Your job contains 1 sequence.
>psy17133
MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVV
CHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17133
(116 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0044323 - symbol:Cka "Connector of kinase to AP-1"... 363 1.8e-32 1
MGI|MGI:2151064 - symbol:Strn3 "striatin, calmodulin bind... 354 2.1e-31 1
RGD|621827 - symbol:Strn3 "striatin, calmodulin binding p... 353 2.7e-31 1
UNIPROTKB|A5D7H2 - symbol:STRN3 "Striatin-3" species:9913... 353 2.8e-31 1
UNIPROTKB|F1NH54 - symbol:STRN3 "Uncharacterized protein"... 353 2.9e-31 1
UNIPROTKB|Q13033 - symbol:STRN3 "Striatin-3" species:9606... 352 3.5e-31 1
ZFIN|ZDB-GENE-070112-1172 - symbol:zgc:158357 "zgc:158357... 318 1.6e-27 1
UNIPROTKB|E1C837 - symbol:STRN "Uncharacterized protein" ... 316 2.7e-27 1
MGI|MGI:1333757 - symbol:Strn "striatin, calmodulin bindi... 314 4.2e-27 1
UNIPROTKB|E1BFB3 - symbol:STRN "Uncharacterized protein" ... 311 8.8e-27 1
RGD|3782 - symbol:Strn "striatin, calmodulin binding prot... 311 8.8e-27 1
UNIPROTKB|F1S4P0 - symbol:STRN "Uncharacterized protein" ... 310 1.1e-26 1
UNIPROTKB|O43815 - symbol:STRN "Striatin" species:9606 "H... 308 1.8e-26 1
MGI|MGI:2142346 - symbol:Strn4 "striatin, calmodulin bind... 305 3.7e-26 1
RGD|1307030 - symbol:Strn4 "striatin, calmodulin binding ... 300 1.3e-25 1
UNIPROTKB|Q9NRL3 - symbol:STRN4 "Striatin-4" species:9606... 298 2.0e-25 1
UNIPROTKB|F8VYA6 - symbol:STRN4 "Striatin-4" species:9606... 298 2.1e-25 1
WB|WBGene00010631 - symbol:cash-1 species:6239 "Caenorhab... 275 4.9e-23 1
DICTYBASE|DDB_G0288327 - symbol:strn "striatin" species:4... 205 2.3e-15 1
UNIPROTKB|Q70M86 - symbol:pro11 "Striatin Pro11" species:... 115 9.9e-06 1
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 100 1.2e-05 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 105 4.4e-05 1
TAIR|locus:2135393 - symbol:AT4G04940 "AT4G04940" species... 85 7.2e-05 2
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 103 0.00012 1
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 101 0.00014 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 97 0.00024 1
TAIR|locus:2154996 - symbol:AT5G66240 "AT5G66240" species... 96 0.00030 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 97 0.00052 1
ASPGD|ASPL0000060719 - symbol:AN0065 species:162425 "Emer... 93 0.00073 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 93 0.00086 1
UNIPROTKB|H0YMF9 - symbol:WDR61 "WD repeat-containing pro... 87 0.00095 1
>FB|FBgn0044323 [details] [associations]
symbol:Cka "Connector of kinase to AP-1" species:7227
"Drosophila melanogaster" [GO:0007254 "JNK cascade"
evidence=NAS;TAS] [GO:0007391 "dorsal closure"
evidence=IMP;NAS;TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0042051 "compound eye photoreceptor development"
evidence=IMP] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007254 GO:GO:0007391 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046330 GO:GO:0072686
InterPro:IPR013258 Pfam:PF08232 EMBL:AF011332
ProteinModelPortal:Q86M30 SMR:Q86M30 STRING:Q86M30 PaxDb:Q86M30
PRIDE:Q86M30 FlyBase:FBgn0044323 InParanoid:Q86M30
OrthoDB:EOG4HX3G4 ArrayExpress:Q86M30 Bgee:Q86M30 Uniprot:Q86M30
Length = 730
Score = 363 (132.8 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 69/113 (61%), Positives = 93/113 (82%)
Query: 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGG--INRVVCH 62
G P+S+DFVR+E +V A++++ C+++D ETGK VVR++++Q +SG G IN+VV H
Sbjct: 565 GVPSSVDFVRNEVDHIVVAYNSAHCIVYDTETGKQVVRLEAAQ-EMSGNTGKFINKVVSH 623
Query: 63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PTLP+TITAH+DRHIRF+DN SG LVHSMVAHL+ VTSLAVD GLY+LSG++
Sbjct: 624 PTLPITITAHEDRHIRFWDNTSGTLVHSMVAHLEPVTSLAVDAHGLYLLSGSH 676
>MGI|MGI:2151064 [details] [associations]
symbol:Strn3 "striatin, calmodulin binding protein 3"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0051721 "protein phosphatase 2A binding"
evidence=ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2151064 GO:GO:0005886 GO:GO:0005794
GO:GO:0005654 GO:GO:0000159 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032355 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0003700 GO:GO:0000122 GO:GO:0033147
InterPro:IPR013258 Pfam:PF08232 CTD:29966
GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343 OMA:IKRPSGD
OrthoDB:EOG4TMR1P HOVERGEN:HBG007117 EMBL:AF307777 IPI:IPI00229990
RefSeq:NP_443205.1 UniGene:Mm.65979 ProteinModelPortal:Q9ERG2
SMR:Q9ERG2 IntAct:Q9ERG2 STRING:Q9ERG2 PhosphoSite:Q9ERG2
