcEEE-EeeCCCeEEEEECC--CC-ce--eEEE---ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133 6 TPTSIDFVRDESTKMV-TAFDNSACVLFDLE--TG-KP--VVRI---DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH 76 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~-~~~~~~~v~i~~~~--~~-~~--~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~ 76 (116)
....+.|+| +++.++ +...++.|.+|+.. ++ +. ...+ ... ...+..++++++|.++++...++.
T Consensus 180 ~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~------~~~p~gi~~d~~G~lwva~~~~~~ 252 (326)
T 2ghs_A 180 IPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGI------KGGMDGSVCDAEGHIWNARWGEGA 252 (326)
T ss_dssp SEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTS------SSEEEEEEECTTSCEEEEEETTTE
T ss_pred ccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCC------CCCCCeeEECCCCCEEEEEeCCCE
Confidence 456789999 666554 44557899999975 55 31 1122 212 345678999999988777777789
Q ss_pred EEEEECCCCeEEEEeecccccEEEEEEC-CCCcEEEee
Q psy17133 77 IRFFDNVSGKLVHSMVAHLDAVTSLAVD-PQGLYILSG 113 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~ 113 (116)
|..|+. +++.+..+......+.+++|. ++++.|+.+
T Consensus 253 v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 253 VDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp EEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred EEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 999998 577777776566679999998 888766543
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.94 E-value=2.5e-08 Score=60.64 Aligned_cols=95 Identities=15% Similarity=0.046 Sum_probs=72.6
Q ss_pred EEccCCCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CCC
Q psy17133 11 DFVRDESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DDR 75 (116)
Q Consensus 11 ~~~~~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d~ 75 (116)
...| +++.+++... ++.|.++|..+++.+..+... ... . +.++||++.++.++ .++
T Consensus 39 ~~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG------~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~ 109 (386)
T 3sjl_D 39 APAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG------FLP-N-PVVADDGSFIAHASTVFSRIARGERTD 109 (386)
T ss_dssp CCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC------SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred ccCC-CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC------CCC-c-EEECCCCCEEEEEcccccccccCCCCC
Confidence 3467 6677766654 579999999999999988765 233 4 99999999887765 367
Q ss_pred eEEEEECCCCeEEEEeeccc-------ccEEEEEECCCCcEEEeee
Q psy17133 76 HIRFFDNVSGKLVHSMVAHL-------DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~s 114 (116)
.|.+||..+.+.+..+.... .....+.|+|||++++.++
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan 155 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 155 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEE
Confidence 89999999999888775221 2456789999999988764
No 200
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.94 E-value=3.7e-08 Score=63.92 Aligned_cols=102 Identities=8% Similarity=0.001 Sum_probs=68.4
Q ss_pred ceEEEEccCCCcEEEEeeCCCe----------------EEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcCCCCEE
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSA----------------CVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHPTLPLT 68 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~----------------v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (116)
+..+.|+| +++.|+.+..+.. |++|++.+++.. ..+..... ...+..+.|+|||+++
T Consensus 173 ~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~----~~~~~~~~~SpDg~~l 247 (710)
T 2xdw_A 173 FSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE----PKWMGGAELSDDGRYV 247 (710)
T ss_dssp SCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC----TTCEEEEEECTTSCEE
T ss_pred cceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC----CeEEEEEEEcCCCCEE
Confidence 56799999 7788887765544 999999877632 22332210 3347789999999988
Q ss_pred EEEeC-----CCeEEEEECCC------Ce-EEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 69 ITAHD-----DRHIRFFDNVS------GK-LVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 69 ~~~~~-----d~~i~~~~~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+..+. +..|++||+.+ +. ....+..+...+.. .|+|+|+.|+..+
T Consensus 248 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s 304 (710)
T 2xdw_A 248 LLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKT 304 (710)
T ss_dssp EEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEE
T ss_pred EEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEE
Confidence 77654 57899999976 43 24444444444443 4788888776544
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.93 E-value=7.9e-08 Score=55.13 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=71.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+.++.+.+ +++.+++...++.|.+|+..+.......... ...+..++++++++++++...++.|.+|+...
T Consensus 108 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 108 NYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTG------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp SSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCS------CCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred CCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeecccc------CCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 4578899998 7777777667889999976544332211111 23578899999999777777788999999886
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.............+..++++++|..+++.
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred CceEeecccCCCCceEEEECCCCCEEEEE
Confidence 65544332333568899999999776654
No 202
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.91 E-value=2.7e-08 Score=64.52 Aligned_cols=99 Identities=11% Similarity=0.101 Sum_probs=67.0
Q ss_pred CceEEEEccCCCcEEEEee-----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-----
Q psy17133 6 TPTSIDFVRDESTKMVTAF-----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR----- 75 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~----- 75 (116)
.+..+.|+| ++++|+.+. ....|+++|+.+++.+.... . ......++|+ |++.++....+.
T Consensus 130 ~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~------~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 130 ALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-K------DVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp EEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-E------EEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred EEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-C------CceeccEEEe-CCCEEEEEEecCccccc
Confidence 467789999 778777532 23579999999988654311 1 1113567899 999888777663
Q ss_pred --------eEEEEECCCCeE--EEEee--c-ccccEEEEEECCCCcEEEee
Q psy17133 76 --------HIRFFDNVSGKL--VHSMV--A-HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 76 --------~i~~~~~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~l~~~ 113 (116)
.|++|++.++.. ...+. . +......+.|+|||++|+..
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~ 251 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLIS 251 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEE
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEE
Confidence 499999876542 22232 2 33456789999999988643
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.85 E-value=2.3e-07 Score=55.10 Aligned_cols=106 Identities=16% Similarity=0.130 Sum_probs=71.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~ 83 (116)
..+..+++++ ++..+++...++.|.+||..+++....+..... .........+++ .+++++++.. .++.|.++|..
T Consensus 84 ~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~-~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 84 TSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDM-DMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp SSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC-CTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETT
T ss_pred CCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc-cccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECC
Confidence 4577889988 554444443789999999998887777764420 000113456666 3444444443 48899999999
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+++.+..+... .....++++|+|++++++.
T Consensus 161 t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 161 TDKVVDELTIG-IQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp TTEEEEEEECS-SCBCCCEECTTSEEEEEBC
T ss_pred CCeEEEEEEcC-CCccceEEcCCCCEEEEEC
Confidence 99988777642 3456789999999777653
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.84 E-value=1.6e-06 Score=50.73 Aligned_cols=97 Identities=12% Similarity=0.070 Sum_probs=69.8
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
..+..|+|+++..+++...++.|+.||..+++. ..+.. ...+.+++++++++++++. +..|.+||.++++
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~-------~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTM-------DAPVSSVALRQSGGYVATI--GTKFCALNWKEQS 84 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEEC-------SSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeC-------CCceEEEEECCCCCEEEEE--CCeEEEEECCCCc
Confidence 457889985556667767789999999987654 33332 2468899999999966554 5689999998887
Q ss_pred EEEEeec----ccccEEEEEECCCCcEEEee
Q psy17133 87 LVHSMVA----HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 87 ~~~~~~~----~~~~v~~~~~~~~~~~l~~~ 113 (116)
....... ....+..++++|+|+++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEec
Confidence 6443322 12357889999999977653
No 205
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.83 E-value=8.3e-08 Score=58.12 Aligned_cols=79 Identities=10% Similarity=-0.130 Sum_probs=64.2
Q ss_pred eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeEEEEeecc---
Q psy17133 28 ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DDRHIRFFDNVSGKLVHSMVAH--- 94 (116)
Q Consensus 28 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d~~i~~~~~~~~~~~~~~~~~--- 94 (116)
.+.++|..+++.+..+... ..+ .+.++||++.++.+. .++.|.+||..+++.+..+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG------~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~ 118 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGA------FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP 118 (368)
T ss_dssp EEEEEETTTTEEEEEEEEC------TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC
T ss_pred eEEEEECCCCeEEEEEeCC------CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc
Confidence 8899999999999998765 233 799999999888775 3688999999999999887632
Q ss_pred ----cccEEEEEECCCCcEEEeee
Q psy17133 95 ----LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 95 ----~~~v~~~~~~~~~~~l~~~s 114 (116)
......++++|||++++.+.
T Consensus 119 ~~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 119 RFSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp SCCBSCCTTSEEECTTSSCEEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEEc
Confidence 12356789999999988764
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.81 E-value=2.2e-07 Score=56.56 Aligned_cols=104 Identities=11% Similarity=-0.061 Sum_probs=71.5
Q ss_pred EEEEccCCCcEEEEee----------CCCeEEEEECCCCceeEEEecCCcC-cCCCCceeEEEEcCCCCEEEEEeC--CC
Q psy17133 9 SIDFVRDESTKMVTAF----------DNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHPTLPLTITAHD--DR 75 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~--d~ 75 (116)
.+.++| +++.+++++ .++.|.+||..+++.+..+...... .........+.++|||++++.+.. ++
T Consensus 82 ~va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~ 160 (386)
T 3sjl_D 82 NPVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP 160 (386)
T ss_dssp EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred cEEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCC
Confidence 489999 777776654 3567999999999988887542100 000124667999999998888764 68
Q ss_pred eEEEEECCCCeEEEEeeccc-ccE------EEEEECCCCcEEEee
Q psy17133 76 HIRFFDNVSGKLVHSMVAHL-DAV------TSLAVDPQGLYILSG 113 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~-~~v------~~~~~~~~~~~l~~~ 113 (116)
.|.++|+.+++.+..+.... ..+ .-++.++||++++..
T Consensus 161 ~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~ 205 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVA 205 (386)
T ss_dssp EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEE
Confidence 99999999999988775211 000 113667888876654
No 207
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.81 E-value=1.9e-06 Score=49.89 Aligned_cols=102 Identities=12% Similarity=0.100 Sum_probs=72.6
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...+.++.+.+ +++.+++...++.|.+|+.. ++. ..+..... ...+..+++++++.++++...++.|..|+..
T Consensus 14 ~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 14 DTGPYGITVSD-KGKVWITQHKANMISCINLD-GKI-TEYPLPTP----DAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCE-EEEECSST----TCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCe-EEecCCcc----cCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 35688999998 77777766667899999987 543 33321111 3568899999999988887778899999976
Q ss_pred CCeEEEE-eecccccEEEEEECCCCcEEEee
Q psy17133 84 SGKLVHS-MVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 84 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
++.... .......+..++++++++.+++.
T Consensus 87 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 116 (299)
T 2z2n_A 87 -GIIKEYTLPNPDSAPYGITEGPNGDIWFTE 116 (299)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred -CcEEEEeCCCcCCCceeeEECCCCCEEEEe
Confidence 443221 22234568899999999877764
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.81 E-value=1.2e-07 Score=58.49 Aligned_cols=91 Identities=13% Similarity=0.018 Sum_probs=69.8
Q ss_pred CCcEEEEeeC-C----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CCCeEEEE
Q psy17133 16 ESTKMVTAFD-N----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DDRHIRFF 80 (116)
Q Consensus 16 ~~~~l~~~~~-~----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d~~i~~~ 80 (116)
+++.+++... . +.|.++|..+++.+..+... ... .+.++||++.++.+. .++.|.++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG------~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG------FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC------SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC------CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 5566665544 2 69999999999999998865 233 899999999887765 36789999
Q ss_pred ECCCCeEEEEeecc-------cccEEEEEECCCCcEEEeee
Q psy17133 81 DNVSGKLVHSMVAH-------LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 81 ~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~s 114 (116)
|..+++.+..+... ......+.|+|||++++.+.
T Consensus 155 D~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n 195 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQ 195 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEE
T ss_pred ECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEe
Confidence 99999988876521 12345789999999998765
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.75 E-value=2.5e-06 Score=50.68 Aligned_cols=97 Identities=11% Similarity=0.002 Sum_probs=68.7
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
..+..|+|+++..+++...++.|..|+..+++. ..+... ..+.++.++|+++++++. +..|.+||..+++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~-------~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~ 120 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHALP-------FMGSALAKISDSKQLIAS--DDGLFLRDTATGV 120 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEECS-------SCEEEEEEEETTEEEEEE--TTEEEEEETTTCC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEECC-------CcceEEEEeCCCeEEEEE--CCCEEEEECCCCc
Confidence 367889995456667776788999999986653 333322 468899999999877765 3459999998887
Q ss_pred EEEEeec----ccccEEEEEECCCCcEEEee
Q psy17133 87 LVHSMVA----HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 87 ~~~~~~~----~~~~v~~~~~~~~~~~l~~~ 113 (116)
....... ....+..++++|+|+++++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 151 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGT 151 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEe
Confidence 6443221 12357899999999977654
No 210
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.74 E-value=3.6e-06 Score=48.71 Aligned_cols=101 Identities=7% Similarity=0.015 Sum_probs=71.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+.++.+.+ ++..+++...++.+..|+.. ++ ...+..... ...+..+.+++++.++++...++.|..|+. +
T Consensus 57 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 57 AKVMCLTISS-DGEVWFTENAANKIGRITKK-GI-IKEYTLPNP----DSAPYGITEGPNGDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SC-EEEEECSST----TCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred CceeeEEECC-CCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCc----CCCceeeEECCCCCEEEEecCCceEEEECC-C
Confidence 4678899988 67777776667889999976 43 233332111 346889999999998888777889999998 5
Q ss_pred CeEEEEe-ecccccEEEEEECCCCcEEEee
Q psy17133 85 GKLVHSM-VAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 85 ~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
++..... ......+..++++++++.+++.
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 6554332 2234568899999999877654
No 211
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.71 E-value=4.8e-07 Score=58.71 Aligned_cols=95 Identities=6% Similarity=-0.069 Sum_probs=62.2
Q ss_pred eEEEEccCCCcEEEEeeCCCe-------------EEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133 8 TSIDFVRDESTKMVTAFDNSA-------------CVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH 72 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~-------------v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (116)
..+.|+| +++.|+.++.+.. |++|++.+++. ...+..... ...+..+.|+|||++++..+
T Consensus 171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~----~~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD----PTTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC----TTCEEEEEECTTSCCEEEEE
T ss_pred cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC----CEEEEEEEECCCCCEEEEEE
Confidence 6789999 7788888776554 99999987763 233332211 34678999999999887766
Q ss_pred CCC----eEEEEECCCCeEEEEeecccccEEEEEECCCCcE
Q psy17133 73 DDR----HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLY 109 (116)
Q Consensus 73 ~d~----~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 109 (116)
.++ .|++++..+++... +..+...+....+ +++++
T Consensus 246 ~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~~~~-~~g~l 284 (695)
T 2bkl_A 246 LRGWSENDVYWKRPGEKDFRL-LVKGVGAKYEVHA-WKDRF 284 (695)
T ss_dssp EETTTEEEEEEECTTCSSCEE-EEECSSCCEEEEE-ETTEE
T ss_pred eCCCCceEEEEEcCCCCceEE-eecCCCceEEEEe-cCCcE
Confidence 555 67777766555443 3333444455555 56663
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.70 E-value=1.9e-06 Score=50.32 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=69.7
Q ss_pred CCceEEEEccCCCcEEEE-------eeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCe
Q psy17133 5 GTPTSIDFVRDESTKMVT-------AFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRH 76 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~-------~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~ 76 (116)
..+.++.|++ ++..+++ ...++.|.+|+..+++... +.... ...+...+..+.++++ +.++++.. .+.
T Consensus 18 ~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~-~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPE-VNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp TTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCE-ETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred CCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecc-cCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 3567899998 7777777 5678899999987776533 22200 0000246889999999 76555554 447
Q ss_pred EEEEECCCCeEEEE-eec----ccccEEEEEECCCCcEEEeee
Q psy17133 77 IRFFDNVSGKLVHS-MVA----HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 i~~~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~s 114 (116)
|.+|+.+ ++.... ... ....+..++++++++++++..
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 8999988 765443 221 123478999999998877653
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.68 E-value=6.8e-06 Score=50.44 Aligned_cols=102 Identities=12% Similarity=0.070 Sum_probs=70.1
Q ss_pred EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc---------CCCCceeEEEEcCCCCEEEEEe-CCCeEE
Q psy17133 9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV---------SGGGGINRVVCHPTLPLTITAH-DDRHIR 78 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~-~d~~i~ 78 (116)
.++|+|+++.++++...++.|+.|+.. ++ +..+.+..... ..-.....++++|++.++++-. .++.|+
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 899999556666666678899999976 33 33333321000 0013478999999999777777 889999
Q ss_pred EEECCCCeEEEEeecc---------------cccEEEEEECCCCcEEEee
Q psy17133 79 FFDNVSGKLVHSMVAH---------------LDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~ 113 (116)
.|+..+++... +.++ -.....+++++++.++++-
T Consensus 349 ~~~~~~G~v~~-~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad 397 (409)
T 3hrp_A 349 KLDILDGYVST-VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE 397 (409)
T ss_dssp EEETTTTEEEE-EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE
T ss_pred EEECCCCEEEE-EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE
Confidence 99987787543 3322 1358899999998777654
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.64 E-value=2.3e-06 Score=52.50 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=68.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC--eEEEEEC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR--HIRFFDN 82 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~--~i~~~~~ 82 (116)
..+..++|++ +++++++...++.|++||..+++........ .... ++++|++..++.+..++ .|..++.
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-------~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-------KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETC-------CBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccC-------CCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 4678899998 7777777777899999999876654444332 2234 89999999888887755 8999998
Q ss_pred CCCeEEEEe----ecccccEEEEEECC-CCcEEE
Q psy17133 83 VSGKLVHSM----VAHLDAVTSLAVDP-QGLYIL 111 (116)
Q Consensus 83 ~~~~~~~~~----~~~~~~v~~~~~~~-~~~~l~ 111 (116)
..+.....+ ......+..++++| ++.+++
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv 235 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF 235 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE
Confidence 765543333 21345677889999 444443
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.63 E-value=1.2e-06 Score=57.34 Aligned_cols=101 Identities=9% Similarity=0.067 Sum_probs=64.0
Q ss_pred eEEEEccCCCcEEEEeeCCC--------------eEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEE
Q psy17133 8 TSIDFVRDESTKMVTAFDNS--------------ACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITA 71 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~--------------~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (116)
..+.|+| + +.|+.+..+. .|++|++.+++. ...+..... ...+..+.|+|||++++..
T Consensus 212 ~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----~~~~~~~~~SpDG~~l~~~ 285 (741)
T 1yr2_A 212 SGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL----PKRGHGASVSSDGRWVVIT 285 (741)
T ss_dssp CCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC----TTCEEEEEECTTSCEEEEE
T ss_pred ccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC----CeEEEEEEECCCCCEEEEE
Confidence 5688999 6 7776665433 488999877653 223332210 2347899999999988776
Q ss_pred eCC-----CeEEEEECCCC--eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133 72 HDD-----RHIRFFDNVSG--KLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 72 ~~d-----~~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
+.+ ..|++||+.++ +....+..+........ +|+++.|+..+.
T Consensus 286 ~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~ 335 (741)
T 1yr2_A 286 SSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSG 335 (741)
T ss_dssp EECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEEC
T ss_pred EEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEEC
Confidence 644 48999999876 31334443433344443 488887776543
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.61 E-value=6e-06 Score=48.47 Aligned_cols=97 Identities=13% Similarity=0.052 Sum_probs=68.7
Q ss_pred CceEEEEccCCCc-EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 6 TPTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 6 ~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
......|+| +++ ++++...++.+..|+. +++ ...+... ...+..+.++++|+++++...++.|..|+..
T Consensus 46 ~~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~------~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 46 WSEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDA------TAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp SEEEEEEEG-GGTEEEEEETTTTEEEEEET-TSC-EEEEEES------CSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCC------CCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 346788999 566 5666667899999998 454 3444433 3568899999999977777677899999986
Q ss_pred CeEEEEeecc----cccEEEEEECCCCcEEEe
Q psy17133 85 GKLVHSMVAH----LDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 85 ~~~~~~~~~~----~~~v~~~~~~~~~~~l~~ 112 (116)
++........ ...+..++++|+|+++++
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 6543322211 124567999999998885
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.59 E-value=6.7e-06 Score=49.89 Aligned_cols=75 Identities=8% Similarity=0.089 Sum_probs=59.3
Q ss_pred EEEEccCCCcEEEEeeC----------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe-CCCe
Q psy17133 9 SIDFVRDESTKMVTAFD----------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH-DDRH 76 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~----------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-~d~~ 76 (116)
.+.++| +++.+.+... .+.|.++|..+++.+..+... .....+.|+||++ .++++. .++.