PaxDb:Q9ERG2 PRIDE:Q9ERG2 Ensembl:ENSMUST00000013130 GeneID:94186
KEGG:mmu:94186 UCSC:uc007nmt.2 InParanoid:Q9ERG2 NextBio:352151
Bgee:Q9ERG2 CleanEx:MM_STRN3 Genevestigator:Q9ERG2
GermOnline:ENSMUSG00000020954 Uniprot:Q9ERG2
Length = 796
Score = 354 (129.7 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 64/113 (56%), Positives = 88/113 (77%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
+G PTS+DF+ + MVT+F+ + V++DLET + +V + S G+ INRVV H
Sbjct: 630 HGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVMLSSQVDSGLQSSNHINRVVSH 689
Query: 63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 690 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 742
>RGD|621827 [details] [associations]
symbol:Strn3 "striatin, calmodulin binding protein 3"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000159 "protein phosphatase type 2A complex" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IDA]
[GO:0032403 "protein complex binding" evidence=ISO;IDA;IPI]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051721
"protein phosphatase 2A binding" evidence=IEA;ISO] [GO:0070016
"armadillo repeat domain binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:621827 GO:GO:0005886 GO:GO:0005794 GO:GO:0005737 GO:GO:0045892
GO:GO:0043234 GO:GO:0005654 GO:GO:0000159 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403
GO:GO:0032355 GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0003700
GO:GO:0000122 GO:GO:0033147 InterPro:IPR013258 Pfam:PF08232
CTD:29966 GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343
OrthoDB:EOG4TMR1P HOVERGEN:HBG007117 EMBL:AABR03048613
EMBL:AY026526 IPI:IPI00760130 IPI:IPI00851143 RefSeq:NP_001025068.1
UniGene:Rn.8394 ProteinModelPortal:P58405 IntAct:P58405
MINT:MINT-1775849 STRING:P58405 PhosphoSite:P58405 PRIDE:P58405
Ensembl:ENSRNOT00000007509 GeneID:114520 KEGG:rno:114520
UCSC:RGD:621827 InParanoid:P58405 ArrayExpress:P58405
Genevestigator:P58405 Uniprot:P58405
Length = 794
Score = 353 (129.3 bits), Expect = 2.7e-31, P = 2.7e-31
Identities = 63/113 (55%), Positives = 88/113 (77%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
+G PTS+DF+ + MVT+F+ + +++DLET + +V + S G+ INRVV H
Sbjct: 628 HGIPTSVDFIGCDPAHMVTSFNTGSAIIYDLETSQSLVMLSSQVDSGLQSSNHINRVVSH 687
Query: 63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 688 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 740
>UNIPROTKB|A5D7H2 [details] [associations]
symbol:STRN3 "Striatin-3" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0070016 "armadillo repeat domain binding" evidence=IEA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000159 "protein phosphatase type 2A
complex" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005794 GO:GO:0005737
GO:GO:0005654 GO:GO:0000159 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0003700
GO:GO:0000122 InterPro:IPR013258 Pfam:PF08232 EMBL:BC140553
IPI:IPI00852428 RefSeq:NP_001091511.1 UniGene:Bt.56528
ProteinModelPortal:A5D7H2 Ensembl:ENSBTAT00000029119 GeneID:516375
KEGG:bta:516375 CTD:29966 GeneTree:ENSGT00520000055597
HOGENOM:HOG000236343 InParanoid:A5D7H2 OMA:IKRPSGD
OrthoDB:EOG4TMR1P NextBio:20872201 ArrayExpress:A5D7H2
Uniprot:A5D7H2
Length = 797
Score = 353 (129.3 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 64/113 (56%), Positives = 88/113 (77%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ-FGVSGGGGINRVVCH 62
+G PTS+DF+ + MVT+F+ + V++DLET + +V + S G+ INRVV H
Sbjct: 631 HGIPTSVDFIGCDPAHMVTSFNTGSTVIYDLETSQSLVMLSSQMDSGLQSSNHINRVVSH 690
Query: 63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 691 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 743
>UNIPROTKB|F1NH54 [details] [associations]
symbol:STRN3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000159 "protein
phosphatase type 2A complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051721 "protein
phosphatase 2A binding" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005794 GO:GO:0005654
GO:GO:0000159 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0003700 GO:GO:0000122 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 OMA:IKRPSGD EMBL:AADN02003354
IPI:IPI00584958 Ensembl:ENSGALT00000016143 ArrayExpress:F1NH54
Uniprot:F1NH54
Length = 811
Score = 353 (129.3 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 64/113 (56%), Positives = 88/113 (77%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
+G PTS+DF+ + MV +F+ + V++DLET + VV + S + GV IN+VV H
Sbjct: 645 HGIPTSVDFIGCDPAHMVASFNTGSTVIYDLETSQSVVMLSSQVESGVQSNNHINKVVSH 704