T Consensus 271 ~~~~s~-d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-------~~p~~i~~s~Dg~~~l~v~~~~~~~ 342 (373)
T 2mad_H 271 QVAYLK-SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-------HDVDAISVAQDGGPDLYALSAGTEV 342 (373)
T ss_pred eEEECC-CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-------CCcCeEEECCCCCeEEEEEcCCCCe
Confidence 367888 5566655432 357999999999988888654 3578999999998 777777 5899
Q ss_pred EEEEECCCCeEEEEe
Q psy17133 77 IRFFDNVSGKLVHSM 91 (116)
Q Consensus 77 i~~~~~~~~~~~~~~ 91 (116)
|.++|..+++.+..+
T Consensus 343 V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 343 LHIYDAGAGDQDQST 357 (373)
T ss_pred EEEEECCCCCEEeee
Confidence 999999999988774
No 218
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.59 E-value=5.1e-06 Score=48.28 Aligned_cols=102 Identities=13% Similarity=0.030 Sum_probs=70.7
Q ss_pred EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE
Q psy17133 10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVH 89 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 89 (116)
+.+++ +++.++++..++.++++|..+.+.+..+....... .-..++.+.+. ++++.+....++.|.+.|..+++.+.
T Consensus 110 ~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~-p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 110 WGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH-RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLG 186 (266)
T ss_dssp CEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE-ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEE
T ss_pred EEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc-ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEE
Confidence 34556 45666666668899999999988888776431100 01235677777 67655555568899999999999988
Q ss_pred Eeeccc-------------ccEEEEEECCCCcEEEeee
Q psy17133 90 SMVAHL-------------DAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 90 ~~~~~~-------------~~v~~~~~~~~~~~l~~~s 114 (116)
.+.... .....++|+|+++.++.++
T Consensus 187 ~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 187 WILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 876321 2468999999988766554
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.58 E-value=5.4e-06 Score=48.68 Aligned_cols=104 Identities=12% Similarity=0.055 Sum_probs=67.4
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE----EeC------
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT----AHD------ 73 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~------ 73 (116)
...+..+.+++ +++++++...++.|.+|+.. ++.. .+...... .....+..+.++|+|.++++ +..
T Consensus 85 ~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~-~~~~~~~~-~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~ 160 (305)
T 3dr2_A 85 TAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAH-LLVGRYAG-KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC 160 (305)
T ss_dssp CSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE-EEECEETT-EECSCCCCEEECTTSCEEEECCSGGGSCGGGSC
T ss_pred CCccceeeECC-CCCEEEEECCCCEEEEECCC-CCEE-EEEeccCC-CccCCCCCEEECCCCCEEEeCcCCCcccccccc
Confidence 34577899999 77766665566889999986 5532 22211000 00134678999999998886 321
Q ss_pred -------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 74 -------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 74 -------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.+.|..++..+++..... .......++|+|+++.|+.+
T Consensus 161 ~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~ 205 (305)
T 3dr2_A 161 PADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVS 205 (305)
T ss_dssp CCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEE
T ss_pred ccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEE
Confidence 256777887667654433 33456789999999977654
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.58 E-value=1.3e-05 Score=46.32 Aligned_cols=102 Identities=9% Similarity=0.076 Sum_probs=72.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
...+.++.+.+ +++.+++...++.|.+|+.. ++.. .+..... ...+..+++.+++.++++...++.|..+|..
T Consensus 19 ~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 19 DSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIK-EFEVPTP----DAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE-EEECSST----TCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceE-EEECCCC----CCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 35678899998 67777776678899999987 5433 2322111 3468899999999988877778899999987
Q ss_pred CCeEEEE-eecccccEEEEEECCCCcEEEee
Q psy17133 84 SGKLVHS-MVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 84 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
++.... .......+..++++++++++++.
T Consensus 92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 121 (300)
T 2qc5_A 92 -GGFTEYPLPQPDSGPYGITEGLNGDIWFTQ 121 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred -CCeEEecCCCCCCCCccceECCCCCEEEEc
Confidence 655322 22233568899999999877664
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=1.9e-06 Score=51.46 Aligned_cols=101 Identities=7% Similarity=-0.029 Sum_probs=67.3
Q ss_pred ceEEEEccCCCcEEEEeeCC-CeEEEEECC---CCc-----ee--EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDN-SACVLFDLE---TGK-----PV--VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR 75 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~-~~v~i~~~~---~~~-----~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 75 (116)
+..++|+| +++.|+++... ..++.++.. .+. .. ....++ .+....++++++|.++++...++
T Consensus 197 ~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~------~g~pdgia~d~~G~l~va~~~~~ 269 (343)
T 2qe8_A 197 VNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE------KPICDGISIDKDHNIYVGDLAHS 269 (343)
T ss_dssp EEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE------CCSCSCEEECTTCCEEEEEGGGT
T ss_pred cceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc------CCCCceEEECCCCCEEEEccCCC
Confidence 57899999 67777766544 356555532 111 00 011122 23467899999999999988899
Q ss_pred eEEEEECCCCeEEEEeec-ccccEEEEEECCCCcEEEeee
Q psy17133 76 HIRFFDNVSGKLVHSMVA-HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s 114 (116)
.|.+|+.++++....... ....+..++|.++++++++.+
T Consensus 270 ~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 270 AIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred eEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 999999856765443332 234688999999998877754
No 222
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.54 E-value=1.1e-05 Score=46.76 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=66.2
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH- 94 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~- 94 (116)
+++.|+.+.....++++|..+.+.+..++...... .-..++.+.+. +|++.+..-.++.|.+.|.++++.+..+...
T Consensus 135 dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~-~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 135 NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE-ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE-ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc-cccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence 44556555557788888888888777766531100 01234556665 6766665656889999999999998887531
Q ss_pred -----------cccEEEEEECCCCcEEEeeec
Q psy17133 95 -----------LDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 95 -----------~~~v~~~~~~~~~~~l~~~s~ 115 (116)
..-...++|+|+++.|+.++.
T Consensus 213 L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 213 ILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp GGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 124589999998887766554
No 223
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.53 E-value=1.9e-05 Score=45.69 Aligned_cols=101 Identities=7% Similarity=-0.050 Sum_probs=71.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..+.++.+.+ +++.+++...++.|..+|.. ++. ..+..... ...+..+++.+++.++++...++.|..++..
T Consensus 62 ~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 133 (300)
T 2qc5_A 62 AKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGF-TEYPLPQP----DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD- 133 (300)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE-EEEECSST----TCCEEEEEECSTTCEEEEETTTTEEEEECTT-
T ss_pred CcceeEEECC-CCCEEEEecCCCeEEEECCC-CCe-EEecCCCC----CCCCccceECCCCCEEEEccCCCeEEEECCC-
Confidence 4678888888 67777766667889999987 554 33332111 3468899999999988887778899999987
Q ss_pred CeEEEE-eecccccEEEEEECCCCcEEEee
Q psy17133 85 GKLVHS-MVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 85 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
++.... +......+..++++++++.+++.
T Consensus 134 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 134 GTIYEYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence 655432 22234568899999999866554
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.51 E-value=4.9e-06 Score=50.51 Aligned_cols=87 Identities=9% Similarity=0.080 Sum_probs=64.9
Q ss_pred EEEccCCCcEEEEeeC---------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe-CCCeEE
Q psy17133 10 IDFVRDESTKMVTAFD---------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH-DDRHIR 78 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~---------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-~d~~i~ 78 (116)
+.++| +++.++++.. ...+.++|..+++.+..+... .....+.++|+++ .+++.. .++.|.
T Consensus 269 v~~s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-------~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 269 VAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-------HDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-------EEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-------CCcceEEECCCCCEEEEEccCCCCeEE
Confidence 67899 6666665432 235679999999988888755 3588999999987 566666 599999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECC
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDP 105 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~ 105 (116)
++|+.+++.+..+.... ....+++.+
T Consensus 341 VID~~t~kvv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 341 IYDAASDQDQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp EEESSSCEEEEECCCCS-CCCEEECCC
T ss_pred EEECCCCcEEEEEECCC-CCCEEEeec
Confidence 99999999998887433 345566554
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.49 E-value=1.7e-05 Score=49.37 Aligned_cols=103 Identities=14% Similarity=0.132 Sum_probs=73.2
Q ss_pred eEEEEccCCCcEEEEeeCC------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---------
Q psy17133 8 TSIDFVRDESTKMVTAFDN------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH--------- 72 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 72 (116)
-.+...| ++ .++++..+ +.+.++|..+.+.+.+++..... ...-..+.|+|+++.+++..
T Consensus 141 h~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~---~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 141 HTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD---QYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT---CCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred cceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC---ccccceEEECCCCCEEEEccCcCcccccc
Confidence 3456778 66 66655444 78999999999999888743110 12234588899999888875
Q ss_pred ----------CCCeEEEEECCCCeEEEEeecc--cccEEEEEE--CCCCcEEEeeec
Q psy17133 73 ----------DDRHIRFFDNVSGKLVHSMVAH--LDAVTSLAV--DPQGLYILSGTY 115 (116)
Q Consensus 73 ----------~d~~i~~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~~~l~~~s~ 115 (116)
....|.+||+.+++.+..+... ......+.| +|++++++.++.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence 3689999999999888877642 134455555 999998877653
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.46 E-value=5.9e-06 Score=51.06 Aligned_cols=74 Identities=18% Similarity=0.349 Sum_probs=60.3
Q ss_pred EEEccCCCcEEEEeeC----------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe-CCCeE
Q psy17133 10 IDFVRDESTKMVTAFD----------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH-DDRHI 77 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~----------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-~d~~i 77 (116)
+.++| +++.+++... .+.|.+.|..+.+.+..+... .....+.++|+++ .+++.. .++.|
T Consensus 324 va~s~-dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-------~~P~gia~spDg~~~lyv~n~~s~~V 395 (426)
T 3c75_H 324 TAYHR-QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-------HEIDSINVSQDAEPLLYALSAGTQTL 395 (426)
T ss_dssp EEEEG-GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-------EEECEEEECCSSSCEEEEEETTTTEE
T ss_pred eEEcC-CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-------CCcCeEEEccCCCEEEEEEcCCCCeE
Confidence 68888 5565555432 347999999999999998755 3588999999998 888887 58999
Q ss_pred EEEECCCCeEEEEe
Q psy17133 78 RFFDNVSGKLVHSM 91 (116)
Q Consensus 78 ~~~~~~~~~~~~~~ 91 (116)
.++|..+++.+..+
T Consensus 396 sVID~~t~kvv~tI 409 (426)
T 3c75_H 396 HIYDAATGEELRSV 409 (426)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECCCCCEEEEe
Confidence 99999999999887
No 227
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.44 E-value=2.6e-06 Score=55.98 Aligned_cols=100 Identities=8% Similarity=-0.027 Sum_probs=63.6
Q ss_pred CceEEEEc-cCCCcEEEEeeC-C----CeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----
Q psy17133 6 TPTSIDFV-RDESTKMVTAFD-N----SACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---- 74 (116)
Q Consensus 6 ~v~~~~~~-~~~~~~l~~~~~-~----~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---- 74 (116)
.+....|+ | ++++|+.... + ..|+++|+.++ +.+.. .. ......+.|+||++.|+....+
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---~~-----~~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---KV-----SGTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---CE-----EEECSCCEECSSTTEEEEEEECTTCC
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---cc-----cCceeeEEEecCCCEEEEEEECCCCC
Confidence 35678999 9 7787765432 2 35999999987 53211 10 1123568899999877665544
Q ss_pred -CeEEEEECCCCeE--EEEee-cccccEEEEEECCCCcEEEeee
Q psy17133 75 -RHIRFFDNVSGKL--VHSMV-AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 75 -~~i~~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~s 114 (116)
..|..+++.++.. ...+. ........+.|+|||++|+..+
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 3688888876532 22222 2223456789999999987654
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.41 E-value=1e-06 Score=56.26 Aligned_cols=102 Identities=8% Similarity=0.049 Sum_probs=69.8
Q ss_pred CceEEEEccCCCcEEEEee-CCCeEEEEECCCCc------------eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133 6 TPTSIDFVRDESTKMVTAF-DNSACVLFDLETGK------------PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH 72 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 72 (116)
.+-++.++| +++++++++ .+..+.++|+.+.+ .+..++.. .....++|+|+|....+.-
T Consensus 278 ~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-------~gP~h~aF~~dG~aY~t~~ 349 (595)
T 1fwx_A 278 NPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-------LGPLHTAFDGRGNAYTSLF 349 (595)
T ss_dssp SCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-------SCEEEEEECTTSEEEEEET
T ss_pred CceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-------CCcceEEECCCCeEEEEEe
Confidence 456789999 677666554 68899999998543 22333222 4578999999994334455
Q ss_pred CCCeEEEEECCC----------CeEEEEeecccccE-----EEEEECCCCcEEEeeec
Q psy17133 73 DDRHIRFFDNVS----------GKLVHSMVAHLDAV-----TSLAVDPQGLYILSGTY 115 (116)
Q Consensus 73 ~d~~i~~~~~~~----------~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~s~ 115 (116)
.++.|..|++++ .+.+..+..+..+. ..+..+|||++|+++..
T Consensus 350 ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 350 LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 699999999976 45666666554422 12245899999988653
No 229
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.41 E-value=4.2e-05 Score=43.88 Aligned_cols=100 Identities=16% Similarity=0.118 Sum_probs=66.8
Q ss_pred EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133 12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 91 (116)
+.+ ++..|+.+..+.+|+++|..+.+.+..++....... -..++.+.+. +|++.+..-.+..|.+.|.++++.+..+
T Consensus 110 lt~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~-~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 110 LTS-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP-LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp EEE-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred Eee-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc-cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEE
Confidence 344 445555555688899999998888877765321000 1234566655 6665555556889999999999998887
Q ss_pred ecc-------------cccEEEEEECCCCcEEEeee
Q psy17133 92 VAH-------------LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 92 ~~~-------------~~~v~~~~~~~~~~~l~~~s 114 (116)
... ..-...++++|+++.|+.++
T Consensus 187 dl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 187 DLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 521 12568999999877666554
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.37 E-value=2.9e-05 Score=45.15 Aligned_cols=96 Identities=8% Similarity=-0.040 Sum_probs=61.9
Q ss_pred ceEEEEccCCCcEEEEeeC--CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEECC
Q psy17133 7 PTSIDFVRDESTKMVTAFD--NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFDNV 83 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~--~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~~~ 83 (116)
...+.|++ ++..+++.+. ++.|+++|..+++.+..+.... ......+.+. +..++. .-.++.+.++|..
T Consensus 23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-----~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-----SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-----TCCEEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-----CcceEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 46899998 5554444443 6799999999999888876431 1122344444 445544 4457899999999
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
+.+.+..+......-.. +++|++.++.
T Consensus 95 t~~v~~~i~~g~~~g~g--lt~Dg~~l~v 121 (266)
T 2iwa_A 95 TLSNIKNFTHQMKDGWG--LATDGKILYG 121 (266)
T ss_dssp TTEEEEEEECCSSSCCE--EEECSSSEEE
T ss_pred CCcEEEEEECCCCCeEE--EEECCCEEEE
Confidence 99998887532122233 4456665554
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.36 E-value=3.8e-05 Score=44.61 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=65.2
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH- 94 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~- 94 (116)
+++.|+.+..+..++++|..+.+.+..++....... -..++.+.+. +|++.+..-.++.|.+.|.++++.+..+...
T Consensus 144 Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~-v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 144 WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP-VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc-cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence 345666655678899999888888777765321000 1234566666 6766655556889999999999998887522
Q ss_pred ------------cccEEEEEECCCCcEEEeee
Q psy17133 95 ------------LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 95 ------------~~~v~~~~~~~~~~~l~~~s 114 (116)
..-...++++|+++.|+.++
T Consensus 222 L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 222 LTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp HHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 12568999999766555444
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.36 E-value=5.5e-05 Score=47.14 Aligned_cols=104 Identities=12% Similarity=0.081 Sum_probs=69.6
Q ss_pred ceEEEEccCCCcEEEEee-------------------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE--cCCC
Q psy17133 7 PTSIDFVRDESTKMVTAF-------------------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC--HPTL 65 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~-------------------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~ 65 (116)
.+.+-|+| +++.++++. ...+|.+||+.+++.+.++..... ......+.| +|++
T Consensus 190 ~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~----g~~P~~i~f~~~Pdg 264 (462)
T 2ece_A 190 AYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE----NRMALELRPLHDPTK 264 (462)
T ss_dssp CCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT----EEEEEEEEECSSTTC
T ss_pred cceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC----CCccceeEeeECCCC
Confidence 34577899 778777774 368999999998887777765311 123455655 9999
Q ss_pred CEEEEEe------CCCeEEEEECCCCeEE--EEe--ecc----------------cccEEEEEECCCCcEEEeeec
Q psy17133 66 PLTITAH------DDRHIRFFDNVSGKLV--HSM--VAH----------------LDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 66 ~~~~~~~------~d~~i~~~~~~~~~~~--~~~--~~~----------------~~~v~~~~~~~~~~~l~~~s~ 115 (116)
++++.++ .+++|.+|....++.. +.+ ... ......+.+++|+++|..+.+
T Consensus 265 ~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr 340 (462)
T 2ece_A 265 LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW 340 (462)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET
T ss_pred CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeC
Confidence 9887766 4568877766544321 111 110 134678999999999987654
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.34 E-value=8.2e-06 Score=53.24 Aligned_cols=78 Identities=9% Similarity=0.051 Sum_probs=56.8
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEECC
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVDP 105 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 105 (116)
+.++.||+.+++.+-.++.+. ....-.+...+.+++.++.|+.++.||.++|+.+..+..... ...-+.|..
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~-------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~ 527 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVT-------IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSV 527 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESS-------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred eeEEEEECCCCCeEeEccCCC-------CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEE
Confidence 679999999999888776552 222234455677889999999999999999999988764322 223466778
Q ss_pred CCcEEE
Q psy17133 106 QGLYIL 111 (116)
Q Consensus 106 ~~~~l~ 111 (116)
+|+..+
T Consensus 528 ~G~qyv 533 (689)
T 1yiq_A 528 DGEQYV 533 (689)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 887554
No 234
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.27 E-value=0.0001 Score=42.61 Aligned_cols=104 Identities=13% Similarity=0.060 Sum_probs=72.5
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+.+..++|+|+++.++++...++.|...|.. ++.+..+.-.. ......+++.+++.++++.-.++.+.++++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-----~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-----VKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-----CSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-----CCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 4688999999544455557778899999997 88777775331 24678899998888777766678899998754
Q ss_pred Ce---EEEEee------cccccEEEEEECCCCcEEEeee
Q psy17133 85 GK---LVHSMV------AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 85 ~~---~~~~~~------~~~~~v~~~~~~~~~~~l~~~s 114 (116)
.. .+.... ........++|+|.++.|.++.
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~ 139 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK 139 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE
Confidence 33 122221 1233468999999987776654
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.25 E-value=0.00011 Score=42.23 Aligned_cols=99 Identities=12% Similarity=0.010 Sum_probs=62.4
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECCCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~ 85 (116)
+..++|+++++..+++...++.|..++.........+... ......+++++++..+ ++-...+.|.++++...
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~------~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD------LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC------CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 4678888844445555556789999998755433333222 2467899999976544 45555789999998743
Q ss_pred eEEEEeecccccEEEEEECCCCcEEE
Q psy17133 86 KLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
...............++++|++..|+
T Consensus 112 ~~~~~~~~~~~~P~~i~vd~~~g~ly 137 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTDPVRGNLY 137 (267)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEE
T ss_pred CEEEEEECCCCCccEEEEeeCCCEEE
Confidence 32222222224678899999655544
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.23 E-value=2.1e-05 Score=51.26 Aligned_cols=78 Identities=8% Similarity=0.038 Sum_probs=56.4
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc-ccEEEEEECC
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL-DAVTSLAVDP 105 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~ 105 (116)
+.|..||..+++.+-.++.. .......+..++..++.++.++.+++||.++++.+..+.... ....-+.|..
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-------~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~ 529 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-------SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMV 529 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCC-------CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEe
Confidence 67999999999988777644 123334455677788888999999999999999998886332 2223455667
Q ss_pred CCcEEE
Q psy17133 106 QGLYIL 111 (116)
Q Consensus 106 ~~~~l~ 111 (116)
+|+.++
T Consensus 530 ~G~~~v 535 (677)
T 1kb0_A 530 DGRQYV 535 (677)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 877554
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.14 E-value=0.00016 Score=41.95 Aligned_cols=77 Identities=10% Similarity=-0.050 Sum_probs=55.1
Q ss_pred eEEEEccCCCcEEEEeeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEECCC
Q psy17133 8 TSIDFVRDESTKMVTAFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFDNVS 84 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~~ 84 (116)
..+.|+ ++.++.+.+.++ .|+++|+.+++.+..+... .......+.+++..++... .++.+.++|.++
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-------~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-------KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-------TTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-------CccceeEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence 677887 346666666655 8999999999988888654 2344444444555555544 488999999999
Q ss_pred CeEEEEeec
Q psy17133 85 GKLVHSMVA 93 (116)
Q Consensus 85 ~~~~~~~~~ 93 (116)
.+.+..+..
T Consensus 117 ~~~~~ti~~ 125 (262)
T 3nol_A 117 LRQVRSFNY 125 (262)
T ss_dssp CCEEEEEEC
T ss_pred CcEEEEEEC
Confidence 999988873
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.08 E-value=0.0003 Score=40.44 Aligned_cols=102 Identities=11% Similarity=-0.036 Sum_probs=63.3
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHIRFFD 81 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i~~~~ 81 (116)
..+..++++++++..+++....+.|.+++..... ...+.... ......++++|++..++.+.. .+.|..++
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~-----~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTG-----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS-----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECC-----CCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 4567889988444555555567889999986433 23332211 235789999997655544443 46888888
Q ss_pred CCCCeEEEEee-cccccEEEEEECCCCcEEEee
Q psy17133 82 NVSGKLVHSMV-AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 82 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+.. .....+. ........++++|++..|+.+
T Consensus 153 ~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 153 MDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp TTS-CCCEEEECTTCSCEEEEEEETTTTEEEEE
T ss_pred cCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEE
Confidence 763 3323222 223457889999987766544
No 239
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.04 E-value=0.00022 Score=46.57 Aligned_cols=99 Identities=8% Similarity=0.098 Sum_probs=60.8
Q ss_pred CceEEEEccCCCcEEEEee----CCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeC---CCe
Q psy17133 6 TPTSIDFVRDESTKMVTAF----DNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHD---DRH 76 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~----~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~---d~~ 76 (116)
....+.|+| ++++|+... ....++++|+.++. ....+..+ ....... +++++..++. ... .+.
T Consensus 235 ~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~------~~~~~~~-~~~~g~~l~~~t~~~~~~~~ 306 (693)
T 3iuj_A 235 RYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD------LDADVSL-VDNKGSTLYLLTNRDAPNRR 306 (693)
T ss_dssp SEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS------SSSCEEE-EEEETTEEEEEECTTCTTCE
T ss_pred EEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC------CCceEEE-EeccCCEEEEEECCCCCCCE
Confidence 356788999 677665433 23589999997653 34555544 2233333 5666665544 433 367
Q ss_pred EEEEECCCCeE--EEEeecccccEEEEEECCCCcEEEeee
Q psy17133 77 IRFFDNVSGKL--VHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 77 i~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
|..+++.++.. .+.+..+...+. .|+++++.|+...
T Consensus 307 l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 307 LVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp EEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred EEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE
Confidence 99999987653 234444544444 7888888876543
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.01 E-value=0.00032 Score=40.80 Aligned_cols=92 Identities=10% Similarity=-0.020 Sum_probs=61.1
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECCCCe
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~ 86 (116)
..+.|+. +.++.+.+.++.|+++|+++++.+..+ .. .......+.+++. +....-.++.+.++|.++.+
T Consensus 58 qGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-------~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 58 QGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RL-------GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-EC-------TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred ceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-------CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 5777764 466677778889999999999988877 33 2334433344444 44444458899999999999
Q ss_pred EEEEeecccccEEEEEECCCCcEEEe
Q psy17133 87 LVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 87 ~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.+.++... ..-..++ ++++.|+.
T Consensus 128 ~~~ti~~~-~eGwGLt--~Dg~~L~v 150 (268)
T 3nok_A 128 RERTTRYS-GEGWGLC--YWNGKLVR 150 (268)
T ss_dssp EEEEEECS-SCCCCEE--EETTEEEE
T ss_pred EEEEEeCC-CceeEEe--cCCCEEEE
Confidence 99888742 2223444 45555543
No 241
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.98 E-value=0.00079 Score=41.73 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=61.7
Q ss_pred CCceEEEEccCCCcEEEEeeC-CC----eEEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCe
Q psy17133 5 GTPTSIDFVRDESTKMVTAFD-NS----ACVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRH 76 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~-~~----~v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~ 76 (116)
..+..++|++ +++.|+++.. ++ .+..++.. +... ..+.. ......++++| ++.++++-..++.
T Consensus 179 ~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~-------~~~p~giavdp~~g~lyv~d~~~~~ 249 (430)
T 3tc9_A 179 SKVRTICWTH-EADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK-------GQNCNGAETHPINGELYFNSWNAGQ 249 (430)
T ss_dssp SCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE-------CSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc-------CCCceEEEEeCCCCEEEEEECCCCE
Confidence 4577899998 6775555442 21 34444433 3221 22221 13467888999 6777777767889
Q ss_pred EEEEECCCCeEEEEeec-ccccEEEEEECCCCcEEEee
Q psy17133 77 IRFFDNVSGKLVHSMVA-HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 77 i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 113 (116)
|..++...+........ .......++|+|++++|+.+
T Consensus 250 V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 250 VFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp EEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred EEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 99999987665333221 22357889999999965543
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.90 E-value=0.00056 Score=44.10 Aligned_cols=95 Identities=11% Similarity=0.081 Sum_probs=69.8
Q ss_pred CCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE-c-CCCCEEEEEe------------------CC
Q psy17133 16 ESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC-H-PTLPLTITAH------------------DD 74 (116)
Q Consensus 16 ~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~------------------~d 74 (116)
+++++..+. .+..|.+.|+.+.+....+.... ...+..+++ . |++.++++++ .+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-----g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-----AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-----CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-----CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 345665554 57789999999998777554321 135778887 5 8999888774 24
Q ss_pred CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133 75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d 116 (116)
+.+.+.|.++.+...++.... ....++++|+|+++++++.+
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~ 215 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYN 215 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESC
T ss_pred ceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecC
Confidence 579999999999888876322 45678899999999988753
No 243
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.87 E-value=5.9e-05 Score=45.66 Aligned_cols=90 Identities=10% Similarity=0.051 Sum_probs=53.4
Q ss_pred EEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC---CEEEEEeCCCeEEEEECCCCeE
Q psy17133 11 DFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL---PLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
.++| ++..+++++.++.++.||..+++.+..+.... .....+..+. ..++.++.++.+..||..+|+.
T Consensus 125 ~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 125 SLSP-STSLLYLGRTEYTITMYDTKTRELRWNATYFD--------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEE--------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cccc-cCCEEEEEecCCEEEEEECCCCCEEEeEeccc--------ccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 3455 55677777878889999988887665554321 1112223321 4566788899999999999998
Q ss_pred EEEeecccccEEEEEECCCCcE
Q psy17133 88 VHSMVAHLDAVTSLAVDPQGLY 109 (116)
Q Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~ 109 (116)
+.........+....+++++..
T Consensus 196 ~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 196 LWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp EEEEECSSCEEEEEECTTSSCE
T ss_pred EEEecCCCceEEEEEecCCceE
Confidence 8776633322334456667653
No 244
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.87 E-value=0.0012 Score=40.33 Aligned_cols=102 Identities=10% Similarity=0.015 Sum_probs=63.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~ 83 (116)
..+.+++|.+.++.++++-...+.|+.++.........+... ......+++++.+. +.++-...+.|.+.++.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~------~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d 189 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLD 189 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS------CSCCCCEEEETTTTEEEEEETTTTEEEECBTT
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC------CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC
Confidence 456788898744445555556788999998755433333322 23467888887654 45555567889988877
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.......+...-.....++++|.+..|+.
T Consensus 190 g~~~~~l~~~~l~~P~giavdp~~g~ly~ 218 (386)
T 3v65_B 190 GAHRKVLLWQSLEKPRAIALHPMEGTIYW 218 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCceEEeecCCCCCCcEEEEEcCCCeEEE
Confidence 44333333333346788899986665543
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.87 E-value=2.4e-05 Score=47.31 Aligned_cols=68 Identities=10% Similarity=0.092 Sum_probs=44.0
Q ss_pred CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133 16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 91 (116)
++..+++++.++.++.||..+|+.+..+... .+.+..+..++..+++++.|+.++.||.++|+.+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~--------~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKED--------PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECC--------CSCCCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCC--------CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 3478888899999999999999988777652 1222333456777777788999999999888765544
No 246
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.83 E-value=0.0013 Score=39.57 Aligned_cols=102 Identities=10% Similarity=0.015 Sum_probs=64.3
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~ 83 (116)
..+.+++|++.++..+++-...+.|+.++.........+... ......+++.+.+ .+.++-...+.|.+.++.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~------~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d 146 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLD 146 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC------CCCccEEEEecCCCeEEEEcCCCCeEEEEcCC
Confidence 346788898744445555556788999998755433333322 2346789999864 455555667899999987
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
...........-.....++++|.+..|+.
T Consensus 147 G~~~~~l~~~~l~~P~~iavdp~~g~ly~ 175 (349)
T 3v64_C 147 GAHRKVLLWQSLEKPRAIALHPMEGTIYW 175 (349)
T ss_dssp SCSCEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred CCceEEEEeCCCCCcceEEEecCcCeEEE
Confidence 44333333333346788999986655543
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.81 E-value=0.00068 Score=44.37 Aligned_cols=96 Identities=16% Similarity=0.158 Sum_probs=60.1
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcC----cCCCCc-------------------------eeEEEEcCCCCEE
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFG----VSGGGG-------------------------INRVVCHPTLPLT 68 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~----~~~~~~-------------------------i~~~~~~~~~~~~ 68 (116)
..++.++.++.++++|..+|+.+..++..... ....+. -..++++|+..++
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 56788889999999999999987766532100 000000 1256788887777
Q ss_pred EEEeC-------------------------------------------CCeEEEEECCCCeEEEEeecccccEEEEEECC
Q psy17133 69 ITAHD-------------------------------------------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP 105 (116)
Q Consensus 69 ~~~~~-------------------------------------------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 105 (116)
++... .+.|..||+.+++.+..... ...+....+..
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~ 486 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTT 486 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEE
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEe
Confidence 66432 16899999999998877652 22233333444
Q ss_pred CCcEEEeee
Q psy17133 106 QGLYILSGT 114 (116)
Q Consensus 106 ~~~~l~~~s 114 (116)
.+..++.++
T Consensus 487 ~g~~v~~g~ 495 (677)
T 1kb0_A 487 AGNVVFQGT 495 (677)
T ss_dssp TTTEEEEEC
T ss_pred CCCEEEEEC
Confidence 555555544
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.78 E-value=0.00038 Score=44.65 Aligned_cols=80 Identities=18% Similarity=0.049 Sum_probs=52.7
Q ss_pred CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEEC
Q psy17133 26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVD 104 (116)
Q Consensus 26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~ 104 (116)
++.+..||..+++.+-+++... .+....+...+..++.++.|+.++.+|.++++.+..+..... ...-+.+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~-------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~ 515 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKF-------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYS 515 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESS-------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCC-------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEE
Confidence 4789999999998877775431 112222223456777788999999999999999988763321 11223455
Q ss_pred CCCcEEEe
Q psy17133 105 PQGLYILS 112 (116)
Q Consensus 105 ~~~~~l~~ 112 (116)
.+++.++.
T Consensus 516 ~~G~~yv~ 523 (571)
T 2ad6_A 516 FKGKQYIG 523 (571)
T ss_dssp ETTEEEEE
T ss_pred ECCEEEEE
Confidence 77776554
No 249
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.72 E-value=0.0019 Score=38.30 Aligned_cols=102 Identities=9% Similarity=-0.029 Sum_probs=61.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCC---CceeEE-EecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLET---GKPVVR-IDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRF 79 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~---~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~ 79 (116)
..+.+++|++.++..+++-..++.|+.++... +..... +... ......+++++.+. +.++-...+.|.+
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~------~~~p~glavd~~~~~ly~~d~~~~~I~~ 103 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVLGTVSV 103 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC------CCCcCEEEEeecCCeEEEEECCCCEEEE
Confidence 45678899884444555555678899999875 122222 2222 23467899987554 4455566889999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.+...................++++|.+..|+.
T Consensus 104 ~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~ 136 (316)
T 1ijq_A 104 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 136 (316)
T ss_dssp EETTSSSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred EeCCCCceEEEEECCCCCcceEEeCCCCCEEEE
Confidence 998744333333323346788999986665543
No 250
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.72 E-value=0.0012 Score=43.66 Aligned_cols=72 Identities=7% Similarity=-0.035 Sum_probs=46.7
Q ss_pred eEEEEccCCCcEEEEeeCC-----CeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeE
Q psy17133 8 TSIDFVRDESTKMVTAFDN-----SACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHI 77 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i 77 (116)
..+.|+| +++.|+....+ .+|+++++.+++. +..+.... ......+.|+||+++|+.... ...|
T Consensus 224 ~~~~Wsp-Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~-----~~~~~~~~~SpDg~~l~~~~~~~~~~~l 297 (751)
T 2xe4_A 224 GEIVWGP-DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHN-----PLFSAFMYKAADTNTLCIGSQSPETAEV 297 (751)
T ss_dssp SCCEECS-STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCC-----TTCEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred eeEEEec-CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCC-----CceEEEEEECCCCCEEEEEecCCCCceE
Confidence 4678999 66666665543 3688888876642 23333221 234567899999998776542 4568
Q ss_pred EEEECCCC
Q psy17133 78 RFFDNVSG 85 (116)
Q Consensus 78 ~~~~~~~~ 85 (116)
.++|+.++
T Consensus 298 ~~~d~~~~ 305 (751)
T 2xe4_A 298 HLLDLRKG 305 (751)
T ss_dssp EEEESSSC
T ss_pred EEEECCCC
Confidence 88998765
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.71 E-value=0.00091 Score=39.26 Aligned_cols=92 Identities=9% Similarity=0.066 Sum_probs=59.4
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL 87 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 87 (116)
.++...+ ++ .+..++.++.+..+|.. ++.+..+... ...+..+...+++.+++.. +.+..+| .+++.
T Consensus 140 ~~~~~~~-~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~------~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~ 206 (330)
T 3hxj_A 140 ATPIVSE-DG-TIYVGSNDNYLYAINPD-GTEKWRFKTN------DAITSAASIGKDGTIYFGS---DKVYAIN-PDGTE 206 (330)
T ss_dssp SCCEECT-TS-CEEEECTTSEEEEECTT-SCEEEEEECS------SCCCSCCEECTTCCEEEES---SSEEEEC-TTSCE
T ss_pred eeeEEcC-CC-EEEEEcCCCEEEEECCC-CCEeEEEecC------CCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcE
Confidence 3444444 33 45566777889999988 7766666544 3356666777777755443 7788888 67776
Q ss_pred EEEeecccccEEEEEECCCCcEEEe
Q psy17133 88 VHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
+.........+.++...+++...+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~l~v~ 231 (330)
T 3hxj_A 207 KWNFYAGYWTVTRPAISEDGTIYVT 231 (330)
T ss_dssp EEEECCSSCCCSCCEECTTSCEEEE
T ss_pred EEEEccCCcceeceEECCCCeEEEE
Confidence 6665544455667777777665543
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.67 E-value=0.0022 Score=37.66 Aligned_cols=93 Identities=12% Similarity=-0.035 Sum_probs=59.7
Q ss_pred ccCCCcE-EEEeeCCCeEEEEECCC-Cce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy17133 13 VRDESTK-MVTAFDNSACVLFDLET-GKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV 88 (116)
Q Consensus 13 ~~~~~~~-l~~~~~~~~v~i~~~~~-~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 88 (116)
+| ++.. +++-...+.|..++... ++. ...+... .....++++++|.++++....+.|.+++.. ++..
T Consensus 175 s~-dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-------~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~ 245 (306)
T 2p4o_A 175 KR-FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-------TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTT 245 (306)
T ss_dssp EE-ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-------CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEE
T ss_pred Cc-CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-------CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEE
Confidence 66 4444 45555678899999864 321 1122111 235678999999887777778899999975 6653
Q ss_pred EE--eecccccEEEEEEC---CCCcEEEeee
Q psy17133 89 HS--MVAHLDAVTSLAVD---PQGLYILSGT 114 (116)
Q Consensus 89 ~~--~~~~~~~v~~~~~~---~~~~~l~~~s 114 (116)
.. +........+++|. |+++.|+.++
T Consensus 246 ~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 246 IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred EEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 32 22223468899998 8877766543
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.67 E-value=0.00054 Score=44.09 Aligned_cols=79 Identities=19% Similarity=0.131 Sum_probs=52.6
Q ss_pred CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc-EEEEEEC
Q psy17133 26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA-VTSLAVD 104 (116)
Q Consensus 26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~ 104 (116)
.+.+..||..+++.+-+.+... ....-.+...+.+++.++.|+.++.+|.++|+.+..+...... ..-+.|.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-------~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~ 537 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWE 537 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-------CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-------CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEE
Confidence 5789999999998877665431 1111111224667778999999999999999999887743321 1225566
Q ss_pred CCCcEEE
Q psy17133 105 PQGLYIL 111 (116)
Q Consensus 105 ~~~~~l~ 111 (116)
.+|+..+
T Consensus 538 ~~G~qYv 544 (582)
T 1flg_A 538 QDGEQYL 544 (582)
T ss_dssp ETTEEEE
T ss_pred ECCEEEE
Confidence 7877543
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.66 E-value=0.0026 Score=38.27 Aligned_cols=100 Identities=14% Similarity=0.010 Sum_probs=61.8
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-eCC-CeEEEEECC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-HDD-RHIRFFDNV 83 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d-~~i~~~~~~ 83 (116)
.+..+++.+.++.++++-...+.|.+.+.........+... -.....++++|.+..++.. ... +.|...++.
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~------l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS------LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT------CSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC------CCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 45678887645555566666778999988743322223222 2457899999976555444 444 788888876
Q ss_pred CCeEEEEe-ecccccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVHSM-VAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.. ....+ ...-.....++++|++..|..
T Consensus 191 G~-~~~~~~~~~~~~PnGla~d~~~~~lY~ 219 (349)
T 3v64_C 191 GS-GRRIIADTHLFWPNGLTIDYAGRRMYW 219 (349)
T ss_dssp SC-SCEESCCSSCSCEEEEEEETTTTEEEE
T ss_pred CC-CcEEEEECCCCCcceEEEeCCCCEEEE
Confidence 33 33333 222345788999987666554
No 255
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.66 E-value=0.003 Score=38.78 Aligned_cols=103 Identities=9% Similarity=-0.045 Sum_probs=63.3
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR 78 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~ 78 (116)
.+.+.+++|++.++..+++-...+.|+.+++... .....+... ......+++.+. +.+.++-...+.|.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~------~~~p~glavD~~~~~lY~~d~~~~~I~ 184 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVLGTVS 184 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS------CSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC------CCCcccEEEEecCCceEEEECCCCeEE
Confidence 3567788998844444455456788888888642 122222222 345788999985 45555656678999
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
+.++........+...-.....++++|.+..|+.
T Consensus 185 ~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 185 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 218 (400)
T ss_dssp EECTTTCSEEEEEECSSCCEEEEEEETTTTEEEE
T ss_pred EEeCCCCceEEEEeCCCCCcceEEEecccCeEEE
Confidence 9998755444334333445788999986555543
No 256
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.65 E-value=0.0017 Score=38.13 Aligned_cols=86 Identities=6% Similarity=0.037 Sum_probs=59.4
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA 97 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 97 (116)
..+..++.++.+..+|.. ++........ ...+..+...+++. +..++.++.+..+|.. ++.+..+......
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~------~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTK------KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI 178 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECS------SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCC------CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc
Confidence 456667778899999988 7766666544 33456666777776 5556678999999988 8776666544445
Q ss_pred EEEEEECCCCcEEEe
Q psy17133 98 VTSLAVDPQGLYILS 112 (116)
Q Consensus 98 v~~~~~~~~~~~l~~ 112 (116)
+..+...+++..++.
T Consensus 179 ~~~~~~d~~g~l~v~ 193 (330)
T 3hxj_A 179 TSAASIGKDGTIYFG 193 (330)
T ss_dssp CSCCEECTTCCEEEE
T ss_pred eeeeEEcCCCEEEEE
Confidence 666677777776543
No 257
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.62 E-value=0.0047 Score=40.63 Aligned_cols=81 Identities=14% Similarity=0.137 Sum_probs=54.6
Q ss_pred EEEEccCCCcEEEEeeCCC-------------------eEEEEECCCCceeEEEecCCcC---cCCCCceeEEEEcCCCC
Q psy17133 9 SIDFVRDESTKMVTAFDNS-------------------ACVLFDLETGKPVVRIDSSQFG---VSGGGGINRVVCHPTLP 66 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~-------------------~v~i~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~ 66 (116)
.+.++| +...++.+..++ .|..+|..+|+.+-.++..... ......+.......+++
T Consensus 239 ~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 567888 567777777665 3999999999988877642100 00012222233333554
Q ss_pred ---EEEEEeCCCeEEEEECCCCeEEEE
Q psy17133 67 ---LTITAHDDRHIRFFDNVSGKLVHS 90 (116)
Q Consensus 67 ---~~~~~~~d~~i~~~~~~~~~~~~~ 90 (116)
.++.++.++.++++|.++|+.+..