Query: 63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 705 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 757
>UNIPROTKB|Q13033 [details] [associations]
symbol:STRN3 "Striatin-3" species:9606 "Homo sapiens"
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005516 "calmodulin
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0030425 "dendrite" evidence=ISS] [GO:0033147 "negative
regulation of intracellular estrogen receptor signaling pathway"
evidence=ISS] [GO:0032355 "response to estradiol stimulus"
evidence=ISS] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0005737
GO:GO:0045892 GO:GO:0043234 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403
GO:GO:0032355 GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0003700
GO:GO:0000122 GO:GO:0005516 GO:GO:0051721 GO:GO:0033147
InterPro:IPR013258 Pfam:PF08232 CTD:29966 HOGENOM:HOG000236343
OMA:IKRPSGD EMBL:U17989 EMBL:AK314041 EMBL:AL049830 EMBL:BC132673
EMBL:AF243424 IPI:IPI00011461 IPI:IPI00477001 PIR:JC2522
RefSeq:NP_001077362.1 RefSeq:NP_055389.3 UniGene:Hs.401843
ProteinModelPortal:Q13033 SMR:Q13033 IntAct:Q13033 STRING:Q13033
PhosphoSite:Q13033 DMDM:223634717 PaxDb:Q13033 PRIDE:Q13033
Ensembl:ENST00000355683 Ensembl:ENST00000357479 GeneID:29966
KEGG:hsa:29966 UCSC:uc001wqu.2 UCSC:uc001wqv.2
GeneCards:GC14M031363 H-InvDB:HIX0037669 HGNC:HGNC:15720
HPA:HPA003392 HPA:HPA004636 MIM:614766 neXtProt:NX_Q13033
PharmGKB:PA38394 HOVERGEN:HBG007117 InParanoid:Q13033 ChiTaRS:STRN3
GenomeRNAi:29966 NextBio:52695 ArrayExpress:Q13033 Bgee:Q13033
CleanEx:HS_STRN3 Genevestigator:Q13033 GermOnline:ENSG00000196792
Uniprot:Q13033
Length = 797
Score = 352 (129.0 bits), Expect = 3.5e-31, P = 3.5e-31
Identities = 64/113 (56%), Positives = 88/113 (77%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
+G PTS+DF+ + MVT+F+ + V++DLET + +V + S G+ INRVV H
Sbjct: 631 HGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVILSSQVDSGLQSNNHINRVVSH 690
Query: 63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 691 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 743
>ZFIN|ZDB-GENE-070112-1172 [details] [associations]
symbol:zgc:158357 "zgc:158357" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-070112-1172 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013258 Pfam:PF08232
EMBL:GQ131851 IPI:IPI00805985 UniGene:Dr.90294
ProteinModelPortal:C5MQH8 Uniprot:C5MQH8
Length = 782
Score = 318 (117.0 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 60/112 (53%), Positives = 83/112 (74%)
Query: 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGG-GINRVVCHP 63
G P+S+D V + MVTAF N ++++ET + ++ ++S G IN+V+ HP
Sbjct: 617 GVPSSVDVVCSDPAHMVTAFSNGRTGIYNMETRQLILELESQSAGKPDAPCQINKVLSHP 676
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
TLP+TITA +DRHIRF+DN +GKL+HSMVAHLDAVTSLAVDP GLY++SG++
Sbjct: 677 TLPITITAQEDRHIRFYDNNTGKLIHSMVAHLDAVTSLAVDPNGLYLMSGSH 728
>UNIPROTKB|E1C837 [details] [associations]
symbol:STRN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0051721
"protein phosphatase 2A binding" evidence=IEA] [GO:0070016
"armadillo repeat domain binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008285 GO:GO:0000159
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005923
InterPro:IPR013258 Pfam:PF08232 GeneTree:ENSGT00520000055597
OMA:FNMETRQ EMBL:AADN02011831 IPI:IPI00580740
Ensembl:ENSGALT00000017218 Uniprot:E1C837
Length = 800
Score = 316 (116.3 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 59/112 (52%), Positives = 85/112 (75%)
Query: 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHP 63
G P+S+D V + + MV +F+ +F++ET + ++ ++S VS INRV+ HP
Sbjct: 635 GIPSSVDLVSSDPSLMVASFNTGHTSIFNMETRQRILTLESGVDNTVSTSCQINRVISHP 694
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
TLP++ITAH+DRHI+F+DN +GKL+HSMVAHLDAVTSLAVDP GLY++SG++
Sbjct: 695 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLDAVTSLAVDPNGLYLMSGSH 746
>MGI|MGI:1333757 [details] [associations]
symbol:Strn "striatin, calmodulin binding protein"
species:10090 "Mus musculus" [GO:0005516 "calmodulin binding"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005923
"tight junction" evidence=ISO] [GO:0007626 "locomotory behavior"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0016020 "membrane" evidence=ISO] [GO:0016055 "Wnt
receptor signaling pathway" evidence=ISO] [GO:0016358 "dendrite
development" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043197
"dendritic spine" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=ISO]
[GO:0051721 "protein phosphatase 2A binding" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1333757 GO:GO:0005737 GO:GO:0008285 GO:GO:0014069
GO:GO:0000159 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045211 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016358
GO:GO:0007626 GO:GO:0005923 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343
HOVERGEN:HBG007117 CTD:6801 OMA:FNMETRQ EMBL:AJ223777 EMBL:BC090968
EMBL:BC150727 IPI:IPI00352986 RefSeq:NP_035630.2 UniGene:Mm.311915
UniGene:Mm.391038 UniGene:Mm.486430 ProteinModelPortal:O55106
SMR:O55106 IntAct:O55106 STRING:O55106 PhosphoSite:O55106
PaxDb:O55106 PRIDE:O55106 Ensembl:ENSMUST00000145910 GeneID:268980
KEGG:mmu:268980 InParanoid:B2RWV9 NextBio:392625 PMAP-CutDB:O55106
Bgee:O55106 CleanEx:MM_STRN Genevestigator:O55106
GermOnline:ENSMUSG00000024077 Uniprot:O55106
Length = 780
Score = 314 (115.6 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 58/112 (51%), Positives = 83/112 (74%)
Query: 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGG-GINRVVCHP 63
G P S+D V + + MV +F +F++ET + V+ ++S+ S INRV+ HP
Sbjct: 615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRVLTLESNVDSTSSSSCQINRVISHP 674
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct: 675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726
>UNIPROTKB|E1BFB3 [details] [associations]
symbol:STRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070016 "armadillo repeat domain binding" evidence=IEA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030331
"estrogen receptor binding" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA] [GO:0005923 "tight junction"
evidence=IEA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008285 GO:GO:0000159 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005923
InterPro:IPR013258 Pfam:PF08232 GeneTree:ENSGT00520000055597
CTD:6801 OMA:FNMETRQ EMBL:DAAA02030559 EMBL:DAAA02030560
IPI:IPI00698186 RefSeq:NP_001193033.1 UniGene:Bt.42222
ProteinModelPortal:E1BFB3 Ensembl:ENSBTAT00000024742 GeneID:537010
KEGG:bta:537010 NextBio:20877050 Uniprot:E1BFB3
Length = 780
Score = 311 (114.5 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 56/112 (50%), Positives = 83/112 (74%)
Query: 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGG-GINRVVCHP 63
G P S+D V + + MV +F +F++ET + ++ ++S+ + INRV+ HP
Sbjct: 615 GVPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNLDSTANSSCQINRVISHP 674
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct: 675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726
>RGD|3782 [details] [associations]
symbol:Strn "striatin, calmodulin binding protein" species:10116
"Rattus norvegicus" [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005923 "tight junction"
evidence=IEA;ISO] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA;ISO] [GO:0016358 "dendrite
development" evidence=IMP] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO;IPI] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0048306 "calcium-dependent protein binding"
evidence=NAS] [GO:0051721 "protein phosphatase 2A binding"
evidence=IEA;ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:3782 GO:GO:0005737 GO:GO:0008285 GO:GO:0043234
GO:GO:0014069 GO:GO:0000159 GO:GO:0016055 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045211
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016358 GO:GO:0007626 GO:GO:0005923 GO:GO:0005516 GO:GO:0048306
InterPro:IPR013258 Pfam:PF08232 HOGENOM:HOG000236343
HOVERGEN:HBG007117 CTD:6801 OrthoDB:EOG43N7C6 EMBL:X99326
IPI:IPI00188880 RefSeq:NP_062021.1 UniGene:Rn.37469
ProteinModelPortal:P70483 MINT:MINT-225992 STRING:P70483
PhosphoSite:P70483 PRIDE:P70483 GeneID:29149 KEGG:rno:29149
UCSC:RGD:3782 InParanoid:P70483 NextBio:608151 PMAP-CutDB:P70483
Genevestigator:P70483 GermOnline:ENSRNOG00000004806 Uniprot:P70483
Length = 780
Score = 311 (114.5 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 57/112 (50%), Positives = 83/112 (74%)
Query: 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCHP 63
G P S+D V + + MV +F +F++ET + ++ ++S+ S INRV+ HP
Sbjct: 615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDSTASSSCQINRVISHP 674
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct: 675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726
>UNIPROTKB|F1S4P0 [details] [associations]
symbol:STRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070016 "armadillo repeat domain binding" evidence=IEA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030331