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEecc
Confidence 788888999999999999998754
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.58 E-value=0.004 Score=38.04 Aligned_cols=101 Identities=14% Similarity=-0.003 Sum_probs=60.6
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CC-CeEEEEECC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DD-RHIRFFDNV 83 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d-~~i~~~~~~ 83 (116)
.+..+++.+.++.++++-...+.|.+.++........+... ......++++|.+..++... .. +.|..+++.
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~------l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS------LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS------CSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC------CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 34567777644455555556677888887643322233222 24678999999766555444 34 688888876
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
...........-.....++++|++..|+.
T Consensus 234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~ 262 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNGLTIDYAGRRMYW 262 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEEGGGTEEEE
T ss_pred CCCcEEEEECCCCCeeeEEEeCCCCEEEE
Confidence 43333222223345788999987665554
No 259
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.53 E-value=0.004 Score=36.90 Aligned_cols=101 Identities=13% Similarity=0.008 Sum_probs=62.8
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C-CeEEEEECC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D-RHIRFFDNV 83 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d-~~i~~~~~~ 83 (116)
.+..+++.+.+++..++-...+.|.+++.........+... ......++++|.+..++.... . +.|...++.
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~------~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT------TCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC------CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 45778887634455555566788999998743332223322 246789999997665555443 3 688888876
Q ss_pred CCeEEEEee-cccccEEEEEECCCCcEEEee
Q psy17133 84 SGKLVHSMV-AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 84 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 113 (116)
|.....+. ..-.....+++++++..|+.+
T Consensus 152 -G~~~~~~~~~~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 152 -GVDIYSLVTENIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp -SCCEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred -CCCeEEEEECCCCCceEEEEeccCCEEEEE
Confidence 44333332 233467889999877666543
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.52 E-value=0.004 Score=36.77 Aligned_cols=104 Identities=12% Similarity=0.064 Sum_probs=61.8
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeC-----------
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHD----------- 73 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~----------- 73 (116)
.+..+.+.+++ ..|+++.....+..++..+++ +..+...... ........+++.+ +|.+.++-..
T Consensus 81 ~p~gi~~~~~~-g~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~-~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 81 RTYDISYNLQN-NQLYIVDCYYHLSVVGSEGGH-ATQLATSVDG-VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CEEEEEEETTT-TEEEEEETTTEEEEECTTCEE-CEEEESEETT-EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCceEEEcCCC-CcEEEEECCCCEEEEeCCCCE-EEEecccCCC-CcccccceEEEecCCCEEEEECCccccccccccee
Confidence 46788888623 445555444568888876443 2223211000 0013468899999 8987766432
Q ss_pred ------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 74 ------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 74 ------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
++.|..++..+++...... .......++++|+++.|+.+
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVA 202 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEE
T ss_pred hcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEE
Confidence 3678888987776543322 22345678999999866543
No 261
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.43 E-value=0.0074 Score=37.68 Aligned_cols=105 Identities=14% Similarity=0.246 Sum_probs=69.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc------------eeEEEecCCcCcCCCCceeEEEEcCC---CCEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK------------PVVRIDSSQFGVSGGGGINRVVCHPT---LPLTI 69 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~ 69 (116)
+.+..+..+| +|++|+..+ +..|.+..+..+. ..+.+.........+..|..+.|||- +..++
T Consensus 66 ~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LV 143 (452)
T 3pbp_A 66 DDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIV 143 (452)
T ss_dssp CTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEE
T ss_pred CceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEE
Confidence 3577899999 888888776 5588888887332 11223221100011467999999994 56899
Q ss_pred EEeCCCeEEEEECCCCe--EEEEee---------cccccEEEEEECCCCcEEEe
Q psy17133 70 TAHDDRHIRFFDNVSGK--LVHSMV---------AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 70 ~~~~d~~i~~~~~~~~~--~~~~~~---------~~~~~v~~~~~~~~~~~l~~ 112 (116)
+...|+.|++||+.... +. .+. .....+.+++|.+++-.|..
T Consensus 144 VLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 144 VLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp EEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred EEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 99999999999987421 11 221 12246889999998776654
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.41 E-value=0.0051 Score=35.38 Aligned_cols=92 Identities=12% Similarity=0.012 Sum_probs=60.2
Q ss_pred ceEEEEccCCCcEEEEeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEECC
Q psy17133 7 PTSIDFVRDESTKMVTAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFDNV 83 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~~~ 83 (116)
...+.|++ +.++.+.+.. ..|+.+|+.+++.+...... .......+.+.+..++. .-.++.+.++|.+
T Consensus 23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-------~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVP-------PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-------TTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-------CCcceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 45788875 3555555554 58999999999998888654 23333434444444444 4458899999999
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEE
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYI 110 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l 110 (116)
+.+.+..+... ..-..++ +++..|
T Consensus 94 tl~~~~ti~~~-~~Gwglt--~dg~~L 117 (243)
T 3mbr_X 94 TLTPRARFRYP-GEGWALT--SDDSHL 117 (243)
T ss_dssp TTEEEEEEECS-SCCCEEE--ECSSCE
T ss_pred cCcEEEEEeCC-CCceEEe--eCCCEE
Confidence 99999888743 2334454 344433
No 263
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.41 E-value=0.0073 Score=37.09 Aligned_cols=102 Identities=10% Similarity=-0.032 Sum_probs=63.4
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEEEECC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRFFDNV 83 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~~~~~ 83 (116)
.+..+++.+.++++.++-...+.|.+.++........+... ......++++|.+..++.... .+.|...++.
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~------~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECS------SCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCC------CCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 45677777634455555566778888888744433333322 345789999997665555442 4678888876
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
...........-.....+++++++..|+.+
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEE
Confidence 433333333233567889999877766543
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.39 E-value=0.0071 Score=36.42 Aligned_cols=110 Identities=15% Similarity=0.080 Sum_probs=69.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE-EecCCcCcCCCCceeEEEE---cCCCCEEEEEe--------
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR-IDSSQFGVSGGGGINRVVC---HPTLPLTITAH-------- 72 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~-------- 72 (116)
-...++.|.+.++.++++.-..+.|..|+...+..... +..-.........+..+.+ .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 34678899874444445444789999999875543322 2210000000124678999 68888777544
Q ss_pred -----CCCeEEEEECC---CCeEEEEee--c-----------ccccEEEEEECCCCcEEEeee
Q psy17133 73 -----DDRHIRFFDNV---SGKLVHSMV--A-----------HLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 73 -----~d~~i~~~~~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~~s 114 (116)
.+..+..+|+. +++.+.... . .......++..++|+..++++
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s 155 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA 155 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Confidence 26789999998 777655443 1 112478999999999888765
No 265
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.39 E-value=0.0067 Score=36.13 Aligned_cols=100 Identities=7% Similarity=-0.055 Sum_probs=61.5
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCCCCEEEEEe--CCCeEEEEEC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPTLPLTITAH--DDRHIRFFDN 82 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~d~~i~~~~~ 82 (116)
.+..+++.+.++..+++-...+.|.+++.... ....+. .. ......++++|.+..++... ..+.|...++
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~-~~~~l~~~~------~~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 152 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQE------LDQPRAIALDPSSGFMYWTDWGEVPKIERAGM 152 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSS------CSSEEEEEEEGGGTEEEEEECSSSCEEEEEET
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCC-cEEEEEeCC------CCCccEEEEeCCCCEEEEEecCCCCEEEEEEc
Confidence 45567777644555566566778888888643 333332 22 34678999999766555554 3578888887
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
............-.....++++|++..|+.
T Consensus 153 dG~~~~~~~~~~l~~Pnglavd~~~~~lY~ 182 (318)
T 3sov_A 153 DGSSRFIIINSEIYWPNGLTLDYEEQKLYW 182 (318)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCCeEEEEECCCCCccEEEEeccCCEEEE
Confidence 633222222222345788999987666554
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.38 E-value=0.0021 Score=42.09 Aligned_cols=76 Identities=11% Similarity=0.106 Sum_probs=51.6
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc-EEEEEECC
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA-VTSLAVDP 105 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~ 105 (116)
+.|..||..+++.+-..+... ......+...+.+++.++.++.++.||.++++.+..+...... ..-+.+..
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~-------~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~ 510 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPT-------HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL 510 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESS-------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred ceEEEEeCCCCcEEEEccCCC-------CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEE
Confidence 779999999998877766441 2222333446778888999999999999999998887643211 11233445
Q ss_pred CCcE
Q psy17133 106 QGLY 109 (116)
Q Consensus 106 ~~~~ 109 (116)
+|+.
T Consensus 511 ~G~~ 514 (668)
T 1kv9_A 511 AGRQ 514 (668)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6653
No 267
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.37 E-value=0.0075 Score=36.38 Aligned_cols=102 Identities=15% Similarity=0.288 Sum_probs=59.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcCC---CCEEEEEeC-C----
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHPT---LPLTITAHD-D---- 74 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~-d---- 74 (116)
..+..++|.| ++.+++ +...+.|++++ +++.. ..+... .........++++|+ +..++.+.. .
T Consensus 31 ~~P~~ia~~p-dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~---~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLI-AERPGRIRLFR--EGRLSTYAELSVY---HRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECT-TSCEEE-EETTTEEEEEE--TTEEEEEEECCCC---CSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCceEEEEcC-CCeEEE-EeCCCeEEEEE--CCCccEeecceEe---ecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 4567899999 677544 45568999998 34321 122110 001346889999998 444444332 2
Q ss_pred -CeEEEEECCCCeE------EEEee---cccccEEEEEECCCCcEEEee
Q psy17133 75 -RHIRFFDNVSGKL------VHSMV---AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 75 -~~i~~~~~~~~~~------~~~~~---~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+.|..++...+.. +..+. ........++|.|+|...++.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 6787888764321 11122 111234689999999876654
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.36 E-value=0.0062 Score=35.27 Aligned_cols=107 Identities=10% Similarity=0.091 Sum_probs=63.6
Q ss_pred CCCceEEEEccCCCcEEEEeeCCC--eEEEEEC-CCCceeEEEecCC-cCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNS--ACVLFDL-ETGKPVVRIDSSQ-FGVSGGGGINRVVCHPT-LPLTITAHDDRHIR 78 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~--~v~i~~~-~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~ 78 (116)
+.....++|+| .++.|.++.+.. .++.|+- ...+.+..+.... ........+..++++|. +.+++.....+.+.
T Consensus 120 N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~ 198 (255)
T 3qqz_A 120 NCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQ 198 (255)
T ss_dssp SSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEE
Confidence 34468999999 566666665543 4455541 1111222221100 00001235789999997 55667777788999
Q ss_pred EEECCCCeEEEEeeccc---------ccEEEEEECCCCcEEEe
Q psy17133 79 FFDNVSGKLVHSMVAHL---------DAVTSLAVDPQGLYILS 112 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~ 112 (116)
.+|.+ ++.+..+.-.. .....++|.++|+..++
T Consensus 199 ~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 199 EVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp EECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE
T ss_pred EEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE
Confidence 99976 66655554221 25689999999986655
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.32 E-value=0.0094 Score=37.07 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=57.4
Q ss_pred CCceEEEEccCCCcEEEEeeCC---Ce-EEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDN---SA-CVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~---~~-v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~ 78 (116)
..+..+++++ +++++++...+ .. +...+...+.. ...+. . -.....++++| ++.+.++-..++.|+
T Consensus 182 ~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~------~~~P~giavd~~~G~lyv~d~~~~~V~ 253 (433)
T 4hw6_A 182 GQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-N------ARGAKTCAVHPQNGKIYYTRYHHAMIS 253 (433)
T ss_dssp SCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-E------CSSBCCCEECTTTCCEEECBTTCSEEE
T ss_pred CCccEEEECC-CCCEEEEcCCCCcccceEEEEECCCCeecccccc-c------cCCCCEEEEeCCCCeEEEEECCCCEEE
Confidence 3467888988 66644443321 12 33333322211 11121 1 23467788999 677666666788999
Q ss_pred EEECCCCeEEEEe-e-cccccEEEEEECCCCcEEEee
Q psy17133 79 FFDNVSGKLVHSM-V-AHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 79 ~~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.++..++.....+ . ........++|+|++++|+.+
T Consensus 254 ~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 254 SYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp EECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred EEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 9998877663332 2 112233569999999855543
No 270
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.29 E-value=0.017 Score=38.77 Aligned_cols=103 Identities=10% Similarity=-0.041 Sum_probs=64.5
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEEEEC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRFFDN 82 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~~~~ 82 (116)
..+..+++.+.+++++++-...+.|.+.++.... ...+.... ......|+++|....|+.... .+.|...++
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~-----l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREN-----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECT-----TCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCC-----CCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 4566788877344555666677889999987443 33333221 245889999998655555443 378888888
Q ss_pred CCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
............-.....|++++....|+.+
T Consensus 545 dG~~~~~lv~~~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 545 NGVDIYSLVTENIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp TSCCEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCCceEEEEeCCCCCceEEEEecCCCeEEEE
Confidence 7443333333333567889998766665543
No 271
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.29 E-value=0.017 Score=38.77 Aligned_cols=102 Identities=9% Similarity=-0.030 Sum_probs=61.6
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRF 79 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~ 79 (116)
..+.+++|.+.++.++++-...+.|+.+++... .....+... ......+++.+.+. +.++-...+.|.+
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~------l~~P~GLAvD~~~~~LY~tD~~~~~I~v 497 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVLGTVSV 497 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC------CCCcceeeeeecCCcEEEEecCCCeEEE
Confidence 456778888744444455555677888887642 222222222 24577899998765 4455556789999
Q ss_pred EECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.++........+.........|+++|....|+.
T Consensus 498 ~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYw 530 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 530 (791)
T ss_dssp EETTSSSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred EeCCCCeEEEEEeCCCCCcceEEEecCCCCEEE
Confidence 998754443333333446788999987555543
No 272
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.26 E-value=0.011 Score=35.80 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=59.3
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCC---CCEEEEEeC----C--
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPT---LPLTITAHD----D-- 74 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~----d-- 74 (116)
..+..++|.| ++.+++ +...+.|++++. +++ .+..+.... ........++++|+ +..++.... +
T Consensus 29 ~~P~~ia~~p-dG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~---~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLV-TERPGRLVLISP-SGKKLVASFDVAN---VGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp SCEEEEEEEE-TTEEEE-EETTTEEEEECS-SCEEEEEECCCCC---STTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCeEEEEcC-CCeEEE-EeCCCEEEEEeC-CCceEeeccceee---cCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 4578899999 666444 455689999873 454 222221100 00346889999997 444443332 3
Q ss_pred --CeEEEEECCCC--e---E--E-EEeec-ccccEEEEEECCCCcEEEee
Q psy17133 75 --RHIRFFDNVSG--K---L--V-HSMVA-HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 75 --~~i~~~~~~~~--~---~--~-~~~~~-~~~~v~~~~~~~~~~~l~~~ 113 (116)
+.|..++.... . . + ..+.. .......++|.|+|.++++.
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 56777776543 1 1 1 11221 11234679999999877764
No 273
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.22 E-value=0.0077 Score=34.34 Aligned_cols=99 Identities=7% Similarity=-0.132 Sum_probs=61.6
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee-----EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV-----VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF 80 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~ 80 (116)
.+..++|+| ++.+.++ .++.++..+..+.+.. .+..+... -.....+.+.|++.+.++ .|+.|.-+
T Consensus 42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~G----w~~F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGG----WNQFQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSC----GGGCSEEEECTTSCEEEE--ETTEEEEE
T ss_pred cceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccc----cccceEEEECCCCCEEEe--CCCEEEEe
Confidence 567899999 7786666 6778887776542211 11111101 123578999999988877 45888877
Q ss_pred ECCCCe-------EEEEeecccccEEEEEECCCCcEEEee
Q psy17133 81 DNVSGK-------LVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 81 ~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
+..+.. ....-...-..+..+.|.|+|.+.+..
T Consensus 113 ~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 113 SPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp SCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred CCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 754311 111111123467889999999887665
No 274
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.19 E-value=0.012 Score=34.81 Aligned_cols=105 Identities=12% Similarity=0.142 Sum_probs=63.7
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC--------------cCCCCceeEEEEcC-CCCEEEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG--------------VSGGGGINRVVCHP-TLPLTIT 70 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~--------------~~~~~~i~~~~~~~-~~~~~~~ 70 (116)
.+.++.|.+ +++.+.++..++.|..|+..+++. ..+...... ......+..+++.+ ++.+++
T Consensus 20 ~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v- 96 (322)
T 2fp8_A 20 APNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI- 96 (322)
T ss_dssp CCCCEECCT-TCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-
T ss_pred CceEEEEcC-CCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-
Confidence 467788988 677777888889999999875443 333211000 00012468899998 565444
Q ss_pred EeCCCeEEEEECCCCeEEEEeec----ccccEEEEEECC-CCcEEEee
Q psy17133 71 AHDDRHIRFFDNVSGKLVHSMVA----HLDAVTSLAVDP-QGLYILSG 113 (116)
Q Consensus 71 ~~~d~~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~ 113 (116)
+...+.+..++..+++....... .......+++.+ +|+.+++.
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEEC
Confidence 44445588888775543221111 113467899999 99877653
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.19 E-value=0.015 Score=37.89 Aligned_cols=101 Identities=10% Similarity=0.038 Sum_probs=61.8
Q ss_pred EEEEccCCCcEEEEeeCCC-----------eEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C
Q psy17133 9 SIDFVRDESTKMVTAFDNS-----------ACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D 74 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~-----------~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d 74 (116)
..++.+.+++.++.|+.+. .+.+||..+++. +..+.... ......+++.+++++++.|+. +
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~-----~~~~~~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH-----DMFCPGISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC-----CCSSCEEEECTTSCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC-----CCccccccCCCCCCEEEeCCCCC
Confidence 4555653556777765322 578899887653 33333221 223445777889998888874 5
Q ss_pred CeEEEEECCCCeEEEEeeccccc-EEEEEECCCCcEEEeee
Q psy17133 75 RHIRFFDNVSGKLVHSMVAHLDA-VTSLAVDPQGLYILSGT 114 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~s 114 (116)
..+.+||..+.+-...-.....+ -..++..+++++++.|+
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeC
Confidence 68999999877654332211111 23455667888888877
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.18 E-value=0.012 Score=34.99 Aligned_cols=99 Identities=14% Similarity=0.106 Sum_probs=59.6
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEECCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~~ 84 (116)
+.+++|.+.++..+.+-...+.|+.++...... ...+... -.....+++.+.+ .+.++-...+.|.++++..
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~------l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG------LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC------CCCccEEEEEcCCCeEEEEECCCCEEEEEECCC
Confidence 457788874445555555677888888875432 1222222 2346788998754 4555556678999999874
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
................++++|.+..|+
T Consensus 111 ~~~~~l~~~~~~~P~giavdp~~g~ly 137 (318)
T 3sov_A 111 SLRKVLFWQELDQPRAIALDPSSGFMY 137 (318)
T ss_dssp CSCEEEECSSCSSEEEEEEEGGGTEEE
T ss_pred CcEEEEEeCCCCCccEEEEeCCCCEEE
Confidence 333222323334567888887654444
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.16 E-value=0.014 Score=35.16 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=68.2
Q ss_pred ceEEEE---ccCCCcEEEEee-------------CCCeEEEEECC---CCceeEEEecCCcCcC-------CCCceeEEE
Q psy17133 7 PTSIDF---VRDESTKMVTAF-------------DNSACVLFDLE---TGKPVVRIDSSQFGVS-------GGGGINRVV 60 (116)
Q Consensus 7 v~~~~~---~~~~~~~l~~~~-------------~~~~v~i~~~~---~~~~~~~~~~~~~~~~-------~~~~i~~~~ 60 (116)
+..+.| .| ++.++++.. .+..+..||+. +++.+....-.....+ .......++
T Consensus 65 ~sGl~~~~~D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 65 MSGLSLLTHDN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEESSSSS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeEEEEeccCC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 578899 58 556666533 15779999998 7776655442100000 013478999
Q ss_pred EcCCCCEEEEEeCC-CeEEEEECCCCeEEEEeec------ccccEEEEEECCCCcEEEee
Q psy17133 61 CHPTLPLTITAHDD-RHIRFFDNVSGKLVHSMVA------HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 61 ~~~~~~~~~~~~~d-~~i~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~ 113 (116)
..++|...++.+.. +.|...+.. ++.+..+.. .......|+++|+++.|+..