"estrogen receptor binding" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA] [GO:0005923 "tight junction"
evidence=IEA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008285 GO:GO:0000159 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005923
InterPro:IPR013258 Pfam:PF08232 GeneTree:ENSGT00520000055597
CTD:6801 OMA:FNMETRQ EMBL:CU570644 EMBL:CU571019
RefSeq:XP_003125288.1 Ensembl:ENSSSCT00000009301 GeneID:100524371
KEGG:ssc:100524371 Uniprot:F1S4P0
Length = 780
Score = 310 (114.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 56/112 (50%), Positives = 83/112 (74%)
Query: 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGG-GINRVVCHP 63
G P S+D V + + MV +F +F++ET + ++ ++S+ + INRV+ HP
Sbjct: 615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNLDSTTNSSCQINRVISHP 674
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct: 675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726
>UNIPROTKB|O43815 [details] [associations]
symbol:STRN "Striatin" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS;NAS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0014069 "postsynaptic density" evidence=ISS]
[GO:0016358 "dendrite development" evidence=ISS] [GO:0007626
"locomotory behavior" evidence=ISS] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0005923 "tight junction" evidence=IDA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=ISS] [GO:0070830 "tight junction assembly" evidence=NAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=ISS]
[GO:0030331 "estrogen receptor binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008285
GO:GO:0043234 GO:GO:0014069 GO:GO:0016055 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403
GO:GO:0045211 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016358 GO:GO:0007626 GO:GO:0005923
GO:GO:0005516 Pathway_Interaction_DB:er_nongenomic_pathway
GO:GO:0051721 GO:GO:0070830 InterPro:IPR013258 Pfam:PF08232
HOGENOM:HOG000236343 HOVERGEN:HBG007117 EMBL:AJ223814 EMBL:AC007404
EMBL:AC007382 EMBL:BC106879 IPI:IPI00014456 IPI:IPI00654594
RefSeq:NP_003153.2 UniGene:Hs.127486 ProteinModelPortal:O43815
SMR:O43815 IntAct:O43815 STRING:O43815 PhosphoSite:O43815
PaxDb:O43815 PRIDE:O43815 Ensembl:ENST00000263918
Ensembl:ENST00000379213 GeneID:6801 KEGG:hsa:6801 UCSC:uc002rpn.3
UCSC:uc010ezx.3 CTD:6801 GeneCards:GC02M036987 HGNC:HGNC:11424
HPA:HPA017286 MIM:614765 neXtProt:NX_O43815 PharmGKB:PA36224
InParanoid:O43815 OMA:FNMETRQ OrthoDB:EOG43N7C6 PhylomeDB:O43815
GenomeRNAi:6801 NextBio:26559 PMAP-CutDB:O43815 ArrayExpress:O43815
Bgee:O43815 CleanEx:HS_STRN Genevestigator:O43815
GermOnline:ENSG00000115808 Uniprot:O43815
Length = 780
Score = 308 (113.5 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 56/112 (50%), Positives = 83/112 (74%)
Query: 5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGG-GINRVVCHP 63
G P S+D V + + MV +F +F++ET + ++ ++S+ + INRV+ HP
Sbjct: 615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHP 674
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct: 675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726
>MGI|MGI:2142346 [details] [associations]
symbol:Strn4 "striatin, calmodulin binding protein 4"
species:10090 "Mus musculus" [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0051721 "protein phosphatase 2A binding"
evidence=ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2142346 GO:GO:0005737 GO:GO:0043234
GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343
HOVERGEN:HBG007117 CTD:29888 EMBL:AF414080 EMBL:AC148981
EMBL:BC004025 EMBL:BC080283 IPI:IPI00119524 IPI:IPI01008021
RefSeq:NP_001034967.1 RefSeq:NP_598550.2 UniGene:Mm.21612
ProteinModelPortal:P58404 SMR:P58404 PhosphoSite:P58404
PaxDb:P58404 PRIDE:P58404 Ensembl:ENSMUST00000019220
Ensembl:ENSMUST00000108495 GeneID:97387 KEGG:mmu:97387
UCSC:uc009fif.2 InParanoid:P58404 OMA:RPHEGSF OrthoDB:EOG4R23TB
NextBio:352759 Bgee:P58404 CleanEx:MM_STRN4 Genevestigator:P58404
GermOnline:ENSMUSG00000030374 Uniprot:P58404
Length = 760
Score = 305 (112.4 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 61/112 (54%), Positives = 80/112 (71%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
+G PTS+ F E +V +F + VL+DLE G ++ ++S G SG IN+VV HP
Sbjct: 597 HGIPTSVAFTSTEPAHVVASFRSGDTVLYDLEAGSALLTLESR--GSSGPAQINQVVSHP 654
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
+ PLTITAHDDR IRF DN +GK VHSMVAHLDAVT LAVDP G++++SG++
Sbjct: 655 SQPLTITAHDDRGIRFLDNRTGKSVHSMVAHLDAVTCLAVDPNGVFLMSGSH 706
>RGD|1307030 [details] [associations]
symbol:Strn4 "striatin, calmodulin binding protein 4"
species:10116 "Rattus norvegicus" [GO:0008150 "biological_process"
evidence=ND] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0032403 "protein complex binding"
evidence=ISO;IPI] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0051721 "protein
phosphatase 2A binding" evidence=ISO] [GO:0070016 "armadillo repeat
domain binding" evidence=ISO] [GO:0000159 "protein phosphatase type
2A complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307030 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258
Pfam:PF08232 GeneTree:ENSGT00520000055597 CTD:29888 OMA:RPHEGSF
IPI:IPI00213355 RefSeq:NP_001100950.2 UniGene:Rn.137083
ProteinModelPortal:F1M6V8 PRIDE:F1M6V8 Ensembl:ENSRNOT00000021976
GeneID:308392 KEGG:rno:308392 UCSC:RGD:1307030 NextBio:658751
ArrayExpress:F1M6V8 Uniprot:F1M6V8
Length = 759
Score = 300 (110.7 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 61/112 (54%), Positives = 79/112 (70%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
+G PTS+ F E +V +F + VL+DLE G ++ ++S G SG IN+VV HP
Sbjct: 596 HGIPTSVAFTSTEPAHVVASFRSGDTVLYDLEAGGALLTLESR--GSSGPTQINQVVSHP 653
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PLTITAHDDR IRF DN +GK VHSMVAHLDAVT LAVDP G++++SG++
Sbjct: 654 NQPLTITAHDDRGIRFLDNRTGKSVHSMVAHLDAVTCLAVDPNGVFLMSGSH 705
>UNIPROTKB|Q9NRL3 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0051721 "protein phosphatase 2A
binding" evidence=IDA] [GO:0000159 "protein phosphatase type 2A
complex" evidence=IDA] [GO:0070016 "armadillo repeat domain
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005516 GO:GO:0051721
InterPro:IPR013258 Pfam:PF08232 HOGENOM:HOG000236343
HOVERGEN:HBG007117 EMBL:AF212940 EMBL:BC004910 EMBL:BC034604
IPI:IPI00003016 RefSeq:NP_001034966.1 RefSeq:NP_037535.2
UniGene:Hs.631590 ProteinModelPortal:Q9NRL3 SMR:Q9NRL3
IntAct:Q9NRL3 MINT:MINT-1371553 STRING:Q9NRL3 PhosphoSite:Q9NRL3
DMDM:152031693 PaxDb:Q9NRL3 PRIDE:Q9NRL3 Ensembl:ENST00000263280
GeneID:29888 KEGG:hsa:29888 UCSC:uc002pfl.3 CTD:29888
GeneCards:GC19M047222 H-InvDB:HIX0096898 HGNC:HGNC:15721
HPA:HPA043527 MIM:614767 neXtProt:NX_Q9NRL3 PharmGKB:PA134863218
PhylomeDB:Q9NRL3 ChiTaRS:STRN4 GenomeRNAi:29888 NextBio:52431
PMAP-CutDB:Q9NRL3 ArrayExpress:Q9NRL3 Bgee:Q9NRL3 CleanEx:HS_STRN4
Genevestigator:Q9NRL3 GermOnline:ENSG00000090372 Uniprot:Q9NRL3
Length = 753
Score = 298 (110.0 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 60/112 (53%), Positives = 78/112 (69%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
+G PTS+ F E +V +F + VL+D+E G ++ ++S G SG IN+VV HP
Sbjct: 590 HGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESR--GSSGPTQINQVVSHP 647
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PLTITAHDDR IRF DN +GK VHSMVAHLDAVT LAVDP G +++SG++
Sbjct: 648 NQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSH 699
>UNIPROTKB|F8VYA6 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0043197
"dendritic spine" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
EMBL:AC008622 EMBL:AC008635 RefSeq:NP_001034966.1 UniGene:Hs.631590
GeneID:29888 KEGG:hsa:29888 CTD:29888 HGNC:HGNC:15721 ChiTaRS:STRN4
GenomeRNAi:29888 NextBio:52431 OMA:RPHEGSF IPI:IPI00741970
ProteinModelPortal:F8VYA6 SMR:F8VYA6 PRIDE:F8VYA6
Ensembl:ENST00000391910 UCSC:uc002pfm.3 ArrayExpress:F8VYA6
Bgee:F8VYA6 Uniprot:F8VYA6
Length = 760
Score = 298 (110.0 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 60/112 (53%), Positives = 78/112 (69%)
Query: 4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
+G PTS+ F E +V +F + VL+D+E G ++ ++S G SG IN+VV HP
Sbjct: 597 HGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESR--GSSGPTQINQVVSHP 654
Query: 64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PLTITAHDDR IRF DN +GK VHSMVAHLDAVT LAVDP G +++SG++
Sbjct: 655 NQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSH 706
>WB|WBGene00010631 [details] [associations]
symbol:cash-1 species:6239 "Caenorhabditis elegans"
[GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0002009 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0040035 EMBL:Z71181 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 EMBL:Z71177 PIR:T18598
RefSeq:NP_505664.2 ProteinModelPortal:G5EE12 SMR:G5EE12
IntAct:G5EE12 EnsemblMetazoa:K07C5.8 GeneID:179445
KEGG:cel:CELE_K07C5.8 CTD:179445 WormBase:K07C5.8 OMA:IRFWDNT
NextBio:905428 Uniprot:G5EE12
Length = 678
Score = 275 (101.9 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 49/110 (44%), Positives = 78/110 (70%)