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~ 202 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAF 202 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEE
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEE
Confidence 99999988888877 888888866 333333221 11236689999999888754
No 278
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.13 E-value=0.02 Score=36.40 Aligned_cols=99 Identities=20% Similarity=0.226 Sum_probs=60.4
Q ss_pred CceEEEE-------ccCCCcEEEEeeCCC-------eEEEEECCC-Ccee-----EEEecCCcCcCCCCceeEEEEcCC-
Q psy17133 6 TPTSIDF-------VRDESTKMVTAFDNS-------ACVLFDLET-GKPV-----VRIDSSQFGVSGGGGINRVVCHPT- 64 (116)
Q Consensus 6 ~v~~~~~-------~~~~~~~l~~~~~~~-------~v~i~~~~~-~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~- 64 (116)
.+..++| ++ +++.|+++...+ .+.+++... +... ..+... .....++++|+
T Consensus 187 ~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-------~~p~giavdp~~ 258 (496)
T 3kya_A 187 RIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-------KQCNGATIHPIN 258 (496)
T ss_dssp BEEEEEECCCBTTTBC-TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-------SCCCCEEECTTT
T ss_pred CCcEEEEeecccccCC-CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-------CCceEEEEcCCC
Confidence 4788999 98 667565554332 366665443 2221 222211 24567888995
Q ss_pred CCEEEEEeCCCeEEEEECC-------CCeE-----------EEE-ee-cccccEEEEEECCCCcEEEe
Q psy17133 65 LPLTITAHDDRHIRFFDNV-------SGKL-----------VHS-MV-AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 65 ~~~~~~~~~d~~i~~~~~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~~~~~~l~~ 112 (116)
+.++++-..++.|..+|+. ++.. ... +. ........++|+|++++|+.
T Consensus 259 g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYv 326 (496)
T 3kya_A 259 GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYF 326 (496)
T ss_dssp CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEE
Confidence 5566667778899999987 5543 222 22 22345678999999995443
No 279
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.12 E-value=0.0099 Score=35.75 Aligned_cols=69 Identities=7% Similarity=0.086 Sum_probs=45.3
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA 93 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 93 (116)
..++.++.++.+..+|..+++.+....... ......... .+..++.++.++.+..+|.++++.+.....
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~-----~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLL-----HRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTT-----TSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccC-----CCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 455566667788888888887666554210 111222222 245778888899999999999998876654
No 280
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.12 E-value=0.014 Score=34.33 Aligned_cols=76 Identities=11% Similarity=0.091 Sum_probs=52.6
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC--CeEEEEEC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD--RHIRFFDN 82 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d--~~i~~~~~ 82 (116)
..+..++|++ +++.+++...++.|..+|... +....+... ..+..+++.++++++++.... ..|..++.
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~-------~~p~gia~~~dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDG-NQQIHATVE-------GKVSGLAFTSNGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTC-CEEEEEECS-------SEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCC-ceEEEEeCC-------CCceeEEEcCCCcEEEEeccCCcceEEEEcC
Confidence 4567889999 677666666788999999864 443333322 458899999999966665432 35777777
Q ss_pred CCCeEEE
Q psy17133 83 VSGKLVH 89 (116)
Q Consensus 83 ~~~~~~~ 89 (116)
.+++...
T Consensus 103 ~~g~~~~ 109 (306)
T 2p4o_A 103 SDGTVET 109 (306)
T ss_dssp TTSCEEE
T ss_pred CCCeEEE
Confidence 7776543
No 281
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.09 E-value=0.011 Score=38.47 Aligned_cols=79 Identities=10% Similarity=-0.014 Sum_probs=50.7
Q ss_pred CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEEC
Q psy17133 26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVD 104 (116)
Q Consensus 26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~ 104 (116)
.+.+..||+.+++.+-..+... ....-.+...+.+++.++.|+.++.+|.++|+.+..+..... ...-+.|.
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~-------~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~ 524 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERF-------AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYT 524 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESS-------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred cCeEEEEECCCCCEEeEecCCC-------CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEE
Confidence 4678889998888776664321 111111222466777789999999999999999988763322 11224555
Q ss_pred CCCcEEE
Q psy17133 105 PQGLYIL 111 (116)
Q Consensus 105 ~~~~~l~ 111 (116)
.+|+..+
T Consensus 525 ~~G~qyv 531 (599)
T 1w6s_A 525 HKGTQYV 531 (599)
T ss_dssp ETTEEEE
T ss_pred eCCEEEE
Confidence 6777443
No 282
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.05 E-value=0.0016 Score=42.91 Aligned_cols=100 Identities=11% Similarity=-0.024 Sum_probs=55.9
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEEEECCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRFFDNVS 84 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~~~~~~ 84 (116)
+..+++.+.+++++++-...+.|.++++.... +..+.... ......++++|.+..|+.... .+.|..+++..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~-----~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQ-----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC-EEEECCCS-----SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCc-eEEEEeCC-----CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 45677765344555555567788888876443 33332211 234678899987554444332 26777777653
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
..........-.....++++|++..|+.
T Consensus 529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 529 VDIYSLVTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp CCCCEESCSSCSSCCCEEECTTTCCEEE
T ss_pred CCeeEEEeCCCCCccEEEEeccCCEEEE
Confidence 2222222222234667889987655443
No 283
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.03 E-value=0.024 Score=35.58 Aligned_cols=109 Identities=12% Similarity=0.136 Sum_probs=60.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCC---CCEEEEEe-C-----
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPT---LPLTITAH-D----- 73 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~-~----- 73 (116)
..+..++|.| +++++++-...+.|++++..+++... .+...............++++|+ +..|+... .
T Consensus 27 ~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4567899999 77766665444578888765554322 22211000001356789999995 44444332 1
Q ss_pred -------CCeEEEEECCCC--e-----EE-EEee-cccccEEEEEECCCCcEEEeee
Q psy17133 74 -------DRHIRFFDNVSG--K-----LV-HSMV-AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 74 -------d~~i~~~~~~~~--~-----~~-~~~~-~~~~~v~~~~~~~~~~~l~~~s 114 (116)
...|.-++.... . .+ ..+. ...+....++|.|||.++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554321 1 11 1122 1123578999999998777644
No 284
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.00 E-value=0.032 Score=36.43 Aligned_cols=102 Identities=14% Similarity=0.090 Sum_probs=60.9
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFD 81 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~ 81 (116)
.+.+.+++|++.++..+++-...+.|..+++..... ...+... ......+++++.+. +.++-...+.|.+.+
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~------~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~ 112 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG------LLSPDGLACDWLGEKLYWTDSETNRIEVSN 112 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSS------CSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCC------CCCcCeEEEEecCCEEEEEeCCCCEEEEEE
Confidence 345678899884444444545577888888864432 2222222 24688999998655 555556678999999
Q ss_pred CCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
+............-.....++++|.+..|+
T Consensus 113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly 142 (619)
T 3s94_A 113 LDGSLRKVLFWQELDQPRAIALDPSSGFMY 142 (619)
T ss_dssp TTSCSCEEEECSSCSCCCCEEEETTTTEEE
T ss_pred CCCCCEEEEEeCCCCCCceEEEecCCCeEE
Confidence 874433333323334577888888654443
No 285
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.99 E-value=0.021 Score=34.31 Aligned_cols=74 Identities=5% Similarity=0.008 Sum_probs=48.0
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-CC--CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-SG--GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-~~--~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
..+++++.++.++.+|..+++.+..+....... .+ ...+.. ....++..++.++.++.|..+|.++|+.+....
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 566777778899999999998876665431100 00 011211 112235567778889999999999998876654
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.98 E-value=0.0015 Score=42.96 Aligned_cols=100 Identities=10% Similarity=-0.000 Sum_probs=56.0
Q ss_pred CCceEEEEccCCCcEEEEe-eCCCeEEEEECCC----CceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133 5 GTPTSIDFVRDESTKMVTA-FDNSACVLFDLET----GKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~ 78 (116)
..+.+++|.+ ....|+.+ ...+.|+.+++.. ......+... ......+++.+. +.++++-...+.|.
T Consensus 406 ~~p~gla~d~-~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~------~~~P~glavD~~~g~LY~tD~~~~~I~ 478 (699)
T 1n7d_A 406 RNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVLGTVS 478 (699)
T ss_dssp TTCCCCEEET-TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSC------C--CCCEECCCSSSBCEECCTTTSCEE
T ss_pred cceEEEcccc-ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCC------CCCcceEEEEeeCCcEEEEeccCCeEE
Confidence 4466788887 44444444 4567788888764 1111111111 123567888865 44555555678899
Q ss_pred EEECCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
++++........+.........++++|.+.+|+
T Consensus 479 v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly 511 (699)
T 1n7d_A 479 VADTKGVKRKTLFREQGSKPRAIVVDPVHGFMY 511 (699)
T ss_dssp EEBSSSCCEEEECCCSSCCCCCEECCSSSSCCE
T ss_pred EEecCCCceEEEEeCCCCCcceEEEccCCCcEE
Confidence 999875444333332234567788888654443
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.96 E-value=0.035 Score=36.30 Aligned_cols=101 Identities=11% Similarity=-0.004 Sum_probs=63.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~ 83 (116)
+.+.+++|++.++...++-..++.|+.+++........+... ......+++++.+. +..+-...+.|.+.++.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g------~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG------LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC------CCCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 456789999845455555556788999998744333333322 23577899987655 44555567899999987
Q ss_pred CCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
...........-.....++++|....|+
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY 138 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMY 138 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEE
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEE
Confidence 4433222323334678899998544444
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.92 E-value=0.028 Score=36.70 Aligned_cols=97 Identities=10% Similarity=-0.043 Sum_probs=56.6
Q ss_pred CCcEEEEeeCCC-----------eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133 16 ESTKMVTAFDNS-----------ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---------- 74 (116)
Q Consensus 16 ~~~~l~~~~~~~-----------~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---------- 74 (116)
++++++.|+.+. .+.+||..+.+........-. ....-......|++++++.++.+
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp---~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~ 486 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY---FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTP 486 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS---SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSB
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC---CCcccCCeEECCCCCEEEECCcccCcCcCCCCc
Confidence 567777776432 577888776654332201100 01123455667899999888754
Q ss_pred -CeEEEEECCCCeEEEEee--cccccEEEEEECCCCcEEEeeec
Q psy17133 75 -RHIRFFDNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILSGTY 115 (116)
Q Consensus 75 -~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~ 115 (116)
..+.+||..+.+....-. ..........+.|+++.++.|+.
T Consensus 487 ~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 487 VFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 568999998776543211 11112234456799999998874
No 289
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.91 E-value=0.027 Score=34.19 Aligned_cols=109 Identities=15% Similarity=0.168 Sum_probs=62.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC---CCEEEEE---eCCCeEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT---LPLTITA---HDDRHIR 78 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~---~~d~~i~ 78 (116)
..+..++|.| ++.++++--..+.|++++..+++....................++++|+ ...++.. ..++.|.
T Consensus 32 ~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 4578899999 7776666555899999987655432111110000011456899999995 3334332 2355666
Q ss_pred EEECCCC----------eEE-EEee-cccccEEEEEECCCCcEEEeee
Q psy17133 79 FFDNVSG----------KLV-HSMV-AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 79 ~~~~~~~----------~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~s 114 (116)
-|....+ +.+ ..+. ...+....+.|.|||.++++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 6665431 111 1222 1122346799999998777643
No 290
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.88 E-value=0.028 Score=33.98 Aligned_cols=107 Identities=12% Similarity=0.132 Sum_probs=57.2
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC-cCcCCCCceeEEEEcCC---CCEEEEEe-C------
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ-FGVSGGGGINRVVCHPT---LPLTITAH-D------ 73 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~---~~~~~~~~-~------ 73 (116)
..+..++|.| +++.++++...+.|++++.. ++....+.... ...........++++|+ +..++... .
T Consensus 18 ~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECS-TTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcC-CCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4567899999 77734455567899999853 43211111100 00001345789999996 44444332 2
Q ss_pred -CCeEEEEECCCC--e--EEEE-eec------ccccEEEEEECCCCcEEEee
Q psy17133 74 -DRHIRFFDNVSG--K--LVHS-MVA------HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 74 -d~~i~~~~~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~l~~~ 113 (116)
...|..++.... . .... +.. .......++|.|||.++++.
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 235666665432 1 1111 111 11224679999999766654
No 291
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.84 E-value=0.046 Score=35.93 Aligned_cols=82 Identities=15% Similarity=0.145 Sum_probs=54.2
Q ss_pred EEEEccCCCcEEEEeeCCC-------------------eEEEEECCCCceeEEEecCCcC---cCCCCceeEEEEcCCCC
Q psy17133 9 SIDFVRDESTKMVTAFDNS-------------------ACVLFDLETGKPVVRIDSSQFG---VSGGGGINRVVCHPTLP 66 (116)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~-------------------~v~i~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~ 66 (116)
.+.+.| +...++.+..++ .|..+|..+++.+-.++..... ...........+..+++
T Consensus 234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 467777 556777776554 4899999999988777642100 00012233333334664
Q ss_pred ---EEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133 67 ---LTITAHDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 67 ---~~~~~~~d~~i~~~~~~~~~~~~~~ 91 (116)
.++.++.++.++++|.++|+.+...
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 6888889999999999999987543
No 292
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.81 E-value=0.037 Score=34.39 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=49.0
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNV 83 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~ 83 (116)
.+..++++|+++.++++-..++.|+.++..++.......... ......++++|+++.+ ++-...+.|..++..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-----~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-----SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-----SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-----CCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 456788888555666666678899999987654322222211 2346789999999955 445567889988754
No 293
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.63 E-value=0.053 Score=33.77 Aligned_cols=74 Identities=16% Similarity=0.106 Sum_probs=47.6
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNV 83 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~ 83 (116)
.+..++++|+++.++++-..++.|+.++..++.....+..... ......++++|++..+ ++-...+.|+.++..
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~----~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT----KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC----CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC----CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 3556778874555555555678899999886765233321110 1223579999999855 445557899998864
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.60 E-value=0.051 Score=33.11 Aligned_cols=103 Identities=13% Similarity=0.236 Sum_probs=67.8
Q ss_pred CCceEEEE--ccCCCc-EEEEeeCCCeEEEEECC-------CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133 5 GTPTSIDF--VRDEST-KMVTAFDNSACVLFDLE-------TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD 74 (116)
Q Consensus 5 ~~v~~~~~--~~~~~~-~l~~~~~~~~v~i~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 74 (116)
..+..+++ +|..+. ++++...++.+..|++. +.+.+++|... +.+..+...+....|+.+-++
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-------sq~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-------SQTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-------SCEEEEEEETTTTEEEEEETT
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-------CCcceEEEcCCCCeEEEeccc
Confidence 45667777 663343 57777788999888873 23456666654 467888888888889999888
Q ss_pred CeEEEEECC-----CCeEEEEee-cc-cccEEEEEE--CCCCc-EEEeee
Q psy17133 75 RHIRFFDNV-----SGKLVHSMV-AH-LDAVTSLAV--DPQGL-YILSGT 114 (116)
Q Consensus 75 ~~i~~~~~~-----~~~~~~~~~-~~-~~~v~~~~~--~~~~~-~l~~~s 114 (116)
.-|..++.+ +++.+.... ++ ...+..+++ .++++ +|++.+
T Consensus 201 ~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 201 EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 777777754 344554442 21 235777777 56666 666554
No 295
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.56 E-value=0.034 Score=36.17 Aligned_cols=102 Identities=12% Similarity=0.107 Sum_probs=66.5
Q ss_pred CCceEEEEccCCCcEEEEee-CCCeEEEEECCCC------ce-------eEEEecCCcCcCCCCceeEEEEcCCCCEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETG------KP-------VVRIDSSQFGVSGGGGINRVVCHPTLPLTIT 70 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~------~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 70 (116)
..+-.+..+| +|++++.++ .+.++.++|.... +. ..+.+. .-...-.+|.++|....+
T Consensus 323 ksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-------GlGPlHt~Fd~~G~aYTt 394 (638)
T 3sbq_A 323 KNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-------GLGPLHTTFDGRGNAYTT 394 (638)
T ss_dssp SSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-------CSCEEEEEECSSSEEEEE
T ss_pred CCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-------CCcccEEEECCCCceEee
Confidence 4456788899 677776655 6889999998732 11 112221 234677889999955555
Q ss_pred EeCCCeEEEEECCCC----------eEEEEeecccccEEEEE-----ECCCCcEEEeee
Q psy17133 71 AHDDRHIRFFDNVSG----------KLVHSMVAHLDAVTSLA-----VDPQGLYILSGT 114 (116)
Q Consensus 71 ~~~d~~i~~~~~~~~----------~~~~~~~~~~~~v~~~~-----~~~~~~~l~~~s 114 (116)
.--|..|.-|++... ..+..+..|.+.-...+ -.|+|++|++.+
T Consensus 395 lfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 395 LFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp ETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 667999999998753 45555655555433222 257899998865
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.55 E-value=0.077 Score=34.69 Aligned_cols=102 Identities=12% Similarity=0.021 Sum_probs=62.5
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~ 83 (116)
..+.+++|.+.++..+++-...+.|+.++.........+... -.....+++.+.+ .+..+-...+.|.+.++.
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~------~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQ------IAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECC------CCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 456788888744444455456788888888743333333222 2457789998754 455555667899999987
Q ss_pred CCeEEEEeecccccEEEEEECCC-CcEEEe
Q psy17133 84 SGKLVHSMVAHLDAVTSLAVDPQ-GLYILS 112 (116)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~ 112 (116)
...........-.....+++.|. |.++.+
T Consensus 423 G~~~~~l~~~~l~~P~~iavdp~~G~ly~t 452 (619)
T 3s94_A 423 GTMRKILISEDLEEPRAIVLDPMVGYMYWT 452 (619)
T ss_dssp SCSCEEEECTTCCSEEEEEEETTTTEEEEE
T ss_pred CCeEEEEEECCCCCeeeEEEEcCCCcEEEe
Confidence 44322222223346788999986 444333
No 297
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.54 E-value=0.056 Score=32.91 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=61.6
Q ss_pred CceEEEEccCCCcEEEEee-----------------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE
Q psy17133 6 TPTSIDFVRDESTKMVTAF-----------------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT 68 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~-----------------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 68 (116)
.+.++.+.+ ++.+.++.. ..+.++.++. ++ +..+... -...+.++|+||++.+
T Consensus 166 ~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~------l~~pNGia~spDg~~l 235 (355)
T 3sre_A 166 SVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEG------FDFANGINISPDGKYV 235 (355)
T ss_dssp SEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEE------ESSEEEEEECTTSSEE
T ss_pred CCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecC------CcccCcceECCCCCEE
Confidence 456778887 667666543 1245555554 32 2222221 1357899999999877
Q ss_pred EEEe-CCCeEEEEECC-CCeE--EEEeecccccEEEEEECC-CCcEEEeee
Q psy17133 69 ITAH-DDRHIRFFDNV-SGKL--VHSMVAHLDAVTSLAVDP-QGLYILSGT 114 (116)
Q Consensus 69 ~~~~-~d~~i~~~~~~-~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~s 114 (116)
+.+. ..+.|..|++. .++. .+.+ ...+..-.++.++ +|++.+++.
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred EEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 6654 57899999985 3433 2233 2345678899999 599877553
No 298
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.45 E-value=0.056 Score=34.90 Aligned_cols=27 Identities=15% Similarity=0.091 Sum_probs=21.6
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEEec
Q psy17133 19 KMVTAFDNSACVLFDLETGKPVVRIDS 45 (116)
Q Consensus 19 ~l~~~~~~~~v~i~~~~~~~~~~~~~~ 45 (116)
.++.++.++.++++|..+++.+..++.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 456677899999999999988776653
No 299
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.10 E-value=0.17 Score=33.87 Aligned_cols=103 Identities=6% Similarity=0.011 Sum_probs=65.4
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..|.++...+ ++..|..|..++-+.+++..+++. ..+...... .....|.++...+++.+.+... +-+.+|+.++
T Consensus 406 ~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~-l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~ 480 (795)
T 4a2l_A 406 NNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQ-LVNENVYAILPDGEGNLWLGTL--SALVRFNPEQ 480 (795)
T ss_dssp SCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCE-EEECTTTSC-CSCSCEEEEEECSSSCEEEEES--SCEEEEETTT
T ss_pred ccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCC-cCCCeeEEEEECCCCCEEEEec--CceeEEeCCC
Confidence 4577777776 556366667667799999887653 333321000 1134688898888888666554 3488899887
Q ss_pred CeEEEEeec------ccccEEEEEECCCCcEEEe
Q psy17133 85 GKLVHSMVA------HLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 85 ~~~~~~~~~------~~~~v~~~~~~~~~~~l~~ 112 (116)
++....... ....|.++...++++..+.