Query: 7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHPTL 65
PTS+DFV E++ ++ A+ N + D++TG V+ D FG V+G +N++V HPT+
Sbjct: 514 PTSVDFVSTETSHLLAAYTNCYAQIIDIDTGSTVMVFD---FGAVTGSPTMNKIVSHPTM 570
Query: 66 PLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
PLT+ +DR IR+FDN +G ++H +AH++ V+SLA+DP GLY+LSG++
Sbjct: 571 PLTLIGGEDRTIRYFDNTNGSIIHEAIAHVEGVSSLAIDPNGLYLLSGSH 620
>DICTYBASE|DDB_G0288327 [details] [associations]
symbol:strn "striatin" species:44689 "Dictyostelium
discoideum" [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0288327 GO:GO:0005737 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000111 InterPro:IPR013258
Pfam:PF08232 RefSeq:XP_636764.1 ProteinModelPortal:Q54J37
EnsemblProtists:DDB0304999 GeneID:8626567 KEGG:ddi:DDB_G0288327
OMA:GHEDRFI ProtClustDB:CLSZ2846653 Uniprot:Q54J37
Length = 827
Score = 205 (77.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 42/111 (37%), Positives = 68/111 (61%)
Query: 7 PTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGG----INRVVC 61
PTSI E+ K++T++++ + +LFDLET + + ++ + IN++V
Sbjct: 660 PTSIALPATENNRKLLTSYNDGSILLFDLETQQIISQLKQGSSNNNNNNNNNSQINKIVS 719
Query: 62 HPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112
HP +PL +T +D I FFD S +VHSM+AH ++++SL +DP GLYI S
Sbjct: 720 HPFMPLAMTGSEDHKIEFFDLNSNTVVHSMIAHSNSISSLTIDPSGLYIAS 770
>UNIPROTKB|Q70M86 [details] [associations]
symbol:pro11 "Striatin Pro11" species:771870 "Sordaria
macrospora k-hell" [GO:0000909 "sporocarp development involved in
sexual reproduction" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016020 "membrane" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030154 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000909 InterPro:IPR013258
Pfam:PF08232 EMBL:AJ564211 EMBL:CABT02000015 RefSeq:XP_003345440.1
ProteinModelPortal:Q70M86 GeneID:10802793 KEGG:smp:SMAC_08794
Uniprot:Q70M86
Length = 845
Score = 115 (45.5 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 44 DSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLA 102
D S G +GGG R + + TI + H+DR+IRFFD SG+ ++M+AH +V+SL+
Sbjct: 721 DESGGGPTGGG---RSMAGSGVEGTIISGHEDRYIRFFDANSGQCTYNMLAHPGSVSSLS 777
Query: 103 VDPQGLYILS 112
+ P G ++S
Sbjct: 778 LSPDGRELVS 787
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 100 (40.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 54 GGINRVVC---HPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYI 110
G ++ V C HP T DR +R +DN++G+ V M H +V+SLA G Y+
Sbjct: 532 GHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYL 591
Query: 111 LSGT 114
SG+
Sbjct: 592 ASGS 595
Score = 36 (17.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 13 VRDESTKMVTAFDNSACVLFDLETGK 38
+ D+ST + F +S+ ++ L K
Sbjct: 385 ISDDSTMLACGFGDSSVRIWSLTPAK 410
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 105 (42.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 47 QFGVSGG-GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP 105
+F ++G I RV+ HP L ++A +D IR +D +G+ S+ H D+V +A D
Sbjct: 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA 160
Query: 106 QGLYILS 112
QG + S
Sbjct: 161 QGKLLAS 167
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 85 (35.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 46 SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP 105
SQ+ V G + ++V H L T DD IR +D V+ K+V H D +T L
Sbjct: 510 SQWDV--GCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSE 567
Query: 106 QGLYILSGT 114
G +++S +
Sbjct: 568 DGKWVISSS 576
Score = 46 (21.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 9 SIDFVRDESTKMVTAFDNSACV-LFDLETGKP 39
S++F+ +E M + DNS + +FD G P
Sbjct: 273 SLNFLANEPVLMSASADNSLKMWIFDTNDGDP 304
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT 68
S+DF +D T + + D + C L+D+E G+ + + + G+ V+ P
Sbjct: 393 SLDFSKDGKTLVSGSGDRTVC-LWDVEAGEQKLILHTDD-------GVTTVMFSPDGQFI 444
Query: 69 ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114
D+ IR + + SG LV + H ++V S+A P G Y++SG+
Sbjct: 445 AAGSLDKVIRIWTS-SGTLVEQLHGHEESVYSVAFSPDGKYLVSGS 489
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 101 (40.6 bits), Expect = 0.00014, P = 0.00014
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 20 MVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79
+ TA +S L+D+ T PV+ + V G IN+V C P P +++ D +R
Sbjct: 239 IATAGRDSVIKLWDMRTRIPVITL------VGHKGPINQVQCTPVDPQVVSSSTDATVRL 292
Query: 80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112
+D V+GK + + H +V + A+ P+ + S
Sbjct: 293 WDVVAGKTMKVLTHHKRSVRATALHPKEFSVAS 325
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 97 (39.2 bits), Expect = 0.00024, P = 0.00024