T Consensus 481 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 481 RSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp TEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred CeEEEccccccccccCCceEEEEEECCCCCEEEE
Confidence 765433211 1246888888888886654
No 300
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.86 E-value=0.17 Score=31.98 Aligned_cols=109 Identities=10% Similarity=0.124 Sum_probs=59.7
Q ss_pred CCceEEEEccCCCc-EEEEeeCCCeEEEEECCCCc---eeEEEecCCcC---cCCCCceeEEEEcCC----CCEEEEEeC
Q psy17133 5 GTPTSIDFVRDEST-KMVTAFDNSACVLFDLETGK---PVVRIDSSQFG---VSGGGGINRVVCHPT----LPLTITAHD 73 (116)
Q Consensus 5 ~~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~---~~~~~~i~~~~~~~~----~~~~~~~~~ 73 (116)
..+..|+|.| ++. .++++...+.|++++..... .+..+...... .........++++|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4567899999 664 56666778999999754221 22222110000 001346789999996 433333221
Q ss_pred --C----------CeEEEEECCC----------CeEEEEee--cccccEEEEEECCCCcEEEeee
Q psy17133 74 --D----------RHIRFFDNVS----------GKLVHSMV--AHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 74 --d----------~~i~~~~~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s 114 (116)
+ ..|.-|.+.. .+.+..+. ........++|.|||.+.++.+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 1 1444455532 12222222 1233567899999998777654
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.81 E-value=0.21 Score=32.75 Aligned_cols=107 Identities=11% Similarity=0.008 Sum_probs=63.1
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~ 83 (116)
+.+.+++|.+.++..+.+-...+.|+.++.........+............+..+++...+..| .+-...+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 4567888988444444444457788888876433222332200000002357899999886644 566667899999986
Q ss_pred CCeEEEEee-cccccEEEEEECC-CCcEEEe
Q psy17133 84 SGKLVHSMV-AHLDAVTSLAVDP-QGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~ 112 (116)
|+....+. ......+.+++.| .|.++.+
T Consensus 420 -G~~~~~l~~~~l~~Pr~iavdp~~g~ly~t 449 (628)
T 4a0p_A 420 -GRSVGVVLKGEQDRPRAVVVNPEKGYMYFT 449 (628)
T ss_dssp -SCEEEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred -CCeEEEEEeCCCCceeeEEEecCCCeEEEe
Confidence 55544443 3345688999998 4544443
No 302
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.75 E-value=0.22 Score=32.51 Aligned_cols=82 Identities=12% Similarity=0.055 Sum_probs=51.7
Q ss_pred EEEccCCCcEEEEeeCC----------------CeEEEEECCCCceeEEEecCCcCc---CCCCceeEEEEc-CCC---C
Q psy17133 10 IDFVRDESTKMVTAFDN----------------SACVLFDLETGKPVVRIDSSQFGV---SGGGGINRVVCH-PTL---P 66 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~~----------------~~v~i~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~-~~~---~ 66 (116)
.++.+ +...++.+..+ ..+..+|..+++.+-.++...... .......-+... .+| +
T Consensus 246 ~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp CEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred eeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 45556 44566655543 379999999999887776431100 000111223332 567 4
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 67 LTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 67 ~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
.++.++.++.+.+.|.++|+.+....
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCcEEEEEECCCCCEeeccc
Confidence 67778899999999999999887654
No 303
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.63 E-value=0.21 Score=32.66 Aligned_cols=58 Identities=19% Similarity=0.204 Sum_probs=42.8
Q ss_pred eeEEEEcCCCCEEEEEeCC------------CeEEEEECCCCeEEEEeecc-cccEEEEEECCCCcEEEee
Q psy17133 56 INRVVCHPTLPLTITAHDD------------RHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 56 i~~~~~~~~~~~~~~~~~d------------~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 113 (116)
.--+.|+|.|.+++.-..+ +.+.+.+..+++..+-+... ...+..++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999977665432 45677777778877666543 4689999999999988754
No 304
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.38 E-value=0.35 Score=32.37 Aligned_cols=105 Identities=12% Similarity=0.094 Sum_probs=65.5
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC-cC--cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ-FG--VSGGGGINRVVCHPTLPLTITAHDDRHIRFFD 81 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~--~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~ 81 (116)
..|.++...+ ++. |..|..++-+..|+..+++.. .+.... .. ......|.++...+++..+..+..++-|..++
T Consensus 357 ~~V~~i~~d~-~g~-lWiGt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 357 NVVSCIVEDK-DKN-LWIGTNDGGLNLYNPITQRFT-SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp SSEEEEEECT-TSC-EEEEESSSCEEEECTTTCCEE-EECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CeeEEEEECC-CCC-EEEEECCCCeEEEcCCCCcEE-EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 3577777766 444 555666767899998765433 222110 00 00024688998888888555666667799999
Q ss_pred CCCCeEEEEee----cccccEEEEEECCCCcEEEe
Q psy17133 82 NVSGKLVHSMV----AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 82 ~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~ 112 (116)
.++++...... .....|.++...++++..+.
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig 468 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG 468 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence 88776544321 12346888888888886554
No 305
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.31 E-value=0.3 Score=31.22 Aligned_cols=103 Identities=12% Similarity=0.098 Sum_probs=57.8
Q ss_pred CceEEEEccC-CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE-------cCCCCEEEEEeCCC--
Q psy17133 6 TPTSIDFVRD-ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC-------HPTLPLTITAHDDR-- 75 (116)
Q Consensus 6 ~v~~~~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~d~-- 75 (116)
.+..++|+|. +++++++......|++.|..++........... .......++| ++++..++.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~---~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTI---PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTS---SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCcc---ccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 4678999983 344444444456788899886654443332210 0235789999 99998666665443
Q ss_pred -----eEEEEECCC-CeEE-----EEeecccccEEEEEECCCCcEEEe
Q psy17133 76 -----HIRFFDNVS-GKLV-----HSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 76 -----~i~~~~~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
.+.+++... +... +.+.. ......++.+|++..|+.
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYv 263 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYF 263 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEE
T ss_pred cccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEE
Confidence 355665333 2221 22221 123456788995554443
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.89 E-value=0.34 Score=29.58 Aligned_cols=94 Identities=9% Similarity=0.062 Sum_probs=64.8
Q ss_pred EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEE
Q psy17133 10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS-GKLV 88 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~ 88 (116)
.-.+| ..+.++.-. ...+.++|+++.+.++.+.-. ..|....|-.+..+.... +..|+-|+++. ..+.
T Consensus 72 AIMnP-~~~ViALra-g~~LQiFnletK~klks~~~~-------e~VvfWkWis~~~L~lVT--~taVyHWs~~~~s~P~ 140 (365)
T 2xzh_A 72 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-------DDVTFWKWISLNTVALVT--DNAVYHWSMEGESQPV 140 (365)
T ss_dssp EEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEECS-------SCEEEEEECSSSEEEEEE--SSEEEEEESSTTCCCE
T ss_pred eeeCC-CccEEEEec-CCeEEEechHHhhhhcceecC-------CccEEEEecCCCeEEEEc--CCcEEEEcccCCCCCc
Confidence 34577 556665554 778999999999888888765 367788887654433333 56899999873 4455
Q ss_pred EEeecc----cccEEEEEECCCCcEEEeee
Q psy17133 89 HSMVAH----LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 89 ~~~~~~----~~~v~~~~~~~~~~~l~~~s 114 (116)
+.+..| ...|.+-..+++.+|++..+
T Consensus 141 kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 170 (365)
T 2xzh_A 141 KMFDRHSSLAGCQIINYRTDAKQKWLLLTG 170 (365)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEE
T ss_pred eeeecchhcccceEEEEEECCCCCEEEEEe
Confidence 555543 34677778899999987543
No 307
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.62 E-value=0.61 Score=31.19 Aligned_cols=100 Identities=13% Similarity=0.043 Sum_probs=61.3
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..|.++...+ ++. |..+..++-+..++..+++. ..+.... .....|.++...+++.+.+.. . +-+..++..+
T Consensus 407 ~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~---~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~ 478 (781)
T 3v9f_A 407 NSVLCSLKDS-EGN-LWFGTYLGNISYYNTRLKKF-QIIELEK---NELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLAS 478 (781)
T ss_dssp SBEEEEEECT-TSC-EEEEETTEEEEEECSSSCEE-EECCSTT---TCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSS
T ss_pred cceEEEEECC-CCC-EEEEeccCCEEEEcCCCCcE-EEeccCC---CCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCC
Confidence 4567777665 444 44456556788888876543 3332110 003468888888888755544 3 5688899877
Q ss_pred CeEEEEeecc-----cccEEEEEECCCCcEEEe
Q psy17133 85 GKLVHSMVAH-----LDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 85 ~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~ 112 (116)
++........ ...+.++...++|++.+.
T Consensus 479 ~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 479 KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred CeEEecccCcccccccceeEEEEEcCCCCEEEE
Confidence 6554332211 356888888888886654
No 308
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.17 E-value=1 Score=31.87 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=31.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
.+.+++..++..++++.+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34555666788899999999999999999998887643
No 309
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.10 E-value=0.53 Score=28.45 Aligned_cols=57 Identities=12% Similarity=0.080 Sum_probs=33.0
Q ss_pred eeEEEEcCCCCEEEEEeCC-------------CeEEEEECCCCe------------EEEEeecccccEEEEEECC-CCcE
Q psy17133 56 INRVVCHPTLPLTITAHDD-------------RHIRFFDNVSGK------------LVHSMVAHLDAVTSLAVDP-QGLY 109 (116)
Q Consensus 56 i~~~~~~~~~~~~~~~~~d-------------~~i~~~~~~~~~------------~~~~~~~~~~~v~~~~~~~-~~~~ 109 (116)
...+.|.|+|.+.++.+.. +.|.-++..... ....+...-.....++|+| +++.
T Consensus 132 ~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l 211 (353)
T 2g8s_A 132 GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNAL 211 (353)
T ss_dssp CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEE
T ss_pred CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCE
Confidence 4579999999766665432 466666654220 1111221122478899999 6766
Q ss_pred EEe
Q psy17133 110 ILS 112 (116)
Q Consensus 110 l~~ 112 (116)
+++
T Consensus 212 ~~~ 214 (353)
T 2g8s_A 212 WLN 214 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 310
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=94.05 E-value=0.77 Score=30.11 Aligned_cols=60 Identities=17% Similarity=0.188 Sum_probs=43.0
Q ss_pred CceeEEEEcCCCCEEEEEeC------------CCeEEEEECCCCeEEEEeecc-cccEEEEEECCCCcEEEee
Q psy17133 54 GGINRVVCHPTLPLTITAHD------------DRHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~------------d~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 113 (116)
.....+.++++|.+.+.... .+.+..++..+++....+... ...+..++|+||++.|+.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 34567999999987774322 236777777778876655432 3578999999999988764
No 311
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.04 E-value=0.69 Score=29.50 Aligned_cols=94 Identities=9% Similarity=0.034 Sum_probs=63.4
Q ss_pred EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEE
Q psy17133 10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS-GKLV 88 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~ 88 (116)
.-.+| ..+.++.-. ...+.++|+++.+.++.+.-. ..|....|-.+.. ++.. .+..|+-|++.. ..+.
T Consensus 71 AIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~-------e~VvfWkWis~~~-l~lV-T~taVyHWsi~~~s~P~ 139 (494)
T 1bpo_A 71 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-------DDVTFWKWISLNT-VALV-TDNAVYHWSMEGESQPV 139 (494)
T ss_dssp EEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECS-------SCCCEEEEEETTE-EEEE-CSSEEEEEESSSSCCCE
T ss_pred eeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecC-------CCceEEEecCCCe-EEEE-cCCeeEEecccCCCCch
Confidence 34567 555555544 788999999998888887765 3567777765443 3332 356899999963 3455
Q ss_pred EEeecc----cccEEEEEECCCCcEEEeee
Q psy17133 89 HSMVAH----LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 89 ~~~~~~----~~~v~~~~~~~~~~~l~~~s 114 (116)
+.+..| ...|.+-..+++.+|++..+
T Consensus 140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 169 (494)
T 1bpo_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (494)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSSEEEEEE
T ss_pred hheecchhcccceEEEEEECCCCCeEEEEe
Confidence 555543 34677788899999987543
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.03 E-value=0.57 Score=28.59 Aligned_cols=100 Identities=15% Similarity=0.283 Sum_probs=55.9
Q ss_pred CceEEEEccC-CCc-EEEEe-eC--CCeEEEEECCCC-ce---eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---
Q psy17133 6 TPTSIDFVRD-EST-KMVTA-FD--NSACVLFDLETG-KP---VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--- 73 (116)
Q Consensus 6 ~v~~~~~~~~-~~~-~l~~~-~~--~~~v~i~~~~~~-~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--- 73 (116)
.+..+.+.++ ++. +|++. .. +..+.+|++... .. +..+.+.. -...+.+.+.++|.+.++..-
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~-----~~~pND~~v~~~G~fyvt~~~~ft 187 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL-----LPSVNDIVAVGPEHFYATNDHYFI 187 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTT-----CSSEEEEEEEETTEEEEEESCSCS
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCC-----CCCCceEEEeCCCCEEecCCcEeC
Confidence 4556666542 222 34333 33 456777766532 22 23343331 346889999999987776541
Q ss_pred --------------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133 74 --------------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 74 --------------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 113 (116)
.+.+..++. ++.. .+...-...+.++|+||++.|+.+
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEE
T ss_pred CcccccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECCCCCEEEEE
Confidence 234444444 4332 222233457899999999987754
No 313
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.41 E-value=1.3 Score=30.72 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=31.7
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 91 (116)
.+.++...++..++++.+.|+++++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4567777788889999999999999999999887764
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.26 E-value=0.95 Score=28.64 Aligned_cols=76 Identities=12% Similarity=0.154 Sum_probs=48.8
Q ss_pred CCCceEEEEccCC--CcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcC---cCCCCceeEEEEcCCCCEEEEEe--CC
Q psy17133 4 NGTPTSIDFVRDE--STKMVTAFDNSACVLFDLETG--KPVVRIDSSQFG---VSGGGGINRVVCHPTLPLTITAH--DD 74 (116)
Q Consensus 4 ~~~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~--~d 74 (116)
..+|..+.|+|-. +..|++-..|+.|++||+... ++. .++..... -.....+.+++|.+++-.++... ..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~ 202 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEG 202 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTS
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCC
Confidence 4678999999852 347888889999999999742 222 33211100 01124678899998877666654 56
Q ss_pred CeEEEE
Q psy17133 75 RHIRFF 80 (116)
Q Consensus 75 ~~i~~~ 80 (116)
|.|+-.
T Consensus 203 GDIYAl 208 (452)
T 3pbp_A 203 GDIFAF 208 (452)
T ss_dssp CEEEEE
T ss_pred CCEEEE
Confidence 666544
No 315
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.98 E-value=0.93 Score=27.77 Aligned_cols=109 Identities=8% Similarity=0.142 Sum_probs=61.9
Q ss_pred CCceEEEEccC---CCc---EEEEee-C--CCeEEEEECC-CCceeEEEecCCcCcCCC-CceeEEEE--cCC-CC-EEE
Q psy17133 5 GTPTSIDFVRD---EST---KMVTAF-D--NSACVLFDLE-TGKPVVRIDSSQFGVSGG-GGINRVVC--HPT-LP-LTI 69 (116)
Q Consensus 5 ~~v~~~~~~~~---~~~---~l~~~~-~--~~~v~i~~~~-~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~-~~-~~~ 69 (116)
+.+..+...|. ++. ++++.. . +.++.+|++. ....+..+..-....... ..+..+|+ +|. ++ +++
T Consensus 68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yaf 147 (355)
T 3amr_A 68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAM 147 (355)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEE
T ss_pred CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEE
Confidence 55666666651 111 233333 3 5789999663 222344442100000001 35667777 774 54 677
Q ss_pred EEeCCCeEEEEECC-------CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133 70 TAHDDRHIRFFDNV-------SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 70 ~~~~d~~i~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s 114 (116)
....++.+..|++. +.+.++.+.. ...+..+...+....|+.+-
T Consensus 148 V~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~e 198 (355)
T 3amr_A 148 VTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAE 198 (355)
T ss_dssp EECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEE
T ss_pred EECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEec
Confidence 78888999999882 3455666653 34677888888766666553
No 316
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.87 E-value=0.87 Score=27.11 Aligned_cols=101 Identities=10% Similarity=0.020 Sum_probs=55.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+.+..+.+.+ ++..++++. .+.++.-.-..++.-..+.... ...+..+.+.+++.+++. +.++.+++.+...
T Consensus 163 ~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~-----~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~ 234 (327)
T 2xbg_A 163 GVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTT-----SRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDN 234 (327)
T ss_dssp CCEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEEECCS-----SSCEEEEEECTTSCEEEE-ETTTEEEEEETTE
T ss_pred cceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeECCCCC-----CCccceeEECCCCCEEEE-eCCceEEEecCCC
Confidence 4567788888 566666554 4444443211122222222111 346788888888876644 4577777664333
Q ss_pred CeEEEEee-c---ccccEEEEEECCCCcEEEee
Q psy17133 85 GKLVHSMV-A---HLDAVTSLAVDPQGLYILSG 113 (116)
Q Consensus 85 ~~~~~~~~-~---~~~~v~~~~~~~~~~~l~~~ 113 (116)
++.-..+. . ....+..+.+.+++..++.+
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE
T ss_pred CCeeEeccCCcccCCcceEEEEecCCCEEEEEe
Confidence 43332222 1 12347888898887777654
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.64 E-value=1 Score=27.31 Aligned_cols=101 Identities=16% Similarity=0.084 Sum_probs=54.2
Q ss_pred CCceEEEEccC---CCcEEEEeeC---C----CeEEEEECCCC--c---e--e-EEEecCCcCcCCCCceeEEEEcCCCC
Q psy17133 5 GTPTSIDFVRD---ESTKMVTAFD---N----SACVLFDLETG--K---P--V-VRIDSSQFGVSGGGGINRVVCHPTLP 66 (116)
Q Consensus 5 ~~v~~~~~~~~---~~~~l~~~~~---~----~~v~i~~~~~~--~---~--~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 66 (116)
+.+..++++|+ ++.+.++-.. + ..|..++.... . . + ..+.... ......+.|.|+|.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~-----~h~~~~l~~~pDG~ 147 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAY-----IHNGGRIRFGPDGM 147 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCS-----SCCCCCEEECTTSC
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCC-----CcCCceEEECCCCc
Confidence 45788999994 3444444332 2 56777776543 1 1 1 1122110 12346799999998
Q ss_pred EEEEEeC-------------CCeEEEEECCCCe--------EEEEee-cccccEEEEEECC-CCcEEEe
Q psy17133 67 LTITAHD-------------DRHIRFFDNVSGK--------LVHSMV-AHLDAVTSLAVDP-QGLYILS 112 (116)
Q Consensus 67 ~~~~~~~-------------d~~i~~~~~~~~~--------~~~~~~-~~~~~v~~~~~~~-~~~~l~~ 112 (116)
+.++.+. .+.|.-++.. ++ ....+. ++ .....++|+| +++.+++
T Consensus 148 Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 148 LYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVAT 214 (354)
T ss_dssp EEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEE
T ss_pred EEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEE
Confidence 7766443 1455555544 22 011111 22 2356899999 6776654
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.02 E-value=1.1 Score=26.17 Aligned_cols=68 Identities=1% Similarity=0.008 Sum_probs=37.5
Q ss_pred CCcEEEEeeCC----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC------CeEEEEECCCC
Q psy17133 16 ESTKMVTAFDN----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD------RHIRFFDNVSG 85 (116)
Q Consensus 16 ~~~~l~~~~~~----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~ 85 (116)
++..++.|+.+ ..+.+||..+++....-..... ......+.+ ++++++.++.+ ..+.+||+.+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP----RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC----CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc----ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 44666666643 5688899887654322211110 111222222 56666666654 46889998877
Q ss_pred eEEE
Q psy17133 86 KLVH 89 (116)
Q Consensus 86 ~~~~ 89 (116)
+-..
T Consensus 129 ~W~~ 132 (306)
T 3ii7_A 129 SWHT 132 (306)
T ss_dssp EEEE
T ss_pred ceEe
Confidence 6443
No 319
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.99 E-value=2.2 Score=29.70 Aligned_cols=37 Identities=22% Similarity=0.177 Sum_probs=29.8
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID 44 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~ 44 (116)
+.++...+ +..++++-+.|+++++|++.+++.+....
T Consensus 238 ~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45566665 66789999999999999999998877654
No 320
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.89 E-value=1.7 Score=28.30 Aligned_cols=66 Identities=15% Similarity=0.033 Sum_probs=43.3
Q ss_pred CeEEEEECCCCceeEEEecCCc-CcCC--CCceeEEEEc-CCCC---EEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 27 SACVLFDLETGKPVVRIDSSQF-GVSG--GGGINRVVCH-PTLP---LTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~-~~~~--~~~i~~~~~~-~~~~---~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
+.|..+|..+++.+-.++.... .-.. .....-+... .+|+ .++.++.++.++++|.++|+.+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 5799999999998877754210 0000 0111222222 4664 67788999999999999999887654
No 321
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.34 E-value=1.6 Score=32.19 Aligned_cols=92 Identities=9% Similarity=0.080 Sum_probs=57.8
Q ss_pred EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEE
Q psy17133 12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS-GKLVHS 90 (116)
Q Consensus 12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~ 90 (116)
.+| ..+.++.-. ...+.++++++.+.+..+.-. ..|....|-....+-... +..|..|++.. ..+.+.