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 11 DFVRDESTKMV-TAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI 69
D + +K++ +A D+ ++D+E+GK V + + V G V +P L +
Sbjct: 93 DIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFG------VSFNPQSNLIV 146
Query: 70 TAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
+ D ++R +D +G+ + AH D VT + + G ++SG+Y
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSY 192
>TAIR|locus:2154996 [details] [associations]
symbol:AT5G66240 "AT5G66240" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K14962 HOGENOM:HOG000176477 OMA:CTNMAFW EMBL:AY081317
EMBL:BT002585 IPI:IPI00543245 RefSeq:NP_569031.1 UniGene:At.43477
ProteinModelPortal:Q8RXD8 SMR:Q8RXD8 IntAct:Q8RXD8 STRING:Q8RXD8
EnsemblPlants:AT5G66240.2 GeneID:836756 KEGG:ath:AT5G66240
TAIR:At5g66240 InParanoid:Q8RXD8 PhylomeDB:Q8RXD8
ProtClustDB:CLSN2687231 ArrayExpress:Q8RXD8 Genevestigator:Q8RXD8
Uniprot:Q8RXD8
Length = 331
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 35/116 (30%), Positives = 56/116 (48%)
Query: 3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC- 61
YN +SIDF + ST MVTA D+ + L+D+ + + I+S ++GV +VC
Sbjct: 32 YNCRISSIDFHKT-STCMVTASDDDSIRLYDVASATCLKTINSKKYGVD-------LVCF 83
Query: 62 --HPTLPLTITAHD-DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114
HPT + + + D +R K + H D V SL++ G +SG+
Sbjct: 84 TSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGS 139
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 97 (39.2 bits), Expect = 0.00052, P = 0.00052
Identities = 27/106 (25%), Positives = 47/106 (44%)
Query: 9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT 68
S+D+ D +V+ + ++D+E GK + + + G G + V P L
Sbjct: 374 SLDYSSD-GRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNG--VTSVAMSPDGRLV 430
Query: 69 ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114
D +R +D +G + HLD+V S+A P G + SG+
Sbjct: 431 AAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGS 476
>ASPGD|ASPL0000060719 [details] [associations]
symbol:AN0065 species:162425 "Emericella nidulans"
[GO:0030846 "termination of RNA polymerase II transcription,
poly(A)-coupled" evidence=IEA] [GO:0031126 "snoRNA 3'-end
processing" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IEA]
[GO:0034729 "histone H3-K79 methylation" evidence=IEA] [GO:0030847
"termination of RNA polymerase II transcription, exosome-dependent"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 EMBL:AACD01000003
KO:K14962 HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 OMA:CTNMAFW
RefSeq:XP_657669.1 ProteinModelPortal:Q5BHB5 STRING:Q5BHB5
EnsemblFungi:CADANIAT00002687 GeneID:2875841 KEGG:ani:AN0065.2
Uniprot:Q5BHB5
Length = 364
Score = 93 (37.8 bits), Expect = 0.00073, P = 0.00073
Identities = 29/105 (27%), Positives = 46/105 (43%)
Query: 8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL 67
TS+DF D+ +V+ D+ +FD++ GK I S ++G + R H L
Sbjct: 46 TSLDF-DDQGEFVVSCGDDEIIQIFDVKAGKMTKSIPSKKYGAH----LARFTHHSRQVL 100
Query: 68 TITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112
+ D +R D S + H D VT LA+ P ++S
Sbjct: 101 HASTKVDDSLRLLDLHSESYIRYFSGHTDKVTCLALSPGSDSVIS 145
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 93 (37.8 bits), Expect = 0.00086, P = 0.00086
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 56 INRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112
I RV+ HP + + +D I+ +D +G+L ++ H DAV +A+D G ++S
Sbjct: 109 ITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVS 165
>UNIPROTKB|H0YMF9 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AC090607 HGNC:HGNC:30300
ChiTaRS:WDR61 ProteinModelPortal:H0YMF9 SMR:H0YMF9
Ensembl:ENST00000559848 Bgee:H0YMF9 Uniprot:H0YMF9
Length = 189
Score = 87 (35.7 bits), Expect = 0.00095, P = 0.00095
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 42 RIDSSQFGVSGGG-GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH-LDAVT 99
R+D Q+ + G G+ V TLP+ ++ D HIR +D +GK + S+ A +DA T
Sbjct: 53 RLDL-QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT 111
Query: 100 SLAVDPQGLYILSGTY 115
LA P Y+ +GT+
Sbjct: 112 -LAFSPDSQYLATGTH 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 116 116 0.00091 102 3 11 22 0.45 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 524 (56 KB)
Total size of DFA: 111 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.62u 0.07s 12.69t Elapsed: 00:00:31
Total cpu time: 12.63u 0.07s 12.70t Elapsed: 00:00:32
Start: Thu Aug 15 13:13:06 2013 End: Thu Aug 15 13:13:38 2013