T Consensus 73 MnP-~~~iiALra-g~~lQiFnl~~k~klks~~~~-------e~VvfWkWis~~~l~lVT--~~aVyHW~~~~~s~P~k~ 141 (1630)
T 1xi4_A 73 MNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-------DDVTFWKWISLNTVALVT--DNAVYHWSMEGESQPVKM 141 (1630)
T ss_pred cCC-CcceEEEec-CCeEEEeehHHhhhhcccccC-------CCceEEEecCCCeeEEEc--CCeEEEeccCCCCccHHH
Confidence 456 445554443 678999999887777776654 357777776544332222 46899999963 233333
Q ss_pred eecc----cccEEEEEECCCCcEEEeee
Q psy17133 91 MVAH----LDAVTSLAVDPQGLYILSGT 114 (116)
Q Consensus 91 ~~~~----~~~v~~~~~~~~~~~l~~~s 114 (116)
+..| ...|.+-..+++.+|++..|
T Consensus 142 fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred HhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 3322 34677777889999887543
No 322
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=91.17 E-value=0.65 Score=31.23 Aligned_cols=30 Identities=17% Similarity=0.167 Sum_probs=26.1
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 63 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
.+..++++.+.|+.+|+|++.+++++....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 357799999999999999999999877654
No 323
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=91.10 E-value=2.2 Score=28.07 Aligned_cols=60 Identities=13% Similarity=0.164 Sum_probs=39.4
Q ss_pred CceEEEEccCCCcEEEEeeC------------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE
Q psy17133 6 TPTSIDFVRDESTKMVTAFD------------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA 71 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~------------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (116)
.+-.|.|+| .+.+++.-.. +..+.+.+..+++....+.+.. ...++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~-----gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-----GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT-----TCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC-----CccCcCeeECCCCCEEEEE
Confidence 346788999 6776655332 1245556666676555555543 4689999999999877654
No 324
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.55 E-value=1.7 Score=25.83 Aligned_cols=98 Identities=10% Similarity=0.118 Sum_probs=51.7
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV 83 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~ 83 (116)
+.+..+.+.+ ++..++++ .++.++. ....++.-.... .. ...+..+.+.+++.+++.+......+-.|-.
T Consensus 122 ~~~~~i~~~~-~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~------~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g 192 (327)
T 2xbg_A 122 GSPRLIKALG-NGSAEMIT-NVGAIYR-TKDSGKNWQALVQEA------IGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG 192 (327)
T ss_dssp SCEEEEEEEE-TTEEEEEE-TTCCEEE-ESSTTSSEEEEECSC------CCCEEEEEECTTSCEEEEETTSSEEEEECTT
T ss_pred CCeEEEEEEC-CCCEEEEe-CCccEEE-EcCCCCCCEEeecCC------CcceEEEEEcCCCcEEEEECCCcEEEEeCCC
Confidence 3466777765 44555544 3454432 222343333332 22 3468889999988887776544444444421
Q ss_pred CCeEEEEe-ecccccEEEEEECCCCcEEEe
Q psy17133 84 SGKLVHSM-VAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 84 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~ 112 (116)
++.-..+ ......+..+.+.++++.++.
T Consensus 193 -G~tW~~~~~~~~~~~~~~~~~~~g~~~~~ 221 (327)
T 2xbg_A 193 -QTAWEPHNRTTSRRLHNMGFTPDGRLWMI 221 (327)
T ss_dssp -CSSCEEEECCSSSCEEEEEECTTSCEEEE
T ss_pred -CCceeECCCCCCCccceeEECCCCCEEEE
Confidence 2211111 223446777888888776554
No 325
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.34 E-value=1.6 Score=25.27 Aligned_cols=68 Identities=7% Similarity=-0.002 Sum_probs=36.3
Q ss_pred CCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q psy17133 16 ESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVSG 85 (116)
Q Consensus 16 ~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 85 (116)
++..++.|+.+ ..+.+||..+.+....-..... ......+. .++++++.++.+ ..+.+||+++.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK----RSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc----cccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 34566666532 4588899876653322111100 11112222 256666666653 56899999877
Q ss_pred eEEE
Q psy17133 86 KLVH 89 (116)
Q Consensus 86 ~~~~ 89 (116)
+-..
T Consensus 233 ~W~~ 236 (301)
T 2vpj_A 233 SWTT 236 (301)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6543
No 326
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=90.31 E-value=2.7 Score=27.71 Aligned_cols=61 Identities=13% Similarity=0.163 Sum_probs=40.4
Q ss_pred CCceEEEEccCCCcEEEEeeC------------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE
Q psy17133 5 GTPTSIDFVRDESTKMVTAFD------------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA 71 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~------------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 71 (116)
..+..+.|.+ ++.+.+.... +..+..++..+++....+.+.. ...++.++|+||++.|+..
T Consensus 476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-----~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-----GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-----TCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-----CccccCCEECCCCCEEEEE
Confidence 4466789998 6776663221 2267777777776555444331 2468999999999977664
No 327
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.98 E-value=2.2 Score=26.22 Aligned_cols=72 Identities=17% Similarity=0.107 Sum_probs=49.1
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
-+-++..++ .-..+..-...|.+++||++++..+..-+-. ...|...+-+.+..-++....+|.|.-..+..
T Consensus 261 FPVamqvs~-kygviyviTK~G~ihlyDleTgt~i~~nrIS------~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 261 FPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRIS------GETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp CEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred ceEEEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEeccC------CCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 345666666 4567777788999999999999988776655 34565555555555566666777766665543
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.81 E-value=4.2 Score=29.12 Aligned_cols=64 Identities=16% Similarity=0.306 Sum_probs=37.4
Q ss_pred CcEEEEee----------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 17 STKMVTAF----------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 17 ~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
..++++|. ..|.+++|++..++ +..+..... .+.+.+++-- +|+++++. ...+++|++...+
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k-L~lv~~~~v----~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK-LQTVAEKEV----KGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEK 915 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTE-EEEEEEEEE----SSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTS
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCE-EEEEEEEEc----CCcCEEEeee-CCEEEEEc--CCEEEEEECCCCc
Confidence 46777765 24679999886443 222211111 3567777643 46555544 4689999987654
Q ss_pred EE
Q psy17133 87 LV 88 (116)
Q Consensus 87 ~~ 88 (116)
.+
T Consensus 916 ~L 917 (1158)
T 3ei3_A 916 EL 917 (1158)
T ss_dssp CE
T ss_pred eE
Confidence 33
No 329
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.72 E-value=3.3 Score=27.81 Aligned_cols=103 Identities=8% Similarity=-0.001 Sum_probs=60.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
..|.++...+ ++. +..+.. +-+..++..+++.......... ......+.++...+++.+.+.....| +..++..+
T Consensus 450 ~~v~~i~~d~-~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~ 524 (781)
T 3v9f_A 450 LDVRVFYEDK-NKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNS-QLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDM 524 (781)
T ss_dssp CCEEEEEECT-TSE-EEEEET-TEEEEEESSSSSCCEEECTTTS-SCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTC
T ss_pred CeEEEEEECC-CCC-EEEEEC-CceEEEeCCCCeEEecccCccc-ccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCC
Confidence 4577777766 444 444444 5688999876654332221100 00124688898888888666554344 66688776
Q ss_pred CeEEEEeec---ccccEEEEEECCCCcEEEe
Q psy17133 85 GKLVHSMVA---HLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 85 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~~ 112 (116)
++....... ....|.++...++|++.++
T Consensus 525 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 525 QLVRKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp CEEEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred CeEEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 654332211 1346788888888886654
No 330
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.55 E-value=2.3 Score=25.71 Aligned_cols=50 Identities=20% Similarity=0.278 Sum_probs=34.1
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE--Eee---cccccEEEEEECCC
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVH--SMV---AHLDAVTSLAVDPQ 106 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~---~~~~~v~~~~~~~~ 106 (116)
.....+++.|+++++++ ...+.|.+++ .++... .+. ........++++|+
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pd 85 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPR 85 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCC
Confidence 35789999999985555 4568999998 444321 111 12346889999998
No 331
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.48 E-value=2.2 Score=25.36 Aligned_cols=87 Identities=8% Similarity=0.021 Sum_probs=48.4
Q ss_pred EEEccCCCcEEEEee----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEECCC
Q psy17133 10 IDFVRDESTKMVTAF----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDNVS 84 (116)
Q Consensus 10 ~~~~~~~~~~l~~~~----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~~~ 84 (116)
..|++ .+++|+... ....|+..++. +.....+..+ . + ..++++++.|+-.+. ...|...++..
T Consensus 109 ~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~------~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 109 IYASL-IGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNH------Y--L--FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEEE-ETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESS------C--C--CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred cEEEE-eCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCC------C--c--eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 35667 556666554 34456666665 4334444433 1 1 345677877766554 67788888876
Q ss_pred CeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 85 GKLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
+.....+.. ... ..+.|++.+|+-
T Consensus 177 ~~~~~l~~~---~~~-~~~~P~g~~iy~ 200 (302)
T 3s25_A 177 QSEALFYDC---NCY-KPVVLDDTNVYY 200 (302)
T ss_dssp TEEEEEECS---CEE-EEEEEETTEEEE
T ss_pred CCEEEEeCC---Ccc-ceeeecCCEEEE
Confidence 654443321 122 234577777664
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.37 E-value=2 Score=24.97 Aligned_cols=68 Identities=7% Similarity=-0.054 Sum_probs=35.4
Q ss_pred CCcEEEEeeCC------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---------CCeEEEE
Q psy17133 16 ESTKMVTAFDN------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------DRHIRFF 80 (116)
Q Consensus 16 ~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------d~~i~~~ 80 (116)
++..++.|+.+ ..+.+||..+.+....-..... ......+. .++++++.++. -..+.+|
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~y 174 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ----RCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVY 174 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC----cceeEEEE--ECCEEEEECCCCCCCCcccccceEEEe
Confidence 44666666543 4588899887653322111100 11112222 25566665543 3458899
Q ss_pred ECCCCeEEE
Q psy17133 81 DNVSGKLVH 89 (116)
Q Consensus 81 ~~~~~~~~~ 89 (116)
|+.+.+-..
T Consensus 175 d~~~~~W~~ 183 (306)
T 3ii7_A 175 DPATETWTE 183 (306)
T ss_dssp ETTTTEEEE
T ss_pred CCCCCeEEE
Confidence 988775443
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.28 E-value=2.8 Score=26.44 Aligned_cols=53 Identities=13% Similarity=0.179 Sum_probs=36.4
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE--Eeec------ccccEEEEEECCC
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVH--SMVA------HLDAVTSLAVDPQ 106 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~~------~~~~v~~~~~~~~ 106 (116)
.....+++.|+|+++++-...+.|++++..+++... .+.. ....+..++|+|+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 357899999999977776555678888765554432 2221 2346779999995
No 334
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.44 E-value=1 Score=31.83 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=28.3
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID 44 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~ 44 (116)
.++...+ +..++++-+.|+++++|++.+++.+.+..
T Consensus 241 vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 241 ISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp SCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3444445 56789999999999999999998877654
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.35 E-value=2.9 Score=25.48 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=38.5
Q ss_pred CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE--e----ecccccEEEEEECCC
Q psy17133 54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS--M----VAHLDAVTSLAVDPQ 106 (116)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~--~----~~~~~~v~~~~~~~~ 106 (116)
.....+++.|++.++++--..+.|++++...++.... + .........++++|+
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 4678999999999877776689999998765554221 1 122456789999995
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.19 E-value=2.5 Score=24.53 Aligned_cols=68 Identities=12% Similarity=0.018 Sum_probs=35.6
Q ss_pred CCcEEEEeeC-------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECC
Q psy17133 16 ESTKMVTAFD-------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNV 83 (116)
Q Consensus 16 ~~~~l~~~~~-------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~ 83 (116)
++..++.|+. ...+.+||..+++....-..... ......+. .++++++.++.+ ..+.+||++
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR----RSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc----cccccEEE--ECCEEEEECCCCCCcccceEEEEeCC
Confidence 3455565543 24588899876653322111100 11122222 256666666653 468899998
Q ss_pred CCeEEE
Q psy17133 84 SGKLVH 89 (116)
Q Consensus 84 ~~~~~~ 89 (116)
+.+-..
T Consensus 229 ~~~W~~ 234 (302)
T 2xn4_A 229 TNAWRQ 234 (302)
T ss_dssp TTEEEE
T ss_pred CCCEee
Confidence 776543
No 337
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.13 E-value=2.6 Score=24.63 Aligned_cols=67 Identities=9% Similarity=-0.029 Sum_probs=35.4
Q ss_pred CCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q psy17133 16 ESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVSG 85 (116)
Q Consensus 16 ~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 85 (116)
++..++.|+.+ ..+.+||..+.+... +..... .......+.+ ++++++.++.+ ..+.+||+.+.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRM-ITAMNT---IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEE-CCCCSS---CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEee-CCCCCC---ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 34566666532 458888987654322 211100 0111222222 56666666553 56899998876
Q ss_pred eEE
Q psy17133 86 KLV 88 (116)
Q Consensus 86 ~~~ 88 (116)
+-.
T Consensus 242 ~W~ 244 (308)
T 1zgk_A 242 TWT 244 (308)
T ss_dssp EEE
T ss_pred cEE
Confidence 544
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.11 E-value=2.6 Score=24.67 Aligned_cols=68 Identities=9% Similarity=-0.036 Sum_probs=35.7
Q ss_pred CCcEEEEeeC------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-----eEEEEECCC
Q psy17133 16 ESTKMVTAFD------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-----HIRFFDNVS 84 (116)
Q Consensus 16 ~~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-----~i~~~~~~~ 84 (116)
++..++.|+. ...+.+||..+.+... +..... .......+. -++++++.++.++ .+.+||+.+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~---~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE-LAPMQT---ARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEE-CCCCSS---CCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEE-CCCCCC---chhceEEEE--ECCEEEEEeccCCCCccceEEEEECCC
Confidence 4466666654 2468889988664322 211100 011112222 2566666666543 588899887
Q ss_pred CeEEE
Q psy17133 85 GKLVH 89 (116)
Q Consensus 85 ~~~~~ 89 (116)
.+-..
T Consensus 222 ~~W~~ 226 (315)
T 4asc_A 222 NKWAP 226 (315)
T ss_dssp TEEEE
T ss_pred CeEEE
Confidence 75443
No 339
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=87.68 E-value=2.7 Score=24.34 Aligned_cols=68 Identities=9% Similarity=-0.060 Sum_probs=36.1
Q ss_pred CCcEEEEeeCC-----CeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEEC
Q psy17133 16 ESTKMVTAFDN-----SACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDN 82 (116)
Q Consensus 16 ~~~~l~~~~~~-----~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~ 82 (116)
++..++.|+.+ ..+.+||..+++ ....-..... ......+.+ ++++++.++.+ ..+.+||+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~----r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~ 135 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR----RGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDP 135 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC----CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC----ccceeEEEE--CCEEEEEcccCCCcccceEEEEcC
Confidence 44666666643 468899988665 3222111100 112222222 56666666543 46889998
Q ss_pred CCCeEEE
Q psy17133 83 VSGKLVH 89 (116)
Q Consensus 83 ~~~~~~~ 89 (116)
.+.+-..
T Consensus 136 ~~~~W~~ 142 (301)
T 2vpj_A 136 NIDQWSM 142 (301)
T ss_dssp TTTEEEE
T ss_pred CCCeEEE
Confidence 8776443
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=86.48 E-value=3.4 Score=24.20 Aligned_cols=56 Identities=9% Similarity=-0.078 Sum_probs=28.6
Q ss_pred CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C-----CeEEEEECCCCeEE
Q psy17133 27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D-----RHIRFFDNVSGKLV 88 (116)
Q Consensus 27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d-----~~i~~~~~~~~~~~ 88 (116)
..+.+||..+++....-..... .... ++. ..++++++.++. + ..+.+||+.+.+-.
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~----r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 178 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYV----VYGH-TVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWK 178 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSC----CBSC-EEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTEEE
T ss_pred ceEEEECCCCCcEeECCCCCCc----ccce-eEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCeEE
Confidence 4588888876643221111100 1111 222 235566666665 2 46899998876543
No 341
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=86.00 E-value=4.5 Score=25.11 Aligned_cols=85 Identities=13% Similarity=0.071 Sum_probs=56.0
Q ss_pred CeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEc---CC----CCEEEEEe-CCCeEEEEECCCCeEEEEee----
Q psy17133 27 SACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCH---PT----LPLTITAH-DDRHIRFFDNVSGKLVHSMV---- 92 (116)
Q Consensus 27 ~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~---~~----~~~~~~~~-~d~~i~~~~~~~~~~~~~~~---- 92 (116)
.+|.+||+.+. +.++.+.-........+.+..+.+. |+ +.+++... ...-|.++|+.+++..+.+.
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 36889999998 8888876543322224567888887 22 23444333 46789999999988766552
Q ss_pred cc--------------cccEEEEEECCC----CcEEE
Q psy17133 93 AH--------------LDAVTSLAVDPQ----GLYIL 111 (116)
Q Consensus 93 ~~--------------~~~v~~~~~~~~----~~~l~ 111 (116)
.. ...+..|+.+|+ +++|.
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LY 239 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAY 239 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEE
Confidence 10 136788888987 67665
No 342
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=85.29 E-value=3.3 Score=28.08 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=25.1
Q ss_pred CcEEEEeeCCCeEEEEECCCCceeEEEec
Q psy17133 17 STKMVTAFDNSACVLFDLETGKPVVRIDS 45 (116)
Q Consensus 17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~ 45 (116)
..++++-+.|+++++|++.+++.+....-
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 47999999999999999999987776654
No 343
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=84.91 E-value=5.9 Score=25.52 Aligned_cols=72 Identities=17% Similarity=0.107 Sum_probs=50.5
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
-+-++..++ .-..+..-...|.+++||++++..+..-+-. ...+...+-+....-++....+|.|.-..+..
T Consensus 260 FPvamqvs~-kygviyviTK~G~i~lyDleTgt~i~~nrIs------~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 260 FPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRIS------GETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp CEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred ceeEEEecc-cCCEEEEEecCceEEEEecccceeeeeeccc------CCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 345667776 5567777788999999999999988776655 34566555555555666666777776666544
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.83 E-value=2.4 Score=25.81 Aligned_cols=67 Identities=10% Similarity=0.159 Sum_probs=42.1
Q ss_pred eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeE---EEE-c----CCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 24 FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINR---VVC-H----PTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 24 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~-~----~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
+.+|.++.++..+|.....+...... ...++.. ..+ . ..+..+++++.++.+...|..+|+.+..+.
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv--~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLV--STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHH--TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred CCCCEEEEEECCCCcEEeeeccccce--eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 57999999998877554444322100 0111111 000 0 134577889999999999999999998876
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=84.82 E-value=4.3 Score=23.83 Aligned_cols=68 Identities=10% Similarity=0.029 Sum_probs=34.1
Q ss_pred CCcEEEEeeCC-------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC------CCeEEEEEC
Q psy17133 16 ESTKMVTAFDN-------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------DRHIRFFDN 82 (116)
Q Consensus 16 ~~~~l~~~~~~-------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------d~~i~~~~~ 82 (116)
++..++.|+.+ ..+.+||..+.+....-..... .... ++. ..++++++.++. -..+.+||+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK----VYGH-NVI-SHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC----EESC-EEE-EETTEEEEECCEESSSCBCCCEEEEET
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc----cccc-EEE-EECCEEEEEcCCCCCCCccceEEEEcC
Confidence 33555555532 3477888876543322111100 1111 122 245666666553 245899999
Q ss_pred CCCeEEE
Q psy17133 83 VSGKLVH 89 (116)
Q Consensus 83 ~~~~~~~ 89 (116)
.+.+-..
T Consensus 183 ~~~~W~~ 189 (318)
T 2woz_A 183 KKGDWKD 189 (318)
T ss_dssp TTTEEEE
T ss_pred CCCEEEE
Confidence 8776443
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=83.74 E-value=4.8 Score=23.60 Aligned_cols=67 Identities=7% Similarity=-0.009 Sum_probs=34.2
Q ss_pred CCcEEEEeeC------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCC
Q psy17133 16 ESTKMVTAFD------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVS 84 (116)
Q Consensus 16 ~~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~ 84 (116)
++..++.|+. ...+.+||..+.+....-..... ......+. -++++++.++.+ ..+.+||+.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP----RSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC----cccceEEE--ECCEEEEEcCcCCCCccceEEEEECCC
Confidence 4456666653 24588999887653322111100 11112222 256666666542 3577889887
Q ss_pred CeEE
Q psy17133 85 GKLV 88 (116)
Q Consensus 85 ~~~~ 88 (116)
.+-.
T Consensus 232 ~~W~ 235 (318)
T 2woz_A 232 NKWE 235 (318)
T ss_dssp CCEE
T ss_pred CeEE
Confidence 6543
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.49 E-value=5.7 Score=24.21 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=43.6
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE--cC-CCCEEEEE-eCCCeEEEEECCCCeEEEEe
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC--HP-TLPLTITA-HDDRHIRFFDNVSGKLVHSM 91 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~~~~~~~-~~d~~i~~~~~~~~~~~~~~ 91 (116)
..+++++.|+.++-+|..+|+.+-.++... ...+....- .+ ++..++.. ..||.+..++..+|.....+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~-----~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN-----FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL 83 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGG-----SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCc-----cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence 578889999999999999999888886541 011111110 01 22233333 57899988888877554433
No 348
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=83.14 E-value=5 Score=23.29 Aligned_cols=68 Identities=10% Similarity=-0.021 Sum_probs=35.2
Q ss_pred CCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q psy17133 16 ESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVSG 85 (116)
Q Consensus 16 ~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 85 (116)
++..++.|+.+ ..+.+||..+.+....-..... ......+. .++++++.++.+ ..+.+||+.+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 134 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR----RSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSN 134 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTT
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc----ccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCC
Confidence 34666666533 3588889876653222111100 11122222 256666666644 35788888876
Q ss_pred eEEE
Q psy17133 86 KLVH 89 (116)
Q Consensus 86 ~~~~ 89 (116)
+-..
T Consensus 135 ~W~~ 138 (302)
T 2xn4_A 135 EWFH 138 (302)
T ss_dssp EEEE
T ss_pred eEee
Confidence 5443
No 349
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=81.53 E-value=6 Score=23.11 Aligned_cols=67 Identities=7% Similarity=-0.054 Sum_probs=34.2
Q ss_pred CCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q psy17133 16 ESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVSG 85 (116)
Q Consensus 16 ~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 85 (116)
++..++.|+. ...+.+||..+.+....-..... ......+.+ ++++++.++.+ ..+.+||+.+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR----RIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC----CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc----ccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 3455666542 24578888876543221111100 111222222 56666666543 46888998876
Q ss_pred eEE
Q psy17133 86 KLV 88 (116)
Q Consensus 86 ~~~ 88 (116)
+-.
T Consensus 195 ~W~ 197 (308)
T 1zgk_A 195 EWR 197 (308)
T ss_dssp EEE
T ss_pred eEe
Confidence 543
No 350
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=80.47 E-value=6.4 Score=22.75 Aligned_cols=96 Identities=9% Similarity=-0.078 Sum_probs=54.7
Q ss_pred eEEEEccCCCcEEEEeeCCCeEEEEECCCCcee-----EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPV-----VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN 82 (116)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~ 82 (116)
.++.|.| ++.+.++ .++.|+.++..+.... ....+... -..+..+.+.|+|.+.+.. ++.+.-...
T Consensus 91 ~a~~fD~-~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~g----w~~~~~lff~p~G~Lyav~--dg~lyr~~~ 161 (236)
T 1tl2_A 91 QFLFFDP-NGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGG----WSGFKFLFFHPNGYLYAVH--GQQFYKALP 161 (236)
T ss_dssp SEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSS----GGGEEEEEECTTSCEEEEE--TTEEEEECC
T ss_pred eEEEECC-CCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCC----CCceEEEEECCCceEEEEe--CCcEEecCC
Confidence 5778888 7777776 4689988886432111 11111100 2468999999999877777 666544333
Q ss_pred CCCe------EEEEee-cccccEEEEEECCCCcEEEe
Q psy17133 83 VSGK------LVHSMV-AHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 83 ~~~~------~~~~~~-~~~~~v~~~~~~~~~~~l~~ 112 (116)
.++. ....+. ......+-+.|.+++...+.
T Consensus 162 P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v 198 (236)
T 1tl2_A 162 PVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGV 198 (236)
T ss_dssp CSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEE
T ss_pred CCCCCcccccccceeccCCcceEEEEEECCCCcEEEE
Confidence 3211 111111 22234455678888877654
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=74.39 E-value=11 Score=22.35 Aligned_cols=84 Identities=6% Similarity=-0.019 Sum_probs=43.5
Q ss_pred EEccCCCcEEEEeeCC--------------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----
Q psy17133 11 DFVRDESTKMVTAFDN--------------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH---- 72 (116)
Q Consensus 11 ~~~~~~~~~l~~~~~~--------------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---- 72 (116)
-+++ ++++|...... ..|+..++...+ ...+... ....+++++..|+-..
T Consensus 59 ~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~-~~~l~~~----------~~~~~s~~g~~Iy~~~~~~~ 126 (302)
T 3s25_A 59 YINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG-STVLDPD----------PCIYASLIGNYIYYLHYDTQ 126 (302)
T ss_dssp EEEE-CSSEEEEEEECC------CCSSCCSEEEEEEETTSCC-CEEEECS----------CEEEEEEETTEEEEEEESSS
T ss_pred eEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc-ceEeecC----------CccEEEEeCCEEEEEeecCC
Confidence 3466 56777666532 356667776443 2333222 1225677888777665
Q ss_pred CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133 73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 111 (116)
....|...++...... .+..+.. ..++++++.|+
T Consensus 127 ~~~~Iy~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy 160 (302)
T 3s25_A 127 TATSLYRIRIDGEEKK-KIKNHYL----FTCNTSDRYFY 160 (302)
T ss_dssp SCEEEEEEETTSCCCE-EEESSCC----CCSEEETTEEE
T ss_pred CCceEEEEECCCCCeE-EEeCCCc----eEeeEECCEEE
Confidence 3445666666643333 3322221 33455666554
No 352
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=63.51 E-value=40 Score=24.49 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=42.6
Q ss_pred cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC------CCEEEEEeC-CCeEEEEECCCCeEEEE
Q psy17133 18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT------LPLTITAHD-DRHIRFFDNVSGKLVHS 90 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~-d~~i~~~~~~~~~~~~~ 90 (116)
.+++.+. ++.+.++.+..++. ........ ...+.++++.|. ..+++.+.+ |++++++++.+.+.+..
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L-~~~~~~~l----~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~ 597 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQEL-RQISHTEM----EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHK 597 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEE-EEEEEEEC----SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CEEEEEE-CCEEEEEEeeCCce-eeecccCC----CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEE
Confidence 3454444 56777777665432 22211111 357899998763 368899987 99999999987665543
No 353
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=63.31 E-value=47 Score=25.28 Aligned_cols=71 Identities=17% Similarity=0.119 Sum_probs=41.6
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS 84 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 84 (116)
+.++..++ .-..+..-+..|.+++||+.++..+..-+.. ...|...+-+....-++.....|.|.-..+..
T Consensus 261 pv~~~vs~-k~g~iy~itk~G~~~~~d~~t~~~i~~~ris------~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 261 PVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRIS------GETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred ceEEEecc-ccCEEEEEecCceEEEEecccchhhhhcccc------CCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 44555666 4456666778899999999998876544433 23444444343333444444556555555443
No 354
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=60.73 E-value=35 Score=22.95 Aligned_cols=69 Identities=10% Similarity=0.038 Sum_probs=37.3
Q ss_pred CCcEEEEeeCC------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC--eEEEEECCCCeE
Q psy17133 16 ESTKMVTAFDN------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR--HIRFFDNVSGKL 87 (116)
Q Consensus 16 ~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~~ 87 (116)
++..++.|+.+ ..+.+||..+.+....-.... ...-.+.+.-.++++++.|+.++ .+.+||+.+.+-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~-----~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH-----TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB-----CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC-----CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 34566666532 357788887654322111110 11112333324777777776543 689999987764
Q ss_pred EE
Q psy17133 88 VH 89 (116)
Q Consensus 88 ~~ 89 (116)
..
T Consensus 526 ~~ 527 (695)
T 2zwa_A 526 KD 527 (695)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 355
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=51.86 E-value=16 Score=20.34 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=22.9
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK 38 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~ 38 (116)
+.+.++.|......-+++...++++.++|.+-|+
T Consensus 119 ~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 119 KHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred ceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 3355667765333456666778999999998654
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=49.70 E-value=57 Score=22.05 Aligned_cols=97 Identities=8% Similarity=0.095 Sum_probs=61.5
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------C-----CCCce--eEEEEc---CCCCEEEEEeC-
Q psy17133 19 KMVTAFDNSACVLFDLETGKPVVRIDSSQFGV--------------S-----GGGGI--NRVVCH---PTLPLTITAHD- 73 (116)
Q Consensus 19 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~--------------~-----~~~~i--~~~~~~---~~~~~~~~~~~- 73 (116)
.+.+|+..|+++++-+.+++.+..+..-.... . ..+.. ..+.+. -||++++.-..
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 35677789999999999999888776432210 0 00111 122222 26777777654
Q ss_pred CCeEEEEECCCCeEEEEee-cccccEEEEEEC--CCCcEEEeeec
Q psy17133 74 DRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVD--PQGLYILSGTY 115 (116)
Q Consensus 74 d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~s~ 115 (116)
+..|-..+++..+.-+.+. ...+.+..+.|- |.-.+++.++.
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e 196 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAE 196 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEEC
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecce
Confidence 5678888888877766554 345567778885 67778877654
No 357
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=47.77 E-value=61 Score=21.83 Aligned_cols=95 Identities=12% Similarity=0.059 Sum_probs=54.1
Q ss_pred ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
|.++...+ ++..|..+.. +-+..++..+++.. .+..-. ...|.++....++.+.+.. .+ =+.+++..+++
T Consensus 193 i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~~~-~~~~l~-----~~~i~~i~~d~~g~lWigT-~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 193 VNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQIK-QTEAFH-----NNSIKSLALDGNGDLLAGT-DN-GLYVYHNDTTP 262 (758)
T ss_dssp EEEEEEET-TTTEEEEEEE-EEEEEEETTTTEEE-EEEEEE-----EEEEEEEEECTTCCEEEEE-TT-EEEEECCTTSC
T ss_pred eEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCeEE-eccCCC-----CCeEEEEEEcCCCCEEEEe-CC-ceeEEecCCCc
Confidence 56666655 4454444443 46888888765432 221110 2357888888888766544 34 47778877655
Q ss_pred EEEEeec-------ccccEEEEEECCCCcEEE
Q psy17133 87 LVHSMVA-------HLDAVTSLAVDPQGLYIL 111 (116)
Q Consensus 87 ~~~~~~~-------~~~~v~~~~~~~~~~~l~ 111 (116)
....... ....|.++...++|.+.+
T Consensus 263 ~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 294 (758)
T 3ott_A 263 LQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL 294 (758)
T ss_dssp CEEECCCTTCTTSCSCSCEEEEEECTTCCEEE
T ss_pred EEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE
Confidence 4332210 123578888777776554
No 358
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=43.90 E-value=56 Score=20.28 Aligned_cols=67 Identities=15% Similarity=0.251 Sum_probs=44.2
Q ss_pred CCC--eEEEEECCCCceeEEEecCCcCcCCCCce-eEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133 25 DNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGI-NRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV 92 (116)
Q Consensus 25 ~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 92 (116)
... .+.++|+.+++.+..+.-...+...-+.+ .++.+....+++++.-....|.+++.+ |+.+..+.
T Consensus 48 ~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~-G~~~~k~~ 117 (369)
T 3s9j_A 48 QKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQ-GEIIRNYN 117 (369)
T ss_dssp STTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTT-CCEEEEEE
T ss_pred CCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCC-ceEEEEEe
Confidence 456 89999999999888776554332112334 345555667777777666778888865 66655543
No 359
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=41.77 E-value=79 Score=21.35 Aligned_cols=70 Identities=9% Similarity=-0.002 Sum_probs=38.3
Q ss_pred CCcEEEEeeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeC--C-----CeEEEEECCCC
Q psy17133 16 ESTKMVTAFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHD--D-----RHIRFFDNVSG 85 (116)
Q Consensus 16 ~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~--d-----~~i~~~~~~~~ 85 (116)
++..++.|+.++ .+.+||..+.+... +...............+.+..+ +++++.|+. + +.+..||+.+.
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~-~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKD-VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEE-CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEE-ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 456777776433 68999998765322 2210000000122233555555 666666654 2 46889998877
Q ss_pred e
Q psy17133 86 K 86 (116)
Q Consensus 86 ~ 86 (116)
.
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 6
No 360
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=39.87 E-value=58 Score=19.32 Aligned_cols=15 Identities=13% Similarity=0.186 Sum_probs=11.1
Q ss_pred CeEEEEECCCCeEEE
Q psy17133 75 RHIRFFDNVSGKLVH 89 (116)
Q Consensus 75 ~~i~~~~~~~~~~~~ 89 (116)
..+.+||+.+.+-..
T Consensus 168 ~~v~~yd~~~~~W~~ 182 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSY 182 (357)
T ss_dssp CEEEEEETTTTEEEE
T ss_pred ccEEEEeCCCCcEEE
Confidence 579999998776543
No 361
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=37.59 E-value=83 Score=20.45 Aligned_cols=57 Identities=5% Similarity=-0.097 Sum_probs=34.1
Q ss_pred EEEEeeCCCeEEEEECC-CCc-------eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 19 KMVTAFDNSACVLFDLE-TGK-------PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 19 ~l~~~~~~~~v~i~~~~-~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
.+..|..+|.|.-.-.. .+. .+.++..... ...|..+.++++...|+.++.++.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~----~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFRE----PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSS----CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCC----CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 45667778876644432 111 2223332111 356889999999888988887766554
No 362
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=37.58 E-value=96 Score=21.12 Aligned_cols=59 Identities=12% Similarity=0.068 Sum_probs=34.8
Q ss_pred CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcC-CCCceeEEEEcCC
Q psy17133 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVS-GGGGINRVVCHPT 64 (116)
Q Consensus 5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~ 64 (116)
+.|..+.++|.+...++++...+.|+..+-. ++.-..+........ ....+..++++|.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~dp~ 82 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIATDPV 82 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEECSS
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEeCCC
Confidence 3899999999666777777766777666533 433233322100000 0135889999984
No 363
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=35.83 E-value=1e+02 Score=21.02 Aligned_cols=27 Identities=4% Similarity=-0.091 Sum_probs=22.0
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 53 GGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
...|..+.++++...|+.++.++.+++
T Consensus 469 ~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 469 PTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 456889999999999999988776655
No 364
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=35.69 E-value=94 Score=20.47 Aligned_cols=58 Identities=5% Similarity=-0.057 Sum_probs=33.6
Q ss_pred cEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCcee-EEEEcCCCCEEEEEeCCCeEEE
Q psy17133 18 TKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGIN-RVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
..+..|..+|.|.-..+... ....++..... ...|. .+.+++++..|+.++.++.+++
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~----~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKD----GSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTT----CCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecC----CCccccceEEccCCCeEEEEecccccee
Confidence 35666778888765444322 12333332210 23564 7888998888888877655544
No 365
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae}
Probab=35.44 E-value=53 Score=17.53 Aligned_cols=37 Identities=11% Similarity=0.185 Sum_probs=21.4
Q ss_pred ceEEEEccCCCcEEEEeeCCC----eEEEEECCCCceeEEE
Q psy17133 7 PTSIDFVRDESTKMVTAFDNS----ACVLFDLETGKPVVRI 43 (116)
Q Consensus 7 v~~~~~~~~~~~~l~~~~~~~----~v~i~~~~~~~~~~~~ 43 (116)
+.++.|.-+++..+..|+.+. ..-.|++..++.+..+
T Consensus 95 ilaltF~~~dGS~v~~GSK~ya~~~~~e~f~vP~G~~I~~i 135 (152)
T 4gx7_A 95 LVALTFTYQDGRQQTVGSKAYVTNAHEDRFDLPDAAKITQL 135 (152)
T ss_dssp EEEEEEEETTSCEEEEECSTTEEEEEEEEEECCTTCCEEEE
T ss_pred EEEEEEEEcCCcEEEEecccccccccceeEECCCCCeEEEE
Confidence 556677666777777777654 2334555555544444
No 366
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=31.04 E-value=68 Score=17.43 Aligned_cols=32 Identities=9% Similarity=0.112 Sum_probs=23.3
Q ss_pred ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133 55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGK 86 (116)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 86 (116)
.+.-+.|.|++.+.+.+...|...=.|+..++
T Consensus 111 GlEp~eF~p~~~w~a~~~esG~f~dvDLse~e 142 (164)
T 1zso_A 111 GIELIDFFPSNNFIVEDTKGKLYYDVNLSDQN 142 (164)
T ss_dssp SEEEEEECCCSCEEEEETTSCEEEEECCTTSC
T ss_pred CeeeEEEecCCcEEEEECCCCcEEeeecCCCc
Confidence 46678999999999988777744446666554
No 367
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=30.84 E-value=1.2e+02 Score=20.42 Aligned_cols=102 Identities=16% Similarity=0.095 Sum_probs=53.7
Q ss_pred CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133 6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG 85 (116)
Q Consensus 6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 85 (116)
.|.++.... ++...+ +.. +-+..++..+++. ..+............|.++...+++..+..+.. +-+..++..++
T Consensus 147 ~i~~i~~d~-~g~lWi-gt~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 147 TIYSIIRTK-DNQIYV-GTY-NGLCRYIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp CEEEEEECT-TCCEEE-EET-TEEEEEETTTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred eEEEEEEcC-CCCEEE-EeC-CCHhhCccCCCce-EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 456666555 444444 443 3577888765543 222211000000224778877777654433443 35778888776
Q ss_pred eEEEEeecccccEEEEEECCCCcEEEe
Q psy17133 86 KLVHSMVAHLDAVTSLAVDPQGLYILS 112 (116)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~~~~~l~~ 112 (116)
+...........|.++...+++.+.+.
T Consensus 222 ~~~~~~~l~~~~i~~i~~d~~g~lWig 248 (758)
T 3ott_A 222 QIKQTEAFHNNSIKSLALDGNGDLLAG 248 (758)
T ss_dssp EEEEEEEEEEEEEEEEEECTTCCEEEE
T ss_pred eEEeccCCCCCeEEEEEEcCCCCEEEE
Confidence 543322212345777877777776553
No 368
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=27.49 E-value=38 Score=23.04 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=22.8
Q ss_pred eeEEE-EcCCCCEEEE-EeCC----CeEEEEECCCCeEE
Q psy17133 56 INRVV-CHPTLPLTIT-AHDD----RHIRFFDNVSGKLV 88 (116)
Q Consensus 56 i~~~~-~~~~~~~~~~-~~~d----~~i~~~~~~~~~~~ 88 (116)
...+. ++|+++.++. .+.. ..++++|+.+++.+
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~ 169 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV 169 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC
Confidence 44555 8899875544 3332 46999999999875
No 369
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=25.71 E-value=1.7e+02 Score=20.25 Aligned_cols=67 Identities=12% Similarity=0.004 Sum_probs=38.5
Q ss_pred CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-CCCCceeEEEEcCCC-CEEEEE
Q psy17133 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-SGGGGINRVVCHPTL-PLTITA 71 (116)
Q Consensus 4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~-~~~~~~ 71 (116)
.+.|.++.++|.+...++++...+.|...+- .++.-..+....... -....+..++++|.. ..++.+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 4689999999966777777777777666553 344333322210000 002358899999853 344443
No 370
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=21.03 E-value=2e+02 Score=19.42 Aligned_cols=58 Identities=5% Similarity=-0.051 Sum_probs=33.3
Q ss_pred cEEEEeeCCCeEEEEECCCCc----e--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133 18 TKMVTAFDNSACVLFDLETGK----P--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79 (116)
Q Consensus 18 ~~l~~~~~~~~v~i~~~~~~~----~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~ 79 (116)
..+..|..+|.|.-.-..... . +.++..-.. ...+..+.++++...++.++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~----~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRR----AAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSS----CCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCC----CCceeeEEEcCCCCEEEEEecceEEEc
Confidence 355667777777644332211 1 222321111 346888999998888888876655554
No 371
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=20.28 E-value=84 Score=16.08 Aligned_cols=13 Identities=15% Similarity=0.174 Sum_probs=9.6
Q ss_pred EEEECCCCcEEEe
Q psy17133 100 SLAVDPQGLYILS 112 (116)
Q Consensus 100 ~~~~~~~~~~l~~ 112 (116)
-+.|+++|+.++.
T Consensus 36 iI~W~~~G~sFvV 48 (125)
T 2ldu_A 36 LICWSPSGNSFHV 48 (125)
T ss_dssp TEEECTTSSEEEE
T ss_pred EEEEcCCCCEEEE
Confidence 3789998887654
Done!